Citrus Sinensis ID: 020393

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
MMATTHVGFLSFGSFLPLPSRISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEEEcccccccEEEEEEcccEEEEEEcccccccHHHHHHHHHHHHHHcccccccccEEEcccccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccEEEcccccccEEEcccccEEEEEcccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEcEEcccccccccccccccccccHHccccHHHHHHHHHHccccEEEEcccccccccccEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHcccEEcccEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccEEccccccccccccccccEEEEccccccccHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mmatthvgflsfgsflplpsrisfskrrtfatlsddpiREWILSegkathitkicpvgggcinlasrygtdagsffvktnrsigpsmfegealglgamyetrtiraprpfkvgalptggsYIIMEFIefgssrgnqsVFGKKLAEMHKagksskgfgfdvdntigstpqinkwTSNWIEFYAEHRLGYQLKLALdqygdstiyqRGHRLMKNlaplfegvnvepcllhgdlwsgnissdkngepvildpacyyghneaefgmswcagfggsfynsyfevmpkqpgfekrrDLYMLYHYLNHYnlfgsgyrssaLSIIDDYLRMLKV
Flexible Loop (DISEMBL)
mmatthvgflsfgsflplpsrISFSKRRtfatlsddpIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Low Complexity Region (SEG)
MMATTHVGFLSFGSFLPLPSRISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDlymlyhylnhynlFGSGYRSSALSIIDDYLRMLKV
Disordered region (IsUnstruct)
*****HVGFLSFGSFLPLPSRISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS**********************GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM***
Disordered Region (DISOPRED)
*********LSFGSFLP********************IREWILSEGK******I*PVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Disordered Region (DISEMBL)
MMATTHVGFLSFGSFLPLPSRISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Disordered Region (DISPRO)
*MATTHVGFLSFGSFLPLPSRISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMATTHVGFLSFGSFLPLPSRISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	326	2.2.26 [Sep-21-2011]
Q9LEW8	326	Protein-ribulosamine 3-ki	yes	no	0.932	0.932	0.811	1e-149
A2XBT1	342	Protein-ribulosamine 3-ki	N/A	no	0.938	0.894	0.761	1e-141
Q10SM2	342	Protein-ribulosamine 3-ki	yes	no	0.938	0.894	0.761	1e-141
Q8K274	309	Ketosamine-3-kinase OS=Mu	yes	no	0.794	0.838	0.410	2e-57
Q9HA64	309	Ketosamine-3-kinase OS=Ho	yes	no	0.809	0.854	0.4	1e-56
P74594	295	Uncharacterized protein s	N/A	no	0.825	0.911	0.434	5e-56
Q9ER35	309	Fructosamine-3-kinase OS=	no	no	0.809	0.854	0.4	3e-54
Q9H479	309	Fructosamine-3-kinase OS=	no	no	0.809	0.854	0.393	4e-53
Q9KRU5	288	Uncharacterized protein V	yes	no	0.825	0.934	0.361	1e-40
Q87PM1	288	Uncharacterized protein V	yes	no	0.779	0.881	0.370	3e-40

>sp|Q9LEW8|FN3KR_ARATH Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=At3g61080 PE=1 SV=2

 Score =  528 bits (1360), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/307 (81%), Positives = 273/307 (88%), Gaps = 3/307 (0%)

Query: 23  SFSKRRTF---ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 79
           +FS R  F   A +S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20  NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query: 80  NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 139
           NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct: 80  NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139

Query: 140 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 199
           G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199

Query: 200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 259
           S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct: 200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259

Query: 260 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 319
           FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319

Query: 320 YLRMLKV 326
           YLRMLK 
Sbjct: 320 YLRMLKA 326

Initiates a process leading to the deglycation of proteins. Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 7EC: 2

>sp|A2XBT1|FN3KR_ORYSI Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_09747 PE=3 SV=1

 Score =  502 bits (1292), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/306 (76%), Positives = 265/306 (86%)

Query: 21  RISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTN 80
           R + S+    A L +DPIR+WIL+EGKAT IT +  +GGGCIN A  Y TDAGSFFVKTN
Sbjct: 37  RSAASRLSIMAALGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDAGSFFVKTN 96

Query: 81  RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFG 140
             IGPSMFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS  G
Sbjct: 97  GRIGPSMFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALG 156

Query: 141 KKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 200
           +KLAEMHKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L   ++GDS
Sbjct: 157 RKLAEMHKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDS 216

Query: 201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEF 260
            IY +G RL++N+ PLFEG  +EPCLLHGDLWSGNISSD +GEPVILDPACYYGHNEAEF
Sbjct: 217 AIYDKGQRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTDGEPVILDPACYYGHNEAEF 276

Query: 261 GMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 320
           GMSWCAGFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDY
Sbjct: 277 GMSWCAGFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDY 336

Query: 321 LRMLKV 326
           LRMLK 
Sbjct: 337 LRMLKA 342

Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 2

>sp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0117800 PE=2 SV=1

 Score =  502 bits (1292), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/306 (76%), Positives = 264/306 (86%)

Query: 21  RISFSKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTN 80
           R + S+    A L +DPIR+WIL+EGKAT IT +  +GGGCIN A  Y TDA SFFVKTN
Sbjct: 37  RSAASRLSIMAALGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDASSFFVKTN 96

Query: 81  RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFG 140
             IGPSMFEGEALGL AMY+T +IR P P+KVG+LPTGGS+IIMEFIEFG SRG+QS  G
Sbjct: 97  GRIGPSMFEGEALGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALG 156

Query: 141 KKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS 200
           +KLAEMHKA KS KG+GF VDNTIGSTPQIN WT++WIEFY++HRLG+QL+L   ++GDS
Sbjct: 157 RKLAEMHKAAKSDKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDS 216

Query: 201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEF 260
            IY +G RL++N+ PLFEG  +EPCLLHGDLWSGNISSD NGEPVILDPACYYGHNEAEF
Sbjct: 217 AIYDKGQRLIENMHPLFEGAVMEPCLLHGDLWSGNISSDTNGEPVILDPACYYGHNEAEF 276

Query: 261 GMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDY 320
           GMSWCAGFGG FY+SYFEVMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDY
Sbjct: 277 GMSWCAGFGGEFYSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDY 336

Query: 321 LRMLKV 326
           LRMLK 
Sbjct: 337 LRMLKA 342

Phosphorylates low-molecular-mass and protein-bound erythrulosamines and ribulosamines, but not fructosamines or psicosamines, on the third carbon of the sugar moiety. Protein-bound erythrulosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 2

>sp|Q8K274|KT3K_MOUSE Ketosamine-3-kinase OS=Mus musculus GN=Fn3krp PE=2 SV=2

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/285 (41%), Positives = 161/285 (56%), Gaps = 26/285 (9%)

Query: 58  GGGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116
           GGGCI+    Y TD G  FVK N ++    MFEGE   L A+ +T T++ P+P KV   P
Sbjct: 21  GGGCISQGQSYDTDKGRVFVKVNSKAEARRMFEGEMASLTAILKTGTVKVPKPIKVVDAP 80

Query: 117 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSSKG--------- 155
            GGS ++ME ++      + +  G +LA++H            +AG   KG         
Sbjct: 81  GGGSMLVMEHLDMRYLSSHATKLGTQLADLHLENKRLGERLLKEAGTVGKGGEQAERQYV 140

Query: 156 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 213
             FGFDV    G  PQ+N W  NW+EFYA  R+  Q+ +   + GD    +    L   +
Sbjct: 141 DQFGFDVVTCCGYLPQVNDWQKNWVEFYARQRIQPQMDMVEKKSGDREALELWSALQLKI 200

Query: 214 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 272
             LF  + + P LLHGDLW GN++ D +G P+I DPA +YGH+E E  ++    GF  SF
Sbjct: 201 PDLFRDLEIVPALLHGDLWGGNVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSF 259

Query: 273 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSII 317
           Y++Y   +PK PGFEKR  LY L+HYLNH+N FGSGYR S+L+I+
Sbjct: 260 YSAYHSKIPKTPGFEKRLQLYQLFHYLNHWNHFGSGYRGSSLNIM 304

Phosphorylates psicosamines and ribulosamines, but not fructosamines, on the third carbon of the sugar moiety. Protein-bound psicosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q9HA64|KT3K_HUMAN Ketosamine-3-kinase OS=Homo sapiens GN=FN3KRP PE=1 SV=2

 Score =  220 bits (560), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 163/290 (56%), Gaps = 26/290 (8%)

Query: 58  GGGCINLASRYGTDAGSFFVKTN-RSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116
           GGGCI+    Y TD G  FVK N ++    MFEGE   L A+ +T T++ P+P KV   P
Sbjct: 21  GGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLTAILKTNTVKVPKPIKVLDAP 80

Query: 117 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSSKG--------- 155
            GGS ++ME ++      + +  G +LA++H            +AG   +G         
Sbjct: 81  GGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEMRLKEAGTVGRGGGQEERPFV 140

Query: 156 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 213
             FGFDV    G  PQ+N W  +W+ FYA  R+  Q+ +   + GD    Q    L   +
Sbjct: 141 ARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMVEKESGDREALQLWSALQLKI 200

Query: 214 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 272
             LF  + + P LLHGDLW GN++ D +G PVI DPA +YGH+E E  ++    GF  SF
Sbjct: 201 PDLFRDLEIIPALLHGDLWGGNVAEDSSG-PVIFDPASFYGHSEYELAIAGMFGGFSSSF 259

Query: 273 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 322
           Y++Y   +PK PGFEKR  LY L+HYLNH+N FGSGYR S+L+I+ + ++
Sbjct: 260 YSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSSLNIMRNLVK 309

Phosphorylates psicosamines and ribulosamines, but not fructosamines, on the third carbon of the sugar moiety. Protein-bound psicosamine 3-phosphates and ribulosamine 3-phosphates are unstable and decompose under physiological conditions. Thus phosphorylation leads to deglycation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|P74594|Y1563_SYNY3 Uncharacterized protein slr1563 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1563 PE=3 SV=1

 Score =  218 bits (555), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/288 (43%), Positives = 174/288 (60%), Gaps = 19/288 (6%)

Query: 44  SEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRT 103
           + G+   I +   V GGCIN           +FVK N++    MF+ EALGL AM  T+T
Sbjct: 19  TTGQPFRIQERRSVSGGCINQGYCLVDGEQKYFVKLNQAQQWQMFQAEALGLEAMAATQT 78

Query: 104 IRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF---GKKLAEMHKAGKSSKGFGFDV 160
           IR PRP   G+   G SY+++E++EFG  RGN   +   G+ LA +H+AG S++ FG+  
Sbjct: 79  IRVPRPICHGS-SAGHSYLVLEWLEFG--RGNHDSWYRMGQNLAALHQAGGSAQ-FGWQT 134

Query: 161 DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD----STIYQRGHRLMKNLAPL 216
           DNTIG+TPQ N WT +W +F+AEHRLGYQL LA  + G+    + +  +  +L+ +  P 
Sbjct: 135 DNTIGATPQPNPWTDSWADFFAEHRLGYQLALARRRAGNFPDPAVVVPKVKQLLGDRQP- 193

Query: 217 FEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNS 275
                  P L+HGDLWSGN +    GEPVILDPA YYG  E +  M+    GF  +FY  
Sbjct: 194 ------TPALVHGDLWSGNGAILTTGEPVILDPATYYGDGEVDLAMTELFGGFPAAFYQG 247

Query: 276 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 323
           Y  + P +PG+++R+ LY LYH LNH+NLFG GY+  A  ++   LR+
Sbjct: 248 YHSISPAEPGYQQRKILYNLYHILNHFNLFGGGYQQQAQQMLKQCLRI 295

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9ER35|FN3K_MOUSE Fructosamine-3-kinase OS=Mus musculus GN=Fn3k PE=2 SV=1

 Score =  212 bits (540), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 157/290 (54%), Gaps = 26/290 (8%)

Query: 58  GGGCINLASRYGTDAGSFFVKTNR-SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116
           GGGCI+    Y TD+G  FVK NR +    MFEGE   L A+  T  +R P+P KV  LP
Sbjct: 21  GGGCISEGYAYYTDSGPVFVKVNRRTQARQMFEGEMASLEALRNTGLVRVPKPMKVIDLP 80

Query: 117 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH----------KAGKSSKG----------- 155
            GG+  +ME ++  S     S  G+++A++H          K  +++ G           
Sbjct: 81  GGGAVFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKSKTRQNTVGCGAEGAEPQGV 140

Query: 156 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 213
             FGF      G  PQ+N+W  +W  F+  HRL  QL L    Y D    +   RL   +
Sbjct: 141 TKFGFHTVTCCGFIPQVNEWQEDWPTFFTRHRLQAQLDLIEKDYADRETQELWSRLQVKI 200

Query: 214 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSF 272
             LF G+ + P LLHGDLWSGN++ D  G PVI DPA +YGH+E E  + S   GF  SF
Sbjct: 201 PDLFAGIEIVPALLHGDLWSGNVAEDDQG-PVIYDPASFYGHSEFELAIASMFGGFPRSF 259

Query: 273 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 322
           + +Y   +PK PGF+KR  LY L++YLNH+N FG  YRS +L ++   LR
Sbjct: 260 FTAYHRKIPKAPGFDKRLLLYQLFNYLNHWNHFGREYRSPSLGVMRKLLR 309

May initiate a process leading to the deglycation of fructoselysine and of glycated proteins. May play a role in the phosphorylation of 1-deoxy-1-morpholinofructose (DMF), fructoselysine, fructoseglycine, fructose and glycated lysozyme.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q9H479|FN3K_HUMAN Fructosamine-3-kinase OS=Homo sapiens GN=FN3K PE=1 SV=1

 Score =  208 bits (530), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/290 (39%), Positives = 155/290 (53%), Gaps = 26/290 (8%)

Query: 58  GGGCINLASRYGTDAGSFFVKTNR-SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116
           G GCI+    Y TDAG  FVK NR +    MFEGE   L A+  T  +R PRP KV  LP
Sbjct: 21  GAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLEALRSTGLVRVPRPMKVIDLP 80

Query: 117 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMH---------------KAGKSSKG------ 155
            GG+  +ME ++  S     S  G+++A++H                 G+  +G      
Sbjct: 81  GGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREKLKEEENTVGRRGEGAEPQYV 140

Query: 156 --FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL 213
             FGF      G  PQ+N+W  +W  F+A HRL  QL L    Y D    +   RL   +
Sbjct: 141 DKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLIEKDYADREARELWSRLQVKI 200

Query: 214 APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSF 272
             LF G+ + P LLHGDLWSGN++ D  G P+I DPA +YGH+E E  ++    GF  SF
Sbjct: 201 PDLFCGLEIVPALLHGDLWSGNVAEDDVG-PIIYDPASFYGHSEFELAIALMFGGFPRSF 259

Query: 273 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 322
           + +Y   +PK PGF++R  LY L++YLNH+N FG  YRS +L  +   L+
Sbjct: 260 FTAYHRKIPKAPGFDQRLLLYQLFNYLNHWNHFGREYRSPSLGTMRRLLK 309

May initiate a process leading to the deglycation of fructoselysine and of glycated proteins. May play a role in the phosphorylation of 1-deoxy-1-morpholinofructose (DMF), fructoselysine, fructoseglycine, fructose and glycated lysozyme.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q9KRU5|Y1539_VIBCH Uncharacterized protein VC_1539 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_1539 PE=3 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 19/288 (6%)

Query: 43  LSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE 100
           LSE  GK  H+ +   V GG IN           +FVKTN+    + F  E   L  M E
Sbjct: 9   LSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRE 68

Query: 101 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSV--FGKKLAEMHKAGKSSKGFGF 158
           + T++ P     G   T  +Y+++ ++        +    FG +LA +H+ G+  K FGF
Sbjct: 69  SNTVQVPEYILHGTSKTH-AYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQ-KEFGF 126

Query: 159 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMK----NLA 214
           D+DN IG+T Q N W   W  F+AE R+G+QL+L  ++  + T       ++K    N +
Sbjct: 127 DIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKTRLANHS 186

Query: 215 PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFY 273
           P        P LLHGDLW GN+++  NG P+  DPACY+G  E +  ++ W  GF   F+
Sbjct: 187 P-------RPSLLHGDLWFGNVANIVNG-PLCFDPACYWGDRECDIALAEWFGGFQPEFF 238

Query: 274 NSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 321
             Y  V P   G+E+R+D+Y LYH LNHYN FG  Y   A  +I+  L
Sbjct: 239 QGYESVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKIL 286

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

>sp|Q87PM1|Y1481_VIBPA Uncharacterized protein VP1481 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VP1481 PE=3 SV=1

 Score =  166 bits (419), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 143/281 (50%), Gaps = 27/281 (9%)

Query: 50  HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRP 109
            IT+   + GG I+ +         +FVK N       FE EA  L  + ET TI  P  
Sbjct: 18  QITEKVRLSGGDISESYMINDGEQRYFVKINDREFLHKFEVEAESLHLLRETSTIFVPEV 77

Query: 110 FKVGALPTGGSYIIMEFIEFG--SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST 167
             VG      ++II+ ++         N   FG++LA++H+ G+  K FGFD DN +GST
Sbjct: 78  VLVGK-TKNNAFIILNYLPTKPLDDPENSFKFGQQLAQLHQWGEQ-KEFGFDTDNYLGST 135

Query: 168 PQINKWTSNWIEFYAEHRLGYQLKLA---------LDQYGDSTIYQRGHRLMKNLAPLFE 218
            Q N+W   W  F+AE R+G+QL+L          +D + D        +L+ N  P   
Sbjct: 136 LQPNQWHKKWCMFFAEQRIGWQLQLLKEKGVTLVDIDDFIDVV-----KQLLANHTP--- 187

Query: 219 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYF 277
               EP LLHGDLW+GN++    G P+  DPACY+G  E +  M+    GF   FY  Y 
Sbjct: 188 ----EPSLLHGDLWNGNVALTAFG-PICFDPACYWGDRECDIAMTELFGGFQPEFYQGYE 242

Query: 278 EVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIID 318
            VMP  PG+ +R+D+Y LYH LNH NLFG  Y   A   I+
Sbjct: 243 SVMPLLPGYHERKDIYNLYHILNHCNLFGGHYLEQAQLTIN 283

Vibrio parahaemolyticus (taxid: 670)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
225453762	330	PREDICTED: protein-ribulosamine 3-kinase	0.996	0.984	0.821	1e-158
147781802	298	hypothetical protein VITISV_011421 [Viti	0.907	0.993	0.871	1e-154
255541454	402	kinase, putative [Ricinus communis] gi|2	0.904	0.733	0.861	1e-153
224067842	296	predicted protein [Populus trichocarpa]	0.907	1.0	0.858	1e-153
356505144	332	PREDICTED: uncharacterized protein At3g6	0.996	0.978	0.786	1e-153
449432201	332	PREDICTED: protein-ribulosamine 3-kinase	0.929	0.912	0.806	1e-148
297817418	326	fructosamine kinase family protein [Arab	0.914	0.914	0.825	1e-147
22331896	326	protein kinase-like protein [Arabidopsis	0.932	0.932	0.811	1e-147
357114344	343	PREDICTED: uncharacterized protein At3g6	0.944	0.897	0.751	1e-141
8388624	318	putative protein [Arabidopsis thaliana]	0.907	0.930	0.798	1e-140

>gi|225453762|ref|XP_002274443.1| PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Vitis vinifera] gi|296089080|emb|CBI38783.3| unnamed protein product [Vitis vinifera]

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/330 (82%), Positives = 292/330 (88%), Gaps = 5/330 (1%)

Query: 2   MATTHVGFLSFGSFLP-LP--SRISFSKRRTF--ATLSDDPIREWILSEGKATHITKICP 56
           M   HVG +S G   P LP    +SF K + F  A L +DPIREWILSEGKAT IT+I P
Sbjct: 1   MVAAHVGLVSSGCCFPSLPWFPSLSFPKTKPFVMAALGEDPIREWILSEGKATQITRISP 60

Query: 57  VGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP 116
           VGGGCINLASRY TDAGSFFVKTNRSIGPSMFEGEALGLGAMYET++IR PRPFKVG LP
Sbjct: 61  VGGGCINLASRYDTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETKSIRVPRPFKVGPLP 120

Query: 117 TGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN 176
           TGGSYIIMEFIEFG SRG+Q+V G+KLAEMHKAGKS KGFGFDVDNTIGSTPQIN WTS+
Sbjct: 121 TGGSYIIMEFIEFGRSRGDQAVLGRKLAEMHKAGKSEKGFGFDVDNTIGSTPQINTWTSD 180

Query: 177 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNI 236
           W++FYAEHRLGYQLKLALDQYGDSTIY +G +LMKNL  LFE V +EPCLLHGDLWSGNI
Sbjct: 181 WVKFYAEHRLGYQLKLALDQYGDSTIYAKGEKLMKNLGRLFENVEIEPCLLHGDLWSGNI 240

Query: 237 SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLY 296
           SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYN+YFEVMPKQ GFEKRRD+YMLY
Sbjct: 241 SSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNAYFEVMPKQAGFEKRRDVYMLY 300

Query: 297 HYLNHYNLFGSGYRSSALSIIDDYLRMLKV 326
           HYLNHYNLFGSGYRSSA+SIIDDYLR+  +
Sbjct: 301 HYLNHYNLFGSGYRSSAMSIIDDYLRIFNI 330

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147781802|emb|CAN65444.1| hypothetical protein VITISV_011421 [Vitis vinifera]

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 258/296 (87%), Positives = 275/296 (92%)

Query: 31  ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEG 90
           A L +DPIREWILSEGKAT ITKI PVGGGCINLASRY TDAGSFFVKTNRSIGPSMFEG
Sbjct: 3   AALGEDPIREWILSEGKATQITKISPVGGGCINLASRYDTDAGSFFVKTNRSIGPSMFEG 62

Query: 91  EALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 150
           EALGLGAMYET++IR PRPFKVG LPTGGSYIIMEFIEFG SRG+Q+V G+KLAEMHKAG
Sbjct: 63  EALGLGAMYETKSIRVPRPFKVGPLPTGGSYIIMEFIEFGRSRGDQAVLGRKLAEMHKAG 122

Query: 151 KSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 210
           KS KGFGFDVDNTIGSTPQIN WTS+W++FYAEHRLGYQLKLALDQYGDSTIY +G +LM
Sbjct: 123 KSEKGFGFDVDNTIGSTPQINTWTSDWVKFYAEHRLGYQLKLALDQYGDSTIYAKGEKLM 182

Query: 211 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG 270
           K L  LFE V +EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG
Sbjct: 183 KILGRLFENVEIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG 242

Query: 271 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 326
           SFYN+YFEVMPKQ GFEKRRD+YMLYHYLNHYNLFGSGYRSSA+SIIDDYLR+  +
Sbjct: 243 SFYNAYFEVMPKQAGFEKRRDVYMLYHYLNHYNLFGSGYRSSAMSIIDDYLRIFNI 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541454|ref|XP_002511791.1| kinase, putative [Ricinus communis] gi|223548971|gb|EEF50460.1| kinase, putative [Ricinus communis]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 254/295 (86%), Positives = 276/295 (93%)

Query: 32  TLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGE 91
            +S+DPIREWILSEG AT IT+I  +GGGCINLA+RY TDAG+FFVKTNRSIGPSMFEGE
Sbjct: 108 AMSEDPIREWILSEGNATKITRISSIGGGCINLANRYDTDAGTFFVKTNRSIGPSMFEGE 167

Query: 92  ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGK 151
           ALGLGAMYETRTIR PRPFKVG LPTGGSYIIMEFIEFG+SRGNQ + GKKLAEMHKAGK
Sbjct: 168 ALGLGAMYETRTIRVPRPFKVGPLPTGGSYIIMEFIEFGASRGNQPLLGKKLAEMHKAGK 227

Query: 152 SSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMK 211
           S KGFGFDVDNTIGSTPQIN WTS+WIEFY  HRLGYQLKLALD+YGDS+IYQ+G RL+K
Sbjct: 228 SQKGFGFDVDNTIGSTPQINTWTSDWIEFYGVHRLGYQLKLALDKYGDSSIYQKGQRLVK 287

Query: 212 NLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGS 271
           N+APLFEG+  EPCLLHGDLWSGNISSDKNG+PVILDPACYYGHNEAEFGMSWCAGFG +
Sbjct: 288 NMAPLFEGIVTEPCLLHGDLWSGNISSDKNGKPVILDPACYYGHNEAEFGMSWCAGFGEA 347

Query: 272 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 326
           FYN+YFEVMPKQPGF+KRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLR+LK 
Sbjct: 348 FYNAYFEVMPKQPGFDKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRILKA 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067842|ref|XP_002302560.1| predicted protein [Populus trichocarpa] gi|222844286|gb|EEE81833.1| predicted protein [Populus trichocarpa]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 254/296 (85%), Positives = 274/296 (92%)

Query: 31  ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEG 90
           A +SDDPI +WI+SEG AT IT+  P+GGGCIN A RY TDAGSFFVKTNR IGPSMFEG
Sbjct: 1   AAMSDDPISDWIMSEGNATQITRTSPIGGGCINNARRYDTDAGSFFVKTNRGIGPSMFEG 60

Query: 91  EALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG 150
           EALGLGAMYETRTIR PRPFKVG LPTGGSYIIMEFIEFG+SRGNQSV G+KLAEMHKAG
Sbjct: 61  EALGLGAMYETRTIRVPRPFKVGPLPTGGSYIIMEFIEFGASRGNQSVLGRKLAEMHKAG 120

Query: 151 KSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM 210
           KS KGFGFDVDNTIGSTPQIN WTS+WIEFY +HRLGYQLKLALDQYGDSTIYQ+G RL+
Sbjct: 121 KSEKGFGFDVDNTIGSTPQINTWTSDWIEFYGKHRLGYQLKLALDQYGDSTIYQKGKRLV 180

Query: 211 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG 270
           KN+APLF+ + +EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG
Sbjct: 181 KNMAPLFQNIVIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGG 240

Query: 271 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 326
           SFYN+YFEVMPKQPGFEKRR++Y+LYHYLNHYNLFGS YRSSA+SIIDDYL ML V
Sbjct: 241 SFYNAYFEVMPKQPGFEKRREIYLLYHYLNHYNLFGSSYRSSAMSIIDDYLLMLGV 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505144|ref|XP_003521352.1| PREDICTED: uncharacterized protein At3g61080, chloroplastic-like [Glycine max]

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/332 (78%), Positives = 291/332 (87%), Gaps = 7/332 (2%)

Query: 2   MATTHVGFLSFGSFLP-LPS--RISFSKRRTFA----TLSDDPIREWILSEGKATHITKI 54
           M + HVG +S  +  P LP   R SF+K ++      ++S DP+REWILS+GKAT ITKI
Sbjct: 1   MTSAHVGAMSSSTCFPSLPRLLRPSFTKTKSSPKFSMSMSKDPVREWILSDGKATEITKI 60

Query: 55  CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA 114
            PVGGGCINLASRY TDAGSFFVKTNRSIGPSMFE EALGLGAMYET TIR P+P+KVG 
Sbjct: 61  SPVGGGCINLASRYDTDAGSFFVKTNRSIGPSMFEAEALGLGAMYETGTIRVPKPYKVGP 120

Query: 115 LPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWT 174
           LPTGGS+IIMEFI+FG+SRG QS  G+KLAEMHKAGKSSKGFGFDVDNTIGSTPQ+N W+
Sbjct: 121 LPTGGSFIIMEFIQFGASRGYQSDLGRKLAEMHKAGKSSKGFGFDVDNTIGSTPQVNTWS 180

Query: 175 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSG 234
           S+W++FY EHRLGYQLKLALDQYGD TIY +G RL+K++APLF  V +EPCLLHGDLWSG
Sbjct: 181 SDWVQFYGEHRLGYQLKLALDQYGDRTIYDKGQRLVKSMAPLFANVVIEPCLLHGDLWSG 240

Query: 235 NISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYM 294
           NISSDKNGEPVILDPACYYGH+EAEFGMSWCAGFGGSFYNSYFEVMPK PGFE+RRDLYM
Sbjct: 241 NISSDKNGEPVILDPACYYGHSEAEFGMSWCAGFGGSFYNSYFEVMPKLPGFEERRDLYM 300

Query: 295 LYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 326
           LYHYLNHYNLFGSGYRSSA+SIIDDYL +LK 
Sbjct: 301 LYHYLNHYNLFGSGYRSSAMSIIDDYLAILKA 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432201|ref|XP_004133888.1| PREDICTED: protein-ribulosamine 3-kinase, chloroplastic-like [Cucumis sativus] gi|449480088|ref|XP_004155796.1| PREDICTED: protein-ribulosamine 3-kinase, chloroplastic-like [Cucumis sativus]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/305 (80%), Positives = 277/305 (90%), Gaps = 2/305 (0%)

Query: 24  FSKRR--TFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNR 81
           ++KR   + A L DDPI+EWILSEGKAT ITKI PVGGGCIN A+RY TDAGSFFVK NR
Sbjct: 28  YAKRHPVSVAALGDDPIKEWILSEGKATQITKISPVGGGCINQANRYDTDAGSFFVKRNR 87

Query: 82  SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGK 141
           SIGPSMFE EALGL AMYET+TIR P+PFK G LP+GGSYIIMEFIEFGSSRGNQS  G+
Sbjct: 88  SIGPSMFEAEALGLSAMYETQTIRVPKPFKFGPLPSGGSYIIMEFIEFGSSRGNQSELGR 147

Query: 142 KLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST 201
           KLAEMHK+GKS KGFGFDV+NTIGSTPQ+N W+S+W+ FYAE RLG+QL+LA+DQYGDST
Sbjct: 148 KLAEMHKSGKSDKGFGFDVNNTIGSTPQMNTWSSDWVRFYAEERLGFQLRLAVDQYGDST 207

Query: 202 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 261
           IY++G RL K++ PLF+ V +EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG
Sbjct: 208 IYEKGQRLAKSIGPLFDNVVIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG 267

Query: 262 MSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYL 321
           MSWCAGFGGSFY++YF+VMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYL
Sbjct: 268 MSWCAGFGGSFYDAYFKVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYL 327

Query: 322 RMLKV 326
           R+L+ 
Sbjct: 328 RILQA 332

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817418|ref|XP_002876592.1| fructosamine kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322430|gb|EFH52851.1| fructosamine kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/298 (82%), Positives = 270/298 (90%)

Query: 29  TFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMF 88
             A +S+DPIREWIL++GKAT ITKI  VGGGCINLAS Y TDAGSFFVKTNRSIGP+MF
Sbjct: 29  AMAAMSEDPIREWILTQGKATQITKIGSVGGGCINLASHYHTDAGSFFVKTNRSIGPAMF 88

Query: 89  EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHK 148
           EGEALGL AMYETRTIR P+P KVG  PTGGSYIIMEFI+FG SRGNQ+  G+KLAEMHK
Sbjct: 89  EGEALGLEAMYETRTIRVPKPHKVGEFPTGGSYIIMEFIDFGGSRGNQAELGRKLAEMHK 148

Query: 149 AGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR 208
           AGKSSKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGDS IYQ+GH 
Sbjct: 149 AGKSSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGDSAIYQKGHT 208

Query: 209 LMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGF 268
           L++N+A LFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+FGMSWCAGF
Sbjct: 209 LIQNMASLFENVVIEPCLLHGDLWSGNIAYDKNSEPVILDPACYYGHNEADFGMSWCAGF 268

Query: 269 GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLKV 326
           G SFYN+YF+VMPKQPG+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDDYLRMLKV
Sbjct: 269 GESFYNAYFKVMPKQPGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLKV 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331896|ref|NP_191667.2| protein kinase-like protein [Arabidopsis thaliana] gi|209572623|sp|Q9LEW8.2|FN3KR_ARATH RecName: Full=Protein-ribulosamine 3-kinase, chloroplastic; AltName: Full=Fructosamine 3-kinase-related protein; Short=AtFN3K-RP; Flags: Precursor gi|17979159|gb|AAL49775.1| unknown protein [Arabidopsis thaliana] gi|21436461|gb|AAM51431.1| unknown protein [Arabidopsis thaliana] gi|332646630|gb|AEE80151.1| protein kinase-like protein [Arabidopsis thaliana]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/307 (81%), Positives = 273/307 (88%), Gaps = 3/307 (0%)

Query: 23  SFSKRRTF---ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 79
           +FS R  F   A +S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20  NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query: 80  NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 139
           NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct: 80  NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139

Query: 140 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 199
           G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199

Query: 200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 259
           S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct: 200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259

Query: 260 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 319
           FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319

Query: 320 YLRMLKV 326
           YLRMLK 
Sbjct: 320 YLRMLKA 326

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357114344|ref|XP_003558960.1| PREDICTED: uncharacterized protein At3g61080, chloroplastic-like isoform 1 [Brachypodium distachyon]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 236/314 (75%), Positives = 272/314 (86%), Gaps = 6/314 (1%)

Query: 19  PSRISFSKRRTFATLS------DDPIREWILSEGKATHITKICPVGGGCINLASRYGTDA 72
           PSR S   RR  + LS      DDPI+EWIL+EGKAT IT I  +GGGCIN A RY TDA
Sbjct: 30  PSRRSACTRRAASKLSIVAAMGDDPIKEWILTEGKATQITGISSIGGGCINSAQRYITDA 89

Query: 73  GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS 132
           GSFFVKTNR IGP+MFEGEALGL AMY+T++IR P P+KVG+LPTGGS+IIMEFI+FG S
Sbjct: 90  GSFFVKTNRRIGPAMFEGEALGLKAMYDTKSIRVPLPYKVGSLPTGGSFIIMEFIQFGRS 149

Query: 133 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 192
           RG+QS  G+KLAEMHKA KS KG+GF V+NTIGSTPQIN WT++WIEFY++HRLGYQL+L
Sbjct: 150 RGDQSALGRKLAEMHKAAKSDKGYGFYVENTIGSTPQINTWTADWIEFYSKHRLGYQLEL 209

Query: 193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 252
              ++GDS IY++G +L+KN+ PLF+G  +EPCLLHGDLWSGNISSD NG+PVILDPACY
Sbjct: 210 ISQRFGDSAIYEKGQQLIKNMHPLFDGAVIEPCLLHGDLWSGNISSDANGDPVILDPACY 269

Query: 253 YGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSS 312
           YGHNEAEFGMSWCAGFGG FY+SYF+VMPKQPGFEKRRDLY+LYHYLNHYNLFGSGYRSS
Sbjct: 270 YGHNEAEFGMSWCAGFGGEFYSSYFQVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSS 329

Query: 313 ALSIIDDYLRMLKV 326
           A+SII+DYLRMLK 
Sbjct: 330 AMSIIEDYLRMLKA 343

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8388624|emb|CAB94144.1| putative protein [Arabidopsis thaliana]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/307 (79%), Positives = 269/307 (87%), Gaps = 11/307 (3%)

Query: 23  SFSKRRTF---ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 79
           +FS R  F   A +S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct: 20  NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query: 80  NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 139
           NRSIGP+MFEGEALGL AMYETRTIRA      G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct: 80  NRSIGPAMFEGEALGLEAMYETRTIRA------GELPTGGSYIIMEFIDFGGSRGNQAEL 133

Query: 140 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 199
           G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct: 134 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 193

Query: 200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 259
           S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPA  YGHNEA+
Sbjct: 194 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPA--YGHNEAD 251

Query: 260 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 319
           FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRDLY+LYHYLNHYNLFGSGYRSSA+SIIDD
Sbjct: 252 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 311

Query: 320 YLRMLKV 326
           YLRMLK 
Sbjct: 312 YLRMLKA 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
TAIR|locus:2101022	326	AT3G61080 [Arabidopsis thalian	0.929	0.929	0.774	5.2e-129
UNIPROTKB|F1RZZ3	309	FN3KRP "Uncharacterized protei	0.509	0.537	0.410	2.9e-50
UNIPROTKB|Q0P592	309	FN3KRP "Uncharacterized protei	0.493	0.521	0.411	1.8e-48
RGD|1304570	309	Fn3krp "fructosamine-3-kinase-	0.579	0.611	0.367	2.9e-48
MGI|MGI:1926834	309	Fn3k "fructosamine 3 kinase" [	0.509	0.537	0.404	7.7e-48
UNIPROTKB|F1S006	309	FN3K "Uncharacterized protein"	0.570	0.601	0.363	1.8e-46
UNIPROTKB|E1BRW9	309	FN3KRP "Uncharacterized protei	0.509	0.537	0.386	7.6e-46
UNIPROTKB|H9GWC7	302	FN3KRP "Uncharacterized protei	0.530	0.572	0.378	9.7e-46
UNIPROTKB|F1MK10	309	FN3K "Uncharacterized protein"	0.570	0.601	0.358	6.7e-45
UNIPROTKB|Q9KRU5	288	VC_1539 "Uncharacterized prote	0.837	0.947	0.330	1.7e-34

TAIR|locus:2101022 AT3G61080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
 Identities = 237/306 (77%), Positives = 260/306 (84%)

Query:    23 SFSKRRTF---ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKT 79
             +FS R  F   A +S+DPIREWIL+EGKAT ITKI  VGGGCINLAS Y TDAGSFFVKT
Sbjct:    20 NFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCINLASHYQTDAGSFFVKT 79

Query:    80 NRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVF 139
             NRSIGP+MFEGEALGL AMYETRTIR P P K G LPTGGSYIIMEFI+FG SRGNQ+  
Sbjct:    80 NRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYIIMEFIDFGGSRGNQAEL 139

Query:   140 GKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD 199
             G+KLAEMHKAGK+SKGFGF+VDNTIGSTPQIN W+S+WIEFY E RLGYQLKLA DQYGD
Sbjct:   140 GRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYGEKRLGYQLKLARDQYGD 199

Query:   200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAE 259
             S IYQ+GH L++N+APLFE V +EPCLLHGDLWSGNI+ DKN EPVILDPACYYGHNEA+
Sbjct:   200 SAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNNEPVILDPACYYGHNEAD 259

Query:   260 FGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDD 319
             FGMSWCAGFG SFYN+YF+VMPKQ G+EKRRD             FGSGYRSSA+SIIDD
Sbjct:   260 FGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDD 319

Query:   320 YLRMLK 325
             YLRMLK
Sbjct:   320 YLRMLK 325

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=RCA

UNIPROTKB|F1RZZ3 FN3KRP "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 353 (129.3 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
 Identities = 69/168 (41%), Positives = 97/168 (57%)

Query:   156 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 215
             FGFDV    G  PQ+N W S+W+ FYA  R+  Q++L     GD    +    L   +  
Sbjct:   143 FGFDVVTCCGYLPQVNDWQSDWVTFYARQRIQPQMELLEQGSGDREARELWAALQLKIPD 202

Query:   216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYN 274
             LF  +++ P LLHGDLW GN++ D +G PVI DPA +YGH+E E  ++    GF G+FY+
Sbjct:   203 LFRDLDIVPALLHGDLWGGNVAEDPSG-PVIFDPASFYGHSEYELAIAGMFGGFSGAFYS 261

Query:   275 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYLR 322
             +Y   +PK PGFE+R               FG+GYR S+LSI+ + +R
Sbjct:   262 AYHGRVPKAPGFERRHQLYQLFHYLNHWNHFGAGYRGSSLSIMRNLVR 309

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q0P592 FN3KRP "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 346 (126.9 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 67/163 (41%), Positives = 92/163 (56%)

Query:   156 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 215
             FGFDV    G  PQ+N W  +W+ FYA  R+  Q+ L   + GD    +    L   +  
Sbjct:   143 FGFDVVTCCGYLPQVNDWQQDWVTFYARQRIQPQMDLVEQRSGDREARELWAALQLKIPD 202

Query:   216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYN 274
             LF  +++ P LLHGDLW GN++ D +G P+I DPA +YGH+E E  ++    GF  +FY+
Sbjct:   203 LFHDLDIIPALLHGDLWGGNVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSAFYS 261

Query:   275 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSII 317
             +Y   +PK PGFEKR               FGSGYR S+LSI+
Sbjct:   262 AYHSKIPKAPGFEKRLKLYQLFHYLNHWNHFGSGYRGSSLSIM 304

GO:0016301 "kinase activity" evidence=IEA

RGD|1304570 Fn3krp "fructosamine-3-kinase-related protein" [Rattus norvegicus (taxid:10116)]

 Score = 339 (124.4 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
 Identities = 75/204 (36%), Positives = 104/204 (50%)

Query:   128 EFGSSRGNQSVFGKKLAE--MHKAGKSSKG-----------FGFDVDNTIGSTPQINKWT 174
             + GS   +  +  KKL E  + +AG   KG           FGFDV    G  PQ+N W 
Sbjct:   102 KLGSQLADLHLENKKLGERLLKEAGTVGKGGGLAERQYVDQFGFDVVTCCGYLPQVNDWQ 161

Query:   175 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSG 234
              +W+ FYA  R+  Q+ +   + GD         L   +  LF  + + P LLHGDLW G
Sbjct:   162 KDWVTFYARQRIQPQMDMVEKKSGDREALGLWSALQLKIPDLFRDLEIVPSLLHGDLWGG 221

Query:   235 NISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXX 293
             N++ D +G P+I DPA +YGH+E E  ++    GF  SFY++Y   +P  PGFEKR    
Sbjct:   222 NVAEDSSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSFYSAYHSKIPTTPGFEKRLQLY 280

Query:   294 XXXXXXXXXXXFGSGYRSSALSII 317
                        FGSGYR S+L+I+
Sbjct:   281 QLFHYLNHWNHFGSGYRGSSLNIM 304

GO:0016301 "kinase activity" evidence=IEA

MGI|MGI:1926834 Fn3k "fructosamine 3 kinase" [Mus musculus (taxid:10090)]

 Score = 331 (121.6 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
 Identities = 68/168 (40%), Positives = 88/168 (52%)

Query:   156 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 215
             FGF      G  PQ+N+W  +W  F+  HRL  QL L    Y D    +   RL   +  
Sbjct:   143 FGFHTVTCCGFIPQVNEWQEDWPTFFTRHRLQAQLDLIEKDYADRETQELWSRLQVKIPD 202

Query:   216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGM-SWCAGFGGSFYN 274
             LF G+ + P LLHGDLWSGN++ D  G PVI DPA +YGH+E E  + S   GF  SF+ 
Sbjct:   203 LFAGIEIVPALLHGDLWSGNVAEDDQG-PVIYDPASFYGHSEFELAIASMFGGFPRSFFT 261

Query:   275 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYLR 322
             +Y   +PK PGF+KR               FG  YRS +L ++   LR
Sbjct:   262 AYHRKIPKAPGFDKRLLLYQLFNYLNHWNHFGREYRSPSLGVMRKLLR 309

GO:0005829 "cytosol" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030387 "fructosamine-3-kinase activity" evidence=IDA

GO:0030389 "fructosamine metabolic process" evidence=IDA

UNIPROTKB|F1S006 FN3K "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 312 (114.9 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
 Identities = 72/198 (36%), Positives = 101/198 (51%)

Query:   135 NQSVFGKKL-AEMHKAGKSSKG--------FGFDVDNTIGSTPQINKWTSNWIEFYAEHR 185
             NQ + G+KL  E  + G+ ++G        FGF      G  PQ+N+W  +W  F+A HR
Sbjct:   114 NQKL-GEKLRGEESRVGQRAEGAGPQYVTKFGFHTVTCCGFIPQVNEWQDDWPTFFARHR 172

Query:   186 LGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 245
             L  QL L    Y D    +   RL   +  LF G+ + P LLHGDLWSGN++ D  G PV
Sbjct:   173 LQAQLDLIEKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDLG-PV 231

Query:   246 ILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXX 304
             + DPA +YGH+E E  ++    GF   F+ +Y   +PK PGF++R               
Sbjct:   232 VYDPASFYGHSEFELAIALMFGGFPRPFFTAYHRKVPKAPGFDRRLLLYQLFNYLNHWNH 291

Query:   305 FGSGYRSSALSIIDDYLR 322
             FG  YRS +L  +   L+
Sbjct:   292 FGRQYRSPSLGTMRKLLK 309

GO:0030389 "fructosamine metabolic process" evidence=IEA

GO:0030387 "fructosamine-3-kinase activity" evidence=IEA

UNIPROTKB|E1BRW9 FN3KRP "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 332 (121.9 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
 Identities = 65/168 (38%), Positives = 93/168 (55%)

Query:   156 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 215
             FGF      G  PQ+N W ++W+ F+A  R+  Q+ +     GD    +   RL   +  
Sbjct:   143 FGFHTVTCCGYLPQVNDWQADWVTFFARQRIQPQMDMIEKNSGDREARELWARLQLKIPS 202

Query:   216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC-AGFGGSFYN 274
             LF  V + P LLHGDLW GN++ D +G P+I DPA +YGH+E E  ++    GF  SFY+
Sbjct:   203 LFCDVEIVPALLHGDLWGGNVAEDDSG-PIIFDPASFYGHSEYELAIAGMFGGFSSSFYS 261

Query:   275 SYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYLR 322
             +Y   +PK PGFEKR               FGSGYR S+L+I+ + ++
Sbjct:   262 AYHSKIPKAPGFEKRLKLYQLFHYMNHWNHFGSGYRGSSLNIMRNLVK 309

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|H9GWC7 FN3KRP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 315 (115.9 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 67/177 (37%), Positives = 91/177 (51%)

Query:   133 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 192
             R   S  GK   ++ +A      FGFDV    G  PQ+N W  +W+ FYA  R+  Q+ +
Sbjct:   122 RKEASTVGKGGGQVDRAFVDK--FGFDVVTCCGYLPQVNDWQDDWVTFYARQRIQPQMDM 179

Query:   193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 252
                  GD    +    L   +  LF  +++ P LLHGDLW+GN++ D +G PVI DPA +
Sbjct:   180 VEKGSGDREARELWSALQLKIPDLFRDLDIVPALLHGDLWAGNVAEDSSG-PVIFDPASF 238

Query:   253 YGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSG 308
             YGH E E  ++    GFG SFY++Y   +PK PGFE R               FGSG
Sbjct:   239 YGHAEYELAIAGMFGGFGRSFYSAYHGAIPKAPGFEARLQLYQLFHYLNHWNHFGSG 295

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|F1MK10 FN3K "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 317 (116.6 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 71/198 (35%), Positives = 104/198 (52%)

Query:   135 NQSVFGKKLAEM-HKAGKSSKG--------FGFDVDNTIGSTPQINKWTSNWIEFYAEHR 185
             NQ + G+KL E  ++ G+ ++G        FGF      G  PQ+N+W  +W  F+  HR
Sbjct:   114 NQKL-GEKLREEENRVGQRAEGAGPRYVAKFGFHTVTCCGFIPQVNEWQDDWPTFFTRHR 172

Query:   186 LGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPV 245
             L  QL L    Y D    +   +L   +  LF G+ + P LLHGDLWSGN++ D +G P+
Sbjct:   173 LQAQLDLIEKDYADREAQELWSQLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDSG-PI 231

Query:   246 ILDPACYYGHNEAEFGMSWC-AGFGGSFYNSYFEVMPKQPGFEKRRDXXXXXXXXXXXXX 304
             I DPA +YGH+E E  ++    GF  SF+ +Y + +PK PGF++R               
Sbjct:   232 IYDPASFYGHSEFELAIALMFGGFPRSFFTAYHQKVPKAPGFDRRLLLYQLFNYLNHWNH 291

Query:   305 FGSGYRSSALSIIDDYLR 322
             FG  YRS +L  +   L+
Sbjct:   292 FGRQYRSPSLGTMRKLLK 309

GO:0030389 "fructosamine metabolic process" evidence=IEA

GO:0030387 "fructosamine-3-kinase activity" evidence=IEA

UNIPROTKB|Q9KRU5 VC_1539 "Uncharacterized protein VC_1539" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 94/284 (33%), Positives = 139/284 (48%)

Query:    43 LSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE 100
             LSE  GK  H+ +   V GG IN           +FVKTN+    + F  E   L  M E
Sbjct:     9 LSEQLGKDFHLVEKEKVHGGDINECFMVSDGIDRYFVKTNQREYLTKFTAEVENLRVMRE 68

Query:   101 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-SRGNQSV-FGKKLAEMHKAGKSSKGFGF 158
             + T++ P     G   T  +Y+++ ++         +S  FG +LA +H+ G+  K FGF
Sbjct:    69 SNTVQVPEYILHGTSKTH-AYLVLNYLATKPLDDAERSYEFGVQLANLHRWGEQ-KEFGF 126

Query:   159 DVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFE 218
             D+DN IG+T Q N W   W  F+AE R+G+QL+L  ++  + T       ++K       
Sbjct:   127 DIDNYIGATVQPNPWHKKWALFFAEQRIGWQLQLMQEKGVNLTNINEFVEMVKTR---LA 183

Query:   219 GVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYF 277
               +  P LLHGDLW GN+++  NG P+  DPACY+G  E +  ++ W  GF   F+  Y 
Sbjct:   184 NHSPRPSLLHGDLWFGNVANIVNG-PLCFDPACYWGDRECDIALAEWFGGFQPEFFQGYE 242

Query:   278 EVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSALSIIDDYL 321
              V P   G+E+R+D             FG  Y   A  +I+  L
Sbjct:   243 SVWPLDWGYEERKDIYNLYHVLNHYNQFGGHYLDEAQKLIEKIL 286

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2XBT1	FN3KR_ORYSI	2, ., 7, ., 1, ., 1, 7, 2	0.7614	0.9386	0.8947	N/A	no
Q9KRU5	Y1539_VIBCH	No assigned EC number	0.3611	0.8251	0.9340	yes	no
Q10SM2	FN3KR_ORYSJ	2, ., 7, ., 1, ., 1, 7, 2	0.7614	0.9386	0.8947	yes	no
Q9HA64	KT3K_HUMAN	2, ., 7, ., 1, ., -	0.4	0.8098	0.8543	yes	no
Q9LEW8	FN3KR_ARATH	2, ., 7, ., 1, ., 1, 7, 2	0.8110	0.9325	0.9325	yes	no
Q8D9N5	Y2562_VIBVU	No assigned EC number	0.3248	0.8128	0.9201	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	326
pfam03881	287	pfam03881, Fructosamin_kin, Fructosamine kinase	1e-131
COG3001	286	COG3001, COG3001, Uncharacterized protein conserve	2e-81
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	1e-08
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	1e-04
COG3173	321	COG3173, COG3173, Predicted aminoglycoside phospho	0.002

>gnl|CDD|146488 pfam03881, Fructosamin_kin, Fructosamine kinase

 Score =  373 bits (961), Expect = e-131
 Identities = 125/288 (43%), Positives = 167/288 (57%), Gaps = 7/288 (2%)

Query: 38  IREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGA 97
            ++     G    IT+  PVGGG IN A R       +FVK N     +MFE EA GL  
Sbjct: 5   AQQLSEQLGTPFTITEREPVGGGDINQAYRISDGEQRYFVKLNEKEALAMFEAEAEGLEL 64

Query: 98  MYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKGF 156
           +  T+TIR PR    G+     S++++E++  G  + G+    G++LA++H+ G   K F
Sbjct: 65  LARTQTIRVPRVIAWGST-RDHSFLVLEYLPLGPDNTGSAYQLGQQLAKLHQWG-EQKQF 122

Query: 157 GFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPL 216
           GFD DNTIGSTPQ N+W S+W  F+AE R+G+QL+LA ++      +    RL++ +A L
Sbjct: 123 GFDFDNTIGSTPQPNRWQSSWATFFAEQRIGWQLQLAKEKGLS---FGDIDRLVERVADL 179

Query: 217 FEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFYNS 275
             G   +P LLHGDLWSGN +   +GEPVI DPACYYG  E +  M+    GF   FY+ 
Sbjct: 180 LAGHQPQPSLLHGDLWSGNAAFTADGEPVIFDPACYYGDRECDLAMTELFGGFPPDFYDG 239

Query: 276 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 323
           Y  V P   G+E R+ LY LYH LNH NLFG GY S A  +ID  L  
Sbjct: 240 YQSVYPLDEGYEDRKPLYQLYHLLNHLNLFGGGYLSQAQQLIDKLLAE 287

This family includes eukaryotic fructosamine-3-kinase enzymes. The family also includes bacterial members that have not been characterized but probably have a similar or identical function. Length = 287

>gnl|CDD|225547 COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]

 Score =  248 bits (635), Expect = 2e-81
 Identities = 109/281 (38%), Positives = 145/281 (51%), Gaps = 20/281 (7%)

Query: 50  HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRP 109
            I +   V GG IN A R       FFVK N+    SMF  EA GL  +  + TI  P+ 
Sbjct: 17  EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKV 76

Query: 110 FKVGALPTGGSYIIMEFIEFGSSRG-NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP 168
             VGA     SY+++E++  G     +  + G++LA +H+ G     FG D DN IG+TP
Sbjct: 77  IAVGA-SRDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWG-GQAQFGLDFDNYIGTTP 134

Query: 169 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH------RLMKNLAPLFEGVNV 222
           Q N W   W  F+AE R+G+QL+LA          +RG        +++ +  L      
Sbjct: 135 QPNTWQRRWATFFAEQRIGWQLQLAR---------ERGLTFGDIDAIVEKIQELLADHQP 185

Query: 223 EPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGSFYNSYFEVMP 281
           +P LLHGDLWSGN +  K+G PVI DPACY+G  E +  M     GF   FY+ Y  V P
Sbjct: 186 QPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPEFYDGYQSVSP 244

Query: 282 KQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR 322
              G+ +R+ +Y LYH LNH NLFG  Y   A   ID  L 
Sbjct: 245 LPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS 285

Length = 286

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 44/261 (16%), Positives = 73/261 (27%), Gaps = 44/261 (16%)

Query: 53  KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPS---MFEGEALGLGAMYETRTIRAPRP 109
            + P+ GG  N     GT  G + +K       +     E   L   A      I  PR 
Sbjct: 1   TLRPLSGGASNRTYLVGTGDGRYVLKLAPPAEAAEELRRELALLRHLA---AAGIPVPRV 57

Query: 110 FKVGALPTGGS--YIIMEFIEFGSSRGNQSV----------FGKKLAEMHKAGKSSKGFG 157
              G    G    +++ME +  G                    + LA +H     +    
Sbjct: 58  LAGGTDGGGLGLPFLLMEGLP-GEVLTRPLDPAERGALLEALARLLARLHSVPPEALPLA 116

Query: 158 FDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPL 216
                               ++   +      +L  A      + +++R    +  L P 
Sbjct: 117 R--------------RLRRRLKLLRQLAAALRRLVAAELLDRLAELWERLLAALLALLPA 162

Query: 217 FEGVNVEPCLLHGDLWSGNISSDKNGEPV-ILDPA-CYYGHNEAEFGM---SWCAGFGGS 271
                    L+HGDL  GN+  D  G    ++D      G    +      S     G  
Sbjct: 163 LP-----LVLVHGDLHPGNLLVDPGGRVTGVIDFEDAGLGDPAYDLASLLRSLGEELGAE 217

Query: 272 FYNSYFEVMPKQPGFEKRRDL 292
              +Y       P   + R+L
Sbjct: 218 LLAAYLAAYGAAPDPARLREL 238

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 54  ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKV 112
           I  + GG  N     GT    + +K N S    +  E E   L  +   + +  P+    
Sbjct: 3   IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAIL-QLLARKGLPVPKVLAS 61

Query: 113 GALPTGGSYIIMEFIEFGSSRGNQSVF---------GKKLAEMHKA 149
           G    G SY++ME+IE G +    S            + LA++H+ 
Sbjct: 62  GESD-GWSYLLMEWIE-GETLDEVSEEEKEDIAEQLAELLAKLHQL 105

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|225714 COG3173, COG3173, Predicted aminoglycoside phosphotransferase [General function prediction only]

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 44/234 (18%), Positives = 72/234 (30%), Gaps = 47/234 (20%)

Query: 38  IREWILSEGKATHITKICPVG-GGCINLASRYGTDAGSFFVKTNRSIGPS-MFEGEALGL 95
           +  ++ S+        I     GG  N   R G     + ++      P      E    
Sbjct: 13  LAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKR-- 70

Query: 96  GAMYETRTIRA------PRPFKVGALPTGGS----YIIMEFIE---------FGSSRGNQ 136
               E R I A      P P +   L   G     + +ME++E           S     
Sbjct: 71  ----EYRVIAALLDVDVPVP-RAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQF 125

Query: 137 SV--FGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL 194
           ++      LAE+H    +        +   G   Q+ +W   +             K  L
Sbjct: 126 ALDALADFLAELHSIDAAGLPDPGKPNAYRGR--QLARWDDEYRRA----------KKEL 173

Query: 195 DQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD 248
              G   +  R  + ++   P + G    P L+HGD   GN+  D      +LD
Sbjct: 174 G--GRIPLADRLIKWLEANRPPWAG---PPVLVHGDYRPGNLIIDPGRPTGVLD 222

Length = 321

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	100.0
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	100.0
KOG3021	313	consensus Predicted kinase [General function predi	100.0
PRK10593	297	hypothetical protein; Provisional	100.0
PRK05231	319	homoserine kinase; Provisional	100.0
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	99.97
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	99.96
COG2334	331	Putative homoserine kinase type II (protein kinase	99.95
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	99.92
PRK11768	325	serine/threonine protein kinase; Provisional	99.92
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	99.9
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	99.89
PLN02876	822	acyl-CoA dehydrogenase	99.89
PRK09550	401	mtnK methylthioribose kinase; Reviewed	99.89
PLN02756	418	S-methyl-5-thioribose kinase	99.89
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	99.88
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	99.88
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	99.88
PF01636	239	APH: Phosphotransferase enzyme family This family	99.88
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	99.87
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.86
PRK06148	1013	hypothetical protein; Provisional	99.86
PRK06149	972	hypothetical protein; Provisional	99.85
PRK12396	409	5-methylribose kinase; Reviewed	99.85
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	99.85
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	99.84
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	99.83
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.83
PLN02236	344	choline kinase	99.78
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	99.75
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	99.75
PTZ00296	442	choline kinase; Provisional	99.71
PRK10271	188	thiK thiamine kinase; Provisional	99.62
COG3231	266	Aph Aminoglycoside phosphotransferase [Translation	99.61
PTZ00384	383	choline kinase; Provisional	99.6
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	99.58
TIGR02905	313	spore_yutH spore coat protein YutH. Members of thi	99.57
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.56
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	99.47
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	99.45
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	99.37
COG4857	408	Predicted kinase [General function prediction only	99.32
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.27
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	99.25
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.25
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	99.19
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.19
PRK14879	211	serine/threonine protein kinase; Provisional	99.16
KOG4720	391	consensus Ethanolamine kinase [Lipid transport and	99.13
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.1
KOG3087	229	consensus Serine/threonine protein kinase [General	98.98
TIGR02457	528	TreS_Cterm trehalose synthase-fused probable malto	98.95
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	98.93
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.91
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.9
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.89
PRK09902	216	hypothetical protein; Provisional	98.87
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.76
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.68
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.66
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.65
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.65
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.64
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.61
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.61
smart00090	237	RIO RIO-like kinase.	98.59
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.58
KOG2686	366	consensus Choline kinase [Cell wall/membrane/envel	98.57
PRK12274	218	serine/threonine protein kinase; Provisional	98.57
PRK14705	1224	glycogen branching enzyme; Provisional	98.47
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.43
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.39
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.27
COG2187	337	Uncharacterized protein conserved in bacteria [Fun	98.27
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.22
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.2
KOG2268	465	consensus Serine/threonine protein kinase [Signal	98.19
KOG0605	550	consensus NDR and related serine/threonine kinases	98.17
PRK09188	365	serine/threonine protein kinase; Provisional	98.12
COG3570	274	StrB Streptomycin 6-kinase [Defense mechanisms]	98.05
KOG0610	459	consensus Putative serine/threonine protein kinase	98.01
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	97.97
KOG1187	361	consensus Serine/threonine protein kinase [Signal	97.93
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	97.93
PLN00034	353	mitogen-activated protein kinase kinase; Provision	97.92
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	97.92
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	97.92
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	97.91
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	97.89
KOG1989	738	consensus ARK protein kinase family [Signal transd	97.88
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	97.85
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	97.83
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	97.82
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	97.82
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	97.81
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.81
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.8
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	97.8
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	97.79
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	97.79
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	97.79
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	97.78
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	97.77
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	97.77
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	97.77
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	97.75
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	97.74
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	97.74
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.73
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	97.73
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	97.72
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	97.72
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	97.71
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	97.71
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	97.7
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	97.7
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	97.7
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	97.69
PTZ00263	329	protein kinase A catalytic subunit; Provisional	97.69
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	97.69
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	97.69
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	97.69
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	97.68
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	97.67
KOG0598	357	consensus Ribosomal protein S6 kinase and related	97.66
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	97.66
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	97.66
KOG2270	520	consensus Serine/threonine protein kinase involved	97.66
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	97.65
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	97.65
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	97.65
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	97.64
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.64
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	97.64
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	97.64
PTZ00267	478	NIMA-related protein kinase; Provisional	97.63
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	97.63
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	97.63
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	97.62
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	97.62
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.62
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	97.62
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	97.61
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	97.61
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	97.6
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	97.6
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	97.59
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	97.58
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.58
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	97.57
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	97.57
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	97.56
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	97.56
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	97.55
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	97.55
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	97.55
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	97.55
KOG0595	429	consensus Serine/threonine-protein kinase involved	97.54
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	97.53
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	97.52
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	97.52
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	97.51
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	97.51
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	97.51
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	97.5
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	97.5
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	97.5
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	97.5
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	97.49
KOG0192	362	consensus Tyrosine kinase specific for activated (	97.48
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	97.48
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	97.47
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	97.47
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	97.47
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	97.45
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	97.45
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.45
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	97.43
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	97.43
PRK10345	210	hypothetical protein; Provisional	97.43
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	97.42
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	97.42
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	97.41
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	97.41
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	97.41
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	97.41
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	97.4
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	97.39
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	97.38
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	97.38
KOG3653	534	consensus Transforming growth factor beta/activin	97.38
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	97.37
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	97.37
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	97.36
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	97.36
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	97.36
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	97.35
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.35
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	97.35
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	97.35
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	97.34
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	97.34
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	97.34
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	97.33
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	97.33
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	97.33
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	97.33
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	97.32
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	97.32
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	97.32
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	97.32
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	97.32
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	97.32
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.32
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	97.31
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	97.31
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	97.3
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	97.3
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	97.29
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	97.29
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	97.29
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	97.28
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	97.28
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	97.28
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	97.28
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	97.27
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	97.27
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	97.26
KOG0581	364	consensus Mitogen-activated protein kinase kinase	97.26
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	97.26
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	97.26
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	97.25
PHA03209	357	serine/threonine kinase US3; Provisional	97.24
PHA03211	461	serine/threonine kinase US3; Provisional	97.24
KOG0583	370	consensus Serine/threonine protein kinase [Signal	97.24
TIGR02569	272	TIGR02569_actnb conserved hypothetical protein TIG	97.24
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	97.23
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	97.23
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	97.22
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.22
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	97.22
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	97.22
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	97.22
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	97.21
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.2
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	97.2
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	97.2
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	97.2
PHA03212	391	serine/threonine kinase US3; Provisional	97.2
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	97.2
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	97.19
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	97.19
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	97.19
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.19
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	97.19
PTZ00266	1021	NIMA-related protein kinase; Provisional	97.18
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	97.17
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	97.17
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	97.17
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	97.17
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	97.16
PHA03207	392	serine/threonine kinase US3; Provisional	97.16
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	97.16
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	97.16
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	97.14
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	97.14
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.13
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	97.13
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	97.13
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	97.12
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.12
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	97.12
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	97.11
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	97.11
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	97.11
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	97.1
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	97.1
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	97.1
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	97.09
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	97.09
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	97.08
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.08
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	97.08
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	97.08
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	97.07
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	97.07
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	97.07
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.06
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	97.06
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	97.06
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	97.06
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	97.06
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	97.06
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	97.05
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	97.05
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	97.05
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	97.04
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	97.04
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	97.04
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	97.03
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	97.03
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	97.03
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	97.02
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	97.02
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	97.02
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	97.01
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.01
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	97.01
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	96.99
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	96.99
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	96.99
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	96.98
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	96.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	96.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	96.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	96.96
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	96.96
KOG0198	313	consensus MEKK and related serine/threonine protei	96.95
KOG0578	550	consensus p21-activated serine/threonine protein k	96.94
PTZ00024	335	cyclin-dependent protein kinase; Provisional	96.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	96.92
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	96.91
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	96.9
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	96.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	96.9
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	96.9
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	96.89
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	96.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	96.85
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	96.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	96.85
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	96.85
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	96.84
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	96.84
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	96.84
PTZ00284	467	protein kinase; Provisional	96.83
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	96.82
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	96.82
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	96.81
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	96.8
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	96.8
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	96.79
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	96.78
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	96.78
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	96.78
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	96.75
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	96.75
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	96.75
KOG0575	592	consensus Polo-like serine/threonine protein kinas	96.75
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	96.74
PHA02988	283	hypothetical protein; Provisional	96.74
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	96.73
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	96.72
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	96.71
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	96.71
PLN00009	294	cyclin-dependent kinase A; Provisional	96.71
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	96.7
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	96.69
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	96.67
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	96.67
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	96.66
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.65
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	96.63
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	96.62
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	96.62
PTZ00036	440	glycogen synthase kinase; Provisional	96.62
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	96.57
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	96.56
KOG0607	463	consensus MAP kinase-interacting kinase and relate	96.56
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	96.56
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	96.56
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	96.55
PTZ00283	496	serine/threonine protein kinase; Provisional	96.54
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	96.54
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	96.52
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	96.52
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	96.48
KOG2052	513	consensus Activin A type IB receptor, serine/threo	96.47
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	96.47
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	96.45
KOG0577	948	consensus Serine/threonine protein kinase [Signal	96.45
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	96.45
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	96.37
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	96.37
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	96.37
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	96.36
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	96.35
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	96.33
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	96.33
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	96.3
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	96.3
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	96.3
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.3
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	96.29
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	96.28
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	96.24
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	96.2
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	96.19
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	96.15
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	96.11
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	96.11
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	96.09
PHA03210	501	serine/threonine kinase US3; Provisional	96.08
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.05
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	96.05
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.04
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	96.02
PLN03224	507	probable serine/threonine protein kinase; Provisio	96.02
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	96.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	95.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	95.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	95.92
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	95.91
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	95.9
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	95.87
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	95.87
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	95.8
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	95.67
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	95.46
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	95.35
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	95.32
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	95.32
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	95.24
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	95.22
KOG0694	694	consensus Serine/threonine protein kinase [Signal	95.21
KOG1167	418	consensus Serine/threonine protein kinase of the C	95.2
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	95.13
COG3281	438	Ble Uncharacterized protein, probably involved in	95.11
KOG0582	516	consensus Ste20-like serine/threonine protein kina	94.92
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	94.83
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	94.31
KOG0584	632	consensus Serine/threonine protein kinase [General	94.29
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	94.24
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	94.16
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	94.08
PF10009	385	DUF2252: Uncharacterized protein conserved in bact	94.0
KOG2269	531	consensus Serine/threonine protein kinase [Signal	93.98
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	93.69
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	93.57
KOG0586	596	consensus Serine/threonine protein kinase [General	92.92
PHA02882	294	putative serine/threonine kinase; Provisional	92.87
cd05124	238	AFK Actin-Fragmin Kinase (AFK); catalytic domain.	92.58
PF09192	275	Act-Frag_cataly: Actin-fragmin kinase, catalytic;	92.47
KOG1152	772	consensus Signal transduction serine/threonine kin	92.31
PF13575	370	DUF4135: Domain of unknown function (DUF4135)	91.98
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	91.22
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	91.16
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	90.95
KOG0589	426	consensus Serine/threonine protein kinase [General	90.46
KOG1290	590	consensus Serine/threonine protein kinase [Signal	90.13
KOG4721	904	consensus Serine/threonine protein kinase, contain	89.8
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	89.45
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	89.25
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	89.24
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	87.69
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	87.42
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	87.24
PLN00181	793	protein SPA1-RELATED; Provisional	86.4
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	85.67
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	85.02
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	84.56
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	84.33
PHA00451	362	protein kinase	84.33
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	83.92
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	83.86
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	83.59
COG4320	410	Uncharacterized protein conserved in bacteria [Fun	82.99
KOG0611	668	consensus Predicted serine/threonine protein kinas	82.71
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	82.61
KOG1236	565	consensus Predicted unusual protein kinase [Genera	82.38
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	82.36
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	81.34

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=100.00  E-value=3e-51  Score=367.00  Aligned_cols=283  Identities=46%  Similarity=0.798  Sum_probs=210.5

Q ss_pred             chhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeec
Q 020393           35 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG  113 (326)
Q Consensus        35 ~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~  113 (326)
                      |++|.+.|.+. +.+.+++++++++||..|.+|++++++++||+|+++.....+++.|++.|+.|++..++.||+|+..+
T Consensus         2 w~~i~~~~~~~~~~~~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G   81 (288)
T PF03881_consen    2 WQAIEQQISEQLGADFKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWG   81 (288)
T ss_dssp             HHHHHHHHHHHHTS-----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEE
T ss_pred             hHHHHHHHHHHhCCCCceeeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            57788888887 56667999999999999999999988889999999865578899999999999877789999999998


Q ss_pred             ccCCCceEEEEeeecCCC-CCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHH
Q 020393          114 ALPTGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL  192 (326)
Q Consensus       114 ~~~~~~~~~v~e~l~G~~-~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~  192 (326)
                      .. .+..|+||||++... ....++++|+.||+||+... .+.|||+.++++|.+||.|.|.++|.+||.++|+.++++.
T Consensus        82 ~~-~~~~fLlle~l~~~~~~~~~~~~lg~~LA~LH~~~~-~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~  159 (288)
T PF03881_consen   82 EY-DDDAFLLLEFLEMGSPSPPDWEELGRQLAALHQWSP-AGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLEL  159 (288)
T ss_dssp             E--SSCCEEEEE--------CCHHHHHHHHHHHHHH-T---SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHH
T ss_pred             ee-cCCceEEEEeecCCCCCchhHHHHHHHHHHHhhhcC-CCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            76 456799999999873 35889999999999999332 2469999999999999999999999999998899999988


Q ss_pred             HHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh-hhcCCChH
Q 020393          193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS  271 (326)
Q Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~-~~~~~~~~  271 (326)
                      +.+.+...   ..++++.+.+...+.....+|+|||||||+||++++.+|.++|||+.|++||+++|||++ ++++++++
T Consensus       160 ~~~~~~~~---~~~~~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa~yygh~E~DLam~~lfggf~~~  236 (288)
T PF03881_consen  160 AREKGGLD---AELERLVERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPACYYGHREVDLAMTRLFGGFPDE  236 (288)
T ss_dssp             HHHCTSS----CHHHHHHHHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S---EEE-CHHHHHHHCCCSTTHHH
T ss_pred             HHhhCCch---hHHHHHHHHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccccccCchHhhhhhhhhhCCCCHH
Confidence            87765432   234445555555555445689999999999999999998899999999999999999987 46889999


Q ss_pred             hHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020393          272 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR  322 (326)
Q Consensus       272 fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  322 (326)
                      |+++|.+..|++++|++|..+|+|++.++|..+||++|+.++.++|++|++
T Consensus       237 f~~~Y~~~~Pl~~g~~~R~~lY~Ly~lL~H~~lFG~~Y~~~~~~~l~~ll~  287 (288)
T PF03881_consen  237 FYDAYQEHYPLSEGWEDRNPLYQLYHLLNHLNLFGGSYRSQVRRILKRLLS  287 (288)
T ss_dssp             HHHHHHHHS---TTHHHHHHHHHHHHHHHHHHHC-GCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999986

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=100.00  E-value=6.1e-49  Score=329.56  Aligned_cols=281  Identities=39%  Similarity=0.681  Sum_probs=251.8

Q ss_pred             chhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeec
Q 020393           35 DDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG  113 (326)
Q Consensus        35 ~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~  113 (326)
                      |.+|...|.+. |.+ ++.+.++++||..|..|+|.++..+||+|.+......++.+|+.-|+.|++...+.||+|+..+
T Consensus         2 w~~i~~qlse~~g~~-~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G   80 (286)
T COG3001           2 WQAISQQLSEQLGEG-EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVG   80 (286)
T ss_pred             hHHHHHHHHHHhCch-hhhcccccCCccccceeEeecCCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEec
Confidence            56777777776 666 8999999999999999999988889999999876567889999999999987679999999998


Q ss_pred             ccCCCceEEEEeeecCCCCC-CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHH
Q 020393          114 ALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL  192 (326)
Q Consensus       114 ~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~  192 (326)
                      .+ .+..|+||+||+-.+.. ..+.++|+.||+||++... +.||+.-+|.+|..++.|.|.++|..||.++|+..+++.
T Consensus        81 ~~-~~~sylVle~L~~~~~d~~~~~~~GqqLA~LH~~~~~-~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlql  158 (286)
T COG3001          81 AS-RDHSYLVLEYLPTGPLDAHSAFILGQQLARLHQWGGQ-AQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQL  158 (286)
T ss_pred             CC-CCeeEEEEeeccCCCCCchhHHHHHHHHHHHHhhcCc-cccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHH
Confidence            76 67899999999977664 6789999999999999975 479999999999999999999999999999999999999


Q ss_pred             HHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh-hhcCCChH
Q 020393          193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFGGS  271 (326)
Q Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~-~~~~~~~~  271 (326)
                      +++++.+..   -++.+++.+.+++.++++.|+|+|||||.+|..+..+| ++|+|+.|.+||++.|||++ .+++++.+
T Consensus       159 ar~rg~~f~---did~~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~e  234 (286)
T COG3001         159 ARERGLTFG---DIDAIVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPE  234 (286)
T ss_pred             HHHhCCCcc---CHHHHHHHHHHHHhcCCCCcceeecccccccccccCCC-CeeeccccccCCcccceehhhhhcCCcHH
Confidence            988865432   23556666666777777889999999999999999998 99999999999999999998 56889999


Q ss_pred             hHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020393          272 FYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR  322 (326)
Q Consensus       272 fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  322 (326)
                      |+++|.++.|++.+|++|..+|.|+..++|...||+.|.+.++.++++.|+
T Consensus       235 fy~gY~sv~PL~~G~~eRk~iYqLY~llnh~~~FGg~Y~~~a~k~i~~iL~  285 (286)
T COG3001         235 FYDGYQSVSPLPAGYLERKPIYQLYHLLNHANLFGGHYLVEAQKSIDRILS  285 (286)
T ss_pred             HHHhhhccCCCCCchHHHhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999875

>KOG3021 consensus Predicted kinase [General function prediction only]

Probab=100.00  E-value=4.4e-47  Score=314.63  Aligned_cols=286  Identities=49%  Similarity=0.880  Sum_probs=254.4

Q ss_pred             HHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           39 REWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        39 ~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      +++|... +.. .|+.+-.+++|+++..--..|+.|+++||.++...+++++.|.+.|+++.+-..+.||+|+...+.+.
T Consensus         2 ee~l~ael~~~-~vr~~gs~gggcI~~~r~ydtDaG~~FvK~nr~~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~   80 (313)
T KOG3021|consen    2 EELLRAELGLN-NVRALGSVGGGCISDGRHYDTDAGKVFVKVNRSIARDMFEGELASLEAIQSTETVLVPRPIKVIDLPG   80 (313)
T ss_pred             hHHHHHhcCcc-eeeeecCCCCceeccccccccCCccEEEEeccccchHHHhhHHHHHHHHHhcCceecCCceeeEecCC
Confidence            3455544 333 56677777889988877777899999999999877899999999999998876799999999988778


Q ss_pred             CceEEEEeeecCCCCCCcHHHHHHHHHHHh------------hcCCCC-----------CCCCCCCCCcccccccCCCCC
Q 020393          118 GGSYIIMEFIEFGSSRGNQSVFGKKLAEMH------------KAGKSS-----------KGFGFDVDNTIGSTPQINKWT  174 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~~~~~~~lg~~La~lH------------~~~~~~-----------~~fg~~~~~~~~~~~~~~~~~  174 (326)
                      |..++|||+++-..+++++..+|..||.||            ....-.           ..|||...+++|.+||.|+|.
T Consensus        81 Ggs~lime~idf~~lr~~~a~lG~qlAdmHl~n~kl~e~r~~~~~tv~rgge~~e~~~v~~FGF~v~tccG~lpQvNdW~  160 (313)
T KOG3021|consen   81 GGSSLIMEHIDFQGLRSDAAKLGSQLADMHLKNEKLAEARRTEAGTVGRGGEEGEQIGVENFGFHVVTCCGRLPQVNDWQ  160 (313)
T ss_pred             CceeeeeehhhcccchhHHHHHHHHHHHHhhhhHHHHHHHHHhccccccCcccccccchhccceeeeeecccCcccccch
Confidence            899999999998888999999999999999            222110           239999999999999999999


Q ss_pred             ccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccC
Q 020393          175 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYG  254 (326)
Q Consensus       175 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G  254 (326)
                      ++|.+||...|+.++++.+.+.+.|.+..+++..+..+++.++.....-|+|+|||||.|||--|+.+.++|+|+.+++|
T Consensus       161 edW~eFf~rhRlq~Qldl~~~~~~Dre~~el~~~L~~kia~Lf~~~eI~PaLlHGDLW~GNva~D~~~ePiIfDPasfYg  240 (313)
T KOG3021|consen  161 EDWEEFFARHRLQPQLDLLEKTYGDREAFELWSILQTKIADLFKCLEILPALLHGDLWSGNVAEDGAGEPIIFDPASFYG  240 (313)
T ss_pred             hhHHHHHHHHhhhHHHHHHHHhhccHHHHHHHHHHHHhhHHHhccceeehhhhccccccCcccccCCCCceEeCchhhcC
Confidence            99999999889999999988888888889999999999999998766789999999999998888778899999999999


Q ss_pred             chhhhhhhhh-hcCCChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhc
Q 020393          255 HNEAEFGMSW-CAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRMLK  325 (326)
Q Consensus       255 ~~~~Dla~~~-~~~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (326)
                      |+++|+++.+ +++|++.|+++|.+..|..+++++|+.+|+|+++++||+.||++|+....+|++.|++.++
T Consensus       241 h~Efefgia~mfGgf~~sF~naY~k~ipka~G~eqR~~LYqLyhyLNHwNhFGs~YRs~sl~i~~n~lk~~~  312 (313)
T KOG3021|consen  241 HSEFEFGIAKMFGGFTQSFYNAYHKKIPKAPGFEQRLLLYQLYHYLNHWNHFGSGYRSSSLDIMRNLLKNCY  312 (313)
T ss_pred             CcHHHHHHHHHhCCCcHHHHHHHhhhcCCCCcHHHHHHHHHHHHHhhhhhhhccccccchhHHHHHHHHHhc
Confidence            9999999885 5889999999999999999999999999999999999999999999999999999999876

>PRK10593 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-38  Score=287.84  Aligned_cols=276  Identities=18%  Similarity=0.191  Sum_probs=216.1

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecc
Q 020393           36 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGA  114 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~  114 (326)
                      +.|++-+.+. .+.++.+++++++|.++.+|++++.++++|+|..+.. ....+..|++.|++|++.+.+|||+|+..+.
T Consensus         2 ~~~~~~~~~~-~~~~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~   80 (297)
T PRK10593          2 EQLRAELSHL-LGEKLSRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMT   80 (297)
T ss_pred             hHHHHHHHHH-hchhhheeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEec
Confidence            3456555555 4558999999999999999999988889999998653 4568999999999999876799999998654


Q ss_pred             cC--CCceEEEEeeecCCCCC----------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHH
Q 020393          115 LP--TGGSYIIMEFIEFGSSR----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA  182 (326)
Q Consensus       115 ~~--~~~~~~v~e~l~G~~~~----------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~  182 (326)
                      ..  .+..++|||+++|.+..          ....++++.|++||+...    +|+     .|.  ..+.|.++|..|+.
T Consensus        81 ~~~~~g~~~LVmE~i~G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~----~g~-----~g~--~~~~~~~~w~~f~~  149 (297)
T PRK10593         81 HEQSPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS----RGC-----VGA--VDSTQENLWPSWYQ  149 (297)
T ss_pred             cCCcCCCeEEEEeccCCEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh----hhc-----ccC--CCCcccccHHHHHH
Confidence            32  46799999999997642          123556799999999753    443     222  23456778888885


Q ss_pred             HhhhHHHH---HHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CC-eEEEccc-cccCch
Q 020393          183 EHRLGYQL---KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GE-PVILDPA-CYYGHN  256 (326)
Q Consensus       183 ~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~-~~iID~~-~~~G~~  256 (326)
                       +++....   +.+..........+.+.++.+.+++.+...+.+++|||||||+|||+++++ +. ++|||+. +.+||+
T Consensus       150 -~rl~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~r  228 (297)
T PRK10593        150 -QRVEVLWTTLNQFNNTGLTMQDRRILFRTRECLPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPR  228 (297)
T ss_pred             -HHHHHHHhhhhhccccCCChhHHHHHHHHHHhchhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCH
Confidence             5665433   222222222233445555666677766654457899999999999999865 33 7999997 899999


Q ss_pred             hhhhhhhhhcCCChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHh
Q 020393          257 EAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRML  324 (326)
Q Consensus       257 ~~Dla~~~~~~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  324 (326)
                      ++||+++.++++.++|+++|++..|++++|+.|..+|.||+.++|.++||+=+......+++.++.||
T Consensus       229 E~DLa~~~~~~f~~~f~~~Y~~~~pl~~g~~~R~~ly~Ly~~l~h~~~fG~~~~~~~~~~~~~~~~~~  296 (297)
T PRK10593        229 EYELFRLMDNGLAEQLLWRYLQKAPVAESFIWRRWLYVLWDEVAQLVNTGRFDRRRFDLAAKSLLPWL  296 (297)
T ss_pred             HHhHHHhhcCCccHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHhCccchhhHHHHHHHhcccc
Confidence            99999876678999999999999999999999999999999999999999999999999999998886

>PRK05231 homoserine kinase; Provisional

Probab=100.00  E-value=4.1e-31  Score=242.81  Aligned_cols=246  Identities=17%  Similarity=0.211  Sum_probs=172.1

Q ss_pred             cccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCC
Q 020393           27 RRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRA  106 (326)
Q Consensus        27 ~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~v  106 (326)
                      |+|||+++.++++++|..++.+ ++.+++++.+|..|.+|+|++++|+||||+++......+..|.+++++|++. ++||
T Consensus         1 m~vyt~ls~~~l~~~l~~y~~~-~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~~~l~~~~~~l~~L~~~-glpv   78 (319)
T PRK05231          1 MAVYTDVSDDELAAFLAPYDLG-ELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTAEDLPFFLGLMQHLAAR-GVPV   78 (319)
T ss_pred             CCccccCCHHHHHHHHHhcCCc-hhhccchhccccccceEEEEeCCCcEEEEEeccCChHHhHHHHHHHHHHHHC-CCCC
Confidence            8999999999999999777665 7999999999999999999999999999998632344556788999999886 6999


Q ss_pred             cceeeecccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccH
Q 020393          107 PRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNW  177 (326)
Q Consensus       107 P~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w  177 (326)
                      |+|+......     .+..+++++|++|....    ..++++|+.||+||....+   |..+..+..+       + ..|
T Consensus        79 P~~i~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---f~~~~~~~~~-------~-~~~  147 (319)
T PRK05231         79 PAPVARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRD---FPLERPNLRG-------L-AWW  147 (319)
T ss_pred             CcceeCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhc---CCccCCCCCC-------h-HHH
Confidence            9999764332     46789999999998653    4578999999999998763   4322211110       0 112


Q ss_pred             HHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcc-cccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCc
Q 020393          178 IEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP-LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH  255 (326)
Q Consensus       178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~  255 (326)
                      .+.+.  ++.+.+....    ...+.+.++.+.+.+.. ...  ..+.++||||+|++|||+++++..+|||| +|+.|+
T Consensus       148 ~~~~~--~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~--~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~  219 (319)
T PRK05231        148 RELAP--RLLPFLADEQ----AALLEAELAAQLAFLASAAWP--ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDK  219 (319)
T ss_pred             HHHHH--HHhhccChhH----HHHHHHHHHHHHHhhhccccc--cCCcccCCCCCCCCcEEEECCceEEEEecccccCCc
Confidence            22111  1111110000    01112223333333221 111  25779999999999999987766799998 689999


Q ss_pred             hhhhhhhh---hhc----CCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393          256 NEAEFGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       256 ~~~Dla~~---~~~----~~~----~~fl~~Y~~~~~l~~~~~~r~~~y  293 (326)
                      +++|||.+   ++.    .+.    .+|++||++.+|+++...+.+..+
T Consensus       220 ~~~DlA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~E~~~l~~~  268 (319)
T PRK05231        220 LLYDVAITLNDWCFEADGSLDATKARALLAAYQSVRPLTAAERAALPVM  268 (319)
T ss_pred             hHHHHHHHHHHHHccCCCCcCHHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence            99999965   331    132    579999999999987554444443

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=99.97  E-value=3.7e-29  Score=228.68  Aligned_cols=246  Identities=15%  Similarity=0.202  Sum_probs=175.9

Q ss_pred             cccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCC
Q 020393           27 RRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIR  105 (326)
Q Consensus        27 ~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~  105 (326)
                      |+|||.++.++|.++|.+++++ .+.+++++.+|..|.+|++++++++||+|++... ....+..|.+++++|++. ++|
T Consensus         1 ~~~~~~~~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~-g~p   78 (307)
T TIGR00938         1 MAVYTSVSDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAAR-GLP   78 (307)
T ss_pred             CCccccCCHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHC-CCC
Confidence            8999999999999999988765 6899999999999999999999999999998652 234567889999999886 689


Q ss_pred             CcceeeecccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCcc
Q 020393          106 APRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN  176 (326)
Q Consensus       106 vP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~  176 (326)
                      ||+++......     .+..+++++|++|....    ..++++|+.||+||.....   |..+...        ..+...
T Consensus        79 vp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~---~~~~~~~--------~~~~~~  147 (307)
T TIGR00938        79 VPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAH---FPENRKN--------SLRLEA  147 (307)
T ss_pred             CCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhcc---CCCCCCC--------CCChHH
Confidence            99999865432     46789999999998753    4578999999999998753   4322110        012234


Q ss_pred             HHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCc
Q 020393          177 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH  255 (326)
Q Consensus       177 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~  255 (326)
                      |...+... . ..+.     .......+.+++.++.+...... ..+.++||||+|++|+++++++..+|||| ++.+|+
T Consensus       148 w~~~~~~~-~-~~~~-----~l~~~~~~~l~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~  219 (307)
T TIGR00938       148 WHILAEKC-F-EAAP-----QLEAHMGAELDKELDYLDKFWPR-DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA  219 (307)
T ss_pred             HHHHHHhh-h-hccc-----ccCHHHHHHHHHHHHHHHhhhhh-cCCCccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence            54433211 0 0000     01111122233333333222221 35789999999999999998876799998 689999


Q ss_pred             hhhhhhhh---hh----cCCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393          256 NEAEFGMS---WC----AGFG----GSFYNSYFEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       256 ~~~Dla~~---~~----~~~~----~~fl~~Y~~~~~l~~~~~~r~~~y  293 (326)
                      +++|||.+   ++    ..+.    .+|++||++..|+++.+.+.+...
T Consensus       220 ~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~~~~Ls~~e~~~l~~~  268 (307)
T TIGR00938       220 RAYDLAITVNAWCFDADDHFDADHAKALIKGYHQSRPLTEEEKAAFPVL  268 (307)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            99999965   22    1233    689999999999997665555544

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=99.96  E-value=4.5e-27  Score=213.74  Aligned_cols=236  Identities=15%  Similarity=0.180  Sum_probs=167.2

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc
Q 020393           36 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL  115 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~  115 (326)
                      +++..++.+++++ ++.+++++.+|..|.+|++.+++++||+|+++......+..|.+++++|.+. ++|||+++.....
T Consensus         2 ~~l~~~l~~y~~~-~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~-g~~vp~~i~~~~g   79 (296)
T cd05153           2 EELASFLADYDLG-ELLSFEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAER-GLPVPRPIADRDG   79 (296)
T ss_pred             HHHHHHHHHcCCC-chhheecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHC-CCCCCccccCCCC
Confidence            6788999998766 7899999999999999999999899999998754445577899999999886 6899999986543


Q ss_pred             C-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhh
Q 020393          116 P-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRL  186 (326)
Q Consensus       116 ~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l  186 (326)
                      .     ++..++|++|++|.++.    ....++|+.||+||.....   |....+.         .....|...... +.
T Consensus        80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~---~~~~~~~---------~~~~~~~~~~~~-~~  146 (296)
T cd05153          80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS---FPGERNN---------LRGLAWIRELGK-DL  146 (296)
T ss_pred             cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc---CCccCCC---------cCCcHHHHHHHH-Hh
Confidence            1     46789999999998763    3578999999999998753   3211110         011233322111 01


Q ss_pred             HHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh--
Q 020393          187 GYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS--  263 (326)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~--  263 (326)
                      .+        .........+++.++.+...... ..+.++||||+|++|||+++++.++|||| .+.+|++++||+.+  
T Consensus       147 ~~--------~l~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~~~Dla~~~~  217 (296)
T cd05153         147 LP--------LLSAEDRALLADELARQDAFDPS-DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACTDAFLYDLAITLN  217 (296)
T ss_pred             cc--------ccCHHHHHHHHHHHHHHHhhhhh-cCCCcCCccCcCcccEEEeCCceEEEeehhhhcCchHHHHHHHHHH
Confidence            00        01122233444444443332111 35679999999999999998776799997 68999999999965  


Q ss_pred             -hhc----CCC----hHhHHHhhhhCCCCcCHHHHHHHHHH
Q 020393          264 -WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLYML  295 (326)
Q Consensus       264 -~~~----~~~----~~fl~~Y~~~~~l~~~~~~r~~~y~l  295 (326)
                       ++.    ++.    ++|+++|++..|++++....+..+.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~l~gY~~~~~ls~~e~~~l~~~~~  258 (296)
T cd05153         218 DWCFDEDGALDPERAQALLAGYQAVRPLTEAERAALPIMLR  258 (296)
T ss_pred             HHHhCccCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence             221    122    57999999999998765555555543

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=99.95  E-value=4.9e-27  Score=213.82  Aligned_cols=246  Identities=19%  Similarity=0.190  Sum_probs=175.1

Q ss_pred             cccccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCC
Q 020393           25 SKRRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRT  103 (326)
Q Consensus        25 ~~~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~  103 (326)
                      ..|++|+++..+++...|.+.++| ...++.++.. ..|.+|++++++|+||||++++. +...+..|.+++++|++. +
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~~~g-~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~~~~~~i~~el~~l~~La~~-~   79 (331)
T COG2334           3 DSMAVFTPLTSDEAAAALEAYHYG-LDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPGWTRAEIPFELALLQHLAER-G   79 (331)
T ss_pred             cccccccCcChHHHHHHHHhcCcC-cccccccccc-ccCceEEEEecCCCeEEEEecCCCCHHHHHHHHHHHHHHHHc-C
Confidence            358999999999999999998777 4567777865 89999999999999999999874 567788999999999987 6


Q ss_pred             CCCcceeeecccC-----CC--ceEEEEeeecCCCCC-----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCC
Q 020393          104 IRAPRPFKVGALP-----TG--GSYIIMEFIEFGSSR-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQIN  171 (326)
Q Consensus       104 ~~vP~~~~~~~~~-----~~--~~~~v~e~l~G~~~~-----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~  171 (326)
                      ++||.|+...+..     .+  ..+.+++|++|..+.     .+++.+|+.||+||.....   |.+..++..+    ..
T Consensus        80 i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~---f~~~~p~~~~----~~  152 (331)
T COG2334          80 IPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRG---FPFERPNALR----RL  152 (331)
T ss_pred             CCCCCCccCCCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCc---CCccCCCccc----cc
Confidence            8888886554332     46  899999999998764     4679999999999999974   5443443321    11


Q ss_pred             CCCccHHHHHHHhhhHHHHHHHHhhcCCh----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-CeEE
Q 020393          172 KWTSNWIEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVI  246 (326)
Q Consensus       172 ~~~~~w~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-~~~i  246 (326)
                      .|    .-  ...+.....    ....+.    .....++++.+.++..++.  ....+||||+|++||++++++ .+++
T Consensus       153 ~w----~~--~~~~~~~~~----~~~~~~~l~a~~~~~~~~~~~~~~~~lp~--~~~~iIH~D~~~~NVl~d~~~~~~g~  220 (331)
T COG2334         153 EW----DI--LEPRALLRL----DLVEPEDLRAALLAALDRLLARLPAHLPA--LGDQIIHGDLHPDNVLFDDDTDVSGF  220 (331)
T ss_pred             ch----hh--hcchhhhhh----cccCchhhHHHHHHHHHHHHhhchhhCCc--ccceeeecCCCccceeEcCCCCeeeE
Confidence            22    20  000000000    000111    1233444444444444332  123499999999999999887 4899


Q ss_pred             Ecc-ccccCchhhhhhhhh---hcC--C----ChHhHHHhhhhCCCCcCHHHHHHH
Q 020393          247 LDP-ACYYGHNEAEFGMSW---CAG--F----GGSFYNSYFEVMPKQPGFEKRRDL  292 (326)
Q Consensus       247 ID~-~~~~G~~~~Dla~~~---~~~--~----~~~fl~~Y~~~~~l~~~~~~r~~~  292 (326)
                      ||| +|++|+.++||+++.   ...  .    -.+|++||++.+|+++...+-+..
T Consensus       221 iDFdDa~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~El~~Lp~  276 (331)
T COG2334         221 IDFDDAGYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAAELELLPD  276 (331)
T ss_pred             EEccccccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            998 699999999999863   211  1    158999999999998755444443

>TIGR02721 ycfN_thiK thiamine kinase

Probab=99.92  E-value=2.1e-23  Score=185.84  Aligned_cols=230  Identities=16%  Similarity=0.121  Sum_probs=148.7

Q ss_pred             eEeCCccccceEEEEeCCccEEEEecCCCCcc---hHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393           55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPS---MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  131 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~---~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~  131 (326)
                      .++.+|.+|.+|++++++++||+|+++.....   ..+.|.++++.+++. ++ +|+++..+.     .++||+|++|.+
T Consensus         2 ~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~-g~-~P~~i~~~~-----~~~v~e~i~G~~   74 (256)
T TIGR02721         2 QTLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSAL-GL-APKPILVNE-----HWLLVEWLEGEV   74 (256)
T ss_pred             CcCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc-CC-CCceEEEeC-----CEEEEEeccCcc
Confidence            56789999999999988779999998753221   357899999999876 44 899998763     479999999987


Q ss_pred             CC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 020393          132 SR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  204 (326)
Q Consensus       132 ~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  204 (326)
                      +.       ....++++.|++||+.+..    +.+.               +..     .++..++.........+.   
T Consensus        75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~----~~~~---------------~~~-----~~~~~~~~~l~~~~~~~~---  127 (256)
T TIGR02721        75 ITLDQFVALDLLLELAALLHQLHSQPRF----GYPL---------------SLK-----ARIAHYWLQIDPARRTPE---  127 (256)
T ss_pred             cccccccCchhHHHHHHHHHHHhCCCCC----CCCC---------------CHH-----HHHHHHHHhcccccCChH---
Confidence            53       3478999999999998752    1110               000     011111111111111222   


Q ss_pred             HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhhc-C--CChHhHHHhhhhC
Q 020393          205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWCA-G--FGGSFYNSYFEVM  280 (326)
Q Consensus       205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~~-~--~~~~fl~~Y~~~~  280 (326)
                       +.++.+.+.........++++||||++++|||+++++ .+|||| .+.+|||.+|||.++.. +  ..+.|+++|.+..
T Consensus       128 -~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~~DLa~~~~~~~~~~~~~~l~~Y~~~~  205 (256)
T TIGR02721       128 -WLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIALELAAIIRANDEEQQQDFVQRYCQRR  205 (256)
T ss_pred             -HHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCCC-CEEEeccccCcCCHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence             2222222221111113578999999999999998876 789997 69999999999976432 1  2357999999886


Q ss_pred             CCC--cCHHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHHHHHHH
Q 020393          281 PKQ--PGFEKRRDLYMLYHYLNHYNLF--------GSGYRSSALSIIDDY  320 (326)
Q Consensus       281 ~l~--~~~~~r~~~y~l~~~l~~~~~~--------~~~~~~~~~~~~~~~  320 (326)
                      +..  +.+..++..|..+..+....++        ...|...+..+.+++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~a~~~~~~~  255 (256)
T TIGR02721       206 RIYSISVLWRQVKAWQPWVDYMAALWFELRWQQTGDPQFLELAQELRHRL  255 (256)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence            542  3555566555433333232222        245776666655543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=9.1e-24  Score=194.26  Aligned_cols=247  Identities=17%  Similarity=0.145  Sum_probs=162.7

Q ss_pred             ccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCC
Q 020393           30 FATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA  106 (326)
Q Consensus        30 ~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~v  106 (326)
                      |..++.+.|.+.+...|+. ....+..++ |..|.||+|+++++ +||+|++++.  +...+..|.+++.+|++. ++||
T Consensus         8 ~~~l~p~~~~~a~~~~g~~-~~~~~~~l~-s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~-gipv   84 (325)
T PRK11768          8 FQTLTPDLILDALESLGLR-VDGRLLALN-SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEA-EIPV   84 (325)
T ss_pred             CCCCChHHHHHHHHHcCCC-CccceEeec-cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC-CCCC
Confidence            5568899999999888552 224456664 68899999999766 7999998753  345677899999999986 6888


Q ss_pred             cceeeecc-cC---CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHH
Q 020393          107 PRPFKVGA-LP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI  178 (326)
Q Consensus       107 P~~~~~~~-~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~  178 (326)
                      |.|+..+. +.   ++..+.+++|++|....    .+.+++|+.||+||..+..   +++...         ..|  ++.
T Consensus        85 ~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~~~~~~~~~~~lG~~LarlH~~~~~---~~~~~r---------~~~--~~~  150 (325)
T PRK11768         85 VAPLAFNGQTLHEHQGFRFALFPRRGGRAPELDNLDQLEWVGRFLGRIHQVGAK---RPFEHR---------PTL--DLQ  150 (325)
T ss_pred             CCCccCCCCEEEEECCEEEEEEeeeCCCCCCCCCHHHHHHHHHHHHHHHhhccC---CCCCCC---------CcC--CHH
Confidence            88853221 10   47789999999998753    4579999999999998863   222110         011  111


Q ss_pred             HHHHHhhhHHHHHHHHhhcCChH----HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-cccc
Q 020393          179 EFYAEHRLGYQLKLALDQYGDST----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY  253 (326)
Q Consensus       179 ~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~  253 (326)
                      .+. .. ....+..  ....++.    ..+.++++.+.+.+.+...+.+.++||||+|++|||++ + ..+|||| +|+.
T Consensus       151 ~~~-~~-~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~  224 (325)
T PRK11768        151 EYG-IE-PRDWLLA--SDLIPSDLRPAYLAAADQLLAAVEACWARGDVRLLRLHGDCHPGNILWR-D-GPHFVDLDDARM  224 (325)
T ss_pred             HHH-HH-HHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence            111 00 0000100  0111111    22344444443333332213577899999999999995 4 4899998 6899


Q ss_pred             CchhhhhhhhhhcC------CChHhHHHhhhhCCCCcCHHHHHHHHHHHHHH
Q 020393          254 GHNEAEFGMSWCAG------FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYL  299 (326)
Q Consensus       254 G~~~~Dla~~~~~~------~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l  299 (326)
                      |++++||+++....      .-.+|++||++.+++++.+...+..+..++.+
T Consensus       225 g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~~r~l~~~e~~~l~~l~~lR~~  276 (325)
T PRK11768        225 GPAVQDLWMLLSGDRAEQLMQLETLLEGYEEFCEFDPRELALIEPLRALRLI  276 (325)
T ss_pred             CCHHHHHHHHhccCcchhHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            99999999764321      12479999999999997766666655444433

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=99.90  E-value=6.2e-23  Score=180.48  Aligned_cols=215  Identities=16%  Similarity=0.127  Sum_probs=135.9

Q ss_pred             EeEeC-CccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC--CceEEEEeeecC
Q 020393           54 ICPVG-GGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--GGSYIIMEFIEF  129 (326)
Q Consensus        54 v~~l~-~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~--~~~~~v~e~l~G  129 (326)
                      |+++. +|..|.+|++.   +.||+|+++.. ....++.|.+++++|.+..++++|+++..+...+  +..|++|++++|
T Consensus         2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G   78 (235)
T cd05155           2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG   78 (235)
T ss_pred             ceeccCCCcccceEEcC---CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence            46665 77888999983   47999998763 2346889999999998766799999998765432  356999999999


Q ss_pred             CCCC--------CcHHHHHHHHHHHhhcCCCCC-CCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393          130 GSSR--------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  200 (326)
Q Consensus       130 ~~~~--------~~~~~lg~~La~lH~~~~~~~-~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  200 (326)
                      .++.        ...+++|+.|++||+.+.+.. ..+..  ....     ......|.+...     ..+..... ..+.
T Consensus        79 ~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~-----~~~~~~~~-~l~~  145 (235)
T cd05155          79 ETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRH--NFLR-----GGDLAVRDAETR-----EAIEALEG-VIDV  145 (235)
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCc--cccC-----CCChhHhhHHHH-----HHHHHccc-ccCh
Confidence            8763        235789999999999886421 11110  0000     000112221110     00000000 0111


Q ss_pred             HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh---cCCChHhHHHh
Q 020393          201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC---AGFGGSFYNSY  276 (326)
Q Consensus       201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~---~~~~~~fl~~Y  276 (326)
                         +.+.++.+...+...  ..+++|||||||++|||+++++.++|||| ++.+|||++||+.++.   ....+.|++.|
T Consensus       146 ---~~~~~~~~~~~~~~~--~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~Dla~~~~~~~~~~~~~~~~~y  220 (235)
T cd05155         146 ---DAARALWEAALRAPW--WGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACDLAIAWTLLDEDSRAAFRAAL  220 (235)
T ss_pred             ---HHHHHHHHHHhcccc--cCCceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHHHHHHHhcCCHHHHHHHHHHc
Confidence               122222222222222  36789999999999999987777899998 5899999999997643   12236799999


Q ss_pred             hhhCCCCcCHHHHHHHH
Q 020393          277 FEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       277 ~~~~~l~~~~~~r~~~y  293 (326)
                      + ..+  + -.+|..+|
T Consensus       221 ~-~~~--~-~~~~~~~~  233 (235)
T cd05155         221 G-VDD--A-TWARGRGW  233 (235)
T ss_pred             C-CCH--H-HHHHhccc
Confidence            8 333  2 24555554

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=99.89  E-value=7.9e-22  Score=174.34  Aligned_cols=217  Identities=15%  Similarity=0.118  Sum_probs=140.2

Q ss_pred             EeEeCCccc-cceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           54 ICPVGGGCI-NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        54 v~~l~~G~~-n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .+++..|.+ |.+|+++.+++++|+|+.+..+...+..|++++++|++.  +++|+++..+.. .+..++||++++|.++
T Consensus         3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~-~~~~~lv~e~i~G~~l   79 (244)
T cd05150           3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGK--LPVPEVIDYGSD-DGRAWLLTSAVPGVPA   79 (244)
T ss_pred             ceecCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhc--CCCCeEEEEEec-CCccEEEEEeeCCccH
Confidence            467777764 899999987789999999764345578899999999976  899999987754 3678999999999875


Q ss_pred             C---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHH-Hh-hcCChH
Q 020393          133 R---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA-LD-QYGDST  201 (326)
Q Consensus       133 ~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~-~~-~~~~~~  201 (326)
                      .         ....++|+.|++||+.+...  +.+..            +   +.+....  ....++.. .. ...+..
T Consensus        80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~--~~~~~------------~---~~~~~~~--~~~~~~~~~~~~~~~~~~  140 (244)
T cd05150          80 AALWEELEPERLVDALAEALRRLHALPVAD--CPFDR------------R---LDRRLAE--ARARVENGLVDEDDFDDE  140 (244)
T ss_pred             hHhhcccCHHHHHHHHHHHHHHHhcCCccc--CCcch------------h---HHHHHHH--HHHHHhcCCcChhhCcHh
Confidence            3         23688999999999986521  11100            0   0000000  00000000 00 000100


Q ss_pred             H-HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh-h--c-----CCChH
Q 020393          202 I-YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW-C--A-----GFGGS  271 (326)
Q Consensus       202 ~-~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~-~--~-----~~~~~  271 (326)
                      . ....+.+.+.+...... ..+++|||||+|++|||+++++.++|||| .+.+|||++||+.+. .  .     +..++
T Consensus       141 ~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~~  219 (244)
T cd05150         141 RRGWSAEELYAELEATRPA-EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAAR  219 (244)
T ss_pred             hcCCCHHHHHHHHHhhCCC-cCceEEECCCCCCccEEEeCCcEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHHH
Confidence            0 00122222222221111 35789999999999999998777899998 578999999999753 1  1     12368


Q ss_pred             hHHHhhhhCCCCcCHHHHHHHHHHHH
Q 020393          272 FYNSYFEVMPKQPGFEKRRDLYMLYH  297 (326)
Q Consensus       272 fl~~Y~~~~~l~~~~~~r~~~y~l~~  297 (326)
                      |+++|+... .  + .+|+.+|.++.
T Consensus       220 f~~~Y~~~~-~--~-~~~~~~~~~~~  241 (244)
T cd05150         220 FLDRYGIDA-P--D-PEKLAYYRLLD  241 (244)
T ss_pred             HHHHcCCCC-C--C-HHHHHHHHHHh
Confidence            999997631 1  2 57888887653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=99.89  E-value=1.3e-21  Score=200.04  Aligned_cols=250  Identities=16%  Similarity=0.224  Sum_probs=158.0

Q ss_pred             CCCchhHHHHHHhcCCCc--c--eeeEeEeCCccccceEEEEeCCc----cEEEEecCCC----CcchHHHHHHHHHHHH
Q 020393           32 TLSDDPIREWILSEGKAT--H--ITKICPVGGGCINLASRYGTDAG----SFFVKTNRSI----GPSMFEGEALGLGAMY   99 (326)
Q Consensus        32 ~~~~~~i~~~l~~~~~~~--~--v~~v~~l~~G~~n~~y~v~~~~~----~~vlK~~~~~----~~~~~~~E~~~l~~L~   99 (326)
                      .++.+.+.+||.+..++.  +  ..+++++++|.+|.+|+|+..++    +||+|..+..    ....+..|+++++.|.
T Consensus        17 ~~d~~~l~~~l~~~~~~~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~   96 (822)
T PLN02876         17 RFDEDALLRYAAANVAGFPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG   96 (822)
T ss_pred             cCCHHHHHHHHHHhCCCcCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh
Confidence            478899999999763332  2  35899999999999999987653    7999998652    2245789999999998


Q ss_pred             hcCCCCCcceeeecccC--CCceEEEEeeecCCCCC-------------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcc
Q 020393          100 ETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTI  164 (326)
Q Consensus       100 ~~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~  164 (326)
                      ++.++|||+++....+.  .|..|+||||++|....             ..+.++++.|++||+.....  .|+...   
T Consensus        97 ~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~--~gl~~~---  171 (822)
T PLN02876         97 EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDA--IGLGKY---  171 (822)
T ss_pred             hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchh--cChhhc---
Confidence            65679999999875432  36899999999998531             13567999999999987632  222110   


Q ss_pred             cccccCCCC----CccHHHHHHHhhhHHHHHHHHh--hcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeee
Q 020393          165 GSTPQINKW----TSNWIEFYAEHRLGYQLKLALD--QYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISS  238 (326)
Q Consensus       165 ~~~~~~~~~----~~~w~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~  238 (326)
                      |.   ...+    ...|...+.        .....  ....+.+.+.++.+.+.++.... ...+++||||||+++|||+
T Consensus       172 g~---~~~~~~~~l~~w~~~~~--------~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~-~~~~~~LvHGD~~~~Nvl~  239 (822)
T PLN02876        172 GR---RDNYCKRQVERWAKQYL--------ASTGEGKPPRNPKMLELIDWLRENIPAEDS-TGAGTGIVHGDFRIDNLVF  239 (822)
T ss_pred             CC---CCchHHHHHHHHHHHHH--------HhhcccCCCCChhHHHHHHHHHhcCCCccc-cCCCcceEecCcccccEEE
Confidence            10   0001    111221111        00000  00112222333333333332110 0125799999999999999


Q ss_pred             cCC--CCeEEEcc-ccccCchhhhhhhh---hh-c-------------------CCC--hHhHHHhhhhCCCCcCHHHHH
Q 020393          239 DKN--GEPVILDP-ACYYGHNEAEFGMS---WC-A-------------------GFG--GSFYNSYFEVMPKQPGFEKRR  290 (326)
Q Consensus       239 ~~~--~~~~iID~-~~~~G~~~~Dla~~---~~-~-------------------~~~--~~fl~~Y~~~~~l~~~~~~r~  290 (326)
                      +++  +..+|||| .+.+|||..||+.+   ++ .                   |++  +++++.|++....+.. ...+
T Consensus       240 ~~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~e~~~~Y~~~~g~~~~-~~~~  318 (822)
T PLN02876        240 HPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQVGKGFEFTGIPEGIPSLPEYLAEYCSASGKPWP-AANW  318 (822)
T ss_pred             cCCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCccccccccccCcCCCCCCCHHHHHHHHHHHhCCCCC-Cccc
Confidence            863  34699998 58999999999964   21 1                   121  5799999998653210 1223


Q ss_pred             HHHHHHHHH
Q 020393          291 DLYMLYHYL  299 (326)
Q Consensus       291 ~~y~l~~~l  299 (326)
                      .+|..+..+
T Consensus       319 ~~~~~~~~~  327 (822)
T PLN02876        319 KFYVAFSLF  327 (822)
T ss_pred             HHHHHHHHH
Confidence            455544443

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=99.89  E-value=3e-21  Score=179.95  Aligned_cols=223  Identities=19%  Similarity=0.248  Sum_probs=144.3

Q ss_pred             cccccCCCchhHHHHHH-hcCC--CcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHH
Q 020393           27 RRTFATLSDDPIREWIL-SEGK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGE   91 (326)
Q Consensus        27 ~~~~~~~~~~~i~~~l~-~~~~--~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E   91 (326)
                      |+-|-+|+.+.+.++|. +.+.  .....+++++++|..|.+|+|+.++|  ++|||..++.          ..+....|
T Consensus         1 ~~~y~~l~~~~v~~yl~~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~E   80 (401)
T PRK09550          1 MSGYETLTEEDAVEYAALKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIE   80 (401)
T ss_pred             CCCCeeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHH
Confidence            45577899999999994 4342  22456889999999999999999877  8999997631          22446789


Q ss_pred             HHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCCCC
Q 020393           92 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDV  160 (326)
Q Consensus        92 ~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~~~  160 (326)
                      ++.|+.+.+..+..||+++..+.   +..++||||+++...           +..++++|+.||++|-....   +....
T Consensus        81 ae~L~~l~~~~p~~VPkV~~~D~---~~~~lVME~L~~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd---~~~~~  154 (401)
T PRK09550         81 AEALKIQAKYVPDLVPKVYHYDE---ELAVTVMEDLSDHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSD---FGLSS  154 (401)
T ss_pred             HHHHHHHHhhCCCCCCeEEEECC---CCCEEEEecCCCccHHHHHHhcCCccHHHHHHHHHHHHHHHhccch---hhcCh
Confidence            99999998877788999999984   578999999997541           24579999999999954432   11100


Q ss_pred             CCcccccc-cCCC----------CCccHHHHHHHhhhHHHHHHHHhh-cCChHHHHHHHHHHHHhcccccCCCCCcceee
Q 020393          161 DNTIGSTP-QINK----------WTSNWIEFYAEHRLGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLH  228 (326)
Q Consensus       161 ~~~~~~~~-~~~~----------~~~~w~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiH  228 (326)
                      ........ ..|.          ......+.. .+++.+.+....+. ..+..+...+.++...    +.  ..+.+|||
T Consensus       155 ~~~~~~~~~f~N~~l~~ite~lvft~P~~~~~-~n~~~p~l~~~~~~l~~d~~L~~~~~~L~~~----~~--~~~~~l~H  227 (401)
T PRK09550        155 EEKKALVAKFTNPELCKITEDLVFTDPYFDHE-TNNFEPELEPEVEELRADKELKLEVAKLKHK----FL--TKAEALLH  227 (401)
T ss_pred             hhhhhHHhhcCCHHHhhhhHhhccccchhhhh-hccCChhhHHHHHHHHhCHHHHHHHHHHHHH----Hh--cCCCceee
Confidence            00000000 0010          000000000 01233333322211 1233333333333332    22  35678999


Q ss_pred             cCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          229 GDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       229 gDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      ||||++||++.+++ +.|||+ .|.+|+|.+||+.+
T Consensus       228 gDl~~gni~~~~~~-~~viD~E~a~~G~~~~Dlg~~  262 (401)
T PRK09550        228 GDLHTGSIFVTEEE-TKVIDPEFAFYGPIGFDIGTF  262 (401)
T ss_pred             ccCCcccEEeeCCC-cEEEeccccccCChHHHHHHH
Confidence            99999999997764 899997 58999999999975

>PLN02756 S-methyl-5-thioribose kinase

Probab=99.89  E-value=2.4e-21  Score=179.64  Aligned_cols=223  Identities=17%  Similarity=0.171  Sum_probs=141.3

Q ss_pred             cccCCCchhHHHHHHhc------CCC-cceeeEeEeCCccccceEEEEeCCccEEEEecCCC----------CcchHHHH
Q 020393           29 TFATLSDDPIREWILSE------GKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----------GPSMFEGE   91 (326)
Q Consensus        29 ~~~~~~~~~i~~~l~~~------~~~-~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~----------~~~~~~~E   91 (326)
                      .|.+++.+.+.+|+.+.      ..+ ..+.+++++++|.+|.+|+|+++++++|||.+++.          +......|
T Consensus         5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~E   84 (418)
T PLN02756          5 EFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFE   84 (418)
T ss_pred             ccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHH
Confidence            46788999999999886      222 24678999999999999999988789999999731          22334567


Q ss_pred             HHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC--C----------CCcHHHHHHHHHHHhhcCCCCCCCCCC
Q 020393           92 ALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS--S----------RGNQSVFGKKLAEMHKAGKSSKGFGFD  159 (326)
Q Consensus        92 ~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~--~----------~~~~~~lg~~La~lH~~~~~~~~fg~~  159 (326)
                      .+.|+.+.+..+++||+++..+.   +..+++|||++|..  +          +...+++|..|++..-..+.   |+..
T Consensus        85 a~aL~~~~~~~p~~VPkVy~~de---d~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd---~~~~  158 (418)
T PLN02756         85 ATALREHGRLCPDHVPEVYHFDR---TMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSL---LYHD  158 (418)
T ss_pred             HHHHHHhhhcCCCCCCeEEEECC---CCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcch---hccC
Confidence            88888887767789999999984   57899999998832  2          13468899999987222221   1110


Q ss_pred             CCCccccccc-C-CC----------CCccHHHHHHHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHhcccccCCCCCcce
Q 020393          160 VDNTIGSTPQ-I-NK----------WTSNWIEFYAEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCL  226 (326)
Q Consensus       160 ~~~~~~~~~~-~-~~----------~~~~w~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~~~~~~L  226 (326)
                      .......... . |.          ..+.+.+.-.+....+.+....+.. .++.++..+.++..+    +-  ...++|
T Consensus       159 ~~~kk~~~~~f~~N~elc~itEdlvFt~Py~~~~~n~~~~p~l~~~~~~l~~d~~L~~~v~~Lk~~----f~--~~~~~L  232 (418)
T PLN02756        159 TTEHKRAVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDRDAEAVREDNILKLEIAELKSM----FC--ERAQAL  232 (418)
T ss_pred             hhhhhHHHHHhcCCHHHHHHHHhheeccccccchhcCCCCcchHHHHHHHhcCHHHHHHHHHHHHH----HH--hcccce
Confidence            0000000000 0 00          0000000000011112222222111 244444444444333    22  367899


Q ss_pred             eecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh
Q 020393          227 LHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       227 iHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                      +|||||+|||++.+++ +.+||+ .+++||+++||+++.
T Consensus       233 ~HGDl~~g~i~~~~~~-~~~id~ef~~~g~~~~d~g~~~  270 (418)
T PLN02756        233 VHGDLHTGSVMVTPDS-TQVIDPEFAFYGPMGFDIGAFL  270 (418)
T ss_pred             eecCCCCCcEEEcCCC-ceEecchhhccCchHHhHHHHH
Confidence            9999999999998776 899997 589999999999853

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=99.88  E-value=9.6e-22  Score=171.50  Aligned_cols=191  Identities=15%  Similarity=0.158  Sum_probs=129.3

Q ss_pred             eeEeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           52 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .+.+++++|.+|.+|+.  .++++|+|+++... ...++.|+++++.+.+. ++|||+|+..+.. .+...++|+|++|.
T Consensus         4 ~~~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~-~~~~glv~e~i~G~   79 (226)
T TIGR02172         4 SDWTQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSL-GIPTPHPFDLVED-GGRLGLIYELIVGK   79 (226)
T ss_pred             hHheeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHc-CCCCCceEEEEec-CCeeeeeeeecCCc
Confidence            45688999999999984  35689999998632 34578899999999975 7999999988654 34567899999997


Q ss_pred             C-----CC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcC
Q 020393          131 S-----SR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG  198 (326)
Q Consensus       131 ~-----~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~  198 (326)
                      +     +.       .....+|+.+++||+.+.+.  .++         +      ..+      .++...++...  ..
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~--~~l---------~------~~~------~~~~~~l~~~~--~~  134 (226)
T TIGR02172        80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT--STF---------Q------SYK------EKIRKFIEEKD--FV  134 (226)
T ss_pred             cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC--CcH---------H------HHH------HHHHHHHHhcc--CC
Confidence            4     11       23577888888999876531  111         0      000      01111111110  11


Q ss_pred             ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh-c----CCChHh
Q 020393          199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC-A----GFGGSF  272 (326)
Q Consensus       199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~-~----~~~~~f  272 (326)
                      +....+.+..+++.    +   +.++++||||+|++||++++++ .+|||| ++.+|||.+||+.++. .    .+...|
T Consensus       135 ~~~~~~~l~~~l~~----~---~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~~~~~~~~~  206 (226)
T TIGR02172       135 PKDYKEKARAFIKE----V---PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPLFDLGLLFMFCHYLDDDKLQA  206 (226)
T ss_pred             CHHHHHHHHHHHHh----C---CCCCceEecCCCCCcEEEcCCC-cEEEechhcCcCCHHHHHHHHHHhccCChhHHHHH
Confidence            21223333333322    1   3456889999999999998877 999997 5899999999997642 2    233567


Q ss_pred             HHHhhhh
Q 020393          273 YNSYFEV  279 (326)
Q Consensus       273 l~~Y~~~  279 (326)
                      +..|+..
T Consensus       207 ~~~y~~~  213 (226)
T TIGR02172       207 IFHMNAE  213 (226)
T ss_pred             HHhcCHH
Confidence            8888853

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=99.88  E-value=5e-21  Score=171.84  Aligned_cols=214  Identities=13%  Similarity=0.111  Sum_probs=137.7

Q ss_pred             HhcCCCcceeeEeEeCCccccceEEEEeC-CccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           43 LSEGKATHITKICPVGGGCINLASRYGTD-AGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        43 ~~~~~~~~v~~v~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .+.|+...+.++...+.|..|.+|+|... +.+||+|+.+... ...++.|.++++.|..+.++|+|+++..+     ..
T Consensus         5 ~~~~~~~~~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~-----~~   79 (276)
T cd05152           5 RKHGLTLKPETLSLNESGLDFQVVFAKDTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT-----PE   79 (276)
T ss_pred             hhcCCccCCCcceecCCcceeEEEEEEcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec-----Cc
Confidence            34466556677888888889999999764 4489999997522 34578999999999987788999877543     34


Q ss_pred             EEEEeeecCCCCC--------------------CcHHHHHHHHHHHhhcCCCC-CCCCCCCCCcccccccCCCCCccHHH
Q 020393          121 YIIMEFIEFGSSR--------------------GNQSVFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKWTSNWIE  179 (326)
Q Consensus       121 ~~v~e~l~G~~~~--------------------~~~~~lg~~La~lH~~~~~~-~~fg~~~~~~~~~~~~~~~~~~~w~~  179 (326)
                      +++|++++|.++.                    ..+.++|+.|++||+.+... ...|++..           .......
T Consensus        80 ~~~y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~-----------~~~~~~~  148 (276)
T cd05152          80 LIAYPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVE-----------TPEEVRQ  148 (276)
T ss_pred             eEEEeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCC-----------CHHHHHH
Confidence            7788888887541                    13578999999999988632 11121110           0011111


Q ss_pred             HHHHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEcc-ccccCch
Q 020393          180 FYAEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDP-ACYYGHN  256 (326)
Q Consensus       180 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~-~~~~G~~  256 (326)
                      .     +...++...... ......+.+.+.+.... ..   ..+++|||||+|++|||++++ +.++|||| ++.+|||
T Consensus       149 ~-----~~~~l~~~~~~~~~~~~l~~~~~~~L~~~~-~~---~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP  219 (276)
T cd05152         149 T-----MADRMDRVKEEFGVSEALWNRWQAWLDDDS-YW---PRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP  219 (276)
T ss_pred             H-----HHHHHHHHHHhcCCCHHHHHHHHHHHhhcC-CC---CCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence            1     111111111111 12222222222222111 11   356899999999999999874 45799998 6899999


Q ss_pred             hhhhhhhh-hc--CCChHhHHHhhhhCC
Q 020393          257 EAEFGMSW-CA--GFGGSFYNSYFEVMP  281 (326)
Q Consensus       257 ~~Dla~~~-~~--~~~~~fl~~Y~~~~~  281 (326)
                      ++||+.++ ..  ...++|+++|++...
T Consensus       220 a~Dla~~~~~~~~~~~~~~~~~Y~~~~g  247 (276)
T cd05152         220 ARDFVLHYRIFGEAGLERLIDAYEAAGG  247 (276)
T ss_pred             HHHHHHHHHhcChHHHHHHHHHHHHcCC
Confidence            99999763 22  234789999998664

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=99.88  E-value=3.9e-21  Score=175.91  Aligned_cols=224  Identities=16%  Similarity=0.130  Sum_probs=142.2

Q ss_pred             cceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCceEEEEeeecCCCCC----
Q 020393           63 NLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSSR----  133 (326)
Q Consensus        63 n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----  133 (326)
                      +.+|+|+|++|+||||..+.. ...+..|..++++|+++ +++||+++......     ++..|.+++|++|.+..    
T Consensus        10 ~~v~~v~t~~g~~~LK~~~~~-~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~   87 (313)
T TIGR02906        10 RNVYKVETDSGNKCLKKINYP-PERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECDFNNP   87 (313)
T ss_pred             ccEEEEEeCCCCeEEEEcCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhccCcCCCCCCH
Confidence            458999999999999997532 33456789999999987 57999999875432     46789999999998753    


Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH--hhhHHHHHHHHhhc-CC---hHHHHHHH
Q 020393          134 GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQY-GD---STIYQRGH  207 (326)
Q Consensus       134 ~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~--~~l~~~~~~~~~~~-~~---~~~~~~~~  207 (326)
                      .+++++|+.||+||.....   |..+...    .+.  .....|.+.+..  ..+....+...... .+   ....+.++
T Consensus        88 ~~~~~~g~~La~lH~~~~~---~~~~~~~----~~~--~~~~~w~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  158 (313)
T TIGR02906        88 IDLKKAAKGLALFHHASKG---YVPPDGS----KIR--SKLGKWPKQFEKRLKELERFKKIALEKKYKDEFDKLYLKEVD  158 (313)
T ss_pred             HHHHHHHHHHHHHHHhCCC---CCCCCcc----hhh--ccccchHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHH
Confidence            4579999999999999864   2111110    000  011234433321  11222222211111 11   10111111


Q ss_pred             H-------HHHHhc-----ccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh---hh---cCC
Q 020393          208 R-------LMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS---WC---AGF  268 (326)
Q Consensus       208 ~-------l~~~~~-----~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~---~~---~~~  268 (326)
                      .       .++.+.     ++......+.++||||+|++||++++ +..+|||+ .+.+|++++||+.+   ++   ..+
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~~~~~  237 (313)
T TIGR02906       159 YFLERGKKALELLNKSKYYDLCKEAKKIRGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDLPVRDLRKLIIKLMKKNGVW  237 (313)
T ss_pred             HHHHHHHHHHHHHhhCcHHHHHHhhcCcCceEcCCCCcccEEEeC-CcEEEEECcccccCCcHHHHHHHHHHHHHhccCC
Confidence            2       211111     11111134689999999999999987 45799998 58999999999964   23   234


Q ss_pred             C----hHhHHHhhhhCCCCcCHHHHHHHHHHHHH
Q 020393          269 G----GSFYNSYFEVMPKQPGFEKRRDLYMLYHY  298 (326)
Q Consensus       269 ~----~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~  298 (326)
                      .    .+|+++|++..|+++...+.+..+.++..
T Consensus       238 d~~~~~~~l~gY~~~~~L~~~e~~~l~~~l~~p~  271 (313)
T TIGR02906       238 DLEKAKEIIEAYSSINPLSKEEKEVLYIDLAFPH  271 (313)
T ss_pred             CHHHHHHHHHHhhccCCCCHHHHHHHHHHHhChH
Confidence            4    57999999999999776666665554443

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=99.88  E-value=6e-22  Score=172.99  Aligned_cols=192  Identities=26%  Similarity=0.366  Sum_probs=119.9

Q ss_pred             eEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CCceEEEEeeecC
Q 020393           53 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIMEFIEF  129 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G  129 (326)
                      +|+++++|..|.+|+|++++++||+|..+.. ....+..|.+++++|++. ++|||+++..+...  .+..+++|++++|
T Consensus         1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~-~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEH-GIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             -EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHT-TSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             CCccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhc-CCCCceEEeecccccccccceEEEEEecc
Confidence            4789999999999999999999999999764 345678999999999987 56999999854332  3567999999999


Q ss_pred             CCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH--hhhHHHHHHHHhhcC
Q 020393          130 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE--HRLGYQLKLALDQYG  198 (326)
Q Consensus       130 ~~~~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~--~~l~~~~~~~~~~~~  198 (326)
                      .++.         ....++|+.|++||+...+...+                  ..+......  ...............
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (239)
T PF01636_consen   80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPF------------------ADWPEWRLEFLRQLESWTARLRASEL  141 (239)
T ss_dssp             EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCH------------------THHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccccccccccccchhhhhhccccccccccc------------------ccccccccccccccccccccccchhh
Confidence            8642         24688999999999996321100                  011111100  001110000000001


Q ss_pred             ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeec-CCCCeEEEcc-ccccCchhhhhhhhh
Q 020393          199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-KNGEPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~-~~~~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                      .....+..+++.+.+...+.. ..+.++||||+|++|||++ +++..+|||| .+.+|+|++|++.+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~  208 (239)
T PF01636_consen  142 FDDLEELEERLLQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLL  208 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHH
Confidence            111112222244444433322 3688999999999999998 3343489997 689999999999764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=99.87  E-value=1.3e-20  Score=169.95  Aligned_cols=232  Identities=19%  Similarity=0.215  Sum_probs=146.7

Q ss_pred             CCchhHHHHHHhcCCCc-ceeeEeEeCCccccceEEEEeCCccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCc
Q 020393           33 LSDDPIREWILSEGKAT-HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAP  107 (326)
Q Consensus        33 ~~~~~i~~~l~~~~~~~-~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP  107 (326)
                      ++.+.+..++....++. ....++...+|++|.+|++..++.+||||.++..    .......|.++++.+... ++|+|
T Consensus         8 ~~~~~l~~~l~~~ip~~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~-~vP~p   86 (321)
T COG3173           8 LDIAALAAYLRSQIPGYAGLLIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKREYRVIAALLDV-DVPVP   86 (321)
T ss_pred             CCHHHHHHHHHhhCcCcCCCceeeeccCCcccceEEEecCCceEEEecCCccccchhhhHHHhHHHHHHHhcCC-CCCCc
Confidence            55678889998775543 3455666789999999999888789999944321    123345677777777664 67888


Q ss_pred             ceeeecccCC-CceEEEEeeecCCCC---------C-CcHH-HHHHHHHHHhhcCCCC-CCCCCCCCCcccccccCCCCC
Q 020393          108 RPFKVGALPT-GGSYIIMEFIEFGSS---------R-GNQS-VFGKKLAEMHKAGKSS-KGFGFDVDNTIGSTPQINKWT  174 (326)
Q Consensus       108 ~~~~~~~~~~-~~~~~v~e~l~G~~~---------~-~~~~-~lg~~La~lH~~~~~~-~~fg~~~~~~~~~~~~~~~~~  174 (326)
                      +++....... |.+|+||+|++|+..         . .... ++++.|+.||+++... +.+|.+.. +.+  .+.    
T Consensus        87 ~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~-~~~--rql----  159 (321)
T COG3173          87 RAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNA-YRG--RQL----  159 (321)
T ss_pred             ccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCc-ccc--chh----
Confidence            8877654433 688999999999632         1 2345 8999999999999521 12221111 111  011    


Q ss_pred             ccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-cccc
Q 020393          175 SNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY  253 (326)
Q Consensus       175 ~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~  253 (326)
                      ..|...+.     ...+..  ....+....+...+.+..+.  .  +.+++++|||+|++|+|+++++.++|||| .+.+
T Consensus       160 ~~~~~~~~-----~~~~~~--~~~~p~~~~~~~Wl~~~~p~--~--~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         160 ARWDDEYR-----RAKKEL--GGRIPLADRLIKWLEANRPP--W--AGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             hHHHHHHH-----HHHHhc--cCCCchHHHHHHHHHhcCCC--c--CCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            22222221     000000  01112222222222222221  1  57899999999999999999888999998 5789


Q ss_pred             Cchhhhhhhh-hh--c------CCC------hHhHHHhhhhCCCC
Q 020393          254 GHNEAEFGMS-WC--A------GFG------GSFYNSYFEVMPKQ  283 (326)
Q Consensus       254 G~~~~Dla~~-~~--~------~~~------~~fl~~Y~~~~~l~  283 (326)
                      |||..||+.+ |.  .      .+.      ..+++.|++...++
T Consensus       229 GDP~~Dl~~~~W~~~~~~~~~~~~~~~~~~~~~l~a~y~~~~G~~  273 (321)
T COG3173         229 GDPLEDLAIICWTIFDEPAARAIFRLGVPALDELLATYARARGLA  273 (321)
T ss_pred             CCcHHHHHHHHhccccchhhhhhcccCcccHHHHHHHHHHhcCcc
Confidence            9999999977 63  1      111      35778898887765

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.86  E-value=2.2e-20  Score=162.01  Aligned_cols=191  Identities=18%  Similarity=0.225  Sum_probs=127.1

Q ss_pred             eEeEeCCccccceEEEEeCC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~~~~v~e  125 (326)
                      +++++++|..|.+|++++.+ .+||+|+.+..    ....++.|.++++.+++. ++++|+++......  .+..+++|+
T Consensus         2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             cceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEE
Confidence            46889999999999999987 58999998753    235678999999999886 68999999877542  246799999


Q ss_pred             eecCCCCCC--------------cHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHH
Q 020393          126 FIEFGSSRG--------------NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK  191 (326)
Q Consensus       126 ~l~G~~~~~--------------~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~  191 (326)
                      |++|.++..              .+.++|+.|++||+...+.  .+....   +.      . ..+.   . ..+..+.+
T Consensus        81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--~~~~~~---~~------~-~~~~---~-~~~~~~~~  144 (223)
T cd05154          81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAA--VGLGDL---GR------P-GGYL---E-RQVARWRR  144 (223)
T ss_pred             EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhh--cCCccc---CC------C-CchH---H-HHHHHHHH
Confidence            999986531              1478999999999988632  221100   00      0 0000   0 11222221


Q ss_pred             HHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecC--CCCeEEEcc-ccccCchhhhhhhh
Q 020393          192 LALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       192 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~--~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      .........  ...++++.+.+.+.+.. ..+.++||||+|++|||+++  ++.++|||| .+.+|+|++||+.+
T Consensus       145 ~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~  216 (223)
T cd05154         145 QYDASRTDE--PPAMERLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWL  216 (223)
T ss_pred             HHHhhcccc--cHHHHHHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHH
Confidence            111110000  01222233333322332 25789999999999999988  555799997 68999999999975

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK06148 hypothetical protein; Provisional

Probab=99.86  E-value=7.6e-20  Score=189.76  Aligned_cols=239  Identities=13%  Similarity=0.116  Sum_probs=160.4

Q ss_pred             CCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhc-CCCCCcce
Q 020393           33 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYET-RTIRAPRP  109 (326)
Q Consensus        33 ~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~-~~~~vP~~  109 (326)
                      ++.+++.+.+.++ +|.. .++++++ |..|.+|+|+++++ .||+|+.++. ....++.|.+++.+|+++ .++|||++
T Consensus        11 ~s~~~~~~~~~~~-ygl~-~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~   87 (1013)
T PRK06148         11 FTTKDAEALLAQH-FGIS-ATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRL   87 (1013)
T ss_pred             CCHHHHHHHHHHH-cCCc-eEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCee
Confidence            5778999999887 3433 3467785 56799999999877 8999999753 345567788899999875 36899999


Q ss_pred             eeecccC--------CC--ceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393          110 FKVGALP--------TG--GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  172 (326)
Q Consensus       110 ~~~~~~~--------~~--~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~  172 (326)
                      +......        +|  ..+.+++|++|.++.       ...+++|+.||+||.....   |..+...      ....
T Consensus        88 i~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~---F~~p~~~------r~~~  158 (1013)
T PRK06148         88 IPSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQG---FMHPGAL------RDLD  158 (1013)
T ss_pred             eecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhc---CCCCCcc------cccc
Confidence            9764331        22  467899999998752       3479999999999999753   4322110      1122


Q ss_pred             CCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcc----cccCCCCCcceeecCCCCCCeeecCCC---CeE
Q 020393          173 WTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP----LFEGVNVEPCLLHGDLWSGNISSDKNG---EPV  245 (326)
Q Consensus       173 ~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~l~~~~~~~~LiHgDl~~~NiL~~~~~---~~~  245 (326)
                      |......     .+...+.    ...++..++.++++.+.+.+    .+.  ..+..+||||++++|||+++++   .++
T Consensus       159 Wdl~~~~-----~l~~~l~----~i~d~~~r~~l~~~~~~~~~~v~p~l~--~Lp~~vIHgDln~~NiLv~~~~~~~isG  227 (1013)
T PRK06148        159 WDLRHAG-----RARDRLH----FIDDPEDRALVERFLARFERNVAPRLA--ALPAQVIHNDANDYNILVDADDGERISG  227 (1013)
T ss_pred             cccccch-----hhhhhhh----hcCCHHHHHHHHHHHHHHHHHHHHHHh--cCCcceECCCCCcccEEEcCCCCcceEE
Confidence            3211000     1111111    11233334444444444332    222  3577899999999999999773   579


Q ss_pred             EEcc-ccccCchhhhhhhhh--h--cCC-----ChHhHHHhhhhCCCCcCHHHHHHHHH
Q 020393          246 ILDP-ACYYGHNEAEFGMSW--C--AGF-----GGSFYNSYFEVMPKQPGFEKRRDLYM  294 (326)
Q Consensus       246 iID~-~~~~G~~~~Dla~~~--~--~~~-----~~~fl~~Y~~~~~l~~~~~~r~~~y~  294 (326)
                      |||| ++++++.++|||+..  +  ...     ..+|++||++.+|+++.+.+.+....
T Consensus       228 iIDFgDa~~~~~v~DLAialay~~~~~~~p~~~~~a~laGY~sv~pLt~~E~~~L~~li  286 (1013)
T PRK06148        228 LIDFGDAVHAPRICEVAIAAAYAILDHPDPIGAAAALVAGYHAVYPLQAQELDLLFDLI  286 (1013)
T ss_pred             EEECcccccccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence            9998 699999999999652  2  111     14799999999999987666555443

>PRK06149 hypothetical protein; Provisional

Probab=99.85  E-value=6.5e-20  Score=190.10  Aligned_cols=238  Identities=15%  Similarity=0.142  Sum_probs=157.9

Q ss_pred             CCchhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCC-CCcchHHHHHHHHHHHHhc-CCCCCcce
Q 020393           33 LSDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS-IGPSMFEGEALGLGAMYET-RTIRAPRP  109 (326)
Q Consensus        33 ~~~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~-~~~~vP~~  109 (326)
                      ++.+++++++.+. ++.   -++++++ |..|.+|+|++++++||||+.++ .....+..|.+++++|+++ .+++||+|
T Consensus        17 ls~~~~~~ll~~~ygl~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~~~~~l~~e~~~l~hL~~~~~glpvp~p   92 (972)
T PRK06149         17 VSEAQAERILAEHYGLS---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAYAAVELEAQHAALRHLAEREPALRVPVV   92 (972)
T ss_pred             CCHHHHHHHHHHhcCCc---eEEEecC-CcCcceEEEEecCCcEEEEeCCccCChHHHHHHHHHHHHHHhhCCCCCCcee
Confidence            6789999999755 443   2456674 66789999999889999999975 2345677899999999876 36999999


Q ss_pred             eeecccC---------CCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC
Q 020393          110 FKVGALP---------TGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW  173 (326)
Q Consensus       110 ~~~~~~~---------~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~  173 (326)
                      +......         .+..+.+++|++|..+.       ..++++|+.+|+||.....   |.  .+...    ....|
T Consensus        93 i~t~~G~~~~~~~~~g~~~~vrL~~~l~G~~~~~~~~~~~~~~~~lG~~lArlh~al~~---f~--hp~~~----r~~~W  163 (972)
T PRK06149         93 IPALDGEELLTLDVRGQGLRVRLLDYLPGQPLTRLGHLAPASVAGLGALCARVARALAD---FD--HPGLD----RTLQW  163 (972)
T ss_pred             eECCCCCeEEEEecCCceEEEEEEEecCCccccccCCCCHHHHHHHHHHHHHHHHHHcC---CC--CCCCC----Ccccc
Confidence            9865432         13468899999997652       3579999999999999974   32  22110    01123


Q ss_pred             CccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH----HHhcccccCCCCCcceeecCCCCCCeeecCCC-----Ce
Q 020393          174 TSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM----KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EP  244 (326)
Q Consensus       174 ~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-----~~  244 (326)
                      ...  . . ...+...+    ....++..++.+++..    +.+.....  ..+..+||||++.+||+|+++.     .+
T Consensus       164 dl~--~-~-~~~~~~ll----~~i~d~~~r~~l~~~~~~~~~~l~~~~~--~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~  233 (972)
T PRK06149        164 DLR--H-A-GPVVAHLL----SHITDPAQRARIAEATRDAARRLQPLAP--ALPLQAVHLDITDDNVVGSRDADGRWQPD  233 (972)
T ss_pred             chh--h-h-HHHHHHHH----hhcCCHHHHHHHHHHHHHHHHHhhhhhh--hCcccccCCCCCcccEEEcCCCCCCccee
Confidence            110  0 0 00011111    1111222233333333    33333232  3578999999999999998652     35


Q ss_pred             EEEcc-ccccCchhhhhhhh---hhc--CC----ChHhHHHhhhhCCCCcCHHHHHHHH
Q 020393          245 VILDP-ACYYGHNEAEFGMS---WCA--GF----GGSFYNSYFEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       245 ~iID~-~~~~G~~~~Dla~~---~~~--~~----~~~fl~~Y~~~~~l~~~~~~r~~~y  293 (326)
                      +|||| ++.+++..+|||+.   ++.  ..    ..+|++||++++|+++.+.+.+...
T Consensus       234 giIDFgD~~~~~~i~DLAial~~~~~~~~~dp~~~~~~l~GY~svrpLt~~E~~~L~~l  292 (972)
T PRK06149        234 GVIDFGDLVRTWRVADLAVTCASLLHHAGGDPFSILPAVRAYHAVRPLSEAELKALWPL  292 (972)
T ss_pred             EEEEcccchhhhHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            99998 79999999999974   231  11    1469999999999998766554443

>PRK12396 5-methylribose kinase; Reviewed

Probab=99.85  E-value=1.6e-20  Score=173.27  Aligned_cols=227  Identities=15%  Similarity=0.155  Sum_probs=146.5

Q ss_pred             ccccccccCCCchhHHHHHHhc-CC--CcceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---------CcchHH
Q 020393           24 FSKRRTFATLSDDPIREWILSE-GK--ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFE   89 (326)
Q Consensus        24 ~~~~~~~~~~~~~~i~~~l~~~-~~--~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~   89 (326)
                      +|+|..|-+++.+.+.+++.+. +.  ..+..+++++++|..|.||||...  .+.+|||.+.+.         +.....
T Consensus         1 ~~~~~~y~~l~~~~v~~yl~~~l~~~~~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~   80 (409)
T PRK12396          1 MSKFTKYFLMEANDVIVYVKEKLSKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIR   80 (409)
T ss_pred             CCccccceeCCHhHHHHHHHHhcCCCCCcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHH
Confidence            4678889999999999999885 42  223345999999999999999864  458999988531         234567


Q ss_pred             HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCC
Q 020393           90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGF  158 (326)
Q Consensus        90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~  158 (326)
                      .|.++|+.+.+..|-.||++|..+.   ....++||+++....           +..++++|+.||+.|-..+.   |+.
T Consensus        81 ~E~~aL~~~~~~~P~~VP~vy~~D~---e~~~~vMEdL~~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd---~~l  154 (409)
T PRK12396         81 IESDVLQLEEELAPGLVPKVYLFDS---VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSD---VVM  154 (409)
T ss_pred             HHHHHHHHHHhhCCCcCCeEEEECc---HHhhHHHHhCcccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcch---hcc
Confidence            8999999998876667999999984   588999999975321           25679999999999886642   211


Q ss_pred             CC------------CCcccccccCCCCCccHHHHHHHhh-hHHHHHHHHhh-cCChHHHHHHHHHHHHhcccccCCCCCc
Q 020393          159 DV------------DNTIGSTPQINKWTSNWIEFYAEHR-LGYQLKLALDQ-YGDSTIYQRGHRLMKNLAPLFEGVNVEP  224 (326)
Q Consensus       159 ~~------------~~~~~~~~~~~~~~~~w~~~~~~~~-l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~  224 (326)
                      +.            +..+..... --..+.+.+.-..++ ..+.+....+. ..|..++..+.++...    +-  ....
T Consensus       155 ~~~~kk~~v~~f~N~eLc~ited-lvft~Py~~~~~~n~~~~~~~~~~~~~l~~D~~Lk~ev~~Lk~~----F~--~~~~  227 (409)
T PRK12396        155 NHKEKKELVKNYINPELCEITED-LVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRLEVAKLKFS----FM--TNAQ  227 (409)
T ss_pred             ChHHHHHhhHhcCCHHHHHHhcc-cccccCcccchhccCCCChhhHHHHHHHhcCHHHHHHHHHHHHH----HH--hcch
Confidence            11            000000000 000000000000000 11111111111 1233333333333332    22  3577


Q ss_pred             ceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh
Q 020393          225 CLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       225 ~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                      +|||||||+|||++++++ +.|||+ .+++|++.+||+.+.
T Consensus       228 aLlHGDlHtGSI~v~~~~-~kvIDpEFAfyGP~gFDiG~~l  267 (409)
T PRK12396        228 ALIHGDLHTGSVFVKNDS-TKVIDPEFAFYGPMGYDIGNVM  267 (409)
T ss_pred             hhccCcCCCCCEEecCCc-eEEEcccccccCCcHHHHHHHH
Confidence            999999999999998775 899996 689999999999763

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=99.85  E-value=3.9e-20  Score=169.21  Aligned_cols=239  Identities=13%  Similarity=0.091  Sum_probs=145.5

Q ss_pred             HHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCccee-eecccC--
Q 020393           40 EWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF-KVGALP--  116 (326)
Q Consensus        40 ~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~-~~~~~~--  116 (326)
                      +++.++  +.++.+++++    .|.+|+|.|++|.||+|..... ...+.....++++|+++ |+++|.++ ......  
T Consensus         3 ~vl~~Y--~l~v~~i~~~----~~~v~~v~T~~G~~~Lk~~~~~-~~~l~~~~~~~~~L~~~-G~~~~~~~~~t~~G~~~   74 (309)
T TIGR02904         3 AVLEHY--GLQPEEMEQV----TGKLFKVYTDQGVFALKKLYAD-RNTIESFVSQIQVLSEK-GFSRIVPVYPTKDGSYY   74 (309)
T ss_pred             hhHhhc--CCCceeeecc----cCcEEEEEeCCCCEEEEEeccc-hHhHHHHHHHHHHHHHc-CCCcCCceeecCCCCee
Confidence            456555  4467777554    4688999999999999998743 34455677888999887 67765555 433321  


Q ss_pred             ---CCceEEEEeeecCCCC---CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHH
Q 020393          117 ---TGGSYIIMEFIEFGSS---RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL  190 (326)
Q Consensus       117 ---~~~~~~v~e~l~G~~~---~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~  190 (326)
                         ++..|++|+|++|...   ...+.++|+.||+||..+.+.....  ......   ....+...|....  ..+....
T Consensus        75 ~~~~~~~~~L~~wi~G~~~~~~~~~~~~~~~~LA~lH~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~--~~l~~~~  147 (309)
T TIGR02904        75 LFHGHFLYYLMPWLDIERNEERNYQHESMFQELALLHRKTVKTERVT--EEELKK---HYERTLSRWENIP--EGLEEFI  147 (309)
T ss_pred             eEECCEEEEEeCCcccccccCCHHHHHHHHHHHHHHHHhhhCCCccc--HhHHHh---HHHHHHHHHHHHH--HHHHHHH
Confidence               4667999999999643   2457999999999999997421111  000000   0011112232111  0112222


Q ss_pred             HHHHh-hcCC----------hHHHHHHHHHHHHhcccc----cCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccC
Q 020393          191 KLALD-QYGD----------STIYQRGHRLMKNLAPLF----EGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYG  254 (326)
Q Consensus       191 ~~~~~-~~~~----------~~~~~~~~~l~~~~~~~l----~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G  254 (326)
                      +.... ...+          ......++.+.+.+..+.    .....+.++||||++++|+|+++++..+|||| .+++|
T Consensus       148 ~~~~~~~~~~~fe~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       148 VEAEAKWYMSPFELQACTYYHEVMQAAEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDETRGGYFINFEKASFA  227 (309)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence            11111 0111          011222333333222221    11135779999999999999988888899998 58999


Q ss_pred             chhhhhhhhh---h--cCCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393          255 HNEAEFGMSW---C--AGFG----GSFYNSYFEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       255 ~~~~Dla~~~---~--~~~~----~~fl~~Y~~~~~l~~~~~~r~~~y  293 (326)
                      +|++||+...   .  ..+.    .+++++|++.+|+++...+.+..+
T Consensus       228 ~~~~DLa~~~~~~~~~~~~~~~~~~~~l~~Y~~~~pL~~~E~~~l~~~  275 (309)
T TIGR02904       228 SPLTDLAAFFRRSFGTYPQPIDEMFEWFYTYEKTLPLTDEEIHLLTSY  275 (309)
T ss_pred             CcHHHHHHHHHHHHhhCCCChHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            9999999542   1  2232    589999999999987644434333

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=99.84  E-value=5.2e-20  Score=161.73  Aligned_cols=195  Identities=16%  Similarity=0.185  Sum_probs=119.9

Q ss_pred             eEeEeCCccccceEEEEeCC---ccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           53 KICPVGGGCINLASRYGTDA---GSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~---~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      +++++.+|.+|.+|+|++.+   ++||+|++.....  ...+.|..+++.+++. ++ +|+++....     ..++|||+
T Consensus         2 ~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-gl-~P~v~~~~~-----~~~l~e~i   74 (235)
T cd05157           2 TFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-GL-APKLYATFQ-----NGLIYEFI   74 (235)
T ss_pred             eEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-CC-CCeEEEEeC-----CcEEEEee
Confidence            68899999999999999873   5899999875322  2235799999999876 45 899886542     25899999


Q ss_pred             cCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHh--hcC
Q 020393          128 EFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD--QYG  198 (326)
Q Consensus       128 ~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~--~~~  198 (326)
                      +|.++.       ....++|+.|++||+.....   ......    .+....| +....+..  .+.........  ...
T Consensus        75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~---~~~~~~----~~~~~~~-~~i~~~~~--~~~~~~~~~~~~~~~~  144 (235)
T cd05157          75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPE---AISSPG----TPKPILW-PTIRKWIN--LVPTEFKKPEKFQKKT  144 (235)
T ss_pred             CCCcCCHHHccChHHHHHHHHHHHHHhcccccc---cccccC----CCCCcHH-HHHHHHHH--HhHHhhccccchhhhh
Confidence            998763       34688999999999988642   110000    0000001 11111110  01100000000  000


Q ss_pred             ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecC-CCCeEEEcc-ccccCchhhhhhhhh
Q 020393          199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK-NGEPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~-~~~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                      .....+.+.+....+...+.....+.++||||++++|||+++ ++..++||| .+.+|+|.+|||.+.
T Consensus       145 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~  212 (235)
T cd05157         145 KAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHF  212 (235)
T ss_pred             ccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHH
Confidence            000111222222223222322235689999999999999987 466899998 599999999999753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=99.83  E-value=2.7e-19  Score=163.12  Aligned_cols=196  Identities=15%  Similarity=0.152  Sum_probs=119.6

Q ss_pred             eEeEeCCccccceEEEEeCC--------ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           53 KICPVGGGCINLASRYGTDA--------GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--------~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      +++++.+|.+|.+|+|+..+        ++||+|++....  ......|.++++.|++.+  .+|+++....     ...
T Consensus         2 ~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g--~~P~~~~~~~-----~~~   74 (302)
T cd05156           2 EVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERN--LGPKLYGIFP-----NGR   74 (302)
T ss_pred             eEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCC--CCCceEEEeC-----CCc
Confidence            68899999999999999865        589999987532  234578999999999873  5899998763     246


Q ss_pred             EEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHh
Q 020393          123 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD  195 (326)
Q Consensus       123 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~  195 (326)
                      |++|++|..+.       ....++|+.|++||+.....  .+....    ..+....+...|.....  ..........+
T Consensus        75 v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  146 (302)
T cd05156          75 IEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPL--SPEERD----LTPAIWKLLKQWLDLAE--TVIEIVDSDSE  146 (302)
T ss_pred             hhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCC--CCCcCc----ccchHHHHHHHHHHHhh--hhhhhcccchh
Confidence            89999998753       24689999999999988641  010000    00000000011110000  00000000000


Q ss_pred             hcCCh---HHHHHHHHHHHHhcccccC-CCCCcceeecCCCCCCeeecCC----CCeEEEcc-ccccCchhhhhhhh
Q 020393          196 QYGDS---TIYQRGHRLMKNLAPLFEG-VNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       196 ~~~~~---~~~~~~~~l~~~~~~~l~~-~~~~~~LiHgDl~~~NiL~~~~----~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      .....   ...+.+..+.+.+...... ...+.++||||++++|||++++    +...+||| .+.+|+|.+|||.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~  223 (302)
T cd05156         147 KLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANH  223 (302)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHH
Confidence            00000   0111222222222211110 1367899999999999999874    66899997 69999999999974

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.83  E-value=2.2e-19  Score=149.46  Aligned_cols=152  Identities=20%  Similarity=0.206  Sum_probs=111.5

Q ss_pred             eEeEeCCccccceEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           53 KICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .++++++|..|.+|+++.++++|++|+++...  ...++.|+.+++.+.+.  ..+|+++..+.   +..++||||++|.
T Consensus         2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~P~~~~~~~---~~~~lv~e~i~G~   76 (170)
T cd05151           2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEA--GIGPKLYYFDP---ETGVLITEFIEGS   76 (170)
T ss_pred             ceeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh--CCCCceEEEeC---CCCeEEEEecCCC
Confidence            57899999999999999988899999987542  23467899999999875  34899998763   3568999999998


Q ss_pred             CCCCc-------HHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393          131 SSRGN-------QSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  203 (326)
Q Consensus       131 ~~~~~-------~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  203 (326)
                      ++...       ..++++.|++||+..                                                     
T Consensus        77 ~l~~~~~~~~~~~~~l~~~l~~LH~~~-----------------------------------------------------  103 (170)
T cd05151          77 ELLTEDFSDPENLEKIAKLLKKLHSSP-----------------------------------------------------  103 (170)
T ss_pred             ccccccccCHHHHHHHHHHHHHHhCCC-----------------------------------------------------
Confidence            65321       112222222222211                                                     


Q ss_pred             HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh-cCCC----hHhHHHhh
Q 020393          204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC-AGFG----GSFYNSYF  277 (326)
Q Consensus       204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~-~~~~----~~fl~~Y~  277 (326)
                                       ..+.++||||++++||+++ ++...+||| .+.+|+|.+||+.++. ..++    .+|++.|.
T Consensus       104 -----------------~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~y~  165 (170)
T cd05151         104 -----------------LPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDPLFDLANFFSEAKLSEDQEEELLEAYF  165 (170)
T ss_pred             -----------------CCCceeecCCCCcCcEEEE-CCeEEEEecccccCCChHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence                             1267999999999999998 445889998 5889999999997642 2332    57999998


Q ss_pred             hhC
Q 020393          278 EVM  280 (326)
Q Consensus       278 ~~~  280 (326)
                      ...
T Consensus       166 ~~~  168 (170)
T cd05151         166 GRE  168 (170)
T ss_pred             CCC
Confidence            654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN02236 choline kinase

Probab=99.78  E-value=5.2e-17  Score=150.44  Aligned_cols=235  Identities=19%  Similarity=0.180  Sum_probs=145.6

Q ss_pred             chhHHHHHHhcCCCc------ceeeEeEeCCccccceEEEEeCC------ccEEEEecCCCCcch--HHHHHHHHHHHHh
Q 020393           35 DDPIREWILSEGKAT------HITKICPVGGGCINLASRYGTDA------GSFFVKTNRSIGPSM--FEGEALGLGAMYE  100 (326)
Q Consensus        35 ~~~i~~~l~~~~~~~------~v~~v~~l~~G~~n~~y~v~~~~------~~~vlK~~~~~~~~~--~~~E~~~l~~L~~  100 (326)
                      ...|.+++.+..+..      +..+++++.||.+|.+|+++..+      .+||+|++.......  ...|..+++.+++
T Consensus        16 ~~~~~~~~~~~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~   95 (344)
T PLN02236         16 PDELKRILHSLASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSR   95 (344)
T ss_pred             hHHHHHHHHHhcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHH
Confidence            355667777664433      46789999999999999998532      379999997643211  3679999999998


Q ss_pred             cCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC
Q 020393          101 TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW  173 (326)
Q Consensus       101 ~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~  173 (326)
                      . ++ .|+++....   +  ..+++|++|.++.       ....++++.|++||+...+..    ...            
T Consensus        96 ~-gl-~P~~~~~~~---~--g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~----~~~------------  152 (344)
T PLN02236         96 H-GQ-GPRLLGRFP---N--GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGP----KNV------------  152 (344)
T ss_pred             c-CC-CCceEEEEC---C--ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCC----CCc------------
Confidence            6 45 899997763   2  2689999998763       235799999999999875210    000            


Q ss_pred             CccHHHHHHHhhhHHHHHHHHhhcCCh----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEc
Q 020393          174 TSNWIEFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILD  248 (326)
Q Consensus       174 ~~~w~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID  248 (326)
                       ..|.      ++..+++...+...+.    ...+.+...++.+...+.....+.++||+|++++|||++++ +...+||
T Consensus       153 -~~~~------~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID  225 (344)
T PLN02236        153 -LLWD------RLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIID  225 (344)
T ss_pred             -hHHH------HHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEe
Confidence             1111      1222221111100000    00111222222222222222357799999999999999864 5689999


Q ss_pred             c-ccccCchhhhhhhhhh---cCC--------------C----hHhHHHhhhhCC--CCc----CHHHHHHHHHHHHHH
Q 020393          249 P-ACYYGHNEAEFGMSWC---AGF--------------G----GSFYNSYFEVMP--KQP----GFEKRRDLYMLYHYL  299 (326)
Q Consensus       249 ~-~~~~G~~~~Dla~~~~---~~~--------------~----~~fl~~Y~~~~~--l~~----~~~~r~~~y~l~~~l  299 (326)
                      | ++.+|+|.+|||...+   ..+              +    ..|++.|.+...  .++    .+..++.+|.+...+
T Consensus       226 ~Eya~~~~~~~Dia~~~~e~~~~y~~~~~~~~~~~~~~~~~~~~~fi~~Yl~~~g~~~~~~~~~~l~~~v~~~~~~~~l  304 (344)
T PLN02236        226 YEYASYNPVAYDIANHFCEMAADYHSETPHILDYSKYPGEEERRRFIRTYLSSSGEEPSDEEVEQLLDDVEKYTLASHL  304 (344)
T ss_pred             ehhccccchHHHHHHHHHHHHHhhcCCCcccCchhhCcCHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhhHhHH
Confidence            7 6899999999996532   211              1    368999986432  221    244455566555444

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=99.75  E-value=3.2e-17  Score=149.79  Aligned_cols=195  Identities=21%  Similarity=0.239  Sum_probs=119.7

Q ss_pred             EeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           56 PVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .+++|..|.||||..+++  ++|||.+.+.          +......|.++|+.+.+..|-.||++|..+.   ....++
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~---e~~~~v   78 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT---EMAVTV   78 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc---ccceeh
Confidence            578999999999998764  7999988531          2344567899998888765556999999984   588999


Q ss_pred             EeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCccccccc-CCC----------CCccHHHHH
Q 020393          124 MEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQ-INK----------WTSNWIEFY  181 (326)
Q Consensus       124 ~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~-~~~----------~~~~w~~~~  181 (326)
                      ||+++....           +..++++|+.||+.|-..+.   +..+.......... .|.          ..+.+.+..
T Consensus        79 MEdL~~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd---~~~~~~~kk~l~~~f~N~eLc~itEdlvft~py~~~~  155 (370)
T TIGR01767        79 MEDLSHHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSD---YALEPKVKKALVAQFTNPELCDITERLVFTDPYFDHD  155 (370)
T ss_pred             HhhCccchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcc---cccCHHHHHHHHHHhCCHHHHHHHHHhccccchhhhh
Confidence            999975321           25679999999999855531   22111000000000 000          000100000


Q ss_pred             HHhhhHHHHHHHHhhc-CChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhh
Q 020393          182 AEHRLGYQLKLALDQY-GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAE  259 (326)
Q Consensus       182 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~D  259 (326)
                       .++..+.++...+.. .++.+...+.+    +...+.  ....+|||||||++||++.+++ ..+||+ .+.+|++.+|
T Consensus       156 -~n~~~p~l~~~~~~l~~d~~l~~~v~~----Lk~~f~--~~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~~~~D  227 (370)
T TIGR01767       156 -TNDFEEELRPFVAKLRNDDSLKIEAAK----LKHSFL--ASAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGPIGFD  227 (370)
T ss_pred             -hhcCChhHHHHHHHHhcCHHHHHHHHH----HHHhhc--cCcceeeeccCCcccEEEcCCC-CEEEcCcccccCchHhh
Confidence             011223332222111 12222222222    222222  3577999999999999997765 789997 5899999999


Q ss_pred             hhhhh
Q 020393          260 FGMSW  264 (326)
Q Consensus       260 la~~~  264 (326)
                      |+.+.
T Consensus       228 lg~~i  232 (370)
T TIGR01767       228 IGQFI  232 (370)
T ss_pred             HHHHH
Confidence            99763

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=99.75  E-value=8.4e-17  Score=148.33  Aligned_cols=200  Identities=18%  Similarity=0.244  Sum_probs=128.4

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-----cEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-----~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ...+++++.||.+|.+|+|+..++     +||+|++...+...  .+.|..+++.+++. ++ .|+++....  .|   +
T Consensus        15 ~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~-gl-~P~~l~~~~--~G---~   87 (330)
T PLN02421         15 SDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA-GF-GAKLLGVFG--NG---M   87 (330)
T ss_pred             CceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc-CC-CCceeEEeC--Cc---E
Confidence            467899999999999999986532     89999997643222  35799999999886 34 588887653  12   5


Q ss_pred             EEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHh
Q 020393          123 IMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALD  195 (326)
Q Consensus       123 v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~  195 (326)
                      |.+|++|..+.       .....+++.|++||+...+.   . ..+             .-|.      ++..+++.+..
T Consensus        88 i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~---~-~~~-------------~~~~------~i~~y~~~~~~  144 (330)
T PLN02421         88 IQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPG---S-KEP-------------QLWN------DIFKFYEKAST  144 (330)
T ss_pred             eehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCC---C-CCC-------------cHHH------HHHHHHHHhhh
Confidence            99999998763       24689999999999987531   0 000             1111      11122211111


Q ss_pred             -hcCChHH--------HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEcc-ccccCchhhhhhhhh
Q 020393          196 -QYGDSTI--------YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       196 -~~~~~~~--------~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                       ...++..        ...+.+.+..+..++.....+.++||+|++++|||++++ +...+||+ .+.++||.+|||...
T Consensus       145 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f  224 (330)
T PLN02421        145 VKFEDPEKQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHF  224 (330)
T ss_pred             cccCcHHHhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHH
Confidence             0001000        111122222223333322467899999999999999754 56899996 699999999999753


Q ss_pred             h--cCC--------C----hHhHHHhhhh
Q 020393          265 C--AGF--------G----GSFYNSYFEV  279 (326)
Q Consensus       265 ~--~~~--------~----~~fl~~Y~~~  279 (326)
                      +  .++        +    ..|++.|...
T Consensus       225 ~E~~~~~~~~~~~p~~~~~~~fl~~Y~~~  253 (330)
T PLN02421        225 NEYAGFDCDYSLYPSKEEQYHFFRHYLRP  253 (330)
T ss_pred             HHHcccccCcccCcCHHHHHHHHHHhCCc
Confidence            2  111        1    3689999854

>PTZ00296 choline kinase; Provisional

Probab=99.71  E-value=2.4e-15  Score=142.99  Aligned_cols=208  Identities=11%  Similarity=0.028  Sum_probs=129.3

Q ss_pred             cCCCchhHHHHHHhcCCCc-----ceeeEeEeCCccccceEEEEeCC----------ccEEEEecCCCCcch--HHHHHH
Q 020393           31 ATLSDDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPSM--FEGEAL   93 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~~~~~-----~v~~v~~l~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~~--~~~E~~   93 (326)
                      +.++.+.+..++.+..+++     +-++++++.||.+|.+|++++.+          .+|++|++...+...  ...|..
T Consensus        82 ~~~~~~~~~~i~~~~vp~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~  161 (442)
T PTZ00296         82 DLTDPLYIKKICLEKVPEWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFE  161 (442)
T ss_pred             ccCChHHHHHHHHHHCCccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHH
Confidence            3456666777776543332     12499999999999999998752          379999997643322  356899


Q ss_pred             HHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccc
Q 020393           94 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGS  166 (326)
Q Consensus        94 ~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~  166 (326)
                      +++.|++. + -.|+++...     ..+.|.+|++|.++.       ....++++.|++||+...... .  +.  ..+.
T Consensus       162 v~~~ls~~-g-i~P~l~~~f-----~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~-~--~~--~f~~  229 (442)
T PTZ00296        162 VYKTMSKY-R-IAPQLLNTF-----SGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRH-L--PE--HWDR  229 (442)
T ss_pred             HHHHHHHC-C-CCCceEEEe-----CCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhccccccc-C--ch--hccC
Confidence            99999886 3 478888554     347789999998653       346899999999999863210 0  00  0000


Q ss_pred             cccCCCCCccHHHHHHHhhhHHHHHHHHhhcC-C------hHHHHHHHHHHHHhcc--cccCCCCCcceeecCCCCCCee
Q 020393          167 TPQINKWTSNWIEFYAEHRLGYQLKLALDQYG-D------STIYQRGHRLMKNLAP--LFEGVNVEPCLLHGDLWSGNIS  237 (326)
Q Consensus       167 ~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~-~------~~~~~~~~~l~~~~~~--~l~~~~~~~~LiHgDl~~~NiL  237 (326)
                      .|      .-|.      ++..++..+.+... .      ..+.+.+..+.+.+..  .+.....+.++||+|+.++|||
T Consensus       230 ~p------~~f~------~i~~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL  297 (442)
T PTZ00296        230 TP------CIFK------MMEKWKNQLSKYKNIEKYQRDIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNII  297 (442)
T ss_pred             CC------cHHH------HHHHHHHHHHhhccchHhHhhHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCcccee
Confidence            01      1111      12222222111000 0      0112222323222211  0112235789999999999999


Q ss_pred             ecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          238 SDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       238 ~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      ..+++ ..+||| .|.+.+|++|||..
T Consensus       298 ~~~~~-l~LIDfEYAg~ndpafDIAn~  323 (442)
T PTZ00296        298 NTNKC-LRLIDFEYSGYNFLATDIANF  323 (442)
T ss_pred             ecCCC-EEEEeecccccccHHHHHHHH
Confidence            86555 889997 69999999999965

>PRK10271 thiK thiamine kinase; Provisional

Probab=99.62  E-value=1.1e-14  Score=121.70  Aligned_cols=170  Identities=12%  Similarity=0.154  Sum_probs=105.8

Q ss_pred             EEEeeecCCCCC--CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCC
Q 020393          122 IIMEFIEFGSSR--GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD  199 (326)
Q Consensus       122 ~v~e~l~G~~~~--~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~  199 (326)
                      ++.+|++|++.+  ....+++..++++|+.+.    +|.+.+                   +. .++..+.........+
T Consensus         1 llv~Wl~Ge~~~~~~~~~~La~~l~~LH~~p~----~~~~~~-------------------l~-~~i~~Yw~~l~~~~~~   56 (188)
T PRK10271          1 MAVDYLPGEVKSYLPDTNELAGLLYHLHQQPR----FGWRIT-------------------LL-PLLEQYWQQSDPARRT   56 (188)
T ss_pred             CcccccCCCcCCCccCHHHHHHHHHHHhcCCC----CCCCCC-------------------HH-HHHHHHHHHhccccCC
Confidence            467999999875  358999999999999775    443211                   00 2344444444322223


Q ss_pred             hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhhcC--CChHhHHHh
Q 020393          200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWCAG--FGGSFYNSY  276 (326)
Q Consensus       200 ~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~~~--~~~~fl~~Y  276 (326)
                      +....    ............+.+.++||||++|+|+++++++ ..+||+ ++..|||.+|||.++...  -.+.|++.|
T Consensus        57 ~~wl~----~~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~DLa~~~~~~~~~~~~~l~~Y  131 (188)
T PRK10271         57 PFWLR----MLKRLRKAGEPRPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDY  131 (188)
T ss_pred             HHHHH----HHHHHHhcccCCCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCHHHHHHHHHcCCHHHHHHHHHHH
Confidence            22222    2222222222224678999999999999998777 779997 689999999999875421  125799999


Q ss_pred             hhhCCCCcC-HHHHHHHHHHHHHHH-------HHHHh-ccCcHHHHHHHHHHH
Q 020393          277 FEVMPKQPG-FEKRRDLYMLYHYLN-------HYNLF-GSGYRSSALSIIDDY  320 (326)
Q Consensus       277 ~~~~~l~~~-~~~r~~~y~l~~~l~-------~~~~~-~~~~~~~~~~~~~~~  320 (326)
                      +...-.+.. +..|+..+..+..+.       ++... ...|...+..+.+++
T Consensus       132 ~~~~~~d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~d~~fl~~a~~~~~~~  184 (188)
T PRK10271        132 ATRAKIDAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTGDQQFIRLADDTWRQL  184 (188)
T ss_pred             hCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhh
Confidence            854334443 445555544333322       23333 456888888777755

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]

Probab=99.61  E-value=1.9e-14  Score=121.34  Aligned_cols=210  Identities=16%  Similarity=0.150  Sum_probs=142.8

Q ss_pred             EeEeCCcccc-ceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393           54 ICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  131 (326)
Q Consensus        54 v~~l~~G~~n-~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~  131 (326)
                      .+++..|.+. .+||+..+.+ -+++|+.+......+..|.+.++|++.+ ++++|+|+..... .++.|++|+.++|.+
T Consensus        23 w~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a~L~~Ea~RlrWla~~-~l~~P~V~~~~~~-~~~~wLl~salpG~~  100 (266)
T COG3231          23 WRRVTEGESGAGVFRLFADSRPGLYLKIASSGPAAELEGEAARLRWLAGQ-GLGCPRVLGLEDD-ADQAWLLMSALPGED  100 (266)
T ss_pred             cceeeccCCCCeEEEEeccCCCceEEEEecCcchhhhhhHHHHHHHhccc-CCCCCceEeeccC-cchhHHhhhhcCCCc
Confidence            4456666554 6999887554 6889998765556788999999999987 6999999998764 579999999999997


Q ss_pred             CC---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCC---
Q 020393          132 SR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD---  199 (326)
Q Consensus       132 ~~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~---  199 (326)
                      ..         ..+..+++.|..||..+...+.|+....                      .++....+.......+   
T Consensus       101 ~s~~~~~~~p~r~v~~la~aLR~LH~l~~~aCPFd~rl~----------------------~rl~~a~~r~~a~~vdesd  158 (266)
T COG3231         101 ASHPRYALDPKRAVPLLAEALRRLHELPVEACPFDRRLA----------------------RRLAKARARVRAGLVDESD  158 (266)
T ss_pred             ccchhhcCCHHHHHHHHHHHHHHHhcCChhhCCcchHHH----------------------HHHHHHHHHHhccCCChhh
Confidence            62         3467889999999998875444432110                      1111111000000001   


Q ss_pred             --h-----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh-hh-----
Q 020393          200 --S-----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-WC-----  265 (326)
Q Consensus       200 --~-----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~-~~-----  265 (326)
                        +     ...++.+++.+..    .. ....++||||-..-|+|+++++-+|+||. +...||...||+.. |.     
T Consensus       159 fd~e~qgr~~~El~d~L~~~r----p~-~edLVv~HGDACLPN~i~d~~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl  233 (266)
T COG3231         159 FDEERQGRTAEELFDELEARR----PA-VEDLVVTHGDACLPNFILDGWRFSGFIDLGRLGVADRHQDLALATWSLRFNL  233 (266)
T ss_pred             cChhhcCCCHHHHHHHHHhcC----Cc-hhhceeecCcccCcceEecCCceEEeeecCcccchHHHHhHHHHHHHHHhcc
Confidence              0     0123333333322    21 35679999999999999988876899997 67899999999965 31     


Q ss_pred             c--CCChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          266 A--GFGGSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       266 ~--~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      +  .+.+.|+..|.... .+   ..|+.+|.+.
T Consensus       234 ~g~~~~~~fl~~Yg~~~-~d---~~rl~~yr~l  262 (266)
T COG3231         234 GGDVWDDPFLDAYGRGA-ID---PARLAYYRLL  262 (266)
T ss_pred             CcchhhHHHHHHhCcCC-CC---HHHHHHHHHH
Confidence            1  24578999998432 12   4788888754

>PTZ00384 choline kinase; Provisional

Probab=99.60  E-value=7.8e-14  Score=130.42  Aligned_cols=203  Identities=13%  Similarity=0.058  Sum_probs=124.6

Q ss_pred             chhHHHHHHhcCCCc-----ceeeEeEeCCccccceEEEEeCCc---c-----EEEEecCCCCcc--hHHHHHHHHHHHH
Q 020393           35 DDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTDAG---S-----FFVKTNRSIGPS--MFEGEALGLGAMY   99 (326)
Q Consensus        35 ~~~i~~~l~~~~~~~-----~v~~v~~l~~G~~n~~y~v~~~~~---~-----~vlK~~~~~~~~--~~~~E~~~l~~L~   99 (326)
                      ...+.+++.+.-++.     +..+++++.||.+|.+|+|+.+++   .     +++|.+.....-  ..+.|.++++.|+
T Consensus        31 ~~~~~~~~~~~~p~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls  110 (383)
T PTZ00384         31 HSNLKSLCIRHVPFWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLG  110 (383)
T ss_pred             HHHHHHHHHHHCCccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHH
Confidence            355667777764433     346899999999999999986543   3     455665432211  1256899999998


Q ss_pred             hcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393          100 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  172 (326)
Q Consensus       100 ~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~  172 (326)
                      +.  --.|+++....     .++++||++|..+.       .....+++.|++||+....   +.   +...+..|    
T Consensus       111 ~~--glgP~l~~~f~-----~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~---~~---p~~~~~~p----  173 (383)
T PTZ00384        111 DN--NFGPKIIGRFG-----DFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTE---LV---PKEWDRTP----  173 (383)
T ss_pred             hC--CCCCeEEEecC-----CEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhccccc---CC---CccccCcc----
Confidence            86  35899998763     37999999999764       2467999999999997642   10   00000011    


Q ss_pred             CCccHHHHHHHhhhHHHHHHHH---hh---cCC-hHHHHHHHHHHHHhcccccC---CCCCcceeecCCCCCCeeecCCC
Q 020393          173 WTSNWIEFYAEHRLGYQLKLAL---DQ---YGD-STIYQRGHRLMKNLAPLFEG---VNVEPCLLHGDLWSGNISSDKNG  242 (326)
Q Consensus       173 ~~~~w~~~~~~~~l~~~~~~~~---~~---~~~-~~~~~~~~~l~~~~~~~l~~---~~~~~~LiHgDl~~~NiL~~~~~  242 (326)
                        ..|.      ++..++....   ..   ..+ ..+.+.++.+...+...+..   ...+.++||.|++++|||.++++
T Consensus       174 --~~~~------~i~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~~~~  245 (383)
T PTZ00384        174 --MFLT------KISTWSQHVERIIKKYNLDFDYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDFNQG  245 (383)
T ss_pred             --hHHH------HHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEecCCC
Confidence              1111      1111111110   00   011 11222333332222221211   12467999999999999986554


Q ss_pred             CeEEEcc-ccccCchhhhhhhh
Q 020393          243 EPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       243 ~~~iID~-~~~~G~~~~Dla~~  263 (326)
                       ..+||+ .|.+++|.+|||..
T Consensus       246 -l~lID~EYA~~n~~~fDLAn~  266 (383)
T PTZ00384        246 -IYFIDFDFAGFNYVGWEIANF  266 (383)
T ss_pred             -EEEEEeccccCCchHhHHHHH
Confidence             889996 69999999999965

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=99.58  E-value=9.4e-14  Score=130.97  Aligned_cols=223  Identities=17%  Similarity=0.236  Sum_probs=136.5

Q ss_pred             cCCCchhHHHHHHhc-C----CCcceeeEeEeC--CccccceEEEEeC-----Cc-----cEEEEecCCC----------
Q 020393           31 ATLSDDPIREWILSE-G----KATHITKICPVG--GGCINLASRYGTD-----AG-----SFFVKTNRSI----------   83 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~-~----~~~~v~~v~~l~--~G~~n~~y~v~~~-----~~-----~~vlK~~~~~----------   83 (326)
                      |+++|+++.+-+++. +    +| +-++++.|+  .|..+.+.+|+.+     ++     ++|||+.+..          
T Consensus        11 Thvtw~dve~~l~~~l~t~a~~g-~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~   89 (414)
T PF07914_consen   11 THVTWEDVEEALQEALGTKAKFG-ENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMK   89 (414)
T ss_pred             CceeHHHHHHHHHHHhCCCcCcC-CCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhc
Confidence            789999999999876 3    23 456777776  5679999999852     11     7999998520          


Q ss_pred             -------Cc-c-----------hHHHHHHHHHHHHhc--CCCCCcceeeecccCC---CceEEEEeeecCCCC-------
Q 020393           84 -------GP-S-----------MFEGEALGLGAMYET--RTIRAPRPFKVGALPT---GGSYIIMEFIEFGSS-------  132 (326)
Q Consensus        84 -------~~-~-----------~~~~E~~~l~~L~~~--~~~~vP~~~~~~~~~~---~~~~~v~e~l~G~~~-------  132 (326)
                             +. .           .-.+|+..++.+...  .++|+|++|......+   ..++++|||+++...       
T Consensus        90 ~~~~~~~~~e~~~~~~~~~l~~~HNrEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e~~  169 (414)
T PF07914_consen   90 FEGGKGFDEEKEWEEFEKFLREMHNREVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYENL  169 (414)
T ss_pred             cccccccchhhHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccCCC
Confidence                   00 1           113678888888765  3789999998765432   369999999998642       


Q ss_pred             C-CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC-CccHHHHHHHhhhHHHHHHHHhhc---CChHHHHHHH
Q 020393          133 R-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAEHRLGYQLKLALDQY---GDSTIYQRGH  207 (326)
Q Consensus       133 ~-~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~-~~~w~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~  207 (326)
                      + .+..++++.||++|+.+...+.-..  ....|     ..+ ...+..++....+...........   .++.+.+.++
T Consensus       170 ~~eql~~iv~aLA~~~A~sl~ls~ee~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~  242 (414)
T PF07914_consen  170 SVEQLLQIVRALAKFHALSLKLSEEEK--KSISG-----PDFLEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIE  242 (414)
T ss_pred             CHHHHHHHHHHHHHHHHhHccCCHHHh--hhccC-----chHHHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHH
Confidence            1 6789999999999998874210000  00000     001 001112221111222222221111   1122222222


Q ss_pred             HHHHH------------hcccccCCCCCcceeecCCCCCCeeecCCC-----CeEEEcc-ccccCchhhhhhhhh
Q 020393          208 RLMKN------------LAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       208 ~l~~~------------~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-----~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                      .+...            +.+.+   ..+++|||||||..|||++.++     ..+|||| .+..|.|..||+.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~i~~~l---G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll  314 (414)
T PF07914_consen  243 KFEHYLPDIKNFEKASNINKQL---GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLL  314 (414)
T ss_pred             HHHHhcccHHhHHHHhhhHHhc---CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHH
Confidence            22211            11111   3589999999999999999853     2489997 679999999999764

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>TIGR02905 spore_yutH spore coat protein YutH

Probab=99.57  E-value=3e-13  Score=123.83  Aligned_cols=222  Identities=14%  Similarity=0.128  Sum_probs=139.1

Q ss_pred             CCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-CcceeeecccC-----CCce
Q 020393           47 KATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APRPFKVGALP-----TGGS  120 (326)
Q Consensus        47 ~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~-vP~~~~~~~~~-----~~~~  120 (326)
                      +|..+.++.+.  |   .+..+.|++|.|+||.....+...+.....++++|.++ +++ ||.++.+....     +|..
T Consensus         8 Y~l~~~~~~~~--g---~~~~~~t~~g~y~Lk~~e~~~~~~l~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~~~~g~~   81 (313)
T TIGR02905         8 FGLYCDERFRV--G---RYEAFRANNQAYLIVPVDGLEEEELAELMAMSDYLQQA-GDETVLELVKTKFGQSSALIDGVS   81 (313)
T ss_pred             hCcCcccceec--C---ceeeEEeCCceEEEEEecCCCHHHHHHHHHHHHHHHHc-CCCcccceeecCCCCEeEEECCEE
Confidence            36678888886  3   25667899999999999544444566778889999887 576 99999876543     5899


Q ss_pred             EEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhc-CC
Q 020393          121 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY-GD  199 (326)
Q Consensus       121 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~-~~  199 (326)
                      |++++|++|.....  ..+|+.||+||..+..   |..+..+.    .....|...|.....  ++....+.+..+. .+
T Consensus        82 y~L~~w~~~~~~~~--~~~~~~LA~lH~as~~---f~~~~~~~----~~~~~~~~~~~k~~~--el~~~~~~~~~~~~~s  150 (313)
T TIGR02905        82 YYLFKAPEFNERRG--VDLGRELATFHKRGRQ---YPRPIWKK----SRIGQWKELWAKRLD--QLEDWWQSLLAQGPQT  150 (313)
T ss_pred             EEEEeCCCcccchh--HHHHHHHHHHHHhcCC---CCCCcccc----ccccccHHHHHHHHH--HHHHHHHHHHhcCCCC
Confidence            99999988765322  3999999999999974   32221110    011233333332221  2332222221111 11


Q ss_pred             h----------HHHHHHHHHHHHhc-----ccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhh
Q 020393          200 S----------TIYQRGHRLMKNLA-----PLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSW  264 (326)
Q Consensus       200 ~----------~~~~~~~~l~~~~~-----~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~  264 (326)
                      +          ...+..+..++.+.     .+-.. ....++||||+...|++ +++ ..++||++..+++|..||+...
T Consensus       151 ~Fd~~fl~~~d~~~~~a~~ai~~l~~s~y~~~~~~-~~~~~lCH~d~~~hn~l-~~~-~~~~i~~d~~~D~~~~DL~~fi  227 (313)
T TIGR02905       151 LFDEQFLETFPYYLGLTENAIQYAADTELDDEPGL-ADSGTICHERFGETTWL-ERG-GLIKPPTEWVYDHPARDLAEWI  227 (313)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHccchhhhhc-cccCccccCccCccccc-cCC-CeEecccccccccchhHHHHHH
Confidence            1          11223333333221     11111 24669999999999987 444 4778887667999999999541


Q ss_pred             ---h-c--C--CC--hHhHHHhhhhCCCCcCHHH
Q 020393          265 ---C-A--G--FG--GSFYNSYFEVMPKQPGFEK  288 (326)
Q Consensus       265 ---~-~--~--~~--~~fl~~Y~~~~~l~~~~~~  288 (326)
                         + .  .  +.  ..++++|++..||++...+
T Consensus       228 rk~~~k~~~~~~~~~~~~l~~Y~~~~pL~~~e~~  261 (313)
T TIGR02905       228 RERYMGEIRQNQRAIASFLQEYEQAAPLTPFSWR  261 (313)
T ss_pred             HHHHHHhccccHHHHHHHHHHhhhcCCCCHHHHH
Confidence               2 1  1  22  4789999999999875433

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.56  E-value=1.1e-13  Score=111.73  Aligned_cols=144  Identities=25%  Similarity=0.268  Sum_probs=103.7

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ++.++.|..+.+|+++.+++.+++|...... ...+..|..+++.+... +.++|+++..... .+..+++|||++|..+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~-~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARK-GLPVPKVLASGES-DGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHc-CCCCCeEEEEcCC-CCccEEEEEecCCeec
Confidence            4678899999999999888899999986532 24578899999999876 6889999987654 4689999999998755


Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHH
Q 020393          133 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN  212 (326)
Q Consensus       133 ~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  212 (326)
                      ...              ..                       ..+.      .+.                ..+.+.++.
T Consensus        81 ~~~--------------~~-----------------------~~~~------~~~----------------~~~~~~l~~  101 (155)
T cd05120          81 DEV--------------SE-----------------------EEKE------DIA----------------EQLAELLAK  101 (155)
T ss_pred             ccC--------------CH-----------------------HHHH------HHH----------------HHHHHHHHH
Confidence            322              10                       0000      000                011111222


Q ss_pred             hcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          213 LAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       213 ~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      +.   .  ....+++|||++++||++++++...++|+ .+.++++.+|++.+
T Consensus       102 lh---~--~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~d~~~~  148 (155)
T cd05120         102 LH---Q--LPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAFDLAAA  148 (155)
T ss_pred             Hh---C--CCceEEEecCCCcceEEEECCcEEEEEecccccCCChHHHHHHH
Confidence            11   1  12368999999999999988677899997 58899999999965

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=99.47  E-value=3e-12  Score=112.84  Aligned_cols=214  Identities=16%  Similarity=0.125  Sum_probs=127.4

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHH---HHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec-C
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEA---LGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE-F  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~---~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~-G  129 (326)
                      .++.+|..+.|+.|++.+| +.|+|+..+...  ...|.   ..|++....   -+.+++..+   .....+++|++. |
T Consensus         8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~--~~~E~~g~~~L~~w~G~---GaVrll~~d---~~~~AlLLErl~~g   79 (253)
T PF04655_consen    8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE--AEHEARGEAALRWWNGR---GAVRLLAAD---PERGALLLERLDPG   79 (253)
T ss_pred             CCCCCCcceEEEEEEcCCCCeEEEEecCCccc--chhhhhHHhHhheeCCC---Cceeeeccc---cccchhhhhhccCC
Confidence            3466789999999998887 899999986322  23444   446655443   356888887   358899999995 5


Q ss_pred             CCCC---------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393          130 GSSR---------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  200 (326)
Q Consensus       130 ~~~~---------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  200 (326)
                      .++.         +....++..+++||.........++         +.    ..+|...+..     ........ .+ 
T Consensus        80 ~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~~~~~p~~l---------~~----l~~~~~~l~~-----~~~~~~~~-~~-  139 (253)
T PF04655_consen   80 RSLASLPREGDDDEATRIAAGLLRRLHRPAPEPLPSGL---------PP----LADWFARLFA-----RARERAGA-PP-  139 (253)
T ss_pred             CchhhcccccCchHHHHHHHHHHHHHhCCCCCCCCccc---------hh----HHHHHHHHHH-----HhHhhhcc-cc-
Confidence            5542         2357889999999987642100011         00    1222222211     11111100 11 


Q ss_pred             HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhhhc---CC----C----
Q 020393          201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCA---GF----G----  269 (326)
Q Consensus       201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~~~---~~----~----  269 (326)
                        ..++++..+...+++.+ +.+.+++|||||++|||-...+.-..||+....|+|+||++.+.+.   ..    .    
T Consensus       140 --~~l~~~a~~~~~~Ll~~-~~~~~lLHGDLH~~NIL~~~~~~WlaIDPkgl~Gdp~yd~a~~l~n~~~~~~~~~~~~~i  216 (253)
T PF04655_consen  140 --RRLVDAAAALARELLAS-PGEEVLLHGDLHHGNILAAGRRGWLAIDPKGLVGDPAYDLAPLLRNPLDELPDADDPERI  216 (253)
T ss_pred             --HHHHHHHHHHHHHHhcC-CCcceeeccccchHhhhccCCCCceEeCCcccccccccCHHHHHhCccccccccccHHHH
Confidence              12333333333444443 4567999999999999986644345799999999999999965432   11    1    


Q ss_pred             hHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHH
Q 020393          270 GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHY  302 (326)
Q Consensus       270 ~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~  302 (326)
                      ...++...+...++   .+|+.-|.+...+..+
T Consensus       217 ~~r~~~la~~~gld---~~R~~~W~~~~~vlsa  246 (253)
T PF04655_consen  217 RRRAALLAEAAGLD---RERILAWAFARAVLSA  246 (253)
T ss_pred             HHHHHHHHHHHCcC---HHHHHHHHHHHHHHHH
Confidence            12344444555555   3566666655554333

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=99.45  E-value=7.2e-13  Score=120.32  Aligned_cols=219  Identities=17%  Similarity=0.227  Sum_probs=120.9

Q ss_pred             CCccccceEEEEeCC-----c-----cEEEEecCCC--------CcchHHHHHHHHHHHHhcC----------CCCCcce
Q 020393           58 GGGCINLASRYGTDA-----G-----SFFVKTNRSI--------GPSMFEGEALGLGAMYETR----------TIRAPRP  109 (326)
Q Consensus        58 ~~G~~n~~y~v~~~~-----~-----~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~----------~~~vP~~  109 (326)
                      |+|..+.+|||+.+.     +     .+|+|..+..        ....+++|..+++.+....          ...+|++
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~   81 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC   81 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence            467788888877522     1     6999998731        1355788998887664211          1247999


Q ss_pred             eeecccCCCceEEEEeeecCCCC---------C-CcHHHHHHHHHHHhhcCCCCCC-----CCCCCCCcccccccCCCCC
Q 020393          110 FKVGALPTGGSYIIMEFIEFGSS---------R-GNQSVFGKKLAEMHKAGKSSKG-----FGFDVDNTIGSTPQINKWT  174 (326)
Q Consensus       110 ~~~~~~~~~~~~~v~e~l~G~~~---------~-~~~~~lg~~La~lH~~~~~~~~-----fg~~~~~~~~~~~~~~~~~  174 (326)
                      +..+.. .+..++|||.|.....         + +.++.+.+.||++|+.+.....     ++.......... ....-.
T Consensus        82 ~~~~~~-~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  159 (294)
T PF02958_consen   82 YYADED-PGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAASWALEEKDPELFEELSSGLFEEP-FFREEL  159 (294)
T ss_pred             EEeccC-CCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhCchhhhhccccceecc-chhhhh
Confidence            988743 3468999999964321         1 4578899999999998863211     110000000000 000000


Q ss_pred             ccHHHHHHHhhhHHHHHHHHhhcC-----ChHHHHHHHHHHHHhccccc-CCCCCcceeecCCCCCCeeecCCC-----C
Q 020393          175 SNWIEFYAEHRLGYQLKLALDQYG-----DSTIYQRGHRLMKNLAPLFE-GVNVEPCLLHGDLWSGNISSDKNG-----E  243 (326)
Q Consensus       175 ~~w~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~l~-~~~~~~~LiHgDl~~~NiL~~~~~-----~  243 (326)
                      ..|..-+....+....+.......     ...+......+.+....+.. ......+|||||+|.+|||+..++     .
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nNilf~~~~~g~~~~  239 (294)
T PF02958_consen  160 EEWFEEFFEQGLKAFIESLDDEWPEYEEYSEKLEALLDKFFERMQELVDPSKEPFNVLCHGDFWTNNILFKYDDDGKPID  239 (294)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHhccccCCceEEEcCccCHHhEeEcccccccccc
Confidence            111111111111111111111100     01122333334444433332 124567999999999999997652     3


Q ss_pred             eEEEcc-ccccCchhhhhhhhhhcCCC--------hHhHHHhhh
Q 020393          244 PVILDP-ACYYGHNEAEFGMSWCAGFG--------GSFYNSYFE  278 (326)
Q Consensus       244 ~~iID~-~~~~G~~~~Dla~~~~~~~~--------~~fl~~Y~~  278 (326)
                      ..+||| .+.+|.|+.||+.+.+...+        +.+++.|.+
T Consensus       240 ~~liDfQ~~~~g~p~~Dl~~fl~~s~~~~~r~~~~~~ll~~Y~~  283 (294)
T PF02958_consen  240 VVLIDFQLARYGSPAIDLAYFLYTSLDPELRREHEDELLRHYHE  283 (294)
T ss_pred             ceeeccccccCCCcHhHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence            689997 68999999999976432222        356666654

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=99.37  E-value=1.2e-12  Score=113.21  Aligned_cols=168  Identities=20%  Similarity=0.184  Sum_probs=90.8

Q ss_pred             ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHH
Q 020393           73 GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKL  143 (326)
Q Consensus        73 ~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~L  143 (326)
                      .+||+|++...+...  ...|..+++.+++.  --.|+++.....     ..+++|++|.++.       .....+++.|
T Consensus         3 ~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~--g~~p~~~~~~~~-----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l   75 (211)
T PF01633_consen    3 EKYLVRIPGEGTENFIDRENENEALKLLSEA--GLGPKIIYFFEN-----GRVEEFIEGRTLSPEDFRNPEILKRIAKLL   75 (211)
T ss_dssp             SEEEEEEEESCGCSHHHHHHHHHHHHHHHHT--TSSS-EEEEETT-----EEEEE--SSEE--CGGGGSHHHHHHHHHHH
T ss_pred             CEEEEEeCCCCcccccCHHHHHHHHHHHHHc--CCCCeEEEEcCC-----CcEEEEecccccChhhccChHHHHHHHHHH
Confidence            479999997653323  35688899999875  358899987632     4678999998763       2358999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH-hhhHHHHHHHHhhcCCh---HHHHHHHHHHHHhcccccC
Q 020393          144 AEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE-HRLGYQLKLALDQYGDS---TIYQRGHRLMKNLAPLFEG  219 (326)
Q Consensus       144 a~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~-~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~l~~  219 (326)
                      ++||+...+.  .. ...         .-| ..+..+... ....  ....  .....   .....+...+..+.+.+..
T Consensus        76 ~~lH~~~~~~--~~-~~~---------~~~-~~i~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~~  138 (211)
T PF01633_consen   76 AKLHSIPISP--NS-KKP---------DLW-DRIDKYMNKKSEFL--FKRK--KKKKSIDKEDLEDLQEELEELEKLLEK  138 (211)
T ss_dssp             HHHHTHHHTT--SS-SS----------HHH-HHHHHHHHHHHTCC--CCHH--TTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhhccccc--cc-Ccc---------hHH-HHhhhhccchhhhh--hhhh--hhccccccCCHHHHHHHHhhhhhhhhc
Confidence            9999988611  00 000         000 011111000 0000  0000  00000   0111122222223333322


Q ss_pred             CCCCcceeecCCCCCCeee-cCCCCeEEEcc-ccccCchhhhhhhhh
Q 020393          220 VNVEPCLLHGDLWSGNISS-DKNGEPVILDP-ACYYGHNEAEFGMSW  264 (326)
Q Consensus       220 ~~~~~~LiHgDl~~~NiL~-~~~~~~~iID~-~~~~G~~~~Dla~~~  264 (326)
                      ...+.++||+|++++|||+ ..++...+||| .|.++++.+|||...
T Consensus       139 ~~~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f  185 (211)
T PF01633_consen  139 SNSPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFF  185 (211)
T ss_dssp             SCGGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHH
T ss_pred             cCCCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHH
Confidence            2456899999999999999 55667899997 699999999999764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG4857 Predicted kinase [General function prediction only]

Probab=99.32  E-value=4.2e-11  Score=104.30  Aligned_cols=204  Identities=18%  Similarity=0.141  Sum_probs=121.0

Q ss_pred             cCCCcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           45 EGKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        45 ~~~~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      .|+...--.|+.++.|..|.+|.|+...+  ..|+|.+-+.          +...-..|+.+|..-.++.|..||+++..
T Consensus        26 ~G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~Rs~iE~~aL~rq~~~aPh~VPeIyf~  105 (408)
T COG4857          26 IGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFF  105 (408)
T ss_pred             hCCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchHHHHHHHHHHHhhccCCCCcceeEee
Confidence            35443446789999999999999987655  7888987431          12233457888877777778899999999


Q ss_pred             cccCCCceEEEEeeec-----------CCCCCCcHHHHHHHHHHHhhcCCCC--CCC-------CCCCCCcccccccCCC
Q 020393          113 GALPTGGSYIIMEFIE-----------FGSSRGNQSVFGKKLAEMHKAGKSS--KGF-------GFDVDNTIGSTPQINK  172 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~-----------G~~~~~~~~~lg~~La~lH~~~~~~--~~f-------g~~~~~~~~~~~~~~~  172 (326)
                      |   +....++||++.           |..++.....+|..|++---..+..  ..+       -|..+..+.-+ ..--
T Consensus       106 D---e~mavivMEdls~~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k~kK~~vk~FtNpELCDIt-E~LV  181 (408)
T COG4857         106 D---EIMAVIVMEDLSPHKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKADVKLFTNPELCDIT-ENLV  181 (408)
T ss_pred             c---chhhhhhHhhhhHHHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchHhHHHHHHHhCCchhhcch-hcee
Confidence            8   468999999975           4444566788888888733222210  000       01111111000 0000


Q ss_pred             CCccH-----HHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEE
Q 020393          173 WTSNW-----IEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL  247 (326)
Q Consensus       173 ~~~~w-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iI  247 (326)
                      +.+.+     ..+.. .++++..+....   +.+++-.+.++    ...+.  ....+|||||||.|.|++.+.+ +-+|
T Consensus       182 FtdPyfd~d~Nr~~~-~~l~~fVe~L~~---n~dlkvea~kL----k~~F~--~~aetLiHGDLHsGSIfvte~e-tkvI  250 (408)
T COG4857         182 FTDPYFDADRNRHTI-PQLDPFVEELRK---NRDLKVEAQKL----KHKFM--AYAETLIHGDLHSGSIFVTEKE-TKVI  250 (408)
T ss_pred             ecCcccccccccccc-ccchHHHHHHhc---CcchhhhHHHH----HHHHH--HHhHHHhccccccCcEEeecCc-ceee
Confidence            00000     00000 123333333221   11222222222    22232  2456999999999999997654 8899


Q ss_pred             cc-ccccCchhhhhhhh
Q 020393          248 DP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       248 D~-~~~~G~~~~Dla~~  263 (326)
                      |+ .++||+-.+|++++
T Consensus       251 DPEFaFYGPmafDiG~~  267 (408)
T COG4857         251 DPEFAFYGPMAFDIGML  267 (408)
T ss_pred             CccccccCcchhhHHHH
Confidence            96 69999999999975

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.27  E-value=9.2e-11  Score=100.12  Aligned_cols=155  Identities=16%  Similarity=0.189  Sum_probs=98.7

Q ss_pred             eCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           57 VGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.|..+.+|+....+.++++|......           ...+..|.++++.+... ++++|.++..+   .+..+++||
T Consensus         2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv~e   77 (199)
T TIGR03724         2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVD---PDNKTIVME   77 (199)
T ss_pred             CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEE---CCCCEEEEE
Confidence            4678889999998766789999854311           12345789999999875 68999998775   356799999


Q ss_pred             eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393          126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  205 (326)
Q Consensus       126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  205 (326)
                      +++|.++...       +   .. ..                        .   .+.                       
T Consensus        78 ~~~g~~l~~~-------~---~~-~~------------------------~---~~~-----------------------   96 (199)
T TIGR03724        78 YIEGKPLKDV-------I---EE-GN------------------------D---ELL-----------------------   96 (199)
T ss_pred             EECCccHHHH-------H---hh-cH------------------------H---HHH-----------------------
Confidence            9998754110       0   00 00                        0   000                       


Q ss_pred             HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh------hc----C----CCh
Q 020393          206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW------CA----G----FGG  270 (326)
Q Consensus       206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~------~~----~----~~~  270 (326)
                       .++...+..+     ...+++|||++|+||+++ ++...+||+ .+..+++..|.+.-.      ..    .    +-.
T Consensus        97 -~~i~~~l~~l-----H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (199)
T TIGR03724        97 -REIGRLVGKL-----HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKAVDLHVLKRSLESTHPDKAEELFE  169 (199)
T ss_pred             -HHHHHHHHHH-----HHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhhchHHHHHHHHhhhCchhHHHHHH
Confidence             0001111111     124789999999999998 666899998 467888888876321      11    1    113


Q ss_pred             HhHHHhhhhCCCC
Q 020393          271 SFYNSYFEVMPKQ  283 (326)
Q Consensus       271 ~fl~~Y~~~~~l~  283 (326)
                      .|+++|.+..+.+
T Consensus       170 ~fl~~Y~~~~~~~  182 (199)
T TIGR03724       170 AFLEGYREEFGEA  182 (199)
T ss_pred             HHHHHHHhhcccH
Confidence            6778888655443

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=99.25  E-value=4.8e-10  Score=100.15  Aligned_cols=198  Identities=16%  Similarity=0.143  Sum_probs=105.6

Q ss_pred             eEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee-cCCC
Q 020393           53 KICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI-EFGS  131 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l-~G~~  131 (326)
                      .+.++. |.+|.+|++.-++.+.++|.........+..+.           + +|+++..... +....++.++. .|..
T Consensus        10 ~~~~~~-g~t~~~~~~~~~g~~~~~~r~~~p~~~~~~~~~-----------~-~~~l~~~~~~-~~~~~~~~q~~~~~~~   75 (269)
T COG0510          10 KITPLN-GLTGYAFRIEGEGTRVFLKRNFEPFLPALIFRL-----------I-VPKLLWLKRI-ANGGVLVAQYWENGRT   75 (269)
T ss_pred             eeeecc-CCcceeEEeeCCCCeeeeecCCCcchHHHHHHh-----------h-hhhhhhhccc-ccCCceEEeeeccccc
Confidence            556665 788999999655557777765432211111111           1 1444433321 22333333433 3443


Q ss_pred             CC---CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHH
Q 020393          132 SR---GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR  208 (326)
Q Consensus       132 ~~---~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  208 (326)
                      ++   .....++..|+++|........+..           .......|..+..  .+.........  ....+.+.+.+
T Consensus        76 l~~~~~~~~~ia~~L~~lH~~~~~~~~~~~-----------~~~~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~~~~~  140 (269)
T COG0510          76 LTPEDMNLKKIAHILKKLHNSVPLLHQLPR-----------SGSSFIEPKDYLE--LLWQQNSRAYR--DNHLLRKKLKE  140 (269)
T ss_pred             cCccccchHHHHHHHHHhcCccchHHHHHh-----------hcchHhhHHHHHH--HHHhhchHHhh--hhHHHHHHHHH
Confidence            43   4467888899999995542111110           0000123332221  11111111110  11223344555


Q ss_pred             HHHHhcccccCCCCC-cceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhhh-cCCCh----HhHHHhhhhCC
Q 020393          209 LMKNLAPLFEGVNVE-PCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSWC-AGFGG----SFYNSYFEVMP  281 (326)
Q Consensus       209 l~~~~~~~l~~~~~~-~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~~-~~~~~----~fl~~Y~~~~~  281 (326)
                      +...+....    .+ .++||+|++++|+|.++.+...+||| .++.+||++|||.+.. ..+..    +.+..|.+..+
T Consensus       141 l~~~l~~~~----~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~~~~~~~~~~~~~~~~~~  216 (269)
T COG0510         141 LRRALEEVP----KDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDPAFDLAALLSEYIFNHNELEDLYSAYLEKYG  216 (269)
T ss_pred             HHHHhhhcC----CCceeeecCCCCccceEEcCCCcEEEEecccCCCccHHHHHHHHHHHhccchhHHHHHHHHHHHhCC
Confidence            554444332    23 79999999999999988667999997 6999999999998754 22322    35566665555


Q ss_pred             CC
Q 020393          282 KQ  283 (326)
Q Consensus       282 l~  283 (326)
                      ..
T Consensus       217 ~~  218 (269)
T COG0510         217 FE  218 (269)
T ss_pred             ch
Confidence            44

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.25  E-value=1.3e-10  Score=100.82  Aligned_cols=102  Identities=16%  Similarity=0.083  Sum_probs=71.5

Q ss_pred             cccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC---Ccch---------HHHHHHHHH
Q 020393           29 TFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSM---------FEGEALGLG   96 (326)
Q Consensus        29 ~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~---------~~~E~~~l~   96 (326)
                      ||.+=+.....+++.+. ++.+...++.+++|..+.||.++++.+++++|..++.   ....         ++.|+..+.
T Consensus        12 ~~~~~~~~~~~~~~~~~-l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~   90 (232)
T PRK10359         12 VFYKDNDNKYKEIFDDF-LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTD   90 (232)
T ss_pred             EEecCCcccHHHHHHHH-hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHH
Confidence            44333332234555555 4557778888899999999999887779999999742   1111         567888888


Q ss_pred             HHHhcCCCCCcceeeecccC-----CCceEEEEeeecCCCC
Q 020393           97 AMYETRTIRAPRPFKVGALP-----TGGSYIIMEFIEFGSS  132 (326)
Q Consensus        97 ~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~e~l~G~~~  132 (326)
                      .|.+. ++++|..+......     ++..+++|||++|.++
T Consensus        91 rL~~~-GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL  130 (232)
T PRK10359         91 RVRSE-GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVEL  130 (232)
T ss_pred             HHHHC-CCCcceEeeeecccccccccCCeEEEEEEECCccH
Confidence            88665 79999887554321     3578999999999754

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=99.19  E-value=2.5e-10  Score=100.32  Aligned_cols=175  Identities=15%  Similarity=0.113  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----CCcH---HHHHHHHHHHhhcCCCCC---CCCC
Q 020393           90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----RGNQ---SVFGKKLAEMHKAGKSSK---GFGF  158 (326)
Q Consensus        90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----~~~~---~~lg~~La~lH~~~~~~~---~fg~  158 (326)
                      .=+++-.+|... ++.||+++..|.   ...+++.|.+.-+..     ....   ...++.|+.+|..+.+..   ..|-
T Consensus        69 ~Fvai~~lL~~~-Gv~vPqIla~Dl---d~GfllLedLG~e~~l~~~g~~~~ery~~a~~ll~~~h~~~~~~q~~~~~g~  144 (351)
T COG3178          69 PFVAIAGLLAGQ-GVRVPQILAADL---DQGFLLLEDLGRETFLQALGEPIAERYAAADALLAAAHGALVPLQKAVREGS  144 (351)
T ss_pred             HHHHHHHHHhcC-CcCccHHhhhch---hcCchhHhhcCcHHHHHhcCCCchhHHHHHHHHHHHHhcCcchhhcccCCCC
Confidence            335566677765 799999999885   588999998853321     2333   367789999999887521   1110


Q ss_pred             CCCCcccccccCCCCCccHHHHHH-Hhhh--HHHHHHHHhhcCChHHHHHHHHHHHHhc-ccccCCCCCcceeecCCCCC
Q 020393          159 DVDNTIGSTPQINKWTSNWIEFYA-EHRL--GYQLKLALDQYGDSTIYQRGHRLMKNLA-PLFEGVNVEPCLLHGDLWSG  234 (326)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~w~~~~~-~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~LiHgDl~~~  234 (326)
                           .-.+|.-    +  ++... +..+  +.++........+...++.+++..+.+- .++   ..+.++||.|+|+.
T Consensus       145 -----~~~lp~f----D--r~am~~E~sLf~dWylpr~~g~~l~~~~r~~~~aiwd~Lid~~~---~~~~vlvhRDfh~~  210 (351)
T COG3178         145 -----THVLPPF----D--RAAMRREASLFVDWYLPRHLGRPLTDAERQAWEAIWDGLIDSLL---AQPKVLVHRDFHSR  210 (351)
T ss_pred             -----CCcCCcc----c--HHHHHHHHHhhHHhhhHHHhCCCCCHHHHHHHHHHHHHHHHHHh---cCCceeeeccccCc
Confidence                 0011110    0  00000 0001  1111111111123333455555555432 222   36889999999999


Q ss_pred             CeeecCC----CCeEEEcc-ccccCchhhhhhhhhh---cCCC----hHhHHHhhhhCCC
Q 020393          235 NISSDKN----GEPVILDP-ACYYGHNEAEFGMSWC---AGFG----GSFYNSYFEVMPK  282 (326)
Q Consensus       235 NiL~~~~----~~~~iID~-~~~~G~~~~Dla~~~~---~~~~----~~fl~~Y~~~~~l  282 (326)
                      |+|+..+    ..+||||| ++.+|+..||++.+..   -.++    .+++.+|.+.+..
T Consensus       211 NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DArvt~~pe~~~~~l~rY~~~r~~  270 (351)
T COG3178         211 NLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDARVTWSPERELALLDRYWAARRA  270 (351)
T ss_pred             cceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhccccCCHHHHHHHHHHHHHhhhh
Confidence            9999877    25899996 8999999999998732   2333    4789999988753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.19  E-value=2.2e-10  Score=94.57  Aligned_cols=153  Identities=18%  Similarity=0.173  Sum_probs=98.8

Q ss_pred             eCCccccceEEEEeCCccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           57 VGGGCINLASRYGTDAGSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +..|..+.+|+...-+.+.|+|.-.+.           .......|+.++..+... ++|+|.++..+.   +...++||
T Consensus         4 i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~---~~~~I~me   79 (204)
T COG3642           4 IKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDP---DNGLIVME   79 (204)
T ss_pred             hhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcC---CCCEEEEE
Confidence            456777777877665557888875431           123456899999999886 899999999884   58899999


Q ss_pred             eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393          126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  205 (326)
Q Consensus       126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  205 (326)
                      |++|..+.......          ..                           +..  ..+.                  
T Consensus        80 ~I~G~~lkd~l~~~----------~~---------------------------~~~--r~vG------------------  102 (204)
T COG3642          80 YIEGELLKDALEEA----------RP---------------------------DLL--REVG------------------  102 (204)
T ss_pred             EeCChhHHHHHHhc----------ch---------------------------HHH--HHHH------------------
Confidence            99997531110000          00                           000  0011                  


Q ss_pred             HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cccCchhhhhhh----hh--hc----C---CChH
Q 020393          206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGM----SW--CA----G---FGGS  271 (326)
Q Consensus       206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~~~~Dla~----~~--~~----~---~~~~  271 (326)
                        +.+..   +     ....+|||||.+.|+++..++ +.+|||. +.+.+-.-|.|+    +.  ..    .   +..+
T Consensus       103 --~~vg~---l-----H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~Vleral~sth~~~e~l~~~  171 (204)
T COG3642         103 --RLVGK---L-----HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHVLERALESTHEKAEELFAA  171 (204)
T ss_pred             --HHHHH---H-----HhcCeecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHHHHHHHHhccccHHHHHHH
Confidence              11111   1     234899999999999997665 8999984 567776666663    21  11    1   2258


Q ss_pred             hHHHhhhhCC
Q 020393          272 FYNSYFEVMP  281 (326)
Q Consensus       272 fl~~Y~~~~~  281 (326)
                      |++||.+...
T Consensus       172 f~~gY~~~~~  181 (204)
T COG3642         172 FLEGYREEFG  181 (204)
T ss_pred             HHHHHHHHhc
Confidence            9999977654

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.16  E-value=4.2e-10  Score=96.87  Aligned_cols=157  Identities=17%  Similarity=0.152  Sum_probs=99.8

Q ss_pred             eEeCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           55 CPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +.++.|..+.+|+....+..+++|......           ...+..|.+++..+... ++++|.++..+   .+..+++
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~lv   77 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVD---PENFIIV   77 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEe---CCCCEEE
Confidence            457888899999998777789999765321           12355788888888764 68999998765   3578999


Q ss_pred             EeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393          124 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  203 (326)
Q Consensus       124 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  203 (326)
                      |||++|.++...       +.   . ..                         + . .  ..+.                
T Consensus        78 ~e~~~G~~L~~~-------~~---~-~~-------------------------~-~-~--~~i~----------------  101 (211)
T PRK14879         78 MEYIEGEPLKDL-------IN---S-NG-------------------------M-E-E--LELS----------------  101 (211)
T ss_pred             EEEeCCcCHHHH-------HH---h-cc-------------------------H-H-H--HHHH----------------
Confidence            999999765211       10   0 00                         0 0 0  0000                


Q ss_pred             HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh---h-------cCC----
Q 020393          204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW---C-------AGF----  268 (326)
Q Consensus       204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~---~-------~~~----  268 (326)
                         ..+...+..+     ...+++|||++|+|||++ ++...+||| .+..+++..|.+.-.   +       ..+    
T Consensus       102 ---~~i~~~l~~l-----H~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (211)
T PRK14879        102 ---REIGRLVGKL-----HSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLEDRAVDLHVLLRSLESTHPDWAEEL  172 (211)
T ss_pred             ---HHHHHHHHHH-----HhCCcccCCCCcccEEEE-CCCEEEEECCcccCCCcHHhhhccHHHHHHHhhccCcchHHHH
Confidence               1111111111     124789999999999998 556899998 567888888876421   1       111    


Q ss_pred             ChHhHHHhhhhC
Q 020393          269 GGSFYNSYFEVM  280 (326)
Q Consensus       269 ~~~fl~~Y~~~~  280 (326)
                      -+.|+++|.+..
T Consensus       173 ~~~f~~gY~~~~  184 (211)
T PRK14879        173 FEAFLEGYREVM  184 (211)
T ss_pred             HHHHHHHHHHhh
Confidence            136788888755

>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]

Probab=99.13  E-value=6.7e-10  Score=97.51  Aligned_cols=200  Identities=15%  Similarity=0.159  Sum_probs=123.9

Q ss_pred             HHHHHHhcCCCc--ceeeEeEeCCccccceEEEEeCC---ccEEEEecCCCCcchH--HHHHHHHHHHHhcCCCCCccee
Q 020393           38 IREWILSEGKAT--HITKICPVGGGCINLASRYGTDA---GSFFVKTNRSIGPSMF--EGEALGLGAMYETRTIRAPRPF  110 (326)
Q Consensus        38 i~~~l~~~~~~~--~v~~v~~l~~G~~n~~y~v~~~~---~~~vlK~~~~~~~~~~--~~E~~~l~~L~~~~~~~vP~~~  110 (326)
                      +.++|++.-+.+  .-++.+..++|.+|..+....++   ..+.+|++...+.-.+  +.|+...+.|++++  -.|+++
T Consensus        68 a~eLlk~Lrp~W~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrvyg~~te~vIdre~Ev~afk~L~a~G--~ap~Ly  145 (391)
T KOG4720|consen   68 ALELLKKLRPHWKPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRVYGHNTELVIDRENEVIAFKLLAAYG--FAPKLY  145 (391)
T ss_pred             HHHHHHHhcccCCccceeeeeeccchhHHHHHhhcccccceeEEEEeccCCCceeeccHHHHHHHHHHHHcC--cChhhh
Confidence            445666654433  33556678899988776655443   3688898876433222  45666777888863  477787


Q ss_pred             eecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHH
Q 020393          111 KVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAE  183 (326)
Q Consensus       111 ~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~  183 (326)
                      ..-     .-.++++|++|..+.       +.++.+++.+|+||+....    |        ..|...-|. ....|+..
T Consensus       146 ~tF-----~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~----g--------~~pkp~lw~-km~~f~~l  207 (391)
T KOG4720|consen  146 GTF-----NNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVAT----G--------GNPKPPLWE-KMRKFLQL  207 (391)
T ss_pred             hee-----cCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccC----C--------CCCCCcHHH-HHHHHHHh
Confidence            653     347999999999873       5679999999999998873    1        112222221 11222210


Q ss_pred             hhhHHHH-HHHHhhc----CC-hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-CeEEEc-cccccCc
Q 020393          184 HRLGYQL-KLALDQY----GD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILD-PACYYGH  255 (326)
Q Consensus       184 ~~l~~~~-~~~~~~~----~~-~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-~~~iID-~~~~~G~  255 (326)
                        +.... ++..++.    .. ..+.+.+.++    .+.+..+..|.++||.||=.+||+.++.. ..-+|| +.+.+..
T Consensus       208 --v~~~f~de~~kq~~~~~~~~~~L~~Ei~~l----~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY  281 (391)
T KOG4720|consen  208 --VPTSFEDEINKQNLFDEPSPEDLGEEISKL----KEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNY  281 (391)
T ss_pred             --cCchhhcccchhhcccCCCHHHHHHHHHHH----HHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccch
Confidence              10000 0101111    11 1233333333    33333335788999999999999998764 467999 5799999


Q ss_pred             hhhhhhhh
Q 020393          256 NEAEFGMS  263 (326)
Q Consensus       256 ~~~Dla~~  263 (326)
                      .++||+--
T Consensus       282 ~afDIgNH  289 (391)
T KOG4720|consen  282 QAFDIGNH  289 (391)
T ss_pred             hheehhhh
Confidence            99999954

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.10  E-value=1.5e-09  Score=95.65  Aligned_cols=71  Identities=18%  Similarity=0.123  Sum_probs=53.3

Q ss_pred             CccccceEEEEeCCccEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC---Cc
Q 020393           59 GGCINLASRYGTDAGSFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GG  119 (326)
Q Consensus        59 ~G~~n~~y~v~~~~~~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~  119 (326)
                      .|..|++|+|.++++++|||.+...                .......|.+++..|... +++||+++.......   ..
T Consensus        42 ~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~~~~~~~  120 (239)
T PRK01723         42 AKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVRHGLFYR  120 (239)
T ss_pred             CCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeeecCccee
Confidence            5678999999999889999987421                113356799999999876 699999998643322   24


Q ss_pred             eEEEEeeecCC
Q 020393          120 SYIIMEFIEFG  130 (326)
Q Consensus       120 ~~~v~e~l~G~  130 (326)
                      .++|||+++|.
T Consensus       121 ~~lV~e~l~G~  131 (239)
T PRK01723        121 ADILIERIEGA  131 (239)
T ss_pred             eeEEEEecCCC
Confidence            46999999984

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.98  E-value=6e-09  Score=85.99  Aligned_cols=75  Identities=24%  Similarity=0.165  Sum_probs=58.6

Q ss_pred             eEeEeCCccccceEEEEeCCccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           53 KICPVGGGCINLASRYGTDAGSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      +++.+.+|....+++.......+++|.-++.           .+.....|+++|..+... ++++|+++..|.   ....
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~---~~~~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDT---YGGQ   86 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEec---CCCe
Confidence            6777888988888888777778888865431           134456799999888875 899999999884   5889


Q ss_pred             EEEeeecCCC
Q 020393          122 IIMEFIEFGS  131 (326)
Q Consensus       122 ~v~e~l~G~~  131 (326)
                      +.|||++|.+
T Consensus        87 i~ME~~~g~~   96 (229)
T KOG3087|consen   87 IYMEFIDGAS   96 (229)
T ss_pred             EEEEeccchh
Confidence            9999998843

>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase

Probab=98.95  E-value=3.4e-08  Score=95.58  Aligned_cols=194  Identities=15%  Similarity=0.162  Sum_probs=108.4

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CC---ceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TG---GSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~---~~~~v~e~l~  128 (326)
                      ++.+++.++|+...+   ++++|+|+++.-... ..=|.++.++|.+.+.-.||.+++.-...  ++   .-.++.+|++
T Consensus       170 ~r~l~~EQSNtSi~~---g~~~ilKlyRrl~~G-~nPe~E~~r~Lte~gf~~vP~llG~v~~~~~~g~~~tla~lq~fV~  245 (528)
T TIGR02457       170 VRLLSAEQSNSSLVV---GDRVVLKLYRKVEPG-INPEIEMGRYLTAAGYANIPPLLGSVERVGGDQAPHTLGLLQGYVQ  245 (528)
T ss_pred             eeecCCCcCceEEEE---CCEEEEEEecccCCC-CCcchHHHHHHHhCCCccCCcccEEEEEEcCCCCEEeeehHhhhhC
Confidence            455666677777776   357999999862211 12357778889886545799999874321  23   3456668888


Q ss_pred             CCCC---------C-------------------------CcHHHHHHHHHHHhhcCCCC---CCCCCCCCCcccccccCC
Q 020393          129 FGSS---------R-------------------------GNQSVFGKKLAEMHKAGKSS---KGFGFDVDNTIGSTPQIN  171 (326)
Q Consensus       129 G~~~---------~-------------------------~~~~~lg~~La~lH~~~~~~---~~fg~~~~~~~~~~~~~~  171 (326)
                      +...         .                         ..++.+|+.+|.||......   +.|+-.        |...
T Consensus       246 nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~aLA~~~~~~aF~pe--------p~~~  317 (528)
T TIGR02457       246 NQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLALAAGGEDPAFAPE--------PIST  317 (528)
T ss_pred             CCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC--------CCCH
Confidence            6531         0                         11577999999999988743   123210        1111


Q ss_pred             CCCccHHHHHHHhhhHHHHHHHHhh--cCChHHHHHH-------HHHHHHhcccccCCCCCcce---eecCCCCCCeeec
Q 020393          172 KWTSNWIEFYAEHRLGYQLKLALDQ--YGDSTIYQRG-------HRLMKNLAPLFEGVNVEPCL---LHGDLWSGNISSD  239 (326)
Q Consensus       172 ~~~~~w~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~-------~~l~~~~~~~l~~~~~~~~L---iHgDl~~~NiL~~  239 (326)
                      .....|.+... .++...++...+.  ..++...+..       +++.+.+..+..  ....++   ||||+|.||+|+.
T Consensus       318 ~~~~~~~~~~~-~~~~~a~~~L~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~--~~~~~~k~RiHGD~HLgqvL~t  394 (528)
T TIGR02457       318 LYQRSWYQDMR-AQAERALQLLAQSRDGLPAAARALADRLLAQRKELAAHLRPLVK--REIDGLKIRIHGDFHLGQVLVV  394 (528)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcceEeEecCcchhcEEEe
Confidence            11123322221 1222222222111  1122222222       223333333332  233456   9999999999998


Q ss_pred             CCCCeEEEccc--c--------ccCchhhhhh-hh
Q 020393          240 KNGEPVILDPA--C--------YYGHNEAEFG-MS  263 (326)
Q Consensus       240 ~~~~~~iID~~--~--------~~G~~~~Dla-~~  263 (326)
                      +++ ..||||+  .        ....|..|+| |+
T Consensus       395 ~~d-~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGML  428 (528)
T TIGR02457       395 QDD-AVLIDFEGEPARPLAERRAKRSPLRDVAGML  428 (528)
T ss_pred             CCC-eEEEcCCCCCCCChHHhccCCChHHHHHHHH
Confidence            776 6699963  2        2567889998 44

Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=98.93  E-value=2.6e-09  Score=91.22  Aligned_cols=58  Identities=22%  Similarity=0.379  Sum_probs=44.1

Q ss_pred             CCcceeecCCCCCCeeecCCC-----CeEEEcc-ccccCchhhhhhhhhhcCC--------ChHhHHHhhhh
Q 020393          222 VEPCLLHGDLWSGNISSDKNG-----EPVILDP-ACYYGHNEAEFGMSWCAGF--------GGSFYNSYFEV  279 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~-----~~~iID~-~~~~G~~~~Dla~~~~~~~--------~~~fl~~Y~~~  279 (326)
                      ...+|||||+|++|+++..++     ..++||| .+.+|+|.+||+.+.+...        .+.+++.|.+.
T Consensus       118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~~~~~r~~~~~~ll~~Y~~~  189 (196)
T smart00587      118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSLSVEIRREHFDELLKFYYET  189 (196)
T ss_pred             CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            467999999999999998543     4689997 6899999999997632211        24677777653

subfamily of choline kinases

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.91  E-value=7.1e-09  Score=101.97  Aligned_cols=162  Identities=16%  Similarity=0.148  Sum_probs=101.0

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCC-----C------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRS-----I------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-----~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.++.|.+..||+....+...++|....     .      ....+..|.++++.+... ++++|.++..+   ....++
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~---~~~~~l  413 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVD---PEEKTI  413 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEe---CCCCEE
Confidence            46688999999999877666656554321     0      013356799999988765 57777776655   356799


Q ss_pred             EEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHH
Q 020393          123 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI  202 (326)
Q Consensus       123 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~  202 (326)
                      +|||++|.++.....             ..                      .   . +.                    
T Consensus       414 v~E~~~g~~L~~~l~-------------~~----------------------~---~-~~--------------------  434 (535)
T PRK09605        414 VMEYIGGKDLKDVLE-------------GN----------------------P---E-LV--------------------  434 (535)
T ss_pred             EEEecCCCcHHHHHH-------------HH----------------------H---H-HH--------------------
Confidence            999999976522111             00                      0   0 00                    


Q ss_pred             HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh------hcC-------C
Q 020393          203 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW------CAG-------F  268 (326)
Q Consensus       203 ~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~------~~~-------~  268 (326)
                          .++.+.+..+     ....+||+|++|+|||++ ++...|||| .+..+++..|++...      +.+       .
T Consensus       435 ----~~i~~~L~~l-----H~~giiHrDlkp~NILl~-~~~~~liDFGla~~~~~~~d~a~~l~~~~~~~~~~~~~~~~~  504 (535)
T PRK09605        435 ----RKVGEIVAKL-----HKAGIVHGDLTTSNFIVR-DDRLYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTHYDFEEL  504 (535)
T ss_pred             ----HHHHHHHHHH-----HhCCCccCCCChHHEEEE-CCcEEEEeCcccccCCchHhhhhhHHHHHHHhcCCCCCHHHH
Confidence                0001111111     124799999999999994 556889998 578899999987531      111       1


Q ss_pred             ChHhHHHhhhhCCCCcCHHHH
Q 020393          269 GGSFYNSYFEVMPKQPGFEKR  289 (326)
Q Consensus       269 ~~~fl~~Y~~~~~l~~~~~~r  289 (326)
                      .+.|+++|... +..+++.++
T Consensus       505 ~~~fl~gY~~~-~~~~~~~~~  524 (535)
T PRK09605        505 WEAFLEGYRET-EGAEDVLER  524 (535)
T ss_pred             HHHHHHhhccC-ccHHHHHHH
Confidence            24789999766 444444443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.90  E-value=1.5e-08  Score=96.98  Aligned_cols=100  Identities=17%  Similarity=0.099  Sum_probs=68.1

Q ss_pred             cCCCchhHHHHHHhcCCCcce------eeEeEeCCccccceEEEEeCCc-cEEEEecCCCCcch----------------
Q 020393           31 ATLSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSM----------------   87 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~~~~~~v------~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~----------------   87 (326)
                      .|++++++++.+.+. +|..+      .+-+|++.|..++||+-+..+| ++++|+.++.-...                
T Consensus        94 ~p~~~~~~~~~l~~e-lg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~  172 (437)
T TIGR01982        94 PPFDFKVARKVIEAA-LGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVE  172 (437)
T ss_pred             CCCCHHHHHHHHHHH-hCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHH
Confidence            467889999999876 33222      2336799999999999998766 79999986532111                


Q ss_pred             ---------------------------HHHHHHHHHHHHh----cCCCCCcceeeecccCCCceEEEEeeecCCCCCC
Q 020393           88 ---------------------------FEGEALGLGAMYE----TRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRG  134 (326)
Q Consensus        88 ---------------------------~~~E~~~l~~L~~----~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~  134 (326)
                                                 +..|++.+..+++    ...+.+|+++...   .+..+++|||++|.++..
T Consensus       173 ~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~vLvmE~i~G~~L~~  247 (437)
T TIGR01982       173 RLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDR---TSERVLTMEWIDGIPLSD  247 (437)
T ss_pred             HhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh---cCCceEEEEeECCccccc
Confidence                                       2234444444432    2357889988644   357899999999987743

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.89  E-value=8.4e-09  Score=90.21  Aligned_cols=136  Identities=21%  Similarity=0.227  Sum_probs=93.9

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCCcc
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPR  108 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~~~vP~  108 (326)
                      .++|-|=.+.+|...+++| ++++|+.+..                         ++...+.|.++|+.|... |++||+
T Consensus        97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~  175 (304)
T COG0478          97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK  175 (304)
T ss_pred             cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence            5677888999999988755 8999987531                         112246799999999986 799999


Q ss_pred             eeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHH
Q 020393          109 PFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGY  188 (326)
Q Consensus       109 ~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~  188 (326)
                      |+.+.     .++++||+++|.++...-         +   ..                       .+         .. 
T Consensus       176 P~~~n-----RHaVvMe~ieG~eL~~~r---------~---~~-----------------------en---------~~-  205 (304)
T COG0478         176 PIAWN-----RHAVVMEYIEGVELYRLR---------L---DV-----------------------EN---------PD-  205 (304)
T ss_pred             ccccc-----cceeeeehcccceeeccc---------C---cc-----------------------cC---------HH-
Confidence            99775     789999999997652100         0   00                       00         00 


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-c-cccCchhhhhh
Q 020393          189 QLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-A-CYYGHNEAEFG  261 (326)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~-~~~G~~~~Dla  261 (326)
                                     +.++.+++.+....     ..++|||||..-||++++||...+||| . ...+||-++.-
T Consensus       206 ---------------~il~~il~~~~~~~-----~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~  260 (304)
T COG0478         206 ---------------EILDKILEEVRKAY-----RRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL  260 (304)
T ss_pred             ---------------HHHHHHHHHHHHHH-----HcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHH
Confidence                           11112222222211     358999999999999999988999995 5 46888876644

>PRK09902 hypothetical protein; Provisional

Probab=98.87  E-value=6.3e-08  Score=82.58  Aligned_cols=179  Identities=11%  Similarity=0.072  Sum_probs=108.0

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeC--CccccceEEEEeCCccEEEEecCC---------CCcchHHHHHHHHHHHHhcCCC
Q 020393           36 DPIREWILSEGKATHITKICPVG--GGCINLASRYGTDAGSFFVKTNRS---------IGPSMFEGEALGLGAMYETRTI  104 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~--~G~~n~~y~v~~~~~~~vlK~~~~---------~~~~~~~~E~~~l~~L~~~~~~  104 (326)
                      +++..|-+..     ..=|++..  .|..+.|++++..+..|++|....         -.+..+..|...|+.|.+. ++
T Consensus         8 ~~f~~~w~~~-----~~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~-Gv   81 (216)
T PRK09902          8 DEFNHWWATE-----GDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERA-GV   81 (216)
T ss_pred             hhHHHHHhCC-----CceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHc-CC
Confidence            4555555443     22233443  367899999998777899998762         2345688999999999997 79


Q ss_pred             CCcceeeecccCC---CceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHH
Q 020393          105 RAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY  181 (326)
Q Consensus       105 ~vP~~~~~~~~~~---~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~  181 (326)
                      |||+|+..+..+.   -..++|++.++|-..          |..+-....    ..              .+...    .
T Consensus        82 PVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~----------L~~~l~~~~----~~--------------~~~~~----~  129 (216)
T PRK09902         82 IVPKIVFGEAVKIEGEWRALLVTEDMAGFIS----------IADWYAQHA----VS--------------PYSDE----V  129 (216)
T ss_pred             CCCccceeeeeccCCceEEEEEEEeCCCCcc----------HHHHHhcCC----cC--------------CcchH----H
Confidence            9999996654321   257889999988533          222211110    00              00000    0


Q ss_pred             HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCC--eEEEccc-cc-----c
Q 020393          182 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE--PVILDPA-CY-----Y  253 (326)
Q Consensus       182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~--~~iID~~-~~-----~  253 (326)
                       .                   ...+.++.+.+..+     ...+++|||+.+.||+++.++.  ..+||++ +.     .
T Consensus       130 -k-------------------~~il~~va~~ia~L-----H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l~~~  184 (216)
T PRK09902        130 -R-------------------QAMLKAVALAFKKM-----HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRD  184 (216)
T ss_pred             -H-------------------HHHHHHHHHHHHHH-----HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhhhhh
Confidence             0                   01122222222222     2458999999999999986666  7899953 32     3


Q ss_pred             Cchhhhhhhhh-h-cCCCh----HhHHHhh
Q 020393          254 GHNEAEFGMSW-C-AGFGG----SFYNSYF  277 (326)
Q Consensus       254 G~~~~Dla~~~-~-~~~~~----~fl~~Y~  277 (326)
                      ....-||..+. . .++++    .|+.+|-
T Consensus       185 ~~~~~Dl~~l~r~~~~~s~~~~~~~~~~y~  214 (216)
T PRK09902        185 KAINHDFRQLEKYLEPIPKADWEQVKAYYY  214 (216)
T ss_pred             hhhHhHHHHHHHhccCCCHHHHHHHHHHHh
Confidence            44466877664 2 44653    4677774

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.84  E-value=6.2e-08  Score=86.53  Aligned_cols=65  Identities=22%  Similarity=0.212  Sum_probs=49.0

Q ss_pred             eEEEEeCCccEEEEecCCCC------------c--chHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEEEEee
Q 020393           65 ASRYGTDAGSFFVKTNRSIG------------P--SMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEF  126 (326)
Q Consensus        65 ~y~v~~~~~~~vlK~~~~~~------------~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~e~  126 (326)
                      |++++.++..|++|.+....            .  .....|...+..|.+. ++|||+|+..+...    ....++|+|+
T Consensus        38 vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~~~~~s~LVte~  116 (268)
T PRK15123         38 TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNPATRTSFIITED  116 (268)
T ss_pred             EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCCccceeEEEEee
Confidence            67888877789999774321            0  1256899999999987 79999998876432    2358999999


Q ss_pred             ecCC
Q 020393          127 IEFG  130 (326)
Q Consensus       127 l~G~  130 (326)
                      ++|.
T Consensus       117 l~~~  120 (268)
T PRK15123        117 LAPT  120 (268)
T ss_pred             CCCC
Confidence            9985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.76  E-value=1.3e-07  Score=80.20  Aligned_cols=71  Identities=23%  Similarity=0.260  Sum_probs=52.1

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCCCc-----------------------------chHHHHHHHHHHHHhcCCC
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIGP-----------------------------SMFEGEALGLGAMYETRTI  104 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~-----------------------------~~~~~E~~~l~~L~~~~~~  104 (326)
                      .+++.|....||+....+| .+++|+.+....                             ...+.|.+.+..+... ++
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i   81 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV   81 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence            4678899999999987544 788998764210                             0124678888888765 68


Q ss_pred             CCcceeeecccCCCceEEEEeeecCCC
Q 020393          105 RAPRPFKVGALPTGGSYIIMEFIEFGS  131 (326)
Q Consensus       105 ~vP~~~~~~~~~~~~~~~v~e~l~G~~  131 (326)
                      ++|.++...     ..+++|||++|..
T Consensus        82 ~~p~~~~~~-----~~~lVmE~~~g~~  103 (190)
T cd05145          82 PVPEPILLK-----KNVLVMEFIGDDG  103 (190)
T ss_pred             CCceEEEec-----CCEEEEEEecCCC
Confidence            889988654     3489999999863

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.68  E-value=1.5e-07  Score=79.87  Aligned_cols=71  Identities=20%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             EeCCccccceEEEEeCCc-cEEEEecCCCC---c---------ch-----------------HHHHHHHHHHHHhcCCCC
Q 020393           56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---P---------SM-----------------FEGEALGLGAMYETRTIR  105 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~---------~~-----------------~~~E~~~l~~L~~~~~~~  105 (326)
                      .++.|....||+....+| .+++|+.+...   .         ..                 ...|.+.+..|... +++
T Consensus         4 ~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v~   82 (190)
T cd05147           4 CISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GIP   82 (190)
T ss_pred             ccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CCC
Confidence            477889999999987655 78999875321   0         11                 12488899999765 577


Q ss_pred             CcceeeecccCCCceEEEEeeecCCCC
Q 020393          106 APRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       106 vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +|.++...     ..+++|||++|..+
T Consensus        83 ~p~~~~~~-----~~~iVmE~i~g~~l  104 (190)
T cd05147          83 CPEPILLK-----SHVLVMEFIGDDGW  104 (190)
T ss_pred             CCcEEEec-----CCEEEEEEeCCCCC
Confidence            88877543     34999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.66  E-value=6.9e-08  Score=81.57  Aligned_cols=39  Identities=26%  Similarity=0.431  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec--CCCC
Q 020393           88 FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE--FGSS  132 (326)
Q Consensus        88 ~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~--G~~~  132 (326)
                      .++|.+.|..+.+. +++||+|+...     ..+++|||++  |.++
T Consensus        55 ~~~E~~~L~~l~~~-Gv~vP~p~~~~-----~~~ivME~I~~~G~~~   95 (188)
T PF01163_consen   55 AKKEFRNLKRLYEA-GVPVPKPYDYN-----RNVIVMEYIGEDGVPL   95 (188)
T ss_dssp             HHHHHHHHHHCCCT-T-SS--EEEEE-----TTEEEEE--EETTEEG
T ss_pred             HHHHHHHHHHHHHC-CccCCcEEEEe-----CCEEEEEecCCCccch
Confidence            45799999988876 79999999775     5699999999  6543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.65  E-value=3e-07  Score=78.11  Aligned_cols=36  Identities=22%  Similarity=0.268  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393           90 GEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  131 (326)
Q Consensus        90 ~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~  131 (326)
                      +|.+.|+.+.+. ++|||+|+...     ..+++||++.|..
T Consensus        75 kE~r~L~rl~~~-Gv~vP~pi~~~-----~~~lvME~Ig~~~  110 (197)
T cd05146          75 KEMHNLKRMQKA-GIPCPEVVVLK-----KHVLVMSFIGDDQ  110 (197)
T ss_pred             HHHHHHHHHHHc-CCCCCeEEEec-----CCEEEEEEcCCCC
Confidence            899999999987 79999999764     6799999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.65  E-value=8e-07  Score=76.22  Aligned_cols=102  Identities=14%  Similarity=0.055  Sum_probs=59.4

Q ss_pred             cccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCc------------chHHHHHHHHH
Q 020393           29 TFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP------------SMFEGEALGLG   96 (326)
Q Consensus        29 ~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~------------~~~~~E~~~l~   96 (326)
                      ||..=+.+...+++.+. ...+...++-+.+..-|.|.+|+++++.||+|.+++..+            .....+...+.
T Consensus        12 vy~~e~~~~y~~l~~~i-~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~   90 (229)
T PF06176_consen   12 VYYKENDEKYLELGEKI-LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTD   90 (229)
T ss_pred             EEEecCchHHHHHHHHH-HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHH
Confidence            34333334555556555 333455555566667889999999999999999976321            11122333334


Q ss_pred             HHHhcCCCCCccee-eecccC----CCceEEEEeeecCCCC
Q 020393           97 AMYETRTIRAPRPF-KVGALP----TGGSYIIMEFIEFGSS  132 (326)
Q Consensus        97 ~L~~~~~~~vP~~~-~~~~~~----~~~~~~v~e~l~G~~~  132 (326)
                      .+.+. ++..|..+ ....-.    ....+++|||++|.++
T Consensus        91 ~i~~~-g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l  130 (229)
T PF06176_consen   91 KIRNE-GFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVEL  130 (229)
T ss_pred             HHHHc-CccccccceeeeeeeeccceeEEEEEEEEecCeec
Confidence            44443 45444432 221111    2456789999999876

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.64  E-value=2.7e-07  Score=89.86  Aligned_cols=99  Identities=15%  Similarity=0.065  Sum_probs=68.1

Q ss_pred             cCCCchhHHHHHHhc-CCCc-ce---eeEeEeCCccccceEEEEeCC-c-cEEEEecCCCCc------------------
Q 020393           31 ATLSDDPIREWILSE-GKAT-HI---TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIGP------------------   85 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~-~~~~-~v---~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~~------------------   85 (326)
                      .|++.+++++.+.+. |... ++   .+.+|++.|...+||+.+..+ | ++++|+-++.-.                  
T Consensus        96 pp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~  175 (537)
T PRK04750         96 PPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVE  175 (537)
T ss_pred             CCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHH
Confidence            367788999999876 3211 11   244789999999999998865 5 799998864210                  


Q ss_pred             -------------------------chHHHHHHHHHHHHhc----CCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           86 -------------------------SMFEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        86 -------------------------~~~~~E~~~l~~L~~~----~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                                               -.+..|++.+..+++.    ..+.||+++..-   .+..+++|||++|.++
T Consensus       176 ~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~---st~~VLvmE~i~G~~l  248 (537)
T PRK04750        176 RLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY---CSETVMVMERMYGIPV  248 (537)
T ss_pred             HhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc---CCCceEEEeeecCccH
Confidence                                     0133455555555432    347899999754   3588999999999876

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.61  E-value=5.6e-07  Score=76.80  Aligned_cols=73  Identities=21%  Similarity=0.163  Sum_probs=51.9

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCCCC-------------------------cchHHHHHHHHHHHHhcCCCCCc
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-------------------------PSMFEGEALGLGAMYETRTIRAP  107 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~-------------------------~~~~~~E~~~l~~L~~~~~~~vP  107 (326)
                      .++++.|....+|+....++ .+++|..+...                         ......|..++..+... ++++|
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~   98 (198)
T cd05144          20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP   98 (198)
T ss_pred             CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence            35688899999999987554 78889754210                         01245677788888664 47889


Q ss_pred             ceeeecccCCCceEEEEeeecCCCC
Q 020393          108 RPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       108 ~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .++..     +..+++|||++|.++
T Consensus        99 ~~~~~-----~~~~lv~e~~~g~~L  118 (198)
T cd05144          99 KPIDW-----NRHAVVMEYIDGVEL  118 (198)
T ss_pred             ceeec-----CCceEEEEEeCCcch
Confidence            88854     356999999999654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.61  E-value=2.5e-07  Score=89.43  Aligned_cols=97  Identities=20%  Similarity=0.160  Sum_probs=69.5

Q ss_pred             CCCchhHHHHHHhcCCCcce------eeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--------------------
Q 020393           32 TLSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--------------------   84 (326)
Q Consensus        32 ~~~~~~i~~~l~~~~~~~~v------~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--------------------   84 (326)
                      |.+.+++.+.+.+. +|.++      .+-+|++.+...+||+-+..+| .++||+.++.-                    
T Consensus       103 p~~~~~~~~iie~e-LG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~  181 (517)
T COG0661         103 PFPFEEAERIIEEE-LGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKR  181 (517)
T ss_pred             CCCHHHHHHHHHHH-hCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHH
Confidence            56778889888877 44222      2446788888999999999866 79999987630                    


Q ss_pred             --c---------------------chHHHHHHHHHHHHhc----CCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           85 --P---------------------SMFEGEALGLGAMYET----RTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        85 --~---------------------~~~~~E~~~l~~L~~~----~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                        +                     -.+..|+..++.++++    ..+.||+|++.-   .+...++|||++|.+.
T Consensus       182 ~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~---t~~~VLtmE~i~Gi~i  253 (517)
T COG0661         182 LPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEY---TTRRVLTMEWIDGIKI  253 (517)
T ss_pred             cCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhc---cCCcEEEEEeeCCEec
Confidence              0                     0023566666666543    457899999755   3688999999999876

>smart00090 RIO RIO-like kinase

Probab=98.59  E-value=7.5e-07  Score=78.35  Aligned_cols=88  Identities=20%  Similarity=0.161  Sum_probs=60.9

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeCCccccceEEEE--eCCc-cEEEEecCCCCc---------------------------
Q 020393           36 DPIREWILSEGKATHITKICPVGGGCINLASRYG--TDAG-SFFVKTNRSIGP---------------------------   85 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~--~~~~-~~vlK~~~~~~~---------------------------   85 (326)
                      .++..++++ |...++.  ++++.|....+|+..  ..+| .+++|+.+....                           
T Consensus        18 ~~~~~~~~~-~~~~~i~--~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (237)
T smart00090       18 LALYSLLNR-GILSAIG--GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVR   94 (237)
T ss_pred             HHHHHHHhc-CchHHhC--CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHH
Confidence            445555543 3333444  468889999999997  3344 788998753210                           


Q ss_pred             chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           86 SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        86 ~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ..++.|.+.+..+... ++.+|+++...     ..++|||+++|..+
T Consensus        95 ~~~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~~lV~E~~~g~~L  135 (237)
T smart00090       95 LWAEKEFRNLQRLYEA-GVPVPKPIAWR-----RNVLVMEFIGGDGL  135 (237)
T ss_pred             HHHHHHHHHHHHHHhc-CCCCCeeeEec-----CceEEEEEecCCcc
Confidence            1245799999999764 68899998653     45899999999765

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.58  E-value=3.1e-07  Score=79.07  Aligned_cols=44  Identities=27%  Similarity=0.264  Sum_probs=35.2

Q ss_pred             chHHHHHHHHHHHHhcCCCCCcceeeecccCC---CceEEEEeeecCC
Q 020393           86 SMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFG  130 (326)
Q Consensus        86 ~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~~~~v~e~l~G~  130 (326)
                      .....|...+..|.+. ++|||+|+..+....   ...++|+|+++|.
T Consensus        56 ~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~~~  102 (206)
T PF06293_consen   56 SRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALPGA  102 (206)
T ss_pred             hHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCCCc
Confidence            4467899999999986 799999999876532   2568999999984

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]

Probab=98.57  E-value=6.4e-07  Score=81.46  Aligned_cols=184  Identities=20%  Similarity=0.084  Sum_probs=112.4

Q ss_pred             eeeEeEeCCccccceEEEEeCCc---------cEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           51 ITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~---------~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ..+++.+++|..|.+|.++.+..         ++.+|++.... ......|..++..|+++  ---|++++.-..     
T Consensus        42 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~~~~~~~Esv~fa~lSer--~lGPkL~G~F~~-----  114 (366)
T KOG2686|consen   42 EQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVDFSQRETESVMFAILSER--GLGPKLYGFFSG-----  114 (366)
T ss_pred             hheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCccHHHhhhHHHHHHHHhhc--CCCcceeeecCC-----
Confidence            45788889999999999886432         58999997632 23456788888999887  357888876431     


Q ss_pred             EEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHH
Q 020393          121 YIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLA  193 (326)
Q Consensus       121 ~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~  193 (326)
                      .-+-+|++-+.+.       .....+|..++++|....+.+.              ...  ..|.      ++..++..+
T Consensus       115 GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~k--------------e~~--~~~~------~~~~wl~~~  172 (366)
T KOG2686|consen  115 GRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPK--------------EPR--SLWE------RYKKWLKGA  172 (366)
T ss_pred             ccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCc--------------cHH--HHHH------HHHHHHhhh
Confidence            2234566655442       4568999999999998874110              000  1121      122222222


Q ss_pred             Hhh---------cCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-CeEEEcc-ccccCchhhhhhh
Q 020393          194 LDQ---------YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-EPVILDP-ACYYGHNEAEFGM  262 (326)
Q Consensus       194 ~~~---------~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-~~~iID~-~~~~G~~~~Dla~  262 (326)
                      ...         ..+.-........+...+++.+....+.++||.|+..||||...+. ...+||+ .+.+.+..+|||.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlan  252 (366)
T KOG2686|consen  173 KKIKPTEVSYSCGPDKLEIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLAN  252 (366)
T ss_pred             hhcCCCccchhcccchhhHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHH
Confidence            110         0000000111111111222221113568999999999999998554 4789996 7999999999996


Q ss_pred             h
Q 020393          263 S  263 (326)
Q Consensus       263 ~  263 (326)
                      -
T Consensus       253 H  253 (366)
T KOG2686|consen  253 H  253 (366)
T ss_pred             H
Confidence            4

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.57  E-value=7.3e-07  Score=76.24  Aligned_cols=72  Identities=14%  Similarity=0.077  Sum_probs=52.4

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCC-------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.+..|..+.+|.+..++.+++.|-.....       ...++.|+++|+.|...  ..+|+++..+     ..+++|+|
T Consensus         7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~--~~vP~ll~~~-----~~~lvmey   79 (218)
T PRK12274          7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL--PRTPRLLHWD-----GRHLDRSY   79 (218)
T ss_pred             ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC--CCCCEEEEEc-----CEEEEEee
Confidence            4556778889999888777788855443321       12567899999998653  4589998763     56999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus        80 I~G~~L   85 (218)
T PRK12274         80 LAGAAM   85 (218)
T ss_pred             ecCccH
Confidence            998754

>PRK14705 glycogen branching enzyme; Provisional

Probab=98.47  E-value=7.1e-06  Score=86.27  Aligned_cols=249  Identities=16%  Similarity=0.074  Sum_probs=136.0

Q ss_pred             eEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--------CCC-------c
Q 020393           55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--------PTG-------G  119 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--------~~~-------~  119 (326)
                      +.+++-++|+...+...+.++|+|+++.-... ..=|.++.++|.+.+.-.||.+++.-..        .++       .
T Consensus       150 r~l~~EQSNTSvi~gd~~~~~ilKlfRrl~~G-~NPdvE~~r~Lteag~~~vP~llG~ve~~~~~~~~~~~~~~~~~~~t  228 (1224)
T PRK14705        150 KVLSGEQSNTSVIVDDGDSAAIVKFFRVLSAG-KNPEVELGAALTAAGTSEVPATLGWVTGEWDGPASNAGATARAVTGE  228 (1224)
T ss_pred             cccccccCceEEEECCCCccEEEEEeeecCCC-CCccHHHHHHHhhCCCccCCCccEEEEEeecccccccCCccccCcee
Confidence            34555577777776432348999999853211 1235777888988655579999987322        111       2


Q ss_pred             eEEEEeeecCCCC---------------CCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCC-CccHHHHHHH
Q 020393          120 SYIIMEFIEFGSS---------------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKW-TSNWIEFYAE  183 (326)
Q Consensus       120 ~~~v~e~l~G~~~---------------~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~-~~~w~~~~~~  183 (326)
                      -.++.+|+++...               ...++.+|+.+|.||...+..  ++-  +......    .. .+.|.     
T Consensus       229 La~lq~fv~n~gDgW~~tl~~l~r~~~f~~~a~~LG~rtAemH~aLA~~--~~~--~~f~~~~----~~~~~~~~-----  295 (1224)
T PRK14705        229 LAVAHEFLAGGLDAWRLAVDAAASGKDFTAEARALGAATATVHRRLAET--LGT--HDGQEQG----PDIAAGVA-----  295 (1224)
T ss_pred             HHHHHHhhcCCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC--CCC--cccccCH----HHHHHHHH-----
Confidence            3667788887542               023688999999999988743  110  1000000    00 01111     


Q ss_pred             hhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCC-----CeEEEccc--c-----
Q 020393          184 HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNG-----EPVILDPA--C-----  251 (326)
Q Consensus       184 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~-----~~~iID~~--~-----  251 (326)
                      +++...+    .. ..+.+...-+.+.+.+..+.........=||||||.|.||+.++.     .-.||||+  .     
T Consensus       296 ~rL~~~~----~~-~~~~~~~~~~~l~~~~~~l~~~~~~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~  370 (1224)
T PRK14705        296 RRVRGSW----AE-AGPAVGPYDHALDELLSALDGRNAGQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPID  370 (1224)
T ss_pred             HHHHHHH----hh-CCHHHHHHHHHHHHHHHHHhccCccceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChh
Confidence            1222111    11 122222222333333333222112355779999999999997442     26799963  2     


Q ss_pred             ---ccCchhhhhh-hhh---hc------C---------C----ChHhHHHhhhhCC-CCcCHHHHHHHHHHHHHHHHH--
Q 020393          252 ---YYGHNEAEFG-MSW---CA------G---------F----GGSFYNSYFEVMP-KQPGFEKRRDLYMLYHYLNHY--  302 (326)
Q Consensus       252 ---~~G~~~~Dla-~~~---~~------~---------~----~~~fl~~Y~~~~~-l~~~~~~r~~~y~l~~~l~~~--  302 (326)
                         ....|..|+| |+.   +.      .         |    ..+|+++|.+..+ ..+.....+.+|.|=.++-..  
T Consensus       371 ERR~k~sPLRDVAGMLRSFdYAa~~~l~~~~~~~~a~~W~~~~~~aFL~gY~~~~~g~~~~~~~LL~aflLeKAvYEv~Y  450 (1224)
T PRK14705        371 ERNSPDVPLRDVTGMLRSFDYAAGAATRENEGAHVPESWVDDCAAAFLAGYSEVTPGTIDRRSPLFVALWLDKALYEVVY  450 (1224)
T ss_pred             hhccCCChHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHH
Confidence               2567899998 442   11      0         1    1469999998753 333322334445443333222  


Q ss_pred             -HHhccCcHHHHHHHHHHHHH
Q 020393          303 -NLFGSGYRSSALSIIDDYLR  322 (326)
Q Consensus       303 -~~~~~~~~~~~~~~~~~~~~  322 (326)
                       ....+.|...-.+.+.+++.
T Consensus       451 E~~nRP~Wv~IPL~gi~rll~  471 (1224)
T PRK14705        451 ELRNRPDWLSIPVNASRRLLD  471 (1224)
T ss_pred             HHHcCCcchHhHHHHHHHHHh
Confidence             23357888877777777664

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.43  E-value=3.3e-06  Score=71.10  Aligned_cols=71  Identities=24%  Similarity=0.280  Sum_probs=50.3

Q ss_pred             eEeCCccccceEEEEeC-CccEEEEecCCCC-----cc-h---------------------HHHHHHHHHHHHhcCCCCC
Q 020393           55 CPVGGGCINLASRYGTD-AGSFFVKTNRSIG-----PS-M---------------------FEGEALGLGAMYETRTIRA  106 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~~-----~~-~---------------------~~~E~~~l~~L~~~~~~~v  106 (326)
                      ..++.|..+.+|+.... +..+++|+.....     .. .                     ...|...+..+... ++.+
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~   81 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV   81 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence            35778889999998876 4489999865321     01 0                     13566667777665 5889


Q ss_pred             cceeeecccCCCceEEEEeeecCCC
Q 020393          107 PRPFKVGALPTGGSYIIMEFIEFGS  131 (326)
Q Consensus       107 P~~~~~~~~~~~~~~~v~e~l~G~~  131 (326)
                      |+++...     ..+++|||++|..
T Consensus        82 ~~~~~~~-----~~~lv~e~~~g~~  101 (187)
T cd05119          82 PKPIDLN-----RHVLVMEFIGGDG  101 (187)
T ss_pred             CceEecC-----CCEEEEEEeCCCC
Confidence            9998764     4599999999965

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.39  E-value=1.5e-06  Score=75.43  Aligned_cols=136  Identities=24%  Similarity=0.274  Sum_probs=86.2

Q ss_pred             EeCCccccceEEEEeCCc-cEEEEecCCCC----------------------c-----chHHHHHHHHHHHHhcCCCCCc
Q 020393           56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----------------------P-----SMFEGEALGLGAMYETRTIRAP  107 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~----------------------~-----~~~~~E~~~l~~L~~~~~~~vP  107 (326)
                      +++.|=...||+-.+.++ .+.+|++....                      +     .=.++|...|..+.+. +++||
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA-GVrvP  133 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA-GVRVP  133 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCC
Confidence            566777788999776554 67889885320                      0     0135788899999886 69999


Q ss_pred             ceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhH
Q 020393          108 RPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG  187 (326)
Q Consensus       108 ~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~  187 (326)
                      +|+..-     ...++||++....                 .+++  .       .. ..+    . ..          +
T Consensus       134 ~Pi~~~-----~nVLvMEfIg~~g-----------------~pAP--~-------Lk-Dv~----~-e~----------~  166 (268)
T COG1718         134 EPIAFR-----NNVLVMEFIGDDG-----------------LPAP--R-------LK-DVP----L-EL----------E  166 (268)
T ss_pred             Cceeec-----CCeEEEEeccCCC-----------------CCCC--C-------cc-cCC----c-Cc----------h
Confidence            999876     4599999997541                 1111  0       00 000    0 00          0


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-c-cccCchh
Q 020393          188 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-A-CYYGHNE  257 (326)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~-~~~G~~~  257 (326)
                          +         .....+.+++.+..++.    ...||||||..-|||+. ++.++|||+ . .-..||.
T Consensus       167 ----e---------~~~~~~~~v~~~~~l~~----~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~  220 (268)
T COG1718         167 ----E---------AEGLYEDVVEYMRRLYK----EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN  220 (268)
T ss_pred             ----h---------HHHHHHHHHHHHHHHHH----hcCcccccchhhheEEE-CCeEEEEECccccccCCCc
Confidence                0         01223334444444442    35899999999999998 556999994 4 4577774

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.27  E-value=4.7e-06  Score=78.90  Aligned_cols=132  Identities=20%  Similarity=0.243  Sum_probs=89.0

Q ss_pred             EeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+|+|..+.|++-+..  +..|-+|+-...      -...+..|..+|..|.++-  -+-+++..-.+ +..-|+|+||.
T Consensus        80 ~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hP--givkLy~TFQD-~~sLYFvLe~A  156 (604)
T KOG0592|consen   80 ILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHP--GIVKLYFTFQD-EESLYFVLEYA  156 (604)
T ss_pred             eeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCC--CeEEEEEEeec-ccceEEEEEec
Confidence            3689999999998753  336777776431      1244567899999998541  24556655443 56889999999


Q ss_pred             cCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHH
Q 020393          128 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH  207 (326)
Q Consensus       128 ~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  207 (326)
                      +++.+          |.-|++...    |.                 +.|..||..+                       
T Consensus       157 ~nGdl----------l~~i~K~Gs----fd-----------------e~caR~YAAe-----------------------  182 (604)
T KOG0592|consen  157 PNGDL----------LDLIKKYGS----FD-----------------ETCARFYAAE-----------------------  182 (604)
T ss_pred             CCCcH----------HHHHHHhCc----ch-----------------HHHHHHHHHH-----------------------
Confidence            98755          777777654    21                 3445555431                       


Q ss_pred             HHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          208 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       208 ~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                       +++.++ ++    ...++||.|++|.|||+|+|+..-|=||.
T Consensus       183 -IldAle-yl----H~~GIIHRDlKPENILLd~dmhikITDFG  219 (604)
T KOG0592|consen  183 -ILDALE-YL----HSNGIIHRDLKPENILLDKDGHIKITDFG  219 (604)
T ss_pred             -HHHHHH-HH----HhcCceeccCChhheeEcCCCcEEEeecc
Confidence             111122 11    24599999999999999999988888874

>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.27  E-value=2.7e-06  Score=74.71  Aligned_cols=99  Identities=20%  Similarity=0.213  Sum_probs=68.2

Q ss_pred             HHHHHHHHhcccccCC--CCCcceeecCCCCCCeeecCCCCeEEEc---cc-c-ccCchhhhhhhh-h---hcCC---Ch
Q 020393          205 RGHRLMKNLAPLFEGV--NVEPCLLHGDLWSGNISSDKNGEPVILD---PA-C-YYGHNEAEFGMS-W---CAGF---GG  270 (326)
Q Consensus       205 ~~~~l~~~~~~~l~~~--~~~~~LiHgDl~~~NiL~~~~~~~~iID---~~-~-~~G~~~~Dla~~-~---~~~~---~~  270 (326)
                      ..+++.+....+|+..  ....+=||||||.+||.+- ++++.++|   |+ . .+.|..+|+|++ +   +.+.   ..
T Consensus       188 ~t~~f~e~~~~lf~~R~~~g~IRecHGDLhl~ni~l~-dg~~~LFDCIEFNd~fr~iDv~~D~AFl~MDLe~~gr~dla~  266 (337)
T COG2187         188 MTEEFLERHGPLFDRRIAEGFIRECHGDLHLRNICLW-DGEPALFDCIEFNDPFRFIDVLYDLAFLAMDLEFRGRKDLAR  266 (337)
T ss_pred             HHHHHHHhhhHHHHHHHhcCCceecccchhhcceeee-cCcceEEEEeecCCcchHHHHHHHHHHHHhhHhhcCChHHHH
Confidence            3344444444444321  3567889999999999995 45689999   43 3 599999999976 3   2233   35


Q ss_pred             HhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHh
Q 020393          271 SFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF  305 (326)
Q Consensus       271 ~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~  305 (326)
                      .|+++|.+...= ......+++|.-+..++++.+.
T Consensus       267 ~~ln~Yl~~tgD-~~gl~lLpfyla~rA~VRakV~  300 (337)
T COG2187         267 RFLNTYLEETGD-WDGLELLPFYLAYRAYVRAKVT  300 (337)
T ss_pred             HHHHHHHHHhCC-ccHHHHhHHHHHHHHHHHHhee
Confidence            799999877531 1225688999998888887554

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.22  E-value=5e-06  Score=69.86  Aligned_cols=72  Identities=17%  Similarity=0.112  Sum_probs=53.4

Q ss_pred             eCCccccceEEEEeC--CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           57 VGGGCINLASRYGTD--AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.|..+.+|++...  +..+++|.......    ..+..|.+.++.+..   ..+++++..... .+..++++|+++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~~~e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH---PNIVKLYGVFED-ENHLYLVMEYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC---CCeeeEeeeeec-CCeEEEEEecCCCC
Confidence            457888999999886  45899999976433    457788888887754   456777766543 46889999999985


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        77 ~l   78 (215)
T cd00180          77 SL   78 (215)
T ss_pred             cH
Confidence            43

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.20  E-value=1.1e-05  Score=78.12  Aligned_cols=99  Identities=13%  Similarity=0.061  Sum_probs=65.6

Q ss_pred             CCchhHHHHHHhcCCCcce------eeEeEeCCccccceEEEEeCCc-cEEEEecCCCCc--------------------
Q 020393           33 LSDDPIREWILSEGKATHI------TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGP--------------------   85 (326)
Q Consensus        33 ~~~~~i~~~l~~~~~~~~v------~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~--------------------   85 (326)
                      .+++++.+++.+. +|..+      .+-+|++--...+|++-++.+| .++||+.++.=+                    
T Consensus       140 ~~~ee~~~i~e~E-lG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~  218 (538)
T KOG1235|consen  140 FPWEEAFKIFEEE-LGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKF  218 (538)
T ss_pred             CCHHHHHHHHHHH-hCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHh
Confidence            4789999999987 33322      2335565556778999999887 699999876300                    


Q ss_pred             --------------------chHHHHHHHHHH----HHhcC---CCCCcceeeecccCCCceEEEEeeecCCCCCCc
Q 020393           86 --------------------SMFEGEALGLGA----MYETR---TIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGN  135 (326)
Q Consensus        86 --------------------~~~~~E~~~l~~----L~~~~---~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~  135 (326)
                                          =.+-.|++..+.    +++..   .+.||+|++.-.   +...++|||++|.++.+.
T Consensus       219 ~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s---t~RVLtME~~~G~~i~Dl  292 (538)
T KOG1235|consen  219 FPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLS---TKRVLTMEYVDGIKINDL  292 (538)
T ss_pred             CcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcC---cceEEEEEecCCccCCCH
Confidence                                001134433332    22322   577999998764   589999999999877543

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=98.19  E-value=1.9e-06  Score=77.42  Aligned_cols=132  Identities=20%  Similarity=0.273  Sum_probs=88.5

Q ss_pred             eCCccccceEEEEeCCc-cEEEEecCCC-------------------------CcchHHHHHHHHHHHHhcCCCCCccee
Q 020393           57 VGGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSMFEGEALGLGAMYETRTIRAPRPF  110 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~~~~E~~~l~~L~~~~~~~vP~~~  110 (326)
                      ++-|-.+.+|.+...+| .+++|+.+-.                         ++-...+|.+.++.|.++ ++|||+|+
T Consensus       100 IGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~-gfpVPkpi  178 (465)
T KOG2268|consen  100 IGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER-GFPVPKPI  178 (465)
T ss_pred             cccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc-CCCCCCcc
Confidence            45566788999988766 7888876420                         011134799999999998 79999999


Q ss_pred             eecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHH
Q 020393          111 KVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL  190 (326)
Q Consensus       111 ~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~  190 (326)
                      -.+     .+++||+.++|-++           .++|.+..+                         ...+         
T Consensus       179 D~~-----RH~Vvmelv~g~Pl-----------~~v~~v~d~-------------------------~~ly---------  208 (465)
T KOG2268|consen  179 DHN-----RHCVVMELVDGYPL-----------RQVRHVEDP-------------------------PTLY---------  208 (465)
T ss_pred             ccc-----ceeeHHHhhcccce-----------eeeeecCCh-------------------------HHHH---------
Confidence            654     88999999999765           233333321                         0000         


Q ss_pred             HHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc--ccccCchhhhh
Q 020393          191 KLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP--ACYYGHNEAEF  260 (326)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~--~~~~G~~~~Dl  260 (326)
                                   ..+-.++-.   +     ...++|||||.-=||++++++...+|||  +....||-.+.
T Consensus       209 -------------~~lm~~Iv~---l-----a~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~nA~~  259 (465)
T KOG2268|consen  209 -------------DDLMGLIVR---L-----ANHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHPNAEY  259 (465)
T ss_pred             -------------HHHHHHHHH---H-----HHcCceecccchheeEEecCCCEEEeechHhhccCCCccce
Confidence                         111111111   1     2358999999999999998887899994  45677775543

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.17  E-value=1.8e-05  Score=74.90  Aligned_cols=135  Identities=16%  Similarity=0.219  Sum_probs=86.9

Q ss_pred             eeEeEeCCccccceEEEEeC-Ccc-EEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AGS-FFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~~-~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-++.|+.|....||.+.-. .|+ |-+|+-...      +..-+..|..+|...   .+--|.+++..-.+ ...-|+|
T Consensus       144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~---ds~~vVKLyYsFQD-~~~LYLi  219 (550)
T KOG0605|consen  144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV---DSPWVVKLYYSFQD-KEYLYLI  219 (550)
T ss_pred             hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc---CCCcEEEEEEEecC-CCeeEEE
Confidence            45677899999999999864 454 566776542      223355677666542   23456677766543 5688999


Q ss_pred             EeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393          124 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  203 (326)
Q Consensus       124 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  203 (326)
                      ||||+|++.          ..-|-....                     ..++|..||..+.+.                
T Consensus       220 MEylPGGD~----------mTLL~~~~~---------------------L~e~~arfYiaE~vl----------------  252 (550)
T KOG0605|consen  220 MEYLPGGDM----------MTLLMRKDT---------------------LTEDWARFYIAETVL----------------  252 (550)
T ss_pred             EEecCCccH----------HHHHHhcCc---------------------CchHHHHHHHHHHHH----------------
Confidence            999999753          222222111                     125677777542110                


Q ss_pred             HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                           .++.+        ...+.||.|++|+|+|+|..|..-+=||.
T Consensus       253 -----AI~~i--------H~~gyIHRDIKPdNlLiD~~GHiKLSDFG  286 (550)
T KOG0605|consen  253 -----AIESI--------HQLGYIHRDIKPDNLLIDAKGHIKLSDFG  286 (550)
T ss_pred             -----HHHHH--------HHcCcccccCChhheeecCCCCEeecccc
Confidence                 11111        24589999999999999999988888874

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.12  E-value=2.1e-05  Score=73.33  Aligned_cols=72  Identities=13%  Similarity=0.027  Sum_probs=49.2

Q ss_pred             EeEeCCccccceEEEEeC--Ccc-EEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGS-FFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~-~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.++.|.+..||+....  ++. +.+|.....        ....+..|.++|+.|...  -.+|.++..     +..|+
T Consensus        23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~--~iv~~l~~~-----~~~~L   95 (365)
T PRK09188         23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI--GVVPQLLAT-----GKDGL   95 (365)
T ss_pred             ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC--CCCcEEEEc-----CCcEE
Confidence            455788999999998653  344 466764321        123478899999999753  235666543     46799


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|..+
T Consensus        96 VmE~~~G~~L  105 (365)
T PRK09188         96 VRGWTEGVPL  105 (365)
T ss_pred             EEEccCCCCH
Confidence            9999999655

>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]

Probab=98.05  E-value=9.2e-05  Score=62.40  Aligned_cols=165  Identities=21%  Similarity=0.204  Sum_probs=90.4

Q ss_pred             cccceEEEEeCCccEEEE----ecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC---
Q 020393           61 CINLASRYGTDAGSFFVK----TNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR---  133 (326)
Q Consensus        61 ~~n~~y~v~~~~~~~vlK----~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~---  133 (326)
                      .++..|.|+..+|.-++|    +....  +.. .=..++.+-..   .-+.+++..+     ...++||+..|..+.   
T Consensus        24 ~ssrllpv~~~ggsa~~~amlk~~~~~--eer-rG~~ll~ww~G---~Gaarvla~d-----~~alLlEra~~~rsl~~l   92 (274)
T COG3570          24 HSSRLLPVRRRGGSAIAKAMLKKADLE--EER-RGADLLAWWDG---IGAARVLAQD-----DNALLLERAGGERSLDVL   92 (274)
T ss_pred             cccceEEEEecCchhHHHHHhhhccch--Hhh-ccchhhhhhhc---CCcchhhccC-----ccHHHHHhccccchHHHH
Confidence            345667777666543333    33221  111 11334566554   4467777665     458899999887541   


Q ss_pred             ------C-cHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 020393          134 ------G-NQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG  206 (326)
Q Consensus       134 ------~-~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  206 (326)
                            . .-+-+.+.++++|+-..+++      +..        .+...|-+.+.        ..+.+   +..+.-..
T Consensus        93 ~~~G~Dd~aTrIac~a~~rlh~Prp~pp------p~L--------~pL~~wf~sLf--------~~a~~---d~~i~v~a  147 (274)
T COG3570          93 VRDGNDDAATRIACEALARLHAPRPSPP------PEL--------LPLERWFESLF--------RKARQ---DGSIYVEA  147 (274)
T ss_pred             HHhCCchHHHHHHHHHHHHhhCCCCCCC------ccc--------ccHHHHHHHHH--------HHHhh---cCCcchhH
Confidence                  1 23556788999998754311      100        11122221111        11111   11111111


Q ss_pred             HHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhhh
Q 020393          207 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWC  265 (326)
Q Consensus       207 ~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~~  265 (326)
                      .++.   +.++.. +...+.+|||+|.+|||=.+...=.+||+...+|++.||.+-+.|
T Consensus       148 A~~A---~~LL~~-p~di~pLHGDlHH~Nild~~~rGWlvIDPkgl~Gdrg~D~ANlf~  202 (274)
T COG3570         148 ARAA---QTLLDT-PRDIRPLHGDLHHGNILDGDRRGWLVIDPKGLIGDRGFDYANLFC  202 (274)
T ss_pred             HHHH---HHHhcC-ccccccCcccccccccccCCcCceEEEccccccCccccchHhhhc
Confidence            1111   223333 467899999999999996444223479999899999999997765

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.01  E-value=4.1e-05  Score=70.52  Aligned_cols=138  Identities=17%  Similarity=0.117  Sum_probs=89.0

Q ss_pred             eeeEeEeCCccccceEEEEeCCc--cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ..-++.+|.|....||.++..+.  -|-+|+-....      ....+.|.++|+.+..   --.|++|..-++ +...++
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH---PFlPTLYa~fet-~~~~cl  154 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH---PFLPTLYASFET-DKYSCL  154 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC---Cccchhhheeec-cceeEE
Confidence            34466789999999999987653  56778765321      2334678888887753   238999987655 678999


Q ss_pred             EEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHH
Q 020393          123 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI  202 (326)
Q Consensus       123 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~  202 (326)
                      +|||++|+++          -...|+++..  .|                 .++-..||..+                  
T Consensus       155 ~meyCpGGdL----------~~LrqkQp~~--~f-----------------se~~aRFYaAE------------------  187 (459)
T KOG0610|consen  155 VMEYCPGGDL----------HSLRQKQPGK--RF-----------------SESAARFYAAE------------------  187 (459)
T ss_pred             EEecCCCccH----------HHHHhhCCCC--cc-----------------chhhHHHHHHH------------------
Confidence            9999999754          2223333321  01                 11222334321                  


Q ss_pred             HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          203 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       203 ~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                            ++-.++ +|    ...++|=.||+|.|||+.+||...+.||+
T Consensus       188 ------vl~ALE-YL----HmlGivYRDLKPENILvredGHIMLsDFD  224 (459)
T KOG0610|consen  188 ------VLLALE-YL----HMLGIVYRDLKPENILVREDGHIMLSDFD  224 (459)
T ss_pred             ------HHHHHH-HH----HhhceeeccCCcceeEEecCCcEEeeecc
Confidence                  111111 22    23588999999999999999999999964

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=97.97  E-value=5.9e-05  Score=70.74  Aligned_cols=76  Identities=17%  Similarity=0.127  Sum_probs=51.5

Q ss_pred             eEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.++.|..+.||++....  ..+.+|+....      ....+..|.++++.+..   -.+.+++..... ++..+++|
T Consensus         5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~   80 (376)
T cd05598           5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFVM   80 (376)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCEEEEEE
Confidence            46778999999999987643  36888987531      12335668877777643   234555544332 56889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        81 E~~~~g~L   88 (376)
T cd05598          81 DYIPGGDM   88 (376)
T ss_pred             eCCCCCcH
Confidence            99998755

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.93  E-value=0.00014  Score=68.05  Aligned_cols=141  Identities=20%  Similarity=0.206  Sum_probs=89.6

Q ss_pred             EeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC-ceEEEEeeecCC
Q 020393           56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFIEFG  130 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~-~~~~v~e~l~G~  130 (326)
                      .++.|....+|+-...++ .+.||......   ...+..|.+++..+..   -.+-+++++... .+ ...+||||++.+
T Consensus        82 ~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H---~Nlv~LlGyC~e-~~~~~~LVYEym~nG  157 (361)
T KOG1187|consen   82 LIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRH---PNLVKLLGYCLE-GGEHRLLVYEYMPNG  157 (361)
T ss_pred             ceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCC---cCcccEEEEEec-CCceEEEEEEccCCC
Confidence            466777899999998885 67888654422   3448889988888873   245667777653 34 489999999976


Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH
Q 020393          131 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM  210 (326)
Q Consensus       131 ~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~  210 (326)
                      ++          -..||.....                     ..+|..     |+.-.+..              .+.+
T Consensus       158 sL----------~d~L~~~~~~---------------------~L~W~~-----R~kIa~g~--------------A~gL  187 (361)
T KOG1187|consen  158 SL----------EDHLHGKKGE---------------------PLDWET-----RLKIALGA--------------ARGL  187 (361)
T ss_pred             CH----------HHHhCCCCCC---------------------CCCHHH-----HHHHHHHH--------------HHHH
Confidence            55          2234442210                     025653     22221111              1112


Q ss_pred             HHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cccCc
Q 020393          211 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGH  255 (326)
Q Consensus       211 ~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~  255 (326)
                      +    ++.. ..++.+||+|+++.|||+|++-.+-|-||. +..++
T Consensus       188 ~----yLH~-~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  188 A----YLHE-GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP  228 (361)
T ss_pred             H----HHcc-CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence            2    2221 356799999999999999988778888973 44444

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=97.93  E-value=6.2e-05  Score=70.33  Aligned_cols=76  Identities=17%  Similarity=0.115  Sum_probs=49.5

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.++.|..+.||++...  +..|.+|+....      ....+..|..++..+..   ..+++++..... .+..|+||
T Consensus         5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~---~~iv~~~~~~~~-~~~~~lv~   80 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS---LWVVKMFYSFQD-KLNLYLIM   80 (363)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCeEEEEE
Confidence            4567888999999998764  237888987531      12335567766665532   235555544332 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|+.+
T Consensus        81 E~~~gg~L   88 (363)
T cd05628          81 EFLPGGDM   88 (363)
T ss_pred             cCCCCCcH
Confidence            99998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=97.92  E-value=5.2e-05  Score=70.52  Aligned_cols=77  Identities=13%  Similarity=0.084  Sum_probs=50.9

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ..++.++.|..+.||++...  +..|++|......    ...+..|.++++.+..   -.+.+++..... .+..+++||
T Consensus        77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e  152 (353)
T PLN00034         77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH---PNVVKCHDMFDH-NGEIQVLLE  152 (353)
T ss_pred             hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC---CCcceeeeEecc-CCeEEEEEe
Confidence            34566888999999998764  3478999875321    2345678887777653   123444443322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|..+
T Consensus       153 ~~~~~~L  159 (353)
T PLN00034        153 FMDGGSL  159 (353)
T ss_pred             cCCCCcc
Confidence            9998754

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=97.92  E-value=7.9e-05  Score=68.55  Aligned_cols=76  Identities=9%  Similarity=-0.023  Sum_probs=48.4

Q ss_pred             EeEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           54 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ++.++.|..+.||++...    . ..+.+|+....       ....+..|..+++.+..+  -.++.++..... ++..+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~   81 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS--PFLVTLHYAFQT-EAKLH   81 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCC--CCcccEEEEEec-CCEEE
Confidence            566888999999998752    2 35778876421       112345677777777543  124444433322 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++|||++|..+
T Consensus        82 lv~e~~~~g~L   92 (332)
T cd05614          82 LILDYVSGGEM   92 (332)
T ss_pred             EEEeCCCCCcH
Confidence            99999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=97.92  E-value=6.7e-05  Score=69.96  Aligned_cols=77  Identities=17%  Similarity=0.104  Sum_probs=49.5

Q ss_pred             eeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ..++.++.|..+.||++....  ..+++|+.+..      ....+..|..++..+..   -.+++++..... .+..++|
T Consensus         4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~lv   79 (360)
T cd05627           4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG---AWVVKMFYSFQD-KRNLYLI   79 (360)
T ss_pred             eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEE
Confidence            346778889999999987643  36888876431      12334567666655532   234455544332 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|+.+
T Consensus        80 ~E~~~gg~L   88 (360)
T cd05627          80 MEFLPGGDM   88 (360)
T ss_pred             EeCCCCccH
Confidence            999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=97.91  E-value=0.00013  Score=67.34  Aligned_cols=77  Identities=16%  Similarity=0.157  Sum_probs=50.7

Q ss_pred             EeEeCCccccceEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.++.|..+.||+...      .. ..+.+|......    ...+..|..++..+..+  -.+.+++.......+..++
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~~~l   89 (338)
T cd05102          12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH--LNVVNLLGACTKPNGPLMV   89 (338)
T ss_pred             eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC--cceeeEEeEecCCCCceEE
Confidence            46689999999999863      11 258888765321    23356788888877543  2355555543322356789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|+++
T Consensus        90 v~ey~~~g~L   99 (338)
T cd05102          90 IVEFCKYGNL   99 (338)
T ss_pred             EEecCCCCcH
Confidence            9999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=97.89  E-value=3.4e-05  Score=72.34  Aligned_cols=77  Identities=13%  Similarity=0.055  Sum_probs=49.8

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-++.++.|..+.+|++...  +..|++|.....      ....+..|..+++.+..   -.+++++..... ++..++|
T Consensus        46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h---~~iv~~~~~~~~-~~~~~lv  121 (370)
T cd05596          46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS---EWIVQLHYAFQD-DKYLYMV  121 (370)
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEEEE
Confidence            44566888999999998764  337888986421      12334567777766643   224445443322 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|+++
T Consensus       122 ~Ey~~gg~L  130 (370)
T cd05596         122 MEYMPGGDL  130 (370)
T ss_pred             EcCCCCCcH
Confidence            999998755

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=97.88  E-value=0.00013  Score=72.74  Aligned_cols=183  Identities=13%  Similarity=0.073  Sum_probs=105.0

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc--cEEEEec-CCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecc-cC-----CC
Q 020393           50 HITKICPVGGGCINLASRYGTDAG--SFFVKTN-RSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGA-LP-----TG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~-~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-----~~  118 (326)
                      +|+=.+-|.+|.+..||.+++..+  +|++|.- ..+  ..+.+..|+++++.|..+     |.++.+-+ ..     .+
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh-----~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGH-----KNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCC-----CceeeEeccccccccCCC
Confidence            344444578899999999988544  7888754 332  245578999999999865     44444332 10     12


Q ss_pred             ---ceEEEEeeecCCCCCCcHHHHHHHHH-HHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHH
Q 020393          119 ---GSYIIMEFIEFGSSRGNQSVFGKKLA-EMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL  194 (326)
Q Consensus       119 ---~~~~v~e~l~G~~~~~~~~~lg~~La-~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~  194 (326)
                         ..+++|||+.|..+       .+.|- +++....                       +   +.+             
T Consensus       113 ~~~EvllLmEyC~gg~L-------vd~mn~Rlq~~lt-----------------------e---~eV-------------  146 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGGSL-------VDFMNTRLQTRLT-----------------------E---DEV-------------  146 (738)
T ss_pred             ceeEEEeehhhccCCcH-------HHHHHHHHhccCC-----------------------h---HHH-------------
Confidence               45788999997644       12221 2222110                       0   001             


Q ss_pred             hhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cc---cCc-hhhhhhhhhh----
Q 020393          195 DQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGH-NEAEFGMSWC----  265 (326)
Q Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~---~G~-~~~Dla~~~~----  265 (326)
                              .+.+....+.+..+.   ..++.|||.||+..|||+..++.-.+.||. +.   ... -..++.++..    
T Consensus       147 --------LkIf~dv~~AVa~mH---~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k  215 (738)
T KOG1989|consen  147 --------LKIFYDVCEAVAAMH---YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEK  215 (738)
T ss_pred             --------HHHHHHHHHHHHHHh---cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHh
Confidence                    111222222222222   367899999999999999999888999984 22   222 3345554421    


Q ss_pred             ---cCC-ChHhHHHhhhhCCCC---cCHHHHHHHHHH
Q 020393          266 ---AGF-GGSFYNSYFEVMPKQ---PGFEKRRDLYML  295 (326)
Q Consensus       266 ---~~~-~~~fl~~Y~~~~~l~---~~~~~r~~~y~l  295 (326)
                         ..+ .+++++-|.- .|++   +.|.-=+-+|.|
T Consensus       216 ~TTp~YRsPEMIDlysg-~pI~eKsDIWALGclLYkL  251 (738)
T KOG1989|consen  216 YTTPQYRSPEMIDLYSG-LPIGEKSDIWALGCLLYKL  251 (738)
T ss_pred             hCCccccChHHHhhhcC-CCCcchhHHHHHHHHHHHH
Confidence               111 3678888853 3443   345444444443

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=97.85  E-value=0.00011  Score=67.49  Aligned_cols=76  Identities=12%  Similarity=0.029  Sum_probs=47.7

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|....||++...+  ..+++|+....      ....+..|..++..+...  -.++.++..... .+..|++||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E   81 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYFVME   81 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC--CceeeeEEEEEc-CCEEEEEEc
Confidence            5668889999999997643  36889987531      112234566655555421  224444443322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        82 ~~~~g~L   88 (324)
T cd05587          82 YVNGGDL   88 (324)
T ss_pred             CCCCCcH
Confidence            9998754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=97.83  E-value=0.00021  Score=62.69  Aligned_cols=73  Identities=22%  Similarity=0.137  Sum_probs=48.6

Q ss_pred             EeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           56 PVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      .++.|..+.+|+.+..  +..+++|......    ...+..|.++++.+..   -.+++++..... .+..+++|||++|
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~   77 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVMELVQG   77 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEcC-CCCeEEEEeeccC
Confidence            4677888999998763  3368889765321    2346678777777642   234555554433 4678999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus        78 ~~L   80 (252)
T cd05084          78 GDF   80 (252)
T ss_pred             CcH
Confidence            754

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=97.82  E-value=0.00013  Score=68.54  Aligned_cols=76  Identities=17%  Similarity=0.180  Sum_probs=51.1

Q ss_pred             EeEeCCccccceEEEEe------CCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGT------DAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~------~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.++.|..+.||+.+.      +.+ .+.+|+....    ....+..|.+++..+..+  -.+.+++..... .+..++
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H--pnIv~l~~~~~~-~~~~~l  116 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--INIVNLLGACTV-GGPTLV  116 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC--cceeeeeeeecc-CCccee
Confidence            46688899999999863      122 5788876532    123456788888888543  235555554433 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|+++
T Consensus       117 v~E~~~~g~L  126 (375)
T cd05104         117 ITEYCCYGDL  126 (375)
T ss_pred             eehhccCCcH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=97.82  E-value=0.00031  Score=61.86  Aligned_cols=76  Identities=20%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .+.++.|..+.+|+....+..+++|...... ...+..|...++.+..   ..+.+++.......+..+++||+++|.++
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   87 (256)
T cd05082          11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMAKGSL   87 (256)
T ss_pred             eeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCC---CCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence            3557778888999998777789999876532 2345678777776643   23444443322214578999999998655

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=97.81  E-value=8.7e-05  Score=68.67  Aligned_cols=75  Identities=15%  Similarity=0.073  Sum_probs=48.9

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||++...  +..|++|+....      ....+..|..++..+..   -.+++++..... ++..++|||
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (350)
T cd05573           6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS---PWIVKLYYSFQD-EEHLYLVME   81 (350)
T ss_pred             EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC---CCccchhhheec-CCeEEEEEc
Confidence            466888899999999865  347888987531      12345567776666642   224444433222 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        82 ~~~~~~L   88 (350)
T cd05573          82 YMPGGDL   88 (350)
T ss_pred             CCCCCCH
Confidence            9998654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.81  E-value=6.1e-05  Score=72.95  Aligned_cols=139  Identities=19%  Similarity=0.202  Sum_probs=82.5

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      -.+.|+.++-|.+..|-++..-|-  -|..|.-+..      +.+...+|..+|   ++...-=|-++|+.-.+ .+.-|
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDIL---AEADn~WVVrLyySFQD-kdnLY  705 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDIL---AEADNEWVVRLYYSFQD-KDNLY  705 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhH---hhcCCcceEEEEEEecc-CCceE
Confidence            367889999998888887764332  3444444321      122344566554   33333457788876544 56889


Q ss_pred             EEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChH
Q 020393          122 IIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST  201 (326)
Q Consensus       122 ~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~  201 (326)
                      +||+||+|++.          +.-|-+...    |.                 ++-..||..        +         
T Consensus       706 FVMdYIPGGDm----------MSLLIrmgI----Fe-----------------E~LARFYIA--------E---------  737 (1034)
T KOG0608|consen  706 FVMDYIPGGDM----------MSLLIRMGI----FE-----------------EDLARFYIA--------E---------  737 (1034)
T ss_pred             EEEeccCCccH----------HHHHHHhcc----CH-----------------HHHHHHHHH--------H---------
Confidence            99999999753          322222222    21                 111223321        0         


Q ss_pred             HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccc
Q 020393          202 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY  252 (326)
Q Consensus       202 ~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~  252 (326)
                          +.-.++.+        ..-++||.|++|+|||+|.||..-+-||..|
T Consensus       738 ----ltcAiesV--------HkmGFIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  738 ----LTCAIESV--------HKMGFIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             ----HHHHHHHH--------HhccceecccCccceEEccCCceeeeecccc
Confidence                11112211        3458999999999999999998889997543

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.80  E-value=0.0003  Score=62.31  Aligned_cols=75  Identities=20%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             eEeEeCCccccceEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           53 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      -.+.++.|..+.+|++...+ ..+++|.....  ....+..|.++++.+..   ..+.+++....  ++..+++||+++|
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~--~~~~~lv~e~~~~   84 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMSK   84 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCC---CCcceEEEEEC--CCCcEEEEEcCCC
Confidence            34567888889999987644 47888988642  23446678888877743   23444444322  4568999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus        85 ~~L   87 (262)
T cd05071          85 GSL   87 (262)
T ss_pred             CcH
Confidence            765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=97.80  E-value=0.00015  Score=66.51  Aligned_cols=78  Identities=12%  Similarity=0.023  Sum_probs=48.1

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|....+|++...  +..+++|.....      ....+..|..++..+....--.+.+++..... .+..|+|||
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~lv~E   82 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCFVME   82 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEEEEc
Confidence            456788889999998764  337888987531      11234456665555543211234445443322 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|..+
T Consensus        83 ~~~~~~L   89 (324)
T cd05589          83 YAAGGDL   89 (324)
T ss_pred             CCCCCcH
Confidence            9998754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=97.79  E-value=0.00013  Score=66.92  Aligned_cols=74  Identities=11%  Similarity=0.012  Sum_probs=46.6

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++...+  ..+.+|+....      ....+..|.+++..+..+  -.+++++..... .+..|+||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--p~i~~~~~~~~~-~~~~~lv~E~~   78 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--PFLTALHCCFQT-KDRLFFVMEYV   78 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCeEEEEEeCC
Confidence            36788889999997643  36888987531      112244566666555433  234555543332 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        79 ~~~~L   83 (321)
T cd05591          79 NGGDL   83 (321)
T ss_pred             CCCcH
Confidence            98754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=97.79  E-value=0.00012  Score=67.32  Aligned_cols=76  Identities=13%  Similarity=-0.035  Sum_probs=49.6

Q ss_pred             eEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.++.|..+.||+....+  ..+++|+....      ....+..|..++..+..   -.+++++..... .+..|++|
T Consensus         5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv~   80 (333)
T cd05600           5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS---EWLVKLLYAFQD-DEYLYLAM   80 (333)
T ss_pred             EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC---CCCccEEEEEEc-CCEEEEEE
Confidence            35678889999999998643  37888987531      12234456666665542   234555544332 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        81 e~~~g~~L   88 (333)
T cd05600          81 EYVPGGDF   88 (333)
T ss_pred             eCCCCCCH
Confidence            99998765

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=97.79  E-value=9.8e-05  Score=69.44  Aligned_cols=77  Identities=18%  Similarity=0.106  Sum_probs=50.7

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ..++.++.|..+.||++... ++ .+.+|.....      ....+..|..+++.+..   -.+++++..... .+..++|
T Consensus         4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h---~~iv~~~~~~~~-~~~~~lv   79 (382)
T cd05625           4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN---EWVVRLYYSFQD-KDNLYFV   79 (382)
T ss_pred             EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC---CcCCeEEEEEEe-CCEEEEE
Confidence            45677899999999998763 33 6788876531      12235567777766642   235555544332 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|+.+
T Consensus        80 ~E~~~gg~L   88 (382)
T cd05625          80 MDYIPGGDM   88 (382)
T ss_pred             EeCCCCCcH
Confidence            999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=97.78  E-value=0.00028  Score=66.42  Aligned_cols=77  Identities=17%  Similarity=0.106  Sum_probs=51.4

Q ss_pred             eeEeEeCCccccceEEEEeC-C-ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ..++.++.|..+.||++... + ..|.+|+....   .   ...+..|..+++.+..   -.+++++..... .+..+++
T Consensus         4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~l~~~~~~-~~~~~lv   79 (381)
T cd05626           4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN---EWVVKLYYSFQD-KDNLYFV   79 (381)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC---CCeeeeEEEEec-CCEEEEE
Confidence            45678999999999998763 2 36888987531   1   1235567777766643   235555554432 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|+.+
T Consensus        80 ~E~~~gg~L   88 (381)
T cd05626          80 MDYIPGGDM   88 (381)
T ss_pred             EecCCCCcH
Confidence            999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=97.77  E-value=0.00012  Score=66.99  Aligned_cols=74  Identities=15%  Similarity=0.057  Sum_probs=47.0

Q ss_pred             eEeCCccccceEEEEeC----C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           55 CPVGGGCINLASRYGTD----A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +.++.|..+.||++...    . ..+.+|+....     ....+..|.++++.+..   -.+++++..... ++..|+||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~   77 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH---PFIVKLHYAFQT-EGKLYLIL   77 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC---CCcccEEEEEEc-CCEEEEEE
Confidence            45778888999988642    2 36888876531     12234457777666642   234555544332 56889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        78 e~~~~~~L   85 (318)
T cd05582          78 DFLRGGDL   85 (318)
T ss_pred             cCCCCCcH
Confidence            99998654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=97.77  E-value=0.00041  Score=60.72  Aligned_cols=73  Identities=21%  Similarity=0.090  Sum_probs=48.0

Q ss_pred             EeCCccccceEEEEeCCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           56 PVGGGCINLASRYGTDAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .++.|..+.+|+....++ .+++|......    ...+..|.+.++.+..   -.+++++..... .+..+++||+++|.
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~   77 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH---PNIVKLIGVCTQ-RQPIYIVMELVPGG   77 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEec-CCccEEEEECCCCC
Confidence            467788899999876554 68889875432    1235567777766642   234555544332 46789999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        78 ~L   79 (250)
T cd05085          78 DF   79 (250)
T ss_pred             cH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=97.77  E-value=0.00013  Score=66.85  Aligned_cols=74  Identities=15%  Similarity=0.078  Sum_probs=45.4

Q ss_pred             EeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++.... + .+.+|+....      ....+..|..++..+..+  -.+++++..... .+..|+||||+
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~-~~~~~iv~Ey~   78 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLYCCFQT-PDRLFFVMEFV   78 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCC--CchhceeeEEEc-CCEEEEEEcCC
Confidence            46788889999998643 3 6888876431      112233455555544332  234555544332 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        79 ~~g~L   83 (320)
T cd05590          79 NGGDL   83 (320)
T ss_pred             CCchH
Confidence            98654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=97.75  E-value=0.00012  Score=67.15  Aligned_cols=74  Identities=16%  Similarity=0.094  Sum_probs=47.2

Q ss_pred             eEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           55 CPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      +.++.|....+|++...    . ..+++|+....       ....+..|..+++.+...   .+.+++..... ++..|+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~~~~~~~~-~~~~~l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHP---FIVDLIYAFQT-GGKLYL   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCC---chhceeeEEec-CCeEEE
Confidence            56788999999998752    2 25888876421       112345677777777531   24444433322 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|..+
T Consensus        78 v~e~~~~~~L   87 (323)
T cd05584          78 ILEYLSGGEL   87 (323)
T ss_pred             EEeCCCCchH
Confidence            9999998754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.74  E-value=0.00012  Score=68.65  Aligned_cols=75  Identities=16%  Similarity=0.063  Sum_probs=49.3

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||++... + ..+.+|.....      ....+..|.++++.+..   -.+++++..... .+..|+|||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~~~~~~~~-~~~~~lv~E   81 (377)
T cd05629           6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS---PWVVSLYYSFQD-AQYLYLIME   81 (377)
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC---CCcceEEEEEEc-CCeeEEEEe
Confidence            567888999999998763 3 36888876421      12335567777666542   235555554332 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|..+
T Consensus        82 ~~~gg~L   88 (377)
T cd05629          82 FLPGGDL   88 (377)
T ss_pred             CCCCCcH
Confidence            9998755

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.74  E-value=9.8e-05  Score=68.85  Aligned_cols=75  Identities=16%  Similarity=0.096  Sum_probs=50.3

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||++...  +..+++|+....      ....+..|..++..+..   -.+++++..... .+..++|||
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---~~iv~~~~~~~~-~~~~~lv~E   81 (364)
T cd05599           6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN---PWVVKLYYSFQD-ENYLYLIME   81 (364)
T ss_pred             EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCeEEEEEC
Confidence            567888999999998764  236888987531      12234567777776642   235555554332 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|..+
T Consensus        82 ~~~~g~L   88 (364)
T cd05599          82 YLPGGDM   88 (364)
T ss_pred             CCCCcHH
Confidence            9998644

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.73  E-value=0.00049  Score=60.79  Aligned_cols=74  Identities=23%  Similarity=0.248  Sum_probs=48.4

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .+.++.|..+.+|++...++ .+++|......  ...+..|.++++.+...  -.+| ++....  .+..+++||+++|.
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~--~i~~-~~~~~~--~~~~~~v~e~~~~~   85 (260)
T cd05069          11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHD--KLVP-LYAVVS--EEPIYIVTEFMGKG   85 (260)
T ss_pred             eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCC--Ceee-EEEEEc--CCCcEEEEEcCCCC
Confidence            35678888899999876543 78889865422  23456788877777532  1222 333221  45789999999986


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        86 ~L   87 (260)
T cd05069          86 SL   87 (260)
T ss_pred             CH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=97.73  E-value=0.00012  Score=67.36  Aligned_cols=75  Identities=19%  Similarity=0.123  Sum_probs=48.0

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|....+|++... + ..+++|.....      ....+..|..+++.+..   -.+++++..... .+..++|||
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (330)
T cd05601           6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS---PWIPQLQYAFQD-KDNLYLVME   81 (330)
T ss_pred             EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeEEEEEC
Confidence            466788889999998764 3 36888887531      12335566666554432   234555543322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|..+
T Consensus        82 ~~~~~~L   88 (330)
T cd05601          82 YQPGGDL   88 (330)
T ss_pred             CCCCCCH
Confidence            9998754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=97.72  E-value=0.00048  Score=60.63  Aligned_cols=77  Identities=19%  Similarity=0.155  Sum_probs=52.5

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .-.+.++.|..+.+|+++..++ .+++|.....  ....+..|...++.+...   .+.+++..... .+..+++|||++
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~iv~e~~~   82 (256)
T cd05114           7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHP---KLVQLYGVCTQ-QKPLYIVTEFME   82 (256)
T ss_pred             EEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCC---CceeEEEEEcc-CCCEEEEEEcCC
Confidence            3356788898999999887655 7888876542  234566788888777531   23444444332 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        83 ~~~L   86 (256)
T cd05114          83 NGCL   86 (256)
T ss_pred             CCcH
Confidence            8755

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=97.72  E-value=0.0007  Score=60.93  Aligned_cols=75  Identities=15%  Similarity=0.082  Sum_probs=48.8

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.++.|....+|++....  ..+++|.......   ..+..|...++.+..   -.+++++..... ++..+++|||++
T Consensus        17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   92 (292)
T cd06644          17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH---PYIVKLLGAFYW-DGKLWIMIEFCP   92 (292)
T ss_pred             hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CcEeeeEEEEEe-CCeEEEEEecCC
Confidence            4457888889999998743  3688888764332   234456666665542   234555544332 578999999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        93 ~~~l   96 (292)
T cd06644          93 GGAV   96 (292)
T ss_pred             CCcH
Confidence            8754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=97.71  E-value=0.00064  Score=62.41  Aligned_cols=73  Identities=11%  Similarity=-0.058  Sum_probs=44.4

Q ss_pred             EeCCccccceEEEEeC-C-ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD-A-GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++... + ..+.+|+....   .   ...+..|.++++.+..   -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h---p~i~~~~~~~~~-~~~~~lv~E~~   77 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFVMEYA   77 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCCceEEEEEc-CCEEEEEEeCC
Confidence            4678889999998753 3 36888887531   1   1223345555554432   234455443322 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        78 ~~~~L   82 (325)
T cd05594          78 NGGEL   82 (325)
T ss_pred             CCCcH
Confidence            98654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=97.71  E-value=0.00028  Score=65.03  Aligned_cols=75  Identities=12%  Similarity=0.048  Sum_probs=48.9

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||++...  +..|++|+....      ....+..|..++..+..   -.++.++..... ++..|+|||
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (331)
T cd05597           6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR---RWITNLHYAFQD-ENNLYLVMD   81 (331)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCceEEEEec-CCeEEEEEe
Confidence            567888999999998764  337888986421      12335566666655532   234555544332 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        82 ~~~g~~L   88 (331)
T cd05597          82 YYVGGDL   88 (331)
T ss_pred             cCCCCcH
Confidence            9998765

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=97.70  E-value=0.00055  Score=60.40  Aligned_cols=78  Identities=22%  Similarity=0.219  Sum_probs=51.7

Q ss_pred             eeeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..-.+.++.|..+.+|+....++ .+++|......  ...+..|...++.+..   -.+++++..... .+..+++||++
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~   83 (261)
T cd05068           8 IQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH---PKLIQLYAVCTL-EEPIYIVTELM   83 (261)
T ss_pred             eeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC---CCccceeEEEec-CCCeeeeeecc
Confidence            34457788888899999775443 68888876432  3446678777777753   234455544322 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        84 ~~~~L   88 (261)
T cd05068          84 KYGSL   88 (261)
T ss_pred             cCCcH
Confidence            88755

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=97.70  E-value=0.00047  Score=62.80  Aligned_cols=75  Identities=13%  Similarity=0.010  Sum_probs=50.8

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|..+.+|++...+  ..+++|......      ...+..|.+.++.+..   -.+++++..... .+..+++||
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e   81 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH---PFLPTLYASFQT-ETYLCLVMD   81 (316)
T ss_pred             eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC---CCchhheeeeec-CCEEEEEEE
Confidence            4567888889999998743  478999876421      1235567777776652   245666654432 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        82 ~~~~~~L   88 (316)
T cd05574          82 YCPGGEL   88 (316)
T ss_pred             ecCCCCH
Confidence            9998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=97.70  E-value=0.00041  Score=61.22  Aligned_cols=78  Identities=22%  Similarity=0.166  Sum_probs=51.7

Q ss_pred             eeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..-++.++.|..+.+|+....++ .+++|.....  ....+..|..+++.+...   .+.+++..... .+..+++||++
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~~   83 (261)
T cd05072           8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD---KLVRLYAVVTK-EEPIYIITEYM   83 (261)
T ss_pred             eEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCC---CeeeEEEEEcC-CCCcEEEEecC
Confidence            44567788898999999876544 6888876532  234456788777776432   34444433322 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        84 ~~~~L   88 (261)
T cd05072          84 AKGSL   88 (261)
T ss_pred             CCCcH
Confidence            98765

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=97.69  E-value=0.00023  Score=66.80  Aligned_cols=78  Identities=13%  Similarity=0.078  Sum_probs=48.6

Q ss_pred             eeeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|..+.||++....  ..+.+|+....      ....+..|..+++.+..   -.+.+++..... ++..++
T Consensus        45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~l  120 (370)
T cd05621          45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFCAFQD-DKYLYM  120 (370)
T ss_pred             CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEE
Confidence            3445668899999999988643  36788876421      12234556666655432   123444433222 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|+.+
T Consensus       121 v~Ey~~gg~L  130 (370)
T cd05621         121 VMEYMPGGDL  130 (370)
T ss_pred             EEcCCCCCcH
Confidence            9999998765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=97.69  E-value=0.00017  Score=66.42  Aligned_cols=77  Identities=12%  Similarity=-0.006  Sum_probs=51.1

Q ss_pred             eeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-.+.++.|....||++....  ..+++|.....      ....+..|..+++.+..   -.+.+++..... ++..+++
T Consensus        21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv   96 (329)
T PTZ00263         21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH---PFIVNMMCSFQD-ENRVYFL   96 (329)
T ss_pred             EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEc-CCEEEEE
Confidence            335668889999999997642  36888976431      12335678777777643   234555544332 5688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        97 ~e~~~~~~L  105 (329)
T PTZ00263         97 LEFVVGGEL  105 (329)
T ss_pred             EcCCCCChH
Confidence            999998755

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=97.69  E-value=0.00026  Score=64.80  Aligned_cols=74  Identities=16%  Similarity=0.084  Sum_probs=45.4

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++....  ..+++|.....      .......|..++..+..+  ..+++++..... .+..|++|||+
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E~~   78 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN--PFLTHLYCTFQT-KEHLFFVMEFL   78 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CCccCeeEEEEe-CCEEEEEECCC
Confidence            46778889999998642  36888886531      122234455555443332  234555544332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        79 ~~g~L   83 (316)
T cd05620          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            98754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=97.69  E-value=0.00016  Score=67.96  Aligned_cols=78  Identities=13%  Similarity=0.081  Sum_probs=49.3

Q ss_pred             eeeEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ..-++.++.|..+.+|++....  ..+++|+....      ....+..|..+++.+..   -.+++++..... .+..++
T Consensus        45 y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h---p~iv~~~~~~~~-~~~~~l  120 (371)
T cd05622          45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLYM  120 (371)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEEE
Confidence            3446678889999999998743  36888886421      12234456666655532   224445443322 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|+.+
T Consensus       121 v~Ey~~gg~L  130 (371)
T cd05622         121 VMEYMPGGDL  130 (371)
T ss_pred             EEcCCCCCcH
Confidence            9999998765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=97.69  E-value=0.0002  Score=66.34  Aligned_cols=76  Identities=13%  Similarity=0.006  Sum_probs=49.4

Q ss_pred             eEeEeCCccccceEEEEeC-Cc--cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           53 KICPVGGGCINLASRYGTD-AG--SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~--~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -++.++.|..+.||++... .+  .+++|....      .....+..|..+++.+..   -.+.+++..... .+..+++
T Consensus        34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv  109 (340)
T PTZ00426         34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH---PFCVNLYGSFKD-ESYLYLV  109 (340)
T ss_pred             EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC---CCCcceEEEEEe-CCEEEEE
Confidence            3567888999999998743 22  588887642      112335567777776643   234455544332 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|+.+
T Consensus       110 ~Ey~~~g~L  118 (340)
T PTZ00426        110 LEFVIGGEF  118 (340)
T ss_pred             EeCCCCCcH
Confidence            999998754

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=97.68  E-value=0.00024  Score=65.44  Aligned_cols=74  Identities=9%  Similarity=0.023  Sum_probs=48.0

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++....  ..+++|+....      ....+..|..+++.+..+  -.+++++..... .+..|++|||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~h--p~Iv~~~~~~~~-~~~~~lv~e~~   78 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH--PFLVGLHSCFQT-ESRLFFVIEFV   78 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CCCCceEEEEEc-CCEEEEEEeCC
Confidence            36778889999998643  36888887531      123355677777666543  234555544332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        79 ~~g~L   83 (329)
T cd05588          79 SGGDL   83 (329)
T ss_pred             CCCCH
Confidence            98754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=97.67  E-value=0.00029  Score=64.59  Aligned_cols=76  Identities=12%  Similarity=0.033  Sum_probs=45.1

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||++....  ..+.+|+....      .......|..++..+..+  -.++.++..... .+..++|||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E   81 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP--PFLTQLHSCFQT-MDRLYFVME   81 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CeEeeEEEEEec-CCEEEEEEc
Confidence            4567888899999987643  36888876531      111223444444443221  123444433322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        82 ~~~~g~L   88 (323)
T cd05616          82 YVNGGDL   88 (323)
T ss_pred             CCCCCCH
Confidence            9998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=97.66  E-value=0.00024  Score=64.55  Aligned_cols=133  Identities=15%  Similarity=0.186  Sum_probs=85.4

Q ss_pred             EeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++-+|-|....||.|...+ + -|-+|.-..      .+.+...+|..+|..+..  |+-|.-.+....  .+.-|+|++
T Consensus        30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h--PFiv~l~ysFQt--~~kLylVld  105 (357)
T KOG0598|consen   30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH--PFIVKLIYSFQT--EEKLYLVLD  105 (357)
T ss_pred             eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC--CcEeeeEEeccc--CCeEEEEEe
Confidence            4457888999999998643 3 466666543      123556788888887543  666766665543  478899999


Q ss_pred             eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393          126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  205 (326)
Q Consensus       126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  205 (326)
                      |+.|+.+            ..|-....  .|                 .++-..||..        +            .
T Consensus       106 ~~~GGeL------------f~hL~~eg--~F-----------------~E~~arfYla--------E------------i  134 (357)
T KOG0598|consen  106 YLNGGEL------------FYHLQREG--RF-----------------SEDRARFYLA--------E------------I  134 (357)
T ss_pred             ccCCccH------------HHHHHhcC--Cc-----------------chhHHHHHHH--------H------------H
Confidence            9999866            34433221  12                 1222333432        1            1


Q ss_pred             HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      +.    .+. .|    ....+||+|++|.|||++.+|...+-|+.
T Consensus       135 ~l----AL~-~L----H~~gIiyRDlKPENILLd~~GHi~LtDFg  170 (357)
T KOG0598|consen  135 VL----ALG-YL----HSKGIIYRDLKPENILLDEQGHIKLTDFG  170 (357)
T ss_pred             HH----HHH-HH----HhCCeeeccCCHHHeeecCCCcEEEeccc
Confidence            11    111 11    24589999999999999999999999975

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=97.66  E-value=0.0002  Score=63.79  Aligned_cols=74  Identities=19%  Similarity=0.137  Sum_probs=49.2

Q ss_pred             eEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           55 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +.++.|....+|+....+       ..+.+|......    ...+..|.++++.+..   -.+.+++..... .+..+++
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv   86 (280)
T cd05049          11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH---ENIVKFYGVCTE-GDPPIMV   86 (280)
T ss_pred             hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC---CCchheeeEEec-CCCeEEE
Confidence            456778888899876522       368888875422    2346678888777753   234455544333 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        87 ~e~~~~~~L   95 (280)
T cd05049          87 FEYMEHGDL   95 (280)
T ss_pred             EecCCCCCH
Confidence            999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=97.66  E-value=0.00069  Score=61.28  Aligned_cols=79  Identities=13%  Similarity=0.074  Sum_probs=50.4

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-.-++.++.|..+.+|++...  +..+++|.....   ....+..|..+++.+..   ..+.+++..... .+..+++|
T Consensus        20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~   95 (297)
T cd06656          20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVM   95 (297)
T ss_pred             hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCEEEEee
Confidence            3445677888889999998752  347888877532   12335566666665532   234444443222 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        96 e~~~~~~L  103 (297)
T cd06656          96 EYLAGGSL  103 (297)
T ss_pred             cccCCCCH
Confidence            99998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.66  E-value=0.00036  Score=64.15  Aligned_cols=139  Identities=19%  Similarity=0.237  Sum_probs=85.8

Q ss_pred             CCccccceEEEEeCCc-cEEEEecCCC-------------------------Ccch----HHHHHHHHHHHHhcCCCCCc
Q 020393           58 GGGCINLASRYGTDAG-SFFVKTNRSI-------------------------GPSM----FEGEALGLGAMYETRTIRAP  107 (326)
Q Consensus        58 ~~G~~n~~y~v~~~~~-~~vlK~~~~~-------------------------~~~~----~~~E~~~l~~L~~~~~~~vP  107 (326)
                      +.|-..-||-++..+| .|.+|++...                         ++.+    .++|.+-|..|.+. ++|+|
T Consensus       153 STGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a-GIP~P  231 (520)
T KOG2270|consen  153 STGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA-GIPCP  231 (520)
T ss_pred             ccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence            3445566999988777 6888987420                         1111    25788888889886 69999


Q ss_pred             ceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhH
Q 020393          108 RPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG  187 (326)
Q Consensus       108 ~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~  187 (326)
                      +|+.-.     .+.+||+++.+...                          +.|....     ..             +.
T Consensus       232 ePIlLk-----~hVLVM~FlGrdgw--------------------------~aPkLKd-----~~-------------ls  262 (520)
T KOG2270|consen  232 EPILLK-----NHVLVMEFLGRDGW--------------------------AAPKLKD-----AS-------------LS  262 (520)
T ss_pred             Cceeee-----cceEeeeeccCCCC--------------------------cCccccc-----cc-------------CC
Confidence            999876     67999999964321                          1110000     00             00


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEc-c-ccccCch-hhhhhh
Q 020393          188 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD-P-ACYYGHN-EAEFGM  262 (326)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID-~-~~~~G~~-~~Dla~  262 (326)
                                 .+...+....++..+..+.+    ...|||+||.--|+|+.+ |.+.||| . .+-..|| ..|+-.
T Consensus       263 -----------~~ka~~~Y~~~v~~MR~lY~----~c~LVHADLSEfN~Lyhd-G~lyiIDVSQSVE~DHP~aldFLR  324 (520)
T KOG2270|consen  263 -----------TSKARELYQQCVRIMRRLYQ----KCRLVHADLSEFNLLYHD-GKLYIIDVSQSVEHDHPHALDFLR  324 (520)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHH----HhceeccchhhhhheEEC-CEEEEEEccccccCCChhHHHHHH
Confidence                       00011222333333343332    468999999999999965 5699999 4 4557777 456654

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=97.65  E-value=0.00021  Score=64.48  Aligned_cols=75  Identities=17%  Similarity=0.083  Sum_probs=48.3

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.+|++...  +..+++|.....      ....+..|..+++.+..   -.+.+++..... .+..+++||
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e   81 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH---PFIIRLFWTEHD-QRFLYMLME   81 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC---CcHhhhHhhhcc-CCeEEEEEe
Confidence            566888999999999864  336888986421      12335567777666642   123444433222 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        82 ~~~~~~L   88 (291)
T cd05612          82 YVPGGEL   88 (291)
T ss_pred             CCCCCCH
Confidence            9998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=97.65  E-value=0.00044  Score=63.67  Aligned_cols=78  Identities=17%  Similarity=0.047  Sum_probs=51.7

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -.-++.++.|....+|++.... + .+.+|......    ...+..|.++++.+..   -.+.+++..... ++..+++|
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~   82 (331)
T cd06649           7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICM   82 (331)
T ss_pred             ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEe
Confidence            3446778999999999998753 3 57777765321    2346678777776643   234555544322 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        83 e~~~~~~L   90 (331)
T cd06649          83 EHMDGGSL   90 (331)
T ss_pred             ecCCCCcH
Confidence            99998765

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=97.65  E-value=0.00052  Score=60.25  Aligned_cols=75  Identities=17%  Similarity=0.054  Sum_probs=51.7

Q ss_pred             EeEeCCccccceEEEEeCCc--cEEEEecCCCCcch-----HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTDAG--SFFVKTNRSIGPSM-----FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~~~~-----~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|....||++.....  .|++|+........     ...|...++.+..   -.+++++..... ....+++|++
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~~v~~~   79 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH---PNIVQILDVFQD-DNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB---TTBCHEEEEEEE-SSEEEEEEEE
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc---cccccccccccc-cccccccccc
Confidence            56788899999999988654  69999987542111     1237778888842   235556655433 5688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        80 ~~~~~L   85 (260)
T PF00069_consen   80 CPGGSL   85 (260)
T ss_dssp             ETTEBH
T ss_pred             cccccc
Confidence            998643

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=97.64  E-value=0.00017  Score=66.34  Aligned_cols=74  Identities=9%  Similarity=0.036  Sum_probs=47.3

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++....  ..+.+|+....      ....+..|..++..+..+  -.++.++..... .+..++|||++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~lv~e~~   78 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN--PFLVGLHSCFQT-TSRLFLVIEYV   78 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCC--CCEeeEEEEEEe-CCEEEEEEeCC
Confidence            47788899999997643  36888887531      112345666666665433  234555543322 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        79 ~~~~L   83 (327)
T cd05617          79 NGGDL   83 (327)
T ss_pred             CCCcH
Confidence            98755

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.64  E-value=0.00027  Score=71.62  Aligned_cols=76  Identities=13%  Similarity=0.126  Sum_probs=49.8

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.++.|....||+....  +..+.+|+.....      ...+..|...+..+...   .+.+++..... .+..|+||
T Consensus         8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp---~Iv~~~~~~~~-~~~~~lVm   83 (669)
T cd05610           8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSP---FIVHLYYSLQS-ANNVYLVM   83 (669)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCC---CcCeEEEEEEE-CCEEEEEE
Confidence            3567888999999999875  3478889875421      13455677666655431   23444433322 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        84 Ey~~g~~L   91 (669)
T cd05610          84 EYLIGGDV   91 (669)
T ss_pred             eCCCCCCH
Confidence            99998755

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=97.64  E-value=0.00062  Score=59.95  Aligned_cols=75  Identities=20%  Similarity=0.155  Sum_probs=50.9

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .+.++.|..+.+|+....++ .+++|.....  ....+..|...++.+..   ..+++++..... ....+++||+++|.
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~~~   86 (261)
T cd05034          11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH---DKLVQLYAVCSE-EEPIYIVTEYMSKG   86 (261)
T ss_pred             eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCC---CCEeeeeeeeec-CCceEEEEeccCCC
Confidence            45678888899999876543 6888887643  23456678777777653   235555544332 46789999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        87 ~L   88 (261)
T cd05034          87 SL   88 (261)
T ss_pred             CH
Confidence            55

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=97.64  E-value=0.0005  Score=61.53  Aligned_cols=77  Identities=17%  Similarity=0.094  Sum_probs=51.6

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc---C-CCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P-TGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~-~~~~~~v~e  125 (326)
                      ++.++.|..+.+|++...  +..+++|.....  ....+..|..+++.+.++  -.+++++.....   . .+..+++||
T Consensus        23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~lv~e  100 (286)
T cd06638          23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH--PNVVKFYGMYYKKDVKNGDQLWLVLE  100 (286)
T ss_pred             eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC--CCeeeeeeeeeecccCCCCeEEEEEe
Confidence            456788888999998763  237888986542  124466788888888654  245555543211   1 356899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus       101 ~~~~~~L  107 (286)
T cd06638         101 LCNGGSV  107 (286)
T ss_pred             ecCCCCH
Confidence            9999765

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=97.63  E-value=0.00051  Score=66.80  Aligned_cols=75  Identities=16%  Similarity=-0.010  Sum_probs=48.3

Q ss_pred             EeEeCCccccceEEEEeC---CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD---AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~---~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.++.|....+|+....   ...+++|......   ...++.|..++..+..   -.+++++..... .+..|+||||+
T Consensus        72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H---pniv~~~~~~~~-~~~~~lv~E~~  147 (478)
T PTZ00267         72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH---FGIVKHFDDFKS-DDKLLLIMEYG  147 (478)
T ss_pred             EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEE-CCEEEEEEECC
Confidence            345677788889988653   2367788654322   2335567776665542   235666654433 57899999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus       148 ~gg~L  152 (478)
T PTZ00267        148 SGGDL  152 (478)
T ss_pred             CCCCH
Confidence            99866

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=97.63  E-value=0.00044  Score=60.81  Aligned_cols=74  Identities=19%  Similarity=0.150  Sum_probs=49.8

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .+.++.|..+.+|+....+..+++|..... ....+..|...++.+...   .+.+++....  .+..+++||+++|.++
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~---~i~~~~~~~~--~~~~~~v~e~~~~~~L   85 (254)
T cd05083          11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHK---NLVRLLGVIL--HNGLYIVMELMSKGNL   85 (254)
T ss_pred             eeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCC---CcCeEEEEEc--CCCcEEEEECCCCCCH
Confidence            456778888899998766678999988653 234466787777766432   2344443322  3457999999998755

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=97.63  E-value=0.00071  Score=59.73  Aligned_cols=78  Identities=21%  Similarity=0.148  Sum_probs=51.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ...-.+.++.|..+.+|++...++ .+++|......  ...+..|..+++.+...   .+.+++....  ....+++||+
T Consensus         7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~--~~~~~~v~e~   81 (260)
T cd05073           7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD---KLVKLHAVVT--KEPIYIITEF   81 (260)
T ss_pred             ceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCC---CcceEEEEEc--CCCeEEEEEe
Confidence            455567788899999999976544 68888775432  23466788888777532   1222222222  3578999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        82 ~~~~~L   87 (260)
T cd05073          82 MAKGSL   87 (260)
T ss_pred             CCCCcH
Confidence            998654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=97.62  E-value=0.00045  Score=62.16  Aligned_cols=73  Identities=12%  Similarity=0.068  Sum_probs=48.0

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|..+.||+....  +..+.+|.....    ....+..|..+++.+..   -.+.+++..... ++..+++||+
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~   84 (288)
T cd07871           9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH---ANIVTLHDIIHT-ERCLTLVFEY   84 (288)
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEeC
Confidence            3567888999999998764  336888876431    12345578888777743   234455544332 4578999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        85 ~~~   87 (288)
T cd07871          85 LDS   87 (288)
T ss_pred             CCc
Confidence            986

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=97.62  E-value=0.00024  Score=65.05  Aligned_cols=74  Identities=15%  Similarity=0.083  Sum_probs=44.3

Q ss_pred             EeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++...+ + .+++|.....      .......|..++..+..+  -.+++++..... .+..+++|||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~i~~~~~~~~~-~~~~~lv~e~~   78 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEH--PFLTHLFCTFQT-KEHLFFVMEYL   78 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence            46788999999997643 3 5888876431      112223344444433222  234555544332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        79 ~gg~L   83 (316)
T cd05592          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            98754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.62  E-value=0.00063  Score=60.02  Aligned_cols=74  Identities=23%  Similarity=0.235  Sum_probs=50.5

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.++.|..+.+|++...++ .+++|.....  ....+..|..+++.+...   .+.+++....  .+..+++|++++|.
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~--~~~~~~v~e~~~~~   85 (260)
T cd05067          11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP---RLVRLYAVVT--QEPIYIITEYMENG   85 (260)
T ss_pred             eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc---CeeeEEEEEc--cCCcEEEEEcCCCC
Confidence            46688899999999887554 7888977642  234566788888777532   2333443321  45789999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        86 ~L   87 (260)
T cd05067          86 SL   87 (260)
T ss_pred             CH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=97.62  E-value=0.00064  Score=62.35  Aligned_cols=73  Identities=12%  Similarity=-0.013  Sum_probs=44.9

Q ss_pred             EeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++... ++ .|++|+....   .   ...+..|..+++.+..   -.+.+++..... .+..+++|||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~   77 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH---PFLTALKYSFQT-HDRLCFVMEYA   77 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCCCEEEEEEc-CCEEEEEEeCC
Confidence            4677889999998763 33 6888976531   1   1223456666655532   123444433222 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        78 ~~~~L   82 (323)
T cd05571          78 NGGEL   82 (323)
T ss_pred             CCCcH
Confidence            98654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=97.61  E-value=0.0012  Score=57.84  Aligned_cols=74  Identities=19%  Similarity=0.100  Sum_probs=51.3

Q ss_pred             eEeCCccccceEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           55 CPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +.++.|..+.+|+....+      ..+++|......    ...+..|...++.+. +  -.+.+++..... .+..+++|
T Consensus         5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~--~~i~~~~~~~~~-~~~~~~i~   80 (258)
T smart00219        5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD-H--PNIVKLLGVCTE-EEPLMIVM   80 (258)
T ss_pred             ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC-C--CchheEEEEEcC-CCeeEEEE
Confidence            567888889999988754      468889886532    335667888887773 2  235555554433 46899999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ++.+|.++
T Consensus        81 e~~~~~~l   88 (258)
T smart00219       81 EYMEGGDL   88 (258)
T ss_pred             eccCCCCH
Confidence            99998654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=97.61  E-value=0.00037  Score=63.97  Aligned_cols=76  Identities=12%  Similarity=0.047  Sum_probs=47.3

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ...++.|..+.||++... ++ .|.+|+....      ....+..|..++..+...  -.++.++..... .+..|+|||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~i~~~~~~~~~-~~~~~lv~E   81 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP--PFLTQLHSCFQT-VDRLYFVME   81 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC--CchhheeeEEec-CCEEEEEEc
Confidence            456788999999998764 33 6888986531      112234566655544332  234555443322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        82 y~~~g~L   88 (323)
T cd05615          82 YVNGGDL   88 (323)
T ss_pred             CCCCCcH
Confidence            9998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=97.60  E-value=0.00028  Score=65.07  Aligned_cols=75  Identities=13%  Similarity=0.014  Sum_probs=45.7

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||++....  ..+++|+....      ....+..|..++..+..   -.++.++..... .+..|++||
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~l~~~~~~-~~~~~lv~E   81 (331)
T cd05624           6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC---QWITTLHYAFQD-ENYLYLVMD   81 (331)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCEEEEEEe
Confidence            5678889999999987643  36888876431      11223445554443321   123444433322 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+.+
T Consensus        82 y~~gg~L   88 (331)
T cd05624          82 YYVGGDL   88 (331)
T ss_pred             CCCCCcH
Confidence            9999765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=97.60  E-value=0.00094  Score=58.42  Aligned_cols=73  Identities=25%  Similarity=0.136  Sum_probs=47.8

Q ss_pred             EeCCccccceEEEEeCC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           56 PVGGGCINLASRYGTDA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .++.|..+.+|++...+ ..+++|......    ...+..|..+++.+..   -.+++++..... .+..+++||+++|.
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~~~~   77 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH---PNIVKLIGVCVQ-KQPIYIVMELVPGG   77 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeEEEEEEEec-CCCeEEEEEcCCCC
Confidence            46778888999998754 478889876432    2245567776666542   124444444332 46789999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        78 ~l   79 (251)
T cd05041          78 SL   79 (251)
T ss_pred             cH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=97.59  E-value=0.00062  Score=62.49  Aligned_cols=73  Identities=12%  Similarity=-0.036  Sum_probs=45.6

Q ss_pred             EeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++... + ..+++|.....      ....+..|..+++.+..   -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~E~~   77 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVMEYA   77 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC---CCCcceeeEEec-CCEEEEEEeCC
Confidence            4677888999998763 3 36888987531      11223456666665542   124444433322 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        78 ~~~~L   82 (323)
T cd05595          78 NGGEL   82 (323)
T ss_pred             CCCcH
Confidence            98754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=97.58  E-value=0.00069  Score=60.83  Aligned_cols=76  Identities=11%  Similarity=0.000  Sum_probs=48.0

Q ss_pred             EeEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           54 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      .+.++.|..+.+|++...    + ..+++|.....       ....+..|..+++.+..+  -.++.++..... ++..+
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~   81 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-DTKLH   81 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC--CChhceeeEeec-CCeEE
Confidence            456788888999998752    3 36888877531       113345677777777543  234444433222 45778


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|..+
T Consensus        82 lv~e~~~~~~L   92 (290)
T cd05613          82 LILDYINGGEL   92 (290)
T ss_pred             EEEecCCCCcH
Confidence            99999998654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.58  E-value=0.00044  Score=61.00  Aligned_cols=74  Identities=22%  Similarity=0.213  Sum_probs=49.1

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.++.|..+.+|++...++ .+++|.....  ....+..|..+++.+...   .+.+++....  ++..+++|++++|.
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~---~i~~~~~~~~--~~~~~lv~e~~~~~   85 (260)
T cd05070          11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD---KLVQLYAVVS--EEPIYIVTEYMSKG   85 (260)
T ss_pred             hheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCC---ceEEEEeEEC--CCCcEEEEEecCCC
Confidence            35678888899999976554 7888877642  234567788888877532   2223332221  45679999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        86 ~L   87 (260)
T cd05070          86 SL   87 (260)
T ss_pred             cH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=97.57  E-value=0.00088  Score=61.65  Aligned_cols=73  Identities=11%  Similarity=-0.031  Sum_probs=45.1

Q ss_pred             EeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++... + ..+++|+....      ....+..|..+++.+..   -.+++++..... .+..++||||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~Ey~   77 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH---PFLTSLKYSFQT-KDRLCFVMEYV   77 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCCcceEEEEEc-CCEEEEEEeCC
Confidence            4677888999998764 2 36888987531      11234456666655532   123444433322 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        78 ~~g~L   82 (328)
T cd05593          78 NGGEL   82 (328)
T ss_pred             CCCCH
Confidence            98654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=97.57  E-value=0.0004  Score=63.94  Aligned_cols=74  Identities=8%  Similarity=0.016  Sum_probs=46.2

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++....  ..+.+|+....   .   ...+..|..++..+..+  -.+++++..... .+..+++|||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~   78 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFFVIEYV   78 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC--CcCCceeeEEEe-CCEEEEEEeCC
Confidence            46788899999997643  36888886531   1   12244566655555333  234455544332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        79 ~~~~L   83 (329)
T cd05618          79 NGGDL   83 (329)
T ss_pred             CCCCH
Confidence            98754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=97.56  E-value=0.00074  Score=61.36  Aligned_cols=74  Identities=12%  Similarity=0.079  Sum_probs=48.1

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|..+.+|+.+..  +..+++|.....    ....+..|...++.+..   -.+.+++..... ++..+++||
T Consensus         9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e   84 (309)
T cd07872           9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIVHT-DKSLTLVFE   84 (309)
T ss_pred             EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC---CCcceEEEEEee-CCeEEEEEe
Confidence            44677888999999998764  336888876431    12234568777777643   234445544332 568899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      |+++
T Consensus        85 ~~~~   88 (309)
T cd07872          85 YLDK   88 (309)
T ss_pred             CCCC
Confidence            9875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=97.56  E-value=0.00065  Score=61.56  Aligned_cols=73  Identities=14%  Similarity=0.065  Sum_probs=47.9

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|..+.||++...  +..+++|+....    .......|..+++.+...   .+.+++..... ....+++|||
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~-~~~~~lv~e~   84 (303)
T cd07869           9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHA---NIVLLHDIIHT-KETLTLVFEY   84 (303)
T ss_pred             EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCC---CcCeEEEEEec-CCeEEEEEEC
Confidence            4577888999999999864  337888987532    122345688777776432   23444443322 4678999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        85 ~~~   87 (303)
T cd07869          85 VHT   87 (303)
T ss_pred             CCc
Confidence            976

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=97.55  E-value=0.00058  Score=62.65  Aligned_cols=27  Identities=30%  Similarity=0.272  Sum_probs=24.0

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.|||++.++...|+|+.
T Consensus       115 ~giiHrDlkp~Nili~~~~~~kl~DfG  141 (325)
T cd05602         115 LNIVYRDLKPENILLDSQGHIVLTDFG  141 (325)
T ss_pred             CCeEecCCCHHHeEECCCCCEEEccCC
Confidence            479999999999999988878899974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=97.55  E-value=0.00063  Score=70.28  Aligned_cols=75  Identities=16%  Similarity=0.044  Sum_probs=49.8

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.||+....  +..+++|..+..   .   ...+..|.+++..+..   -.+++++..... .+..+++||
T Consensus         7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H---PNIVkl~~v~~d-~~~lyLVME   82 (932)
T PRK13184          7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH---PGIVPVYSICSD-GDPVYYTMP   82 (932)
T ss_pred             EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC---cCcCeEEEEEee-CCEEEEEEE
Confidence            456888899999998764  337888987532   1   1235567777766643   234455544332 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        83 Y~eGGSL   89 (932)
T PRK13184         83 YIEGYTL   89 (932)
T ss_pred             cCCCCCH
Confidence            9999765

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=97.55  E-value=0.00025  Score=64.69  Aligned_cols=72  Identities=15%  Similarity=0.067  Sum_probs=43.5

Q ss_pred             eCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++...+  ..+.+|.....      ....+..|..++..+..  + .+.+++..... .+..+++|||++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~-~~~~~lv~e~~~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC--P-FIVPLKFSFQS-PEKLYLVLAFIN   76 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC--C-cEeceeeEEec-CCeEEEEEcCCC
Confidence            4668888999987643  36888876421      11234456666666532  1 22333332222 468899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        77 ~g~L   80 (312)
T cd05585          77 GGEL   80 (312)
T ss_pred             CCcH
Confidence            8754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=97.55  E-value=0.00087  Score=61.84  Aligned_cols=76  Identities=18%  Similarity=0.052  Sum_probs=50.4

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|..+.+|+.... ++ .+++|+.... .   ...+..|.++++.+..   -.+.+++..... ++..+++|||
T Consensus         9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   84 (333)
T cd06650           9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICMEH   84 (333)
T ss_pred             eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC---CcccceeEEEEE-CCEEEEEEec
Confidence            3566888889999998764 33 5666765432 1   2345678888777753   235555544333 5689999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        85 ~~~~~L   90 (333)
T cd06650          85 MDGGSL   90 (333)
T ss_pred             CCCCcH
Confidence            998765

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.54  E-value=0.00016  Score=66.64  Aligned_cols=73  Identities=15%  Similarity=0.125  Sum_probs=48.6

Q ss_pred             EeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           56 PVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++|.|.+..||+-.... + .+.+|.-...     ..+.+..|..+|+.|..   -.+-+++..... ++..|+||||+.
T Consensus        17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H---~nIV~l~d~~~~-~~~i~lVMEyC~   92 (429)
T KOG0595|consen   17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH---PNIVRLLDCIED-DDFIYLVMEYCN   92 (429)
T ss_pred             hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC---cceeeEEEEEec-CCeEEEEEEeCC
Confidence            38999999999976543 3 5666655432     23456788888887763   123344433332 578999999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus        93 gGDL   96 (429)
T KOG0595|consen   93 GGDL   96 (429)
T ss_pred             CCCH
Confidence            9876

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=97.53  E-value=0.00063  Score=59.90  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=49.6

Q ss_pred             eEeEeCCccccceEEEEeCC-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           53 KICPVGGGCINLASRYGTDA-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      -.+.++.|..+.+|++...+ +.+++|.....  ....+..|.+.++.+..   -.+++++..... .+..+++||+++|
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~   83 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH---PNLVQLYGVCTK-QRPIFIVTEYMAN   83 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEEEEEEEEcC-CCceEEEEecCCC
Confidence            34557778888999987644 37899987542  22345567777776642   124455544332 4678999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      ..+
T Consensus        84 ~~L   86 (256)
T cd05059          84 GCL   86 (256)
T ss_pred             CCH
Confidence            755

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=97.52  E-value=0.0013  Score=59.58  Aligned_cols=75  Identities=16%  Similarity=0.156  Sum_probs=48.3

Q ss_pred             eEeCCccccceEEEEeC-Cc-c--EEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           55 CPVGGGCINLASRYGTD-AG-S--FFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~--~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +.++.|..+.+|++... ++ .  +.+|..... .   ...+..|.+.+..+..+  -.+++++..... ++..|++|||
T Consensus        13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h--~~iv~~~~~~~~-~~~~~lv~e~   89 (303)
T cd05088          13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIEY   89 (303)
T ss_pred             eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC--CCcceEEEEECC-CCCceEEEEe
Confidence            45788889999999753 23 2  344544321 1   22356688888777543  235666655433 5689999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        90 ~~~~~L   95 (303)
T cd05088          90 APHGNL   95 (303)
T ss_pred             CCCCcH
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=97.52  E-value=0.0017  Score=58.79  Aligned_cols=77  Identities=18%  Similarity=0.046  Sum_probs=48.7

Q ss_pred             eeEeEeCCccccceEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcce
Q 020393           52 TKICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRP  109 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~  109 (326)
                      .-.+.++.|....||++...+                 + .+.+|......    ...+..|...+..+..   -.+.++
T Consensus         8 ~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~   84 (304)
T cd05096           8 LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD---PNIIRL   84 (304)
T ss_pred             eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC---CCeeEE
Confidence            334568889999999986422                 1 47888775421    2335567777766642   234445


Q ss_pred             eeecccCCCceEEEEeeecCCCC
Q 020393          110 FKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       110 ~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +..... .+..+++|||++|.++
T Consensus        85 ~~~~~~-~~~~~lv~e~~~~~~L  106 (304)
T cd05096          85 LGVCVD-EDPLCMITEYMENGDL  106 (304)
T ss_pred             EEEEec-CCceEEEEecCCCCcH
Confidence            544332 4678999999998754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=97.51  E-value=0.00038  Score=63.73  Aligned_cols=74  Identities=12%  Similarity=0.024  Sum_probs=47.6

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++....  ..|++|+....      ....+..|..+++.+..+  -.+++++..... .+..+++|||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~   78 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH--PFLTQLHSCFQT-KDRLFFVMEYV   78 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCC--CCccceeeEEEc-CCEEEEEEcCC
Confidence            36778889999997643  37888977531      122344566666665433  245556554332 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        79 ~~~~L   83 (318)
T cd05570          79 NGGDL   83 (318)
T ss_pred             CCCCH
Confidence            98754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=97.51  E-value=0.0014  Score=57.64  Aligned_cols=75  Identities=17%  Similarity=0.111  Sum_probs=51.2

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCC
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS  131 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~  131 (326)
                      .+.++.|..+.+|+....+..+++|......  ...+..|..+++.+...   .+.+++..... .+..+++||+.+|.+
T Consensus        11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~~v~e~~~~~~   86 (256)
T cd05039          11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP---NLVQLLGVVLQ-GNPLYIVTEYMAKGS   86 (256)
T ss_pred             eeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc---ceeeeEEEEcC-CCCeEEEEEecCCCc
Confidence            4557888889999998877789999987532  23456677777776532   23344433322 468899999999765


Q ss_pred             C
Q 020393          132 S  132 (326)
Q Consensus       132 ~  132 (326)
                      +
T Consensus        87 L   87 (256)
T cd05039          87 L   87 (256)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=97.51  E-value=0.0014  Score=57.62  Aligned_cols=75  Identities=21%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.++.|..+.+|++...  +..|++|.....    ....+..|...++.+...   .+++++..... .+..+++|+++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~~   80 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHP---NIVAFKESFEA-DGHLYIVMEYC   80 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCC---CcceEEEEEEE-CCEEEEEEeeC
Confidence            466888888999998764  347999986431    123355677766666432   34555544332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        81 ~~~~l   85 (255)
T cd08219          81 DGGDL   85 (255)
T ss_pred             CCCcH
Confidence            98653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=97.50  E-value=0.0018  Score=56.12  Aligned_cols=75  Identities=15%  Similarity=0.073  Sum_probs=50.8

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .+.++.|....+|++...  +..+++|......   ...+..|.+.++.+..   -.+++++..... ++..++++++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~   80 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH---PNIVKYYGSYLK-KDELWIVMEFCS   80 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEEecCC
Confidence            356778888899999875  3378999886532   2345667776666652   245555554332 468899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        81 ~~~L   84 (253)
T cd05122          81 GGSL   84 (253)
T ss_pred             CCcH
Confidence            8654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=97.50  E-value=0.00088  Score=61.33  Aligned_cols=27  Identities=30%  Similarity=0.294  Sum_probs=24.2

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||+++.++...|+|+.
T Consensus       115 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg  141 (321)
T cd05603         115 LNIIYRDLKPENILLDSQGHVVLTDFG  141 (321)
T ss_pred             CCeEeccCCHHHeEECCCCCEEEccCC
Confidence            479999999999999988888999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=97.50  E-value=0.00088  Score=60.26  Aligned_cols=75  Identities=13%  Similarity=0.072  Sum_probs=48.7

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|....+|++...  +..+++|.....      ....+..|.+.++.+..   -.+++++..... .+..+++||
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   81 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH---PFLVNLYGSFQD-DSNLYLVME   81 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC---CCccceeeEEEc-CCeEEEEEe
Confidence            466788888999998764  347888876531      12335567777766652   234555544332 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        82 ~~~~~~L   88 (290)
T cd05580          82 YVPGGEL   88 (290)
T ss_pred             cCCCCCH
Confidence            9988654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=97.50  E-value=0.0012  Score=59.05  Aligned_cols=78  Identities=21%  Similarity=0.202  Sum_probs=48.9

Q ss_pred             eeEeEeCCccccceEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCce
Q 020393           52 TKICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~  120 (326)
                      ..++.++.|..+.+|+....      +..+++|......    ...+..|..+++.+...   .+++.+...... ....
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE---NIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCC---CeeeeeeEEecCCCCce
Confidence            34566888889999988632      2368889875421    23456777777766431   233343332221 2467


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus        84 ~lv~e~~~g~~L   95 (284)
T cd05079          84 KLIMEFLPSGSL   95 (284)
T ss_pred             EEEEEccCCCCH
Confidence            999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=97.49  E-value=0.00046  Score=63.59  Aligned_cols=76  Identities=13%  Similarity=0.042  Sum_probs=46.5

Q ss_pred             eEeEeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.++.|..+.||++....  ..+.+|+....      ....+..|..++..+..   -.++.++..... .+..++||
T Consensus         5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~   80 (332)
T cd05623           5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN---QWITTLHYAFQD-ENNLYLVM   80 (332)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCEEEEEE
Confidence            35678889999999987643  36888886421      11224455555444322   223444433322 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|+++
T Consensus        81 ey~~~g~L   88 (332)
T cd05623          81 DYYVGGDL   88 (332)
T ss_pred             eccCCCcH
Confidence            99998755

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=97.48  E-value=0.0015  Score=60.97  Aligned_cols=73  Identities=19%  Similarity=0.197  Sum_probs=50.4

Q ss_pred             eCCccccceEEEEeCCcc-EEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           57 VGGGCINLASRYGTDAGS-FFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~~-~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.|....||+....+.. +.+|+.....     ...+..|+.+|..|+.-   .|-+++++...+.+...+||||++|+
T Consensus        49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~Hp---NIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHP---NIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             cccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCC---CeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            788899999998877666 7778776422     23688899888887541   23335554433122579999999998


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      .+
T Consensus       126 sL  127 (362)
T KOG0192|consen  126 SL  127 (362)
T ss_pred             cH
Confidence            65

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=97.48  E-value=0.0017  Score=57.87  Aligned_cols=77  Identities=25%  Similarity=0.183  Sum_probs=49.4

Q ss_pred             eEeEeCCccccceEEEEeC------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceE
Q 020393           53 KICPVGGGCINLASRYGTD------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~  121 (326)
                      -++.++.|..+.+|++...      ...+++|......    ...+..|...++.+..   -.+++++...... ....+
T Consensus         8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~---~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH---ENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC---CChheEEeeeecCCCCceE
Confidence            3466788888999998753      2368899876532    2346677776666632   1344554433221 34689


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|.++
T Consensus        85 lv~e~~~~~~l   95 (284)
T cd05038          85 LIMEYLPSGSL   95 (284)
T ss_pred             EEEecCCCCCH
Confidence            99999988755

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=97.47  E-value=0.0016  Score=56.88  Aligned_cols=73  Identities=19%  Similarity=0.164  Sum_probs=49.8

Q ss_pred             EeCCccccceEEEEeC-----CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGTD-----AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~-----~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.|....+|++...     ...+++|......    ...+..|.+.++.+. +  ..+++++..... .+..+++||+
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~--~~i~~~~~~~~~-~~~~~lv~e~   77 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-H--PNVVRLLGVCTE-EEPLYLVLEY   77 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-C--CChheeeeeecC-CCceEEEEEe
Confidence            4677888899998875     3478999886532    234567777777775 2  234455544332 5688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      .+|.++
T Consensus        78 ~~~~~L   83 (262)
T cd00192          78 MEGGDL   83 (262)
T ss_pred             ccCCcH
Confidence            998765

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=97.47  E-value=0.0031  Score=57.02  Aligned_cols=79  Identities=11%  Similarity=0.080  Sum_probs=49.7

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +-.-++.++.|..+.+|+....  +..+.+|......   ...+..|..+++.+..   -.+.+++..... ....+++|
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~v~~~~~~~~~-~~~~~lv~   96 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PNIVNYLDSYLV-GDELWVVM   96 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC---CCEeeEEEEEEe-CCEEEEee
Confidence            3455667888989999998753  3478888765321   2345567776665532   234444433222 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        97 e~~~~~~L  104 (296)
T cd06654          97 EYLAGGSL  104 (296)
T ss_pred             cccCCCCH
Confidence            99998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=97.47  E-value=0.00076  Score=61.90  Aligned_cols=27  Identities=30%  Similarity=0.278  Sum_probs=24.2

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.|||++.++...|+|+.
T Consensus       115 ~givH~Dlkp~NIll~~~~~~kL~DfG  141 (325)
T cd05604         115 INIVYRDLKPENILLDSQGHVVLTDFG  141 (325)
T ss_pred             CCeeecCCCHHHeEECCCCCEEEeecC
Confidence            479999999999999988888899974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=97.45  E-value=0.0009  Score=61.24  Aligned_cols=74  Identities=14%  Similarity=0.068  Sum_probs=45.1

Q ss_pred             EeCCccccceEEEEeCC--ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDA--GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||++...+  ..+++|.....      .......|..++..+..+  -.+++++..... .+..+++|||+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~ey~   78 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHLYCTFQT-KENLFFVMEYL   78 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC--CcCcceEEEEEe-CCEEEEEEeCC
Confidence            46788889999998643  36888976431      112233455555443232  224445544332 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        79 ~~g~L   83 (316)
T cd05619          79 NGGDL   83 (316)
T ss_pred             CCCcH
Confidence            98755

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=97.45  E-value=0.00037  Score=62.48  Aligned_cols=77  Identities=13%  Similarity=0.137  Sum_probs=51.0

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .....++.|....+|++...  +..+++|......  ...+..|.+.++.+..   ..+++++..... ++..++++|++
T Consensus        22 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~   97 (286)
T cd06614          22 KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH---PNIVDYYDSYLV-GDELWVVMEYM   97 (286)
T ss_pred             hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC---CCeeEEEEEEEE-CCEEEEEEecc
Confidence            33456788888889998775  4578999876432  3345667777766643   234555543322 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        98 ~~~~L  102 (286)
T cd06614          98 DGGSL  102 (286)
T ss_pred             CCCcH
Confidence            98655

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.45  E-value=0.00037  Score=66.60  Aligned_cols=73  Identities=12%  Similarity=0.085  Sum_probs=49.6

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEe-cC----CCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKT-NR----SIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~-~~----~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.+|-|.++.||+|...+. -|.+|. .-    .....-+..|...|..|..+  ..|-++|-+.-. ++.-|+|||
T Consensus       364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~--~~IIqL~DYEv~-d~~lYmvmE  440 (677)
T KOG0596|consen  364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH--DKIIQLYDYEVT-DGYLYMVME  440 (677)
T ss_pred             hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC--ceEEEEeeeecc-CceEEEEee
Confidence            3455578888999999986543 444443 22    11234478899999999875  566667755443 789999999


Q ss_pred             ee
Q 020393          126 FI  127 (326)
Q Consensus       126 ~l  127 (326)
                      +=
T Consensus       441 ~G  442 (677)
T KOG0596|consen  441 CG  442 (677)
T ss_pred             cc
Confidence            74

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=97.43  E-value=0.00057  Score=61.25  Aligned_cols=72  Identities=11%  Similarity=-0.067  Sum_probs=44.3

Q ss_pred             eCCccccceEEEEeC-C-ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD-A-GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++... + ..+++|.....   .   ...+..|.++++.+...   .+.++...... .+..+++||+++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e~~~   76 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSR---FIVSLAYAFQT-KTDLCLVMTIMN   76 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCC---cEeeeeEEEcC-CCeEEEEEeCCC
Confidence            467888999998763 3 36888876531   1   12344577777766431   23333332222 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        77 ~g~L   80 (280)
T cd05608          77 GGDL   80 (280)
T ss_pred             CCCH
Confidence            8765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=97.43  E-value=0.0023  Score=56.57  Aligned_cols=78  Identities=23%  Similarity=0.157  Sum_probs=50.0

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ..-...++.|....+|+....  +..+++|......  ...+..|.+.++.+..   -.+.+++..... ++..+++|||
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   83 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITEF   83 (263)
T ss_pred             eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC---CChhheEEEEcC-CCCcEEEEEe
Confidence            334456788888899997754  3478889876432  2345567777777643   123334433222 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      .+|.++
T Consensus        84 ~~~~~L   89 (263)
T cd05052          84 MTYGNL   89 (263)
T ss_pred             CCCCcH
Confidence            998755

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PRK10345 hypothetical protein; Provisional

Probab=97.43  E-value=0.0011  Score=57.17  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=47.9

Q ss_pred             eeeEeEeCCccccceEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcC--CCCCcceeeecccCCC--ceE-E
Q 020393           51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETR--TIRAPRPFKVGALPTG--GSY-I  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~--~~~vP~~~~~~~~~~~--~~~-~  122 (326)
                      ..+.+.++.|....||. ...++..++|+....   ....+..|...++.|....  --.+++++..-.+..|  ..+ +
T Consensus         4 L~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cCCcceecCCCceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            34567889999999996 334555688876532   2345788999999986421  1247777766544322  323 5


Q ss_pred             EEee
Q 020393          123 IMEF  126 (326)
Q Consensus       123 v~e~  126 (326)
                      |+++
T Consensus        83 I~e~   86 (210)
T PRK10345         83 IADF   86 (210)
T ss_pred             EecC
Confidence            6787

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=97.42  E-value=0.0021  Score=56.69  Aligned_cols=77  Identities=16%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +-.+.++.|..+.+|.....++ .+.+|......  ...+..|...++.+..   -.+++++..... .+..+++||+++
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   82 (256)
T cd05113           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH---EKLVQLYGVCTK-QRPIYIVTEYMS   82 (256)
T ss_pred             EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC---CCeeeEEEEEcc-CCCcEEEEEcCC
Confidence            3456788888899999876544 58888765422  2345567776666542   235555554432 456799999998


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        83 ~~~l   86 (256)
T cd05113          83 NGCL   86 (256)
T ss_pred             CCcH
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=97.42  E-value=0.0017  Score=60.03  Aligned_cols=80  Identities=18%  Similarity=0.179  Sum_probs=50.7

Q ss_pred             eeeEeEeCCccccceEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-.+.++.|....||+...      .+ ..+.+|+.....    ...+..|..++..+..+  -.+.+++.......+.
T Consensus         9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~~~~~~~~~~~~   86 (343)
T cd05103           9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGGP   86 (343)
T ss_pred             hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC--ccHhhhcceeecCCCc
Confidence            33456688899999999862      12 268888875421    12355688888777543  2345555433222356


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++|||++|.++
T Consensus        87 ~~lv~ey~~~g~L   99 (343)
T cd05103          87 LMVIVEFCKFGNL   99 (343)
T ss_pred             eEEEEeccCCCcH
Confidence            7899999999765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=97.41  E-value=0.00094  Score=59.90  Aligned_cols=76  Identities=12%  Similarity=0.001  Sum_probs=47.9

Q ss_pred             EeEeCCccccceEEEEeC----C-ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           54 ICPVGGGCINLASRYGTD----A-GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~----~-~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      .+.++.|..+.+|++...    + ..+.+|.....       ....+..|.+++..+..+  -.++.++..... .+..+
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~~~~~~~~-~~~~~   81 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC--PFLVTLHYAFQT-DTKLH   81 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC--cchhhhheeeec-CCEEE
Confidence            456888889999998742    2 25888876431       123355678777777543  223334333222 45788


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++|||++|.++
T Consensus        82 lv~e~~~~~~L   92 (288)
T cd05583          82 LILDYVNGGEL   92 (288)
T ss_pred             EEEecCCCCcH
Confidence            99999998654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=97.41  E-value=0.00067  Score=62.34  Aligned_cols=27  Identities=26%  Similarity=0.193  Sum_probs=24.1

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.|||++.++...|+|+.
T Consensus       115 ~~ivHrDlkp~Nili~~~~~~kl~Dfg  141 (330)
T cd05586         115 YDIVYRDLKPENILLDATGHIALCDFG  141 (330)
T ss_pred             CCeEeccCCHHHeEECCCCCEEEecCC
Confidence            379999999999999988888899974

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=97.41  E-value=0.0023  Score=55.86  Aligned_cols=75  Identities=15%  Similarity=0.084  Sum_probs=48.3

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|....+|++...  +..+++|.....     ....+..|.++++.+..   ..+.+++..... .+..++++|+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~~~~~~~~-~~~~~lv~e~   80 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH---PNIIKYYESFEE-KGKLCIVMEY   80 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC---CChhheEEEEec-CCEEEEEEEe
Confidence            455777888899999875  447899987542     12335567776666652   123444433222 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        81 ~~~~~L   86 (258)
T cd08215          81 ADGGDL   86 (258)
T ss_pred             cCCCcH
Confidence            998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=97.41  E-value=0.0011  Score=60.76  Aligned_cols=27  Identities=30%  Similarity=0.294  Sum_probs=24.1

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.|||++.++...|+|+.
T Consensus       115 ~givH~dikp~NIll~~~~~~kl~Dfg  141 (323)
T cd05575         115 LNIIYRDLKPENILLDSQGHVVLTDFG  141 (323)
T ss_pred             CCeEeCCCCHHHeEECCCCcEEEeccC
Confidence            369999999999999988888899974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=97.40  E-value=0.0018  Score=56.76  Aligned_cols=74  Identities=18%  Similarity=0.106  Sum_probs=46.3

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..++.|....+|+++..  +..+++|.....     ....+..|.+.++.+..   -.+.+++..... .+..+++|||.
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~   81 (256)
T cd08529           6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS---SYIIRYYESFLD-KGKLNIVMEYA   81 (256)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC---CCeehheeeecc-CCEEEEEEEeC
Confidence            45777888899999764  337888876431     12334456666665542   223444433322 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        82 ~~~~L   86 (256)
T cd08529          82 ENGDL   86 (256)
T ss_pred             CCCcH
Confidence            98754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=97.39  E-value=0.0036  Score=54.86  Aligned_cols=76  Identities=21%  Similarity=0.111  Sum_probs=44.7

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|....+|++....  ..+++|......     ...+..|.+.++.+..   ..+.+++......++..+++||+
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH---PNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC---CCeeeeeeeecCCCCEEEEEecc
Confidence            3456778888999987643  368888764321     1234556666655532   12333332221113467899999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        82 ~~~~~l   87 (257)
T cd08223          82 CEGGDL   87 (257)
T ss_pred             cCCCcH
Confidence            998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=97.38  E-value=0.0012  Score=62.01  Aligned_cols=80  Identities=13%  Similarity=0.063  Sum_probs=52.6

Q ss_pred             eeeEeEeCCccccceEEEEe---CC----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGT---DA----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~---~~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-.+.++.|..+.||++..   .+    ..+.+|......    ...+..|.++++.+..+  -.+++++..... .+.
T Consensus        40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h--~nIv~~~~~~~~-~~~  116 (374)
T cd05106          40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH--KNIVNLLGACTH-GGP  116 (374)
T ss_pred             ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC--CceeeEeeEecC-CCC
Confidence            33456688888999998763   11    158888775321    23456788888877443  235566654432 468


Q ss_pred             eEEEEeeecCCCCC
Q 020393          120 SYIIMEFIEFGSSR  133 (326)
Q Consensus       120 ~~~v~e~l~G~~~~  133 (326)
                      .+++|||++|+++.
T Consensus       117 ~~lv~ey~~~g~L~  130 (374)
T cd05106         117 VLVITEYCCYGDLL  130 (374)
T ss_pred             eEEeHhhccCCcHH
Confidence            89999999998763

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=97.38  E-value=0.005  Score=55.62  Aligned_cols=79  Identities=13%  Similarity=0.105  Sum_probs=50.5

Q ss_pred             ceeeEeEeCCccccceEEEEe--CCccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGT--DAGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-.-++.++.|..+.+|+...  ++..+++|......   ...+..|...++.+...   .+++++..... ....++++
T Consensus        20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~   95 (296)
T cd06655          20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP---NIVNFLDSFLV-GDELFVVM   95 (296)
T ss_pred             eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCC---ceeeeeeeEec-CceEEEEE
Confidence            345567788888899999864  23478888765321   23455677777666432   23444433222 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        96 e~~~~~~L  103 (296)
T cd06655          96 EYLAGGSL  103 (296)
T ss_pred             EecCCCcH
Confidence            99998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=97.38  E-value=0.0015  Score=61.44  Aligned_cols=185  Identities=16%  Similarity=0.118  Sum_probs=104.2

Q ss_pred             eCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeee---cccC---CCceEEEEeeecCC
Q 020393           57 VGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV---GALP---TGGSYIIMEFIEFG  130 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~---~~~~~~v~e~l~G~  130 (326)
                      ++.|-...||+-...+..+-||+++..+.+.+..|.++.+..    +...+.++.+   +...   ....|+|+++=+-+
T Consensus       218 i~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp----~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kG  293 (534)
T KOG3653|consen  218 IGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLP----GMKHENILQFIGAEKRGTADRMEYWLVTEFHPKG  293 (534)
T ss_pred             hhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhcc----CccchhHHHhhchhccCCccccceeEEeeeccCC
Confidence            467888999998888888999999876667788888877644    2233444332   2111   23678888887654


Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHH
Q 020393          131 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLM  210 (326)
Q Consensus       131 ~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~  210 (326)
                      ++.       +.| +-|.                          -+|.+.-   ++..-+..            =+.-|-
T Consensus       294 sL~-------dyL-~~nt--------------------------isw~~~c---ria~Smar------------GLa~LH  324 (534)
T KOG3653|consen  294 SLC-------DYL-KANT--------------------------ISWNSLC---RIAESMAR------------GLAHLH  324 (534)
T ss_pred             cHH-------HHH-Hhcc--------------------------ccHHHHH---HHHHHHHH------------HHHHhc
Confidence            331       111 1111                          1232211   12111100            001111


Q ss_pred             HHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cc---cCchhhhhhh-hh-hcCCChHhHHHhhhhCCCCc
Q 020393          211 KNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CY---YGHNEAEFGM-SW-CAGFGGSFYNSYFEVMPKQP  284 (326)
Q Consensus       211 ~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~---~G~~~~Dla~-~~-~~~~~~~fl~~Y~~~~~l~~  284 (326)
                      +.++  ..+ ..+|.++|.||+..|||+..|....|-||. +.   .|-+.-|.+. +- ..-+.++.+++=-....  +
T Consensus       325 ee~p--~~d-~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d--~  399 (534)
T KOG3653|consen  325 EELP--RGD-HHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQD--R  399 (534)
T ss_pred             ccCC--cCC-CCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccccc--H
Confidence            1122  111 468999999999999999888767888874 32   4555555542 11 11244677776543322  4


Q ss_pred             CHHHHHHHHHHHHHH
Q 020393          285 GFEKRRDLYMLYHYL  299 (326)
Q Consensus       285 ~~~~r~~~y~l~~~l  299 (326)
                      +--.|+++|.+...+
T Consensus       400 ~Afkr~DvYamgLVL  414 (534)
T KOG3653|consen  400 DAFKRIDVYAMGLVL  414 (534)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            445789999865433

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=97.37  E-value=0.0021  Score=56.66  Aligned_cols=75  Identities=11%  Similarity=-0.032  Sum_probs=48.1

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|..+.+|++... + ..+++|.....      ....+..|.++++.+..   ..+++++..... .+..+++||
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   82 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH---PNVIKYLASFIE-NNELNIVLE   82 (267)
T ss_pred             eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC---CCeeeeeeeeec-CCeEEEEEe
Confidence            345788888999998875 3 36888866421      12345667777776643   234444443322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        83 ~~~~~~L   89 (267)
T cd08224          83 LADAGDL   89 (267)
T ss_pred             cCCCCCH
Confidence            9998755

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=97.37  E-value=0.001  Score=59.23  Aligned_cols=78  Identities=18%  Similarity=0.100  Sum_probs=49.0

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.++.|..+.+|+....  +..+++|.....    ....+..|..+++.+.....-.+.+++..... .+..+++||++
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv~e~~   84 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWIIMEYA   84 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEEEecC
Confidence            355778888999998753  347888986532    12345678878877763211223334433221 45789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        85 ~~~~L   89 (277)
T cd06917          85 EGGSV   89 (277)
T ss_pred             CCCcH
Confidence            98754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=97.36  E-value=0.001  Score=58.77  Aligned_cols=75  Identities=12%  Similarity=-0.014  Sum_probs=47.2

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|..+.+|+....  +..+++|.....   .   ...+..|.+.++.+..   -.+++++..... .+..++++|
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   82 (267)
T cd08228           7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH---PNVIKYLDSFIE-DNELNIVLE   82 (267)
T ss_pred             eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC---cceeeeeeeEEE-CCeEEEEEE
Confidence            345788888999998763  347888865421   1   1234567777766643   224444443322 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +.+|.++
T Consensus        83 ~~~~~~L   89 (267)
T cd08228          83 LADAGDL   89 (267)
T ss_pred             ecCCCcH
Confidence            9998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=97.36  E-value=0.0028  Score=56.45  Aligned_cols=76  Identities=16%  Similarity=0.074  Sum_probs=46.5

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.++.|..+.+|+....  +..+++|......    ...+..|...++.+..   -.+.+++..... .+..+++|||
T Consensus         8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   83 (277)
T cd06641           8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIMEY   83 (277)
T ss_pred             hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC---CCEeEEEEEEEe-CCeEEEEEEe
Confidence            3455788888999998653  3378889875321    1234456665555532   123344433222 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus        84 ~~~~~l   89 (277)
T cd06641          84 LGGGSA   89 (277)
T ss_pred             CCCCcH
Confidence            998654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=97.36  E-value=0.0016  Score=58.45  Aligned_cols=79  Identities=18%  Similarity=0.127  Sum_probs=50.9

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v  123 (326)
                      .-++.++.|..+.+|++... ++ .+++|.....  ....+..|...++.+.++  -.+++++......    .+..+++
T Consensus        25 ~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~~~~lv  102 (291)
T cd06639          25 EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH--PNVVKFYGMFYKADKLVGGQLWLV  102 (291)
T ss_pred             EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC--CCeEEEEEEEEeccccCCCeeEEE
Confidence            34456788888999998864 33 6888887542  123456677777777543  2355555432211    2468999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus       103 ~ey~~~~sL  111 (291)
T cd06639         103 LELCNGGSV  111 (291)
T ss_pred             EEECCCCcH
Confidence            999998764

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=97.35  E-value=0.0017  Score=58.91  Aligned_cols=75  Identities=15%  Similarity=-0.006  Sum_probs=47.9

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.+|+.....  ..+++|......      ...+..|..+++.+..   -.+++++..... .+..+++||
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   81 (305)
T cd05609           6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN---PFVVSMFCSFET-KRHLCMVME   81 (305)
T ss_pred             eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEec-CCEEEEEEe
Confidence            4667888889999987643  378888765321      1234466666665532   235555544332 457799999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        82 ~~~g~~L   88 (305)
T cd05609          82 YVEGGDC   88 (305)
T ss_pred             cCCCCcH
Confidence            9998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.35  E-value=0.0034  Score=55.82  Aligned_cols=78  Identities=17%  Similarity=0.099  Sum_probs=47.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.....++.|..+.+|.+...  +..|++|.........  .|......+.++  -.+++++..... .+..+++|||+
T Consensus        17 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~e~~~~~~~~~h--~~iv~~~~~~~~-~~~~~iv~e~~   91 (267)
T PHA03390         17 EIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--IEPMVHQLMKDN--PNFIKLYYSVTT-LKGHVLIMDYI   91 (267)
T ss_pred             ccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--hhHHHHHHhhcC--CCEEEEEEEEec-CCeeEEEEEcC
Confidence            4444444899999999998863  3378889876432121  233333333332  345556654433 46899999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        92 ~~~~L   96 (267)
T PHA03390         92 KDGDL   96 (267)
T ss_pred             CCCcH
Confidence            98654

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=97.35  E-value=0.0016  Score=58.13  Aligned_cols=76  Identities=14%  Similarity=-0.129  Sum_probs=47.5

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|..+.+|+....  ...+++|..... .   ...+..|..++..+..   -.+.+++..... .+..+++||+
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   80 (279)
T cd06619           5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS---PYIIGFYGAFFV-ENRISICTEF   80 (279)
T ss_pred             heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEE-CCEEEEEEec
Confidence            3466888888999998753  347888887532 1   1234456666655532   234444443322 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus        81 ~~~~~l   86 (279)
T cd06619          81 MDGGSL   86 (279)
T ss_pred             CCCCCh
Confidence            998754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=97.35  E-value=0.002  Score=58.22  Aligned_cols=74  Identities=12%  Similarity=0.075  Sum_probs=48.8

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|..+.+|+....  +..+++|.....    ....+..|...++.+..   -.+.+++..... ++..+++||
T Consensus         9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~nI~~~~~~~~~-~~~~~lv~e   84 (301)
T cd07873           9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE   84 (301)
T ss_pred             EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC---CCcceEEEEEec-CCeEEEEEe
Confidence            45677888999999998764  346888876531    12335568877777743   234555554332 467899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      |++|
T Consensus        85 ~~~~   88 (301)
T cd07873          85 YLDK   88 (301)
T ss_pred             cccc
Confidence            9875

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=97.34  E-value=0.0019  Score=57.72  Aligned_cols=78  Identities=24%  Similarity=0.225  Sum_probs=48.0

Q ss_pred             eeEeEeCCccccceEEEEe------CCccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCce
Q 020393           52 TKICPVGGGCINLASRYGT------DAGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~------~~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~  120 (326)
                      ..++.++.|..+.+|++..      .+..+++|.....    ....+..|.++++.+..   -.+++++...... ....
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH---ENIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEecCCCceE
Confidence            3456678888888987642      1236888987642    12345567777777643   1344555432221 2467


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus        84 ~lv~e~~~~~~l   95 (283)
T cd05080          84 QLIMEYVPLGSL   95 (283)
T ss_pred             EEEecCCCCCCH
Confidence            899999988754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=97.34  E-value=0.0036  Score=54.90  Aligned_cols=78  Identities=19%  Similarity=0.137  Sum_probs=52.0

Q ss_pred             eeeEeEeCCccccceEEEEeC-CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTD-AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+-.+.++.|..+.+|+.... +..+.+|.....  ....+..|.+.++.+..   ..+.+++..... .+..+++|+++
T Consensus         6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~~   81 (256)
T cd05112           6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH---PKLVQLYGVCTE-RSPICLVFEFM   81 (256)
T ss_pred             eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC---CCeeeEEEEEcc-CCceEEEEEcC
Confidence            444567888888999998765 447888887542  23456678888877743   124444444322 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        82 ~~~~L   86 (256)
T cd05112          82 EHGCL   86 (256)
T ss_pred             CCCcH
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=97.34  E-value=0.0019  Score=58.80  Aligned_cols=77  Identities=17%  Similarity=0.014  Sum_probs=49.7

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-.+.++.|....+|++... ++ .+++|......    ...+..|.++++.+..   -.+.+++..... ++..+++||
T Consensus         4 ~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e   79 (308)
T cd06615           4 EKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS---PYIVGFYGAFYS-DGEISICME   79 (308)
T ss_pred             eEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCEEEEEee
Confidence            34566888888999998764 23 56777764321    1235567777777743   234455543322 578899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        80 y~~~~~L   86 (308)
T cd06615          80 HMDGGSL   86 (308)
T ss_pred             ccCCCcH
Confidence            9998765

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=97.33  E-value=0.0019  Score=57.85  Aligned_cols=76  Identities=16%  Similarity=0.106  Sum_probs=45.4

Q ss_pred             EeEeCCccccceEEEEeC--Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecc---c-CCCceE
Q 020393           54 ICPVGGGCINLASRYGTD--AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---L-PTGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~-~~~~~~  121 (326)
                      ++.++.|..+.||++...  ++ .+++|.....     .......|...++.+....--.+++++....   . ..+..+
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~   85 (290)
T cd07862           6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT   85 (290)
T ss_pred             eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence            456888999999998752  33 4677865421     1123456777777775321123445544321   1 135689


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      ++||+++|
T Consensus        86 lv~e~~~~   93 (290)
T cd07862          86 LVFEHVDQ   93 (290)
T ss_pred             EEEccCCC
Confidence            99999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=97.33  E-value=0.0015  Score=58.38  Aligned_cols=72  Identities=13%  Similarity=-0.016  Sum_probs=43.7

Q ss_pred             eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.||++...  +..|.+|.....      .......|.++++.+..   -.+.+++..... +...+++||+++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~i~~~~~~~~~-~~~~~lv~e~~~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS---PFIVNLAYAFES-KTHLCLVMSLMN   76 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC---CcEEEEEEEEec-CCeEEEEEecCC
Confidence            456788899998764  336888876421      11223457777776642   123333333222 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        77 g~~L   80 (277)
T cd05607          77 GGDL   80 (277)
T ss_pred             CCCH
Confidence            8755

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=97.33  E-value=0.0025  Score=56.87  Aligned_cols=76  Identities=16%  Similarity=0.068  Sum_probs=49.3

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.++.|..+.+|+....  +..+++|......    ...+..|...++.+..   -.+++++..... .+..+++|||
T Consensus         8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   83 (277)
T cd06640           8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-GTKLWIIMEY   83 (277)
T ss_pred             hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEEEec
Confidence            4456788888899998753  3478888875321    1234556666665532   235555554433 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        84 ~~~~~L   89 (277)
T cd06640          84 LGGGSA   89 (277)
T ss_pred             CCCCcH
Confidence            999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=97.33  E-value=0.0019  Score=56.64  Aligned_cols=75  Identities=16%  Similarity=0.101  Sum_probs=45.6

Q ss_pred             eEeCCccccceEEEEeC-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393           55 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~  126 (326)
                      ..++.|....+|++... + ..+++|......     ...+..|...++.+...   .+.+++...... ....+++|||
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~e~   82 (265)
T cd08217           6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHP---NIVRYYDRIIDRSNQTLYIVMEY   82 (265)
T ss_pred             eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCC---ccceeeeeeecCCCCEEEEEehh
Confidence            45777888899998753 2 368888764321     22344566666666432   244444322221 3467999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        83 ~~~~~L   88 (265)
T cd08217          83 CEGGDL   88 (265)
T ss_pred             ccCCCH
Confidence            998755

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=97.32  E-value=0.0017  Score=57.00  Aligned_cols=71  Identities=11%  Similarity=0.033  Sum_probs=44.2

Q ss_pred             CCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           58 GGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        58 ~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      +.|..+.+|++...  +..+++|......      ...+..|.+.++.+..   ..+++++..... ....+++||+++|
T Consensus         2 g~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~~~~   77 (265)
T cd05579           2 SKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS---PYVVKLYYSFQG-KKNLYLVMEYLPG   77 (265)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC---cchhHHHHheec-CcEEEEEEecCCC
Confidence            56777899999875  3479999876421      1234556666655542   223444433222 4678999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus        78 ~~L   80 (265)
T cd05579          78 GDL   80 (265)
T ss_pred             CcH
Confidence            655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=97.32  E-value=0.0026  Score=57.14  Aligned_cols=76  Identities=13%  Similarity=0.067  Sum_probs=48.7

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      ..+.++.|..+.+|+.... ++ .+.+|.....      ....+..|.++++.+...   .++.+...... ++..+++|
T Consensus         4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~   79 (285)
T cd05632           4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ---FVVNLAYAYET-KDALCLVL   79 (285)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCc---CceeEEEEEec-CCEEEEEE
Confidence            4566888889999998764 33 6888876431      112345688888877542   23333333222 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus        80 e~~~~~~L   87 (285)
T cd05632          80 TIMNGGDL   87 (285)
T ss_pred             EeccCccH
Confidence            99998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=97.32  E-value=0.0063  Score=53.41  Aligned_cols=77  Identities=16%  Similarity=0.034  Sum_probs=50.0

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-.+.++.|....+|++...  +..+++|......   ...+..|..+++.+..   ..+.+++..... .+..+++||+
T Consensus         6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~l~~e~   81 (262)
T cd06613           6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH---PNIVAYFGSYLR-RDKLWIVMEY   81 (262)
T ss_pred             EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC---CChhceEEEEEe-CCEEEEEEeC
Confidence            34567888888999998763  3468889876432   2345667776666643   223444443222 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus        82 ~~~~~l   87 (262)
T cd06613          82 CGGGSL   87 (262)
T ss_pred             CCCCcH
Confidence            998765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=97.32  E-value=0.002  Score=57.43  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=47.6

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..++.|..+.+|+....  +..+++|......     ...+..|..+++.+..   -.+++++..... ....+++||++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~   81 (286)
T cd07832           6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH---PYVVKLLDVFPH-GSGFVLVMEYM   81 (286)
T ss_pred             eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC---CCCcceeeEEec-CCeeEEEeccc
Confidence            45788888999998763  3378889875321     2345677777776642   234455543322 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                       |.++
T Consensus        82 -~~~L   85 (286)
T cd07832          82 -PSDL   85 (286)
T ss_pred             -CCCH
Confidence             7554

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=97.32  E-value=0.0026  Score=56.39  Aligned_cols=73  Identities=15%  Similarity=0.145  Sum_probs=44.2

Q ss_pred             EeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.+|+.+...+    .+++|......    ...+..|...++.+..   -.+.+++..... .+..+++||++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~nii~~~~~~~~-~~~~~lv~e~~   77 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH---PNVLQCLGQCIE-SIPYLLVLEFC   77 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC---CCcceEEEEECC-CCceEEEEEeC
Confidence            467888899998754322    57888654321    1234456666655532   234445543322 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        78 ~~g~L   82 (269)
T cd05042          78 PLGDL   82 (269)
T ss_pred             CCCcH
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=97.32  E-value=0.0055  Score=54.98  Aligned_cols=79  Identities=16%  Similarity=0.161  Sum_probs=49.4

Q ss_pred             eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-.+.++.|....+|+....+       ..+++|......    ...+..|..+++.+.++  -.+-+++..... .+.
T Consensus        14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~   90 (293)
T cd05053          14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGVCTQ-EGP   90 (293)
T ss_pred             eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEcC-CCC
Confidence            3445678888889999987531       257888876421    12245677777766433  123334433222 467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++|||++|.++
T Consensus        91 ~~li~e~~~~~~L  103 (293)
T cd05053          91 LYVVVEYAAHGNL  103 (293)
T ss_pred             eEEEEEeCCCCcH
Confidence            8999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.32  E-value=0.0014  Score=58.77  Aligned_cols=75  Identities=11%  Similarity=0.016  Sum_probs=42.2

Q ss_pred             eCCccccceEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++...+ + .+.+|......      ......|...++.+.....-.++.++..... ++..+++|||++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~   80 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLMN   80 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecCC
Confidence            5678889999987643 3 68888765321      1122334444444432111123333332222 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        81 ~~~L   84 (279)
T cd05633          81 GGDL   84 (279)
T ss_pred             CCCH
Confidence            8765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=97.31  E-value=0.0026  Score=57.14  Aligned_cols=76  Identities=11%  Similarity=0.020  Sum_probs=48.2

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .++.++.|..+.||++...  +..+++|.....      ....+..|..+++.+...   .+..++..... .+..+++|
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~iv~~~~~~~~-~~~~~lv~   79 (285)
T cd05631           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR---FVVSLAYAYET-KDALCLVL   79 (285)
T ss_pred             EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCC---cEEEEEEEEcc-CCeEEEEE
Confidence            4567888999999998763  347888876431      112345677777766432   22333332222 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|.++
T Consensus        80 e~~~~g~L   87 (285)
T cd05631          80 TIMNGGDL   87 (285)
T ss_pred             EecCCCcH
Confidence            99998765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=97.31  E-value=0.0019  Score=57.22  Aligned_cols=73  Identities=18%  Similarity=0.171  Sum_probs=46.5

Q ss_pred             EeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.+|+....++    .+++|......    ...+..|...++.+..   ..+++++..... ....+++|||+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~   77 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH---SNLLQCLGQCTE-VTPYLLVMEFC   77 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCCcEEEEECC
Confidence            467888889999875432    57888765421    1234557776666643   235555554332 45779999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus        78 ~~g~L   82 (269)
T cd05087          78 PLGDL   82 (269)
T ss_pred             CCCcH
Confidence            98654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=97.30  E-value=0.0024  Score=59.16  Aligned_cols=72  Identities=18%  Similarity=0.294  Sum_probs=43.3

Q ss_pred             eEeCCccccceEEE-EeCCc-cEEEEecCCC-----C-----cchHHHHHHHHHHHHhcCCCCCcceeeeccc-C-CCce
Q 020393           55 CPVGGGCINLASRY-GTDAG-SFFVKTNRSI-----G-----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-P-TGGS  120 (326)
Q Consensus        55 ~~l~~G~~n~~y~v-~~~~~-~~vlK~~~~~-----~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-~-~~~~  120 (326)
                      +.+|.|....|=.. +..++ .|-+|+-...     .     ....+.|.++|+.|.      -|.++...+. . +...
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~------HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS------HPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC------CCCEEEEeeeeecCCce
Confidence            44666666554443 33344 6777876431     1     112458888888774      4666654322 1 3567


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      |+||||++|+.+
T Consensus       252 YmVlE~v~GGeL  263 (475)
T KOG0615|consen  252 YMVLEYVEGGEL  263 (475)
T ss_pred             EEEEEEecCccH
Confidence            999999999765

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=97.30  E-value=0.0022  Score=57.36  Aligned_cols=73  Identities=14%  Similarity=0.116  Sum_probs=46.2

Q ss_pred             EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|..+.+|++.... + .+.+|.....     ....+..|..+++.+...   .+.+++..... ++..+++|||
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~   81 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE---NIVELKEAFRR-RGKLYLVFEY   81 (287)
T ss_pred             EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc---cccchhhhEec-CCEEEEEEec
Confidence            4567888889999998743 3 6888876431     123456788777776532   12223322111 4688999999


Q ss_pred             ecCC
Q 020393          127 IEFG  130 (326)
Q Consensus       127 l~G~  130 (326)
                      ++|.
T Consensus        82 ~~~~   85 (287)
T cd07848          82 VEKN   85 (287)
T ss_pred             CCCC
Confidence            9874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=97.29  E-value=0.0013  Score=58.19  Aligned_cols=74  Identities=19%  Similarity=0.060  Sum_probs=48.1

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +.++.|..+.+|+....++ .+++|......         ...+..|.+.++.+..   ..+++++..... .+..+++|
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~   81 (265)
T cd06631           6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH---VNIVQYLGTCLD-DNTISIFM   81 (265)
T ss_pred             ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC---CCEeeEeeEeec-CCeEEEEE
Confidence            4577888899999876555 57888654211         1235567777666642   234555544332 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        82 e~~~~~~L   89 (265)
T cd06631          82 EFVPGGSI   89 (265)
T ss_pred             ecCCCCcH
Confidence            99998754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.29  E-value=0.0025  Score=56.06  Aligned_cols=75  Identities=17%  Similarity=0.002  Sum_probs=47.0

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .+.++.|....+|+....  +..+++|..+...        ...+..|.++++.+..   -.+.+++..... .+..+++
T Consensus         7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v   82 (263)
T cd06625           7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH---ERIVQYYGCLRD-DETLSIF   82 (263)
T ss_pred             cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC---CCeeeeEEEEcc-CCeEEEE
Confidence            355778888899998653  3478888765311        1234567666666542   124445444332 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      +|+++|..+
T Consensus        83 ~e~~~~~~l   91 (263)
T cd06625          83 MEYMPGGSV   91 (263)
T ss_pred             EEECCCCcH
Confidence            999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=97.29  E-value=0.0039  Score=55.94  Aligned_cols=79  Identities=13%  Similarity=0.149  Sum_probs=50.3

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .......++.|..+.+|+....  +..+++|.....   ....+..|...++.+..   -.+.+++..... .+..++++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h---~~vv~~~~~~~~-~~~~~~v~   95 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH---PNIVEMYSSYLV-GDELWVVM   95 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC---CChheEEEEEEc-CCeEEEEE
Confidence            4567788999999999998753  236888876422   12234456666665532   234444443222 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ++++|..+
T Consensus        96 e~~~~~~L  103 (285)
T cd06648          96 EFLEGGAL  103 (285)
T ss_pred             eccCCCCH
Confidence            99998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=97.28  E-value=0.0023  Score=56.61  Aligned_cols=27  Identities=26%  Similarity=0.300  Sum_probs=24.1

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||+++.++...++|+.
T Consensus       133 ~~i~H~dl~~~nil~~~~~~~~l~dfg  159 (269)
T cd08528         133 KRIVHRDLTPNNIMLGEDDKVTITDFG  159 (269)
T ss_pred             CceeecCCCHHHEEECCCCcEEEeccc
Confidence            479999999999999988888999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=97.28  E-value=0.0018  Score=57.11  Aligned_cols=72  Identities=14%  Similarity=0.050  Sum_probs=45.4

Q ss_pred             eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++...  +..+++|.....      ....+..|...++.+..   -.+++++..... +...++++||.+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH---PFIVKLYRTFKD-KKYIYMLMEYCL   76 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC---CCEeeeeeeEEc-CCccEEEEecCC
Confidence            356777889998875  447899987531      12345667776666642   234444443222 457899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        77 ~~~L   80 (262)
T cd05572          77 GGEL   80 (262)
T ss_pred             CCcH
Confidence            8654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=97.28  E-value=0.0033  Score=55.26  Aligned_cols=74  Identities=22%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      +.++.|..+.+|++...++ .+.+|......   ...+..|...++.+..   -.+.+++..... ....+++||+.+|.
T Consensus        12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~~~~   87 (261)
T cd05148          12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH---KHLISLFAVCSV-GEPVYIITELMEKG   87 (261)
T ss_pred             hhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCC---cchhheeeeEec-CCCeEEEEeecccC
Confidence            4467788889999876554 67778775432   2445667766666642   234444444332 45789999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        88 ~L   89 (261)
T cd05148          88 SL   89 (261)
T ss_pred             CH
Confidence            55

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=97.28  E-value=0.0035  Score=59.50  Aligned_cols=81  Identities=14%  Similarity=0.080  Sum_probs=53.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC---C----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD---A----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~---~----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ..+=.+.++.|..+.||+.+..   .    ..+.+|......    ...+..|.+++..+..+  -.+++++..... .+
T Consensus        38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H--pnIv~l~~~~~~-~~  114 (400)
T cd05105          38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH--LNIVNLLGACTK-SG  114 (400)
T ss_pred             ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC--CCeeeEEEEEcc-CC
Confidence            4444567888889999987631   1    147888775421    23456788888877543  235666655433 56


Q ss_pred             ceEEEEeeecCCCCC
Q 020393          119 GSYIIMEFIEFGSSR  133 (326)
Q Consensus       119 ~~~~v~e~l~G~~~~  133 (326)
                      ..+++|||++|+++.
T Consensus       115 ~~~lv~Ey~~~g~L~  129 (400)
T cd05105         115 PIYIITEYCFYGDLV  129 (400)
T ss_pred             ceEEEEEecCCCcHH
Confidence            889999999998763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=97.27  E-value=0.0038  Score=55.19  Aligned_cols=78  Identities=19%  Similarity=0.063  Sum_probs=48.8

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ..-++.++.|..+.+|+.... ++ .+++|.....   ....+..|...++.+..   -.+++++..... .+..+++||
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h---~~ii~~~~~~~~-~~~~~iv~e   86 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH---CNIVAYFGSYLS-REKLWICME   86 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC---CCeeeeeEEEEe-CCEEEEEEe
Confidence            334566788888999998753 33 6788887542   12345567766665532   123444433322 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        87 ~~~~~~L   93 (267)
T cd06646          87 YCGGGSL   93 (267)
T ss_pred             CCCCCcH
Confidence            9998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=97.27  E-value=0.004  Score=55.66  Aligned_cols=76  Identities=16%  Similarity=0.102  Sum_probs=45.9

Q ss_pred             EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEE
Q 020393           54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~  122 (326)
                      ++.++.|..+.+|+....+ + .+++|.....     .......|.+.++.|....--.+.+++......    ....++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l   84 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL   84 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence            4567888899999997643 3 6788876531     112345688888877642112244444332211    245789


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +||+++|
T Consensus        85 v~e~~~~   91 (288)
T cd07863          85 VFEHVDQ   91 (288)
T ss_pred             EEccccc
Confidence            9999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=97.26  E-value=0.0023  Score=57.44  Aligned_cols=79  Identities=16%  Similarity=0.040  Sum_probs=50.7

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      ...++.++.|....+|++...  +..+++|......    ...+..|.+.++.+...   .+..++...... .+..+++
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSP---YIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCC---CeeeeeeEEEccCCCeEEEE
Confidence            456778898999999999874  3478888876421    23356677777766431   233343322111 3568999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        80 ~e~~~~~~L   88 (287)
T cd06621          80 MEYCEGGSL   88 (287)
T ss_pred             EEecCCCCH
Confidence            999998755

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=97.26  E-value=0.00063  Score=61.96  Aligned_cols=137  Identities=20%  Similarity=0.246  Sum_probs=79.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeec-cc-CCC-ce
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVG-AL-PTG-GS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~-~~-~~~-~~  120 (326)
                      ++..+..+|.|....||++... .+ -|.+|.-... +   ..++..|.++++..      ..|-++... .. .++ ..
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~------~spyIV~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC------QSPYIVGFYGAFYSNGEEI  153 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC------CCCCeeeEeEEEEeCCceE
Confidence            4556667889999999999764 34 4666765321 1   23455666555433      345454432 11 145 48


Q ss_pred             EEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393          121 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  200 (326)
Q Consensus       121 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  200 (326)
                      .++|||.+|+++.           .++.....              .+          +-.    +.             
T Consensus       154 sI~mEYMDgGSLd-----------~~~k~~g~--------------i~----------E~~----L~-------------  181 (364)
T KOG0581|consen  154 SICMEYMDGGSLD-----------DILKRVGR--------------IP----------EPV----LG-------------  181 (364)
T ss_pred             EeehhhcCCCCHH-----------HHHhhcCC--------------CC----------HHH----HH-------------
Confidence            9999999998652           22221110              00          001    11             


Q ss_pred             HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcccc
Q 020393          201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPAC  251 (326)
Q Consensus       201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~  251 (326)
                         ....++++.+.. +.   ....+||+|++|.|+|+...|++-|-||.+
T Consensus       182 ---~ia~~VL~GL~Y-Lh---~~~~IIHRDIKPsNlLvNskGeVKicDFGV  225 (364)
T KOG0581|consen  182 ---KIARAVLRGLSY-LH---EERKIIHRDIKPSNLLVNSKGEVKICDFGV  225 (364)
T ss_pred             ---HHHHHHHHHHHH-Hh---hccCeeeccCCHHHeeeccCCCEEeccccc
Confidence               111223333332 21   247899999999999999888899999853

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=97.26  E-value=0.0034  Score=55.23  Aligned_cols=75  Identities=11%  Similarity=0.061  Sum_probs=48.7

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.++.|..+.+|++... + ..+++|.....    ....+..|...++.+..   ..+++++..... +...+++|+++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~iv~e~~   81 (267)
T cd06610           6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH---PNVVKYYTSFVV-GDELWLVMPYL   81 (267)
T ss_pred             eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC---CCEEEEEEEEee-CCEEEEEEecc
Confidence            455778888999998763 2 37888887532    12345677777766642   234444443222 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        82 ~~~~l   86 (267)
T cd06610          82 SGGSL   86 (267)
T ss_pred             CCCcH
Confidence            98754

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=97.26  E-value=0.0033  Score=55.31  Aligned_cols=75  Identities=19%  Similarity=0.111  Sum_probs=49.6

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.++.|..+.+|+....  +..+++|......     ...+..|...++.+..   -.+.+++..... .+..++++||
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~lv~e~   80 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVH-REKVYIFMEY   80 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC---CChhheeeeEec-CCEEEEEEec
Confidence            356788888999998753  3478888875421     2345567777776643   234555554332 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus        81 ~~~~~L   86 (264)
T cd06626          81 CSGGTL   86 (264)
T ss_pred             CCCCcH
Confidence            998755

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=97.25  E-value=0.0015  Score=60.82  Aligned_cols=75  Identities=15%  Similarity=0.121  Sum_probs=44.2

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCce
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  120 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~  120 (326)
                      -++.++.|..+.||++...  +..+++|.....     ....+..|..+++.+...   .+.+++......     ....
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~  101 (359)
T cd07876          25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK---NIISLLNVFTPQKSLEEFQDV  101 (359)
T ss_pred             EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCC---CEeeeeeeeccCCCcccccee
Confidence            3567889999999999763  337888876431     122344566666655421   223333221110     1356


Q ss_pred             EEEEeeecCC
Q 020393          121 YIIMEFIEFG  130 (326)
Q Consensus       121 ~~v~e~l~G~  130 (326)
                      +++||+++|.
T Consensus       102 ~lv~e~~~~~  111 (359)
T cd07876         102 YLVMELMDAN  111 (359)
T ss_pred             EEEEeCCCcC
Confidence            9999999763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.24  E-value=0.0021  Score=59.85  Aligned_cols=71  Identities=11%  Similarity=-0.061  Sum_probs=47.2

Q ss_pred             eeEeEeCCccccceEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      .-++.++.|....||+.....  ..+++|+....   ....|..+++.+...   .+++++..... .+..+++|+++.|
T Consensus        69 ~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~~~  141 (357)
T PHA03209         69 TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVNHP---SVIRMKDTLVS-GAITCMVLPHYSS  141 (357)
T ss_pred             EEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhCCCC---CCcChhheEEe-CCeeEEEEEccCC
Confidence            345678889999999988643  36888986432   234688877777542   34555543322 4578899998865

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.24  E-value=0.0025  Score=61.65  Aligned_cols=69  Identities=12%  Similarity=-0.009  Sum_probs=47.3

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      ...++.|..+.||+.....  ..+++|....   .....|.++++.|...   .+.+++..... .+..+++|++..|
T Consensus       174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L~Hp---nIv~l~~~~~~-~~~~~lv~e~~~~  244 (461)
T PHA03211        174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRLSHP---AVLALLDVRVV-GGLTCLVLPKYRS  244 (461)
T ss_pred             EEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHCCCC---CCCcEEEEEEE-CCEEEEEEEccCC
Confidence            4567888899999988753  3688886432   2356799888888542   35556654332 4678999998865

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.24  E-value=0.0042  Score=58.29  Aligned_cols=140  Identities=19%  Similarity=0.142  Sum_probs=82.9

Q ss_pred             eEeEeCCccccceEEEEe--CCccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           53 KICPVGGGCINLASRYGT--DAGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.+.++.|..+.|+....  ++..+.+|+....        ....+..|..+++.+..+ + .+-+++..-.+ ....|+
T Consensus        21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~H-p-nI~~l~ev~~t-~~~~~i   97 (370)
T KOG0583|consen   21 LGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSH-P-NIIRLLEVFAT-PTKIYI   97 (370)
T ss_pred             eeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccC-C-CEeEEEEEEec-CCeEEE
Confidence            345678889999988754  2346777865331        123455788888877643 2 33344433333 456999


Q ss_pred             EEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHH
Q 020393          123 IMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTI  202 (326)
Q Consensus       123 v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~  202 (326)
                      ||||+.|+.+          +..+.....    +           .      +.               .+         
T Consensus        98 vmEy~~gGdL----------~~~i~~~g~----l-----------~------E~---------------~a---------  122 (370)
T KOG0583|consen   98 VMEYCSGGDL----------FDYIVNKGR----L-----------K------ED---------------EA---------  122 (370)
T ss_pred             EEEecCCccH----------HHHHHHcCC----C-----------C------hH---------------HH---------
Confidence            9999988433          444444111    0           0      00               00         


Q ss_pred             HHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEccc-cccCc
Q 020393          203 YQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPA-CYYGH  255 (326)
Q Consensus       203 ~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~~-~~~G~  255 (326)
                      +..+.+++..+.- .    ...+++|+||++.|+|++.+ +..-|+||. +...+
T Consensus       123 r~~F~Qlisav~y-~----H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen  123 RKYFRQLISAVAY-C----HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP  172 (370)
T ss_pred             HHHHHHHHHHHHH-H----HhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence            1122333333331 1    34589999999999999988 778999984 44443

>TIGR02569 TIGR02569_actnb conserved hypothetical protein TIGR02569, Actinobacterial

Probab=97.24  E-value=0.022  Score=49.80  Aligned_cols=209  Identities=12%  Similarity=0.149  Sum_probs=108.9

Q ss_pred             eEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhc---CCCCCcceeeecccC-CCceEEEEeeecCC
Q 020393           55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYET---RTIRAPRPFKVGALP-TGGSYIIMEFIEFG  130 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~---~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~  130 (326)
                      +++++ .....||+    |..|+|......      |..+...+.+.   .++.+.+|+..-+.. --..|-..+|++|.
T Consensus        19 ~~Lg~-~w~~gwr~----G~vVls~v~~~~------~AaWsAkvre~L~~~GvRvaRPvrstDGRyVv~GWrA~~fv~G~   87 (272)
T TIGR02569        19 IQLGA-AWDGGWRV----GNVVFSMVADPA------RSAWSARVRETLFPDGVRVVRPVRSTDGRYVVAGWRADTFVAGT   87 (272)
T ss_pred             ccCCC-CCCCcEEe----ccEEEeccCCch------hhhhhHHhhhhccCCCeeEecceecCCCCeEecceeeccccCCC
Confidence            34554 44666787    578998754322      23334444332   267778888764321 12456667888987


Q ss_pred             CCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHH-HhhhHHHHHHH-------Hhh-cCChH
Q 020393          131 SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA-EHRLGYQLKLA-------LDQ-YGDST  201 (326)
Q Consensus       131 ~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~-~~~l~~~~~~~-------~~~-~~~~~  201 (326)
                       ......++..+--+||......     +.+.+..      .|.+  .+.|. ..+.. +.+..       ... ...+ 
T Consensus        88 -~~~R~DEvv~aalrlh~Ala~~-----~~P~fl~------~~~~--~d~fa~ADraA-W~e~p~~~~~~~~~~~~~~~-  151 (272)
T TIGR02569        88 -PEPRVDETVVAALRLHEALGDL-----ERPGPAA------PWAE--IDVFVAADRAA-WEERPLQSVPPGVPTAPPAA-  151 (272)
T ss_pred             -cCcchHHHHHHHHHHHHHHhcC-----CCCcccc------ccch--hhHHHHHHHHH-hhcccccccccccccccccc-
Confidence             4466777777777888887642     1121111      1211  11221 11111 00000       000 0000 


Q ss_pred             HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh----hh-cCCChHhHHHh
Q 020393          202 IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS----WC-AGFGGSFYNSY  276 (326)
Q Consensus       202 ~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~----~~-~~~~~~fl~~Y  276 (326)
                      .....-++..++.++.+....+..++||||. ||+||.+..-++|+|.-.++-+..|=-+.+    .+ ++.++.+++.+
T Consensus       152 ~~~~~~~l~~~l~~lrrpv~~p~QlvHgDl~-gt~lF~g~~~P~itDi~pywRP~~waaAvvvVDal~wg~ad~~ll~rw  230 (272)
T TIGR02569       152 DPQRSIDLINQIAGLLKPIKSPNQVVHADMY-ATTLYAGTQPPGVTDLVPVWRPAGWTAAVAIVDALLWGAVDEGIIERF  230 (272)
T ss_pred             hhhHHHHHHHHHHHHhcccCCCcceeeeecc-cceeecCCCCCceeecccccCcchhhhHHHHHHHHHhcCCCHHHHHHh
Confidence            1111122233333333333567889999997 679998777789999654554555554533    12 56678888886


Q ss_pred             hhhCCCCcCHHH---HHHHHHH
Q 020393          277 FEVMPKQPGFEK---RRDLYML  295 (326)
Q Consensus       277 ~~~~~l~~~~~~---r~~~y~l  295 (326)
                      ...    ++|.+   |..+|.+
T Consensus       231 ~h~----p~~~QlllRAllfRl  248 (272)
T TIGR02569       231 SHL----PEWPQLLLRALMFRL  248 (272)
T ss_pred             ccC----cchHHHHHHHHHHHH
Confidence            533    45544   5555544

This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=97.23  E-value=0.0047  Score=54.55  Aligned_cols=77  Identities=25%  Similarity=0.121  Sum_probs=48.0

Q ss_pred             eeEeEeCCccccceEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .-.+.++.|..+.+|+.....     ..+.+|......    ...+..|..+++.+..   -.+.+++..... .+..++
T Consensus         7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~i   82 (266)
T cd05033           7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH---PNIIRLEGVVTK-SRPVMI   82 (266)
T ss_pred             eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCcceEeEEEec-CCceEE
Confidence            345677888889999986532     257888765421    2234557766666542   234444443322 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+.+|.++
T Consensus        83 v~e~~~~~~L   92 (266)
T cd05033          83 ITEYMENGSL   92 (266)
T ss_pred             EEEcCCCCCH
Confidence            9999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=97.23  E-value=0.0029  Score=56.38  Aligned_cols=73  Identities=14%  Similarity=0.030  Sum_probs=48.0

Q ss_pred             EeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           56 PVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .++.|..+.+|++...  +..+++|......   ...+..|..+++.+..   -.+++++..... .+..+++||+++|.
T Consensus        12 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~~~   87 (280)
T cd06611          12 ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH---PNIVGLYEAYFY-ENKLWILIEFCDGG   87 (280)
T ss_pred             HhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEec-CCeEEEEeeccCCC
Confidence            3667788899998764  3378888875432   2235567777766652   235555554332 56889999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      .+
T Consensus        88 ~L   89 (280)
T cd06611          88 AL   89 (280)
T ss_pred             cH
Confidence            55

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=97.22  E-value=0.004  Score=56.78  Aligned_cols=92  Identities=12%  Similarity=0.036  Sum_probs=55.6

Q ss_pred             CchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---c---chHHHHHHHHHHHHhcCCCC
Q 020393           34 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---P---SMFEGEALGLGAMYETRTIR  105 (326)
Q Consensus        34 ~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~---~~~~~E~~~l~~L~~~~~~~  105 (326)
                      +.+++.....+..++.-......++.|..+.+|+....  +..+++|......   .   ..+..|.+.++.+..   ..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~   82 (313)
T cd06633           6 KDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH---PN   82 (313)
T ss_pred             CCHHHHHHhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC---CC
Confidence            45566666555433323445667888999999998753  3368888765321   1   224456666666642   23


Q ss_pred             CcceeeecccCCCceEEEEeeecC
Q 020393          106 APRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus       106 vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      ++.++..... ....|++|||+.|
T Consensus        83 iv~~~~~~~~-~~~~~lv~e~~~~  105 (313)
T cd06633          83 TIEYKGCYLK-EHTAWLVMEYCLG  105 (313)
T ss_pred             CccEEEEEEe-CCEEEEEEecCCC
Confidence            4445544322 4578999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.22  E-value=0.0046  Score=52.65  Aligned_cols=75  Identities=17%  Similarity=0.073  Sum_probs=51.2

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.++.|....+|++...+  ..+++|.....    ....+..|.+.++.+..   ..+++++..... ....++++|++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~   79 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH---PNIVKLYGVFED-PEPLYLVMEYC   79 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CChhhheeeeec-CCceEEEEecc
Confidence            3567778888999998864  47999998753    23456667777776632   245555554332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        80 ~~~~L   84 (225)
T smart00221       80 EGGDL   84 (225)
T ss_pred             CCCCH
Confidence            98643

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=97.22  E-value=0.00088  Score=59.46  Aligned_cols=76  Identities=11%  Similarity=0.018  Sum_probs=48.6

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|..+.+|++...  +..+++|+....      ....+..|.++++.+..+  -.+++++..... .+..+++||
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e   82 (280)
T cd05581           6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH--PGIIKLYYTFQD-EENLYFVLE   82 (280)
T ss_pred             eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC--CCchhHHHHhcC-CceEEEEEc
Confidence            345788888999998764  337888987531      123345677777666522  234555443222 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        83 ~~~~~~L   89 (280)
T cd05581          83 YAPNGEL   89 (280)
T ss_pred             CCCCCcH
Confidence            9988755

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=97.22  E-value=0.0065  Score=54.23  Aligned_cols=79  Identities=19%  Similarity=0.130  Sum_probs=50.0

Q ss_pred             eeeEeEeCCccccceEEEEeC------CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCce
Q 020393           51 ITKICPVGGGCINLASRYGTD------AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~  120 (326)
                      ..-++.++.|..+.+|+....      +..+++|......   ...+..|.++++.+..   -.+++++...... ....
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEccCCCCce
Confidence            344567888889999998632      2368888875432   2345678877776642   2244444432221 3467


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++|||++|.++
T Consensus        83 ~lv~e~~~~~~L   94 (284)
T cd05081          83 RLVMEYLPYGSL   94 (284)
T ss_pred             EEEEEecCCCCH
Confidence            899999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=97.22  E-value=0.0044  Score=54.02  Aligned_cols=75  Identities=16%  Similarity=0.024  Sum_probs=49.4

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.++.|....+|+....  +..+++|......     ...+..|.+.++.+..   -.+++++..... .+..+++|++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~   80 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH---PNIVKYIGSIET-SDSLYIILEY   80 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC---CCccEEEEEEEe-CCEEEEEEec
Confidence            466788888999998764  3378999886532     2335667777666643   234455544332 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        81 ~~~~~L   86 (254)
T cd06627          81 AENGSL   86 (254)
T ss_pred             CCCCcH
Confidence            988643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=97.21  E-value=0.0035  Score=55.35  Aligned_cols=74  Identities=14%  Similarity=0.044  Sum_probs=46.9

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCC---c---------chHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---P---------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~---------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ..++.|..+.+|+....  +..+++|......   .         ..+..|..+++.+..   -.+++++..... .+..
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~   81 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH---ENIVQYLGSSLD-ADHL   81 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEe-CCcc
Confidence            34677888899998753  3478888764321   1         234567777776643   234555544332 5688


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|..+
T Consensus        82 ~lv~e~~~~~~L   93 (267)
T cd06628          82 NIFLEYVPGGSV   93 (267)
T ss_pred             EEEEEecCCCCH
Confidence            999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.20  E-value=0.00096  Score=58.98  Aligned_cols=77  Identities=13%  Similarity=0.037  Sum_probs=50.8

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCceEEEE
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~~v~  124 (326)
                      ++.++.|....+|++....  ..+++|......  ...+..|..+++.+..+  -.+++++......     ....+++|
T Consensus        11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~lv~   88 (275)
T cd06608          11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPGNDDQLWLVM   88 (275)
T ss_pred             eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCCcceEEEEEE
Confidence            4667778888899988642  368889876432  24466788888877544  3455565543210     23579999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus        89 e~~~~~~L   96 (275)
T cd06608          89 ELCGGGSV   96 (275)
T ss_pred             EcCCCCcH
Confidence            99998754

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=97.20  E-value=0.0033  Score=56.10  Aligned_cols=72  Identities=19%  Similarity=0.133  Sum_probs=47.2

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|..+.+|+.+..  +..+++|.....  .   ...+..|...++.+..   -.+++++..... ++..+++|||
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~   80 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH---PNIVCLQDVLMQ-ESRLYLIFEF   80 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC---CCEeeeEEEEee-CCeEEEEEec
Confidence            456788888999999764  337888876531  1   2345667777776642   235555544322 4688999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        81 ~~~   83 (285)
T cd07861          81 LSM   83 (285)
T ss_pred             CCC
Confidence            875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=97.20  E-value=0.0044  Score=54.65  Aligned_cols=71  Identities=14%  Similarity=0.074  Sum_probs=45.6

Q ss_pred             eCCccccceEEEEeC--C-c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD--A-G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~-~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|+....  + + .+.+|+.....    ...+..|..+++.+..   ..+.+++....  ....+++|||++
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~ii~~~~~~~--~~~~~lv~e~~~   77 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN---PYIVRMIGVCE--AEALMLVMEMAS   77 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC---CCeEEEEEEEc--CCCeEEEEEeCC
Confidence            677888899986542  2 2 47888875432    2335678887777743   23444444332  357899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        78 ~~~L   81 (257)
T cd05115          78 GGPL   81 (257)
T ss_pred             CCCH
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=97.20  E-value=0.0038  Score=55.56  Aligned_cols=132  Identities=19%  Similarity=0.216  Sum_probs=78.4

Q ss_pred             eEeEeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceee-ecccCCCceEEE
Q 020393           53 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFK-VGALPTGGSYII  123 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~-~~~~~~~~~~~v  123 (326)
                      -+..+|.|....|-.|+... | -|-+|+-...      +.+....|..+|+.+.    .|.+.-+. ...+ .+.-|+|
T Consensus        48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~----~PFlv~l~~t~~d-~~~lymv  122 (355)
T KOG0616|consen   48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS----HPFLVKLYGTFKD-NSNLYMV  122 (355)
T ss_pred             heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc----CceeEEEEEeecc-CCeEEEE
Confidence            35567889999999998743 4 4666776532      1223445666666553    33333332 2221 4688999


Q ss_pred             EeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393          124 MEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  203 (326)
Q Consensus       124 ~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  203 (326)
                      |++++|+.+          ..-+++...    |.                 +.-..||..+ +                 
T Consensus       123 meyv~GGEl----------FS~Lrk~~r----F~-----------------e~~arFYAAe-i-----------------  153 (355)
T KOG0616|consen  123 MEYVPGGEL----------FSYLRKSGR----FS-----------------EPHARFYAAE-I-----------------  153 (355)
T ss_pred             EeccCCccH----------HHHHHhcCC----CC-----------------chhHHHHHHH-H-----------------
Confidence            999999754          334444332    21                 1112344321 1                 


Q ss_pred             HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc
Q 020393          204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP  249 (326)
Q Consensus       204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~  249 (326)
                        +- .++    ++    ....++..||+|.|||+|.+|..-|.||
T Consensus       154 --vl-Ale----yl----H~~~iiYRDLKPENiLlD~~G~iKitDF  188 (355)
T KOG0616|consen  154 --VL-ALE----YL----HSLDIIYRDLKPENLLLDQNGHIKITDF  188 (355)
T ss_pred             --HH-HHH----HH----HhcCeeeccCChHHeeeccCCcEEEEec
Confidence              11 111    11    2457999999999999999998899996

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.20  E-value=0.0041  Score=58.82  Aligned_cols=70  Identities=11%  Similarity=-0.032  Sum_probs=46.6

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      -++.++.|..+.+|+....  ...+++|....   ..+..|+++++.|..-   .+.+++..... .+..+++++++.|
T Consensus        96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~Hp---nIv~~~~~~~~-~~~~~lv~e~~~~  167 (391)
T PHA03212         96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINHP---SIIQLKGTFTY-NKFTCLILPRYKT  167 (391)
T ss_pred             EEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCCC---CCCCEeEEEEE-CCeeEEEEecCCC
Confidence            3567888999999998763  23678886532   3356899988888542   34445443322 4577889888754

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=97.20  E-value=0.0041  Score=56.37  Aligned_cols=79  Identities=11%  Similarity=0.082  Sum_probs=51.0

Q ss_pred             eeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-.+.++.|..+.+|+.+..       ...+.+|......    ...+..|.++++.+..+  -.+.+++..... .+.
T Consensus        37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~  113 (302)
T cd05055          37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH--ENIVNLLGACTI-GGP  113 (302)
T ss_pred             eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC--CCcceEEEEEec-CCc
Confidence            334556788888899987631       1257788765421    23456788888887543  245555544332 467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus       114 ~~lv~e~~~~~~L  126 (302)
T cd05055         114 ILVITEYCCYGDL  126 (302)
T ss_pred             eEEEEEcCCCCcH
Confidence            8999999998755

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=97.19  E-value=0.0062  Score=55.44  Aligned_cols=80  Identities=18%  Similarity=0.172  Sum_probs=50.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC---------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393           50 HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  116 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~---------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~  116 (326)
                      +..-.+.++.|....+|+++..         ...+++|......    ...+..|...++.+..+  -.+.+++..... 
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-   89 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH--KNIINLLGVCTQ-   89 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--CCeeeEEEEEcc-
Confidence            3444567888999999998631         1257788875421    12345677777766433  235555554332 


Q ss_pred             CCceEEEEeeecCCCC
Q 020393          117 TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       117 ~~~~~~v~e~l~G~~~  132 (326)
                      .+..+++||+++|.++
T Consensus        90 ~~~~~lv~e~~~~g~L  105 (314)
T cd05099          90 EGPLYVIVEYAAKGNL  105 (314)
T ss_pred             CCceEEEEecCCCCcH
Confidence            4678999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=97.19  E-value=0.0034  Score=55.63  Aligned_cols=76  Identities=16%  Similarity=0.049  Sum_probs=48.6

Q ss_pred             eEeEeCCccccceEEEEeC-C-ccEEEEecCCC----Cc---------chHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           53 KICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GP---------SMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~---------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      ..+.++.|..+.+|+.... + ..+++|.....    ..         ..+..|...++.+..   ..+++++..... .
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~   80 (272)
T cd06629           5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH---LNIVQYLGFETT-E   80 (272)
T ss_pred             ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC---CCcceEEEEecc-C
Confidence            3456888899999998643 3 36888865421    00         124456666666642   235566655433 4


Q ss_pred             CceEEEEeeecCCCC
Q 020393          118 GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~  132 (326)
                      +..+++||+++|.++
T Consensus        81 ~~~~lv~e~~~~~~L   95 (272)
T cd06629          81 EYLSIFLEYVPGGSI   95 (272)
T ss_pred             CceEEEEecCCCCcH
Confidence            688999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=97.19  E-value=0.0031  Score=55.45  Aligned_cols=75  Identities=13%  Similarity=0.128  Sum_probs=43.6

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCC---cch---HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSM---FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~---~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++++.|..+.+|+....  +..+++|..+...   ...   +..|...+.....  ...+++++..... .+..++++||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~-~~~~~lv~e~   78 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQS-KDYLYLVMEY   78 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEc-CCeEEEEEec
Confidence            45778888999998763  3478889875421   111   1223322222212  1234555544332 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        79 ~~~~~L   84 (260)
T cd05611          79 LNGGDC   84 (260)
T ss_pred             cCCCCH
Confidence            999765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.19  E-value=0.00024  Score=72.93  Aligned_cols=130  Identities=18%  Similarity=0.221  Sum_probs=78.5

Q ss_pred             eCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ||.|.++.|..|.-.. + -|-.|+-..      .+.+.|..|..++-.-...   =+-.+.++-.+ +..-|+||+|.+
T Consensus        83 IGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~---Wiv~LhyAFQD-~~~LYlVMdY~p  158 (1317)
T KOG0612|consen   83 IGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSE---WIVQLHYAFQD-ERYLYLVMDYMP  158 (1317)
T ss_pred             hcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcH---HHHHHHHHhcC-ccceEEEEeccc
Confidence            6888999999887632 3 355555432      1235677777766321100   01112222221 468899999999


Q ss_pred             CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHH
Q 020393          129 FGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR  208 (326)
Q Consensus       129 G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  208 (326)
                      |+++          |.-|-+       |+ +       +|      ++|..||..+.                    + -
T Consensus       159 GGDl----------ltLlSk-------~~-~-------~p------E~~ArFY~aEi--------------------V-l  186 (1317)
T KOG0612|consen  159 GGDL----------LTLLSK-------FD-R-------LP------EDWARFYTAEI--------------------V-L  186 (1317)
T ss_pred             CchH----------HHHHhh-------cC-C-------Ch------HHHHHHHHHHH--------------------H-H
Confidence            9755          544433       22 1       11      57888886421                    0 0


Q ss_pred             HHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          209 LMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       209 l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      .++.+        ..-++||.|++|+|||+|..|..-+=||.
T Consensus       187 Aldsl--------H~mgyVHRDiKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  187 ALDSL--------HSMGYVHRDIKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             HHHHH--------HhccceeccCCcceeEecccCcEeeccch
Confidence            11111        24589999999999999999988888874

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=97.19  E-value=0.0047  Score=54.65  Aligned_cols=75  Identities=19%  Similarity=0.069  Sum_probs=46.7

Q ss_pred             EeEeCCccccceEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           54 ICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .+.++.|..+.+|+....  ++   .+.+|......    ...+..|..+++.+..   -.+.+++..... ++..+++|
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   84 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SKPVMIVT   84 (267)
T ss_pred             eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEEEE
Confidence            456788888999987642  22   57788765321    2345567766666532   134444443322 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|.++
T Consensus        85 e~~~~~~L   92 (267)
T cd05066          85 EYMENGSL   92 (267)
T ss_pred             EcCCCCCH
Confidence            99998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=97.18  E-value=0.002  Score=67.08  Aligned_cols=78  Identities=18%  Similarity=0.068  Sum_probs=49.8

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      .-+..|+.|.++.||++.... + .+++|.....     ....+..|+.+++.|...   .+.+++...... .+..|+|
T Consensus        16 eIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HP---NIVrl~d~f~de~~~~lyIV   92 (1021)
T PTZ00266         16 EVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHK---NIVRYIDRFLNKANQKLYIL   92 (1021)
T ss_pred             EEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCC---CcCeEEEEEEecCCCEEEEE
Confidence            345678889999999997643 2 5777775431     123456788888777532   244444322111 3568999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|..+
T Consensus        93 MEY~~gGSL  101 (1021)
T PTZ00266         93 MEFCDAGDL  101 (1021)
T ss_pred             EeCCCCCcH
Confidence            999998755

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=97.17  E-value=0.0032  Score=54.86  Aligned_cols=72  Identities=11%  Similarity=0.018  Sum_probs=45.2

Q ss_pred             eCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|....+|++...  +..+++|......      ...+..|...++.+..   ..++.++..... ++..+++||+++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH---PFIVKLHYAFQT-EEKLYLVLEYAP   76 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC---CcHHHHHHHeec-CCeeEEEEecCC
Confidence            356778899998764  3478889875421      1245567776666642   234444433222 468899999998


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        77 ~~~L   80 (250)
T cd05123          77 GGEL   80 (250)
T ss_pred             CCcH
Confidence            7654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=97.17  E-value=0.0026  Score=56.72  Aligned_cols=72  Identities=13%  Similarity=0.034  Sum_probs=43.9

Q ss_pred             eCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++...  +..|.+|.....      ....+..|.++++.+..  + .++..+..... .+..+++|||++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~-~~~~~lv~e~~~   76 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS--R-FIVSLAYAFET-KDDLCLVMTLMN   76 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC--C-CEeeeeeEEec-CCeEEEEEecCC
Confidence            356778899998753  336888877531      12234467777776642  1 23333322222 468899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        77 ~~~L   80 (277)
T cd05577          77 GGDL   80 (277)
T ss_pred             CCcH
Confidence            8655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=97.17  E-value=0.00096  Score=58.17  Aligned_cols=76  Identities=17%  Similarity=0.069  Sum_probs=48.4

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e  125 (326)
                      .+.++.|....+|+....  +..+++|......     ...+..|...++.+..   -.+.+++...... ....++++|
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH---PNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC---CCEeeEEEEEecCCCCeEEEEEE
Confidence            356777888899998765  3378888876432     3445667777776652   2244444433321 157899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        82 ~~~~~~L   88 (260)
T cd06606          82 YVSGGSL   88 (260)
T ss_pred             ecCCCcH
Confidence            9987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=97.17  E-value=0.0045  Score=54.90  Aligned_cols=73  Identities=16%  Similarity=0.197  Sum_probs=46.1

Q ss_pred             eCCccccceEEEEeCC-c---cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTDA-G---SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~-~---~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++...+ +   .+.+|.....    ....+..|.+.+..+..+ + .+.+++..... .+..+++||+.+
T Consensus         3 lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~-~~~~~lv~e~~~   79 (270)
T cd05047           3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-P-NIINLLGACEH-RGYLYLAIEYAP   79 (270)
T ss_pred             CCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccC-C-CeeeEEEEEec-CCCceEEEEeCC
Confidence            5678888999987643 2   3466665431    123456788888777543 1 24445544332 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        80 ~~~L   83 (270)
T cd05047          80 HGNL   83 (270)
T ss_pred             CCcH
Confidence            8755

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=97.16  E-value=0.004  Score=55.91  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=47.6

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~  121 (326)
                      ..+.++.|..+.+|+....  +..+++|.....     ....+..|..+++.+.++  -.+++++......    ....|
T Consensus         5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~~~~   82 (295)
T cd07837           5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES--IYIVRLLDVEHVEEKNGKPSLY   82 (295)
T ss_pred             EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC--CCccceeeeEeecCCCCCceEE
Confidence            3456788888999998764  337888986532     123456788888888643  2344555433221    12379


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      ++|||++|
T Consensus        83 lv~e~~~~   90 (295)
T cd07837          83 LVFEYLDS   90 (295)
T ss_pred             EEeeccCc
Confidence            99999976

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PHA03207 serine/threonine kinase US3; Provisional

Probab=97.16  E-value=0.0013  Score=62.09  Aligned_cols=72  Identities=8%  Similarity=-0.069  Sum_probs=46.9

Q ss_pred             eeEeEeCCccccceEEEEeCC----ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           52 TKICPVGGGCINLASRYGTDA----GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .-+..++.|....||+....+    ..+++|.....  .....|.++++.|...   .+.+++..... .+..+++|++.
T Consensus        95 ~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h~---~iv~~~~~~~~-~~~~~lv~e~~  168 (392)
T PHA03207         95 NILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISHR---AIINLIHAYRW-KSTVCMVMPKY  168 (392)
T ss_pred             EEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCCC---CccceeeeEee-CCEEEEEehhc
Confidence            345668889999999986432    25788876542  2346788888888532   34445543322 45788999987


Q ss_pred             cC
Q 020393          128 EF  129 (326)
Q Consensus       128 ~G  129 (326)
                      .|
T Consensus       169 ~~  170 (392)
T PHA03207        169 KC  170 (392)
T ss_pred             CC
Confidence            65

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=97.16  E-value=0.0029  Score=58.97  Aligned_cols=75  Identities=13%  Similarity=0.144  Sum_probs=44.0

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeee---ccc-C-CCce
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKV---GAL-P-TGGS  120 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~-~-~~~~  120 (326)
                      -++.++.|..+.||++...  +..+++|.....     ....+..|..+++.+...   .+..++..   ... . ....
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~ii~~~~~~~~~~~~~~~~~~  104 (364)
T cd07875          28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIIGLLNVFTPQKSLEEFQDV  104 (364)
T ss_pred             EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCC---CccccceeecccccccccCeE
Confidence            3466888999999998753  336888876531     122344677766666432   12222221   111 0 2357


Q ss_pred             EEEEeeecCC
Q 020393          121 YIIMEFIEFG  130 (326)
Q Consensus       121 ~~v~e~l~G~  130 (326)
                      |+|||+++|.
T Consensus       105 ~lv~e~~~~~  114 (364)
T cd07875         105 YIVMELMDAN  114 (364)
T ss_pred             EEEEeCCCCC
Confidence            9999999763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=97.16  E-value=0.0051  Score=55.35  Aligned_cols=73  Identities=11%  Similarity=-0.028  Sum_probs=44.8

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCCc--------chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIGP--------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~--------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ++.++.|..+.+|+....  +..+++|.......        ..+..|.+.++.+..   ..+.+++..... .+..++|
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv   80 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH---PNIIGLLDVFGH-KSNINLV   80 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC---CCChhhhheeec-CCEEEEE
Confidence            345788888999998753  34789988764211        123456666665542   223444433322 4688999


Q ss_pred             EeeecCCC
Q 020393          124 MEFIEFGS  131 (326)
Q Consensus       124 ~e~l~G~~  131 (326)
                      ||++ +..
T Consensus        81 ~e~~-~~~   87 (298)
T cd07841          81 FEFM-ETD   87 (298)
T ss_pred             Eccc-CCC
Confidence            9999 543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=97.14  E-value=0.0092  Score=53.26  Aligned_cols=75  Identities=13%  Similarity=0.083  Sum_probs=48.1

Q ss_pred             EeEeCCccccceEEEEe---C--C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           54 ICPVGGGCINLASRYGT---D--A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~---~--~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .+.++.|..+.+|+...   +  . ..+.+|......    ...+..|.++++.+..   -.+++++..... ....+++
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv   85 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH---PNIVCLLGVVTQ-EQPVCML   85 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CCeeeEEEEEec-CCceEEE
Confidence            36678888899999763   1  2 267778775321    1345668777777743   234555544332 4578999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        86 ~e~~~~~~L   94 (283)
T cd05090          86 FEYLNQGDL   94 (283)
T ss_pred             EEcCCCCcH
Confidence            999998755

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=97.14  E-value=0.0026  Score=57.34  Aligned_cols=74  Identities=18%  Similarity=0.089  Sum_probs=49.0

Q ss_pred             eEeCCccccceEEEEeCC----------------ccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecc
Q 020393           55 CPVGGGCINLASRYGTDA----------------GSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGA  114 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~----------------~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~  114 (326)
                      +.++.|....+|++...+                ..+++|..+.. .   ...+..|.++++.+..   ..+++++....
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~   87 (295)
T cd05097          11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN---PNIIRLLGVCV   87 (295)
T ss_pred             hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCcCeEEEEEc
Confidence            457888888899876432                13788887642 1   2345678877777643   24566665543


Q ss_pred             cCCCceEEEEeeecCCCC
Q 020393          115 LPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       115 ~~~~~~~~v~e~l~G~~~  132 (326)
                      . .+..+++||+++|.++
T Consensus        88 ~-~~~~~lv~e~~~~~~L  104 (295)
T cd05097          88 S-DDPLCMITEYMENGDL  104 (295)
T ss_pred             C-CCccEEEEecCCCCcH
Confidence            3 4678999999998765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.13  E-value=0.0039  Score=55.92  Aligned_cols=76  Identities=17%  Similarity=0.151  Sum_probs=47.3

Q ss_pred             eEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           53 KICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      -.+.++.|..+.+|+....       ...+.+|......    ...+..|...++.+..   -.+++++..... .+..+
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~   85 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC---HHVVRLLGVVSK-GQPTL   85 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCcE
Confidence            3567888999999987532       1268888764321    1123346555555532   235556654332 45789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++|||++|.++
T Consensus        86 lv~e~~~~g~L   96 (288)
T cd05061          86 VVMELMAHGDL   96 (288)
T ss_pred             EEEeCCCCCCH
Confidence            99999998765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=97.13  E-value=0.0024  Score=56.08  Aligned_cols=75  Identities=15%  Similarity=0.130  Sum_probs=48.7

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.++.|....+|+++..  +..+++|......    ...+..|...+..+..   ..+++++..... .+..+++||++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e~~   81 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES---PYVVKCYGAFYK-EGEISIVLEYM   81 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEcc-CCeEEEEEEec
Confidence            456777778889998765  3478889876432    2345567666666652   234445443322 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        82 ~~~~L   86 (264)
T cd06623          82 DGGSL   86 (264)
T ss_pred             CCCcH
Confidence            98754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=97.13  E-value=0.0059  Score=54.67  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=49.4

Q ss_pred             eeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           52 TKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .-+..++.|..+.+|++...       ...+.+|......    ...+..|...++.+..   -.+.+++..... +...
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h---~~iv~~~~~~~~-~~~~   83 (288)
T cd05050           8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH---PNIVKLLGVCAV-GKPM   83 (288)
T ss_pred             eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC---CchheEEEEEcC-CCcc
Confidence            34456788888999998752       3368888875421    2335567777766642   234555544332 4578


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+.+|..+
T Consensus        84 ~lv~e~~~~~~L   95 (288)
T cd05050          84 CLLFEYMAYGDL   95 (288)
T ss_pred             EEEEecCCCCCH
Confidence            999999998654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=97.12  E-value=0.0018  Score=57.65  Aligned_cols=74  Identities=16%  Similarity=0.055  Sum_probs=45.3

Q ss_pred             eEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +.++.|..+.+|+.... ++ .+++|......    ...+..|...++.+..   -.+++++..... .+..+++||+++
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~~   85 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYITRYYGSYLK-GTKLWIIMEYLG   85 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC---CccHhhhccccc-CCceEEEEEccC
Confidence            34667778889998653 23 68889875321    1235567666665532   124444433222 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        86 ~~~L   89 (277)
T cd06642          86 GGSA   89 (277)
T ss_pred             CCcH
Confidence            8654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.12  E-value=0.0074  Score=54.14  Aligned_cols=74  Identities=12%  Similarity=0.027  Sum_probs=48.4

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---C-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|..+.+|+....  ++.+++|.....   . ...+..|.+.++.+..   ..+++++..... ++..+++||
T Consensus         8 ~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~e   83 (291)
T cd07870           8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH---ANIVLLHDIIHT-KETLTFVFE   83 (291)
T ss_pred             EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC---CCEeEEEEEEec-CCeEEEEEe
Confidence            34567888888999998653  458999987532   1 1234567777777643   234455544332 457899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      ++++
T Consensus        84 ~~~~   87 (291)
T cd07870          84 YMHT   87 (291)
T ss_pred             cccC
Confidence            9965

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=97.12  E-value=0.0035  Score=57.52  Aligned_cols=73  Identities=12%  Similarity=0.098  Sum_probs=43.1

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~  122 (326)
                      .+.++.|..+.+|++...  +..+++|.....     ....+..|..+++.+...   .+.+++......    ....|+
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCC---CEeeecceEeccCCCCCceEEE
Confidence            356788888999998753  337888876421     122355688777776432   122222221110    135799


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +||+++|
T Consensus        82 v~e~~~~   88 (338)
T cd07859          82 VFELMES   88 (338)
T ss_pred             EEecCCC
Confidence            9999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=97.11  E-value=0.0051  Score=55.65  Aligned_cols=77  Identities=17%  Similarity=0.123  Sum_probs=49.8

Q ss_pred             eEeEeCCccccceEEEEeC--------C-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           53 KICPVGGGCINLASRYGTD--------A-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--------~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      -.++++.|..+.+|+....        + ..+++|.....    ....+..|..+++.+..+  -.+.+++..... .+.
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~   95 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGP   95 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC--CCchheeEEEec-CCc
Confidence            3467888889999988631        1 15788877532    123456788888877544  234455544332 467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++|||+++.++
T Consensus        96 ~~lv~e~~~~~~L  108 (304)
T cd05101          96 LYVIVEYASKGNL  108 (304)
T ss_pred             eEEEEecCCCCcH
Confidence            8999999998755

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=97.11  E-value=0.0045  Score=55.77  Aligned_cols=76  Identities=17%  Similarity=0.091  Sum_probs=49.6

Q ss_pred             eEeEeCCccccceEEEEeCC-----------------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCccee
Q 020393           53 KICPVGGGCINLASRYGTDA-----------------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPF  110 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-----------------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~  110 (326)
                      -.+.++.|..+.+|++...+                 + .+.+|......    ...+..|...++.+..   ..+++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~   85 (296)
T cd05095           9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD---PNIIRLL   85 (296)
T ss_pred             eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEE
Confidence            35568889999999875321                 1 46778775421    2345678887777743   3455666


Q ss_pred             eecccCCCceEEEEeeecCCCC
Q 020393          111 KVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       111 ~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ..... .+..+++||+++|.++
T Consensus        86 ~~~~~-~~~~~lv~e~~~~~~L  106 (296)
T cd05095          86 AVCIT-SDPLCMITEYMENGDL  106 (296)
T ss_pred             EEEec-CCccEEEEEeCCCCcH
Confidence            55433 4678999999998755

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=97.11  E-value=0.0049  Score=55.24  Aligned_cols=74  Identities=14%  Similarity=0.081  Sum_probs=48.7

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|..+.+|+....  +..|++|.....    ....+..|..+++.+...   .+.+++..... ....++|||
T Consensus         8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e   83 (291)
T cd07844           8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA---NIVTLHDIIHT-KKTLTLVFE   83 (291)
T ss_pred             eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc---ceeeEEEEEec-CCeEEEEEe
Confidence            34567888888999998764  337889986532    122345688888877532   34455544332 468899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      |++|
T Consensus        84 ~~~~   87 (291)
T cd07844          84 YLDT   87 (291)
T ss_pred             cCCC
Confidence            9975

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=97.10  E-value=0.0038  Score=54.61  Aligned_cols=75  Identities=13%  Similarity=0.006  Sum_probs=49.5

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .+.++.|....+|+....+  ..+++|..+... ...+..|.+.++.+..   ..+++++..... ....++++|+++|.
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~   83 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS---PYIVKYYGSYFK-NTDLWIVMEYCGAG   83 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC---CcEeeeeeeeec-CCcEEEEEecCCCC
Confidence            3446777788899987653  478889876432 3456778877777732   234445543332 46889999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      .+
T Consensus        84 ~L   85 (256)
T cd06612          84 SV   85 (256)
T ss_pred             cH
Confidence            54

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=97.10  E-value=0.0058  Score=54.24  Aligned_cols=74  Identities=15%  Similarity=0.010  Sum_probs=46.7

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ..++.|..+.+|+....  +..+++|......    ...+..|..+++.+..   -.+.+++..... +...++++|+++
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e~~~   82 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS---PYITKYYGSFLK-GSKLWIIMEYCG   82 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC---CCeeeeeEEEEE-CCeEEEEEEeeC
Confidence            34667778899998754  3378889875421    2235567777777752   123334433222 468899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        83 ~~~L   86 (274)
T cd06609          83 GGSC   86 (274)
T ss_pred             CCcH
Confidence            8755

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=97.10  E-value=0.0053  Score=55.68  Aligned_cols=78  Identities=18%  Similarity=0.134  Sum_probs=50.2

Q ss_pred             eeEeEeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           52 TKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      .=.+.++.|..+.+|++...+         ..+++|......    ...+..|.++++.+..+  -.+.+++..... .+
T Consensus        21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~-~~   97 (307)
T cd05098          21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DG   97 (307)
T ss_pred             EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEec-CC
Confidence            334678888899999886421         258888876421    12345677777777543  234555544332 46


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus        98 ~~~lv~e~~~~~~L  111 (307)
T cd05098          98 PLYVIVEYASKGNL  111 (307)
T ss_pred             ceEEEEecCCCCcH
Confidence            88999999988755

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=97.09  E-value=0.0019  Score=56.98  Aligned_cols=75  Identities=20%  Similarity=0.047  Sum_probs=45.8

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.++.|....+|++...  +..+++|......    ...+..|.+.++.+..   -.+++++..... .+..++++|++
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~   81 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS---PYIVGFYGAFYN-NGDISICMEYM   81 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC---Cchhhhheeeec-CCEEEEEEEec
Confidence            345677888889998775  3368888765421    1234456666655542   123344433222 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        82 ~~~~L   86 (265)
T cd06605          82 DGGSL   86 (265)
T ss_pred             CCCcH
Confidence            98654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=97.09  E-value=0.0099  Score=53.05  Aligned_cols=74  Identities=14%  Similarity=0.086  Sum_probs=45.7

Q ss_pred             eEeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      ..++.|....+|+..... + .+++|......   ...+..|.+.++.+...   .+++++..... .+..+++|||++|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~---~ii~~~~~~~~-~~~~~~v~e~~~~   86 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHP---NIVKLLDAFYY-ENNLWILIEFCAG   86 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCC---CeeeEEEEEee-CCEEEEEEEecCC
Confidence            346677788899987643 3 56677664322   22345677777766432   24445443322 4688999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      ..+
T Consensus        87 ~~l   89 (282)
T cd06643          87 GAV   89 (282)
T ss_pred             CcH
Confidence            754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=97.08  E-value=0.012  Score=52.95  Aligned_cols=75  Identities=19%  Similarity=0.197  Sum_probs=45.9

Q ss_pred             eEeCCccccceEEEEeCC-c---cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           55 CPVGGGCINLASRYGTDA-G---SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-~---~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +.++.|....+|++...+ +   ...+|..... .   ...+..|...+..+..+ + .+.+++..... .+..+++||+
T Consensus         8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~h-p-~iv~~~~~~~~-~~~~~lv~e~   84 (297)
T cd05089           8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH-P-NIINLLGACEN-RGYLYIAIEY   84 (297)
T ss_pred             eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCC-C-chhheEEEEcc-CCcceEEEEe
Confidence            457888889999986533 2   2455655431 1   12355677777777443 1 23445543322 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      .++.++
T Consensus        85 ~~~~~L   90 (297)
T cd05089          85 APYGNL   90 (297)
T ss_pred             cCCCcH
Confidence            987654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.08  E-value=0.0013  Score=64.57  Aligned_cols=79  Identities=19%  Similarity=0.114  Sum_probs=50.0

Q ss_pred             eeeEeEeCCccccceEEEE-eCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           51 ITKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~-~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      .-.-+.+|.|.++.||+-. ...| .+-+|.....    .++....|.++++.|...   .+.+.+...+..     ...
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~---NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHP---NIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCch---hhhhhcccCCccccCccccc
Confidence            3444567888999999987 4555 5666877542    345567899999888621   112222111110     246


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      ..++|||..|+++
T Consensus        92 ~vlvmEyC~gGsL  104 (732)
T KOG4250|consen   92 PVLVMEYCSGGSL  104 (732)
T ss_pred             ceEEEeecCCCcH
Confidence            7999999999866

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=97.08  E-value=0.0036  Score=55.85  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=47.6

Q ss_pred             eEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           53 KICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      -.+.++.|....+|+.....       ..+.+|......    ...+..|...++.+..   -.+.+++..... .+..+
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h---~~i~~~~~~~~~-~~~~~   84 (283)
T cd05048           9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH---PNIVCLLGVCTK-EQPTC   84 (283)
T ss_pred             hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC---cccceEEEEEcC-CCceE
Confidence            35567888888999886532       257888765321    2335567776666643   234445544322 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++|||.+|.++
T Consensus        85 ~~~e~~~~~~L   95 (283)
T cd05048          85 MLFEYLAHGDL   95 (283)
T ss_pred             EEEecCCCCcH
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=97.08  E-value=0.0026  Score=56.66  Aligned_cols=75  Identities=17%  Similarity=0.119  Sum_probs=44.3

Q ss_pred             EeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ...++.|..+.+|+....       ...+.+|......    ...+..|..+++.+..   -.+.+++..... .+..++
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~iv~~~~~~~~-~~~~~l   86 (277)
T cd05062          11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQPTLV   86 (277)
T ss_pred             eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEcC-CCCeEE
Confidence            456788888889976432       1258888764321    1224456666555532   124444443322 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus        87 v~e~~~~~~L   96 (277)
T cd05062          87 IMELMTRGDL   96 (277)
T ss_pred             EEecCCCCCH
Confidence            9999998754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=97.07  E-value=0.0066  Score=53.88  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=51.3

Q ss_pred             eeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-++.++.|..+.+|+....       ...+++|......    ...+..|.++++.+..   -.+++++..... .+.
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~   82 (275)
T cd05046           7 LQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH---KNVVRLLGLCRE-AEP   82 (275)
T ss_pred             ceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC---cceeeeEEEECC-CCc
Confidence            345666888888999998752       2257888775422    1346678888887743   224455544332 467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus        83 ~~lv~e~~~~~~L   95 (275)
T cd05046          83 HYMILEYTDLGDL   95 (275)
T ss_pred             ceEEEEecCCCcH
Confidence            8999999997654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=97.07  E-value=0.0069  Score=55.22  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=49.2

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ....+..++.|..+.||+.... ++     .+++|......    ...+..|..+++.+..   -.+.+++....  .+.
T Consensus         8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~g~~~--~~~   82 (316)
T cd05108           8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST   82 (316)
T ss_pred             hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEc--CCC
Confidence            3456677899999999998642 22     37888875321    2234566666666643   23455555433  356


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++++++.+++.+
T Consensus        83 ~~~v~e~~~~g~l   95 (316)
T cd05108          83 VQLITQLMPFGCL   95 (316)
T ss_pred             ceeeeecCCCCCH
Confidence            7899999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=97.07  E-value=0.0076  Score=52.99  Aligned_cols=72  Identities=15%  Similarity=0.120  Sum_probs=44.4

Q ss_pred             EeCCccccceEEEEe----CCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGT----DAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~----~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.|..+.+|+...    ++..+.+|+.....     ...+..|...++.+..   -.+.+++....  ....+++||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN---PYIVRMIGICE--AESWMLVMEL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCcEEEEec
Confidence            467788889998643    23478889875321     1234566666666532   23445554432  3567899999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      .++.++
T Consensus        77 ~~~~~L   82 (257)
T cd05116          77 AELGPL   82 (257)
T ss_pred             CCCCcH
Confidence            987655

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.06  E-value=0.0054  Score=54.53  Aligned_cols=72  Identities=17%  Similarity=0.202  Sum_probs=45.4

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|..+.+|+.... ++ .+++|......     ...+..|...++.+..   -.+.+++..... .+..++++|+
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~   79 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH---PNIIKLLDVFRH-KGDLYLVFEF   79 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC---CCcchHHHhhcc-CCCEEEEEec
Confidence            356778888899998764 33 68888765421     2345567777777652   223344433222 4688999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      .++
T Consensus        80 ~~~   82 (283)
T cd05118          80 MDT   82 (283)
T ss_pred             cCC
Confidence            876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=97.06  E-value=0.0056  Score=53.65  Aligned_cols=76  Identities=18%  Similarity=0.167  Sum_probs=47.9

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -++.++.|..+.+|++...  +..+++|.....     ....+..|..+++.+..   -.+++++..... .+..+++||
T Consensus         4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~lv~e   79 (256)
T cd08218           4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH---PNIVQYQESFEE-NGNLYIVMD   79 (256)
T ss_pred             EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC---CCeeeeEeeecC-CCeEEEEEe
Confidence            3567888888999998764  337888875421     12235567666666643   124444433222 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        80 ~~~~~~l   86 (256)
T cd08218          80 YCEGGDL   86 (256)
T ss_pred             cCCCCcH
Confidence            9998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=97.06  E-value=0.0021  Score=57.58  Aligned_cols=75  Identities=16%  Similarity=0.027  Sum_probs=48.4

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.++.|..+.+|++... ++ .+++|+....    ....+..|.++++.+..   -.+++++..... .+..+++|||+
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~~   85 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS---PYIVSFYGAFLN-ENNICMCMEFM   85 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC---CCcceEeeeEec-CCEEEEEEecC
Confidence            455778888999998764 33 5777765432    12345677777776642   234445544332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        86 ~~~~L   90 (284)
T cd06620          86 DCGSL   90 (284)
T ss_pred             CCCCH
Confidence            98755

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=97.06  E-value=0.0076  Score=53.65  Aligned_cols=74  Identities=15%  Similarity=0.063  Sum_probs=41.8

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC--c--chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--P--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|..+.+|++... ++ .+++|......  .  ..+..|...+.....+  ..+.+++..... ++..+++||+
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~iv~~~~~~~~-~~~~~lv~e~   81 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC--PYTVTFYGALFR-EGDVWICMEV   81 (283)
T ss_pred             EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC--CCeeeeeEEEec-CCcEEEEhhh
Confidence            4567888999999998764 33 78889775421  1  1122233322212111  234444443322 4678999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        82 ~~~   84 (283)
T cd06617          82 MDT   84 (283)
T ss_pred             hcc
Confidence            875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=97.06  E-value=0.0074  Score=54.71  Aligned_cols=90  Identities=12%  Similarity=0.012  Sum_probs=51.0

Q ss_pred             hHHHHHHhcCCCcceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcc
Q 020393           37 PIREWILSEGKATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPR  108 (326)
Q Consensus        37 ~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~  108 (326)
                      ++.+.+...-+...-...+.++.|..+.+|++...  +..+++|......      ...+..|.++++.+...   .+.+
T Consensus         3 ~~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~   79 (307)
T cd06607           3 EIAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP---NTIE   79 (307)
T ss_pred             hHHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC---CEEE
Confidence            34445544323222334566888888999998763  3478888764211      12345676666665421   2233


Q ss_pred             eeeecccCCCceEEEEeeecCC
Q 020393          109 PFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus       109 ~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++..... .+..+++||+++|.
T Consensus        80 ~~~~~~~-~~~~~lv~e~~~g~  100 (307)
T cd06607          80 YKGCYLR-EHTAWLVMEYCLGS  100 (307)
T ss_pred             EEEEEEe-CCeEEEEHHhhCCC
Confidence            3332222 46789999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=97.06  E-value=0.0063  Score=54.60  Aligned_cols=75  Identities=12%  Similarity=0.059  Sum_probs=46.6

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.++.|..+.+|++... ++ .+.+|.....      ....+..|..+++.+..  + .++..+..... .+..+++||
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~-~~~~~lv~e   80 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS--R-FVVSLAYAYET-KDALCLVLT   80 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC--C-CEeeeeeeecC-CCeEEEEEe
Confidence            456788889999998763 33 6777876431      11234457777777643  1 22333332222 357899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|..+
T Consensus        81 ~~~~~~L   87 (285)
T cd05605          81 LMNGGDL   87 (285)
T ss_pred             ccCCCcH
Confidence            9998765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=97.05  E-value=0.0071  Score=52.98  Aligned_cols=76  Identities=16%  Similarity=0.033  Sum_probs=47.9

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .++.++.|..+.+|.+...  +..+++|.....     ....+..|.++++.+..   -.+.+++..... .+..+++||
T Consensus         4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~~~e   79 (256)
T cd08221           4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH---PNIIAYYNHFMD-DNTLLIEME   79 (256)
T ss_pred             EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC---CCeeEEEeEEec-CCeEEEEEE
Confidence            4566788888877777653  337888875421     12335567777776642   124444443322 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|..+
T Consensus        80 ~~~~~~L   86 (256)
T cd08221          80 YANGGTL   86 (256)
T ss_pred             ecCCCcH
Confidence            9998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=97.05  E-value=0.0043  Score=56.24  Aligned_cols=149  Identities=20%  Similarity=0.201  Sum_probs=82.4

Q ss_pred             eeEeEeCCccccceEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           52 TKICPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      ..++.+++|....||+... ..| -+++|.-+-.     .+.....|..+|+.|+...  .+-.++......     .+.
T Consensus        14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~--~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN--HIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc--ceEEEEeeeeecccccccce
Confidence            3456688999999999765 334 5777765421     1233457888899887642  133333221111     236


Q ss_pred             eEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCC
Q 020393          120 SYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGD  199 (326)
Q Consensus       120 ~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~  199 (326)
                      -++++|+++-.        +-+.+..+   +.+  ..|.+                .           ..          
T Consensus        92 l~lvfe~~d~D--------L~~ymd~~---~~~--~~g~~----------------~-----------~~----------  121 (323)
T KOG0594|consen   92 LYLVFEFLDRD--------LKKYMDSL---PKK--PQGLP----------------P-----------RL----------  121 (323)
T ss_pred             EEEEEEeeccc--------HHHHHHhc---ccc--ccCCC----------------H-----------HH----------
Confidence            67888988632        11111111   100  00100                0           00          


Q ss_pred             hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchhhh
Q 020393          200 STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAE  259 (326)
Q Consensus       200 ~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~~D  259 (326)
                        ++..+.+++..+.- +    ...+++|.|++|.|+|++++|..-|+||. + .++-|.-.
T Consensus       122 --ik~~m~Qll~gl~~-~----H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~  176 (323)
T KOG0594|consen  122 --IKSFMRQLLRGLAF-L----HSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT  176 (323)
T ss_pred             --HHHHHHHHHHHHHH-H----HhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc
Confidence              01222333333321 1    35699999999999999999988999985 3 46655543

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=97.05  E-value=0.0081  Score=55.52  Aligned_cols=77  Identities=17%  Similarity=0.146  Sum_probs=48.3

Q ss_pred             EeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.++.|..+.+|+....       ...+.+|......    ...+..|...+..+..+  -.+.+++......+...++
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h--~niv~~~~~~~~~~~~~~~   89 (337)
T cd05054          12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH--LNVVNLLGACTKPGGPLMV   89 (337)
T ss_pred             hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC--cchhheeeeEecCCCCEEE
Confidence            456788889999987531       1368889875321    12344577777777432  2344555443322457789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|+|++|.++
T Consensus        90 v~ey~~~~~L   99 (337)
T cd05054          90 IVEYCKFGNL   99 (337)
T ss_pred             EEecCCCCCH
Confidence            9999999766

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=97.04  E-value=0.0093  Score=52.36  Aligned_cols=72  Identities=18%  Similarity=0.098  Sum_probs=44.4

Q ss_pred             EeCCccccceEEEEe--CC---ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGT--DA---GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~--~~---~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.|..+.+|+...  .+   ..+++|......    ...+..|...++.+..   ..+.+++....  ....+++|++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~~~v~e~   76 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH---PCIVRLIGVCK--GEPLMLVMEL   76 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC---CCeeeEEEEEc--CCceEEEEEe
Confidence            467788888887643  22   368889876432    1234566666666542   22444444332  3567999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        77 ~~~~~L   82 (257)
T cd05060          77 APLGPL   82 (257)
T ss_pred             CCCCcH
Confidence            988654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=97.04  E-value=0.0081  Score=53.14  Aligned_cols=75  Identities=24%  Similarity=0.135  Sum_probs=47.5

Q ss_pred             EeEeCCccccceEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           54 ICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .+.++.|..+.+|+.... ++    .+.+|..... .   ...+..|...++.+..   -.+.+++..... ++..+++|
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~-~~~~~lv~   84 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNIIHLEGVVTK-SRPVMIIT   84 (269)
T ss_pred             EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---cCcceEEEEECC-CCceEEEE
Confidence            455788888999998753 22    4888987542 1   2345567776666542   234444443322 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus        85 e~~~~~~L   92 (269)
T cd05065          85 EFMENGAL   92 (269)
T ss_pred             ecCCCCcH
Confidence            99998644

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=97.04  E-value=0.0031  Score=56.41  Aligned_cols=75  Identities=16%  Similarity=0.069  Sum_probs=47.4

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.++.|..+.+|++...  +..+++|..... .   ...+..|...++.+..   -.+++++..... .+..+++|||+
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e~~   81 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS---PYIVDFYGAFFI-EGAVYMCMEYM   81 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC---CcHHhhhhheec-CCeEEEEEeec
Confidence            345778888999998764  347888866432 1   1235567777666532   223444433222 57889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus        82 ~~~~l   86 (286)
T cd06622          82 DAGSL   86 (286)
T ss_pred             CCCCH
Confidence            98754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=97.03  E-value=0.0069  Score=54.36  Aligned_cols=75  Identities=11%  Similarity=-0.005  Sum_probs=46.7

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|..+.+|++...  +..+++|.....   .   ...+..|..+++.+...   .+...+..... .+..+++||
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~---~i~~~~~~~~~-~~~~~lv~e   80 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR---FVVSLAYAYET-KDALCLVLT   80 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCC---CeeeeeEEEec-CCEEEEEEE
Confidence            455788889999998764  337888876431   1   12344577777766432   22333332222 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        81 ~~~g~~L   87 (285)
T cd05630          81 LMNGGDL   87 (285)
T ss_pred             ecCCCcH
Confidence            9998765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=97.03  E-value=0.0083  Score=52.98  Aligned_cols=78  Identities=26%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ....+.++.|....+|++... ++    .+.+|......    ...+..|.+.++.+..   ..+.+++..... .+..+
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~   82 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH---HNIIRLEGVVTK-FKPAM   82 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC---CCeeEEEEEEcc-CCCcE
Confidence            445667888888999998753 22    47778765421    2234556666555532   234555544332 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|..+
T Consensus        83 lv~e~~~~~~L   93 (268)
T cd05063          83 IITEYMENGAL   93 (268)
T ss_pred             EEEEcCCCCCH
Confidence            99999998755

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=97.03  E-value=0.006  Score=55.18  Aligned_cols=77  Identities=13%  Similarity=0.141  Sum_probs=47.6

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .....++.|..+.+|++...  +..+++|.....   ....+..|...++.+..   -.+++++..... .+..+++||+
T Consensus        24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~iv~e~   99 (297)
T cd06659          24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---QNVVEMYKSYLV-GEELWVLMEF   99 (297)
T ss_pred             HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC---Cchhhhhhheee-CCeEEEEEec
Confidence            34556888888999998763  347888886431   12345566665555532   124444433222 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus       100 ~~~~~L  105 (297)
T cd06659         100 LQGGAL  105 (297)
T ss_pred             CCCCCH
Confidence            998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=97.02  E-value=0.012  Score=52.39  Aligned_cols=78  Identities=15%  Similarity=0.153  Sum_probs=49.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      +..-.+.++.|..+.+|+.... ++     .+.+|......    ...+..|+..++.+..   ..+.+++....  .+.
T Consensus         8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~   82 (279)
T cd05057           8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH---PHVVRLLGICL--SSQ   82 (279)
T ss_pred             HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEe--cCc
Confidence            4455677888999999998753 22     47778765432    1234567777766632   23444554433  268


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+.+|.++
T Consensus        83 ~~~v~e~~~~g~L   95 (279)
T cd05057          83 VQLITQLMPLGCL   95 (279)
T ss_pred             eEEEEecCCCCcH
Confidence            8999999988765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=97.02  E-value=0.0078  Score=53.62  Aligned_cols=73  Identities=14%  Similarity=0.089  Sum_probs=49.7

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.++.|..+.+|+.+.. ++ .+++|.....    ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   79 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH---ENIVRLHDVIHT-ENKLMLVFEY   79 (284)
T ss_pred             EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC---CCEeeeeeeEee-CCcEEEEEec
Confidence            4567888888999998864 33 6888876532    12345578888887743   245666654433 4678999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        80 ~~~   82 (284)
T cd07836          80 MDK   82 (284)
T ss_pred             CCc
Confidence            986

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=97.02  E-value=0.0046  Score=55.18  Aligned_cols=75  Identities=13%  Similarity=0.117  Sum_probs=49.3

Q ss_pred             eEeEeCCccccceEEEEeCC--ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -++.++.|....+|+....+  ..+++|.....  .   ...+..|.++++.+..   -.+++++..... ++..+++||
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e   80 (286)
T cd07846           5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH---ENLVNLIEVFRR-KKRLYLVFE   80 (286)
T ss_pred             EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC---cchhhHHHhccc-CCeEEEEEe
Confidence            45678888889999988743  37888976431  1   2335567777776643   234555544332 568899999


Q ss_pred             eecCCC
Q 020393          126 FIEFGS  131 (326)
Q Consensus       126 ~l~G~~  131 (326)
                      |++|..
T Consensus        81 ~~~~~~   86 (286)
T cd07846          81 FVDHTV   86 (286)
T ss_pred             cCCccH
Confidence            998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=97.01  E-value=0.012  Score=53.72  Aligned_cols=75  Identities=12%  Similarity=-0.021  Sum_probs=45.5

Q ss_pred             eeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ...+..++.|....+|++... + ..+++|......      ...+..|.+.++.+..   -.+.+.+..... +...++
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~l  102 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH---PNSIEYKGCYLR-EHTAWL  102 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC---CCEEEEEEEEee-CCeEEE
Confidence            345667888988999998763 2 368888765321      1224456666655532   123333333222 457899


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +|||++|
T Consensus       103 v~e~~~g  109 (317)
T cd06635         103 VMEYCLG  109 (317)
T ss_pred             EEeCCCC
Confidence            9999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.01  E-value=0.0034  Score=58.28  Aligned_cols=75  Identities=12%  Similarity=0.135  Sum_probs=44.0

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCce
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  120 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~  120 (326)
                      -++.++.|..+.||++...  +..+.+|.....  .   ...+..|..+++.+...   .+.+++......     ....
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~   97 (355)
T cd07874          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK---NIISLLNVFTPQKSLEEFQDV   97 (355)
T ss_pred             EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCC---chhceeeeeecccccccccee
Confidence            3467888999999998753  336888876431  1   12344577777666432   222333221110     2356


Q ss_pred             EEEEeeecCC
Q 020393          121 YIIMEFIEFG  130 (326)
Q Consensus       121 ~~v~e~l~G~  130 (326)
                      +++||+++|.
T Consensus        98 ~lv~e~~~~~  107 (355)
T cd07874          98 YLVMELMDAN  107 (355)
T ss_pred             EEEhhhhccc
Confidence            8999999763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=97.01  E-value=0.019  Score=51.17  Aligned_cols=78  Identities=14%  Similarity=0.145  Sum_probs=47.7

Q ss_pred             ceeeEeEeCCccccceEEEEe-CCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGT-DAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~-~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ...-++.++.|..+.+|+.+. .++     .+.+|......    ...+..|...++.+..   -.+++++....  ...
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~--~~~   82 (279)
T cd05109           8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS---PYVCRLLGICL--TST   82 (279)
T ss_pred             heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC---CCCceEEEEEc--CCC
Confidence            455667888999999999874 233     36788875422    1234455555544432   23455554433  346


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++++++.+++.+
T Consensus        83 ~~l~~~~~~~g~l   95 (279)
T cd05109          83 VQLVTQLMPYGCL   95 (279)
T ss_pred             cEEEEEcCCCCCH
Confidence            7899999988654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.00  E-value=0.0057  Score=54.54  Aligned_cols=72  Identities=18%  Similarity=0.200  Sum_probs=46.5

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|....+|++...  +..+++|......     ...+..|.+.++.+..   -.+++++..... .+..+++||+
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~iv~~~~~~~~-~~~~~iv~e~   79 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH---PNIVRLLDVVHS-ENKLYLVFEF   79 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC---CCccCHhheecc-CCeEEEEEec
Confidence            355788888899998753  3478889775321     2335568777777653   234555544332 4688999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      +++
T Consensus        80 ~~~   82 (283)
T cd07835          80 LDL   82 (283)
T ss_pred             cCc
Confidence            854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=96.99  E-value=0.0076  Score=54.73  Aligned_cols=72  Identities=15%  Similarity=0.162  Sum_probs=45.2

Q ss_pred             eEeCCccccceEEEEeCC----ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeeccc-CCCceEEEEeeec
Q 020393           55 CPVGGGCINLASRYGTDA----GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-PTGGSYIIMEFIE  128 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-~~~~~~~v~e~l~  128 (326)
                      ..++.|..+.||+....+    ..+++|...... ...+..|..+++.+...   .+.+++..... .+...+++|++.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHP---NVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCC---CeeeEEEEEeccCCCeEEEEEeeeC
Confidence            358889999999998543    268888765422 23456788888777532   12333332211 1457799999987


Q ss_pred             C
Q 020393          129 F  129 (326)
Q Consensus       129 G  129 (326)
                      +
T Consensus        84 ~   84 (317)
T cd07867          84 H   84 (317)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.99  E-value=0.009  Score=52.30  Aligned_cols=72  Identities=15%  Similarity=0.135  Sum_probs=43.8

Q ss_pred             EeCCccccceEEEEeCCc------------cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           56 PVGGGCINLASRYGTDAG------------SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~------------~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      .++.|..+.+|+....+.            .+++|......  ...+..|...++.+..   ..+.+++.....  +..+
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~--~~~~   76 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH---KHLVKLYGVCVR--DENI   76 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC---cchhheeeEEec--CCcE
Confidence            467788889998876432            25667654322  2345566666665532   234444443322  5679


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++|||++|.++
T Consensus        77 lv~e~~~~~~L   87 (259)
T cd05037          77 MVEEYVKFGPL   87 (259)
T ss_pred             EEEEcCCCCcH
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=96.99  E-value=0.0087  Score=53.47  Aligned_cols=75  Identities=9%  Similarity=-0.023  Sum_probs=42.2

Q ss_pred             eCCccccceEEEEeC--CccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGTD--AGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~~--~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.|..+.+|++...  +..+.+|......      ......|...++.+.....-.++..+..... .+..+++|||++
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~~   80 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLMN   80 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecCC
Confidence            567888899988653  2368888765321      1123344444555543211122333322221 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus        81 g~~L   84 (278)
T cd05606          81 GGDL   84 (278)
T ss_pred             CCcH
Confidence            8765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=96.98  E-value=0.0062  Score=56.97  Aligned_cols=73  Identities=12%  Similarity=0.106  Sum_probs=44.1

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC----CceEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~----~~~~~  122 (326)
                      .+.++.|..+.||++...  +..+++|.....     ....+..|..+++.+...   .+.+++.......    ...++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHD---NVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCC---CcCCHhheecCCCccccceEEE
Confidence            456888999999998753  347889976532     112345677777777532   1233332221111    25789


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +||++.+
T Consensus        82 v~e~~~~   88 (372)
T cd07853          82 VTELMQS   88 (372)
T ss_pred             Eeecccc
Confidence            9999865

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=96.97  E-value=0.0074  Score=53.90  Aligned_cols=78  Identities=17%  Similarity=0.133  Sum_probs=49.9

Q ss_pred             eeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           51 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      +.-...++.|..+.+|++...      ++ .+.+|......   ...+..|.+.++.+..   -.+.+++..... .+..
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~   82 (280)
T cd05092           7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH---QHIVRFYGVCTE-GRPL   82 (280)
T ss_pred             ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC---CCCceEEEEEec-CCce
Confidence            445667888889999998642      12 46667654322   2346677777777643   234555554332 4578


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+.+|.++
T Consensus        83 ~lv~e~~~~~~L   94 (280)
T cd05092          83 LMVFEYMRHGDL   94 (280)
T ss_pred             EEEEecCCCCCH
Confidence            999999998765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=96.97  E-value=0.0046  Score=55.55  Aligned_cols=75  Identities=15%  Similarity=0.082  Sum_probs=47.6

Q ss_pred             EeEeCCccccceEEEEeCC------c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           54 ICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~------~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ...++.|..+.+|++...+      + .+.+|......   ...+..|.+.++.+..   -.+.+++..... .+..+++
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   85 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH---EHIVKFYGVCGD-GDPLIMV   85 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC---CCcceEEEEEcc-CCceEEE
Confidence            3567888889999986421      1 46677765432   2345667776666543   234555554432 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        86 ~e~~~~~~L   94 (291)
T cd05094          86 FEYMKHGDL   94 (291)
T ss_pred             EecCCCCcH
Confidence            999998765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=96.97  E-value=0.011  Score=51.77  Aligned_cols=74  Identities=18%  Similarity=0.081  Sum_probs=46.9

Q ss_pred             eEeCCccccceEEEEeC-C-ccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           55 CPVGGGCINLASRYGTD-A-GSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +.++.|....+|+.... + ..+++|......        ...+..|...++.+..   -.+.+++..... ....++++
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~   81 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH---PNIVQYLGTERE-EDNLYIFL   81 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC---CCchheeeeEec-CCeEEEEE
Confidence            45777888899998764 3 478888764311        1235567766666642   234445544332 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        82 e~~~~~~L   89 (258)
T cd06632          82 ELVPGGSL   89 (258)
T ss_pred             EecCCCcH
Confidence            99998654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=96.96  E-value=0.0051  Score=54.03  Aligned_cols=75  Identities=11%  Similarity=0.030  Sum_probs=47.7

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.++.|..+.+|++...  +..+++|.....      ....+..|.+.++.+...   .++.++..... ....++++|
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e   80 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP---FLVNLWYSFQD-EENMYLVVD   80 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCC---ChHHHHHhhcC-CCeEEEEEe
Confidence            456788888999999875  347888977531      123455666666665321   23333332221 457899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        81 ~~~~~~L   87 (258)
T cd05578          81 LLLGGDL   87 (258)
T ss_pred             CCCCCCH
Confidence            9998755

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=96.96  E-value=0.0039  Score=55.32  Aligned_cols=73  Identities=11%  Similarity=0.067  Sum_probs=42.7

Q ss_pred             EeCCccccceEEEEeCCc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTDAG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.+|+....++    ..++|......    ...+..|...++.+..   -.+.+.+..... ....+++|||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~   77 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH---PNILQCLGQCVE-AIPYLLVFEYC   77 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC---cchhheEEEecC-CCccEEEEecC
Confidence            477888889998754322    45667654321    2334455555554432   234445543322 45789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus        78 ~~~~L   82 (268)
T cd05086          78 ELGDL   82 (268)
T ss_pred             CCCcH
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.95  E-value=0.0016  Score=59.39  Aligned_cols=74  Identities=20%  Similarity=0.109  Sum_probs=49.1

Q ss_pred             eEeEeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecc---cCCC-ceEEE
Q 020393           53 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTG-GSYII  123 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~~~~-~~~~v  123 (326)
                      ..+-++.|....||..+..+ | .+-+|......   .+.++.|..+|+.|.      .|.++....   ..++ ...++
T Consensus        21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCeeeEee
Confidence            33456788999999988754 4 56667664322   234677887776664      567776532   2133 68999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|+++
T Consensus        95 mEy~~~GsL  103 (313)
T KOG0198|consen   95 MEYAPGGSL  103 (313)
T ss_pred             eeccCCCcH
Confidence            999999755

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.94  E-value=0.0039  Score=59.76  Aligned_cols=159  Identities=16%  Similarity=0.155  Sum_probs=92.2

Q ss_pred             CCchhHHHHHHhc-C---CCcceeeEeEeCCccccceEEEEe-CCc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCC
Q 020393           33 LSDDPIREWILSE-G---KATHITKICPVGGGCINLASRYGT-DAG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRT  103 (326)
Q Consensus        33 ~~~~~i~~~l~~~-~---~~~~v~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~  103 (326)
                      ++.+++...|+.. .   +.......+.++.|.+..||.-.- ..+ .+.+|...-   ..++.+-.|..+++-+.    
T Consensus       253 ~~~~~~~~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~----  328 (550)
T KOG0578|consen  253 VSKEEILAKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH----  328 (550)
T ss_pred             chHHHHHHHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc----
Confidence            3444788777765 2   333567788899999999998643 222 445554421   12456677887776543    


Q ss_pred             CCCcceeeeccc--CCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHH
Q 020393          104 IRAPRPFKVGAL--PTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY  181 (326)
Q Consensus       104 ~~vP~~~~~~~~--~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~  181 (326)
                        .|-++-+-++  ..+.-|+||||++|+.+++......          .                       .      
T Consensus       329 --H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~----------~-----------------------~------  367 (550)
T KOG0578|consen  329 --HPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR----------M-----------------------T------  367 (550)
T ss_pred             --chHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc----------c-----------------------c------
Confidence              3334433221  1467899999999986632111000          0                       0      


Q ss_pred             HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhh
Q 020393          182 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEA  258 (326)
Q Consensus       182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~  258 (326)
                       +.++..                .-.+.++.+. +|    ...++||.|++.+|||...+|..-|.|| .|....+..
T Consensus       368 -E~qIA~----------------Icre~l~aL~-fL----H~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~  423 (550)
T KOG0578|consen  368 -EGQIAA----------------ICREILQGLK-FL----HARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ  423 (550)
T ss_pred             -HHHHHH----------------HHHHHHHHHH-HH----HhcceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence             011111                1112222222 12    2458999999999999999988889996 454444443

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=96.92  E-value=0.0036  Score=57.55  Aligned_cols=70  Identities=11%  Similarity=-0.004  Sum_probs=43.5

Q ss_pred             EeCCccccceEEEEeC--CccEEEEecCCCCcc-----------------hHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393           56 PVGGGCINLASRYGTD--AGSFFVKTNRSIGPS-----------------MFEGEALGLGAMYETRTIRAPRPFKVGALP  116 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~-----------------~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~  116 (326)
                      .++.|..+.+|++...  +..+++|........                 .+..|.++++.+...   .+++++..... 
T Consensus        16 ~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~-   91 (335)
T PTZ00024         16 HLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE---NIMGLVDVYVE-   91 (335)
T ss_pred             cccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc---ceeeeeEEEec-
Confidence            3677888899998753  337888987532110                 244677777766431   23334433222 


Q ss_pred             CCceEEEEeeecC
Q 020393          117 TGGSYIIMEFIEF  129 (326)
Q Consensus       117 ~~~~~~v~e~l~G  129 (326)
                      .+..+++||+++|
T Consensus        92 ~~~~~lv~e~~~~  104 (335)
T PTZ00024         92 GDFINLVMDIMAS  104 (335)
T ss_pred             CCcEEEEEecccc
Confidence            4688999999976

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=96.92  E-value=0.009  Score=53.59  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=48.8

Q ss_pred             eEeEeCCccccceEEEEeCC------c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           53 KICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~------~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -...++.|..+.+|++...+      + .+++|......   ...+..|.+.++.+..   -.+++++..... .+..++
T Consensus         9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   84 (288)
T cd05093           9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH---EHIVKFYGVCVE-GDPLIM   84 (288)
T ss_pred             eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCccEE
Confidence            34557888899999987521      1 46777765422   2335667777777643   234455544332 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+.+|..+
T Consensus        85 v~e~~~~~~L   94 (288)
T cd05093          85 VFEYMKHGDL   94 (288)
T ss_pred             EEEcCCCCCH
Confidence            9999998755

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=96.91  E-value=0.0053  Score=58.34  Aligned_cols=79  Identities=15%  Similarity=0.154  Sum_probs=52.1

Q ss_pred             eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      +.-.+.++.|..+.||++...+       ..+.+|......    ...+..|..++..+..+  -.+.+++..... .+.
T Consensus        39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H--~niv~~~~~~~~-~~~  115 (401)
T cd05107          39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH--LNIVNLLGACTK-GGP  115 (401)
T ss_pred             eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC--CCeEEEEEEEcc-CCC
Confidence            3345678899999999987421       268888875421    12355688877777533  234555554433 467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++|||++|+++
T Consensus       116 ~~iv~E~~~~g~L  128 (401)
T cd05107         116 IYIITEYCRYGDL  128 (401)
T ss_pred             cEEEEeccCCCcH
Confidence            8999999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=96.90  E-value=0.012  Score=52.10  Aligned_cols=76  Identities=17%  Similarity=0.009  Sum_probs=45.7

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~  122 (326)
                      .+.++.|..+.+|++...  +..+++|......        ...+..|..+++.+...   .+..++...... .+..++
T Consensus         7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE---RIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCC---CeeeEEEEEEcCCCCEEEE
Confidence            355778888899998753  3378888764211        12355677777777431   223333322111 356789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ++|+++|.++
T Consensus        84 ~~e~~~~~~L   93 (266)
T cd06651          84 FMEYMPGGSV   93 (266)
T ss_pred             EEeCCCCCcH
Confidence            9999998655

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=96.90  E-value=0.018  Score=51.17  Aligned_cols=78  Identities=22%  Similarity=0.100  Sum_probs=48.5

Q ss_pred             eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-.+.++.|..+.+|+....+       ..+.+|..+...    ...+..|...++.+..   ..+.+++..... .+.
T Consensus         8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~   83 (277)
T cd05036           8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH---QNIVRLIGVSFE-RLP   83 (277)
T ss_pred             cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCC
Confidence            3445678888899999987643       257778765421    1224456666655532   234445543332 457


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+.+|.++
T Consensus        84 ~~lv~e~~~g~~L   96 (277)
T cd05036          84 RFILLELMAGGDL   96 (277)
T ss_pred             cEEEEecCCCCCH
Confidence            7999999998765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=96.90  E-value=0.012  Score=52.97  Aligned_cols=78  Identities=13%  Similarity=0.075  Sum_probs=47.3

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ..-++.++.|..+.+|+....  +..+++|......   ...+..|...++.+..   -.+++++..... .+..|+++|
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---p~i~~~~~~~~~-~~~~~lv~e   96 (293)
T cd06647          21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH---PNIVNYLDSYLV-GDELWVVME   96 (293)
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC---CCeeehhheeee-CCcEEEEEe
Confidence            344567888888999998653  3478888865321   2334556665555532   123333322211 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|..+
T Consensus        97 ~~~~~~L  103 (293)
T cd06647          97 YLAGGSL  103 (293)
T ss_pred             cCCCCcH
Confidence            9998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.90  E-value=0.0085  Score=56.95  Aligned_cols=136  Identities=22%  Similarity=0.280  Sum_probs=81.8

Q ss_pred             eeEeEeCCccccceEEEEe-CCcc-EEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGT-DAGS-FFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~-~~~~-~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      ..++.|++|+.+.||+-.. .+|+ +-+|--+-+     ..-...+|..+|+.|....-+..=.++....  .+..|+|+
T Consensus       120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlVF  197 (560)
T KOG0600|consen  120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLVF  197 (560)
T ss_pred             HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEEE
Confidence            3567789999999999764 4454 556655432     2334568999999886532222222332221  36889999


Q ss_pred             eeecCCCCCCcHHHHHHHHHHHhhc-CCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHH
Q 020393          125 EFIEFGSSRGNQSVFGKKLAEMHKA-GKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIY  203 (326)
Q Consensus       125 e~l~G~~~~~~~~~lg~~La~lH~~-~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~  203 (326)
                      ||.+-.            |+.|-.. ...   |.                         ..++..++             
T Consensus       198 eYMdhD------------L~GLl~~p~vk---ft-------------------------~~qIKc~m-------------  224 (560)
T KOG0600|consen  198 EYMDHD------------LSGLLSSPGVK---FT-------------------------EPQIKCYM-------------  224 (560)
T ss_pred             ecccch------------hhhhhcCCCcc---cC-------------------------hHHHHHHH-------------
Confidence            999853            2222221 111   10                         01233322             


Q ss_pred             HHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          204 QRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       204 ~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                         .++++.+..     .....++|.|+++.|||+|.+|..-|=||.
T Consensus       225 ---kQLl~Gl~~-----cH~~gvlHRDIK~SNiLidn~G~LKiaDFG  263 (560)
T KOG0600|consen  225 ---KQLLEGLEY-----CHSRGVLHRDIKGSNILIDNNGVLKIADFG  263 (560)
T ss_pred             ---HHHHHHHHH-----HhhcCeeeccccccceEEcCCCCEEecccc
Confidence               233333321     135689999999999999999988888874

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=96.89  E-value=0.0073  Score=53.78  Aligned_cols=73  Identities=10%  Similarity=0.031  Sum_probs=46.2

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..++.|..+.+|+....  +..+++|.....     ....+..|..+++.+..   -.+.+++..... ....+++|||
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~   81 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH---PNLVNLIEVFRR-KRKLHLVFEY   81 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC---CCEeeeeeEEee-CCEEEEEEec
Confidence            456788888999998764  337888876421     12335567777776643   123334433222 4578999999


Q ss_pred             ecCC
Q 020393          127 IEFG  130 (326)
Q Consensus       127 l~G~  130 (326)
                      ++|.
T Consensus        82 ~~~~   85 (286)
T cd07847          82 CDHT   85 (286)
T ss_pred             cCcc
Confidence            9874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=96.89  E-value=0.011  Score=52.76  Aligned_cols=73  Identities=18%  Similarity=0.161  Sum_probs=47.0

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .++.++.|..+.+|+....  +..+++|.....     ....+..|.+.++.+..   -.+.+++..... .+..+++||
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   79 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE   79 (284)
T ss_pred             eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC---CCCcchhhhccc-CCcEEEEee
Confidence            4567888888999998753  347888876532     12346678888777743   224444433222 468899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      ++.+
T Consensus        80 ~~~~   83 (284)
T cd07860          80 FLHQ   83 (284)
T ss_pred             cccc
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=96.85  E-value=0.012  Score=51.86  Aligned_cols=76  Identities=20%  Similarity=0.069  Sum_probs=45.6

Q ss_pred             EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393           54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~  122 (326)
                      .+.++.|..+.+|+....+ + .+++|.....     .   ...+..|...++.+..   -.+++.+...... ....++
T Consensus         7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~   83 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH---ERIVQYYGCLRDPMERTLSI   83 (265)
T ss_pred             eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC---CCeeeEEeEeccCCCceEEE
Confidence            4557778888999987532 3 6888865321     1   1234567777777743   2244444432221 245789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus        84 v~e~~~~~~L   93 (265)
T cd06652          84 FMEHMPGGSI   93 (265)
T ss_pred             EEEecCCCcH
Confidence            9999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=96.85  E-value=0.0078  Score=53.56  Aligned_cols=72  Identities=15%  Similarity=0.090  Sum_probs=42.8

Q ss_pred             eEeCCccccceEEEEeCC--ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           55 CPVGGGCINLASRYGTDA--GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +.++.|..+.+|+....+  ..+++|.....    .......|...+..+.++  ..+++++..... .+..+++||++.
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~~   81 (283)
T cd07830           5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH--PNIVKLKEVFRE-NDELYFVFEYME   81 (283)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC--CCchhHHHHhhc-CCcEEEEEecCC
Confidence            457778888999988643  36888876532    111223455555555422  224444433322 568899999994


Q ss_pred             C
Q 020393          129 F  129 (326)
Q Consensus       129 G  129 (326)
                      |
T Consensus        82 ~   82 (283)
T cd07830          82 G   82 (283)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=96.85  E-value=0.011  Score=52.67  Aligned_cols=73  Identities=15%  Similarity=0.124  Sum_probs=48.8

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|..+.+|+....+  ..+++|.....     ....+..|.++++.+...   .+++++..... .+..+++|||
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~-~~~~~iv~e~   81 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE---NIVNLKEAFRR-KGRLYLVFEY   81 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCC---CeeehhheEEE-CCEEEEEEec
Confidence            4567888888999987643  37899976531     134567788888877632   34444443322 4678999999


Q ss_pred             ecCC
Q 020393          127 IEFG  130 (326)
Q Consensus       127 l~G~  130 (326)
                      +++.
T Consensus        82 ~~~~   85 (288)
T cd07833          82 VERT   85 (288)
T ss_pred             CCCC
Confidence            9874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=96.85  E-value=0.0091  Score=54.09  Aligned_cols=73  Identities=11%  Similarity=0.054  Sum_probs=46.7

Q ss_pred             EeEeCCccccceEEEEeCC----ccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393           54 ICPVGGGCINLASRYGTDA----GSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~  122 (326)
                      +..++.|..+.+|+.....    ..|++|......      ...+..|..+++.+..   -.+.+++...... ....++
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH---ENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC---CCccceEEEEeCCCCceEEE
Confidence            3458888899999998743    479999876511      2334567777776653   2234444433321 257899


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      |||++++
T Consensus        82 v~e~~~~   88 (316)
T cd07842          82 LFDYAEH   88 (316)
T ss_pred             EEeCCCc
Confidence            9999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=96.84  E-value=0.019  Score=51.10  Aligned_cols=76  Identities=14%  Similarity=0.056  Sum_probs=46.5

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCC----CceEE
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT----GGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~----~~~~~  122 (326)
                      ++.++.|..+.+|++....  ..|++|.....  .   ...+..|...++.+....--.+.+++......+    ...++
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   83 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL   83 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence            4567788888999998753  47999988631  1   123446777777776421123445554433211    13789


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +||++++
T Consensus        84 ~~e~~~~   90 (287)
T cd07838          84 VFEHVDQ   90 (287)
T ss_pred             Eehhccc
Confidence            9998865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=96.84  E-value=0.0062  Score=53.78  Aligned_cols=73  Identities=25%  Similarity=0.173  Sum_probs=44.3

Q ss_pred             EeCCccccceEEEEeCC--------ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           56 PVGGGCINLASRYGTDA--------GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--------~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .++.|..+.+|+.+..+        ..+.+|.....    ....+..|...++.+..   -.+.+++..... .+..+++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v   77 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH---PNIVKLLGVCLL-NEPQYII   77 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC---CCeeeEeeeecC-CCCeEEE
Confidence            36778888899887532        25777776432    12345567766666532   123344433322 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        78 ~e~~~~~~L   86 (269)
T cd05044          78 MELMEGGDL   86 (269)
T ss_pred             EeccCCCcH
Confidence            999998755

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=96.84  E-value=0.012  Score=53.99  Aligned_cols=76  Identities=16%  Similarity=0.134  Sum_probs=48.6

Q ss_pred             EeEeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           54 ICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .+.++.|..+.+|++...+         ..+.+|......    ...+..|.++++.+..+  -.+.+++..... .+..
T Consensus        17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~~~   93 (334)
T cd05100          17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-DGPL   93 (334)
T ss_pred             cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCC--CCeeeeeEEEcc-CCce
Confidence            4678888899999986321         147788765321    23456788888777543  124444443332 4678


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++|||++|.++
T Consensus        94 ~lv~e~~~~g~L  105 (334)
T cd05100          94 YVLVEYASKGNL  105 (334)
T ss_pred             EEEEecCCCCcH
Confidence            999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00284 protein kinase; Provisional

Probab=96.83  E-value=0.0087  Score=57.96  Aligned_cols=77  Identities=13%  Similarity=-0.038  Sum_probs=46.7

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCC---CCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTI---RAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~---~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -++.++.|..+.||+....  +..+.+|+....  .......|.++++.+......   .+..++.......+..+++|+
T Consensus       133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~  212 (467)
T PTZ00284        133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMP  212 (467)
T ss_pred             EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEe
Confidence            3566899999999998763  236888987532  122345678888777653211   244444433222356788888


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      +..|
T Consensus       213 ~~g~  216 (467)
T PTZ00284        213 KYGP  216 (467)
T ss_pred             ccCC
Confidence            7633

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=96.82  E-value=0.016  Score=51.87  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=44.0

Q ss_pred             eEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           55 CPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +.++.|..+.+|+.....       ..+.+|......    ...+..|...++.+..   -.+.+++..... .+..+++
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv   81 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH---PHVIKLYGACSQ-DGPLLLI   81 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC---CCEeeEEEEEec-CCCcEEE
Confidence            456778888999976421       246667664321    1235567766665532   123344433222 5678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      +||.+|..+
T Consensus        82 ~e~~~~~~L   90 (290)
T cd05045          82 VEYAKYGSL   90 (290)
T ss_pred             EEecCCCCH
Confidence            999998755

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=96.82  E-value=0.0073  Score=53.86  Aligned_cols=72  Identities=15%  Similarity=0.081  Sum_probs=44.9

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|..+.+|++... +| .+++|..+..     ....+..|.+.++.+...   .+.+++..... .+..++++|+
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~e~   80 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK---NIVRLYDVLHS-DKKLTLVFEY   80 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCC---CeeeHHHHhcc-CCceEEEEec
Confidence            456788888999998763 33 6788876431     123355688777766431   23333332222 4678999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        81 ~~~   83 (284)
T cd07839          81 CDQ   83 (284)
T ss_pred             CCC
Confidence            875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=96.81  E-value=0.012  Score=51.87  Aligned_cols=75  Identities=16%  Similarity=0.041  Sum_probs=44.9

Q ss_pred             eEeCCccccceEEEEeCC-----ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           55 CPVGGGCINLASRYGTDA-----GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      +.++.|..+.+|+.....     ..+++|......     ...+..|...++.+..   -.+.+++......     ...
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH---PNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC---CCeeeEEeeeccCCccccCcc
Confidence            456788889999987532     258888765321     1234566666665532   2344454432211     124


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++|+|+++.++
T Consensus        82 ~~~v~e~~~~~~l   94 (273)
T cd05035          82 PMVILPFMKHGDL   94 (273)
T ss_pred             cEEEEeccCCCCH
Confidence            7999999998754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=96.80  E-value=0.012  Score=53.42  Aligned_cols=72  Identities=15%  Similarity=0.159  Sum_probs=45.5

Q ss_pred             eEeCCccccceEEEEeCC----ccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEeeec
Q 020393           55 CPVGGGCINLASRYGTDA----GSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIE  128 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~----~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~  128 (326)
                      ..++.|..+.||+....+    ..+++|...... ......|..+++.+...   .+.+++...... +...+++|++.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHP---NVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCC---CCcceeeeEecCCCcEEEEEEeccC
Confidence            457889999999987532    368888875432 23356788888887542   233333322111 346789999987


Q ss_pred             C
Q 020393          129 F  129 (326)
Q Consensus       129 G  129 (326)
                      +
T Consensus        84 ~   84 (317)
T cd07868          84 H   84 (317)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=96.80  E-value=0.004  Score=55.10  Aligned_cols=77  Identities=16%  Similarity=0.081  Sum_probs=47.0

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc---C--CCceEEEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---P--TGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~--~~~~~~v~  124 (326)
                      .+.++.|..+.+|+....  +..+++|.....  ....+..|...+..+..+  -.+.+.+.....   +  +...|++|
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~   88 (272)
T cd06637          11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQLWLVM   88 (272)
T ss_pred             HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC--CCeeeEeeEEeecCCCCCCcEEEEEE
Confidence            345777888899988653  236888887542  223456777777776543  223344432211   1  23578999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus        89 e~~~~~~L   96 (272)
T cd06637          89 EFCGAGSV   96 (272)
T ss_pred             EcCCCCcH
Confidence            99988655

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=96.79  E-value=0.0066  Score=54.12  Aligned_cols=77  Identities=14%  Similarity=0.031  Sum_probs=47.6

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc-----CCCceEEEE
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-----~~~~~~~v~  124 (326)
                      ++.++.|..+.+|+.... . ..+++|.....  ....+..|..+++.+..+  -.+.+.+.....     .....+++|
T Consensus        21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~~~~~~~iv~   98 (282)
T cd06636          21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPGHDDQLWLVM   98 (282)
T ss_pred             heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccCCCCEEEEEE
Confidence            456788888999998763 2 36888887542  223455677766666433  123444433211     024679999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        99 e~~~~~~L  106 (282)
T cd06636          99 EFCGAGSV  106 (282)
T ss_pred             EeCCCCcH
Confidence            99998655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=96.78  E-value=0.013  Score=52.08  Aligned_cols=73  Identities=16%  Similarity=0.200  Sum_probs=46.1

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e  125 (326)
                      ++.++.|..+.+|++...+  ..+++|......     ...+..|..+++.+...   .+.+++...... .+..+++|+
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHP---NIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCC---CeeeheeeEecCCCCcEEEEec
Confidence            4567888889999997653  378888876421     12355677777777521   233333332221 268899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      +.++
T Consensus        81 ~~~~   84 (287)
T cd07840          81 YMDH   84 (287)
T ss_pred             cccc
Confidence            9975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=96.78  E-value=0.0084  Score=52.42  Aligned_cols=75  Identities=17%  Similarity=0.142  Sum_probs=49.1

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.++.|....+|++....  ..+++|.....     ....+..|...++.+..   ..+++++..... .+..++++|+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h---~~i~~~~~~~~~-~~~~~lv~e~   80 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH---PNIVTFFASFQE-NGRLFIVMEY   80 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC---CChhhhhheecc-CCeEEEEEec
Confidence            4567788888999987643  47888886431     23445678877777753   224444433222 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus        81 ~~~~~L   86 (257)
T cd08225          81 CDGGDL   86 (257)
T ss_pred             CCCCcH
Confidence            988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=96.78  E-value=0.0067  Score=54.45  Aligned_cols=75  Identities=21%  Similarity=0.179  Sum_probs=47.2

Q ss_pred             EeEeCCccccceEEEEeCC------------------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceee
Q 020393           54 ICPVGGGCINLASRYGTDA------------------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFK  111 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~------------------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~  111 (326)
                      ++.++.|..+.+|+++..+                  ..+++|......    ...+..|.++++.+..   -.+.+++.
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~   86 (296)
T cd05051          10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD---PNIARLLG   86 (296)
T ss_pred             cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC---CCEeEEEE
Confidence            4667788888888876532                  136778765421    2345567777777753   22444444


Q ss_pred             ecccCCCceEEEEeeecCCCC
Q 020393          112 VGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       112 ~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .... ++..+++||+++|.++
T Consensus        87 ~~~~-~~~~~lv~e~~~~~~L  106 (296)
T cd05051          87 VCTV-DPPLCMIMEYMENGDL  106 (296)
T ss_pred             EEec-CCCcEEEEecCCCCCH
Confidence            3322 4688999999998654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=96.75  E-value=0.016  Score=51.05  Aligned_cols=76  Identities=17%  Similarity=0.040  Sum_probs=46.5

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~  122 (326)
                      .+.++.|..+.+|+....  ...+.+|.....     .   ...+..|.++++.+...   .+.+++...... .+..++
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD---RIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCC---CcceEEEEEEcCCCCEEEE
Confidence            345777888899998753  237888875321     1   12355677777777532   234444432221 346789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ++|+.+|..+
T Consensus        84 v~e~~~~~~L   93 (264)
T cd06653          84 FVEYMPGGSI   93 (264)
T ss_pred             EEEeCCCCcH
Confidence            9999988654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=96.75  E-value=0.017  Score=50.89  Aligned_cols=74  Identities=15%  Similarity=0.026  Sum_probs=44.7

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      +.++.|..+.+|++...  +..+++|......   ...+..|...++.+..   -.+.+.+..... .+..+++||+++|
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~~   90 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH---SNIVAYFGSYLR-RDKLWICMEFCGG   90 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC---CCeeeEEEEEEe-CCEEEEEEeccCC
Confidence            44677888889998753  3378888765422   2234556666555532   123333332222 4688999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      ..+
T Consensus        91 ~~L   93 (267)
T cd06645          91 GSL   93 (267)
T ss_pred             CcH
Confidence            765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=96.75  E-value=0.028  Score=49.23  Aligned_cols=72  Identities=22%  Similarity=0.194  Sum_probs=45.8

Q ss_pred             EeCCccccceEEEEeCC--c---cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGTDA--G---SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~---~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.|..+.+|++...+  +   .+++|..+....    ..+..|...++.+...   .+.+++....  +...+++||+
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~--~~~~~~v~e~   76 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHE---NLIRLYGVVL--THPLMMVTEL   76 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCC---CccceeEEEc--CCeEEEEEEe
Confidence            46778889999987532  2   478898865322    2345677766666432   2334443332  2678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      .+|.++
T Consensus        77 ~~~~~L   82 (257)
T cd05040          77 APLGSL   82 (257)
T ss_pred             cCCCcH
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.75  E-value=0.015  Score=56.37  Aligned_cols=130  Identities=20%  Similarity=0.197  Sum_probs=83.5

Q ss_pred             eCCccccceEEEEe-CCc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           57 VGGGCINLASRYGT-DAG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        57 l~~G~~n~~y~v~~-~~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +|.|.+..+|+++. +.| .|-+|+-+.      ..++.+..|.++.+.|...   .|-+.+..-++ ...-|++.|.++
T Consensus        26 LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hp---nIV~f~~~FED-s~nVYivLELC~  101 (592)
T KOG0575|consen   26 LGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHP---NIVQFYHFFED-SNNVYIVLELCH  101 (592)
T ss_pred             eccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCC---cEEeeeeEeec-CCceEEEEEecC
Confidence            67889999999987 555 677788764      2456788899998888642   24444443332 468899999987


Q ss_pred             CCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHH
Q 020393          129 FGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHR  208 (326)
Q Consensus       129 G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  208 (326)
                      -..           |.++|+...+.                    .+.-..++.                        .+
T Consensus       102 ~~s-----------L~el~Krrk~l--------------------tEpEary~l------------------------~Q  126 (592)
T KOG0575|consen  102 RGS-----------LMELLKRRKPL--------------------TEPEARYFL------------------------RQ  126 (592)
T ss_pred             Ccc-----------HHHHHHhcCCC--------------------CcHHHHHHH------------------------HH
Confidence            542           66777744321                    011111111                        22


Q ss_pred             HHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          209 LMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       209 l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ++..+. ++    ...++||.||+.||++++++-.+-|=||.
T Consensus       127 Iv~Glk-YL----H~~~IiHRDLKLGNlfL~~~~~VKIgDFG  163 (592)
T KOG0575|consen  127 IVEGLK-YL----HSLGIIHRDLKLGNLFLNENMNVKIGDFG  163 (592)
T ss_pred             HHHHHH-HH----HhcCceecccchhheeecCcCcEEecccc
Confidence            222222 22    23479999999999999887668888874

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=96.74  E-value=0.026  Score=49.85  Aligned_cols=73  Identities=15%  Similarity=0.057  Sum_probs=41.8

Q ss_pred             EeCCccccceEEEEeCC--------------ccEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           56 PVGGGCINLASRYGTDA--------------GSFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--------------~~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      .++.|..+.+|+-+...              -.+++|.......   ..+..|...++.+..   -.+.+++..... ..
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h---p~iv~~~~~~~~-~~   77 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH---KHIVLLYGVCVR-DV   77 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CC
Confidence            46777888888875321              1467787654222   233445555544432   234445544332 45


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|..+
T Consensus        78 ~~~lv~e~~~~~~l   91 (262)
T cd05077          78 ENIMVEEFVEFGPL   91 (262)
T ss_pred             CCEEEEecccCCCH
Confidence            78999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA02988 hypothetical protein; Provisional

Probab=96.74  E-value=0.019  Score=51.49  Aligned_cols=75  Identities=11%  Similarity=0.007  Sum_probs=50.7

Q ss_pred             eEeCCccccceEEEEeCCccEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEEEEe
Q 020393           55 CPVGGGCINLASRYGTDAGSFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIME  125 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~e  125 (326)
                      ..+++|....+|+-..++..+++|......      ...+..|..++..+..  + .+.+++.....  . ....+++||
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCceEEEEE
Confidence            446677778899988877789999876421      1345578888887753  2 45555544221  1 246789999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+.+
T Consensus       103 y~~~g~L  109 (283)
T PHA02988        103 YCTRGYL  109 (283)
T ss_pred             eCCCCcH
Confidence            9999765

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=96.73  E-value=0.015  Score=53.93  Aligned_cols=75  Identities=12%  Similarity=0.127  Sum_probs=45.7

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      ..++.++.|..+.+|++...  +..+++|.....  .   ...+..|..+++.+...   .+.+++......     ...
T Consensus        19 ~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          19 QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHK---NIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             EEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCC---CCcceeeeeccCCCccccCc
Confidence            44677888999999998763  347899986431  1   12344577777766432   233444321110     135


Q ss_pred             eEEEEeeecC
Q 020393          120 SYIIMEFIEF  129 (326)
Q Consensus       120 ~~~v~e~l~G  129 (326)
                      .+++||+++|
T Consensus        96 ~~lv~e~~~~  105 (353)
T cd07850          96 VYLVMELMDA  105 (353)
T ss_pred             EEEEEeccCC
Confidence            7999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=96.72  E-value=0.034  Score=49.55  Aligned_cols=27  Identities=22%  Similarity=0.175  Sum_probs=23.4

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||++++++..-++|+.
T Consensus       128 ~~iiH~dlkp~nili~~~~~~kl~Dfg  154 (279)
T cd05111         128 HRMVHRNLAARNILLKSDSIVQIADFG  154 (279)
T ss_pred             CCEeccccCcceEEEcCCCcEEEcCCc
Confidence            358999999999999988777889963

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=96.71  E-value=0.01  Score=53.45  Aligned_cols=75  Identities=13%  Similarity=0.146  Sum_probs=44.9

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ...++.|..+.+|++...  +..+++|......   ...+..|...++.+..   ..+..++..... .+..+++||+++
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~ii~~~~~~~~-~~~~~lv~e~~~  102 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH---ENVVDMYNSYLV-GDELWVVMEFLE  102 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC---CcHHHHHHheec-CCeEEEEEeCCC
Confidence            355778888899998753  3478888764321   2334566666665532   123333322211 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus       103 ~~~L  106 (292)
T cd06658         103 GGAL  106 (292)
T ss_pred             CCcH
Confidence            8654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=96.71  E-value=0.046  Score=48.28  Aligned_cols=76  Identities=18%  Similarity=0.071  Sum_probs=47.4

Q ss_pred             eeEeEeCCccccceEEEEeCC-----ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      +-.+.++.|..+.+|+....+     ..+++|......    ...+..|...++.+..   -.+.+.+....  ++..++
T Consensus         9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~--~~~~~l   83 (270)
T cd05056           9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH---PHIVKLIGVIT--ENPVWI   83 (270)
T ss_pred             eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC---CchhceeEEEc--CCCcEE
Confidence            334667888888999976432     257888876432    2345567777666642   23444443322  356789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus        84 v~e~~~~~~L   93 (270)
T cd05056          84 VMELAPLGEL   93 (270)
T ss_pred             EEEcCCCCcH
Confidence            9999987655

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=96.71  E-value=0.016  Score=52.10  Aligned_cols=73  Identities=19%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -.+.++.|..+.+|++... ++ .+++|......     ...+..|.+.++.+..   -.+++++..... .+..+++||
T Consensus         6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e   81 (294)
T PLN00009          6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH---GNIVRLQDVVHS-EKRLYLVFE   81 (294)
T ss_pred             EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC---CCEeeEEEEEec-CCeEEEEEe
Confidence            3466788888999998754 33 78999875321     2345678887777743   235556654433 468999999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      |+++
T Consensus        82 ~~~~   85 (294)
T PLN00009         82 YLDL   85 (294)
T ss_pred             cccc
Confidence            9864

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=96.70  E-value=0.013  Score=53.20  Aligned_cols=75  Identities=17%  Similarity=0.112  Sum_probs=46.0

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      ..++.++.|....+|+....  +..+++|......     ......|..+++.+...   .+.+++..-... .+..+++
T Consensus        10 ~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~~~~~~~~~lv   86 (309)
T cd07845          10 EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP---NIVELKEVVVGKHLDSIFLV   86 (309)
T ss_pred             eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCC---CCcceEEEEecCCCCeEEEE
Confidence            34556788888999998763  3368888765311     12244688888777542   233344332111 2467999


Q ss_pred             EeeecC
Q 020393          124 MEFIEF  129 (326)
Q Consensus       124 ~e~l~G  129 (326)
                      ||+.++
T Consensus        87 ~e~~~~   92 (309)
T cd07845          87 MEYCEQ   92 (309)
T ss_pred             EecCCC
Confidence            999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=96.69  E-value=0.018  Score=50.23  Aligned_cols=76  Identities=16%  Similarity=0.078  Sum_probs=48.3

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -++.++.|..+.+|++...  ...+++|.....     ....+..|.+.++.+..   -.+.+++..... ++..+++||
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~lv~e   79 (256)
T cd08220           4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH---PNIIEYYENFLE-DKALMIVME   79 (256)
T ss_pred             EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC---CchhheeeeEec-CCEEEEEEe
Confidence            3566788888899987653  347888876432     12345667777776642   123334432221 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|..+
T Consensus        80 ~~~~~~L   86 (256)
T cd08220          80 YAPGGTL   86 (256)
T ss_pred             cCCCCCH
Confidence            9998755

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=96.67  E-value=0.0086  Score=55.26  Aligned_cols=27  Identities=30%  Similarity=0.424  Sum_probs=24.1

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||+++.++...|+|+.
T Consensus       137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg  163 (343)
T cd07878         137 AGIIHRDLKPSNVAVNEDCELRILDFG  163 (343)
T ss_pred             CCeecccCChhhEEECCCCCEEEcCCc
Confidence            479999999999999988888899974

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=96.67  E-value=0.0074  Score=53.22  Aligned_cols=74  Identities=14%  Similarity=0.044  Sum_probs=46.2

Q ss_pred             eEeCCccccceEEEEe--CCccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           55 CPVGGGCINLASRYGT--DAGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +.++.|..+.+|+...  ++..+++|.....      ....+..|...++.+..   -.+++++..... .+..+++||+
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h---~~i~~~~~~~~~-~~~~~~v~e~   83 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNIVLEL   83 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC---CchhhhhheeEe-CCeEEEEEEe
Confidence            4467788888999885  3347889865421      11234567776666642   224444443322 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        84 ~~~~~L   89 (267)
T cd08229          84 ADAGDL   89 (267)
T ss_pred             cCCCCH
Confidence            998755

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=96.66  E-value=0.017  Score=51.34  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=45.3

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC--Cc--chHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GP--SMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~  126 (326)
                      ++.++.|..+.+|++...  +..+++|.....  +.  .....|...+..+.++  -.+++++...... .+..+++|||
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH--PNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC--CCccceEEEEecCCCCcEEEEEec
Confidence            456788888999999763  336888876532  11  1122466666655433  2355555543331 2678999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      .+|
T Consensus        82 ~~~   84 (282)
T cd07831          82 MDM   84 (282)
T ss_pred             CCc
Confidence            975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.65  E-value=0.043  Score=47.77  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=57.5

Q ss_pred             CcceeeEeEeCCccccceEEEE-eCCc-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           48 ATHITKICPVGGGCINLASRYG-TDAG-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        48 ~~~v~~v~~l~~G~~n~~y~v~-~~~~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +.+..-+++++.|.....|.-. ..+| ++.+|.-+.. ....+..|..+.+.|..  ++-.|.+...+.. .....+||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~--g~GiP~i~~y~~e-~~ynvlVM   90 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQG--GVGIPHIRHYGTE-KDYNVLVM   90 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhcc--CCCCchhhhhccc-cccceeee
Confidence            3367778999999999999853 3444 7889998753 23456789999999975  5667888877643 45778998


Q ss_pred             eeec
Q 020393          125 EFIE  128 (326)
Q Consensus       125 e~l~  128 (326)
                      +-+.
T Consensus        91 dLLG   94 (341)
T KOG1163|consen   91 DLLG   94 (341)
T ss_pred             eccC
Confidence            8663

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=96.63  E-value=0.013  Score=54.18  Aligned_cols=74  Identities=16%  Similarity=0.092  Sum_probs=44.1

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeeccc---CC--C
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PT--G  118 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~~--~  118 (326)
                      -..+..++.|..+.+|++... ++ .+++|.....  .   ...+..|.+.++.+....   +.+++.....   ..  .
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~---iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHEN---VIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             eEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCC---ccceeeeecCCccccccc
Confidence            445678899999999998753 33 7888876421  1   123456888777775321   2233322111   01  2


Q ss_pred             ceEEEEeee
Q 020393          119 GSYIIMEFI  127 (326)
Q Consensus       119 ~~~~v~e~l  127 (326)
                      ..+++|+++
T Consensus        94 ~~~lv~e~~  102 (343)
T cd07880          94 DFYLVMPFM  102 (343)
T ss_pred             eEEEEEecC
Confidence            458999988

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=96.62  E-value=0.014  Score=56.89  Aligned_cols=36  Identities=22%  Similarity=0.292  Sum_probs=27.1

Q ss_pred             CcceeecCCCCCCeeecCCC--CeEEEccc--cccCchhh
Q 020393          223 EPCLLHGDLWSGNISSDKNG--EPVILDPA--CYYGHNEA  258 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~--~~~iID~~--~~~G~~~~  258 (326)
                      ...|||+||+|.|||+-+-+  ..-||||.  |+.+...+
T Consensus       307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy  346 (586)
T KOG0667|consen  307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY  346 (586)
T ss_pred             hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence            45899999999999996543  35799984  45666555

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=96.62  E-value=0.013  Score=52.66  Aligned_cols=76  Identities=12%  Similarity=0.073  Sum_probs=44.5

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      ..-++.++.|..+.+|++...  +..+++|......    ...+..|...+..+..+  -.+++++..... .+..+++|
T Consensus        17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~v~   93 (296)
T cd06618          17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDC--PYIVKCYGYFIT-DSDVFICM   93 (296)
T ss_pred             heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCC--CchHhhheeeec-CCeEEEEe
Confidence            344667888889999999876  3478888875321    11122344333333222  234455544322 46789999


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      |++++
T Consensus        94 e~~~~   98 (296)
T cd06618          94 ELMST   98 (296)
T ss_pred             eccCc
Confidence            98754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PTZ00036 glycogen synthase kinase; Provisional

Probab=96.62  E-value=0.016  Score=55.66  Aligned_cols=75  Identities=13%  Similarity=-0.001  Sum_probs=45.7

Q ss_pred             eeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceee---ecccC--C--CceE
Q 020393           51 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFK---VGALP--T--GGSY  121 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~---~~~~~--~--~~~~  121 (326)
                      -.-.+.++.|..+.||+.... . ..+.+|..... ......|..+++.+...   .+.+++.   .....  .  ...+
T Consensus        68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l~h~---niv~l~~~~~~~~~~~~~~~~~l~  143 (440)
T PTZ00036         68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNLNHI---NIIFLKDYYYTECFKKNEKNIFLN  143 (440)
T ss_pred             EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhcCCC---CCcceeeeEeecccccCCCceEEE
Confidence            445667888999999998763 2 36888876432 23345688888877532   2333322   11111  1  2356


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      ++|||++|
T Consensus       144 lvmE~~~~  151 (440)
T PTZ00036        144 VVMEFIPQ  151 (440)
T ss_pred             EEEecCCc
Confidence            89999986

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=96.57  E-value=0.044  Score=48.42  Aligned_cols=75  Identities=21%  Similarity=0.124  Sum_probs=46.5

Q ss_pred             EeEeCCccccceEEEEeC----Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           54 ICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .+.++.|....||+....    .+ .+.+|..... .   ...+..|...++.+..   -.+++++..... .+..+++|
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~   85 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH---SNIVRLEGVITR-GNTMMIVT   85 (266)
T ss_pred             eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEec-CCCcEEEE
Confidence            455788889999987542    12 5667776532 1   1234556666655532   235555554332 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus        86 e~~~~~~L   93 (266)
T cd05064          86 EYMSNGAL   93 (266)
T ss_pred             EeCCCCcH
Confidence            99998755

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=96.56  E-value=0.026  Score=50.46  Aligned_cols=73  Identities=14%  Similarity=0.096  Sum_probs=45.2

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.++.|..+.+|++...  +..+.+|......    ...+..|...+..+..+  -.+++++..... ++..+++|+++
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~~~~~~~~-~~~~~~~~e~~   85 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC--PYIVKFYGALFR-EGDCWICMELM   85 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC--CCEeeeeeEEec-CCcEEEEEecc
Confidence            345777888899998763  2368888765321    22345666666655432  235555554332 56789999987


Q ss_pred             cC
Q 020393          128 EF  129 (326)
Q Consensus       128 ~G  129 (326)
                      ++
T Consensus        86 ~~   87 (288)
T cd06616          86 DI   87 (288)
T ss_pred             cC
Confidence            64

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.56  E-value=0.0045  Score=55.73  Aligned_cols=65  Identities=14%  Similarity=0.028  Sum_probs=43.9

Q ss_pred             cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCCCcHHHHHHHHHHHhhcC
Q 020393           74 SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGNQSVFGKKLAEMHKAG  150 (326)
Q Consensus        74 ~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~~~~~~lg~~La~lH~~~  150 (326)
                      +|.||+-..   ..+..+-.|++.+..-..+  ..+-+++.+-.+ +...|+|||.+.|+++          |..||...
T Consensus       105 EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh--~nilqLiefFEd-d~~FYLVfEKm~GGpl----------LshI~~~~  171 (463)
T KOG0607|consen  105 EYAVKIIDKQPGHSRSRVFREVETFYQCQGH--KNILQLIEFFED-DTRFYLVFEKMRGGPL----------LSHIQKRK  171 (463)
T ss_pred             hhhhhhhhcCCchHHHHHHHHHHHHHHhcCC--ccHHHHHHHhcc-cceEEEEEecccCchH----------HHHHHHhh
Confidence            677777543   3455566788877665544  334455544332 5799999999999887          88888766


Q ss_pred             C
Q 020393          151 K  151 (326)
Q Consensus       151 ~  151 (326)
                      .
T Consensus       172 ~  172 (463)
T KOG0607|consen  172 H  172 (463)
T ss_pred             h
Confidence            4

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=96.56  E-value=0.046  Score=48.22  Aligned_cols=74  Identities=14%  Similarity=-0.002  Sum_probs=47.8

Q ss_pred             eEeCCccccceEEEEeCC-c-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTDA-G-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      ..++.|....+|+....+ + .+++|......   ...+..|...++.+..   ..+.+++..... .+..++++|+++|
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~~   89 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH---RNIVQYLGSDSE-NGFFKIFMEQVPG   89 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC---CCeeeeeeeecc-CCEEEEEEecCCC
Confidence            457888889999997543 3 68888765422   2345667777766643   223444444332 4688999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus        90 ~~L   92 (268)
T cd06624          90 GSL   92 (268)
T ss_pred             CCH
Confidence            755

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=96.56  E-value=0.025  Score=50.38  Aligned_cols=55  Identities=16%  Similarity=0.109  Sum_probs=30.6

Q ss_pred             cEEEEecCCCCc---chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           74 SFFVKTNRSIGP---SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        74 ~~vlK~~~~~~~---~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .+++|.......   ..+..|+.+++.+..   ..+++++..... .+..++||||++|.++
T Consensus        46 ~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h---~niv~~~~~~~~-~~~~~lv~ey~~~g~L  103 (274)
T cd05076          46 RVVLKVLDPSHRDIALAFFETASLMSQVSH---IHLAFVHGVCVR-GSENIMVEEFVEHGPL  103 (274)
T ss_pred             eEEEEecChHHHHHHHHHHHHHHHHhcCCC---CCeeeEEEEEEe-CCceEEEEecCCCCcH
Confidence            366777653211   123344444443332   235556655432 4688999999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=96.55  E-value=0.016  Score=53.24  Aligned_cols=76  Identities=13%  Similarity=0.080  Sum_probs=43.9

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.++.|....+|++...  +..|++|.....     ....+..|..+++.+....-+.+...+.......+..+++|+|
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~   89 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL   89 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence            456788888899998764  347888876432     1223456777777775321112222222211113467999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      +.|
T Consensus        90 ~~~   92 (334)
T cd07855          90 MES   92 (334)
T ss_pred             hhh
Confidence            865

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.54  E-value=0.02  Score=55.93  Aligned_cols=27  Identities=30%  Similarity=0.246  Sum_probs=24.1

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.|||++.++...|+|+.
T Consensus       162 ~~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        162 KHMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             CCEecCCCCHHHEEEeCCCCEEEEecc
Confidence            479999999999999988888899974

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=96.54  E-value=0.011  Score=54.08  Aligned_cols=72  Identities=13%  Similarity=0.118  Sum_probs=42.9

Q ss_pred             eCCc--cccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           57 VGGG--CINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        57 l~~G--~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.|  ....+|++... ++ .+.+|......     ...+..|..+++.+..   -.+.+++..... ++..++|||++
T Consensus         6 ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~~   81 (327)
T cd08227           6 IGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNELWVVTSFM   81 (327)
T ss_pred             ccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEEE-CCEEEEEEecc
Confidence            4555  45678887653 34 57778765321     1335567777766642   234444443322 56889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        82 ~~~~l   86 (327)
T cd08227          82 AYGSA   86 (327)
T ss_pred             CCCcH
Confidence            98654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=96.52  E-value=0.018  Score=51.92  Aligned_cols=75  Identities=13%  Similarity=0.144  Sum_probs=47.1

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ...++.|..+.+|+.... + ..+++|.....   ....+..|...++.+..   -.+++++..... .+..+++||+++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~  100 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVMEFLE  100 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC---cchhheeeEEEe-CCEEEEEEecCC
Confidence            355778888899988763 3 36888876431   12335567776666643   234444433222 468899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |..+
T Consensus       101 ~~~L  104 (292)
T cd06657         101 GGAL  104 (292)
T ss_pred             CCcH
Confidence            8754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=96.52  E-value=0.018  Score=51.29  Aligned_cols=74  Identities=11%  Similarity=0.004  Sum_probs=43.2

Q ss_pred             eEeCCccccceEEEEeC-------CccEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           55 CPVGGGCINLASRYGTD-------AGSFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +.++.|..+.+|+....       ...+.+|.......    ..+..|..++..+..   -.+.+++..... .+..+++
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~~iv~~~~~~~~-~~~~~~~   86 (283)
T cd05091          11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH---PNIVCLLGVVTK-EQPLSMI   86 (283)
T ss_pred             HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEcC-CCceEEE
Confidence            34566777888887642       12588888764321    234456655554432   124444443332 4578899


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ++|.++..+
T Consensus        87 ~e~~~~~~l   95 (283)
T cd05091          87 FSYCSHSDL   95 (283)
T ss_pred             EEcCCCCcH
Confidence            999987653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=96.48  E-value=0.018  Score=50.06  Aligned_cols=27  Identities=22%  Similarity=0.171  Sum_probs=23.7

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||+++.++...++|+.
T Consensus       104 ~~i~H~dlkp~Nil~~~~~~~~l~df~  130 (237)
T cd05576         104 EGIVCRDLNPNNILLDDRGHIQLTYFS  130 (237)
T ss_pred             CCeeccCCCHHHEEEcCCCCEEEeccc
Confidence            479999999999999988878889863

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.47  E-value=0.023  Score=53.38  Aligned_cols=145  Identities=21%  Similarity=0.119  Sum_probs=85.0

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHH--HhcCCCCCcceeeecccCC---CceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAM--YETRTIRAPRPFKVGALPT---GGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L--~~~~~~~vP~~~~~~~~~~---~~~~~v~  124 (326)
                      +|+=++.+|-|-...|||-...++.+-||++...++....+|.++++..  +..   .+=..+++|....   .+-|+|.
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHE---NILgFIaaD~~~~gs~TQLwLvT  288 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHE---NILGFIAADNKDNGSWTQLWLVT  288 (513)
T ss_pred             eeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccc---hhhhhhhccccCCCceEEEEEee
Confidence            4556677899999999999888889999999865555566788877754  221   1222333333212   2568888


Q ss_pred             eeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 020393          125 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  204 (326)
Q Consensus       125 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  204 (326)
                      +|=+.+++              +.....         +.           .+         ....++.+.         .
T Consensus       289 dYHe~GSL--------------~DyL~r---------~t-----------v~---------~~~ml~Lal---------S  316 (513)
T KOG2052|consen  289 DYHEHGSL--------------YDYLNR---------NT-----------VT---------TEGMLKLAL---------S  316 (513)
T ss_pred             ecccCCcH--------------HHHHhh---------cc-----------CC---------HHHHHHHHH---------H
Confidence            88765433              222110         00           00         000011110         0


Q ss_pred             HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      .+.-+....-+++.. +.+|.+-|.||+..||||..++...|=|..
T Consensus       317 ~AsGLaHLH~eI~GT-qgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  317 IASGLAHLHMEIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             HhhhHHHHHHHHhcC-CCCchhhccccccccEEEccCCcEEEeece
Confidence            111122222233332 578999999999999999988877787753

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=96.47  E-value=0.052  Score=55.03  Aligned_cols=74  Identities=16%  Similarity=0.075  Sum_probs=52.5

Q ss_pred             EeCCccccceEEEEe-CCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEEEEeee
Q 020393           56 PVGGGCINLASRYGT-DAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~v~e~l  127 (326)
                      .++.|....+|++.- .++ ...+||-..+  ..+.++.|+++|+.+..+  -.+++.+++....    +++-|+|||++
T Consensus        26 vig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h--pnv~~fyg~~~k~~~~~~DqLWLVMEfC  103 (953)
T KOG0587|consen   26 VIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH--PNVATFYGAFIKKDPGNGDQLWLVMEFC  103 (953)
T ss_pred             EEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC--CCcceEEEEEEEecCCCCCeEEEEeecc
Confidence            355677778888864 233 4677887652  245578899999988765  4678887764322    56899999999


Q ss_pred             cCCC
Q 020393          128 EFGS  131 (326)
Q Consensus       128 ~G~~  131 (326)
                      .|++
T Consensus       104 ~gGS  107 (953)
T KOG0587|consen  104 GGGS  107 (953)
T ss_pred             CCcc
Confidence            9864

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=96.45  E-value=0.025  Score=49.26  Aligned_cols=75  Identities=13%  Similarity=0.003  Sum_probs=47.0

Q ss_pred             EeEeCCccccceEEEEeC-C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.++.|..+.+|++... + ..+++|......     ...+..|...++.+..   ..+++++..... ....+++||+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~-~~~~~~v~e~   80 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH---PNIISYKEAFLD-GNKLCIVMEY   80 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC---CCchhhhhhhcc-CCEEEEEehh
Confidence            456778888899998753 3 378998875321     1223456666665542   235555433322 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        81 ~~~~~L   86 (256)
T cd08530          81 APFGDL   86 (256)
T ss_pred             cCCCCH
Confidence            998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.45  E-value=0.0023  Score=61.90  Aligned_cols=92  Identities=14%  Similarity=0.164  Sum_probs=59.1

Q ss_pred             CCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCCCc------chHHHHHHHHHHHHhcCCC
Q 020393           33 LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIGP------SMFEGEALGLGAMYETRTI  104 (326)
Q Consensus        33 ~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~~~------~~~~~E~~~l~~L~~~~~~  104 (326)
                      +.+.+|.++..+..|.--...+..||.|.+..||.-.....  -+.+|--...+.      ..+-+|+.+|+.|.     
T Consensus        10 lKDPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-----   84 (948)
T KOG0577|consen   10 LKDPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-----   84 (948)
T ss_pred             CCCchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-----
Confidence            56778888887775543346788899999999999876433  333343322111      23557877776664     


Q ss_pred             CCcceeeecc--cCCCceEEEEeeecCC
Q 020393          105 RAPRPFKVGA--LPTGGSYIIMEFIEFG  130 (326)
Q Consensus       105 ~vP~~~~~~~--~~~~~~~~v~e~l~G~  130 (326)
                       -|..+.+..  ..+...|+||||+-|.
T Consensus        85 -HPntieYkgCyLre~TaWLVMEYClGS  111 (948)
T KOG0577|consen   85 -HPNTIEYKGCYLREHTAWLVMEYCLGS  111 (948)
T ss_pred             -CCCcccccceeeccchHHHHHHHHhcc
Confidence             455554432  1256889999999885

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=96.45  E-value=0.024  Score=49.95  Aligned_cols=74  Identities=12%  Similarity=0.087  Sum_probs=46.8

Q ss_pred             eEeCCccccceEEEEe--CCccEEEEecCCCC---------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           55 CPVGGGCINLASRYGT--DAGSFFVKTNRSIG---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +.++.|..+.+|++..  ++..+++|......         ...+..|...++.+...   .+++++..... .+..+++
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~-~~~~~~v   81 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP---HIIRMLGATCE-DSHFNLF   81 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCC---ceehhhceecc-CCeEEEE
Confidence            4567888899999865  23478888765311         12355677777776532   23344433221 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |++.+|.++
T Consensus        82 ~e~~~~~~L   90 (268)
T cd06630          82 VEWMAGGSV   90 (268)
T ss_pred             EeccCCCcH
Confidence            999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=96.37  E-value=0.043  Score=49.59  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=45.4

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCCCc----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSIGP----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~~~----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ...++.++.|..+.+|++... ++     .+++|.......    ..+..|..+++.+..   -.+.+++....  .+..
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~--~~~~   83 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH---PHLVRLLGVCL--SPTI   83 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEc--CCCc
Confidence            445667888999999998752 23     367787654321    124456666555532   22344444332  2456


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      ++++++.+++.+
T Consensus        84 ~~v~e~~~~g~l   95 (303)
T cd05110          84 QLVTQLMPHGCL   95 (303)
T ss_pred             eeeehhcCCCCH
Confidence            788898887544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=96.37  E-value=0.057  Score=47.81  Aligned_cols=78  Identities=19%  Similarity=0.149  Sum_probs=46.5

Q ss_pred             eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..-...++.|..+.+|+.....       ..+.+|......    ...+..|...+..+..   -.+.+++..... .+.
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~   83 (277)
T cd05032           8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC---HHVVRLLGVVST-GQP   83 (277)
T ss_pred             eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC---CceeEEEEEEcC-CCC
Confidence            3445678888889999876532       368889875421    1223445555544422   123344433222 467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+.+|.++
T Consensus        84 ~~~v~e~~~~~~L   96 (277)
T cd05032          84 TLVVMELMAKGDL   96 (277)
T ss_pred             cEEEEecCCCCCH
Confidence            8999999987654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=96.37  E-value=0.023  Score=50.25  Aligned_cols=75  Identities=17%  Similarity=0.150  Sum_probs=45.2

Q ss_pred             eEeCCccccceEEEEeCCc----cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecc--cC---CCce
Q 020393           55 CPVGGGCINLASRYGTDAG----SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP---TGGS  120 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~----~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~--~~---~~~~  120 (326)
                      +.++.|..+.||+....+.    .+.+|.....     ....+..|.+.++.+..   -.+.+++....  ..   ....
T Consensus         5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH---PNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEccCCcccCCCCc
Confidence            3467888899999876432    4777876432     12335567777766642   23555554321  10   2357


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++|+|.+|.++
T Consensus        82 ~~v~e~~~~~~l   93 (272)
T cd05075          82 VVILPFMKHGDL   93 (272)
T ss_pred             EEEEEeCCCCcH
Confidence            899999998654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=96.36  E-value=0.033  Score=50.19  Aligned_cols=76  Identities=11%  Similarity=0.064  Sum_probs=44.9

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeeccc-------C
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------P  116 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-------~  116 (326)
                      ..-.+.++.|....+|++...  +..+++|.....     .......|.+.++.+...   .+.+++.....       .
T Consensus        10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866          10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP---NVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCC---Cccchhhheeccccccccc
Confidence            344566888888999998763  347888876421     112345688888877532   12223221110       0


Q ss_pred             CCceEEEEeeecC
Q 020393          117 TGGSYIIMEFIEF  129 (326)
Q Consensus       117 ~~~~~~v~e~l~G  129 (326)
                      ....+++|+|.++
T Consensus        87 ~~~~~lv~~~~~~   99 (311)
T cd07866          87 RGSVYMVTPYMDH   99 (311)
T ss_pred             CceEEEEEecCCc
Confidence            2356889998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=96.35  E-value=0.082  Score=46.34  Aligned_cols=27  Identities=22%  Similarity=0.139  Sum_probs=23.4

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||++++++...+.|+.
T Consensus       117 ~~i~H~dlk~~nili~~~~~~kl~dfg  143 (262)
T cd05058         117 KKFVHRDLAARNCMLDESFTVKVADFG  143 (262)
T ss_pred             CCccccccCcceEEEcCCCcEEECCcc
Confidence            479999999999999988777888963

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=96.33  E-value=0.026  Score=51.88  Aligned_cols=74  Identities=12%  Similarity=0.108  Sum_probs=42.9

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeee---cccC-CCceEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKV---GALP-TGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~-~~~~~~  122 (326)
                      -.+.++.|..+.+|++...  +..+++|......    ...+..|..+++.+...   .+.+++..   .... ....++
T Consensus         9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l   85 (336)
T cd07849           9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHE---NIIGILDIIRPPSFESFNDVYI   85 (336)
T ss_pred             EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCC---CcCchhheeecccccccceEEE
Confidence            3566788888899998653  3478899875321    12244577777766532   12223222   1110 235689


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +++++++
T Consensus        86 v~e~~~~   92 (336)
T cd07849          86 VQELMET   92 (336)
T ss_pred             Eehhccc
Confidence            9998875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=96.33  E-value=0.018  Score=52.23  Aligned_cols=143  Identities=19%  Similarity=0.179  Sum_probs=80.1

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC-C---C-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS-I---G-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~-~---~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +.+|++|...-|||.... ++ -+.+|.-.. .   . +-.--+|..+|.......-+.|=+|+--..  -+..|+||||
T Consensus        81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~--~d~iy~VMe~  158 (419)
T KOG0663|consen   81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN--MDKIYIVMEY  158 (419)
T ss_pred             HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc--cceeeeeHHH
Confidence            445789999999998753 23 355555432 1   1 111235776665554321122333332221  3578999999


Q ss_pred             ecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHH
Q 020393          127 IEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRG  206 (326)
Q Consensus       127 l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  206 (326)
                      ++-.     .+      +-||....+   |+-                         ...                +-+.
T Consensus       159 ~EhD-----Lk------sl~d~m~q~---F~~-------------------------~ev----------------K~L~  183 (419)
T KOG0663|consen  159 VEHD-----LK------SLMETMKQP---FLP-------------------------GEV----------------KTLM  183 (419)
T ss_pred             HHhh-----HH------HHHHhccCC---Cch-------------------------HHH----------------HHHH
Confidence            9742     11      123443321   320                         000                1122


Q ss_pred             HHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchhh
Q 020393          207 HRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEA  258 (326)
Q Consensus       207 ~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~~  258 (326)
                      .+++..+.-+     ...-++|.||++.|+|....|..-|-||. + .+|.|.-
T Consensus       184 ~QlL~glk~l-----H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k  232 (419)
T KOG0663|consen  184 LQLLRGLKHL-----HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK  232 (419)
T ss_pred             HHHHHHHHHH-----hhceeEecccchhheeeccCCcEEecccchhhhhcCCcc
Confidence            2333333321     24478999999999999988988999984 4 5999943

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=96.30  E-value=0.031  Score=51.10  Aligned_cols=73  Identities=15%  Similarity=0.191  Sum_probs=44.4

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceEE
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~~  122 (326)
                      .+.++.|..+.+|++...+  ..+++|.....     ....+..|...++.+...   .+.+++......    .+..|+
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHE---NIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCc---chhhhhhhhcccCcccccceEE
Confidence            3567888889999998643  47888876532     123466787777777521   233333222111    136799


Q ss_pred             EEeeecC
Q 020393          123 IMEFIEF  129 (326)
Q Consensus       123 v~e~l~G  129 (326)
                      +|+++++
T Consensus        82 v~e~~~~   88 (330)
T cd07834          82 VTELMET   88 (330)
T ss_pred             Eecchhh
Confidence            9998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.30  E-value=0.035  Score=52.65  Aligned_cols=73  Identities=15%  Similarity=0.160  Sum_probs=46.0

Q ss_pred             EeCCccccceEEEEe--CCccEEEEecCCC------------C-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393           56 PVGGGCINLASRYGT--DAGSFFVKTNRSI------------G-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  116 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~--~~~~~vlK~~~~~------------~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~  116 (326)
                      .+|.|....|=+-..  ++.-|-+|+-+..            .     .+....|.++++.|..   ..|-+++..-+++
T Consensus       104 eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H---~nVV~LiEvLDDP  180 (576)
T KOG0585|consen  104 EIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH---PNVVKLIEVLDDP  180 (576)
T ss_pred             hhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC---cCeeEEEEeecCc
Confidence            456666554433322  2235777876431            1     1356789999988864   4577777765444


Q ss_pred             -CCceEEEEeeecCCC
Q 020393          117 -TGGSYIIMEFIEFGS  131 (326)
Q Consensus       117 -~~~~~~v~e~l~G~~  131 (326)
                       ....|+|+||+..+.
T Consensus       181 ~s~~~YlVley~s~G~  196 (576)
T KOG0585|consen  181 ESDKLYLVLEYCSKGE  196 (576)
T ss_pred             ccCceEEEEEeccCCc
Confidence             578999999998654

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=96.30  E-value=0.04  Score=50.60  Aligned_cols=75  Identities=15%  Similarity=0.083  Sum_probs=45.4

Q ss_pred             eeEeEeCCccccceEEEEeC-C-ccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.++.|..+.+|++... + ..+++|.....     ....+..|.++++.+..-   .+.+++..........++++
T Consensus        13 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~~lv~   89 (328)
T cd07856          13 VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHE---NIISLSDIFISPLEDIYFVT   89 (328)
T ss_pred             EEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCC---CeeeEeeeEecCCCcEEEEe
Confidence            34577888889999998754 3 36888865321     123455688777777531   13333333222135788999


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      |+..+
T Consensus        90 e~~~~   94 (328)
T cd07856          90 ELLGT   94 (328)
T ss_pred             ehhcc
Confidence            98743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.30  E-value=0.008  Score=49.93  Aligned_cols=75  Identities=19%  Similarity=0.147  Sum_probs=60.8

Q ss_pred             eeeEeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      +.....++-|+.+-+|.....++..++|..+.++ +..++.|+++|+-++..  -..|++|.++.     .++.|||++|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~--~~~p~vy~yg~-----~~i~me~i~G   96 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGE--GVTPEVYFYGE-----DFIRMEYIDG   96 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhc--CCCceEEEech-----hhhhhhhhcC
Confidence            4445567888999999999888899999988754 56689999999999864  46999999974     4677999999


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus        97 ~~L   99 (201)
T COG2112          97 RPL   99 (201)
T ss_pred             cch
Confidence            765

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=96.29  E-value=0.018  Score=56.00  Aligned_cols=136  Identities=18%  Similarity=0.132  Sum_probs=85.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      ++.-.++||.|.+.+|||-.. -|++-||+...+     ..+.|+.|+.+++.-+..     =-++..+..-.....+|.
T Consensus       393 ev~l~~rIGsGsFGtV~Rg~w-hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~-----NIlLFMG~~~~p~~AIiT  466 (678)
T KOG0193|consen  393 EVLLGERIGSGSFGTVYRGRW-HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE-----NILLFMGACMNPPLAIIT  466 (678)
T ss_pred             Hhhccceeccccccceeeccc-ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh-----hheeeehhhcCCceeeee
Confidence            566678899999999999654 357788877532     235578898887755432     224555533234559999


Q ss_pred             eeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHH
Q 020393          125 EFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQ  204 (326)
Q Consensus       125 e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~  204 (326)
                      .|.+|..+          -.-+|.....   |.                            +...             .+
T Consensus       467 qwCeGsSL----------Y~hlHv~etk---fd----------------------------m~~~-------------id  492 (678)
T KOG0193|consen  467 QWCEGSSL----------YTHLHVQETK---FD----------------------------MNTT-------------ID  492 (678)
T ss_pred             hhccCchh----------hhhccchhhh---hh----------------------------HHHH-------------HH
Confidence            99999865          3334443321   10                            1111             11


Q ss_pred             HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++..+.+. +|    ....+||.||+..||++++|+.+.|=||.
T Consensus       493 IAqQiaqGM~-YL----HAK~IIHrDLKSnNIFl~~~~kVkIgDFG  533 (678)
T KOG0193|consen  493 IAQQIAQGMD-YL----HAKNIIHRDLKSNNIFLHEDLKVKIGDFG  533 (678)
T ss_pred             HHHHHHHhhh-hh----hhhhhhhhhccccceEEccCCcEEEeccc
Confidence            2233333333 22    24589999999999999988767777764

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=96.28  E-value=0.041  Score=50.48  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=44.4

Q ss_pred             EeEeCCccccceEEEEeCC---c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC---CCceE
Q 020393           54 ICPVGGGCINLASRYGTDA---G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~---~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~  121 (326)
                      .+.++.|..+.+|++....   + .+++|..+..  .   ...+..|..+++.+.++  -.+++.+......   ....+
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~~~~~~~~~~   82 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGH--KNITCLYDMDIVFPGNFNELY   82 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCC--CChheeeeeeeeccccCCcEE
Confidence            3457788889999998643   2 6888876531  1   12345688888777544  2344555432111   23567


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      +++++..+
T Consensus        83 ~~~e~~~~   90 (332)
T cd07857          83 LYEELMEA   90 (332)
T ss_pred             EEEecccC
Confidence            77787754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=96.24  E-value=0.024  Score=50.80  Aligned_cols=73  Identities=16%  Similarity=0.102  Sum_probs=43.9

Q ss_pred             EeEeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e  125 (326)
                      +..++.|....+|+..... + .+++|......     ...+..|...+..+..   -.++.++...... .+..+++||
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~lv~e   86 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH---PNIVTVKEVVVGSNLDKIYMVME   86 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC---CCEEEEEEEEEecCCCcEEEEeh
Confidence            3456778888999988643 3 67788764311     1123457777766642   2244444332221 268899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      ++++
T Consensus        87 ~~~~   90 (293)
T cd07843          87 YVEH   90 (293)
T ss_pred             hcCc
Confidence            9975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=96.20  E-value=0.045  Score=49.27  Aligned_cols=77  Identities=17%  Similarity=0.147  Sum_probs=43.8

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeeccc----CCCceE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~----~~~~~~  121 (326)
                      -+..++.|..+.+|+....  ...+++|.....  .   ......|..+++.+....-+++..+......    ..+..+
T Consensus        16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   95 (310)
T cd07865          16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY   95 (310)
T ss_pred             EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence            3566888888999998764  337888876431  1   1223467777777753211222222211111    024569


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      ++||+..+
T Consensus        96 lv~e~~~~  103 (310)
T cd07865          96 LVFEFCEH  103 (310)
T ss_pred             EEEcCCCc
Confidence            99999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=96.19  E-value=0.036  Score=50.23  Aligned_cols=26  Identities=15%  Similarity=0.233  Sum_probs=22.3

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEcc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDP  249 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~  249 (326)
                      ..+||+|++|+||+++.++..-+.|+
T Consensus       120 ~~ivH~dlk~~Nili~~~~~~kl~d~  145 (314)
T cd08216         120 KGFIHRSVKASHILLSGDGKVVLSGL  145 (314)
T ss_pred             CCeecCCCCcceEEEecCCceEEecC
Confidence            36999999999999998777777785

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=96.15  E-value=0.044  Score=58.06  Aligned_cols=73  Identities=19%  Similarity=0.233  Sum_probs=47.1

Q ss_pred             eEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ..++.|....||+.... ++ .+++|...... .....|.+.++.+..   -.+.+++..... .+..++||||++|+.+
T Consensus       696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~l~~l~H---pnIv~~~~~~~~-~~~~~lv~Ey~~~g~L  770 (968)
T PLN00113        696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVN-SIPSSEIADMGKLQH---PNIVKLIGLCRS-EKGAYLIHEYIEGKNL  770 (968)
T ss_pred             cEEccCCCeeEEEEEECCCCcEEEEEEccCCc-cccHHHHHHHhhCCC---CCcceEEEEEEc-CCCCEEEEeCCCCCcH
Confidence            35788888999999863 33 78888765322 122345655555532   235566665433 4678999999998755

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=96.11  E-value=0.048  Score=48.99  Aligned_cols=73  Identities=16%  Similarity=0.159  Sum_probs=43.2

Q ss_pred             EeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC---------C
Q 020393           54 ICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---------T  117 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---------~  117 (326)
                      ...++.|..+.+|+..... + .+++|.....     ....+..|.++++.+..-   .+.+++......         .
T Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~---~i~~~~~~~~~~~~~~~~~~~~   88 (302)
T cd07864          12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR---NIVNLKEIVTDKQDALDFKKDK   88 (302)
T ss_pred             eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC---CeeeeeheecCcchhhhccccC
Confidence            3457778888999988743 3 6777876431     123345677777766421   223333222110         2


Q ss_pred             CceEEEEeeecC
Q 020393          118 GGSYIIMEFIEF  129 (326)
Q Consensus       118 ~~~~~v~e~l~G  129 (326)
                      +..++++|+++|
T Consensus        89 ~~~~lv~e~~~~  100 (302)
T cd07864          89 GAFYLVFEYMDH  100 (302)
T ss_pred             CcEEEEEcccCc
Confidence            367999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=96.11  E-value=0.025  Score=51.81  Aligned_cols=69  Identities=10%  Similarity=0.031  Sum_probs=41.4

Q ss_pred             ccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           60 GCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        60 G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      |..+.+|+....  +..+.+|+.....     ...++.|..+++.+..   -.+.+++..... .+..++++++++|.++
T Consensus        11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h---~niv~~~~~~~~-~~~~~~v~e~~~~~~l   86 (328)
T cd08226          11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH---PNIMTSWTVFTT-GSWLWVISPFMAYGSA   86 (328)
T ss_pred             cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCcceEeeeEec-CCceEEEEecccCCCH
Confidence            366789998763  3478888875321     1335566665555542   124444444332 4678999999988644

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=96.09  E-value=0.031  Score=49.18  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=43.1

Q ss_pred             EeCCccccceEEEEeCC-c--------cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           56 PVGGGCINLASRYGTDA-G--------SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~-~--------~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .++.|..+.||+..... +        ++++|......   .+.+..|...++.+..   -.+.+++..... .+..+++
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h---~~iv~~~~~~~~-~~~~~lv   77 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH---KHLVLNYGVCVC-GDESIMV   77 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC---CChhheeeEEEe-CCCcEEE
Confidence            46778889999986532 1        36667654322   1234456655555432   224444444332 4578999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|..+
T Consensus        78 ~e~~~~g~L   86 (258)
T cd05078          78 QEYVKFGSL   86 (258)
T ss_pred             EecCCCCcH
Confidence            999998755

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PHA03210 serine/threonine kinase US3; Provisional

Probab=96.08  E-value=0.0078  Score=58.93  Aligned_cols=27  Identities=30%  Similarity=0.278  Sum_probs=24.2

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..+||+|++|.|||++.++...|+|+.
T Consensus       286 ~gIiHrDLKP~NILl~~~~~vkL~DFG  312 (501)
T PHA03210        286 KKLIHRDIKLENIFLNCDGKIVLGDFG  312 (501)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEEeCC
Confidence            479999999999999988888899974

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.05  E-value=0.029  Score=55.81  Aligned_cols=27  Identities=26%  Similarity=0.328  Sum_probs=22.9

Q ss_pred             cceeecCCCCCCeeecCC-CCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKN-GEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~-~~~~iID~~  250 (326)
                      ..+||+|++|.|||++++ +...|+||.
T Consensus       274 ~gIiHRDLKP~NILl~~~~~~~KL~DFG  301 (566)
T PLN03225        274 TGIVHRDVKPQNIIFSEGSGSFKIIDLG  301 (566)
T ss_pred             CCEEeCcCCHHHEEEeCCCCcEEEEeCC
Confidence            479999999999999864 567899974

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=96.05  E-value=0.097  Score=46.16  Aligned_cols=75  Identities=17%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             EeEeCCccccceEEEEeC------CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           54 ICPVGGGCINLASRYGTD------AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~------~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ...++.|....+|+.+..      ...+++|..... .   ...+..|.+.++.+ ++  -.+.++++.... .+..++|
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h--~ni~~~~g~~~~-~~~~~lv   79 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RH--PNIVKLYGFCIE-NEPLFLV   79 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SB--TTBE-EEEEEES-SSSEEEE
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cc--cccccccccccc-ccccccc
Confidence            456888999999998876      226888988542 1   24466677777766 32  246666665442 4568999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      +|+.+++++
T Consensus        80 ~e~~~~g~L   88 (259)
T PF07714_consen   80 MEYCPGGSL   88 (259)
T ss_dssp             EE--TTEBH
T ss_pred             ccccccccc
Confidence            999987654

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.04  E-value=0.11  Score=47.85  Aligned_cols=76  Identities=14%  Similarity=0.180  Sum_probs=55.5

Q ss_pred             eeEeEeCCccccceEEEEeCCc---cEEEEecCCC---CcchHHHHHHHHHHHHh-cCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTDAG---SFFVKTNRSI---GPSMFEGEALGLGAMYE-TRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~---~~vlK~~~~~---~~~~~~~E~~~l~~L~~-~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-...++.|..+.+|.+...+.   .+++|.-...   ....+..|..++..+.. .....+|.++..+...++..|+||
T Consensus        21 ~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM  100 (322)
T KOG1164|consen   21 KLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVM  100 (322)
T ss_pred             EEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEE
Confidence            3456688999999999986543   5888887542   12267889999999974 224579999988842256889998


Q ss_pred             eee
Q 020393          125 EFI  127 (326)
Q Consensus       125 e~l  127 (326)
                      +-+
T Consensus       101 ~l~  103 (322)
T KOG1164|consen  101 SLL  103 (322)
T ss_pred             ecc
Confidence            866

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=96.02  E-value=0.0041  Score=53.52  Aligned_cols=105  Identities=14%  Similarity=0.111  Sum_probs=61.6

Q ss_pred             ccccccccCCCchhHHHHHH-hc-C--CCc--ceeeEeEeCCccccceEEEE--eCCccEEEEecCCCCcchHHHHHHHH
Q 020393           24 FSKRRTFATLSDDPIREWIL-SE-G--KAT--HITKICPVGGGCINLASRYG--TDAGSFFVKTNRSIGPSMFEGEALGL   95 (326)
Q Consensus        24 ~~~~~~~~~~~~~~i~~~l~-~~-~--~~~--~v~~v~~l~~G~~n~~y~v~--~~~~~~vlK~~~~~~~~~~~~E~~~l   95 (326)
                      +|.-+|||.++..--+++-. +. -  -|.  .-.=+..+|.|-.+.||.-.  +++.+.|+|+-.+.-...+..|..+|
T Consensus         7 ~s~ARvya~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL   86 (338)
T KOG0668|consen    7 PSVARVYADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKIL   86 (338)
T ss_pred             chhhhhhhhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHH
Confidence            45567888888766554432 11 0  110  11124457888888888754  45668999998775566788999999


Q ss_pred             HHHHhcCCCCCcceeeecccC-CCceEEEEeeecCC
Q 020393           96 GAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEFG  130 (326)
Q Consensus        96 ~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~  130 (326)
                      +-|...  -.+-+++..-.++ ...+.+++|++...
T Consensus        87 ~nL~gg--~NIi~L~DiV~Dp~SktpaLiFE~v~n~  120 (338)
T KOG0668|consen   87 QNLRGG--PNIIKLLDIVKDPESKTPSLIFEYVNNT  120 (338)
T ss_pred             HhccCC--CCeeehhhhhcCccccCchhHhhhhccc
Confidence            998742  2222232221211 23556666666543

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=96.02  E-value=0.09  Score=51.46  Aligned_cols=27  Identities=22%  Similarity=0.318  Sum_probs=23.9

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||+++.++...|+|+.
T Consensus       328 ~~ivHrDLKp~NILl~~~~~~kL~DFG  354 (507)
T PLN03224        328 IGIVHRDIKPENLLVTVDGQVKIIDFG  354 (507)
T ss_pred             CCeecCCCchHhEEECCCCcEEEEeCc
Confidence            469999999999999988878899974

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=96.00  E-value=0.03  Score=52.67  Aligned_cols=29  Identities=31%  Similarity=0.337  Sum_probs=22.1

Q ss_pred             CCcceeecCCCCCCeeecCCCC---eEEEccc
Q 020393          222 VEPCLLHGDLWSGNISSDKNGE---PVILDPA  250 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~---~~iID~~  250 (326)
                      ..+.+||-||+|+|||+..+..   .-|-||.
T Consensus       587 ikpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  587 IKPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             cCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            5789999999999999976543   3456653

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=95.97  E-value=0.046  Score=49.56  Aligned_cols=74  Identities=9%  Similarity=-0.050  Sum_probs=43.8

Q ss_pred             eEeEeCCccccceEEEEeCC--ccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .+..++.|..+.+|++....  ..+++|.....   .   ...+..|.+.++.+...   .+.+++..... ....+++|
T Consensus        19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~-~~~~~lv~   94 (308)
T cd06634          19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP---NTIQYRGCYLR-EHTAWLVM   94 (308)
T ss_pred             HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC---CcccEEEEEEc-CCeeEEEE
Confidence            34567778888999987632  36778876421   1   12234577666666432   23333332222 46789999


Q ss_pred             eeecCC
Q 020393          125 EFIEFG  130 (326)
Q Consensus       125 e~l~G~  130 (326)
                      |++.|.
T Consensus        95 e~~~~~  100 (308)
T cd06634          95 EYCLGS  100 (308)
T ss_pred             EccCCC
Confidence            999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.97  E-value=0.0036  Score=55.40  Aligned_cols=71  Identities=17%  Similarity=0.119  Sum_probs=43.4

Q ss_pred             EeCCccccceEEEEe-CCcc-EEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecc---cCCCc-eEEEE
Q 020393           56 PVGGGCINLASRYGT-DAGS-FFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGA---LPTGG-SYIIM  124 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~-~~~~-~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~~~~~-~~~v~  124 (326)
                      .+|.|.++.+|++++ .+|. +.+|--...     .+..+..|..+|+.|.      -|.++.+..   ..++. -+++|
T Consensus        26 ~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~------HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   26 KIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN------HPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC------CchHHHHHHHhhhccchhhHHHH
Confidence            367889999999987 4554 455533221     2345667888777764      345554321   11333 68899


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+.+++++
T Consensus       100 E~c~~GDL  107 (375)
T KOG0591|consen  100 ELCDAGDL  107 (375)
T ss_pred             HhhcccCH
Confidence            99887643

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=95.92  E-value=0.06  Score=49.48  Aligned_cols=73  Identities=12%  Similarity=0.083  Sum_probs=43.1

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~  126 (326)
                      +.++.|....+|+....  +..+++|....     .....+..|...++.+..+  -.+.+++...... ....+++||+
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~ni~~~~~~~~~~~~~~~~lv~e~   90 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH--PNIVKLLNVIKAENDKDIYLVFEY   90 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC--CCccceeeeeccCCCceEEEEecc
Confidence            34667777889988653  33688885532     1123355688888888333  2234444432211 2357999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        91 ~~~   93 (337)
T cd07852          91 MET   93 (337)
T ss_pred             ccc
Confidence            975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=95.91  E-value=0.021  Score=53.81  Aligned_cols=75  Identities=15%  Similarity=0.065  Sum_probs=50.4

Q ss_pred             eEeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           55 CPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +.++.|....||+..... | .|-+|.-...      ....+..|+.+|+.|..+  -.+-.+...-.+ ....++|||.
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h--pniv~l~~~~e~-~~~~~lvmEL  117 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH--PNIVQLKDAFED-PDSVYLVMEL  117 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC--CCEEEEEEEEEc-CCeEEEEEEe
Confidence            568899999999988644 4 5666665431      124678999999999753  122222222222 4578999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      +.|+.+
T Consensus       118 ~~GGeL  123 (382)
T KOG0032|consen  118 CEGGEL  123 (382)
T ss_pred             cCCchH
Confidence            998754

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=95.90  E-value=0.054  Score=46.32  Aligned_cols=66  Identities=14%  Similarity=0.028  Sum_probs=42.1

Q ss_pred             cceEEEEeCC--ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           63 NLASRYGTDA--GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        63 n~~y~v~~~~--~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ..+|+....+  ..+++|......    ...+..|.+.++.+..   -.+++++..... ....++++|++++.++
T Consensus         3 g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~-~~~~~l~~e~~~~~~L   74 (244)
T smart00220        3 GKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH---PNIVRLYDVFED-EDKLYLVMEYCDGGDL   74 (244)
T ss_pred             eEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC---CcHHHHHhheee-CCEEEEEEeCCCCCCH
Confidence            4678877653  478999986532    3456677777776632   234444443322 3688999999998644

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=95.87  E-value=0.11  Score=46.20  Aligned_cols=76  Identities=12%  Similarity=0.051  Sum_probs=46.8

Q ss_pred             EeEeCCccccceEEEEeCC------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           54 ICPVGGGCINLASRYGTDA------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .+.++.|....+|+....+      ..+++|......    ...+..|...++.+..   ..+.+++..........+++
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h---~ni~~~~~~~~~~~~~~~~~   87 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH---QNILPILHVCIEDGEPPFVL   87 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEecCCCCCEEE
Confidence            3557888889999987643      367777765321    2334567766666632   23444555433223578999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      +++.++.++
T Consensus        88 ~~~~~~~~L   96 (280)
T cd05043          88 YPYMNWGNL   96 (280)
T ss_pred             EEcCCCCcH
Confidence            999887654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=95.87  E-value=0.031  Score=51.48  Aligned_cols=74  Identities=15%  Similarity=0.152  Sum_probs=43.2

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCceE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~~~  121 (326)
                      -...++.|..+.+|+....  +..+++|.....     ....+..|..+++.+...   .+.+++......    ....+
T Consensus         9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---ni~~~~~~~~~~~~~~~~~~~   85 (337)
T cd07858           9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHE---NVIAIKDIMPPPHREAFNDVY   85 (337)
T ss_pred             EEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCC---CccchHHheecccccccCcEE
Confidence            3557888889999998753  337888876431     122344677777766431   233333211110    13579


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      ++|+++.+
T Consensus        86 lv~e~~~~   93 (337)
T cd07858          86 IVYELMDT   93 (337)
T ss_pred             EEEeCCCC
Confidence            99999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=95.80  E-value=0.081  Score=46.84  Aligned_cols=71  Identities=15%  Similarity=0.130  Sum_probs=44.2

Q ss_pred             eEeCCccccceEEEEeCC--ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           55 CPVGGGCINLASRYGTDA--GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..++.|..+.+|+.....  ..+++|......     ...+..|...++.+..   -.+++++..... .+..++++|+.
T Consensus         5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~i~~~~~~~~~-~~~~~~v~e~~   80 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH---PNIVKLLDVIHT-ERKLYLVFEYC   80 (282)
T ss_pred             hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC---CCHHHHHhhhhc-CCceEEEecCc
Confidence            456778888999987643  478889876421     1234567766666642   223344433322 46889999998


Q ss_pred             cC
Q 020393          128 EF  129 (326)
Q Consensus       128 ~G  129 (326)
                      ++
T Consensus        81 ~~   82 (282)
T cd07829          81 DM   82 (282)
T ss_pred             Cc
Confidence            64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=95.67  E-value=0.083  Score=48.76  Aligned_cols=74  Identities=15%  Similarity=0.088  Sum_probs=43.2

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      ..+..++.|..+.+|+....  +..+++|.....  .   ...+..|..+++.+...   .+.+++......     ...
T Consensus        18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE---NVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCC---CccchhheecccccCCCCce
Confidence            34677888888899998753  347888876431  1   12345677777777432   223333322110     134


Q ss_pred             eEEEEeeec
Q 020393          120 SYIIMEFIE  128 (326)
Q Consensus       120 ~~~v~e~l~  128 (326)
                      .+++++++.
T Consensus        95 ~~lv~e~~~  103 (342)
T cd07879          95 FYLVMPYMQ  103 (342)
T ss_pred             EEEEecccc
Confidence            588888874

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=95.46  E-value=0.039  Score=52.63  Aligned_cols=75  Identities=21%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.++.|.+..|+.-..... ++-+|.-..  .....+..|++++..|...   .+-++++.... ++..++||||++-+
T Consensus       211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~---~lV~l~gV~~~-~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHE---KLVKLYGVCTK-QEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCccc---CeEEEEEEEec-CCceEEEEEecccC
Confidence            34478889999998877654 565665433  2345577899999998753   35566665542 34689999999865


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      .+
T Consensus       287 sL  288 (468)
T KOG0197|consen  287 SL  288 (468)
T ss_pred             cH
Confidence            44

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=95.35  E-value=0.068  Score=49.36  Aligned_cols=27  Identities=33%  Similarity=0.438  Sum_probs=23.8

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||++++++...|+|+.
T Consensus       137 ~gi~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851         137 AGIIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             CCeecCCCCHHHeEECCCCCEEEcccc
Confidence            368999999999999988888899963

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=95.32  E-value=0.13  Score=47.54  Aligned_cols=79  Identities=15%  Similarity=0.124  Sum_probs=47.3

Q ss_pred             CcceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccC------
Q 020393           48 ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP------  116 (326)
Q Consensus        48 ~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~------  116 (326)
                      +.+-.-+++++.|..+.+|+....  +..+++|.....   ....+..|.++++.+...   .+.+++......      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~---~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHD---NIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCC---cchhhHhhhccccccccc
Confidence            334556788899999999998763  337888876432   123355677777766431   233333221110      


Q ss_pred             -------CCceEEEEeeecC
Q 020393          117 -------TGGSYIIMEFIEF  129 (326)
Q Consensus       117 -------~~~~~~v~e~l~G  129 (326)
                             ....+++|||+++
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~  100 (342)
T cd07854          81 DVGSLTELNSVYIVQEYMET  100 (342)
T ss_pred             ccccccccceEEEEeecccc
Confidence                   1346889998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=95.32  E-value=0.15  Score=47.03  Aligned_cols=27  Identities=30%  Similarity=0.409  Sum_probs=23.7

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||++++++...|+|+.
T Consensus       139 ~~ivH~dlkp~NIll~~~~~~kl~dfg  165 (345)
T cd07877         139 ADIIHRDLKPSNLAVNEDCELKILDFG  165 (345)
T ss_pred             CCeeecCCChHHEEEcCCCCEEEeccc
Confidence            369999999999999988878899963

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=95.24  E-value=0.43  Score=40.68  Aligned_cols=77  Identities=13%  Similarity=0.012  Sum_probs=50.6

Q ss_pred             eeEeEeCCccccceEEEEeCCccEEEEecCCCC-------------------cchHHHHHHHHHHHH-hc--CCCCCcce
Q 020393           52 TKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-------------------PSMFEGEALGLGAMY-ET--RTIRAPRP  109 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-------------------~~~~~~E~~~l~~L~-~~--~~~~vP~~  109 (326)
                      .+..+++.|..-.+|.-- .+...++|+..+..                   ......|..-...+. ..  ...++|++
T Consensus         4 ~~~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCCcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            345667777777777743 23467888876543                   345667777777776 33  23578888


Q ss_pred             eeecccCCCceEEEEeeecCC
Q 020393          110 FKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus       110 ~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.-.+ +-+..+|+|.+...
T Consensus        83 ~G~veT-~~G~Glv~e~I~d~  102 (199)
T PF10707_consen   83 YGFVET-NLGLGLVVELIRDA  102 (199)
T ss_pred             eEEEec-CCceEEEEEEEECC
Confidence            887765 44668888888643

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=95.22  E-value=0.029  Score=48.88  Aligned_cols=30  Identities=33%  Similarity=0.490  Sum_probs=26.2

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEcccc
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDPAC  251 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~~  251 (326)
                      ..+...|+|++|+|||+.+++.+.++|+.+
T Consensus       146 ~~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen  146 KEPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             cCCcccccCCCcceeEecCCCceEEEeccC
Confidence            456899999999999999888899999753

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.21  E-value=0.19  Score=49.75  Aligned_cols=148  Identities=18%  Similarity=0.226  Sum_probs=84.4

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +.-+|-|....|+..+..  +.-|-+|.-..+      +......|.+++....++ ++- -.++..-.+ ...-|+|||
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~H-PFL-~~L~~~fQT-~~~l~fvme  449 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRH-PFL-VNLFSCFQT-KEHLFFVME  449 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccC-CeE-eeccccccc-CCeEEEEEE
Confidence            344688999999998874  335777877542      234456788888777643 221 112211122 468899999


Q ss_pred             eecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHH
Q 020393          126 FIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQR  205 (326)
Q Consensus       126 ~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~  205 (326)
                      |+.|+++             +|-....  .|.                 +.-..||..                      
T Consensus       450 y~~Ggdm-------------~~~~~~~--~F~-----------------e~rarfyaA----------------------  475 (694)
T KOG0694|consen  450 YVAGGDL-------------MHHIHTD--VFS-----------------EPRARFYAA----------------------  475 (694)
T ss_pred             ecCCCcE-------------EEEEecc--ccc-----------------HHHHHHHHH----------------------
Confidence            9999753             1211110  121                 111123321                      


Q ss_pred             HHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc-cccCchhhhhhhhhh
Q 020393          206 GHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHNEAEFGMSWC  265 (326)
Q Consensus       206 ~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~~~~Dla~~~~  265 (326)
                        +++-.+. +|    ....+|+.||+.+|||+|.+|..-|.|+. |--|-.--|-+...|
T Consensus       476 --ev~l~L~-fL----H~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfC  529 (694)
T KOG0694|consen  476 --EVVLGLQ-FL----HENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFC  529 (694)
T ss_pred             --HHHHHHH-HH----HhcCceeeecchhheEEcccCcEEecccccccccCCCCCcccccc
Confidence              0111111 22    24589999999999999999999999984 433332333333344

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=95.20  E-value=0.068  Score=49.74  Aligned_cols=92  Identities=12%  Similarity=0.018  Sum_probs=54.4

Q ss_pred             hhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeC----Ccc-EEEE-ecCCCCcchHHHHHHHHHHHHhcCCCCCcc
Q 020393           36 DPIREWILSE-GKATHITKICPVGGGCINLASRYGTD----AGS-FFVK-TNRSIGPSMFEGEALGLGAMYETRTIRAPR  108 (326)
Q Consensus        36 ~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~----~~~-~vlK-~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~  108 (326)
                      +++.+..... +....-..+.+++.|..+.||.-+.-    .++ +-+| ++....+..+..|.+.|..+...  -.|-.
T Consensus        22 ee~~~l~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~--~ni~~   99 (418)
T KOG1167|consen   22 EEIEQLRQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGS--DNIIK   99 (418)
T ss_pred             hHHHHHHhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccc--hhhhc
Confidence            4444444433 22223456788999999999885542    223 4444 44445567788898888877653  12222


Q ss_pred             eeeecccCCCceEEEEeeecCC
Q 020393          109 PFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus       109 ~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      +...-.- .+...+|++|++..
T Consensus       100 ~~~~~rn-nd~v~ivlp~~~H~  120 (418)
T KOG1167|consen  100 LNGCFRN-NDQVAIVLPYFEHD  120 (418)
T ss_pred             chhhhcc-CCeeEEEecccCcc
Confidence            2222211 46889999998764

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=95.13  E-value=0.2  Score=48.39  Aligned_cols=73  Identities=16%  Similarity=0.104  Sum_probs=47.4

Q ss_pred             eeeEeEeCCccccceEEEEe-CCc-cEEEEecC-----CCCcchHHHHHHHHHHHHhcCCCCCcceeee---cccCCCce
Q 020393           51 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNR-----SIGPSMFEGEALGLGAMYETRTIRAPRPFKV---GALPTGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~-----~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~---~~~~~~~~  120 (326)
                      |..-+-++.|++..||--.- ..| .+.+|+-.     ......+++|+++|+.+..      |-++-.   -++ .++.
T Consensus       566 if~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H------PGiV~le~M~ET-~erv  638 (888)
T KOG4236|consen  566 IFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH------PGIVNLECMFET-PERV  638 (888)
T ss_pred             hhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC------CCeeEEEEeecC-CceE
Confidence            33445577889888887432 333 56666542     2345778999999988764      333322   222 4688


Q ss_pred             EEEEeeecCC
Q 020393          121 YIIMEFIEFG  130 (326)
Q Consensus       121 ~~v~e~l~G~  130 (326)
                      |+|||.+.|.
T Consensus       639 FVVMEKl~GD  648 (888)
T KOG4236|consen  639 FVVMEKLHGD  648 (888)
T ss_pred             EEEehhhcch
Confidence            9999999885

>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]

Probab=95.11  E-value=0.072  Score=48.63  Aligned_cols=114  Identities=18%  Similarity=0.216  Sum_probs=60.5

Q ss_pred             cHHHHHHHHHHHhhcCCCC---CCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcC-C----hHHHHHH
Q 020393          135 NQSVFGKKLAEMHKAGKSS---KGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYG-D----STIYQRG  206 (326)
Q Consensus       135 ~~~~lg~~La~lH~~~~~~---~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~-~----~~~~~~~  206 (326)
                      .+..+|..++.+|+...+.   +.||-  .+.       ..-..-|.+.     +...+..+.+... +    ..+.+..
T Consensus       200 ~a~alG~av~~vHsaLA~~sddpafg~--e~~-------ea~v~~w~~R-----la~rls~~~d~l~~p~~ea~~l~~~~  265 (438)
T COG3281         200 EAGALGEAVAEVHSALASCSDDPAFGE--ETD-------EATVEAWADR-----LAERLSEAEDLLRGPAAEAPELLEYA  265 (438)
T ss_pred             HHHHHHHHHHHHHHHHhCCccCccCCC--ccc-------cchHHHHHHH-----HHHHHHHHHhhhhchHHHHHHHHHhh
Confidence            3578999999999998752   22331  100       0111233332     3333333322111 1    1123333


Q ss_pred             HHHHHHhcccccCC-CCCcceeecCCCCCCeeecCCCCeEEEccc--c--------ccCchhhhhhhh
Q 020393          207 HRLMKNLAPLFEGV-NVEPCLLHGDLWSGNISSDKNGEPVILDPA--C--------YYGHNEAEFGMS  263 (326)
Q Consensus       207 ~~l~~~~~~~l~~~-~~~~~LiHgDl~~~NiL~~~~~~~~iID~~--~--------~~G~~~~Dla~~  263 (326)
                      ..+++.++++.... ..-..=+|||||.|.||+.++ ...+|||+  .        ...+|+.|++-+
T Consensus       266 ~Al~q~~q~la~~algg~l~RvHGDLHLgQVLvt~g-~~~liDFEGEPsRpl~err~~~sPlrDvAgl  332 (438)
T COG3281         266 PALLQLFQKLAREALGGVLQRVHGDLHLGQVLVTPG-RALLIDFEGEPSRPLDERRAPDSPLRDVAGL  332 (438)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHhccceehheeeeCC-cEEEEecCCCCCCChhhccCCCCchHHHHHH
Confidence            33444333322211 112345899999999999884 47899963  2        156899999843

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.92  E-value=0.23  Score=46.95  Aligned_cols=72  Identities=13%  Similarity=0.096  Sum_probs=45.4

Q ss_pred             eEeCCccccceEEEEe-CCcc-EEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--CCCceEEEEee
Q 020393           55 CPVGGGCINLASRYGT-DAGS-FFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--PTGGSYIIMEF  126 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~-~~~~-~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~~~~~~~v~e~  126 (326)
                      +.++.|....||+-.+ +.+. +-+|+-.-    .+.+.+++|...++.+.      -|.++.+..+  .+..-|+||.+
T Consensus        32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~------HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID------HPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC------CCCcceEEEEEEecceeEEeehh
Confidence            4577888888999766 3334 44566532    12355677777666543      4666654322  15688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      +.|++.
T Consensus       106 Ma~GS~  111 (516)
T KOG0582|consen  106 MAGGSL  111 (516)
T ss_pred             hcCCcH
Confidence            998653

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=94.83  E-value=0.048  Score=53.07  Aligned_cols=82  Identities=16%  Similarity=0.086  Sum_probs=58.1

Q ss_pred             CCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           47 KATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        47 ~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      +....+=++++++|.+..+-..++..+ .+-+|.-+++    .+..+..|.++|..|+.   -.|-++++.... +....
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh---PNIveLvGVC~~-DePic  611 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH---PNIVELLGVCVQ-DDPLC  611 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCC---CCeeEEEeeeec-CCchH
Confidence            555667778899999999999888775 6777887653    24567889888887742   345566665332 45778


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +|+||.+.+.+
T Consensus       612 mI~EYmEnGDL  622 (807)
T KOG1094|consen  612 MITEYMENGDL  622 (807)
T ss_pred             HHHHHHhcCcH
Confidence            89999886543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=94.31  E-value=0.14  Score=50.51  Aligned_cols=55  Identities=16%  Similarity=0.150  Sum_probs=36.1

Q ss_pred             cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           74 SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        74 ~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ..++|+-+..      ....++.|..+++.|.+   -.|-++|..-.. ...-|+|.||++|+.+
T Consensus        39 laaiKii~k~~~~s~s~~~~IerEIviMkLi~H---pnVl~LydVwe~-~~~lylvlEyv~gGEL   99 (786)
T KOG0588|consen   39 LAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH---PNVLRLYDVWEN-KQHLYLVLEYVPGGEL   99 (786)
T ss_pred             eeEEEeeccccccccccccchhhhhHHHHHhcC---CCeeeeeeeecc-CceEEEEEEecCCchh
Confidence            5677776542      24567889999998864   234444433321 3578999999999754

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=94.29  E-value=0.11  Score=50.71  Aligned_cols=102  Identities=20%  Similarity=0.233  Sum_probs=56.3

Q ss_pred             HHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC-CCeEEEccccccCchhhhhhhhh---hc-C-C-ChHhH--HH
Q 020393          205 RGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN-GEPVILDPACYYGHNEAEFGMSW---CA-G-F-GGSFY--NS  275 (326)
Q Consensus       205 ~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~-~~~~iID~~~~~G~~~~Dla~~~---~~-~-~-~~~fl--~~  275 (326)
                      +-.+++..+. ++.  ...|.+||.||+.+||++.++ |.+-|=|..         ||.+.   .+ . . +++|.  +-
T Consensus       148 W~RQILkGL~-yLH--s~~PPIIHRDLKCDNIFinG~~G~VKIGDLG---------LAtl~r~s~aksvIGTPEFMAPEm  215 (632)
T KOG0584|consen  148 WCRQILKGLV-YLH--SQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG---------LATLLRKSHAKSVIGTPEFMAPEM  215 (632)
T ss_pred             HHHHHHHHhh-hhh--cCCCCccccccccceEEEcCCcCceeecchh---------HHHHhhccccceeccCccccChHH
Confidence            3344444443 233  357899999999999999766 345565532         22221   01 0 1 13343  44


Q ss_pred             hhhhCCCCcCHHHHHHHHHHHHHHHHHHHhcc---CcHHHHHHHHHHHHHHhc
Q 020393          276 YFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGS---GYRSSALSIIDDYLRMLK  325 (326)
Q Consensus       276 Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~  325 (326)
                      |+      +.+-+.+.+|..-+++..+.++.=   .+..+ .+|=+++++..|
T Consensus       216 YE------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-AQIYKKV~SGiK  261 (632)
T KOG0584|consen  216 YE------ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-AQIYKKVTSGIK  261 (632)
T ss_pred             Hh------hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-HHHHHHHHcCCC
Confidence            54      233456789999998877777742   22222 235555554443

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=94.24  E-value=0.06  Score=55.98  Aligned_cols=33  Identities=15%  Similarity=0.114  Sum_probs=24.9

Q ss_pred             eeeEeE-eCCccccceEEEEeCCc-cEEEEecCCC
Q 020393           51 ITKICP-VGGGCINLASRYGTDAG-SFFVKTNRSI   83 (326)
Q Consensus        51 v~~v~~-l~~G~~n~~y~v~~~~~-~~vlK~~~~~   83 (326)
                      -..|+. +|.|....||+.+..+| .++||+..+.
T Consensus       699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~  733 (974)
T KOG1166|consen  699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP  733 (974)
T ss_pred             eEEEEeeeccccceEEEEeecCCCcEEEEEeecCC
Confidence            334444 58888999999998777 6888998753

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=94.16  E-value=0.14  Score=49.84  Aligned_cols=69  Identities=12%  Similarity=0.103  Sum_probs=43.0

Q ss_pred             eEeCCccccceEEEEeCC-ccEE-EEecCCCCcc-----hHHHHHHHHHHHHhcCCCCCcceeeecc-cC-CCceEEEEe
Q 020393           55 CPVGGGCINLASRYGTDA-GSFF-VKTNRSIGPS-----MFEGEALGLGAMYETRTIRAPRPFKVGA-LP-TGGSYIIME  125 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~-~~~v-lK~~~~~~~~-----~~~~E~~~l~~L~~~~~~~vP~~~~~~~-~~-~~~~~~v~e  125 (326)
                      +.+|.|....||+-+... ..|| +|.-....+.     -++.|+++++.|+.      |.++.+-+ .+ ...-|+|.|
T Consensus         8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH------pniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH------PNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC------cchhhHHHhhcccceEEEEeh
Confidence            457889999999976543 2433 3554432222     26778888877753      55554432 11 457799999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      |..|
T Consensus        82 ~a~g   85 (808)
T KOG0597|consen   82 YAVG   85 (808)
T ss_pred             hhhh
Confidence            9877

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=94.08  E-value=0.16  Score=44.42  Aligned_cols=26  Identities=35%  Similarity=0.208  Sum_probs=21.5

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|+.|.||+++++ ...++|+.
T Consensus       125 ~~i~h~~l~~~nili~~~-~~~l~d~g  150 (260)
T cd08222         125 RRILHRDLKAKNIFLKNN-LLKIGDFG  150 (260)
T ss_pred             cCccccCCChhheEeecC-CEeecccC
Confidence            478999999999999754 47788863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function

Probab=94.00  E-value=0.074  Score=50.14  Aligned_cols=60  Identities=20%  Similarity=0.241  Sum_probs=44.5

Q ss_pred             CCCcceeecCCCCCCeeecCCC-CeEEEc---c-ccccCchhhhhhhhh----h----cCCC--------hHhHHHhhhh
Q 020393          221 NVEPCLLHGDLWSGNISSDKNG-EPVILD---P-ACYYGHNEAEFGMSW----C----AGFG--------GSFYNSYFEV  279 (326)
Q Consensus       221 ~~~~~LiHgDl~~~NiL~~~~~-~~~iID---~-~~~~G~~~~Dla~~~----~----~~~~--------~~fl~~Y~~~  279 (326)
                      ..++++|+||+|.+|+=.-.+. ...++|   | ++..|++++||-.+.    .    .+++        ..|+++|.+.
T Consensus        40 ~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si~laa~~~gl~~~~~~~~~~~~~~~Y~~~  119 (385)
T PF10009_consen   40 SGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSIVLAARENGLSDKDARKAVRAFLEGYREA  119 (385)
T ss_pred             CCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            5788999999999999876542 246666   6 589999999997541    1    2443        4688999876


Q ss_pred             C
Q 020393          280 M  280 (326)
Q Consensus       280 ~  280 (326)
                      .
T Consensus       120 l  120 (385)
T PF10009_consen  120 L  120 (385)
T ss_pred             H
Confidence            3

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.98  E-value=0.13  Score=47.07  Aligned_cols=33  Identities=24%  Similarity=0.216  Sum_probs=26.4

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEc-cc-cccCch
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILD-PA-CYYGHN  256 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID-~~-~~~G~~  256 (326)
                      ...|||.|+.--|+|+.++ ++|+|| .. .--.||
T Consensus       402 Ec~LVHADlSEyN~Lw~~g-Kvw~IDVsQsvep~HP  436 (531)
T KOG2269|consen  402 ECLLVHADLSEYNLLWTPG-KVWVIDVSQSVEPSHP  436 (531)
T ss_pred             hhheeecchhhhhheecCC-ceEEEechhccCCCCc
Confidence            4589999999999999887 699999 43 345555

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=93.69  E-value=0.04  Score=50.36  Aligned_cols=49  Identities=8%  Similarity=0.007  Sum_probs=33.6

Q ss_pred             ceeeEeEeCCccccceEEEEe--CCccEEEEecCCCCcchHHHHHHHHHHHH
Q 020393           50 HITKICPVGGGCINLASRYGT--DAGSFFVKTNRSIGPSMFEGEALGLGAMY   99 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~l~~L~   99 (326)
                      .+...+-++.|.++.||+...  +++.+.+|..-++. ..-..|.++|+.+.
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-r~knrEl~im~~l~   75 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-RYKNRELQIMRKLD   75 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-CcCcHHHHHHHhcC
Confidence            345667789999999999765  34578888765432 23346888888443

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=93.57  E-value=0.042  Score=46.79  Aligned_cols=28  Identities=25%  Similarity=0.327  Sum_probs=25.6

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ...+||.|.+|+|||++.+|++-|.||.
T Consensus       167 kL~vIHRDvKPsNiLIn~~GqVKiCDFG  194 (282)
T KOG0984|consen  167 KLSVIHRDVKPSNILINYDGQVKICDFG  194 (282)
T ss_pred             HhhhhhccCCcceEEEccCCcEEEcccc
Confidence            5689999999999999999999999985

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=92.92  E-value=0.91  Score=44.47  Aligned_cols=71  Identities=20%  Similarity=0.203  Sum_probs=41.8

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEccc-c-ccCchhhhhhhhhhcC---CChHhHHHhhhhCCCCcCHHHHHHHHH
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-C-YYGHNEAEFGMSWCAG---FGGSFYNSYFEVMPKQPGFEKRRDLYM  294 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~-~~G~~~~Dla~~~~~~---~~~~fl~~Y~~~~~l~~~~~~r~~~y~  294 (326)
                      ....+||+||+..|+|++.+...-|-|++ + .+..-..+  ..+|+.   -.++++.+-....|-.+-|-...-+|.
T Consensus       172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l--qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~  247 (596)
T KOG0586|consen  172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML--QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA  247 (596)
T ss_pred             hhcceeccccchhhcccccccceeeeccccceeecccccc--cccCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence            35689999999999999988767788863 3 22211111  113422   124566555544554455655555554

>PHA02882 putative serine/threonine kinase; Provisional

Probab=92.87  E-value=0.059  Score=48.53  Aligned_cols=27  Identities=33%  Similarity=0.416  Sum_probs=24.0

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.|||+++++.+.|+||.
T Consensus       145 ~~iiHrDiKp~Nill~~~~~~~l~DFG  171 (294)
T PHA02882        145 HGISHGDIKPENIMVDGNNRGYIIDYG  171 (294)
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence            379999999999999988778899974

>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain

Probab=92.58  E-value=0.43  Score=41.34  Aligned_cols=73  Identities=14%  Similarity=0.092  Sum_probs=48.6

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C---------------
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P---------------  116 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~---------------  116 (326)
                      +...++|..-.+..++++++.+|+|..+..     ..|.-. ..|+...++|+|+.--....  +               
T Consensus         4 ~i~~s~s~~~~~~F~~s~~~a~ViK~s~ti-----~~E~~~-~~La~~LgVpiPq~rvi~~~~~E~~e~~~~L~~a~~~~   77 (238)
T cd05124           4 AIDLSDSGVFGALFVESESGAIVVKSSPNI-----ASEYFL-SKLAKILGLPIPQMRVLEWNSSEFTEMSENLLKASSED   77 (238)
T ss_pred             EEEecCCceEEEEEEcCCCcEEEEEcCccH-----HHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHHHHHHHHhcc
Confidence            344566666667778888889999998642     344432 34566678999986543221  0               


Q ss_pred             -----------CCceEEEEeeecCCCC
Q 020393          117 -----------TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       117 -----------~~~~~~v~e~l~G~~~  132 (326)
                                 ....+++|||++|.++
T Consensus        78 ~~~~~~i~~el~~~~flimeYv~G~~l  104 (238)
T cd05124          78 ECLERRITLELEKAYLLIMEYVPGITL  104 (238)
T ss_pred             hhHHHHHHHHHhhhheeeeeecCCccc
Confidence                       1237999999999986

The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac

>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes

Probab=92.47  E-value=0.73  Score=41.09  Aligned_cols=77  Identities=12%  Similarity=0.136  Sum_probs=39.9

Q ss_pred             ceeeEeEeCCc-cccceEEEEeCCc----cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc---------
Q 020393           50 HITKICPVGGG-CINLASRYGTDAG----SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---------  115 (326)
Q Consensus        50 ~v~~v~~l~~G-~~n~~y~v~~~~~----~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---------  115 (326)
                      .+.++.....| ..+.+|.|.+.++    .+|+|..+.     +..|.-. ..|+...++|+|..--....         
T Consensus        26 ~l~sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t-----~~~E~~~-s~La~~Lgv~~P~~Rii~~~~~E~~e~~~   99 (275)
T PF09192_consen   26 SLSSVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST-----IQQEVFA-SELARWLGVPTPQMRIIESSSSEFQEMSE   99 (275)
T ss_dssp             -CCCEEEEEE-STTS-EEEEEETTE----EEEEE--TT-----HHHHHHH-HHHHHHCT-----EEEEESSSHHHHHHHH
T ss_pred             HhhhHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc-----hHHHHHH-HHHHHHhCCCCCceeeeecCCHHHHHHHH
Confidence            46677777666 3456777777766    799999864     4445443 45666678999875532211         


Q ss_pred             ---------C----------CCceEEEEeeecCCCC
Q 020393          116 ---------P----------TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       116 ---------~----------~~~~~~v~e~l~G~~~  132 (326)
                               +          +...+++|||++|.++
T Consensus       100 ~l~~a~~~~~~l~~~i~~el~~a~~liMeyv~G~~L  135 (275)
T PF09192_consen  100 ALLFATSNDDELGDFICSELDKAFFLIMEYVPGKPL  135 (275)
T ss_dssp             HHH----HH-SSS-HHHHHCT-SEEEEEE---EEES
T ss_pred             HHHhhcccchHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence                     0          2356999999999876

It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=92.31  E-value=1.9  Score=42.44  Aligned_cols=74  Identities=12%  Similarity=0.034  Sum_probs=45.5

Q ss_pred             eeeEeEeCCccccceEEEEeCCc--cEEEEecCCC---------C--cchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           51 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI---------G--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~---------~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      -+.++++|.|....|+.-.....  .+|+|.-...         +  ...+-.|.++|..|.++.--.+-+++..-+. +
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd-d  641 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED-D  641 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec-C
Confidence            46788999999999988776554  5778876431         1  1224468999999986522223333332221 3


Q ss_pred             CceEEEEe
Q 020393          118 GGSYIIME  125 (326)
Q Consensus       118 ~~~~~v~e  125 (326)
                      +..|++||
T Consensus       642 d~yyl~te  649 (772)
T KOG1152|consen  642 DYYYLETE  649 (772)
T ss_pred             CeeEEEec
Confidence            45555554

>PF13575 DUF4135: Domain of unknown function (DUF4135)

Probab=91.98  E-value=1.8  Score=40.61  Aligned_cols=95  Identities=20%  Similarity=0.152  Sum_probs=54.4

Q ss_pred             ceeeEeE-eCCccc--cceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcC-----CCCCcceeeecccCCCce
Q 020393           50 HITKICP-VGGGCI--NLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETR-----TIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~-l~~G~~--n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~-----~~~vP~~~~~~~~~~~~~  120 (326)
                      ++++++. .+.-..  ..|.+|+.++| ++|-|--+-.....+   .++++++.+..     .+|+|+++..+     ..
T Consensus        44 ~i~~I~~~~GD~H~~Gr~V~~l~f~~g~kivYKPRsl~~d~~f---~~l~~~ln~~~~~~~~~l~~~~~l~~g-----~~  115 (370)
T PF13575_consen   44 KITSIEFGLGDTHNGGRSVAILEFSSGKKIVYKPRSLSIDKAF---NDLLEWLNEKNGTPSLDLPTPKVLDRG-----DG  115 (370)
T ss_pred             CceEecCCCCCcCCCCceEEEEEECCCCEEEEeCcccHHHHHH---HHHHHHHhhhccccccccccceeeecc-----Cc
Confidence            5566554 222222  36888888887 777776543222222   45567776653     24555666433     23


Q ss_pred             EEEEeeecCCCCC------CcHHHHHHHHHHHhhcCCC
Q 020393          121 YIIMEFIEFGSSR------GNQSVFGKKLAEMHKAGKS  152 (326)
Q Consensus       121 ~~v~e~l~G~~~~------~~~~~lg~~La~lH~~~~~  152 (326)
                      |.-+||++-.+..      ..-+++|..||-+|.....
T Consensus       116 YgW~EfI~~~~c~~~~ev~~yY~r~G~llal~y~L~~~  153 (370)
T PF13575_consen  116 YGWQEFIEHEPCNSEEEVERYYYRLGVLLALLYLLNGT  153 (370)
T ss_pred             ceeEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            6677888876552      2235667777766666653

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=91.22  E-value=0.14  Score=45.15  Aligned_cols=36  Identities=25%  Similarity=0.410  Sum_probs=28.8

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEccc--cccCchhh
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEA  258 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~--~~~G~~~~  258 (326)
                      ..-++|.|++|+|+|+.++|..-|=||.  ..+|.|-.
T Consensus       119 ~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen  119 SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence            3468999999999999999988999974  35775543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=91.16  E-value=0.14  Score=50.10  Aligned_cols=28  Identities=32%  Similarity=0.340  Sum_probs=23.3

Q ss_pred             CcceeecCCCCCCeeec-CCCCeEEEccc
Q 020393          223 EPCLLHGDLWSGNISSD-KNGEPVILDPA  250 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~-~~~~~~iID~~  250 (326)
                      ..+++|+||||+|||++ ..+..-|+||.
T Consensus       433 ~~gvvhRDLkp~NIL~~~~~g~lrltyFG  461 (612)
T KOG0603|consen  433 EQGVVHRDLKPGNILLDGSAGHLRLTYFG  461 (612)
T ss_pred             hcCeeecCCChhheeecCCCCcEEEEEec
Confidence            46999999999999995 55667899963

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=90.95  E-value=0.17  Score=44.91  Aligned_cols=28  Identities=25%  Similarity=0.297  Sum_probs=23.7

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEcc
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDP  249 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~  249 (326)
                      ...++||.|++|.|||+|+.|+.-+.||
T Consensus       209 eKH~viHRDvKPSNILlDe~GniKlCDF  236 (391)
T KOG0983|consen  209 EKHGVIHRDVKPSNILLDERGNIKLCDF  236 (391)
T ss_pred             HhcceeecccCccceEEccCCCEEeecc
Confidence            4679999999999999998887666665

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=90.46  E-value=0.97  Score=42.97  Aligned_cols=73  Identities=19%  Similarity=0.112  Sum_probs=47.0

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC--CCc-eEEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP--TGG-SYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~--~~~-~~~v  123 (326)
                      ++.+|.|.+..++.+...  +..||+|.-.-.     .+.....|..++..      +.-|-++.+.+..  ++. -+++
T Consensus         9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~------~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK------LLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh------ccCCCeeeeccchhcCCceEEEE
Confidence            345677888877777643  347999876431     12233456555443      4468888776543  455 8999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |+|++|+++
T Consensus        83 m~Y~eGg~l   91 (426)
T KOG0589|consen   83 MEYCEGGDL   91 (426)
T ss_pred             EeecCCCCH
Confidence            999999865

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.13  E-value=1.7  Score=41.69  Aligned_cols=49  Identities=14%  Similarity=-0.002  Sum_probs=32.7

Q ss_pred             eEeEeCCccccceEEEEeCCc-cEE-EEecCCCC--cchHHHHHHHHHHHHhc
Q 020393           53 KICPVGGGCINLASRYGTDAG-SFF-VKTNRSIG--PSMFEGEALGLGAMYET  101 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~-~~v-lK~~~~~~--~~~~~~E~~~l~~L~~~  101 (326)
                      -+++++=|.+++||.-....+ +|| +|+....+  .+.-.-|..+|+.+++.
T Consensus        82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~  134 (590)
T KOG1290|consen   82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREG  134 (590)
T ss_pred             EEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhc
Confidence            466788888999999866544 554 47765421  12234688889988875

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=89.80  E-value=0.67  Score=45.38  Aligned_cols=71  Identities=20%  Similarity=0.235  Sum_probs=49.8

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--CCCceEEEEeee
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--PTGGSYIIMEFI  127 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~~~~~~~v~e~l  127 (326)
                      +|.+++.++.|....||+-...+..+.||..+.    +-+.+.   ++|++   +.-|.++.+...  +..-.++||||+
T Consensus       125 ~IsELeWlGSGaQGAVF~Grl~netVAVKKV~e----lkETdI---KHLRk---LkH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  125 EISELEWLGSGAQGAVFLGRLHNETVAVKKVRE----LKETDI---KHLRK---LKHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             HhhhhhhhccCcccceeeeeccCceehhHHHhh----hhhhhH---HHHHh---ccCcceeeEeeeecCCceeEEeeecc
Confidence            678888999999999999888888888876532    223343   45553   346777776532  246789999999


Q ss_pred             cCC
Q 020393          128 EFG  130 (326)
Q Consensus       128 ~G~  130 (326)
                      +-+
T Consensus       195 a~G  197 (904)
T KOG4721|consen  195 AQG  197 (904)
T ss_pred             ccc
Confidence            744

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=89.45  E-value=0.46  Score=41.42  Aligned_cols=29  Identities=24%  Similarity=0.212  Sum_probs=23.5

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..+.+||.|++|.|+|.+.++..-|=||.
T Consensus       141 h~k~VIhRdiKpenlLlg~~~~lkiAdfG  169 (281)
T KOG0580|consen  141 HLKRVIHRDIKPENLLLGSAGELKIADFG  169 (281)
T ss_pred             ccCCcccCCCCHHHhccCCCCCeeccCCC
Confidence            46789999999999999877766666643

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=89.25  E-value=0.21  Score=44.32  Aligned_cols=39  Identities=31%  Similarity=0.280  Sum_probs=30.4

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEcc-c-cc--cCchhhhhh
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDP-A-CY--YGHNEAEFG  261 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~-~-~~--~G~~~~Dla  261 (326)
                      ...++|.||+|.|||++++.+..|-|| . |.  -|....||-
T Consensus       141 a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelC  183 (411)
T KOG0599|consen  141 ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELC  183 (411)
T ss_pred             HhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhc
Confidence            357999999999999998877889996 3 32  566666763

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=89.24  E-value=3  Score=38.36  Aligned_cols=69  Identities=12%  Similarity=0.168  Sum_probs=44.7

Q ss_pred             eEeCCccccceEEEEe--CCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC-ceEEEEeee
Q 020393           55 CPVGGGCINLASRYGT--DAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG-GSYIIMEFI  127 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~-~~~~v~e~l  127 (326)
                      .+|+.|.+...|.-+-  .+..+.+|+-+.. ...+++-|++.++.|..  ..-+|.+|+++.  +| .-.+|++-|
T Consensus        34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g--~~GIP~vYYFGq--eG~~NiLVidLL  106 (449)
T KOG1165|consen   34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGG--TEGIPQVYYFGQ--EGKYNILVIDLL  106 (449)
T ss_pred             cccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcC--CCCCCceeeecc--ccchhhhhhhhh
Confidence            3466776555444221  3446778988753 34568889999999985  356899999986  34 345555543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=87.69  E-value=0.49  Score=50.01  Aligned_cols=28  Identities=29%  Similarity=0.261  Sum_probs=24.7

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++||.||+|.||++++++.+-|.||.
T Consensus       715 ~~giIHRDLKP~NIFLd~~~~VKIGDFG  742 (1351)
T KOG1035|consen  715 DQGIIHRDLKPRNIFLDSRNSVKIGDFG  742 (1351)
T ss_pred             hCceeeccCCcceeEEcCCCCeeecccc
Confidence            4569999999999999988878899974

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=87.42  E-value=0.3  Score=48.82  Aligned_cols=138  Identities=21%  Similarity=0.178  Sum_probs=79.0

Q ss_pred             ceeeEeEeCCccccceEEEEeC--Cc---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           50 HITKICPVGGGCINLASRYGTD--AG---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      +|+-.+.++.|.+..|+|-+.+  +|   .+-||+-+.+.    ...|..|+..+..|...   .+-++|+.-.  +...
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~---hliRLyGvVl--~qp~  185 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHP---HLIRLYGVVL--DQPA  185 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCc---ceeEEeeeec--cchh
Confidence            4555667889999999997764  34   57788876542    34577888877666532   2333443321  1222


Q ss_pred             EEEEeeecCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCCh
Q 020393          121 YIIMEFIEFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS  200 (326)
Q Consensus       121 ~~v~e~l~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~  200 (326)
                      -+|+|-          ..+|..|.+||+....  .|                        .. .++-.+.          
T Consensus       186 mMV~EL----------aplGSLldrLrka~~~--~l------------------------lv-~~Lcdya----------  218 (1039)
T KOG0199|consen  186 MMVFEL----------APLGSLLDRLRKAKKA--IL------------------------LV-SRLCDYA----------  218 (1039)
T ss_pred             hHHhhh----------cccchHHHHHhhcccc--ce------------------------eH-HHHHHHH----------
Confidence            333333          3456779999994331  11                        00 0111111          


Q ss_pred             HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          201 TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       201 ~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                         .++...++    +|    ...++||.||-..|+|+-....+-|-||.
T Consensus       219 ---~QiA~aM~----YL----eskrlvHRDLAARNlllasprtVKI~DFG  257 (1039)
T KOG0199|consen  219 ---MQIAKAMQ----YL----ESKRLVHRDLAARNLLLASPRTVKICDFG  257 (1039)
T ss_pred             ---HHHHHHHH----HH----hhhhhhhhhhhhhhheecccceeeeeccc
Confidence               11111111    23    24589999999999999765556788974

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=87.24  E-value=0.36  Score=41.87  Aligned_cols=31  Identities=39%  Similarity=0.574  Sum_probs=27.0

Q ss_pred             CCCcceeecCCCCCCeeecCCCCeEEEcccc
Q 020393          221 NVEPCLLHGDLWSGNISSDKNGEPVILDPAC  251 (326)
Q Consensus       221 ~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~  251 (326)
                      ......+|||..|.||+.|+.|-.-++|+.|
T Consensus       159 ~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  159 SENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             ccCCCeecCCCChhheeecCCCCEEecChhh
Confidence            3567899999999999999999889999743

The function of this family is unknown.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=86.40  E-value=0.8  Score=47.57  Aligned_cols=27  Identities=0%  Similarity=0.022  Sum_probs=22.5

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEcc
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDP  249 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~  249 (326)
                      ...+||+|++|.|||++..+...++|+
T Consensus        98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~  124 (793)
T PLN00181         98 SQGIVVHNVRPSCFVMSSFNHVSFIES  124 (793)
T ss_pred             hCCeeeccCCchhEEEcccCcEEEeec
Confidence            457999999999999987666677775

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=85.67  E-value=0.61  Score=43.70  Aligned_cols=35  Identities=29%  Similarity=0.439  Sum_probs=25.8

Q ss_pred             CcceeecCCCCCCeeec--CCCCe--EEEccccccCchh
Q 020393          223 EPCLLHGDLWSGNISSD--KNGEP--VILDPACYYGHNE  257 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~--~~~~~--~iID~~~~~G~~~  257 (326)
                      ..++-|.|++.+|||++  +|+.+  +|-||.|+.+|-.
T Consensus       359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~  397 (598)
T KOG4158|consen  359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN  397 (598)
T ss_pred             HccchhhcccccceEEEecCCCCcEEEEcccceeeeccc
Confidence            56899999999999996  45554  5667866655543

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=85.02  E-value=0.58  Score=41.14  Aligned_cols=27  Identities=22%  Similarity=0.211  Sum_probs=23.2

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..++|+|++|.||++++++...+.|+.
T Consensus       132 ~~i~H~dikp~nili~~~~~~kl~dfg  158 (273)
T cd05074         132 KNFIHRDLAARNCMLNENMTVCVADFG  158 (273)
T ss_pred             CCEeecccchhhEEEcCCCCEEECccc
Confidence            369999999999999887777888963

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=84.56  E-value=0.59  Score=42.24  Aligned_cols=43  Identities=23%  Similarity=0.324  Sum_probs=33.1

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEcc-cc----ccCchhhhhhhh-hh
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDP-AC----YYGHNEAEFGMS-WC  265 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~-~~----~~G~~~~Dla~~-~~  265 (326)
                      .-..||.|++|.|||+..+++.-+.|| .+    .-|+..-|-... |+
T Consensus       119 k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWY  167 (396)
T KOG0593|consen  119 KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWY  167 (396)
T ss_pred             hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence            345999999999999999998999996 33    256667776554 54

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=84.33  E-value=0.57  Score=41.57  Aligned_cols=28  Identities=29%  Similarity=0.401  Sum_probs=24.0

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..-+||.|++|.|||++..|-.-+.||.
T Consensus       186 ~lkiIHRDvKPSNILldr~G~vKLCDFG  213 (361)
T KOG1006|consen  186 ELKIIHRDVKPSNILLDRHGDVKLCDFG  213 (361)
T ss_pred             HhhhhhccCChhheEEecCCCEeeeccc
Confidence            4578999999999999988877888874

>PHA00451 protein kinase

Probab=84.33  E-value=0.78  Score=40.49  Aligned_cols=32  Identities=41%  Similarity=0.601  Sum_probs=24.8

Q ss_pred             ecCCCCCCeeecCCCCeEEEccccccCchhhh
Q 020393          228 HGDLWSGNISSDKNGEPVILDPACYYGHNEAE  259 (326)
Q Consensus       228 HgDl~~~NiL~~~~~~~~iID~~~~~G~~~~D  259 (326)
                      --|.|+|||++++++.+.|-|+-++..|...+
T Consensus       192 SFDmHSGNiMf~~~g~p~ITDPVSFS~dr~re  223 (362)
T PHA00451        192 SFDMHSGNIMFDQDGVPYITDPVSFSHDRERE  223 (362)
T ss_pred             cccccCCceeeCCCCCeEecCCccccCccccC
Confidence            34999999999999999999976555444443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=83.92  E-value=0.67  Score=41.86  Aligned_cols=36  Identities=25%  Similarity=0.279  Sum_probs=23.6

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEccc--cccCchhh
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDPA--CYYGHNEA  258 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~--~~~G~~~~  258 (326)
                      ..+++|||+++.|++++++|...+=|+.  ...|....
T Consensus       163 ~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~  200 (288)
T PF14531_consen  163 SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR  200 (288)
T ss_dssp             HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEE
T ss_pred             hcceEecccceeeEEEcCCCCEEEcChHHHeecCceee
Confidence            4589999999999999999877777763  24565544

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=83.86  E-value=0.63  Score=41.40  Aligned_cols=28  Identities=29%  Similarity=0.311  Sum_probs=24.1

Q ss_pred             CcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          223 EPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ...++|.|++|||+|+..+-+..|.||.
T Consensus       174 sA~ILHRDIKPGNLLVNSNCvLKICDFG  201 (449)
T KOG0664|consen  174 TANILHRDIKPGNLLVNSNCILKICDFG  201 (449)
T ss_pred             hcchhhccCCCccEEeccCceEEecccc
Confidence            4589999999999999877667889975

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=83.59  E-value=1.1  Score=41.21  Aligned_cols=33  Identities=21%  Similarity=0.218  Sum_probs=27.1

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEccc-cccC
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYG  254 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G  254 (326)
                      ....++|.||+|+|++++.+-...|.||. +...
T Consensus       142 HSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~  175 (359)
T KOG0660|consen  142 HSANVIHRDLKPSNLLLNADCDLKICDFGLARYL  175 (359)
T ss_pred             hcccccccccchhheeeccCCCEEeccccceeec
Confidence            45689999999999999988778999984 4433

>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.99  E-value=7.4  Score=35.39  Aligned_cols=68  Identities=18%  Similarity=0.104  Sum_probs=45.3

Q ss_pred             hcccccCCCCCcceeecCCCCCCeeecCC--CCe--EEEcc-ccccCchhhhhhhhh--h------cCCC--------hH
Q 020393          213 LAPLFEGVNVEPCLLHGDLWSGNISSDKN--GEP--VILDP-ACYYGHNEAEFGMSW--C------AGFG--------GS  271 (326)
Q Consensus       213 ~~~~l~~~~~~~~LiHgDl~~~NiL~~~~--~~~--~iID~-~~~~G~~~~Dla~~~--~------~~~~--------~~  271 (326)
                      .+..++  ..|.+|+-||+|.+|+=--.+  |.+  -|=|| +...|.+.+||..+.  +      .+++        +.
T Consensus        49 ~p~~lp--~~p~tw~cGD~HLgN~ga~~~~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a~Rs~~L~d~d~~~~~~~  126 (410)
T COG4320          49 WPWSLP--KTPFTWLCGDAHLGNFGAARNSKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLAGRSNGLNDADIEKAIKI  126 (410)
T ss_pred             CccccC--CCCceEEecccccccchhhccCCCceEEEecccchhhccchHHHHHHHHHHHHHHhhccCCCchhHHHHHHH
Confidence            443444  468899999999999865443  322  23456 478999999998652  1      2333        36


Q ss_pred             hHHHhhhhCCC
Q 020393          272 FYNSYFEVMPK  282 (326)
Q Consensus       272 fl~~Y~~~~~l  282 (326)
                      |+++|....+.
T Consensus       127 ~v~~Y~~Aa~s  137 (410)
T COG4320         127 MVQAYKMAAFS  137 (410)
T ss_pred             HHHHHHHhhcc
Confidence            89999655544

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=82.71  E-value=1.3  Score=41.64  Aligned_cols=73  Identities=23%  Similarity=0.244  Sum_probs=46.1

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEcccc--ccCchhhhhhhhhhcC---CChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDPAC--YYGHNEAEFGMSWCAG---FGGSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~~--~~G~~~~Dla~~~~~~---~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      ..-+++|.||+..|||+|.++..-|-||..  .|.+--  +-...|+.   -.+.+++|---..|.-+.|.--+.+|.|.
T Consensus       170 HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLV  247 (668)
T KOG0611|consen  170 HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLV  247 (668)
T ss_pred             hhccceecccchhheeecCCCCeeeeccchhhhhcccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHh
Confidence            355899999999999999988888988742  222221  11123432   13566666433356667887767777654

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=82.61  E-value=0.92  Score=43.93  Aligned_cols=28  Identities=21%  Similarity=0.202  Sum_probs=23.2

Q ss_pred             CcceeecCCCCCCeeecCCC-CeEEEccc
Q 020393          223 EPCLLHGDLWSGNISSDKNG-EPVILDPA  250 (326)
Q Consensus       223 ~~~LiHgDl~~~NiL~~~~~-~~~iID~~  250 (326)
                      ...++|.|++|+||||.++. +.-|.||.
T Consensus       554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfG  582 (752)
T KOG0670|consen  554 KCGVLHADIKPDNILVNESKNILKLCDFG  582 (752)
T ss_pred             hcCeeecccCccceEeccCcceeeeccCc
Confidence            45899999999999998764 35789985

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=82.38  E-value=0.64  Score=43.96  Aligned_cols=25  Identities=24%  Similarity=0.262  Sum_probs=19.1

Q ss_pred             cceeecCCCCCCeeecCCC----CeEEEc
Q 020393          224 PCLLHGDLWSGNISSDKNG----EPVILD  248 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~----~~~iID  248 (326)
                      .-++|+|+|||||++....    ..+++|
T Consensus       364 DNFvHaDlHPGNVlirf~~t~~~~~~~~~  392 (565)
T KOG1236|consen  364 DNFVHADLHPGNVLIRFNKTEDNLRGVHK  392 (565)
T ss_pred             hcceecccCCCcEEEEecCCCcccccccc
Confidence            3689999999999997542    246666

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=82.36  E-value=1.7  Score=39.62  Aligned_cols=35  Identities=23%  Similarity=0.227  Sum_probs=26.7

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEccc-cccCch
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDPA-CYYGHN  256 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~~-~~~G~~  256 (326)
                      ...+++|.||+|.||++..+...-|.|+. +...++
T Consensus       135 hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~  170 (369)
T KOG0665|consen  135 HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT  170 (369)
T ss_pred             HhcceeecccCcccceecchhheeeccchhhcccCc
Confidence            35699999999999999877767788873 443333

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=81.34  E-value=2.7  Score=39.34  Aligned_cols=83  Identities=14%  Similarity=0.111  Sum_probs=47.2

Q ss_pred             CCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh------hcCCChHhHHHhhhhCCC-CcCH---HHHH
Q 020393          222 VEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW------CAGFGGSFYNSYFEVMPK-QPGF---EKRR  290 (326)
Q Consensus       222 ~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~------~~~~~~~fl~~Y~~~~~l-~~~~---~~r~  290 (326)
                      ...-+-|.|++-+|||++ +|..-+||+ ++...-+--++....      +.|-.+-=++-|+..+.+ .-.|   +.+.
T Consensus       339 kkf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~l~~g~wa~F~P~T  417 (488)
T COG5072         339 KKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFEPIT  417 (488)
T ss_pred             hcCCcccccccccceeee-cCceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHHHhcCcHHhcccch
Confidence            456788999999999998 667889998 444333333333221      122222124556555432 2333   5566


Q ss_pred             HHHHHHHHHHHHHHh
Q 020393          291 DLYMLYHYLNHYNLF  305 (326)
Q Consensus       291 ~~y~l~~~l~~~~~~  305 (326)
                      .++.|+.+.....-+
T Consensus       418 NvlWL~yLs~~llkk  432 (488)
T COG5072         418 NVLWLYYLSHQLLKK  432 (488)
T ss_pred             hhHHHHHHHHHHHhh
Confidence            677666554333333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	326
3jr1_A	312	Crystal Structure Of Putative Fructosamine-3-Kinase		1e-22
3f7w_A	288	Crystal Structure Of Putative Fructosamine-3-Kinase		5e-18

>pdb|3JR1|A Chain A, Crystal Structure Of Putative Fructosamine-3-Kinase (Yp_719053.1) From Haemophilus Somnus 129pt At 2.32 A Resolution Length = 312

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 14/225 (6%)
Query: 71  DAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG 130
           +  + FVK N     S F  EA  L  + +T +I  P  + +G    G S++++E     
Sbjct: 58  EVQTVFVKINERSYRSXFRAEADQLALLAKTNSINVPLVYGIGN-SQGHSFLLLE--ALN 114
Query: 131 SSRGNQS---VFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLG 187
            S+  QS   +F +K+A++H+     K +G D D  +G   Q N W ++W +F++E+R+G
Sbjct: 115 KSKNKQSSFTIFAEKIAQLHQIQGPDK-YGLDFDTWLGPIYQPNDWQTSWAKFFSENRIG 173
Query: 188 YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGN-ISSDKNGEPVI 246
           +QL++  ++     I+     +++ +A      N +P +LHG+LW  N I  D   +  +
Sbjct: 174 WQLQICKEK---GLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVD--DKIFV 228
Query: 247 LDPACYYGHNEAEFGM-SWCAGFGGSFYNSYFEVMPKQPGFEKRR 290
            +PACY+G  E +    S    F  +FY  Y E+ P + G+ +R+
Sbjct: 229 CNPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERK 273

>pdb|3F7W|A Chain A, Crystal Structure Of Putative Fructosamine-3-Kinase (Yp_290396.1) From Thermobifida Fusca Yx-Er1 At 1.85 A Resolution Length = 288

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 114/265 (43%), Gaps = 26/265 (9%)
Query: 70  TDAGSFFVKTNRSIGPSM---FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF 126
            D    FVK      P++   F  EALGL   +  R+  +P P   G        +  E+
Sbjct: 37  ADGTPLFVKALPDDAPALDGLFRAEALGLD--WLGRSFGSPVPQVAG---WDDRTLAXEW 91
Query: 127 I-EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHR 185
           + E   +      FG +LA  H AG  S  FG   D  IG  P  N   S W EFYAE R
Sbjct: 92  VDERPPTPEAAERFGHQLAAXHLAGAES--FGATWDGYIGPLPXDNTPRSTWPEFYAEQR 149
Query: 186 LGYQLKLALDQ----YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN 241
           +   L+ A D+     GD  + ++    + +LA    G    P  +HGDLW+GN+    +
Sbjct: 150 ILPYLRRAADRGALTPGDVRLVEKVLDALDHLA----GDPEPPARIHGDLWNGNVLWQDD 205
Query: 242 GEPVILDPACYYGHNEAEFGMSWCAGFGGSFY----NSYFEVMPKQPGFEKRRDXXXXXX 297
           G  V++DPA + GH EA+      A FG  +     ++Y EV P   G+  R        
Sbjct: 206 GA-VVIDPAAHGGHREADLAX--LALFGLPYLDRVRDAYNEVAPLAEGWRARIPLHQLHP 262
Query: 298 XXXXXXXFGSGYRSSALSIIDDYLR 322
                  FG+ YR++ +      LR
Sbjct: 263 LLVHVCLFGAAYRTTLVDTARAALR 287

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	326
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	1e-88
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	3e-84
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	9e-17
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	2e-10
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	4e-10
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	2e-07
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	4e-07
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	1e-06
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	3e-06
3mes_A	424	Choline kinase; malaria, structural genomics, stru	9e-05
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	3e-04

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} Length = 312

 Score =  267 bits (683), Expect = 1e-88
 Identities = 74/294 (25%), Positives = 140/294 (47%), Gaps = 12/294 (4%)

Query: 38  IREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLG 96
           I + +  + G    I     +  G +N       +  + FVK N     SMF  EA  L 
Sbjct: 24  ISQVLAEQFGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLA 83

Query: 97  AMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGS-SRGNQSVFGKKLAEMHKAGKSSKG 155
            + +T +I  P  + +G    G S++++E +      + + ++F +K+A++H+     K 
Sbjct: 84  LLAKTNSINVPLVYGIGNSQ-GHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDK- 141

Query: 156 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 215
           +G D D  +G   Q N W ++W +F++E+R+G+QL++  ++      +     +++ +A 
Sbjct: 142 YGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLI---FGNIDLIVQIVAD 198

Query: 216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFG-MSWCAGFGGSFYN 274
                N +P +LHG+LW  N     + +  + +PACY+G  E +    S    F  +FY 
Sbjct: 199 TLSKHNPKPSILHGNLWIENCIQV-DDKIFVCNPACYWGDRECDIAFSSLFEPFPTNFYQ 257

Query: 275 SYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF---GSGYRSSALSIIDDYLRMLK 325
            Y E+ P + G+ +R+ +Y LY+ LN    +      Y S    +I+  L  + 
Sbjct: 258 RYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQSYVSLTQKLINQILHKID 311

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* Length = 339

 Score = 79.0 bits (194), Expect = 9e-17
 Identities = 38/294 (12%), Positives = 77/294 (26%), Gaps = 31/294 (10%)

Query: 32  TLSDDPIREWILSE--GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFE 89
            +    + E +             I   G      A +  +++ S+F+K        +  
Sbjct: 5   PIQAQQLIELLKVHYGIDIHTAQFI-QGGADTNAFAYQADSESKSYFIKLKYGYHDEINL 63

Query: 90  GEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEFGSSRGNQSV-------F 139
                L      + I  P       L         I   FI    +   Q++        
Sbjct: 64  SIIRLL-HDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH-APNGFTQNLTGKQWKQL 121

Query: 140 GKKLAEMHKAGKSSKGFGFD--VDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQY 197
           GK L ++H+                +      +  + +      ++ +L    K   +Q 
Sbjct: 122 GKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQN 181

Query: 198 GDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILD-PACYYGHN 256
                  R     + L+   +    +  L H D+ +GN+         I+D         
Sbjct: 182 SA--AIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPK 239

Query: 257 EAEFGMSWCAGFGG--------SFYNSYFEVMPKQ---PGFEKRRDLYMLYHYL 299
           E +                    FY  Y E+   +     +   R +  +  Y 
Sbjct: 240 ERDLMFIGGGVGNVWNKPHEIQYFYEGYGEINVDKTILSYYRHERIVEDIAVYG 293

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} Length = 346

 Score = 60.4 bits (146), Expect = 2e-10
 Identities = 47/305 (15%), Positives = 92/305 (30%), Gaps = 36/305 (11%)

Query: 50  HITKICPVGGGCINLASRYGTDAGSFFVK-TNRSIGPSMFEGEALGLGAMYETRTIRAPR 108
              KI  + G  + L  +  TD+G+  +K  +R    ++F   A         + +  P 
Sbjct: 33  QAEKIDVIQGNQMALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDY---LAKKGMNVPG 89

Query: 109 P--FKVGALPT---GGSYIIMEFIEFGSSRGNQSV-----FGKKLAEMHKAGKSSKG-FG 157
               K G+L +      +++ ++IE G               K LA+ H A    +   G
Sbjct: 90  ILPNKKGSLYSKHGSFLFVVYDWIE-GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNG 148

Query: 158 FDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDS--TIYQRGHRLMKNL-- 213
             +   +G  P         +E +       +       Y        + G R+   L  
Sbjct: 149 VPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQ 208

Query: 214 ---APLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGM------- 262
               P  E +   P L H D  +GN    +N +  ++D     +     +          
Sbjct: 209 STYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLD 268

Query: 263 ---SWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDD 319
               W         N+Y    P     +K+  +++   +                ++  +
Sbjct: 269 TTGVWDDETFNVMLNAYESRAPLTE-EQKQV-MFIDMLFPYELYDVIREKYVRKSALPKE 326

Query: 320 YLRML 324
            L   
Sbjct: 327 ELESA 331

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} Length = 420

 Score = 59.6 bits (143), Expect = 4e-10
 Identities = 47/310 (15%), Positives = 92/310 (29%), Gaps = 44/310 (14%)

Query: 33  LSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEA 92
           +   P     +   K+     I  VG G +N        +GS  +K        + E   
Sbjct: 18  IKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWP 77

Query: 93  LGLG-AMYETRTIRAPRPFKVGALPT------GGSYIIMEFIE-------FGSSRGNQ-- 136
           +    A +E  T+R         +P         + I M ++E        G   G +  
Sbjct: 78  MTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYP 137

Query: 137 ---SVFGKKLAEMHKAGKSSKGFGFDVDNTIGST---PQINKWTSN--WIEFYAEHRLGY 188
                    +A+             +    +       ++ + T    + + Y       
Sbjct: 138 FLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNR 197

Query: 189 QLKLALDQ-----YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGE 243
                LD        DS +      L                L+HGDL +G++   ++  
Sbjct: 198 WTSPYLDDDAKAVREDSALKLEIAELKSMF------CERAQALIHGDLHTGSVMVTQD-S 250

Query: 244 PVILDPA-CYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDL--YMLYHYLN 300
             ++DP   +YG    + G      + G+   ++F           R++   ++L     
Sbjct: 251 TQVIDPEFSFYGPMGFDIGA-----YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ 305

Query: 301 HYNLFGSGYR 310
            +NLF   + 
Sbjct: 306 TWNLFNKRFI 315

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* Length = 397

 Score = 50.7 bits (120), Expect = 2e-07
 Identities = 43/332 (12%), Positives = 96/332 (28%), Gaps = 51/332 (15%)

Query: 29  TFATLSDDPIREWILSEG--KATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSIG 84
            + TL++       +  G   +        +G G +N            +  +K      
Sbjct: 8   LYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYA 67

Query: 85  PSMFEG----------EALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE------ 128
             + E           E+  L    E      PR F      T  +  +ME +       
Sbjct: 68  KVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVF---YSDTEMAVTVMEDLSHLKIAR 124

Query: 129 FGSSRGNQ-----SVFGKKLAEMHKAGKSSKGFGFDVDNTIG--STPQINKWTSNWI--E 179
            G   G          G+ L +                  +   + P++   T   +  +
Sbjct: 125 KGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTD 184

Query: 180 FYAEHRLG----YQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGN 235
            + +H                + + ++     +L K+             L+HGDL +G+
Sbjct: 185 PFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFL------TSAETLIHGDLHTGS 238

Query: 236 ISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYF--EVMPKQPGFEKRRDLY 293
           I + ++   VI     +YG    + G      F  + + +    +   ++P +E    ++
Sbjct: 239 IFASEHETKVIDPEFAFYGPIGFDVGQ-----FIANLFLNALSRDGADREPLYEHVNQVW 293

Query: 294 MLYH--YLNHYNLFGSGYRSSALSIIDDYLRM 323
             +   +   +        ++    + D L  
Sbjct: 294 ETFEETFSEAWQKDSLDVYANIDGYLTDTLSH 325

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* Length = 306

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 40/302 (13%), Positives = 82/302 (27%), Gaps = 55/302 (18%)

Query: 51  ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSM-FEGEALGLGAMYETRTIRAPRP 109
           I  +  +G G  N A     D   +  +  +S   +     E   L  +     +  P+ 
Sbjct: 21  IQSVESLGEGFRNYAILVNGD---WVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQY 77

Query: 110 FKVGALPTGGSYIIMEFIEFGSSRGNQSV--------------FGKKLAEMHKAGKSSKG 155
             +G    G  ++    ++ G   G   +                + + E+         
Sbjct: 78  VYIGKRSDGNPFVGYRKVQ-GQILGEDGMAVLPDDAKDRLALQLAEFMNELSAF------ 130

Query: 156 FGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAP 215
               V+  I +   +    +  +          Q+   LD+     +  R    M +   
Sbjct: 131 ---PVETAISAGVPVTNLKNKILLLSEAVED--QVFPLLDESLRDYLTLRFQSYMTHPVY 185

Query: 216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL------------DPACYYGHNEAEFGMS 263
                   P L+HGDL   +  ++ N     L            DP         ++   
Sbjct: 186 T----RYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDY-------DYVYL 234

Query: 264 WCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLRM 323
                G  F          +   +       L+   +  +    G R+     I + L +
Sbjct: 235 L-EDCGELFTRQVMAY-RGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLEL 292

Query: 324 LK 325
           L+
Sbjct: 293 LE 294

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 Length = 264

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 27/221 (12%), Positives = 56/221 (25%), Gaps = 30/221 (13%)

Query: 69  GTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE 128
                  FVKT+ S   +  + EA  L  +  T  +       V     G  ++++  + 
Sbjct: 41  AQGRPVLFVKTDLSGALNELQDEAARLSWLATTG-VPCAAVLDVVT-EAGRDWLLLGEVP 98

Query: 129 -------FGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY 181
                    +     S+    +  +H    ++  F     + I       +      +  
Sbjct: 99  GQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDL 158

Query: 182 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN 241
            E   G                    RL   +         +  + HGD    NI  +  
Sbjct: 159 DEEHQGLAPAELFA------------RLKARMPDG-----EDLVVTHGDACLPNIMVENG 201

Query: 242 GEPVILDPA-CYYGHNEAEFGM---SWCAGFGGSFYNSYFE 278
                +D           +  +         GG + + +  
Sbjct: 202 RFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLV 242

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} Length = 424

 Score = 42.8 bits (99), Expect = 9e-05
 Identities = 34/271 (12%), Positives = 70/271 (25%), Gaps = 22/271 (8%)

Query: 53  KICPVGGGCIN--LASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPF 110
           ++  +  G  N         ++ S  +K  R +     +       +  E    R     
Sbjct: 74  EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNI 133

Query: 111 KVGA--LPTGGSYIIMEFIEFG-------SSRGNQSVFGKKLAEMHKAGKSSKGFGFDVD 161
            +    +       I EFI+                   K +  +H        F    D
Sbjct: 134 NIAPNIIADFPEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFD 193

Query: 162 NTIGSTPQINKWTSNWIEFYAEHRLGYQLKL------ALDQYGDSTIYQRGHRLMKNLAP 215
                  +I  W        +++      +L       +DQ  +  +      + + L  
Sbjct: 194 KEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEEIDQLEELIMGGEKFSMERALEL 253

Query: 216 LFEGVNVEPCLLHGDLWSGNISSDKNGEPVI---LDPACYYGHNEAEFGMSWCAGFGGSF 272
                       H DL   N+   +N   +I        + G + A +   +   +    
Sbjct: 254 KLYSPAFSLVFAHNDLQENNLLQTQNNIRMIDYEYSAINFAGADIANYFCEYIYDYCSEK 313

Query: 273 YNSYFEVMPKQPGFEKRRDLYMLYHYLNHYN 303
              +       P  E R+    +  YL+   
Sbjct: 314 QPYFKFKYEDYPCEELRKL--FISVYLSQTL 342

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* Length = 263

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 22/227 (9%), Positives = 54/227 (23%), Gaps = 40/227 (17%)

Query: 56  PVGGGCINLAS-RYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYE-----TRTIRAPRP 109
               G       +   +  + ++K    +  S ++G    +    +        +  P+ 
Sbjct: 20  KDTEGMSPAKVYKLVGENENLYLK----MTDSRYKGTTYDVEREKDMMLWLEGKLPVPKV 75

Query: 110 FKVGALPTGGSYIIMEFIEF----------GSSRGNQSVFGKKLAEMHKAGKSSKGFGFD 159
                   G S ++M   +            S      ++ + +   H    S   +   
Sbjct: 76  LHFERHD-GWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNS 134

Query: 160 VDNTIGSTPQINKWTSNWIEFYAEHRLG-YQLKLALDQYGDSTIYQRGHRLMKNLAPLFE 218
           +D+ +             +++   + L     +   +        +    L         
Sbjct: 135 LDSRLA-----------ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEE-- 181

Query: 219 GVNVEPCLLHGDLWSGNISSDKNGEPVILD-PACYYGHNEAEFGMSW 264
               E    HGDL   NI          +D           +     
Sbjct: 182 ----ELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCV 224

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	326
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	100.0
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	100.0
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	100.0
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	99.97
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	99.96
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	99.95
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.94
3ats_A	357	Putative uncharacterized protein; hypothetical pro	99.94
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.93
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	99.93
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	99.93
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	99.92
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	99.92
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	99.91
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.91
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.9
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.89
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	99.89
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	99.89
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	99.86
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	99.86
3mes_A	424	Choline kinase; malaria, structural genomics, stru	99.85
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	99.84
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	99.82
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	99.82
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	99.78
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	99.63
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.87
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.61
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.58
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.57
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.5
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.5
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.47
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.44
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.41
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.38
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.33
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.31
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.3
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.29
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.28
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	98.28
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.26
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.24
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.24
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.23
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.22
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.22
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.21
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.2
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.19
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.19
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.18
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.16
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.15
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.15
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.15
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.15
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.15
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.14
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.13
3uqc_A	286	Probable conserved transmembrane protein; structur	98.12
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.12
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.11
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.1
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.1
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.09
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.03
3niz_A	311	Rhodanese family protein; structural genomics, str	98.03
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.03
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.03
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.02
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.01
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.01
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.98
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.98
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	97.98
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.98
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	97.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	97.97
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	97.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	97.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	97.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	97.95
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	97.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.94
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	97.94
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	97.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	97.93
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	97.93
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	97.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	97.93
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	97.93
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.92
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.92
3soc_A	322	Activin receptor type-2A; structural genomics cons	97.92
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	97.9
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	97.9
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	97.89
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	97.89
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.88
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	97.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.88
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	97.88
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.87
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	97.87
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	97.87
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	97.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	97.86
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	97.86
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.85
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	97.85
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	97.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.84
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	97.84
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	97.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	97.84
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	97.84
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	97.83
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.83
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	97.83
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	97.83
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.83
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	97.82
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.82
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	97.82
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	97.81
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.81
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	97.81
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	97.81
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	97.81
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	97.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	97.79
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	97.79
3o0g_A	292	Cell division protein kinase 5; kinase activator c	97.79
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.78
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	97.78
3an0_A	340	Dual specificity mitogen-activated protein kinase;	97.78
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	97.78
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	97.78
3bhy_A	283	Death-associated protein kinase 3; death associate	97.78
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	97.77
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	97.77
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.76
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.76
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.76
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.76
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.76
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.76
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.76
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	97.75
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	97.75
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.75
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	97.75
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	97.74
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.74
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	97.74
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	97.74
3pls_A	298	Macrophage-stimulating protein receptor; protein k	97.74
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	97.74
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	97.74
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	97.73
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.73
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	97.73
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.72
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	97.72
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.72
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	97.72
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	97.72
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.72
3ork_A	311	Serine/threonine protein kinase; structural genomi	97.72
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	97.72
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	97.71
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	97.71
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	97.7
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	97.7
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.69
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.68
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.68
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.67
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	97.67
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	97.67
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	97.67
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	97.66
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.66
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	97.66
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	97.66
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.66
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.66
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	97.66
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	97.66
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	97.65
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	97.65
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	97.65
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.64
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.64
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.64
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.64
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	97.64
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.64
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.62
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.62
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	97.62
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.61
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	97.61
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	97.61
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	97.6
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.59
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	97.57
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	97.57
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	97.56
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	97.55
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.55
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.55
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.54
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.53
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.52
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	97.52
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.52
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	97.52
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.51
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	97.51
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.47
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	97.46
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	97.46
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	97.45
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	97.45
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.45
3rp9_A	458	Mitogen-activated protein kinase; structural genom	97.44
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.44
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.44
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.42
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	97.41
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	97.41
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.4
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	97.39
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.38
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	97.38
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.37
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	97.36
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.35
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.35
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.33
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	97.3
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.29
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.24
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.23
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	97.21
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	97.2
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	97.19
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	97.15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	97.14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	97.13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	96.9
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	96.88
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	93.58
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	87.48

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=100.00  E-value=4.5e-46  Score=335.90  Aligned_cols=277  Identities=28%  Similarity=0.402  Sum_probs=239.0

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceee
Q 020393           36 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFK  111 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~  111 (326)
                      ++|.+.+.+. .|.+|.+++++++|..|.+|+|++++| +||+|.++..   ....++.|++.|++|++..++|||+++.
T Consensus         3 ~~v~a~~~~l-~G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~   81 (288)
T 3f7w_A            3 NSVAARVTEL-TGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG   81 (288)
T ss_dssp             HHHHHHHHHH-HCCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred             HHHHHHHHHh-cCCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe
Confidence            4677777777 667899999999999999999999887 7999998753   2356899999999998877899999998


Q ss_pred             ecccCCCceEEEEeeecCCCCC-CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHH
Q 020393          112 VGALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQL  190 (326)
Q Consensus       112 ~~~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~  190 (326)
                      .+     ..+++|||+++.... ..++++|+.|+++|.....  .||+..++..|..++.+.|..+|..++.+.++.+++
T Consensus        82 ~~-----~~~lv~e~l~~~~~~~~~~~~lg~~La~lH~~~~~--~fg~~~~~~~g~~~~~~~~~~~w~~~~~~~rl~~~~  154 (288)
T 3f7w_A           82 WD-----DRTLAMEWVDERPPTPEAAERFGHQLAAMHLAGAE--SFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYL  154 (288)
T ss_dssp             EE-----TTEEEEECCCCCCCCHHHHHHHHHHHHHHHHTCCS--SBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHH
T ss_pred             cc-----CceEEEEeecccCCChHHHHHHHHHHHhhhhcccc--ccccccccccccccccCcccccchhhhHHhhHHHHH
Confidence            76     459999999988765 5678999999999998864  589999999999999999999999999887888877


Q ss_pred             HHHHhhcC-ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhhh-hc-C
Q 020393          191 KLALDQYG-DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSW-CA-G  267 (326)
Q Consensus       191 ~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~~-~~-~  267 (326)
                      ..+.+... +......++++.+.++.++.. ..+|+|||||||+||+++++++ +.|||+.+++||+++|||++. ++ +
T Consensus       155 ~~~~~~~~~~~~~~~~~e~l~~~L~~~~~~-~~~p~LvHGDlw~gNvl~~~~g-~~~iDp~~~~g~~e~Dla~~~~fg~~  232 (288)
T 3f7w_A          155 RRAADRGALTPGDVRLVEKVLDALDHLAGD-PEPPARIHGDLWNGNVLWQDDG-AVVIDPAAHGGHREADLAMLALFGLP  232 (288)
T ss_dssp             HHHHHTTSSCHHHHHHHHHHHHTHHHHTCS-CCCCEEECSCCSGGGEEEETTE-EEECSCCCEEECHHHHHHHHHHHCCT
T ss_pred             HHHHhccCcchhhhHHHHHHHHHHHHhccc-CCCCeeeecCCCCCcEEEcCCC-eEEEecccccCCHHHHHHHHHhcCCC
Confidence            76665543 445566777777777666654 4678999999999999999887 789999999999999999874 44 7


Q ss_pred             CChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Q 020393          268 FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGSGYRSSALSIIDDYLR  322 (326)
Q Consensus       268 ~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  322 (326)
                      +.++|+++|++..|++++|++|+.+|+||++|+|+.+||++|+.++.++++++|+
T Consensus       233 ~~~~f~~~Y~~~~pl~~~~~~R~~ly~ly~~l~h~~~fg~~y~~~~~~~~~~~l~  287 (288)
T 3f7w_A          233 YLDRVRDAYNEVAPLAEGWRARIPLHQLHPLLVHVCLFGAAYRTTLVDTARAALR  287 (288)
T ss_dssp             THHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHhhCCCCcCHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHhh
Confidence            8899999999999999999999999999999999999999999999999999985

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=100.00  E-value=2.6e-46  Score=340.15  Aligned_cols=282  Identities=26%  Similarity=0.473  Sum_probs=240.9

Q ss_pred             CchhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           34 SDDPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        34 ~~~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      .+++|.++|.+. |.+.++.+++++++|.+|.+|+|++++++||+|+++......++.|+++|++|++..+++||+|+..
T Consensus        20 ~~~~l~~~L~~~lg~~~~i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~   99 (312)
T 3jr1_A           20 MWKSISQVLAEQFGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGI   99 (312)
T ss_dssp             HHHHHHHHHHHHHSSCCCCCEEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEE
T ss_pred             cHHHHHHHHHHHhCCCcceeeeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEE
Confidence            358899999987 5444789999999999999999999888999999876545678899999999998768999999998


Q ss_pred             cccCCCceEEEEeeecCCCCC-CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHH
Q 020393          113 GALPTGGSYIIMEFIEFGSSR-GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK  191 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~~~~-~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~  191 (326)
                      +.. ++..|+||||++|.+.. ..+.++|+.||+||+.... +.||++.++++|.+||.|.|.++|.+|+.+.|+.+.++
T Consensus       100 ~~~-~g~~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~-~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~  177 (312)
T 3jr1_A          100 GNS-QGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGP-DKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQ  177 (312)
T ss_dssp             EEC-SSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCC-SSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHH
T ss_pred             eec-CCceEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCC-CCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHH
Confidence            765 57899999999999764 6789999999999999863 46999999999999999999999999998778888887


Q ss_pred             HHHhhcC-ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccccccCchhhhhhhh-hhcCCC
Q 020393          192 LALDQYG-DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMS-WCAGFG  269 (326)
Q Consensus       192 ~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~~~~G~~~~Dla~~-~~~~~~  269 (326)
                      .+.+.+. .+.+.++++++.+    .+.....+++|||||||++|+++++++ ++|||+.+.+|||++||+++ .++++.
T Consensus       178 ~a~~~g~~~~~~~~l~~~l~~----~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~~~~g~~~~Dl~~~~~~~~~~  252 (312)
T 3jr1_A          178 ICKEKGLIFGNIDLIVQIVAD----TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPACYWGDRECDIAFSSLFEPFP  252 (312)
T ss_dssp             HHHHHTCCCSCHHHHHHHHHH----HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCCCEEECTHHHHHHHTTSSCCC
T ss_pred             HHHHcCCChHHHHHHHHHHHH----HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCccccCChHHHHHHHHHhCCcc
Confidence            7665543 2333334444433    333224679999999999999999887 99999988999999999986 356788


Q ss_pred             hHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHhcc---CcHHHHHHHHHHHHH
Q 020393          270 GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLFGS---GYRSSALSIIDDYLR  322 (326)
Q Consensus       270 ~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~~~---~~~~~~~~~~~~~~~  322 (326)
                      ++|+++|++..|++++|++|+.+|+|+..++++..||+   +|+.++.++++++++
T Consensus       253 ~~~~~~Y~~~~pl~~~~~~R~~ly~l~~~l~~~~~fG~~~~~Y~~~~~~~~~~~~~  308 (312)
T 3jr1_A          253 TNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQSYVSLTQKLINQILH  308 (312)
T ss_dssp             HHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999   999999999999875

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=99.97  E-value=7.4e-30  Score=232.92  Aligned_cols=247  Identities=15%  Similarity=0.192  Sum_probs=169.2

Q ss_pred             cccccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCC
Q 020393           27 RRTFATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIR  105 (326)
Q Consensus        27 ~~~~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~  105 (326)
                      |+|||+++.+++.++|.+.+.+ ++.+++++++|..|.+|+|++++++||+|+++. .....+..|.+++++|+++ ++|
T Consensus         1 m~v~~~~~~~~l~~~l~~~~~~-~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~-g~~   78 (322)
T 2ppq_A            1 MAVYTDITEDELRNFLTQYDVG-SLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAK-GLS   78 (322)
T ss_dssp             ----CCCCHHHHHHHHTTBCCC-CEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHT-TCC
T ss_pred             CCccccCCHHHHHHHHHhCCCC-cceEeeccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHC-CCC
Confidence            8999999999999999987664 788999999999999999999999999999976 3456678899999999987 699


Q ss_pred             CcceeeecccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCcc
Q 020393          106 APRPFKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSN  176 (326)
Q Consensus       106 vP~~~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~  176 (326)
                      ||+++......     ++..+++|+|++|.+..    ..+.++|+.|++||+....   |+.+..+..+        ...
T Consensus        79 vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~~~~~~~--------~~~  147 (322)
T 2ppq_A           79 CPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEG---FEIKRPNALS--------VDG  147 (322)
T ss_dssp             CCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTT---CCCCCBCTTS--------HHH
T ss_pred             CCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhcc---CCCcccCccC--------hHH
Confidence            99999764321     36789999999998753    4578999999999998753   4322111110        013


Q ss_pred             HHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCc
Q 020393          177 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGH  255 (326)
Q Consensus       177 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~  255 (326)
                      |...+..  .   .... .. ..+.+.+.+++.++.+.+.+.. ..+.++||||+|++|||+++++.++|||| .+++|+
T Consensus       148 w~~~~~~--~---~~~~-~~-~~~~l~~~l~~~~~~l~~~~~~-~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g~  219 (322)
T 2ppq_A          148 WKVLWDK--S---EERA-DE-VEKGLREEIRPEIDYLAAHWPK-DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDL  219 (322)
T ss_dssp             HHHHHHH--H---GGGG-GG-TSTTHHHHHHHHHHHHHHHCCC-SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             HHHHHHH--H---HHHH-Hh-hhhhhHHHHHHHHHHHHhhCcc-cCCcccCCCCCCccCEEEeCCceEEEecchhccCch
Confidence            4332211  0   0000 00 1111112233333333322222 35789999999999999987765689997 689999


Q ss_pred             hhhhhhhhh---hc----CCC----hHhHHHhhhhCCCCcCHHHHHHHHH
Q 020393          256 NEAEFGMSW---CA----GFG----GSFYNSYFEVMPKQPGFEKRRDLYM  294 (326)
Q Consensus       256 ~~~Dla~~~---~~----~~~----~~fl~~Y~~~~~l~~~~~~r~~~y~  294 (326)
                      +.+||+.+.   +.    .+.    ++|+++|.+..|+++...+++..+.
T Consensus       220 ~~~Dla~~l~~~~~~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~~~l~~~~  269 (322)
T 2ppq_A          220 LAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLS  269 (322)
T ss_dssp             HHHHHHHHHHHHSBCTTSCBCHHHHHHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            999999752   21    132    5799999999999876666666554

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=99.95  E-value=6.9e-28  Score=218.85  Aligned_cols=267  Identities=13%  Similarity=0.133  Sum_probs=179.3

Q ss_pred             CCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccee
Q 020393           32 TLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPF  110 (326)
Q Consensus        32 ~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~  110 (326)
                      +++.+.+.+++.+..++..+.+++++++|..|.+|++   +++||+|+++.. ....++.|+++|++|++..+++||+++
T Consensus         2 ~~~~~~l~~~l~~~~p~~~~~~v~~l~~G~~n~v~~v---g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~   78 (306)
T 3tdw_A            2 KQNKLHYTTMIMTQFPDISIQSVESLGEGFRNYAILV---NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYV   78 (306)
T ss_dssp             --CHHHHHHHHHHHCTTSCCSCEEEEEECSSEEEEEE---TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEE
T ss_pred             CCCHHHHHHHHHHHCCCCCceeeeecCCCcceeEEEE---CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeE
Confidence            4677889999998877888899999999999999999   579999997542 234578999999999987789999999


Q ss_pred             eecccCCCceEEEEeeecCCCCC-------------CcHHHHHHHHHHHhhcCCCCC-CCCCCCCCcccccccCCCCCcc
Q 020393          111 KVGALPTGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSN  176 (326)
Q Consensus       111 ~~~~~~~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~-~fg~~~~~~~~~~~~~~~~~~~  176 (326)
                      ..+...++..|++|+|++|.++.             ....++|+.|++||+.+.+.. ..|.+         .     ..
T Consensus        79 ~~~~~~~g~~~~v~e~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p---------~-----~~  144 (306)
T 3tdw_A           79 YIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVP---------V-----TN  144 (306)
T ss_dssp             EEEECTTSCEEEEEECCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCC---------B-----CC
T ss_pred             eecccCCCceEEEEeccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCC---------h-----HH
Confidence            88753367899999999998763             135889999999999886310 01211         1     14


Q ss_pred             HHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHh-cc-cccCCCCCcceeecCCCCCCeeecC----CCCeEEEcc-
Q 020393          177 WIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNL-AP-LFEGVNVEPCLLHGDLWSGNISSDK----NGEPVILDP-  249 (326)
Q Consensus       177 w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~l~~~~~~~~LiHgDl~~~NiL~~~----~~~~~iID~-  249 (326)
                      |...+..  ....++.......+......+.+..+.+ .. .+.  ..++++||||+|++|||+++    ++.++|||| 
T Consensus       145 w~~~~~~--~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~--~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~  220 (306)
T 3tdw_A          145 LKNKILL--LSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYT--RYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFG  220 (306)
T ss_dssp             HHHHHHH--HHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHH--CCCCEEECSCCSGGGEEECTTCSSCCEEEECCCT
T ss_pred             HHHHHHH--HHHHHHHhcccccchhhHHHHHHHHHHHHhCcccc--cCCCeeEeCCCCcccEEEecCCCCCceEEEEehh
Confidence            4433221  1111111110111111112222222111 11 111  36789999999999999987    334589998 


Q ss_pred             ccccCchhhhhhhhhh---cCCChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHh----c-cCcHHHHHHHHHHHH
Q 020393          250 ACYYGHNEAEFGMSWC---AGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF----G-SGYRSSALSIIDDYL  321 (326)
Q Consensus       250 ~~~~G~~~~Dla~~~~---~~~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~----~-~~~~~~~~~~~~~~~  321 (326)
                      .+.+|||++||+.+..   ..+.+.|++ |++....++. .+|..+|.++..+. +..|    | ..+...+..+|+++-
T Consensus       221 ~a~~gd~~~Dla~~~~~~~~~~~~~~~~-Y~~~~~~~~~-~~r~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~l~~~~  297 (306)
T 3tdw_A          221 DAAISDPDYDYVYLLEDCGELFTRQVMA-YRGEVDLDTH-IRKVSLFVTFDQVS-YLLEGLRARDQDWISEGLELLEEDK  297 (306)
T ss_dssp             TCEEECGGGGGHHHHHHTCHHHHHHHHH-HTTCSCHHHH-HHHHHHHHHHHHHH-HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHhcCHHHHHHHHH-hcccccCCCH-HHHHHHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHhh
Confidence            6899999999997632   123467899 9876322222 78999998876553 3233    3 367888888888875


Q ss_pred             H
Q 020393          322 R  322 (326)
Q Consensus       322 ~  322 (326)
                      +
T Consensus       298 ~  298 (306)
T 3tdw_A          298 A  298 (306)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.94  E-value=2e-25  Score=206.81  Aligned_cols=250  Identities=16%  Similarity=0.213  Sum_probs=166.1

Q ss_pred             cCCCchhHHHHHHhcCCC-cceeeEeEeCCccccceEEEEeCCccEEEEecC--CC----CcchHHHHHHHHHHHHhcCC
Q 020393           31 ATLSDDPIREWILSEGKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNR--SI----GPSMFEGEALGLGAMYETRT  103 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~~~~-~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~--~~----~~~~~~~E~~~l~~L~~~~~  103 (326)
                      .+++.+.+.+||.+..++ ....+++++++|.+|.+|++++++++||+|..+  ..    ....+..|+++++.|++. +
T Consensus        19 ~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~-~   97 (359)
T 3dxp_A           19 QRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT-D   97 (359)
T ss_dssp             -CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTS-S
T ss_pred             cCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC-C
Confidence            457889999999988544 357889999999999999999988999999987  42    234678999999999984 7


Q ss_pred             CCCcceeeecccC--CCceEEEEeeecCCCCC-------------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccc
Q 020393          104 IRAPRPFKVGALP--TGGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTP  168 (326)
Q Consensus       104 ~~vP~~~~~~~~~--~~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~  168 (326)
                      +|||+++..+...  .|..|+||||++|..+.             ....++++.|++||+...+.  ++....   +.  
T Consensus        98 vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~--~~~~~~---~~--  170 (359)
T 3dxp_A           98 VPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQA--IGLGDY---GK--  170 (359)
T ss_dssp             SCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTT--TTCTTS---SC--
T ss_pred             CCCCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchh--cccccc---CC--
Confidence            9999999886542  26799999999998762             12688999999999988642  222110   00  


Q ss_pred             cCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCC-CCcceeecCCCCCCeeecCCCC--eE
Q 020393          169 QINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVN-VEPCLLHGDLWSGNISSDKNGE--PV  245 (326)
Q Consensus       169 ~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~-~~~~LiHgDl~~~NiL~~~~~~--~~  245 (326)
                          . ..+..    .++..+.+........  ....++++.+.+...+.... .++++||||+|++|||+++++.  .+
T Consensus       171 ----~-~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~  239 (359)
T 3dxp_A          171 ----P-GNYFQ----RQIERWTKQYKLSETE--SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA  239 (359)
T ss_dssp             ----C-SCHHH----HHHHHHHHHHHHHCCS--CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred             ----C-CCchH----HHHHHHHHHHHhcCCc--CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence                0 11111    1122222221111111  12344555555544443211 2589999999999999987753  58


Q ss_pred             EEcc-ccccCchhhhhhhhh-h---c---------------CC--ChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHH
Q 020393          246 ILDP-ACYYGHNEAEFGMSW-C---A---------------GF--GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNH  301 (326)
Q Consensus       246 iID~-~~~~G~~~~Dla~~~-~---~---------------~~--~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~  301 (326)
                      |||| .+.+|||++||+.+. .   .               ++  .++|+++|++..+.+.  ..++.+|..+..+.+
T Consensus       240 viDwe~a~~g~p~~DLa~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~Y~~~~g~~~--~~~~~~~~~~~~~r~  315 (359)
T 3dxp_A          240 VLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPI--TGDWNFYLAFSMFRI  315 (359)
T ss_dssp             ECCCTTCEEECHHHHHHHHGGGGTSCSSSSCCCTTSCHHHHTCCCHHHHHHHHHHHHSSCC--CSCHHHHHHHHHHHH
T ss_pred             EECccccccCCHHHHHHHHHHHhccCccccccccCCCccCCCCCCHHHHHHHHHHHhCCCC--cccchHHHHHHHHHH
Confidence            9997 689999999999652 1   1               11  2579999999876542  134455555554444

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=99.94  E-value=5.9e-26  Score=210.04  Aligned_cols=252  Identities=16%  Similarity=0.161  Sum_probs=164.1

Q ss_pred             hhHHHHHHhcCCC---cceeeEeEe-CCccccceEEEEeC--------CccEEEEecCCCC------cchHHHHHHHHHH
Q 020393           36 DPIREWILSEGKA---THITKICPV-GGGCINLASRYGTD--------AGSFFVKTNRSIG------PSMFEGEALGLGA   97 (326)
Q Consensus        36 ~~i~~~l~~~~~~---~~v~~v~~l-~~G~~n~~y~v~~~--------~~~~vlK~~~~~~------~~~~~~E~~~l~~   97 (326)
                      +.+++||.+..++   .++.+++++ ++|.+|.+|+|+++        +++||+|+++...      ...++.|++++++
T Consensus         4 ~~l~~~l~~~~~~~~~~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~   83 (357)
T 3ats_A            4 AVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRL   83 (357)
T ss_dssp             HHHHHHHHHHSCTTCCCEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcCCCceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHH
Confidence            6789999988443   257889999 99999999999876        4589999987532      2567899999999


Q ss_pred             HHhcCCCCCcceeeecccC--CCceEEEEeeecCCCCCC---------------------cHHHHHHHHHHHhhcCCCC-
Q 020393           98 MYETRTIRAPRPFKVGALP--TGGSYIIMEFIEFGSSRG---------------------NQSVFGKKLAEMHKAGKSS-  153 (326)
Q Consensus        98 L~~~~~~~vP~~~~~~~~~--~~~~~~v~e~l~G~~~~~---------------------~~~~lg~~La~lH~~~~~~-  153 (326)
                      |++.++++||+++..+...  .+..|+||||++|..+..                     ..+++|+.|++||+...+. 
T Consensus        84 L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~  163 (357)
T 3ats_A           84 VGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQN  163 (357)
T ss_dssp             HHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHH
T ss_pred             HhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccC
Confidence            9987679999999876542  267899999999986431                     1578999999999987521 


Q ss_pred             --CCCCCCC--CCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCC--CCccee
Q 020393          154 --KGFGFDV--DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVN--VEPCLL  227 (326)
Q Consensus       154 --~~fg~~~--~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~--~~~~Li  227 (326)
                        ..|+.+.  .....      .....|.+.+         ..........   ..++++.+.+.+.+....  .++++|
T Consensus       164 ~l~~~~~~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~---~~~~~~~~~l~~~~p~~~~~~~~~l~  225 (357)
T 3ats_A          164 TFSFLTQGRTSDTTLH------RHFNWVRSWY---------DFAVEGIGRS---PLLERTFEWLQSHWPDDAAAREPVLL  225 (357)
T ss_dssp             HTGGGC-----CCHHH------HHHHHHHHHH---------HHHHHHHCCC---HHHHHHHHHHHHTCCHHHHHSCCEEE
T ss_pred             ChhhccCCCCCCchHH------HHHHHHHHHH---------HhhccCCCCC---hHHHHHHHHHHHhCCCcccCCCceEE
Confidence              0111000  00000      0001111111         1110000111   122233333222221100  268999


Q ss_pred             ecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh-h-------------cCC-----ChHhHHHhhhhCCCCcCHH
Q 020393          228 HGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW-C-------------AGF-----GGSFYNSYFEVMPKQPGFE  287 (326)
Q Consensus       228 HgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~-~-------------~~~-----~~~fl~~Y~~~~~l~~~~~  287 (326)
                      |||+|++|||+++++.++|||| .+.+|||++||+.+. .             .++     .++|+++|++..+++.   
T Consensus       226 HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~~Dla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~---  302 (357)
T 3ats_A          226 WGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVEL---  302 (357)
T ss_dssp             CSSCSGGGEEEETTEEEEECCGGGCEEECHHHHHHHHHHHHHHHHHHHHHTTCCCCTTSSCHHHHHHHHHHHHCCCC---
T ss_pred             eCCCCCCeEEEeCCcEEEEEcccccccCCcHHHHHHHHhhcccccccccccCCCCCCCcccHHHHHHHHHHHhCCCc---
Confidence            9999999999986555799997 689999999999642 1             133     3589999999887753   


Q ss_pred             HHHHHHHHHHHHHHHHHhccC
Q 020393          288 KRRDLYMLYHYLNHYNLFGSG  308 (326)
Q Consensus       288 ~r~~~y~l~~~l~~~~~~~~~  308 (326)
                      +++.+|.++..+.+...++..
T Consensus       303 ~~~~~~~~~~~~r~~~~~~~~  323 (357)
T 3ats_A          303 GDLHWFYVYSGVMWACVFMRT  323 (357)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHH
T ss_pred             hhchHHHHHHHHHHHHHHHHH
Confidence            356677766666555555433

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.93  E-value=5.1e-25  Score=199.55  Aligned_cols=262  Identities=18%  Similarity=0.167  Sum_probs=175.9

Q ss_pred             CCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCccee
Q 020393           32 TLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPF  110 (326)
Q Consensus        32 ~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~  110 (326)
                      .++.+.++++|.+..++..+.+++++++|..|.+|+++   ++||+|+++.. ....++.|+++++.|++..+++||+++
T Consensus         3 ~~~~~~l~~~l~~~~p~~~~~~i~~~~~G~~n~v~~v~---~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~   79 (304)
T 3sg8_A            3 TYTFDQVEKAIEQLYPDFTINTIEISGEGNDCIAYEIN---RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVV   79 (304)
T ss_dssp             CCCHHHHHHHHHHHCTTCCCCCCCEEEECSSEEEEEST---TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEE
T ss_pred             cCCHHHHHHHHHHhCCCccceeeEecCCCCcceEEEEC---CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceE
Confidence            46889999999988777778889999999999999985   68999998753 235678999999999877789999999


Q ss_pred             eecccCC--CceEEEEeeecCCCCC-------------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCc
Q 020393          111 KVGALPT--GGSYIIMEFIEFGSSR-------------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTS  175 (326)
Q Consensus       111 ~~~~~~~--~~~~~v~e~l~G~~~~-------------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~  175 (326)
                      ..+....  +..|+||+|++|.++.             ..+.++|+.|++||+...+    |++..          .+..
T Consensus        80 ~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~----~~~~~----------~~~~  145 (304)
T 3sg8_A           80 FTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINIS----GFKSN----------LVLD  145 (304)
T ss_dssp             EECCCCSSCSCSCEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCT----TSCGG----------GBCC
T ss_pred             eecCCCCCCCcceEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCC----CCCcc----------chhh
Confidence            8865422  4679999999998764             2357899999999998763    22110          1223


Q ss_pred             cHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHH-hcccccCCCCCcceeecCCCCCCeeecC--CCCeEEEcc-cc
Q 020393          176 NWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKN-LAPLFEGVNVEPCLLHGDLWSGNISSDK--NGEPVILDP-AC  251 (326)
Q Consensus       176 ~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~LiHgDl~~~NiL~~~--~~~~~iID~-~~  251 (326)
                      .|..+...  .. .+........+....+.+.++.+. +...... ..++++||||++++||++++  ++..+|||| .+
T Consensus       146 ~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~  221 (304)
T 3sg8_A          146 FREKINED--NK-KIKKLLSRELKGPQMKKVDDFYRDILENEIYF-KYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDA  221 (304)
T ss_dssp             HHHHHHHH--HH-HHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGT-CCCCEEECSCCCGGGEEEETTTTEEEEECCCTTC
T ss_pred             HHHHHHHH--HH-HHHHHhcccCCcccHHHHHHHHHHHHhccccc-cCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCC
Confidence            44433321  11 111111111222222333333333 2222211 46789999999999999988  445789997 68


Q ss_pred             ccCchhhhhhhhhh--cCCC----hHhHHHhhhhCCCC-cCHHHHHHHHHHHHHHHHHHHh----c-cCcHHHHHHHHH
Q 020393          252 YYGHNEAEFGMSWC--AGFG----GSFYNSYFEVMPKQ-PGFEKRRDLYMLYHYLNHYNLF----G-SGYRSSALSIID  318 (326)
Q Consensus       252 ~~G~~~~Dla~~~~--~~~~----~~fl~~Y~~~~~l~-~~~~~r~~~y~l~~~l~~~~~~----~-~~~~~~~~~~~~  318 (326)
                      .+|||++||+.+..  ..+.    +.|+++|..   .+ +++.+|+.+|..+..+.. ..+    | ..|...+...|+
T Consensus       222 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~---~~~~~~~~r~~~~~~~~~l~~-~~~~~~~g~~~~~~~g~~~~~  296 (304)
T 3sg8_A          222 AISDPDNDFISLMEDDEEYGMEFVSKILNHYKH---KDIPTVLEKYRMKEKYWSFEK-IIYGKEYGYMDWYEEGLNEIR  296 (304)
T ss_dssp             EEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC---SCHHHHHHHHHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHT
T ss_pred             ccCChHHHHHHHHhhccccCHHHHHHHHHHcCC---CCcHHHHHHHHHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHHH
Confidence            89999999997632  2243    467888843   23 567888888876654422 222    2 346666655543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=99.93  E-value=5.7e-25  Score=201.62  Aligned_cols=251  Identities=16%  Similarity=0.157  Sum_probs=159.9

Q ss_pred             CchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeec
Q 020393           34 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG  113 (326)
Q Consensus        34 ~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~  113 (326)
                      +.+++.++|.+. ++.++.+++++++|..|.+|+|++++++||+|+.+.. ...+..|.+++++|++. +++||+++...
T Consensus        18 ~~~~l~~~l~~~-~~~~~~~~~~l~gG~~n~~~~v~~~~~~~vlk~~~~~-~~~~~~e~~~l~~L~~~-g~~vp~~~~~~   94 (346)
T 2q83_A           18 KLTELAENVLQG-WDVQAEKIDVIQGNQMALVWKVHTDSGAVCLKRIHRP-EKKALFSIFAQDYLAKK-GMNVPGILPNK   94 (346)
T ss_dssp             HHHHHHHHHGGG-SCCCCCEEEECC----CEEEEEEETTEEEEEEEECSC-HHHHHHHHHHHHHHHHH-TCSSCCBCCCT
T ss_pred             HHHHHHHHHHHH-cCCceEEeeeccccccCcEEEEEeCCCCEEEEecCCC-HHHHHHHHHHHHHHHHc-CCCCCceeecC
Confidence            346677777655 4557889999988899999999999899999999763 34456788999999987 58999999753


Q ss_pred             ccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHh
Q 020393          114 ALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH  184 (326)
Q Consensus       114 ~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~  184 (326)
                      ...     .+..+++|+|++|.++.    ..+.++|+.|++||+....   +..+....      .......|.+.+...
T Consensus        95 ~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~~~~~------~~~~~~~~~~~~~~~  165 (346)
T 2q83_A           95 KGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVG---YQPPNGVP------IFTKLGRWPNHYTKR  165 (346)
T ss_dssp             TSCSCEEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTT---CCCCTTCC------CCBCTTCHHHHHHHH
T ss_pred             CCCEEEEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCC---CCCCccch------hcccccchHHHHHHH
Confidence            221     46789999999998653    3578999999999998763   22111100      001123454443211


Q ss_pred             --hhHHHHHHHHhhcCCh----------HHHHHHHHHHHHhcc-----cccCCCCCcceeecCCCCCCeeecCCCCeEEE
Q 020393          185 --RLGYQLKLALDQYGDS----------TIYQRGHRLMKNLAP-----LFEGVNVEPCLLHGDLWSGNISSDKNGEPVIL  247 (326)
Q Consensus       185 --~l~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~-----~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iI  247 (326)
                        .+....+.......+.          ...+.+++.++.+..     +......++++||||+|++|||+++++..+||
T Consensus       166 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lI  245 (346)
T 2q83_A          166 CKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVI  245 (346)
T ss_dssp             HHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEEC
T ss_pred             HHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEE
Confidence              1111111111000000          001112222222211     00000146899999999999999767779999


Q ss_pred             cc-ccccCchhhhhhhhh---h---cCCC----hHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          248 DP-ACYYGHNEAEFGMSW---C---AGFG----GSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       248 D~-~~~~G~~~~Dla~~~---~---~~~~----~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      || .+.+|+|++||+.+.   +   ..+.    ++|+++|.+..|+++...+++..+.++
T Consensus       246 Dfe~a~~g~~~~Dla~~l~~~~~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~~~l~~~~~~  305 (346)
T 2q83_A          246 DLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLF  305 (346)
T ss_dssp             CCTTCEECCTHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHS
T ss_pred             ehhhcccCChHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHC
Confidence            98 588999999999752   2   2233    579999999999987766666666554

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=99.93  E-value=4.7e-25  Score=201.57  Aligned_cols=246  Identities=16%  Similarity=0.164  Sum_probs=167.9

Q ss_pred             ccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCC
Q 020393           30 FATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA  106 (326)
Q Consensus        30 ~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~v  106 (326)
                      |+.++.+.|.++|.+.|.... .++++++ |..|.+|+|++++| +||+|++++.  +...+..|..++++|++. +++|
T Consensus         8 ~~~l~~~~i~~~l~~~g~~~~-~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~-g~~v   84 (328)
T 1zyl_A            8 FQTLHPDTIMDALFEHGIRVD-SGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVND-EVPV   84 (328)
T ss_dssp             CCCCCHHHHHHHHHHTTCCCC-SCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT-TCSB
T ss_pred             CCCCCHHHHHHHHHHcCCCCC-ceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHc-CCee
Confidence            678899999999977754321 3677787 88999999998777 7999999742  345677899999999987 6999


Q ss_pred             cceeee-cccC---CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHH
Q 020393          107 PRPFKV-GALP---TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI  178 (326)
Q Consensus       107 P~~~~~-~~~~---~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~  178 (326)
                      |+++.. +...   +|..+++|+|++|..+.    ...+++|+.|++||+....   +.+..         ...|  ++.
T Consensus        85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~---~~~~~---------~~~~--~~~  150 (328)
T 1zyl_A           85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRK---QLFIH---------RPTI--GLN  150 (328)
T ss_dssp             CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTS---SCCSS---------SCBC--SHH
T ss_pred             cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhcc---CCCcc---------CCCC--CHH
Confidence            999986 2111   46778999999998653    4578999999999998864   21110         0111  233


Q ss_pred             HHHHHhhhHHHHHHHHhhcCCh----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-cccc
Q 020393          179 EFYAEHRLGYQLKLALDQYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYY  253 (326)
Q Consensus       179 ~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~  253 (326)
                      .+...  ....++.  ....+.    ...+.++++++.+...+.. ..+.++||||+|++|||++ + .++|||| .+.+
T Consensus       151 ~~~~~--~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          151 EYLIE--PRKLFED--ATLIPSGLKAAFLKATDELIAAVTAHWRE-DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HHTHH--HHHHHHT--CSSSCTTTHHHHHHHHHHHHHHHHHHCCS-CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HHHhh--HHHHHhh--cCcCCHHHHHHHHHHHHHHHHHHHHHhhh-cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            22211  1111111  001111    1233444445444444432 2578999999999999998 5 6899997 6899


Q ss_pred             CchhhhhhhhhhcC------CChHhHHHhhhhCCCCcCHHHHHHHHHHHHHH
Q 020393          254 GHNEAEFGMSWCAG------FGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYL  299 (326)
Q Consensus       254 G~~~~Dla~~~~~~------~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l  299 (326)
                      |++++||+++..+.      ..++|+++|.+..++++....++..+.....+
T Consensus       224 g~~~~Dla~~l~~~~~~~~~~~~~~l~~Y~~~~~l~~~e~~~l~~~~~~r~l  275 (328)
T 1zyl_A          224 GPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLV  275 (328)
T ss_dssp             ECTTHHHHTTCCSSHHHHHHHHHHHHHHHTTTSCCCGGGGGGHHHHHHHHHH
T ss_pred             CcHHHHHHHHhcCChHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            99999999764321      12579999999999886655666666544443

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=99.92  E-value=7.5e-25  Score=201.63  Aligned_cols=257  Identities=16%  Similarity=0.152  Sum_probs=162.8

Q ss_pred             CCCchhHHHHHHhcCCCcceeeEeEeCCcc--ccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCC-Ccc
Q 020393           32 TLSDDPIREWILSEGKATHITKICPVGGGC--INLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIR-APR  108 (326)
Q Consensus        32 ~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~--~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~-vP~  108 (326)
                      +++.+++.+++.+. ++..+.+++++.+|.  .|.+|+|++++|+||+|+++...   ...|..++++|++. +++ ||+
T Consensus         5 ~l~~~~l~~~l~~~-ygl~~~~~~~l~~G~g~~N~vy~v~~~~g~~vLK~~~~~~---~~~E~~~l~~L~~~-g~~~vp~   79 (339)
T 3i1a_A            5 PIQAQQLIELLKVH-YGIDIHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYH---DEINLSIIRLLHDS-GIKEIIF   79 (339)
T ss_dssp             SSCTTHHHHHHHHH-HCCCCSEEEEETTTSCSSCEEEEEECSSCEEEEEEEECSS---CCHHHHHHHHHHHT-TCCSSCC
T ss_pred             CCCHHHHHHHHHHH-cCCCcceeEEeeccCccccceEEEEeCCCCEEEEEecCcc---chHHHHHHHHHHhc-CCccccc
Confidence            46789999998766 344567788886554  89999999988899999987643   25789999999986 799 999


Q ss_pred             eeeecccC-----CCceEEEEeeecCCCCC------CcHHHHHHHHHHHhhcCCCCC-CCCCCCCCcccccccCCCCCcc
Q 020393          109 PFKVGALP-----TGGSYIIMEFIEFGSSR------GNQSVFGKKLAEMHKAGKSSK-GFGFDVDNTIGSTPQINKWTSN  176 (326)
Q Consensus       109 ~~~~~~~~-----~~~~~~v~e~l~G~~~~------~~~~~lg~~La~lH~~~~~~~-~fg~~~~~~~~~~~~~~~~~~~  176 (326)
                      |+......     .+..+++|+|++|....      ..++++|+.||+||+...+.+ .++.+...+      ...|...
T Consensus        80 pi~~~~G~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~~lg~~La~LH~~~~~~~~~~~~~~~~~------~~~w~~~  153 (339)
T 3i1a_A           80 PIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIY------SPKWREI  153 (339)
T ss_dssp             CCCCTTSCSSEECSSEEEEEEECCCCCBTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTSEECCC------CCHHHHH
T ss_pred             ceecCCCCEEEEECCEEEEEEeccCCCcCcccCCCHHHHHHHHHHHHHHhCcCCCCCCccCcccccc------CcchHHH
Confidence            99864321     46789999999998752      357899999999999886311 011111000      0111111


Q ss_pred             HHHHHHHhh-------hHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc
Q 020393          177 WIEFYAEHR-------LGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP  249 (326)
Q Consensus       177 w~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~  249 (326)
                      +..++....       +.......... ....+...++++.+ +...+.....+.++||||+|++||++++++.++||||
T Consensus       154 i~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~-l~~~l~~~~~~~~~~HgD~~~~N~l~~~~~~~~~iD~  231 (339)
T 3i1a_A          154 VRSFYNQIEFDNSDDKLTAAFKSFFNQ-NSAAIHRLVDTSEK-LSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDW  231 (339)
T ss_dssp             HHHHGGGGSCCTTCCHHHHHHHHHHHH-THHHHHHHHHHHHH-HHHHCCCCGGGCEEECSCCCGGGEEECGGGCEEECCC
T ss_pred             HHHHHHhhhccccCCcHHHHHHHHHHH-hHHHHHHHHHHHHH-HHHHHhhCCCCceeEeCCCCcCCEEEeCCCeEEEEEC
Confidence            111111000       00000000000 00001111221111 1112222235789999999999999987777899997


Q ss_pred             -ccccCchhhhhhhhhh--cC--C----ChHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHh
Q 020393          250 -ACYYGHNEAEFGMSWC--AG--F----GGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF  305 (326)
Q Consensus       250 -~~~~G~~~~Dla~~~~--~~--~----~~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~  305 (326)
                       .+.+|+|++||+++..  ..  .    .+.|+++|.+.   ..+ .+++.+|.++..+..+..|
T Consensus       232 e~~~~~~~~~Dla~~~~~~~~~~~~~~~~~~fl~~Y~~~---~~d-~~~l~~y~~~r~l~~~~~~  292 (339)
T 3i1a_A          232 DEPMLAPKERDLMFIGGGVGNVWNKPHEIQYFYEGYGEI---NVD-KTILSYYRHERIVEDIAVY  292 (339)
T ss_dssp             SSCEEECTHHHHTTTTCCTTSCSCCHHHHHHHHHHHCCC---CCC-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeCCHHHHHHHHHhhhhhccCCHHHHHHHHHHhCCC---CCC-HHHhHHHHHHHHHHHHHHH
Confidence             6899999999997632  11  1    13699999865   223 3578999988888776544

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=99.92  E-value=1.7e-25  Score=198.93  Aligned_cols=234  Identities=12%  Similarity=0.105  Sum_probs=145.7

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeCCcccc-ceEEEEeCCc--cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           36 DPIREWILSEGKATHITKICPVGGGCIN-LASRYGTDAG--SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n-~~y~v~~~~~--~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      ..|...|...-.|.   +++++.+|.+| .+||++...+  +||+|..+......+..|++.|++|+.  .+|||+|+..
T Consensus        14 p~l~~~l~~~l~g~---~~~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~--~vPVP~v~~~   88 (272)
T 4gkh_A           14 PRLNSNLDADLYGY---RWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTA--FMPLPTIKHF   88 (272)
T ss_dssp             -----CHHHHHTTC---EEEEEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTT--TSCCCCEEEE
T ss_pred             hhhhHHHhccccCC---eEEEccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhcc--CCCcCeEEEE
Confidence            44444444432332   46677788888 5899987543  799999976545567899999999986  5899999988


Q ss_pred             cccCCCceEEEEeeecCCCCC-----------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHH
Q 020393          113 GALPTGGSYIIMEFIEFGSSR-----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFY  181 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~~~~-----------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~  181 (326)
                      +.. ++..|+||++++|.++.           ....++|+.|++||+.+.+.  +++...            ...+...+
T Consensus        89 ~~~-~~~~~lvme~l~G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~--~~~~~~------------~~~~~~~~  153 (272)
T 4gkh_A           89 IRT-PDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCN--CPFNSD------------RVFRLAQA  153 (272)
T ss_dssp             EEE-TTEEEEEEECCCSEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGG--CCBBCC------------HHHHHHHH
T ss_pred             EEE-CCeEEEEEEeeCCccccccccCCHHHHHHHHHHHHHHHHHhcCCCccc--CCcCcc------------cccchhhH
Confidence            655 57899999999998641           23578999999999987632  221100            00000000


Q ss_pred             HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhh
Q 020393          182 AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEF  260 (326)
Q Consensus       182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dl  260 (326)
                      .. +........ ............+++.+.+...... ..++++||||+|++|||+++++.++|||| .+.+|||++||
T Consensus       154 ~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~~Dl  230 (272)
T 4gkh_A          154 QS-RMNNGLVDA-SDFDDERNGWPVEQVWKEMHKLLPF-SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDL  230 (272)
T ss_dssp             HH-HHHTTCCCG-GGCCGGGTTCCHHHHHHHHHTTCCC-CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEETHHHH
T ss_pred             HH-HHHHhhhhh-hhccccccchHHHHHHHHHHhcccc-cCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCCHHHHH
Confidence            00 000000000 0000000111122333333322222 46789999999999999998877899997 68999999999


Q ss_pred             hhhh--hcCC----ChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          261 GMSW--CAGF----GGSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       261 a~~~--~~~~----~~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      ++++  +..+    .+.|+++|....+   + .+|+.+|.++
T Consensus       231 a~~~~~~~~~~~~~~~~fl~~Yg~~~~---d-~~rl~~Y~lL  268 (272)
T 4gkh_A          231 AILWNCLGEFSPSLQKRLFQKYGIDNP---D-MNKLQFHLML  268 (272)
T ss_dssp             HHHHHHHTTTCHHHHHHHHHHHTCSSC---C-HHHHHHHHHH
T ss_pred             HHHHHHhhhcCHHHHHHHHHHcCCCCC---C-HHHHHHHHHH
Confidence            9764  2233    3578999974322   3 4788888765

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=99.91  E-value=3.4e-23  Score=189.79  Aligned_cols=235  Identities=11%  Similarity=0.064  Sum_probs=146.5

Q ss_pred             chhHHHHHHhcCCCcceeeEeEeCCccccc-eEEEEeC-CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           35 DDPIREWILSEGKATHITKICPVGGGCINL-ASRYGTD-AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        35 ~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~-~y~v~~~-~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      .++++.||.+.+  ..+.+++++++|.+|. +|+++++ +++||+|..++.....+..|.+++++|++. +++||+++..
T Consensus         6 ~~~l~~~l~~~~--~~~~~~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~~~~~~e~~~l~~L~~~-g~~vP~v~~~   82 (333)
T 3csv_A            6 EDEIRDFLATHG--YADWNRTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNL-DISAPEIYAE   82 (333)
T ss_dssp             HHHHHHHHHHTT--CTTCEECC--------CCEEEECTTCCEEEEEECCTTTTCCSHHHHHHHHHHHHT-TCBCCCEEEE
T ss_pred             HHHHHHHHHhcC--CCCceeeECCCCCCCceEEEEEcCCCCeEEEEECCCCCCccccHHHHHHHHHHhC-CCCCCceeee
Confidence            478899999884  3568899999998887 7799875 668999998764324567899999999987 7999999997


Q ss_pred             cccCCCceEEEEeeecCCCCC-----------CcHHHHHHHHHHHhhcCCCCCCCC-CCCCCcccccccCCCCCccHHHH
Q 020393          113 GALPTGGSYIIMEFIEFGSSR-----------GNQSVFGKKLAEMHKAGKSSKGFG-FDVDNTIGSTPQINKWTSNWIEF  180 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~~~~-----------~~~~~lg~~La~lH~~~~~~~~fg-~~~~~~~~~~~~~~~~~~~w~~~  180 (326)
                      +..   ..+++||++.|..+.           ...+++|+.|++||+.+.+  .++ +......       .....|.++
T Consensus        83 d~~---~g~ll~e~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~--~~~~~~~~~~~-------~~~~~~~~~  150 (333)
T 3csv_A           83 EHA---RGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTP--ELARLDPETLS-------EMTRLAFSE  150 (333)
T ss_dssp             ETT---TTEEEECCCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCC--CCCBCCHHHHH-------HTTTHHHHT
T ss_pred             cCC---CCEEEEeeCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCc--cCCccCHHHHH-------HHHHHHHHH
Confidence            532   338999999886431           2457899999999998763  111 1000000       000112222


Q ss_pred             HHHhhhHHHHHHHHhhcCC-hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC----CCeEEEcc-ccccC
Q 020393          181 YAEHRLGYQLKLALDQYGD-STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYG  254 (326)
Q Consensus       181 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~----~~~~iID~-~~~~G  254 (326)
                      +....+          ... ......++++.+.+.+.+.  ..++++||||+|++|||++++    +.++|||| .+.+|
T Consensus       151 ~~~~~l----------~~~~~~~~~~l~~~~~~l~~~~~--~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          151 YRYAIL----------GDAAEDNRKRFEHRFAQILSAQL--EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HHHHHH----------SSCCHHHHHHHHHHHHHHHHHHC--CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             HHHHhc----------CCCcHHHHHHHHHHHHHHHHhcc--cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            211000          000 0112233333333322222  246799999999999999874    56899997 68999


Q ss_pred             chhhhhhhhhh---cCC----ChHhHHHhhhhCCCC-cCHHHHHHHHHHH
Q 020393          255 HNEAEFGMSWC---AGF----GGSFYNSYFEVMPKQ-PGFEKRRDLYMLY  296 (326)
Q Consensus       255 ~~~~Dla~~~~---~~~----~~~fl~~Y~~~~~l~-~~~~~r~~~y~l~  296 (326)
                      +|.+||+.+..   ..+    .++|+++|.+..+++ +.+.....++.+.
T Consensus       219 ~~~~DLa~ll~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~  268 (333)
T 3csv_A          219 HRAYDLVSLLQDARRDVPAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQ  268 (333)
T ss_dssp             CTTHHHHHHHSCTTSCCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhhcccccCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence            99999997632   122    257999999998886 3334444444433

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.91  E-value=2.5e-23  Score=183.15  Aligned_cols=215  Identities=15%  Similarity=0.144  Sum_probs=143.7

Q ss_pred             eEeEeC-CccccceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           53 KICPVG-GGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        53 ~v~~l~-~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      +++++. +|..|.+|++++++| ++|+|+.+......+..|.++++.|++. +++||+++..+.. .+..++||||++|.
T Consensus        23 ~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~-~~~vP~~~~~~~~-~~~~~~v~e~i~G~  100 (264)
T 1nd4_A           23 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATT-GVPCAAVLDVVTE-AGRDWLLLGEVPGQ  100 (264)
T ss_dssp             EEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTT-TCCBCCEEEEEEC-SSCEEEEEECCSSE
T ss_pred             ceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhC-CCCCCeEEEeccC-CCCCEEEEEecCCc
Confidence            456665 677899999988765 6999998765445688999999999887 7999999987654 46789999999998


Q ss_pred             CCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChH--
Q 020393          131 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDST--  201 (326)
Q Consensus       131 ~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~--  201 (326)
                      ++.       ..+.++|+.|++||+...+.  +.+                ..|...... .....+   .....+..  
T Consensus       101 ~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~~----------------~~~~~~~~~-~~~~~~---~~~~~~~~~~  158 (264)
T 1nd4_A          101 DLLSSHLAPAEKVSIMADAMRRLHTLDPAT--CPF----------------DHQAKHRIE-RARTRM---EAGLVDQDDL  158 (264)
T ss_dssp             ETTTSCCCHHHHHHHHHHHHHHHTTSCGGG--CCC----------------BCCHHHHHH-HHHHHH---HTTCCCTTSC
T ss_pred             ccCcCcCCHhHHHHHHHHHHHHHhCCCCCC--CCC----------------chHHHHHHH-HHHHHH---hcCCccchhh
Confidence            764       34688999999999977521  111                111111111 111111   11111110  


Q ss_pred             ----HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh-h-c-CC----C
Q 020393          202 ----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW-C-A-GF----G  269 (326)
Q Consensus       202 ----~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~-~-~-~~----~  269 (326)
                          ....+.++.+.+...+.. ..++++||||+|++|||+++++.++|||| .+.+|+|.+|++.+. . . .+    .
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~Dla~~~~~~~~~~~~~~~  237 (264)
T 1nd4_A          159 DEEHQGLAPAELFARLKARMPD-GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWA  237 (264)
T ss_dssp             CGGGTTCCHHHHHHHHHHTCCS-SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHHHHHHHHHHCHHHH
T ss_pred             hhhccCccHHHHHHHHHHhcCC-CCCeEEECCCCCCCcEEEECCcEEEEEcchhcccCChHHHHHHHHhhhhhhcCcHHH
Confidence                000122333333222322 35789999999999999987766789998 579999999999763 1 1 22    2


Q ss_pred             hHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          270 GSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       270 ~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      ++|+++|. ..+.+   .+|+.+|.++
T Consensus       238 ~~fl~~Y~-~~~~~---~~r~~~y~~l  260 (264)
T 1nd4_A          238 DRFLVLYG-IAAPD---SQRIAFYRLL  260 (264)
T ss_dssp             HHHHHHHT-CSSCC---HHHHHHHHHH
T ss_pred             HHHHHHhc-CcCCC---HHHHHHHHHH
Confidence            67999997 33333   6788888765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.89  E-value=1.1e-22  Score=179.89  Aligned_cols=211  Identities=14%  Similarity=0.116  Sum_probs=137.5

Q ss_pred             eCCccccceEEEEeCCccEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC
Q 020393           57 VGGGCINLASRYGTDAGSFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR  133 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~  133 (326)
                      .++|..|.+|++++++++||+|..+.   .....++.|++++++|++  +++||+++..+.. .+..|+||||++|.++.
T Consensus        22 ~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~--~~~vP~v~~~~~~-~~~~~lv~e~i~G~~l~   98 (263)
T 3tm0_A           22 TEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG--KLPVPKVLHFERH-DGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             CSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT--TSCCCCEEEEEEE-TTEEEEEEECCSSEEHH
T ss_pred             ccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc--CCCCCeEEEEEec-CCceEEEEEecCCeehh
Confidence            34566789999998888999999874   334568899999999976  4899999987654 57899999999998641


Q ss_pred             ----------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHH----hh-cC
Q 020393          134 ----------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL----DQ-YG  198 (326)
Q Consensus       134 ----------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~----~~-~~  198 (326)
                                ..+.++|+.|++||+.+...  +++                ..|...... .....+....    .. ..
T Consensus        99 ~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~--~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           99 EEYEDEQSPEKIIELYAECIRLFHSIDISD--CPY----------------TNSLDSRLA-ELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             HHCCTTTCHHHHHHHHHHHHHHHHHSCCTT--CSC----------------BCCHHHHHH-HHHHHHHTTCSCCSGGGGS
T ss_pred             hccCCcccHHHHHHHHHHHHHHHhCCCccc--CCC----------------cchHHHHHH-HHHHHHhcccccccccccc
Confidence                      23588999999999977531  111                011111111 0111110000    00 00


Q ss_pred             ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh-hh--cC-----CC
Q 020393          199 DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS-WC--AG-----FG  269 (326)
Q Consensus       199 ~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~-~~--~~-----~~  269 (326)
                      ........+++.+.+.....  ..++++||||+|++|||+++++.++|||| .+.+|||.+||+.+ +.  ..     +.
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~--~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~gd~~~Dla~~~~~~~~~~~~~~~~  237 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKP--EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYV  237 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCC--CCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEEEHHHHHHHHHHHHHHHTCCTHHH
T ss_pred             ccccCCCHHHHHHHHHhcCC--CCCceEECCCCCcCcEEEECCcEEEEEEchhcccCCHHHHHHHHHHHhhhccCcHHHH
Confidence            00000112233333332222  35789999999999999987666789997 58999999999975 21  11     34


Q ss_pred             hHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          270 GSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       270 ~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      +.|+++|+.  ..+   .+++.+|.++
T Consensus       238 ~~~~~~Y~~--~~d---~~~~~~~~~l  259 (263)
T 3tm0_A          238 ELFFDLLGI--KPD---WEKIKYYILL  259 (263)
T ss_dssp             HHHHHHHTS--CCC---HHHHHHHHHH
T ss_pred             HHHHHHhCC--CCC---HHHHHHHHHH
Confidence            579999985  223   4678888654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=99.89  E-value=5.8e-23  Score=194.35  Aligned_cols=221  Identities=18%  Similarity=0.181  Sum_probs=144.0

Q ss_pred             ccccccCCCchhHHHHHH---hcC---CCc---ceeeEeEeCCccccceEEEEeCCccEEEEecCC-------C---Ccc
Q 020393           26 KRRTFATLSDDPIREWIL---SEG---KAT---HITKICPVGGGCINLASRYGTDAGSFFVKTNRS-------I---GPS   86 (326)
Q Consensus        26 ~~~~~~~~~~~~i~~~l~---~~~---~~~---~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-------~---~~~   86 (326)
                      .|++|++++.+.+.+++.   +.+   ...   ...+++++++|..|.+|+|++++++||+|...+       .   ...
T Consensus         2 ~~~~~~~l~~~~~~~yl~~~~~~~~~~~~~~~~~~~~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~   81 (420)
T 2pyw_A            2 SFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKE   81 (420)
T ss_dssp             -CCSCCCCCTTHHHHHHHTCHHHHHHHTTTTCCCCCEEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTT
T ss_pred             CccccccCChhhHHHHHhchhhhhhhcCCcccccceEEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchh
Confidence            488999999999999999   322   333   457899999999999999987767999994322       0   113


Q ss_pred             hHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee-cCCC-----------CCCcHHHHHHHHHHHhhcCCCC-
Q 020393           87 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI-EFGS-----------SRGNQSVFGKKLAEMHKAGKSS-  153 (326)
Q Consensus        87 ~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l-~G~~-----------~~~~~~~lg~~La~lH~~~~~~-  153 (326)
                      ....|.+++..++...+++||+++..+   .+..++||||+ +|..           ....++++|+.|+++|...... 
T Consensus        82 ~~~~E~e~l~~~~~~~~~~vP~v~~~~---~~~~~lv~e~l~~g~~~l~~~l~~~~~~~~~~~~lg~~La~lH~~~~~~~  158 (420)
T 2pyw_A           82 RAYFEATTLRKHGNLSPDHVPEVYHFD---RTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLY  158 (420)
T ss_dssp             HHHHHHHHHHHHHHHSGGGSCCEEEEE---TTTTEEEECCCCTTCEEHHHHHHHTCCCTTHHHHHHHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHHHHHhhCCCCCCeEEEEC---CCccEEEEeecCCcchhHHHHHhcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence            345677777777766568999999987   46889999999 8821           1246899999999999887531 


Q ss_pred             ----------CCCCCCC------CCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccc
Q 020393          154 ----------KGFGFDV------DNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLF  217 (326)
Q Consensus       154 ----------~~fg~~~------~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l  217 (326)
                                +.||+..      ....+..+..+.|...|..    ..+.......   ..+..+...++++.+.+..  
T Consensus       159 ~~~~~~~~~~~~fg~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~l---~~~~~l~~~~~~l~~~~~~--  229 (420)
T 2pyw_A          159 HDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRVSTFNRWTS----PYLDDDAKAV---REDSALKLEIAELKSMFCE--  229 (420)
T ss_dssp             SCHHHHHHHHHHHGGGHHHHHHHHHHTTTGGGSCCTTCCCST----TTTHHHHHHH---TTCHHHHHHHHHHHHHHHH--
T ss_pred             cChhhhHHHHHhcCCCHHHHHhhhhhcccccccccccccCCc----HhHHHHHHHh---hcCHHHHHHHHHHHHHHhc--
Confidence                      0122111      0001112222333333320    0011110000   0122223334443333221  


Q ss_pred             cCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          218 EGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       218 ~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                          .+++|||||||++|||+++++ ++|||| .+.+|+|.+||+.+
T Consensus       230 ----~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~  271 (420)
T 2pyw_A          230 ----RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAY  271 (420)
T ss_dssp             ----BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHH
T ss_pred             ----CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHH
Confidence                468999999999999998776 999997 68999999999965

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=99.89  E-value=9.3e-22  Score=177.84  Aligned_cols=253  Identities=15%  Similarity=0.126  Sum_probs=159.2

Q ss_pred             hHHHHHHhcCCC-cceeeEeEeCCccccceEEEEeCCccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCCcceeeec
Q 020393           37 PIREWILSEGKA-THITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVG  113 (326)
Q Consensus        37 ~i~~~l~~~~~~-~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~  113 (326)
                      .+...+.+. +. .+...++++++|.+|.+|++    ++||+|+++....  ...+.|..+++.+++. +++ |+++..+
T Consensus         6 ~~~~~i~~~-p~l~~~~~i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~-g~~-P~~~~~~   78 (301)
T 3dxq_A            6 EARAKLAAI-PMLAGYTGPLERLGGLTNLVFRA----GDLCLRIPGKGTEEYINRANEAVAAREAAKA-GVS-PEVLHVD   78 (301)
T ss_dssp             HHHHHTTTC-TTTTTCCSCEEEESCSSEEEEEE----TTEEEEEECC----CCCHHHHHHHHHHHHHT-TSS-CCEEEEC
T ss_pred             HHHHHHHhC-CccccccceeEcCCcccccccee----eeEEEECCCCCccceeCHHHHHHHHHHHHHc-CCC-CceEEEE
Confidence            445555555 22 13556999999999999999    7899999976322  2246799999999986 577 9999876


Q ss_pred             ccCCCceEEEEeee-cCCCCC--------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHh
Q 020393          114 ALPTGGSYIIMEFI-EFGSSR--------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEH  184 (326)
Q Consensus       114 ~~~~~~~~~v~e~l-~G~~~~--------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~  184 (326)
                      .   ...+++++|+ +|.++.        ....++|+.|++||+....   ++..             + ..|      .
T Consensus        79 ~---~~~~~v~e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~---~~~~-------------~-~~~------~  132 (301)
T 3dxq_A           79 P---ATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAV---FPFR-------------F-ELF------A  132 (301)
T ss_dssp             T---TTCCEEEECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCC---CSSB-------------C-CHH------H
T ss_pred             C---CCCEEEEeecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCC---CCCC-------------C-CHH------H
Confidence            3   4578999999 887763        2468999999999997642   2210             0 011      1


Q ss_pred             hhHHHHHHHHhhcC-ChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhh
Q 020393          185 RLGYQLKLALDQYG-DSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGM  262 (326)
Q Consensus       185 ~l~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~  262 (326)
                      ++..+.+...+... .+...+.+.+..+.+...+.....++++||||+|++|||. +++..+|||| .+.+|||.+||+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil~-~~~~~~lID~e~a~~g~~~~Dla~  211 (301)
T 3dxq_A          133 MIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLD-TGERMWIVDWEYSGMNDPLWDLGD  211 (301)
T ss_dssp             HHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEEE-CSSCEEECCCTTCEEECTHHHHHH
T ss_pred             HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEEE-CCCCEEEEecccccCCCHHHHHHH
Confidence            23333322222111 1111122233333333233222467899999999999995 4555799997 6899999999997


Q ss_pred             hhh-cCCC----hHhHHHhhhhCCCCcCHHHHHHHHHHHHHHHHHHHh------cc---CcHHHHHHHHHHHHHHh
Q 020393          263 SWC-AGFG----GSFYNSYFEVMPKQPGFEKRRDLYMLYHYLNHYNLF------GS---GYRSSALSIIDDYLRML  324 (326)
Q Consensus       263 ~~~-~~~~----~~fl~~Y~~~~~l~~~~~~r~~~y~l~~~l~~~~~~------~~---~~~~~~~~~~~~~~~~~  324 (326)
                      +.+ ..++    +.|+++|.+..+. +....++..|.+...+.+..+.      +.   .|..-+..=++++.+.+
T Consensus       212 ~~~~~~~~~~~~~~~l~~Y~~~~~~-~~~~~~~~~~~~~~~~~w~~W~~~q~~~~~~~~d~~~ya~~r~~~~~~~~  286 (301)
T 3dxq_A          212 LSVEGKFNANQDEELMRAYFGGEAR-PAERGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFARCKALM  286 (301)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHh
Confidence            643 3444    4799999876543 3335677777665554332111      22   46666655555555544

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=99.86  E-value=2.9e-20  Score=176.16  Aligned_cols=217  Identities=17%  Similarity=0.151  Sum_probs=139.3

Q ss_pred             hhHHHHHHhc-CCC-----cceeeEeEeCCccccceEEEEeCC---------ccEEEEecCCCCc-chHHHHHHHHHHHH
Q 020393           36 DPIREWILSE-GKA-----THITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIGP-SMFEGEALGLGAMY   99 (326)
Q Consensus        36 ~~i~~~l~~~-~~~-----~~v~~v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~~-~~~~~E~~~l~~L~   99 (326)
                      +.+.+++.+. ++.     .+..+++++++|.+|.+|+|++++         +++|+|++..... ..+..|..+++.|+
T Consensus        54 ~~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~  133 (429)
T 1nw1_A           54 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS  133 (429)
T ss_dssp             HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHH
Confidence            4455666653 322     246789999999999999999753         5899999965222 44567999999999


Q ss_pred             hcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393          100 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  172 (326)
Q Consensus       100 ~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~  172 (326)
                      +. ++ +|+++....   +  .+|++|++|..+.       ....++|+.|++||+...+   ++. .+         + 
T Consensus       134 ~~-g~-~P~l~~~~~---~--g~v~e~l~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~---~~~-~~---------~-  192 (429)
T 1nw1_A          134 ER-HL-GPKLYGIFS---G--GRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVP---IWK-EP---------D-  192 (429)
T ss_dssp             HT-TS-SSCEEEEET---T--EEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCS---SCC-SS---------C-
T ss_pred             hC-CC-CCcEEEEeC---C--CEEEEEeCCcccChhhcCCHHHHHHHHHHHHHHhCCccc---cCC-Cc---------c-
Confidence            86 45 799997653   2  4999999997653       2368999999999997652   210 00         0 


Q ss_pred             CCccHHHHHHHhhhHHHHHHHHhhcCC-------------hHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeec
Q 020393          173 WTSNWIEFYAEHRLGYQLKLALDQYGD-------------STIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD  239 (326)
Q Consensus       173 ~~~~w~~~~~~~~l~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~  239 (326)
                      |  .|.      .+..+++........             ......+.+.++.+.+.+.....+.++||||++++|||++
T Consensus       193 ~--~~~------~i~~w~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~v~~H~Dl~~gNiL~~  264 (429)
T 1nw1_A          193 Y--LCE------ALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLP  264 (429)
T ss_dssp             H--HHH------HHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEE
T ss_pred             h--HHH------HHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHhccccCCCeEEEeCCCCCCeEEee
Confidence            0  111      111122111111000             0001223333333333333224678999999999999998


Q ss_pred             CC----------------------------CCeEEEcc-ccccCchhhhhhhhh---hc---------------CC-C--
Q 020393          240 KN----------------------------GEPVILDP-ACYYGHNEAEFGMSW---CA---------------GF-G--  269 (326)
Q Consensus       240 ~~----------------------------~~~~iID~-~~~~G~~~~Dla~~~---~~---------------~~-~--  269 (326)
                      ++                            +..+|||| .+.+|+|++|||...   +.               .+ +  
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~g~p~~DLA~~~~e~~~~~~~~~~p~~~~~~~~~p~~~  344 (429)
T 1nw1_A          265 KASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPEND  344 (429)
T ss_dssp             C------------------------------CCEECCCTTCEEEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHH
T ss_pred             CCccccccccccccccccccccccccccCCCeEEEEecccCCcCccHHHHHHHHHHHhcccCCccCCCcccCcccCcCHH
Confidence            75                            56899997 699999999999652   10               01 1  


Q ss_pred             --hHhHHHhhhhCC
Q 020393          270 --GSFYNSYFEVMP  281 (326)
Q Consensus       270 --~~fl~~Y~~~~~  281 (326)
                        ..|+++|.+..+
T Consensus       345 ~~~~fl~~Y~~~~~  358 (429)
T 1nw1_A          345 QMLEFFLNYLREQG  358 (429)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhcC
Confidence              479999988765

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=99.86  E-value=6.3e-21  Score=177.24  Aligned_cols=208  Identities=12%  Similarity=0.050  Sum_probs=131.2

Q ss_pred             cCCCchhHHHHHHhc-----CCCcceeeEeEeCCccccceEEEEeCC----------ccEEEEecCCCCcc--hHHHHHH
Q 020393           31 ATLSDDPIREWILSE-----GKATHITKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPS--MFEGEAL   93 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~-----~~~~~v~~v~~l~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~--~~~~E~~   93 (326)
                      ..++.+.+.+++...     +...+..+++++++|.+|.+|+|++++          ++||+|+++.....  ....|.+
T Consensus        10 ~~~~~~~~~~l~~~~~~~w~~~~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~   89 (369)
T 3c5i_A           10 DLTDPLYIKKICLEKVPEWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFE   89 (369)
T ss_dssp             -CCCHHHHHHHHHHHCGGGTTCCGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHH
T ss_pred             ccCCHHHHHHHHHHHCCCCCCCCcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHH
Confidence            345677788888776     333345789999999999999999865          58999999764222  2468999


Q ss_pred             HHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccc
Q 020393           94 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGS  166 (326)
Q Consensus        94 ~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~  166 (326)
                      +++.|++. ++ +|+++....     .++||+|++|.++.       ....++|+.|++||+...+. .++  ..  ...
T Consensus        90 ~l~~L~~~-g~-~P~~~~~~~-----~~~v~e~i~G~~l~~~~~~~~~~~~~~a~~La~lH~~~~~~-~~~--~~--~~~  157 (369)
T 3c5i_A           90 VYKTMSKY-KI-APQLLNTFN-----GGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKR-HLP--EH--WDR  157 (369)
T ss_dssp             HHHHHHHT-TS-SCCEEEEET-----TEEEEECCCSEECCGGGGGCHHHHHHHHHHHHHHHTHHHHS-CCC--TT--SCC
T ss_pred             HHHHHHhc-CC-CCceEEecC-----CcEEEEEecCCcCChhhcCChHHHHHHHHHHHHHHcCcccc-cCc--cc--CCC
Confidence            99999987 56 999997652     48999999997652       34689999999999976421 010  00  000


Q ss_pred             cccCCCCCccHHHHHHHhhhHHHHHHHHhhc------CC-hHHHHHHHHHHHHhccc--ccCCCCCcceeecCCCCCCee
Q 020393          167 TPQINKWTSNWIEFYAEHRLGYQLKLALDQY------GD-STIYQRGHRLMKNLAPL--FEGVNVEPCLLHGDLWSGNIS  237 (326)
Q Consensus       167 ~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~------~~-~~~~~~~~~l~~~~~~~--l~~~~~~~~LiHgDl~~~NiL  237 (326)
                      .|          .++  .++..+.+......      .+ ..+.+.++++.+.+...  +.....+.++||||++++|||
T Consensus       158 ~p----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~HgDl~~~Nil  225 (369)
T 3c5i_A          158 TP----------CIF--KMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNII  225 (369)
T ss_dssp             SC----------HHH--HHHHHHHHHHTTCSSGGGC-CCHHHHHHHHHHHHHHHHHHTTSSCGGGCEEEECSCCCGGGEE
T ss_pred             CC----------cHH--HHHHHHHHHHhhhhhHHHHHhhHHHHHHHHHHHHHHHHHhhhhcccCCCeEEEeCCCCcccEE
Confidence            00          011  01222222211100      00 11223333444333321  111135789999999999999


Q ss_pred             ecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          238 SDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       238 ~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      +++++ .+|||| .+.+|+|++||+.+
T Consensus       226 ~~~~~-~~lID~e~a~~g~~~~Dla~~  251 (369)
T 3c5i_A          226 NTNKC-LRLIDFEYSGFNFLATDIANF  251 (369)
T ss_dssp             ECC-C-EEECCCTTCEEEEHHHHHHHH
T ss_pred             ecCCc-EEEEEecCCCCCchHHHHHHH
Confidence            97665 899997 68999999999965

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=99.85  E-value=3.6e-20  Score=174.48  Aligned_cols=209  Identities=13%  Similarity=-0.008  Sum_probs=136.7

Q ss_pred             cCCCchhHHHHHHhcCCCc-----ceeeEeEeCCccccceEEEEeC---------CccEEEEecCCCCc--chHHHHHHH
Q 020393           31 ATLSDDPIREWILSEGKAT-----HITKICPVGGGCINLASRYGTD---------AGSFFVKTNRSIGP--SMFEGEALG   94 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~~~~~-----~v~~v~~l~~G~~n~~y~v~~~---------~~~~vlK~~~~~~~--~~~~~E~~~   94 (326)
                      +.++.+.+.+++....++.     ...++++++||.+|.+|+|+++         +++||+|+++....  -..+.|..+
T Consensus        47 ~~~d~~~l~~l~~~~~p~w~~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~  126 (424)
T 3mes_A           47 TITDTEIIIGICRKNIPGWKEINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDV  126 (424)
T ss_dssp             ---CHHHHHHHHHHHSTTCTTCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHcCccccCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHH
Confidence            4568889999999875543     4689999999999999999987         46899999875322  224689999


Q ss_pred             HHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCccccc
Q 020393           95 LGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGST  167 (326)
Q Consensus        95 l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~  167 (326)
                      ++.|++. ++ +|+++...     ..+.||+|++|..+.       ....++++.|++||+......++  +..  .+..
T Consensus       127 l~~L~~~-gi-~P~l~~~~-----~~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L--~~~--~~~~  195 (424)
T 3mes_A          127 FRYLSNI-NI-APNIIADF-----PEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADF--PSR--FDKE  195 (424)
T ss_dssp             HHHHHHT-TS-SCCEEEEE-----TTEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTS--CTT--SCCS
T ss_pred             HHHHHhc-CC-CCCEEEEc-----CCCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccC--ccc--cCCC
Confidence            9999986 56 89999754     348999999998753       24689999999999987621111  110  0001


Q ss_pred             ccCCCCCccHHHHHHHhhhHHHHHHHHhhc--CC--------hHHHHHHHHHHHHhcccc------------cCCCCCcc
Q 020393          168 PQINKWTSNWIEFYAEHRLGYQLKLALDQY--GD--------STIYQRGHRLMKNLAPLF------------EGVNVEPC  225 (326)
Q Consensus       168 ~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~--~~--------~~~~~~~~~l~~~~~~~l------------~~~~~~~~  225 (326)
                      |  +    .|.      ++..+++...+..  ..        +.+.+.++.+.+.++...            .....+.+
T Consensus       196 p--~----~~~------~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~  263 (424)
T 3mes_A          196 P--I----LFK------RIYLWREEAKIQVSKNNFQIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLV  263 (424)
T ss_dssp             C--C----HHH------HHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEE
T ss_pred             C--c----HHH------HHHHHHHHHHHhhcccchhhccccHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCce
Confidence            1  0    111      1111221111100  00        112333444433333110            01135789


Q ss_pred             eeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          226 LLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       226 LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      +||||++++||| ++++..+|||| .+.+|+|.+|||..
T Consensus       264 ~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~~~~Dla~~  301 (424)
T 3mes_A          264 FAHNDLQENNLL-QTQNNIRMIDYEYSAINFAGADIANY  301 (424)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEEEEHHHHHHHH
T ss_pred             EECCCCCcccee-cCCCcEEEEecccCCcCChHHHHHHH
Confidence            999999999999 66677899997 68999999999965

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=99.84  E-value=3.7e-20  Score=176.38  Aligned_cols=211  Identities=16%  Similarity=0.140  Sum_probs=129.9

Q ss_pred             ceeeEeEeCCccccceEEEEeCC--ccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           50 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +..+++++++|.+|.+|+|++++  ++||+|++.......  .+.|..+++.|++. ++ +|+++..+.   +  ..||+
T Consensus       109 ~~~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~-gl-~P~ll~~~~---~--G~v~e  181 (458)
T 2qg7_A          109 DSLEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNK-NI-AKKIYVFFT---N--GRIEE  181 (458)
T ss_dssp             TTEEEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTS-SS-BCCEEEEET---T--EEEEE
T ss_pred             cCeEEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhc-CC-CCCEEEEeC---C--eEEEE
Confidence            45789999999999999999987  689999996533222  26899999999986 44 799998763   2  35999


Q ss_pred             eecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCC----CcccccccCCCCCccHHHHHHHhhhHHHHHHHH
Q 020393          126 FIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVD----NTIGSTPQINKWTSNWIEFYAEHRLGYQLKLAL  194 (326)
Q Consensus       126 ~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~----~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~  194 (326)
                      |++|..+.       ....++|+.|++||+.....  +++...    +..+ .+..+    .|.      ++..+++...
T Consensus       182 ~I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~--~~~~~l~~~~~~~~-~~~~~----~~~------~i~~w~~~~~  248 (458)
T 2qg7_A          182 FMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNE--NLYKELQVTQKVPG-TRPSF----LWN------TIWKYFHLLN  248 (458)
T ss_dssp             CCCSEECCTTTTTSHHHHHHHHHHHHHHHTCCCCH--HHHHHHHHHHTCCS-SSCCS----HHH------HHHHHHHHHH
T ss_pred             eeCCccCChhhcCCHHHHHHHHHHHHHHhcCCccc--cchhcccccccccC-CCCcc----HHH------HHHHHHHHHH
Confidence            99997653       23688999999999977531  110000    0000 00011    121      0111111111


Q ss_pred             hh---cC----ChH-----HHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeec-----------------------
Q 020393          195 DQ---YG----DST-----IYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD-----------------------  239 (326)
Q Consensus       195 ~~---~~----~~~-----~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~-----------------------  239 (326)
                      +.   ..    ...     ....+.+.++.+...+.....+.++||||++++|||++                       
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~~v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~  328 (458)
T 2qg7_A          249 EERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGE  328 (458)
T ss_dssp             HHHHSCCCTTSTTHHHHHBCHHHHHHHHHHHHHHHHTTTCCEEEECSCCCGGGEEECCC---------------------
T ss_pred             HhccccccccchhhhcccCCHHHHHHHHHHHHHHhhhccCCeeEEecCCCCCcEEeeccccccccccccccccccccccc
Confidence            00   00    000     01122223333333332224678999999999999998                       


Q ss_pred             --------------CCCCeEEEcc-ccccCchhhhhhhhhh--cCC--------C----hHhHHHhhhhC
Q 020393          240 --------------KNGEPVILDP-ACYYGHNEAEFGMSWC--AGF--------G----GSFYNSYFEVM  280 (326)
Q Consensus       240 --------------~~~~~~iID~-~~~~G~~~~Dla~~~~--~~~--------~----~~fl~~Y~~~~  280 (326)
                                    +++..+|||| .|.+|+|++|||.+.+  .++        .    ..|+++|.+..
T Consensus       329 ~~~~~~~~~~~~~~~~~~l~lIDfEya~~gdp~~DLA~~~~ew~~~~~d~~~~P~~~~~~~fl~~Y~~~~  398 (458)
T 2qg7_A          329 GGETGEGGETGEGGEGDSISFIDFEYSCPMERAYDIANHFNEYAGFNCDWDLTPSKEEEYHFIMHYLGTD  398 (458)
T ss_dssp             --------------CCCCEEECCCTTCEEEEHHHHHHHHHHGGGTTTTCGGGSCCHHHHHHHHHHHHTCC
T ss_pred             ccccccccccccCCCCCeEEEEeecCCCCCCcHHHHHHHHHHhcccccccccCCCHHHHHHHHHHHhccC
Confidence                          3456899997 6999999999996521  112        2    47999998765

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=99.82  E-value=6.3e-19  Score=163.88  Aligned_cols=181  Identities=19%  Similarity=0.230  Sum_probs=119.6

Q ss_pred             ceeeEeEeCCccccceEEEEeCC---------ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..++++++||.+|.+|+|++++         ++||+|++...  ....+..|.++++.|++. ++ +|+++....   +
T Consensus        51 ~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~-gv-~P~ll~~~~---~  125 (379)
T 3feg_A           51 EELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAER-SL-GPQLYGVFP---E  125 (379)
T ss_dssp             GGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHT-TS-SCCEEEEET---T
T ss_pred             CceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhc-CC-CCeEEEEcC---C
Confidence            45689999999999999999853         58999998652  234456899999999986 56 599998764   2


Q ss_pred             ceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHH
Q 020393          119 GSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLK  191 (326)
Q Consensus       119 ~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~  191 (326)
                        .+||+|++|..+.       ....++++.|++||+...+   ++.+               ..|   + ..++..+++
T Consensus       126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~---~~~~---------------~~~---l-~~~i~~w~~  181 (379)
T 3feg_A          126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMP---FTKE---------------PHW---L-FGTMERYLK  181 (379)
T ss_dssp             --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS---SCCS---------------CCH---H-HHHHHHHHH
T ss_pred             --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC---CCCC---------------ccc---H-HHHHHHHHH
Confidence              3999999998764       2368899999999998753   3210               011   0 012333333


Q ss_pred             HHHhhcCC-----h-----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCC----CCeEEEcc-ccccCch
Q 020393          192 LALDQYGD-----S-----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKN----GEPVILDP-ACYYGHN  256 (326)
Q Consensus       192 ~~~~~~~~-----~-----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~----~~~~iID~-~~~~G~~  256 (326)
                      ...+...+     .     .+.+.++.+.+.+    .....+.++||||++++|||++++    +..+|||| .+.+|+|
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L----~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~  257 (379)
T 3feg_A          182 QIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLL----ESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYR  257 (379)
T ss_dssp             HHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHH----HTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEH
T ss_pred             HHHhccCcccchhhhhhhHHHHHHHHHHHHHH----hhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCCh
Confidence            33222110     0     1233344443333    222467899999999999999876    56899997 6899999


Q ss_pred             hhhhhhh
Q 020393          257 EAEFGMS  263 (326)
Q Consensus       257 ~~Dla~~  263 (326)
                      .+|||..
T Consensus       258 ~~Dla~~  264 (379)
T 3feg_A          258 GFDIGNH  264 (379)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999965

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=99.82  E-value=3.1e-19  Score=167.32  Aligned_cols=220  Identities=16%  Similarity=0.200  Sum_probs=134.7

Q ss_pred             ccccCCCchhHHHHHHhcCC--CcceeeEeEeCCccccceEEEEe--CCccEEEEecCCC----------CcchHHHHHH
Q 020393           28 RTFATLSDDPIREWILSEGK--ATHITKICPVGGGCINLASRYGT--DAGSFFVKTNRSI----------GPSMFEGEAL   93 (326)
Q Consensus        28 ~~~~~~~~~~i~~~l~~~~~--~~~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~~----------~~~~~~~E~~   93 (326)
                      ++|+.++.+.+.+||.+.+.  +....+++++++|..|.+|+++.  +++++|+|..++.          ....+..|.+
T Consensus         7 ~~~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~   86 (397)
T 2olc_A            7 PLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESS   86 (397)
T ss_dssp             CCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHH
T ss_pred             cccccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHH
Confidence            45888999999999996542  22347899999999999999964  3458999986531          1234578999


Q ss_pred             HHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 020393           94 GLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVDN  162 (326)
Q Consensus        94 ~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~~~~~  162 (326)
                      +++.+++..+.++|+++..+.   +..++|||+++|...           ...++++|+.||++|....+   ++.+...
T Consensus        87 ~L~~l~~~~~~~vP~~~~~d~---~~~~lvmE~l~g~~~~~~~l~~~~~~~~~~~~l~~~La~lH~~~~~---~~~~~~~  160 (397)
T 2olc_A           87 ALIRQGEHVPHLVPRVFYSDT---EMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSD---YALEPKV  160 (397)
T ss_dssp             HHHHHHTTCGGGSCCEEEEET---TTTEEEECCCTTSEEHHHHHHTTCCCTTHHHHHHHHHHHHHHHTST---TTSCHHH
T ss_pred             HHHHhhhhCCCCcCeEEEEcC---CccEEEEEeCCCcchHHHHHhcCCcCHHHHHHHHHHHHHHhhhccc---ccCChHH
Confidence            999998765678999998763   467999999988421           24478999999999965432   2111000


Q ss_pred             c---cccc--ccC------CCCCccHHHHH---HHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceee
Q 020393          163 T---IGST--PQI------NKWTSNWIEFY---AEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLH  228 (326)
Q Consensus       163 ~---~~~~--~~~------~~~~~~w~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiH  228 (326)
                      .   ....  +..      ..+...|....   ....+........   ....+...+.++.+.+    .  ..+++|||
T Consensus       161 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~l~---~~~~l~~~~~~l~~~~----~--~~~~~L~H  231 (397)
T 2olc_A          161 KKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLW---NNDSVKIEAAKLKKSF----L--TSAETLIH  231 (397)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHH---TCHHHHHHHHHHHHHH----H--HBCCEEEC
T ss_pred             HHHHHHhcCCHHHHHHHHHHhcccchhhhccccCCHhHHHHHHHhc---cCHHHHHHHHHHHHHh----c--cCCCceee
Confidence            0   0000  000      00000000000   0000111111000   1112222333332221    1  13679999


Q ss_pred             cCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          229 GDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       229 gDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      ||+|++|||+++++ ++|||| .+.+|+|.+||+++
T Consensus       232 GDl~~~Nil~~~~~-~~lID~e~a~~G~p~~DLa~~  266 (397)
T 2olc_A          232 GDLHTGSIFASEHE-TKVIDPEFAFYGPIGFDVGQF  266 (397)
T ss_dssp             SCCSGGGEEECSSC-EEECCCTTCEEECTHHHHHHH
T ss_pred             CCCCcCcEEEeCCC-eEEEeCcccccCChHHhHHHH
Confidence            99999999997764 899997 68999999999975

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=99.63  E-value=2.3e-15  Score=141.37  Aligned_cols=192  Identities=14%  Similarity=0.116  Sum_probs=113.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc---------cEEEEecCCCCcc---------------------hHHHHHHHHHHHH
Q 020393           50 HITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSIGPS---------------------MFEGEALGLGAMY   99 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~---------~~vlK~~~~~~~~---------------------~~~~E~~~l~~L~   99 (326)
                      +-.+|++++||.+|.+|+|+++++         ++++|+++.....                     ....|..+...+.
T Consensus        53 ~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~ls  132 (401)
T 3g15_A           53 DEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILA  132 (401)
T ss_dssp             GGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHHHHhccCCCCCcchhHHHHHHH
Confidence            446899999999999999997542         6999998642110                     0113555666666


Q ss_pred             hcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393          100 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  172 (326)
Q Consensus       100 ~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~  172 (326)
                      .. + ..|+++....     ...+++|++|..++       ....++++.|++||+...+   ++........       
T Consensus       133 ~~-g-~~p~l~~~f~-----~g~i~e~i~g~~l~~~~~~~~~~~~~ia~~La~lH~~~~~---~~~~~~~~~~-------  195 (401)
T 3g15_A          133 ER-S-LGPKLYGIFP-----QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMP---FNKEPKWLFG-------  195 (401)
T ss_dssp             HT-T-SSCCEEEEET-----TEEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCS---SCCSCCHHHH-------
T ss_pred             hC-C-CCCEEEEEEC-----CcEEEEecCCCcCChhhhcCHHHHHHHHHHHHHHhccccc---cccccchHHH-------
Confidence            65 2 3788887653     36889999998763       2357899999999998763   2211000000       


Q ss_pred             CCccHHHHHHHh--hhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecC------CCCe
Q 020393          173 WTSNWIEFYAEH--RLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK------NGEP  244 (326)
Q Consensus       173 ~~~~w~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~------~~~~  244 (326)
                      ....|...+...  ......+..... ....+...++.+.+    .+.....+.++||||++++|||+.+      ++..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~----~l~~~~~~~vfcHnDl~~gNil~~~~~~~~~~~~l  270 (401)
T 3g15_A          196 TMEKYLKEVLRIKFTEESRIKKLHKL-LSYNLPLELENLRS----LLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKL  270 (401)
T ss_dssp             HHHHHHHHHHHCCCCSHHHHHHHHHH-HTTCHHHHHHHHHH----HHHTSCCCEEEECSCCCGGGEEEETTGGGCSSCCE
T ss_pred             HHHHHHHHHHhhccccHHHHHHHHHh-hhHHHHHHHHHHHH----hhhccCCCeeeEEecCCCCeEEEecCcccCcCCeE
Confidence            001111111100  000001111000 01111222333322    3332246779999999999999943      3457


Q ss_pred             EEEcc-ccccCchhhhhhhh
Q 020393          245 VILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       245 ~iID~-~~~~G~~~~Dla~~  263 (326)
                      .+||| .+.+|+|.+|||..
T Consensus       271 ~vIDwEya~~n~~~fDlan~  290 (401)
T 3g15_A          271 MLIDFEYSSYNYRGFDIGNH  290 (401)
T ss_dssp             EECCCTTCEEEEHHHHHHHH
T ss_pred             EEechHhccCCCchHhHHHH
Confidence            89997 69999999999964

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.87  E-value=7e-09  Score=96.06  Aligned_cols=72  Identities=18%  Similarity=0.174  Sum_probs=53.5

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCC---------Ccc----------------hHHHHHHHHHHHHhcCCCCCcc
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSI---------GPS----------------MFEGEALGLGAMYETRTIRAPR  108 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~---------~~~----------------~~~~E~~~l~~L~~~~~~~vP~  108 (326)
                      ..++.|..+.||+....+| .+.+|+.+..         .+.                ....|+..|..|... ++++|+
T Consensus       101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~-gv~vp~  179 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE-GFPVPE  179 (397)
T ss_dssp             EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT-TCSCCC
T ss_pred             CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc-CCCCCe
Confidence            4678889999999988766 6888986531         000                013578888888775 799999


Q ss_pred             eeeecccCCCceEEEEeeecCCCC
Q 020393          109 PFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       109 ~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      |+...     ..++|||+++|.++
T Consensus       180 p~~~~-----~~~LVME~i~G~~L  198 (397)
T 4gyi_A          180 PIAQS-----RHTIVMSLVDALPM  198 (397)
T ss_dssp             EEEEE-----TTEEEEECCSCEEG
T ss_pred             eeecc-----CceEEEEecCCccH
Confidence            99765     45899999998654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.61  E-value=4.4e-07  Score=79.48  Aligned_cols=68  Identities=22%  Similarity=0.177  Sum_probs=51.7

Q ss_pred             eEeCCccccceEEEEe-CCc-c--EEEEecCCCC---c------------------------chHHHHHHHHHHHHhcCC
Q 020393           55 CPVGGGCINLASRYGT-DAG-S--FFVKTNRSIG---P------------------------SMFEGEALGLGAMYETRT  103 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~-~~~-~--~vlK~~~~~~---~------------------------~~~~~E~~~l~~L~~~~~  103 (326)
                      ..++.|..+.||+... .+| .  +++|+.+...   .                        ..+..|...+..|... +
T Consensus        53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~  131 (258)
T 1zth_A           53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA-G  131 (258)
T ss_dssp             EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC-C
Confidence            5688899999999987 444 6  8999864320   0                        1467899999999875 5


Q ss_pred             CCCcceeeecccCCCceEEEEeeec
Q 020393          104 IRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus       104 ~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +++|.++..+     ..++||||+.
T Consensus       132 i~~p~~~~~~-----~~~lVmE~~g  151 (258)
T 1zth_A          132 VSVPQPYTYM-----KNVLLMEFIG  151 (258)
T ss_dssp             CCCCCEEEEE-----TTEEEEECCE
T ss_pred             CCCCeEEEcC-----CCEEEEEecC
Confidence            8999999754     5699999994

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.58  E-value=1.7e-07  Score=85.72  Aligned_cols=77  Identities=18%  Similarity=0.189  Sum_probs=48.9

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.+|.|.+..||+.... ++ .|.+|.-...     ....+..|+.+++.|..   -.+.+++..... ++..|+||
T Consensus        27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIV~~~~~~~~-~~~~yiVm  102 (350)
T 4b9d_A           27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH---PNIVQYRESFEE-NGSLYIVM  102 (350)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCC---CCCCcEEEEEEE-CCEEEEEE
Confidence            34677999999999999763 34 6888976432     13456789988888853   235556655443 57899999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|+++
T Consensus       103 Ey~~gg~L  110 (350)
T 4b9d_A          103 DYCEGGDL  110 (350)
T ss_dssp             ECCTTCBH
T ss_pred             eCCCCCcH
Confidence            99999765

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.57  E-value=3.1e-07  Score=81.65  Aligned_cols=70  Identities=16%  Similarity=0.130  Sum_probs=53.0

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCCC---------------------cchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG---------------------PSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---------------------~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      +.++.|..+.||++...++ .+++|..+...                     ...+..|.++++.+. +  +++|.++..
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~--~~v~~~~~~  172 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G--LAVPKVYAW  172 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T--SSSCCEEEE
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C--CCcCeEEec
Confidence            6788899999999988545 79999985321                     123568999999888 3  788887644


Q ss_pred             cccCCCceEEEEeeecCCCC
Q 020393          113 GALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~~~  132 (326)
                           +..++||||++|.++
T Consensus       173 -----~~~~lvmE~~~g~~L  187 (282)
T 1zar_A          173 -----EGNAVLMELIDAKEL  187 (282)
T ss_dssp             -----ETTEEEEECCCCEEG
T ss_pred             -----cceEEEEEecCCCcH
Confidence                 356999999999766

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.50  E-value=6e-07  Score=84.16  Aligned_cols=78  Identities=14%  Similarity=0.186  Sum_probs=56.4

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -.-++.||.|.+..||+.... +| .|.+|.-..   .....+..|..+|+.|..   -.+-+++..... ++..|+|||
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H---pnIV~l~~~~~~-~~~~~iVmE  228 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---ENVVEMYNSYLV-GDELWVVME  228 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEEE
T ss_pred             cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCC---CCCCceEEEEEE-CCEEEEEEe
Confidence            456788999999999999864 34 677887642   234567889999988853   235556654433 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+.+
T Consensus       229 y~~gG~L  235 (423)
T 4fie_A          229 FLEGGAL  235 (423)
T ss_dssp             CCTTEEH
T ss_pred             CCCCCcH
Confidence            9999754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.50  E-value=3.7e-07  Score=83.39  Aligned_cols=95  Identities=14%  Similarity=0.166  Sum_probs=63.2

Q ss_pred             CchhHHHHHHhc-CCC---cceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCC
Q 020393           34 SDDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTI  104 (326)
Q Consensus        34 ~~~~i~~~l~~~-~~~---~~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~  104 (326)
                      +.+++..-+... .++   ..-.-++.+|.|.+..||+.... +| .|.+|.-..   .....+..|..+++.|..   -
T Consensus        55 ~~~~~~~~~~~~~~~~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H---p  131 (346)
T 4fih_A           55 SHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH---E  131 (346)
T ss_dssp             HHHHHHHHHHHHSCSSCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCC---T
T ss_pred             chhhhhhhhcccCCCCChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCC---C
Confidence            345555444433 222   23456788999999999999864 34 677887532   234567889999988853   2


Q ss_pred             CCcceeeecccCCCceEEEEeeecCCCC
Q 020393          105 RAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       105 ~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .+-+++..... ++..|+||||++|+.+
T Consensus       132 nIV~l~~~~~~-~~~~~ivmEy~~gg~L  158 (346)
T 4fih_A          132 NVVEMYNSYLV-GDELWVVMEFLEGGAL  158 (346)
T ss_dssp             TBCCEEEEEEE-TTEEEEEECCCTTEEH
T ss_pred             CCCcEEEEEEE-CCEEEEEEeCCCCCcH
Confidence            35556655433 5789999999999754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.47  E-value=9.7e-07  Score=79.24  Aligned_cols=140  Identities=18%  Similarity=0.098  Sum_probs=78.7

Q ss_pred             eEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHH--HHHhcCCCCCcceeeecccCC---CceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLG--AMYETRTIRAPRPFKVGALPT---GGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~--~L~~~~~~~vP~~~~~~~~~~---~~~~~v~e~l~G  129 (326)
                      +.+|.|.+..||+.+..+..+.+|.-..........|.++..  .|. +  -.+-+++.......   ...|+||||++|
T Consensus         9 ~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~-H--pNIv~l~g~~~~~~~~~~~~~lV~Ey~~~   85 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR-H--ENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             EEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCC-C--TTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             EEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCC-C--CCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence            568999999999998876688899876433222333443322  111 1  12334444432211   246999999998


Q ss_pred             CCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHHHH
Q 020393          130 GSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRL  209 (326)
Q Consensus       130 ~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  209 (326)
                      +++.          ..||....                        +|....   ++.               .+.+..+
T Consensus        86 gsL~----------~~l~~~~l------------------------~~~~~~---~i~---------------~~ia~gl  113 (303)
T 3hmm_A           86 GSLF----------DYLNRYTV------------------------TVEGMI---KLA---------------LSTASGL  113 (303)
T ss_dssp             CBHH----------HHHHHCCB------------------------CHHHHH---HHH---------------HHHHHHH
T ss_pred             CcHH----------HHHHhCCC------------------------CHHHHH---HHH---------------HHHHHHH
Confidence            7652          12333221                        122111   011               0111222


Q ss_pred             HHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          210 MKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       210 ~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ...+...... ...+.+||+|++|.|||++.++..-|.||.
T Consensus       114 ~ylH~~~~~~-~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG  153 (303)
T 3hmm_A          114 AHLHMEIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             HHHHCCBCST-TCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             HHHHHhhhhc-cCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence            2112221111 246799999999999999998888899974

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.44  E-value=3.8e-07  Score=82.09  Aligned_cols=75  Identities=8%  Similarity=-0.054  Sum_probs=52.5

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.+|.|....||++... ++ .|.+|+-..      .....+..|.++++.|..   -.+.+++....+ ++..|+|||
T Consensus        37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~yivmE  112 (311)
T 4aw0_A           37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH---PFFVKLYFTFQD-DEKLYFGLS  112 (311)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEEe
Confidence            456899999999999863 33 688897642      223456789888877642   235555555443 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus       113 y~~gG~L  119 (311)
T 4aw0_A          113 YAKNGEL  119 (311)
T ss_dssp             CCTTEEH
T ss_pred             cCCCCCH
Confidence            9999765

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.41  E-value=3.1e-07  Score=89.74  Aligned_cols=43  Identities=16%  Similarity=0.086  Sum_probs=34.8

Q ss_pred             hHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           87 MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        87 ~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      .+..|+++|+.+..+  ..+|+++.++.+ ++..|+||||++|+++
T Consensus       287 ~~~~E~~~l~~~~~~--~~i~~~~~~~ed-~~~~yLVMEyv~G~~L  329 (569)
T 4azs_A          287 ELHNEIKFLTQPPAG--FDAPAVLAHGEN-AQSGWLVMEKLPGRLL  329 (569)
T ss_dssp             HHHHHHHHHHSCCTT--CCCCCEEEEEEC-SSEEEEEEECCCSEEH
T ss_pred             HHHHHHHHHHhcCCC--CCeeEEEEEEEE-CCEEEEEEecCCCCcH
Confidence            367788888877543  579999998875 6799999999999865

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.38  E-value=1.8e-06  Score=76.37  Aligned_cols=72  Identities=13%  Similarity=0.072  Sum_probs=47.8

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.+|.|..+.||+.... ++ .|.+|+-...      ....+..|.++++.|..   -.+.+++..... ++..|+|||
T Consensus        18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE   93 (275)
T 3hyh_A           18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH---PHIIKLYDVIKS-KDEIIMVIE   93 (275)
T ss_dssp             EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEEEEEe
Confidence            467899999999999753 33 7888975421      23457789998888852   235566655443 568899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      |++|
T Consensus        94 y~~g   97 (275)
T 3hyh_A           94 YAGN   97 (275)
T ss_dssp             CCCE
T ss_pred             CCCC
Confidence            9965

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.33  E-value=1.8e-06  Score=78.01  Aligned_cols=81  Identities=15%  Similarity=0.011  Sum_probs=54.4

Q ss_pred             eeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCC---CceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---GGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---~~~~~v~e~l  127 (326)
                      ..-.+.++.|....||+....+..+++|+........+..|.+++..+.-. --.+.+++.......   ...+++||++
T Consensus        44 y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  122 (342)
T 1b6c_B           44 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQLWLVSDYH  122 (342)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCC-CTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred             EEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcC-CCcEEEEEeeecccCCccceeEEEEeec
Confidence            344567888999999999887668999998654444456677776654211 123555665543322   2789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus       123 ~~g~L  127 (342)
T 1b6c_B          123 EHGSL  127 (342)
T ss_dssp             TTCBH
T ss_pred             CCCcH
Confidence            98654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.31  E-value=3.7e-06  Score=77.29  Aligned_cols=76  Identities=13%  Similarity=0.101  Sum_probs=52.6

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .+.++.|....||+.... +| .+++|+.+...           ...+..|..+++.+..+  -.+++++..... .+..
T Consensus        99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~~~  175 (365)
T 2y7j_A           99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH--PHIITLIDSYES-SSFM  175 (365)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC--TTBCCEEEEEEB-SSEE
T ss_pred             ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC--CCEeEEEEEEee-CCEE
Confidence            467888899999999874 34 78999875421           23456788888888543  235555554332 4688


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++|||++|.++
T Consensus       176 ~lv~e~~~g~~L  187 (365)
T 2y7j_A          176 FLVFDLMRKGEL  187 (365)
T ss_dssp             EEEECCCTTCBH
T ss_pred             EEEEEeCCCCcH
Confidence            999999999754

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.30  E-value=4.2e-06  Score=76.69  Aligned_cols=78  Identities=13%  Similarity=0.163  Sum_probs=52.5

Q ss_pred             EeEeCCccccceEEEE------eC-CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYG------TD-AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~------~~-~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+.++.|....||+..      .. ...+++|.........+..|.+.++.|....--.+.+++..... .+..++||||
T Consensus        70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~~~~lv~e~  148 (365)
T 3e7e_A           70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QNGSVLVGEL  148 (365)
T ss_dssp             EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SSCEEEEECC
T ss_pred             EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CCCcEEEEec
Confidence            3457889999999993      22 33789999876555567778888877754211234444444332 5688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|+++
T Consensus       149 ~~~g~L  154 (365)
T 3e7e_A          149 YSYGTL  154 (365)
T ss_dssp             CCSCBH
T ss_pred             cCCCcH
Confidence            998765

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.29  E-value=1.4e-06  Score=79.22  Aligned_cols=76  Identities=22%  Similarity=0.141  Sum_probs=50.8

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ..-.+.+|.|.+..||+.... .| .|.+|.-....  ....|..+++.|..   -.+.+++..... ++..|+||||++
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~--~~~~E~~il~~l~H---pnIV~l~~~~~~-~~~~~ivmEy~~  133 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--FRVEELVACAGLSS---PRIVPLYGAVRE-GPWVNIFMELLE  133 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCTHHHHTTTTCCC---TTBCCEEEEEEE-TTEEEEEECCCT
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH--hHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEeccC
Confidence            344566999999999999863 34 68889875432  22467777665532   124455554433 568899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus       134 gg~L  137 (336)
T 4g3f_A          134 GGSL  137 (336)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            9765

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.28  E-value=4e-06  Score=75.37  Aligned_cols=77  Identities=14%  Similarity=0.084  Sum_probs=52.2

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      ++.=.+.+|.|.+..||+.+.. +.+.+|+-...  .   ...+..|+.+++.|..   -.+-+++....  ++..++||
T Consensus        37 ~l~l~~~iG~G~fG~Vy~~~~~-~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~H---pNIV~l~g~~~--~~~~~iVm  110 (307)
T 3omv_A           37 EVMLSTRIGSGSFGTVYKGKWH-GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH---VNILLFMGYMT--KDNLAIVT  110 (307)
T ss_dssp             SCCEEEECCCCSSSEEEEEESS-SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEEC-CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEE--CCeEEEEE
Confidence            3444677999999999998754 45777776431  1   2346778887776643   12445555432  46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|+++
T Consensus       111 Ey~~gGsL  118 (307)
T 3omv_A          111 QWCEGSSL  118 (307)
T ss_dssp             ECCSSCBH
T ss_pred             EcCCCCCH
Confidence            99999765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=98.28  E-value=5.4e-07  Score=80.95  Aligned_cols=77  Identities=14%  Similarity=0.041  Sum_probs=45.5

Q ss_pred             eeEeEeCCccccceEEEEeC----Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           52 TKICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      .=++.+|.|....||++...    .+ .|.+|+-...     ....+..|.++++.|..   -.+.+++..... ++..|
T Consensus        27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~~  102 (304)
T 3ubd_A           27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH---PFIVKLHYAFQT-EGKLY  102 (304)
T ss_dssp             EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCC---TTEECEEEEEEE-TTEEE
T ss_pred             EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCC---CCCCeEEEEEEE-CCEEE
Confidence            34567899999999998642    22 5788876431     12345567766654431   124444444333 57899


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +||||++|+++
T Consensus       103 ivmEy~~gg~L  113 (304)
T 3ubd_A          103 LILDFLRGGDL  113 (304)
T ss_dssp             EEECCCTTCEE
T ss_pred             EEEEcCCCCCH
Confidence            99999999866

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.26  E-value=2.5e-06  Score=75.64  Aligned_cols=82  Identities=17%  Similarity=0.043  Sum_probs=53.5

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~e~  126 (326)
                      +..-.+.++.|....||+...++..+++|+...........|.+++..+.-. .-.+.+++.....  . .+..+++||+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~   87 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR-HENILGFIASDMTSRHSSTQLWLITHY   87 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             cEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhcc-CcCeeeEEEeeccccCCCceeEEehhh
Confidence            4556678899999999999887678999998654334455676666553211 1234555543221  1 2467999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        88 ~~~g~L   93 (301)
T 3q4u_A           88 HEMGSL   93 (301)
T ss_dssp             CTTCBH
T ss_pred             ccCCCH
Confidence            998654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.24  E-value=3.9e-06  Score=76.19  Aligned_cols=78  Identities=18%  Similarity=0.138  Sum_probs=53.5

Q ss_pred             eeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           51 ITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ++=.+.+|.|.+..||+.+..      ++ .+.+|.-....   ...+..|++++..|..   -.+-+++..... .+..
T Consensus        43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H---pnIV~l~g~~~~-~~~~  118 (329)
T 4aoj_A           43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH---QHIVRFFGVCTE-GRPL  118 (329)
T ss_dssp             EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSSE
T ss_pred             eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEE
Confidence            444567899999999998753      23 57788765432   3446788888777742   235556665433 4678


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      ++||||++|+++
T Consensus       119 ~lV~Ey~~~G~L  130 (329)
T 4aoj_A          119 LMVFEYMRHGDL  130 (329)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEEcCCCCcH
Confidence            999999999876

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.24  E-value=6.4e-06  Score=73.82  Aligned_cols=79  Identities=14%  Similarity=0.058  Sum_probs=56.2

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +..-.+.++.|..+.||+....+..+++|+.....     ...+..|..+++.+..   -.+++++..... .+..+++|
T Consensus        38 ~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~  113 (309)
T 3p86_A           38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH---PNIVLFMGAVTQ-PPNLSIVT  113 (309)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-TTCCEEEE
T ss_pred             HceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCceEEEE
Confidence            44556778999999999998877789999876432     1235678888777742   245666655433 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus       114 e~~~~~~L  121 (309)
T 3p86_A          114 EYLSRGSL  121 (309)
T ss_dssp             ECCTTCBH
T ss_pred             ecCCCCcH
Confidence            99998754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.23  E-value=1.4e-06  Score=78.16  Aligned_cols=79  Identities=16%  Similarity=0.111  Sum_probs=51.7

Q ss_pred             ceeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      .++=.+.+|.|.+..||+.+..      ++ .+.+|.-....   ...+..|+++++.|..   -.+-+++..... .+.
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H---pnIV~l~g~~~~-~~~   89 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH---EHIVKFYGVCVE-GDP   89 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSS
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCC---CCCccEEEEEee-CCE
Confidence            3444567999999999998752      23 46778765432   3446788888776642   235556655443 468


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++||||++|+++
T Consensus        90 ~~lV~Ey~~~G~L  102 (299)
T 4asz_A           90 LIMVFEYMKHGDL  102 (299)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEEcCCCCcH
Confidence            8999999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.22  E-value=8.4e-06  Score=74.98  Aligned_cols=76  Identities=13%  Similarity=-0.035  Sum_probs=50.5

Q ss_pred             EeEeCCccccceEEEEeC----Cc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD----AG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.+|.|..+.||+.+..    .+ .+.+|.-.. .....+..|.++|+.+..+  -.+.+++..... .+..|+||||+
T Consensus        26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h--~nIv~l~~~~~~-~~~~~lvmE~~  102 (361)
T 4f9c_A           26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQ--DNVMGVKYCFRK-NDHVVIAMPYL  102 (361)
T ss_dssp             EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSB--TTBCCCSEEEEE-TTEEEEEEECC
T ss_pred             EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCC--CCCceEEEEEEE-CCEEEEEEeCC
Confidence            467899999999998642    22 577886543 2334466788888777543  124444443332 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus       103 ~g~~L  107 (361)
T 4f9c_A          103 EHESF  107 (361)
T ss_dssp             CCCCH
T ss_pred             CcccH
Confidence            98654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.22  E-value=7e-06  Score=72.11  Aligned_cols=79  Identities=15%  Similarity=0.124  Sum_probs=54.5

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-++.++.|..+.||+....++ .+++|.....  ....+..|.+++..+..   -.+++++..... .+..+++||+
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~  100 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH---EKLVQLYGVCTK-QRPIFIITEY  100 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSEEEEECC
T ss_pred             HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCC---CCEeeEEEEEec-CCCeEEEEec
Confidence            456678899999999999987665 7899988653  23456678877776642   246666665433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus       101 ~~~~~L  106 (283)
T 3gen_A          101 MANGCL  106 (283)
T ss_dssp             CTTCBH
T ss_pred             cCCCcH
Confidence            998654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.21  E-value=1.2e-05  Score=69.95  Aligned_cols=79  Identities=19%  Similarity=0.151  Sum_probs=57.6

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-++.++.|..+.||+....++ .+++|.....  ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   84 (268)
T 3sxs_A            9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH---PKLVKFYGVCSK-EYPIYIVTEY   84 (268)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSEEEEEEC
T ss_pred             heeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCceEEEEEc
Confidence            455677889999999999987766 6889987643  23456788888877753   346666665433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        85 ~~~~~L   90 (268)
T 3sxs_A           85 ISNGCL   90 (268)
T ss_dssp             CTTCBH
T ss_pred             cCCCcH
Confidence            998754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.20  E-value=1.4e-05  Score=70.52  Aligned_cols=79  Identities=10%  Similarity=0.078  Sum_probs=57.2

Q ss_pred             ceeeEeEeCCccccceEEEEe--CCccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGT--DAGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +-.-.+.++.|..+.+|+...  ++..+++|+... .....+..|...++.+..+  ..+|.++..... ....+++||+
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~   87 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQE-GLHNVLVIDL   87 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEE-TTEEEEEEEC
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcC--CCCCeEEeecCC-CceeEEEEEe
Confidence            445567788899999999985  334789997753 3345678899988888654  357888876543 5688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      + |.++
T Consensus        88 ~-~~~L   92 (298)
T 1csn_A           88 L-GPSL   92 (298)
T ss_dssp             C-CCBH
T ss_pred             c-CCCH
Confidence            9 6543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.19  E-value=7.7e-06  Score=71.36  Aligned_cols=79  Identities=19%  Similarity=0.133  Sum_probs=56.9

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-++.++.|..+.||+....++ .+++|.....  ....+..|.++++.+..   -.+++++..... .+..+++||+
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   86 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---PKLVQLYGVCLE-QAPICLVFEF   86 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSEEEEEEC
T ss_pred             hceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCceEEEEEe
Confidence            455567889999999999987544 7899987653  23456788888777752   245666665433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        87 ~~~~~L   92 (269)
T 4hcu_A           87 MEHGCL   92 (269)
T ss_dssp             CTTCBH
T ss_pred             CCCCcH
Confidence            998754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.19  E-value=5.3e-06  Score=74.55  Aligned_cols=77  Identities=14%  Similarity=0.090  Sum_probs=51.4

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-.+.++.|..+.||+....++ .+++|.....    ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus        33 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~  108 (326)
T 3uim_A           33 SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVH---RNLLRLRGFCMT-PTERLLVYPY  108 (326)
T ss_dssp             CSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCC---TTBCCCCEEECC-SSCCEEEEEC
T ss_pred             ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccC---CCccceEEEEec-CCceEEEEEe
Confidence            3345688899999999976555 6888987542    23346677776655542   235555555433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus       109 ~~~~~L  114 (326)
T 3uim_A          109 MANGSV  114 (326)
T ss_dssp             CTTCBH
T ss_pred             ccCCCH
Confidence            998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.18  E-value=1.3e-05  Score=72.44  Aligned_cols=80  Identities=14%  Similarity=0.127  Sum_probs=57.0

Q ss_pred             ceeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ...-.+.++.|..+.||++...      .+ .+++|.....    ....+..|..+++.|..+  -.+++++..... .+
T Consensus        46 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~  122 (344)
T 1rjb_A           46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH--ENIVNLLGACTL-SG  122 (344)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             HceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEee-CC
Confidence            4556678899999999999851      22 5889987532    245577899999888543  246667765443 56


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       123 ~~~lv~e~~~~g~L  136 (344)
T 1rjb_A          123 PIYLIFEYCCYGDL  136 (344)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ccEEEEecCCCCcH
Confidence            88999999998765

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.18  E-value=1.1e-05  Score=72.49  Aligned_cols=81  Identities=14%  Similarity=-0.016  Sum_probs=50.7

Q ss_pred             eeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC---CCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~~v~e~l  127 (326)
                      ..-++.++.|..+.||+....+..+++|+...........|.+++..+.-. --.+.+++......   .+..+++|||+
T Consensus        39 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~~~~~lv~e~~  117 (337)
T 3mdy_A           39 IQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMR-HENILGFIAADIKGTGSWTQLYLITDYH  117 (337)
T ss_dssp             CEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCC-CTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred             eEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhc-CCCeeeEEEEEccCCCCCCceEEEEecc
Confidence            455677888999999999887778999987543323333454444333211 12344555443321   15679999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus       118 ~~g~L  122 (337)
T 3mdy_A          118 ENGSL  122 (337)
T ss_dssp             TTCBH
T ss_pred             CCCcH
Confidence            98755

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.16  E-value=1.3e-05  Score=71.07  Aligned_cols=79  Identities=14%  Similarity=0.094  Sum_probs=50.7

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----------------------------cchHHHHHHHHHHHHh
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----------------------------PSMFEGEALGLGAMYE  100 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----------------------------~~~~~~E~~~l~~L~~  100 (326)
                      .-.+.++.|....||+.... ++ .+++|+.....                             ...+..|.++++.+..
T Consensus        16 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   95 (298)
T 2zv2_A           16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH   95 (298)
T ss_dssp             EEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCC
T ss_pred             EEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCC
Confidence            44567889999999999763 33 68888764311                             2346678888777742


Q ss_pred             cCCCCCcceeeecccC-CCceEEEEeeecCCCCC
Q 020393          101 TRTIRAPRPFKVGALP-TGGSYIIMEFIEFGSSR  133 (326)
Q Consensus       101 ~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~~~~  133 (326)
                         -.+++++...... .+..+++||+++|..+.
T Consensus        96 ---~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~  126 (298)
T 2zv2_A           96 ---PNVVKLVEVLDDPNEDHLYMVFELVNQGPVM  126 (298)
T ss_dssp             ---TTBCCEEEEEECSSSSEEEEEEECCTTCBSC
T ss_pred             ---CCCCeEEEEEEcCCCCEEEEEEecCCCCcHH
Confidence               2355666543322 35789999999987663

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.15  E-value=1.5e-05  Score=70.84  Aligned_cols=95  Identities=9%  Similarity=0.009  Sum_probs=62.5

Q ss_pred             CchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC----C---cchHHHHHHHHHHHHhcCCCCC
Q 020393           34 SDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI----G---PSMFEGEALGLGAMYETRTIRA  106 (326)
Q Consensus        34 ~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~----~---~~~~~~E~~~l~~L~~~~~~~v  106 (326)
                      +.+++.+.........-...-+.++.|..+.||+...++..+++|.....    .   ...+..|..+++.+..   -.+
T Consensus        16 ~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i   92 (307)
T 2nru_A           16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH---ENL   92 (307)
T ss_dssp             CHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC---TTB
T ss_pred             cHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC---CCe
Confidence            55666655544422211122367888999999999877678999987531    1   2346678888877742   346


Q ss_pred             cceeeecccCCCceEEEEeeecCCCC
Q 020393          107 PRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       107 P~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ++++..... .+..+++|++++|.++
T Consensus        93 ~~~~~~~~~-~~~~~lv~e~~~~~~L  117 (307)
T 2nru_A           93 VELLGFSSD-GDDLCLVYVYMPNGSL  117 (307)
T ss_dssp             CCEEEEECS-SSSCEEEEECCTTCBH
T ss_pred             EEEEEEEec-CCceEEEEEecCCCcH
Confidence            667765443 4688999999998654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.15  E-value=1.6e-05  Score=71.40  Aligned_cols=79  Identities=11%  Similarity=0.007  Sum_probs=54.1

Q ss_pred             ceeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ++.=++.+|.|.+..||+-...      ++ .+.+|.-...    ....+..|+.++..|..   -.+-++++.... ++
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~H---pNIV~l~g~~~~-~~  102 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH---PNVVCLLGVVTK-DQ  102 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SS
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCC---CCCCCcceEEEE-CC
Confidence            4444678999999999997641      22 5677876432    23457889998888753   235556665433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..++||||++|+++
T Consensus       103 ~~~lV~Ey~~~G~L  116 (308)
T 4gt4_A          103 PLSMIFSYCSHGDL  116 (308)
T ss_dssp             SCEEEEECCSSCBH
T ss_pred             EEEEEEEcCCCCcH
Confidence            78999999999865

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.15  E-value=8.6e-06  Score=74.57  Aligned_cols=79  Identities=16%  Similarity=0.085  Sum_probs=53.9

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|....||++.... + .|.+|+...      .....+..|..++..+..+  -.+++++..... .+..|+
T Consensus        25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~h--p~Iv~l~~~~~~-~~~~~l  101 (353)
T 3txo_A           25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH--PFLTQLFCCFQT-PDRLFF  101 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCC--CceeeEEEEEEe-CCEEEE
Confidence            3446678899999999998643 3 688898653      1223455677777766543  245666665443 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|..+
T Consensus       102 v~E~~~gg~L  111 (353)
T 3txo_A          102 VMEFVNGGDL  111 (353)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999998755

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.15  E-value=3.7e-06  Score=74.97  Aligned_cols=75  Identities=12%  Similarity=0.044  Sum_probs=48.7

Q ss_pred             eEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC---CCceEEEE
Q 020393           55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIM  124 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~~v~  124 (326)
                      +.+|.|.+..||+.... .+ .+.+|.-...     ....+..|+++++.|..   -.+.+++......   ++..|+||
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH---PNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEeeccCCCcEEEEEE
Confidence            35899999999998764 33 5667765321     12446788888877742   2355555543211   23569999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|+++
T Consensus       109 Ey~~gg~L  116 (290)
T 3fpq_A          109 ELMTSGTL  116 (290)
T ss_dssp             ECCCSCBH
T ss_pred             eCCCCCCH
Confidence            99999765

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.15  E-value=4.9e-06  Score=75.05  Aligned_cols=82  Identities=15%  Similarity=0.028  Sum_probs=48.8

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecc--cC--CCceEEEEe
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP--TGGSYIIME  125 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~--~~--~~~~~~v~e  125 (326)
                      ...-.+.++.|..+.||+...++..+++|+........+..|.++... ....--.+.+++....  ..  ....+++||
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~-~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e   92 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRV-PLMEHDNIARFIVGDERVTADGRMEYLLVME   92 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTS-TTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred             HhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHH-HhccCcchhhheecccccccCCCceEEEEEe
Confidence            455567788899999999987777899999764333333344443321 1111123444443221  11  235689999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        93 ~~~~g~L   99 (336)
T 3g2f_A           93 YYPNGSL   99 (336)
T ss_dssp             CCTTCBH
T ss_pred             cCCCCcH
Confidence            9998754

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.15  E-value=3.1e-06  Score=76.19  Aligned_cols=81  Identities=10%  Similarity=-0.005  Sum_probs=58.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~  126 (326)
                      .-.-++.++.|..+.||+....  +..+++|+........+..|..+++.|..+  -.+++++...... ....+++||+
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~~~lv~e~  114 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG--PNIITLADIVKDPVSRTPALVFEH  114 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTS--TTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCC--CCEEEeeeeeccCCCCceEEEEec
Confidence            3455677899999999999753  337899998765566788999999999743  2455666554332 3578999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus       115 ~~~~~l  120 (330)
T 3nsz_A          115 VNNTDF  120 (330)
T ss_dssp             CCCCCH
T ss_pred             cCchhH
Confidence            998643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.14  E-value=1.8e-05  Score=71.37  Aligned_cols=79  Identities=10%  Similarity=-0.048  Sum_probs=56.4

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-.-.+.++.|....||+....  +..+++|+... .....+..|..+++.|..+  -.+++++..... .+..+++||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~~~~lv~e~   86 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG--DGIPQVYYFGPC-GKYNAMVLEL   86 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSC--TTSCCEEEEEEE-TTEEEEEEEC
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCC--CCCCEEEEEEec-CCccEEEEEe
Confidence            4455677899999999999852  33789998754 2345678999999999544  346777766544 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      + |.++
T Consensus        87 ~-~~~L   91 (330)
T 2izr_A           87 L-GPSL   91 (330)
T ss_dssp             C-CCBH
T ss_pred             C-CCCH
Confidence            9 6543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.13  E-value=2.2e-05  Score=69.82  Aligned_cols=94  Identities=14%  Similarity=0.094  Sum_probs=60.0

Q ss_pred             chhHHHHHHhc-CCC---cceeeEeEeCCccccceEEEEeC-C-ccEEEEecCC---CCcchHHHHHHHHHHHHhcCCCC
Q 020393           35 DDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-A-GSFFVKTNRS---IGPSMFEGEALGLGAMYETRTIR  105 (326)
Q Consensus        35 ~~~i~~~l~~~-~~~---~~v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~  105 (326)
                      ++++.+-+... ..+   .+-.-++.++.|..+.||+.... + ..+++|....   .....+..|..+++.+..   -.
T Consensus         2 ~e~~~~~l~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h---p~   78 (297)
T 3fxz_A            2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PN   78 (297)
T ss_dssp             HHHHHHHHHHHSBSSCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC---TT
T ss_pred             hHHHHhhhhcccCcCChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCC---CC
Confidence            34555555544 222   23445677899999999999753 3 3688887642   223456678877776642   34


Q ss_pred             CcceeeecccCCCceEEEEeeecCCCC
Q 020393          106 APRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       106 vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +++++..... .+..+++|||++|.++
T Consensus        79 iv~~~~~~~~-~~~~~lv~e~~~~~~L  104 (297)
T 3fxz_A           79 IVNYLDSYLV-GDELWVVMEYLAGGSL  104 (297)
T ss_dssp             BCCEEEEEEE-TTEEEEEEECCTTCBH
T ss_pred             CCeEeEEEEE-CCEEEEEEECCCCCCH
Confidence            5666654433 4678999999998754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.12  E-value=1.1e-05  Score=71.51  Aligned_cols=77  Identities=17%  Similarity=0.049  Sum_probs=51.9

Q ss_pred             eeEeEeCCccccceEEEEeCC--ccEEEEecCCCCc------chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSIGP------SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~~------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-.+.++.|....||+.....  ..+++|+......      ..+..|...+..+..   -.+++++..... .+..|+|
T Consensus        34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv  109 (286)
T 3uqc_A           34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK---PGVARVLDVVHT-RAGGLVV  109 (286)
T ss_dssp             EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCC---CCcceeeEEEEE-CCcEEEE
Confidence            344678889999999998753  3788999865321      335566665544422   236666665543 5688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus       110 ~e~~~g~~L  118 (286)
T 3uqc_A          110 AEWIRGGSL  118 (286)
T ss_dssp             EECCCEEEH
T ss_pred             EEecCCCCH
Confidence            999998644

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.12  E-value=1e-05  Score=73.02  Aligned_cols=78  Identities=12%  Similarity=0.032  Sum_probs=53.7

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -.-++.++.|....||+....  +..+++|+....    ....+..|..+++.+..   -.+.+++..... .+..+++|
T Consensus         9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~lv~   84 (323)
T 3tki_A            9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH---ENVVKFYGHRRE-GNIQYLFL   84 (323)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCC---CCCCeEEEEEec-CCeEEEEE
Confidence            344677889999999999764  336888986431    23457788888877743   245666665443 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus        85 e~~~~~~L   92 (323)
T 3tki_A           85 EYCSGGEL   92 (323)
T ss_dssp             ECCTTEEG
T ss_pred             EcCCCCcH
Confidence            99998755

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.11  E-value=1.7e-05  Score=73.80  Aligned_cols=79  Identities=6%  Similarity=0.016  Sum_probs=54.5

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|....||++.... + .|.+|+...      .....+..|..++..+..+  -.+++++..... .+..|+
T Consensus        54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~h--p~Iv~l~~~~~~-~~~~~l  130 (396)
T 4dc2_A           54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFF  130 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCC--CCcCeeEEEEEE-CCEEEE
Confidence            3456678899999999998753 3 688887642      1234567888888777544  235566655433 568899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|..+
T Consensus       131 V~E~~~gg~L  140 (396)
T 4dc2_A          131 VIEYVNGGDL  140 (396)
T ss_dssp             EEECCTTCBH
T ss_pred             EEEcCCCCcH
Confidence            9999998754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.11  E-value=1.6e-05  Score=69.56  Aligned_cols=78  Identities=23%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-++.++.|..+.||+....++ .+++|.....  ....+..|.++++.+..   -.+++++....  .+..+++||+
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~~~~v~e~   88 (279)
T 1qpc_A           14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH---QRLVRLYAVVT--QEPIYIITEY   88 (279)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEEEC
T ss_pred             hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCC---cCcceEEEEEc--CCCcEEEEec
Confidence            455677889999999999987665 7889987643  34557788888887743   23555665433  4578999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        89 ~~~~~L   94 (279)
T 1qpc_A           89 MENGSL   94 (279)
T ss_dssp             CTTCBH
T ss_pred             CCCCCH
Confidence            998754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.11  E-value=4.8e-05  Score=68.38  Aligned_cols=96  Identities=11%  Similarity=0.173  Sum_probs=63.4

Q ss_pred             CCchhHHHHHHhc-CCC---cceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCC
Q 020393           33 LSDDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRT  103 (326)
Q Consensus        33 ~~~~~i~~~l~~~-~~~---~~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~  103 (326)
                      .+.+++++.+... +.+   ......+.++.|..+.||+.... ++ .+++|+....   ....+..|..+++.+..   
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---  101 (321)
T 2c30_A           25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH---  101 (321)
T ss_dssp             CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC---
T ss_pred             CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC---
Confidence            4668888887765 221   12345678999999999999864 34 7889987532   23446678777666532   


Q ss_pred             CCCcceeeecccCCCceEEEEeeecCCCC
Q 020393          104 IRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       104 ~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      -.+.+++..... .+..+++|||++|..+
T Consensus       102 ~niv~~~~~~~~-~~~~~lv~e~~~~~~L  129 (321)
T 2c30_A          102 FNVVEMYKSYLV-GEELWVLMEFLQGGAL  129 (321)
T ss_dssp             TTBCCEEEEEEE-TTEEEEEECCCCSCBH
T ss_pred             CCcceEEEEEEE-CCEEEEEEecCCCCCH
Confidence            235555554332 4688999999998754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.11  E-value=2e-05  Score=77.87  Aligned_cols=79  Identities=11%  Similarity=0.007  Sum_probs=51.1

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.+|.|....||++... +| .|.+|+-..      ........|...++.++...--.+.+++....+ .+..|+||
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~lylVm  271 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFIL  271 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEEEEEE
Confidence            3466899999999999864 33 688887532      223345566666666654211124445544433 56889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|+++
T Consensus       272 Ey~~GGdL  279 (689)
T 3v5w_A          272 DLMNGGDL  279 (689)
T ss_dssp             CCCCSCBH
T ss_pred             ecCCCCcH
Confidence            99999765

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.10  E-value=9e-06  Score=71.28  Aligned_cols=80  Identities=19%  Similarity=0.177  Sum_probs=53.8

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +..-++.++.|..+.||+.+..+..+++|..... ....+..|..+++.+..   -.+.+++.......+..+++||+++
T Consensus        22 ~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~lv~e~~~   98 (278)
T 1byg_A           22 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMA   98 (278)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCC---TTBCCEEEEECCC--CCEEEECCCT
T ss_pred             hceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCC---CCEeeEEEEEEcCCCceEEEEecCC
Confidence            4556677888999999999887678999998653 33456678777766642   2355555543222357899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        99 ~~~L  102 (278)
T 1byg_A           99 KGSL  102 (278)
T ss_dssp             TEEH
T ss_pred             CCCH
Confidence            8654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.10  E-value=1.7e-05  Score=71.56  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=50.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC----Cc-cEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           50 HITKICPVGGGCINLASRYGTD----AG-SFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      .-.-++.++.|....||++...    ++ .+.+|+....       ....+..|..+++.+..   -.+++++..... .
T Consensus        18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~   93 (327)
T 3a62_A           18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH---PFIVDLIYAFQT-G   93 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCC---TTBCCEEEEEEC-S
T ss_pred             HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCC---CCccceeEEEEc-C
Confidence            3455677888999999999862    33 6888987532       12345678888877742   235666655433 5


Q ss_pred             CceEEEEeeecCCCC
Q 020393          118 GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~  132 (326)
                      +..|++||+++|.++
T Consensus        94 ~~~~lv~e~~~~~~L  108 (327)
T 3a62_A           94 GKLYLILEYLSGGEL  108 (327)
T ss_dssp             SCEEEEEECCTTEEH
T ss_pred             CEEEEEEeCCCCCcH
Confidence            688999999998654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.09  E-value=7.5e-06  Score=73.93  Aligned_cols=75  Identities=16%  Similarity=0.138  Sum_probs=53.9

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +.++.|..+.||+....  +..+++|+...........|...++.+..+  -.+++++..... .+..++|||+++|.++
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h--~niv~~~~~~~~-~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGH--PNIVKLHEVFHD-QLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCC--CCeeEEEEEEEc-CCEEEEEEEccCCCcH
Confidence            46888999999998864  337899987654344567788888877643  346666665443 4678999999998654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.08  E-value=4.8e-05  Score=69.90  Aligned_cols=79  Identities=18%  Similarity=0.165  Sum_probs=54.5

Q ss_pred             eeeEeEeCCccccceEEEEeC--------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           51 ITKICPVGGGCINLASRYGTD--------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      ..-.+.++.|....||+....        ++ .+.+|+.....    ...+..|..+++.+..+  -.+++++..... .
T Consensus        83 ~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--pnIv~~~~~~~~-~  159 (370)
T 2psq_A           83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-D  159 (370)
T ss_dssp             EEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCC--TTBCCEEEEECS-S
T ss_pred             CEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCC--CCEeeEEEEEcc-C
Confidence            344567899999999998742        12 48889876432    23456788888877433  246667665433 5


Q ss_pred             CceEEEEeeecCCCC
Q 020393          118 GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~  132 (326)
                      +..|+||||++|.++
T Consensus       160 ~~~~lv~e~~~~g~L  174 (370)
T 2psq_A          160 GPLYVIVEYASKGNL  174 (370)
T ss_dssp             SSCEEEEECCTTCBH
T ss_pred             CCEEEEEEcCCCCCH
Confidence            688999999998755

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.07  E-value=5.5e-05  Score=68.22  Aligned_cols=80  Identities=16%  Similarity=0.104  Sum_probs=56.0

Q ss_pred             ceeeEeEeCCccccceEEEEeC--------C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393           50 HITKICPVGGGCINLASRYGTD--------A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  116 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--------~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~  116 (326)
                      +..-.+.++.|..+.||+....        + ..+++|+.....    ...+..|..+++.+..+  -.+++++..... 
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-  112 (334)
T 2pvf_A           36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH--KNIINLLGACTQ-  112 (334)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-
T ss_pred             HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcC--CCEeeEEEEEcc-
Confidence            4555678899999999999752        1 258899886432    23456788888888443  246667665443 


Q ss_pred             CCceEEEEeeecCCCC
Q 020393          117 TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       117 ~~~~~~v~e~l~G~~~  132 (326)
                      .+..++|||+++|.++
T Consensus       113 ~~~~~lv~e~~~~~~L  128 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNL  128 (334)
T ss_dssp             SSCCEEEEECCTTCBH
T ss_pred             CCceEEEEECCCCCcH
Confidence            5688999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.06  E-value=2.3e-05  Score=74.04  Aligned_cols=80  Identities=19%  Similarity=0.177  Sum_probs=57.5

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +..-.+.++.|....||+....+..+++|..... ....+..|+.+++.+..   -.+.+++.......+..++|||+++
T Consensus       194 ~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~iv~e~~~  270 (450)
T 1k9a_A          194 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMA  270 (450)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCC---TTBCCEEEEEECTTSCEEEEEECCT
T ss_pred             HeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccC---CCEEEEEEEEEcCCCceEEEEEecC
Confidence            3445677899999999999887778999988653 34557789888877743   2355666543322347899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus       271 ~g~L  274 (450)
T 1k9a_A          271 KGSL  274 (450)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            8755

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.06  E-value=2.2e-05  Score=73.39  Aligned_cols=79  Identities=13%  Similarity=0.071  Sum_probs=54.7

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      .-.-++.++.|....||++.... + .|.+|+...      .....+..|..++..+..   -.+.+++..... .+..|
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~-~~~~~  145 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS---PWVVQLFYAFQD-DRYLY  145 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEE
Confidence            34456778999999999998743 3 688887532      234557788888876642   235566655433 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +||||++|+++
T Consensus       146 lV~E~~~gg~L  156 (410)
T 3v8s_A          146 MVMEYMPGGDL  156 (410)
T ss_dssp             EEECCCTTEEH
T ss_pred             EEEeCCCCCcH
Confidence            99999998654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.05  E-value=5.8e-05  Score=69.59  Aligned_cols=80  Identities=16%  Similarity=0.097  Sum_probs=55.9

Q ss_pred             ceeeEeEeCCccccceEEEEeCC---------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC
Q 020393           50 HITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP  116 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~  116 (326)
                      +..-.+.++.|..+.||+.....         ..+++|+.....    ...+..|.++++.+..+  -.+++++..... 
T Consensus        70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--pnIv~~~~~~~~-  146 (382)
T 3tt0_A           70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-  146 (382)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-
T ss_pred             heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCC--chhhhheeeecc-
Confidence            34556778999999999987421         158889876432    23466788888888543  346667765443 


Q ss_pred             CCceEEEEeeecCCCC
Q 020393          117 TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       117 ~~~~~~v~e~l~G~~~  132 (326)
                      .+..++|||+++|.++
T Consensus       147 ~~~~~lv~e~~~~g~L  162 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNL  162 (382)
T ss_dssp             SSSCEEEEECCTTCBH
T ss_pred             CCceEEEEEecCCCcH
Confidence            5678999999998754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.05  E-value=0.00012  Score=65.17  Aligned_cols=79  Identities=15%  Similarity=0.111  Sum_probs=54.2

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +..-.+.++.|....||++...  +..+++|......   ...+..|.++++.+..   -.+++++..... ++..++||
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~   86 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH---PNVLKFIGVLYK-DKRLNFIT   86 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---cCcccEEEEEec-CCeeEEEE
Confidence            4555677899999999999864  3368888764422   2445678777766642   245666655433 56889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|.++
T Consensus        87 e~~~~~~L   94 (310)
T 3s95_A           87 EYIKGGTL   94 (310)
T ss_dssp             ECCTTCBH
T ss_pred             EecCCCcH
Confidence            99998754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.05  E-value=1.2e-05  Score=71.95  Aligned_cols=76  Identities=16%  Similarity=0.060  Sum_probs=46.0

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----------
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----------  116 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----------  116 (326)
                      ++.+|.|....||+....  +..|.+|.-....    ...+..|+.+++.|..   -.+.+++......           
T Consensus        10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~H---pnIV~~~~~~~~~~~~~~~~~~~~   86 (299)
T 4g31_A           10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH---PGIVRYFNAWLEKNTTEKLQPSSP   86 (299)
T ss_dssp             EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEEEC----------
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEecCccccccccCC
Confidence            567899999999999763  3378888653211    2345678877766632   1244455432110           


Q ss_pred             CCceEEEEeeecCCCC
Q 020393          117 TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       117 ~~~~~~v~e~l~G~~~  132 (326)
                      ....|++|||++|+++
T Consensus        87 ~~~l~ivmE~~~gg~L  102 (299)
T 4g31_A           87 KVYLYIQMQLCRKENL  102 (299)
T ss_dssp             CEEEEEEEECCCSCCH
T ss_pred             CcEEEEEEecCCCCcH
Confidence            1235899999999765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.03  E-value=2.3e-05  Score=69.75  Aligned_cols=80  Identities=15%  Similarity=0.181  Sum_probs=56.8

Q ss_pred             ceeeEeEeCCccccceEEEEe------CCc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGT------DAG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~------~~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-.+.++.|....||+.+.      .++ .+++|......    ...+..|..+++.|..+  -.+++++..... .+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~-~~  100 (313)
T 1t46_A           24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MNIVNLLGACTI-GG  100 (313)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccC--CCeeeEEEEEec-CC
Confidence            556667889999999999974      122 68899886432    24467888888888443  246667765443 56


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       101 ~~~lv~e~~~~~~L  114 (313)
T 1t46_A          101 PTLVITEYCCYGDL  114 (313)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             CcEEEEecCCCCCH
Confidence            88999999998654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.03  E-value=4.4e-05  Score=68.30  Aligned_cols=76  Identities=20%  Similarity=0.124  Sum_probs=52.9

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +-.-++.++.|..+.||+....++ .+++|.....  .   ...+..|..+++.+..   -.+.+++..... ++..+++
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv   97 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH---PNIVSLIDVIHS-ERCLTLV   97 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCC---TTBCCEEEEECC-SSCEEEE
T ss_pred             hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCC---CCEeeeeeEEcc-CCEEEEE
Confidence            455677889999999999987655 6888987532  1   2345678888877742   245666665433 4678999


Q ss_pred             EeeecC
Q 020393          124 MEFIEF  129 (326)
Q Consensus       124 ~e~l~G  129 (326)
                      ||+++|
T Consensus        98 ~e~~~~  103 (311)
T 3niz_A           98 FEFMEK  103 (311)
T ss_dssp             EECCSE
T ss_pred             EcCCCC
Confidence            999987

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.03  E-value=1.6e-05  Score=72.73  Aligned_cols=79  Identities=10%  Similarity=-0.017  Sum_probs=54.3

Q ss_pred             eeeEeEeCCccccceEEEEeC-----CccEEEEecCC-------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           51 ITKICPVGGGCINLASRYGTD-----AGSFFVKTNRS-------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-----~~~~vlK~~~~-------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ..-++.++.|....||++...     +..+.+|+...       .....+..|.++++.+..+  -.+++++..... .+
T Consensus        56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~  132 (355)
T 1vzo_A           56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS--PFLVTLHYAFQT-ET  132 (355)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC--TTBCCEEEEEEE-TT
T ss_pred             eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCC--CceeEEEEEEee-Cc
Confidence            445667888999999999862     23688888642       1234456789999998754  235555554332 46


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..++||||++|.++
T Consensus       133 ~~~lv~e~~~~~~L  146 (355)
T 1vzo_A          133 KLHLILDYINGGEL  146 (355)
T ss_dssp             EEEEEECCCCSCBH
T ss_pred             eEEEEeecCCCCCH
Confidence            88999999998754

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.03  E-value=2.5e-05  Score=67.98  Aligned_cols=79  Identities=18%  Similarity=-0.013  Sum_probs=53.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      +..-.+.++.|..+.||+....+..+++|+....       ....+..|..+++.+..   -.+++++..... .+..++
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   83 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH---PNIIALRGVCLK-EPNLCL   83 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCC---TTBCCEEEEECC-C--CEE
T ss_pred             heeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCC---CCEeeEEEEEec-CCceEE
Confidence            3455667888999999999887778999987532       12345678777777642   245666665433 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus        84 v~e~~~~~~L   93 (271)
T 3dtc_A           84 VMEFARGGPL   93 (271)
T ss_dssp             EEECCTTEEH
T ss_pred             EEEcCCCCCH
Confidence            9999998654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.02  E-value=4.3e-05  Score=67.49  Aligned_cols=80  Identities=11%  Similarity=0.025  Sum_probs=54.7

Q ss_pred             ceeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCC------------cchHHHHHHHHHHHHhcCCCCCcceeeeccc
Q 020393           50 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG------------PSMFEGEALGLGAMYETRTIRAPRPFKVGAL  115 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~------------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~  115 (326)
                      .-.-.+.++.|..+.||+.... + ..+++|+.....            ...+..|..+++.+..+  -.+++++.....
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~   95 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH--PNIIQLKDTYET   95 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC
T ss_pred             ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC--CCEeeeeeeecc
Confidence            4455677888889999999874 3 378999875321            12345788888887643  246666665433


Q ss_pred             CCCceEEEEeeecCCCC
Q 020393          116 PTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       116 ~~~~~~~v~e~l~G~~~  132 (326)
                       .+..+++||+++|.++
T Consensus        96 -~~~~~lv~e~~~~~~L  111 (298)
T 1phk_A           96 -NTFFFLVFDLMKKGEL  111 (298)
T ss_dssp             -SSEEEEEEECCTTCBH
T ss_pred             -CCeEEEEEeccCCCcH
Confidence             4678999999998654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.01  E-value=3.8e-05  Score=70.06  Aligned_cols=79  Identities=14%  Similarity=0.045  Sum_probs=53.9

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-.+.++.|..+.||++... ++ .|.+|+...      .....+..|..++..+..+  -.+++++..... .+..|+
T Consensus        19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~h--p~iv~l~~~~~~-~~~~~l   95 (345)
T 1xjd_A           19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHMFCTFQT-KENLFF   95 (345)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCC--CCCCcEEEEEEe-CCEEEE
Confidence            444567888999999999874 33 688898642      1233456788777766443  235566655443 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|+++
T Consensus        96 v~E~~~gg~L  105 (345)
T 1xjd_A           96 VMEYLNGGDL  105 (345)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeCCCCCcH
Confidence            9999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.00  E-value=2.7e-05  Score=67.53  Aligned_cols=79  Identities=19%  Similarity=0.124  Sum_probs=56.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-++.++.|..+.||+....++ .+++|.....  ....+..|.++++.+..   -.+++++..... .+..+++||+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   84 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---PKLVQLYGVCLE-QAPICLVTEF   84 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSSCEEEECC
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCCeEEEEeC
Confidence            445567788899999999987554 7899988653  23456778887776642   235566655433 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        85 ~~~~~L   90 (267)
T 3t9t_A           85 MEHGCL   90 (267)
T ss_dssp             CTTCBH
T ss_pred             CCCCcH
Confidence            998654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.00  E-value=3.6e-05  Score=69.26  Aligned_cols=77  Identities=14%  Similarity=0.063  Sum_probs=53.7

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .-.+.++.|....||++.... + .+++|......  ...+..|..+++.+..   -.+++++..... .+..+++||++
T Consensus         8 ~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~lv~e~~   83 (321)
T 1tki_A            8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH---RNILHLHESFES-MEELVMIFEFI   83 (321)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC---TTBCCEEEEEEE-TTEEEEEECCC
T ss_pred             EeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCC---CCCCeEeEEEec-CCEEEEEEEeC
Confidence            345678889999999998643 3 68888875432  3446678888877742   235666655433 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        84 ~g~~L   88 (321)
T 1tki_A           84 SGLDI   88 (321)
T ss_dssp             CCCBH
T ss_pred             CCCCH
Confidence            98654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.98  E-value=2.3e-05  Score=75.95  Aligned_cols=75  Identities=23%  Similarity=0.148  Sum_probs=49.6

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.++.|....||+.+..+..+++|......           ...+..|.++++.+... .+..|..+..+   .+..|+
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~-nIv~~~~~~~~---~~~~~l  416 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF-GIPAPYIFDVD---LDNKRI  416 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGG-TCCCCCEEEEE---TTTTEE
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCC-CcCceEEEEEe---CCccEE
Confidence            3568889999999997667788888754311           12357899999999654 56666777664   357799


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|.++
T Consensus       417 VmE~~~ggsL  426 (540)
T 3en9_A          417 MMSYINGKLA  426 (540)
T ss_dssp             EEECCCSEEH
T ss_pred             EEECCCCCCH
Confidence            9999998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.98  E-value=5.1e-05  Score=67.97  Aligned_cols=76  Identities=14%  Similarity=0.084  Sum_probs=51.5

Q ss_pred             eEeEeCCccccceEEEEeCCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           53 KICPVGGGCINLASRYGTDAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      -.+.++.|....||+....++ .+++|......   ...+..|..+++.+..   -.+++++..... .+..+++||+++
T Consensus        43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~~  118 (321)
T 2qkw_B           43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRH---PHLVSLIGFCDE-RNEMILIYKYME  118 (321)
T ss_dssp             CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCC---TTBCCEEEECCC-TTCCEEEEECCT
T ss_pred             ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcC-CCeEEEEEEcCC
Confidence            345578899999999987544 78889876432   2345567666655532   235566655433 568899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus       119 ~~~L  122 (321)
T 2qkw_B          119 NGNL  122 (321)
T ss_dssp             TCBT
T ss_pred             CCcH
Confidence            8876

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=97.98  E-value=3.9e-05  Score=68.77  Aligned_cols=81  Identities=14%  Similarity=0.016  Sum_probs=55.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCC--CCcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCce
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRS--IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~--~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~  120 (326)
                      .-.-++.++.|....||+....  +..+++|+...  .....+..|...++.+..+  -.+++++......     .+..
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h--~~i~~~~~~~~~~~~~~~~~~~  102 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH--RNIATYYGAFIKKNPPGMDDQL  102 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCS--TTBCCEEEEEEECC--CCCCEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCC--CCeeeeeeEEeeccCccccceE
Confidence            3455677888999999999873  34788898753  2345677888888888543  2356666543221     3578


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus       103 ~lv~e~~~~~~L  114 (326)
T 2x7f_A          103 WLVMEFCGAGSV  114 (326)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEEcCCCCcH
Confidence            999999998654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.98  E-value=4.5e-05  Score=69.30  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=56.5

Q ss_pred             ceeeEeEeCCccccceEEEEeC------C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD------A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-.+.++.|....||+....      + ..+++|......    ...+..|.+++..+..+  -.+.+++.......+
T Consensus        23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--pniv~~~~~~~~~~~  100 (359)
T 3vhe_A           23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG  100 (359)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECSTTS
T ss_pred             ceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCC--cceeeeeeeeecCCC
Confidence            5566778999999999999731      2 268899876422    23467889888888543  246667765443234


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++|||++|+++
T Consensus       101 ~~~iv~e~~~~g~L  114 (359)
T 3vhe_A          101 PLMVIVEFCKFGNL  114 (359)
T ss_dssp             CCEEEEECCTTEEH
T ss_pred             ceEEEEEecCCCcH
Confidence            68999999998764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.97  E-value=7e-05  Score=66.79  Aligned_cols=77  Identities=19%  Similarity=0.147  Sum_probs=55.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCC-cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      +..-.+.++.|..+.||+....+..+++|...... ...+..|...++.+..   -.+.+++...   .+..+++|||++
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~---~~~~~lv~e~~~   82 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNH---PNIVKLYGAC---LNPVCLVMEYAE   82 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCC---TTBCCEEEBC---TTTTEEEEECCT
T ss_pred             HeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCC---CCcCeEEEEE---cCCcEEEEEcCC
Confidence            34456678899999999998877789999876432 3456678887777642   2355566544   246899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus        83 ~~~L   86 (307)
T 2eva_A           83 GGSL   86 (307)
T ss_dssp             TCBH
T ss_pred             CCCH
Confidence            8754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.97  E-value=3.3e-05  Score=72.84  Aligned_cols=79  Identities=13%  Similarity=0.052  Sum_probs=54.6

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ...-++.++.|....||++...+ + .|.+|+...      .....+..|..++..+..   -.+.+++..... .+..|
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~h---p~Iv~l~~~~~~-~~~~~  150 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS---KWITTLHYAFQD-DNNLY  150 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCT---TTBCCEEEEEEC-SSEEE
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEee-CCEEE
Confidence            34556778999999999998754 3 688887642      223447788888776532   235556654433 46889


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +||||++|+++
T Consensus       151 lV~Ey~~gg~L  161 (437)
T 4aw2_A          151 LVMDYYVGGDL  161 (437)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEecCCCCcH
Confidence            99999998754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=97.97  E-value=2.3e-05  Score=71.39  Aligned_cols=79  Identities=8%  Similarity=0.018  Sum_probs=52.9

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ..-++.++.|..+.||++.... + .|.+|+....   .   ...+..|..++..+..+  -.+.+++..... .+..|+
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~l~~~~~~-~~~~~l   87 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH--PFLVGLHSCFQT-ESRLFF   87 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCC--CccCeEEEEEEe-CCEEEE
Confidence            3446678889999999998643 3 6888987531   1   12355677777666433  235566655433 568899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      |||+++|..+
T Consensus        88 v~e~~~gg~L   97 (345)
T 3a8x_A           88 VIEYVNGGDL   97 (345)
T ss_dssp             EECCCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999998755

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=97.97  E-value=1.8e-05  Score=72.41  Aligned_cols=79  Identities=13%  Similarity=0.026  Sum_probs=51.3

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|..+.||++.... + .|.+|+...      .....+..|..++..+..+  -.+++++..... .+..|+
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h--p~iv~l~~~~~~-~~~~~l   98 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYF   98 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCC--TTBCCEEEEEEC-SSEEEE
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCC--CEEeeEEEEEEc-CCEEEE
Confidence            4456678889999999998754 3 688898643      1223345566665544322  235555554433 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|+++
T Consensus        99 v~E~~~gg~L  108 (353)
T 2i0e_A           99 VMEYVNGGDL  108 (353)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999755

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=97.96  E-value=7.5e-05  Score=65.75  Aligned_cols=78  Identities=14%  Similarity=0.003  Sum_probs=54.6

Q ss_pred             ceeeEeEeCCccccceEEEEe--CCccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGT--DAGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~--~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-.-.+.++.|..+.||+...  ++..+++|+... .....+..|..+++.+...  ..+|.+...... .+..+++||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~   86 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG--VGIPTIRWCGAE-GDYNVMVMEL   86 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTS--TTCCCEEEEEEE-TTEEEEEEEC
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcC--CCCCccccccCC-CCceEEEEEe
Confidence            445567788899999999985  234789998653 2345678899999999764  335555444332 4677999999


Q ss_pred             ecCCC
Q 020393          127 IEFGS  131 (326)
Q Consensus       127 l~G~~  131 (326)
                      + |.+
T Consensus        87 ~-~~~   90 (296)
T 3uzp_A           87 L-GPS   90 (296)
T ss_dssp             C-CCB
T ss_pred             c-CCC
Confidence            9 543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=97.96  E-value=6.9e-05  Score=66.64  Aligned_cols=79  Identities=14%  Similarity=0.055  Sum_probs=51.4

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC---
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT---  117 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~---  117 (326)
                      -.-++.++.|..+.||+....  +..+++|.....        .......|.+.++.+....--.+++++.......   
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~   90 (308)
T 3g33_A           11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR   90 (308)
T ss_dssp             CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence            344667899999999999852  336888976421        1234668888888887421234666665433211   


Q ss_pred             -CceEEEEeeecC
Q 020393          118 -GGSYIIMEFIEF  129 (326)
Q Consensus       118 -~~~~~v~e~l~G  129 (326)
                       ...+++||+++|
T Consensus        91 ~~~~~lv~e~~~~  103 (308)
T 3g33_A           91 EIKVTLVFEHVDQ  103 (308)
T ss_dssp             EEEEEEEEECCCC
T ss_pred             ceeEEEEehhhhc
Confidence             146899999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.96  E-value=3.5e-05  Score=69.53  Aligned_cols=79  Identities=15%  Similarity=0.201  Sum_probs=55.7

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ...-++.++.|..+.||+....+       ..+++|......    ...+..|..+++.+..   -.+++++..... .+
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~  123 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN---PNIVKLLGVCAV-GK  123 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SS
T ss_pred             HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcc-CC
Confidence            45667789999999999998643       368899986532    2345678877776632   346666665433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++|||++|.++
T Consensus       124 ~~~lv~e~~~~~~L  137 (343)
T 1luf_A          124 PMCLLFEYMAYGDL  137 (343)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEecCCCCcH
Confidence            88999999998765

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=97.96  E-value=2.1e-05  Score=71.80  Aligned_cols=78  Identities=14%  Similarity=0.031  Sum_probs=50.9

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|....||++...  +..|++|+...      .....+..|..+++.+..   -.+++++..... .+..|+
T Consensus        43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~l  118 (350)
T 1rdq_E           43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF---PFLVKLEFSFKD-NSNLYM  118 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEc-CCEEEE
Confidence            445677899999999999874  33788998642      122334567666655421   234555554332 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|.++
T Consensus       119 v~e~~~gg~L  128 (350)
T 1rdq_E          119 VMEYVAGGEM  128 (350)
T ss_dssp             EEECCTTCBH
T ss_pred             EEcCCCCCcH
Confidence            9999998754

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.96  E-value=1.1e-05  Score=72.93  Aligned_cols=46  Identities=13%  Similarity=-0.015  Sum_probs=35.1

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCC-----------cchHHHHHHHHHHHH
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----------PSMFEGEALGLGAMY   99 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----------~~~~~~E~~~l~~L~   99 (326)
                      .+.++.|....||+...++..+++|......           ...+..|..+++.|.
T Consensus        25 ~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   81 (336)
T 2vuw_A           25 CEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELS   81 (336)
T ss_dssp             CEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHH
T ss_pred             eeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHH
Confidence            4568889999999998866688999875321           145678999999887

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=97.95  E-value=1.7e-05  Score=71.79  Aligned_cols=78  Identities=14%  Similarity=0.077  Sum_probs=53.3

Q ss_pred             eeeEeEeCCccccceEEEEe-C-CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGT-D-AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~-~-~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-++.++.|....||+... . +..+++|+....  .   ...+..|..+++.+..   -.+++++..... .+..|+|
T Consensus        17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~-~~~~~lv   92 (328)
T 3fe3_A           17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH---PNIVKLFEVIET-EKTLYLI   92 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCEEEEE
Confidence            34467788899999999986 2 347888986431  1   2335578887777742   246666665443 5688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        93 ~e~~~~~~L  101 (328)
T 3fe3_A           93 MEYASGGEV  101 (328)
T ss_dssp             ECCCTTCBH
T ss_pred             EECCCCCcH
Confidence            999998654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=97.95  E-value=2.8e-05  Score=70.67  Aligned_cols=78  Identities=12%  Similarity=-0.043  Sum_probs=51.1

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|....||++...  +..|++|+...      .....+..|..+++.+..   -.+++++..... .+..++
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~l~~~~~~-~~~~~l   82 (337)
T 1o6l_A            7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCF   82 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCC---CcCcceEEEEEe-CCEEEE
Confidence            344567888999999999864  33688898642      122345567766655431   235555554433 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|..+
T Consensus        83 v~E~~~gg~L   92 (337)
T 1o6l_A           83 VMEYANGGEL   92 (337)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeCCCCCcH
Confidence            9999998754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.95  E-value=2.4e-05  Score=70.00  Aligned_cols=79  Identities=19%  Similarity=0.142  Sum_probs=51.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-.+.++.|....||+....       ...+++|......    ...+..|..+++.+..   -.+++++..... .+
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~  101 (322)
T 1p4o_A           26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQ  101 (322)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC---TTBCCEEEEECS-SS
T ss_pred             heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCC---CCEeeeEEEEcc-CC
Confidence            4555677888999999997643       2368889876432    1224456666655532   245666655433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       102 ~~~lv~e~~~~~~L  115 (322)
T 1p4o_A          102 PTLVIMELMTRGDL  115 (322)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ccEEEEEeCCCCcH
Confidence            78999999998765

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.94  E-value=2.9e-05  Score=68.21  Aligned_cols=79  Identities=23%  Similarity=0.151  Sum_probs=56.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCC--ccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           50 HITKICPVGGGCINLASRYGTDA--GSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ...-.+.++.|..+.||+.....  ..+++|......  ...+..|..+++.+..   -.+++++..... ++..+++||
T Consensus        14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v~e   89 (288)
T 3kfa_A           14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITE   89 (288)
T ss_dssp             GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSEEEEEE
T ss_pred             ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEcc-CCCEEEEEE
Confidence            45556778999999999998753  368889876532  3446678888887753   245666665433 567899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus        90 ~~~~~~L   96 (288)
T 3kfa_A           90 FMTYGNL   96 (288)
T ss_dssp             CCTTEEH
T ss_pred             cCCCCcH
Confidence            9998654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=97.94  E-value=1.8e-05  Score=71.59  Aligned_cols=79  Identities=16%  Similarity=0.058  Sum_probs=54.3

Q ss_pred             eeeEeEeCCccccceEEEEeCCccEEEEecCCC---Cc-----------------chHHHHHHHHHHHHhcCCCCCccee
Q 020393           51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GP-----------------SMFEGEALGLGAMYETRTIRAPRPF  110 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~---~~-----------------~~~~~E~~~l~~L~~~~~~~vP~~~  110 (326)
                      -.-++.++.|..+.||+...++..+++|.....   ..                 ..+..|..+++.+..   -.+++++
T Consensus        33 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~  109 (348)
T 2pml_X           33 YRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN---EYCLTCE  109 (348)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC---TTBCCCS
T ss_pred             eEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC---CCcceEE
Confidence            344566888999999999885558999987421   10                 456778877776642   2355555


Q ss_pred             eecccCCCceEEEEeeecCCCCC
Q 020393          111 KVGALPTGGSYIIMEFIEFGSSR  133 (326)
Q Consensus       111 ~~~~~~~~~~~~v~e~l~G~~~~  133 (326)
                      ..... .+..+++||+++|.++.
T Consensus       110 ~~~~~-~~~~~lv~e~~~~~~L~  131 (348)
T 2pml_X          110 GIITN-YDEVYIIYEYMENDSIL  131 (348)
T ss_dssp             EEEES-SSEEEEEEECCTTCBSS
T ss_pred             EEEee-CCeEEEEEeccCCCcHH
Confidence            54332 46889999999997764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=97.94  E-value=1.8e-05  Score=69.30  Aligned_cols=78  Identities=13%  Similarity=0.038  Sum_probs=51.3

Q ss_pred             eeeEeEeCCccccceEEEEeCCc--cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDAG--SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-.+.++.|..+.||+......  .+++|....      .....+..|..+++.+..   -.+++++..... .+..++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   86 (279)
T 3fdn_A           11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH---PNILRLYGYFHD-ATRVYL   86 (279)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCC---CCCcchhheEec-CCEEEE
Confidence            34456788899999999976543  688898642      112345567766655542   246666665433 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|..+
T Consensus        87 v~e~~~~~~l   96 (279)
T 3fdn_A           87 ILEYAPLGTV   96 (279)
T ss_dssp             EECCCTTEEH
T ss_pred             EEecCCCCcH
Confidence            9999988644

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.93  E-value=8.6e-05  Score=65.16  Aligned_cols=77  Identities=14%  Similarity=0.136  Sum_probs=51.7

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC----------cchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      +..-.+.++.|....||+....  +..+++|......          ...+..|..+++.+..   -.+++++....   
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~---   93 (287)
T 4f0f_A           20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH---PNIVKLYGLMH---   93 (287)
T ss_dssp             TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCC---TTBCCEEEEET---
T ss_pred             cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCC---CCchhhheeec---
Confidence            4555677899999999999873  3378899875321          1345667777666632   24566665543   


Q ss_pred             CceEEEEeeecCCCC
Q 020393          118 GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~  132 (326)
                      ...+++||+++|.++
T Consensus        94 ~~~~lv~e~~~~~~L  108 (287)
T 4f0f_A           94 NPPRMVMEFVPCGDL  108 (287)
T ss_dssp             TTTEEEEECCTTCBH
T ss_pred             CCCeEEEEecCCCCH
Confidence            355899999998654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=97.93  E-value=6.7e-05  Score=65.99  Aligned_cols=78  Identities=14%  Similarity=-0.008  Sum_probs=52.6

Q ss_pred             eeeEeEeCCccccceEEEEe-C-CccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGT-D-AGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~-~-~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      -.-.+.++.|..+.||+... . +..+++|+... .....+..|..+++.+...  ..++.+...... .+..+++||++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~--~~i~~~~~~~~~-~~~~~lv~e~~   87 (296)
T 4hgt_A           11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG--VGIPTIRWCGAE-GDYNVMVMELL   87 (296)
T ss_dssp             CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTS--TTCCCEEEEEEE-TTEEEEEEECC
T ss_pred             eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCC--CCCCeeeeecCC-CCceEEEEEcc
Confidence            44566788899999999985 2 33789997543 2334578899999988754  334555444332 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                       |.++
T Consensus        88 -~~~L   91 (296)
T 4hgt_A           88 -GPSL   91 (296)
T ss_dssp             -CCBH
T ss_pred             -CCCH
Confidence             5443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=97.93  E-value=3.5e-05  Score=68.18  Aligned_cols=79  Identities=19%  Similarity=0.183  Sum_probs=52.1

Q ss_pred             eeeEeEeCCccccceEEEEe-----CC-ccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCc
Q 020393           51 ITKICPVGGGCINLASRYGT-----DA-GSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~-----~~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~  119 (326)
                      ..-++.++.|..+.||++..     .+ ..+++|.....    ....+..|..+++.+..   -.+++++...... ...
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH---ENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC---CC
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCC---CCeeeeeeEEecCCCce
Confidence            45567789999999999973     22 37899987642    22446778887777742   2455565543321 246


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus       100 ~~lv~e~~~~~~L  112 (302)
T 4e5w_A          100 IKLIMEFLPSGSL  112 (302)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEEeCCCCcH
Confidence            7999999998654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.93  E-value=5.5e-05  Score=70.43  Aligned_cols=76  Identities=13%  Similarity=0.057  Sum_probs=49.7

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CC
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TG  118 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~  118 (326)
                      -.-++.+|.|....||+.... +| .|.+|+-....     ...+..|.++|+.|..   -.+-+++......     .+
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH---DNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSSCTTTCC
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCC---CCcceEeeeeecccccccCC
Confidence            344677999999999999763 34 68889865321     1234578888888753   1244455432211     35


Q ss_pred             ceEEEEeeecC
Q 020393          119 GSYIIMEFIEF  129 (326)
Q Consensus       119 ~~~~v~e~l~G  129 (326)
                      ..|+||||++|
T Consensus       133 ~~~ivmE~~~g  143 (398)
T 4b99_A          133 SVYVVLDLMES  143 (398)
T ss_dssp             CEEEEEECCSE
T ss_pred             EEEEEEeCCCC
Confidence            77999999987

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=97.93  E-value=3.7e-05  Score=69.25  Aligned_cols=79  Identities=20%  Similarity=0.075  Sum_probs=52.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      +..-.+.++.|....||+.... ++    .+++|......    ...+..|..+++.|..   -.+++++..... .+..
T Consensus        50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~  125 (325)
T 3kul_A           50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH---PNIIRLEGVVTR-GRLA  125 (325)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECG-GGCC
T ss_pred             HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCcc
Confidence            4555677898999999998763 22    48899876421    2335567777666632   245666665432 4578


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      ++|||+++|.++
T Consensus       126 ~lv~e~~~~~~L  137 (325)
T 3kul_A          126 MIVTEYMENGSL  137 (325)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEeeCCCCCcH
Confidence            999999998754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=97.93  E-value=3.6e-05  Score=72.02  Aligned_cols=79  Identities=14%  Similarity=0.018  Sum_probs=54.2

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ...-++.++.|....||++...  +..|.+|+...      .....+..|..++..+..   -.+.+++..... .+..|
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~h---p~Iv~l~~~~~~-~~~~~  137 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR---RWITQLHFAFQD-ENYLY  137 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCT---TTBCCEEEEEEC-SSEEE
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCC---CCeeeEEEEEee-CCEEE
Confidence            4455677899999999999874  33788898642      123446778887766532   235556655433 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +||||++|+++
T Consensus       138 lVmE~~~gg~L  148 (412)
T 2vd5_A          138 LVMEYYVGGDL  148 (412)
T ss_dssp             EEECCCCSCBH
T ss_pred             EEEcCCCCCcH
Confidence            99999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=97.93  E-value=2e-05  Score=70.92  Aligned_cols=77  Identities=17%  Similarity=0.152  Sum_probs=50.8

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-++.++.|....||++... ++ .|.+|+...      .....+..|..+++.+..   -.+.+++..... .+..|++
T Consensus         9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~Iv~~~~~~~~-~~~~~lv   84 (318)
T 1fot_A            9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH---PFIIRMWGTFQD-AQQIFMI   84 (318)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCC---CCCceEeEEEEe-CCEEEEE
Confidence            44567888999999999874 33 688898642      122345567766655532   235556654433 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        85 ~e~~~gg~L   93 (318)
T 1fot_A           85 MDYIEGGEL   93 (318)
T ss_dssp             ECCCCSCBH
T ss_pred             EeCCCCCCH
Confidence            999998754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.92  E-value=3.9e-05  Score=69.32  Aligned_cols=79  Identities=23%  Similarity=0.140  Sum_probs=52.5

Q ss_pred             ceeeEeEeCCccccceEEEEeCC--c----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTDA--G----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~--~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ...-.+.++.|....||+.....  +    .+++|......    ...+..|..+++.+..   -.+++++..... .+.
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~  120 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH---HNIIRLEGVISK-YKP  120 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSS
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEec-CCC
Confidence            55667788999999999986532  2    38899876432    2234567766665532   235666655433 468


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus       121 ~~lv~e~~~~~~L  133 (333)
T 1mqb_A          121 MMIITEYMENGAL  133 (333)
T ss_dssp             EEEEEECCTTEEH
T ss_pred             cEEEEeCCCCCcH
Confidence            8999999998654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.92  E-value=5.7e-05  Score=69.17  Aligned_cols=81  Identities=17%  Similarity=0.158  Sum_probs=54.3

Q ss_pred             ceeeEeEeCCccccceEEEEeCC------c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTDA------G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~------~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..=.+.+|.|.+..||+.....      + .+.+|.-....    ...+..|.+++..|..+  -.+-+++.......+
T Consensus        65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hh--pnIV~l~g~~~~~~~  142 (353)
T 4ase_A           65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG  142 (353)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECCTTS
T ss_pred             HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCC--CcEEEEEEEEEecCC
Confidence            45556789999999999987432      1 36677764321    23466799888888653  236667765432134


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..++||||++|+++
T Consensus       143 ~~~iV~Ey~~~G~L  156 (353)
T 4ase_A          143 PLMVIVEFCKFGNL  156 (353)
T ss_dssp             CCEEEEECCTTEEH
T ss_pred             EEEEEEEcCCCCCH
Confidence            67999999999765

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=97.92  E-value=1.7e-05  Score=71.32  Aligned_cols=80  Identities=15%  Similarity=-0.030  Sum_probs=49.4

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCCcch--HHHHHHHHHHHHhcCCCCCcceeeecccC---CCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSM--FEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~--~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~~v~  124 (326)
                      +..-.+.++.|..+.||+.+..+..+++|+........  .+.|...++.+..   -.+.+++......   ....+++|
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKH---ENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC---TTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCC---CCchhhcceeccCCCCCceEEEEE
Confidence            34456678899999999998877789999986432222  2334433333321   2355555543221   22469999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|.++
T Consensus       102 e~~~~g~L  109 (322)
T 3soc_A          102 AFHEKGSL  109 (322)
T ss_dssp             ECCTTCBH
T ss_pred             ecCCCCCH
Confidence            99998754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=97.90  E-value=6.6e-05  Score=66.86  Aligned_cols=79  Identities=13%  Similarity=0.037  Sum_probs=51.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ...-++.++.|....||+..... + .+++|..... ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus        30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~  105 (314)
T 3com_A           30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS---PHVVKYYGSYFK-NTDLWIVMEY  105 (314)
T ss_dssp             CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEEC
T ss_pred             hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCC---CCCccEEEEEEe-CCEEEEEeec
Confidence            45556778999999999997653 3 6889987643 34456678877776632   245666654433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus       106 ~~~~~L  111 (314)
T 3com_A          106 CGAGSV  111 (314)
T ss_dssp             CTTEEH
T ss_pred             CCCCCH
Confidence            998654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=97.90  E-value=3.2e-05  Score=71.65  Aligned_cols=78  Identities=6%  Similarity=-0.020  Sum_probs=52.3

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|..+.||++.... + .|++|+...      .....+..|..+++.+..   -.+++++..... .+..|+
T Consensus        17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~-~~~~~l   92 (384)
T 4fr4_A           17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH---PFLVNLWYSFQD-EEDMFM   92 (384)
T ss_dssp             EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEEE
Confidence            3446778999999999998643 3 688897642      122345578877776632   235555554433 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      |||+++|+.+
T Consensus        93 v~e~~~gg~L  102 (384)
T 4fr4_A           93 VVDLLLGGDL  102 (384)
T ss_dssp             EECCCTTEEH
T ss_pred             EEecCCCCcH
Confidence            9999998754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.90  E-value=1.9e-05  Score=71.09  Aligned_cols=80  Identities=14%  Similarity=0.112  Sum_probs=56.4

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c------cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G------SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~------~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ...-.+.++.|....||+..... +      .+++|......    ...+..|..+++.|..+  -.+++++..... .+
T Consensus        47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--~~iv~~~~~~~~-~~  123 (333)
T 2i1m_A           47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH--ENIVNLLGACTH-GG  123 (333)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCC--CCeeeEEEEEec-CC
Confidence            45556778889999999997532 1      58888876431    24467888888888433  246667765443 56


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       124 ~~~lv~e~~~~g~L  137 (333)
T 2i1m_A          124 PVLVITEYCCYGDL  137 (333)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             ceEEEEecCCCCcH
Confidence            88999999998755

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=97.89  E-value=0.00012  Score=65.79  Aligned_cols=80  Identities=21%  Similarity=0.200  Sum_probs=54.1

Q ss_pred             ceeeEeEeCCccccceEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCc
Q 020393           50 HITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~-----~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~  119 (326)
                      +..-++.++.|..+.||+++.     ..+ .+++|......   ...+..|.++++.+..   -.+++++...... .+.
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS---DFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEECSSSCE
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCC---CceeEEEEEEecCCCce
Confidence            556677899999999999983     223 68899876532   2336678887777732   2355565433221 456


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus       101 ~~lv~e~~~~~~L  113 (327)
T 3lxl_A          101 LRLVMEYLPSGCL  113 (327)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             EEEEEeecCCCCH
Confidence            8999999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=97.89  E-value=6.7e-05  Score=68.68  Aligned_cols=79  Identities=16%  Similarity=0.042  Sum_probs=55.0

Q ss_pred             ceeeEeEeCCccccceEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           50 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +-.-++.++.|..+.||++... + ..+++|.....  ....+..|...++.|..   -.+.+++..... .+..++|||
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e   96 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH---PNIVRFKEVILT-PTHLAIIME   96 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCC---CCCCcEEEEEee-CCEEEEEEE
Confidence            3445677999999999999874 3 36888977532  23456788888777753   235566655433 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|.++
T Consensus        97 ~~~~~~L  103 (361)
T 3uc3_A           97 YASGGEL  103 (361)
T ss_dssp             CCCSCBH
T ss_pred             eCCCCCH
Confidence            9998654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.88  E-value=7.7e-05  Score=66.05  Aligned_cols=78  Identities=17%  Similarity=0.112  Sum_probs=51.0

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|....||+....  +..+++|.....   .   ...+..|...++.+..   -.+++++..... .+..++
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~iv~~~~~~~~-~~~~~l   88 (294)
T 4eqm_A           13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH---QNIVSMIDVDEE-DDCYYL   88 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCB---TTBCCEEEEEEC-SSEEEE
T ss_pred             EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCC---CCCceEEEeeee-CCeEEE
Confidence            344677888999999999754  337888976321   1   1234566666555532   235666665443 567899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus        89 v~e~~~g~~L   98 (294)
T 4eqm_A           89 VMEYIEGPTL   98 (294)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCCH
Confidence            9999998754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=97.88  E-value=5e-05  Score=66.91  Aligned_cols=73  Identities=16%  Similarity=0.158  Sum_probs=50.6

Q ss_pred             eEeEeCCccccceEEEEeCCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTDAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|....||+....++ .+++|.....     ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~   81 (288)
T 1ob3_A            6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH---SNIVKLYDVIHT-KKRLVLVFEH   81 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC---TTBCCEEEEEEC-SSCEEEEEEC
T ss_pred             hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCC---CCEeeeeeEEcc-CCeEEEEEEe
Confidence            456788899999999987544 7888877532     12445678777766642   245666655433 4688999999


Q ss_pred             ecC
Q 020393          127 IEF  129 (326)
Q Consensus       127 l~G  129 (326)
                      ++|
T Consensus        82 ~~~   84 (288)
T 1ob3_A           82 LDQ   84 (288)
T ss_dssp             CSE
T ss_pred             cCC
Confidence            986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.88  E-value=5.5e-05  Score=66.09  Aligned_cols=77  Identities=14%  Similarity=0.034  Sum_probs=52.4

Q ss_pred             eeEeEeCCccccceEEEEeCCc--cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           52 TKICPVGGGCINLASRYGTDAG--SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-.+.++.|..+.||+......  .+++|....   .....+..|.++++.+..   -.+++++..... .+..+++||+
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   87 (277)
T 3f3z_A           12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH---PNIIRLYETFED-NTDIYLVMEL   87 (277)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEEEC
T ss_pred             EeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCC---CCEeeEEEEEec-CCeEEEEEec
Confidence            3445688899999999976443  677777643   233556778888777732   245666665433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        88 ~~~~~L   93 (277)
T 3f3z_A           88 CTGGEL   93 (277)
T ss_dssp             CCSCBH
T ss_pred             cCCCcH
Confidence            998654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=97.88  E-value=3.1e-05  Score=67.50  Aligned_cols=76  Identities=12%  Similarity=0.041  Sum_probs=51.2

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      -++.++.|....||+....  +..+++|+....    ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   86 (276)
T 2yex_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH---ENVVKFYGHRRE-GNIQYLFLEY   86 (276)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEEC
T ss_pred             EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCC---CCceeeeeEEEc-CCEEEEEEEe
Confidence            3456888889999999764  347888986431    12445677776665532   346666665443 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        87 ~~~~~L   92 (276)
T 2yex_A           87 CSGGEL   92 (276)
T ss_dssp             CTTEEG
T ss_pred             cCCCcH
Confidence            998655

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=97.87  E-value=4.7e-05  Score=70.13  Aligned_cols=78  Identities=21%  Similarity=0.098  Sum_probs=53.5

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      ..-.+.++.|....||+.... ++ .+.+|......    ...+..|..+++.+..   -.+.+++..... .+..++||
T Consensus       116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~  191 (377)
T 3cbl_A          116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH---PNIVRLIGVCTQ-KQPIYIVM  191 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCC---TTBCCEEEEECS-SSSCEEEE
T ss_pred             eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEec-CCCcEEEE
Confidence            344677899999999999875 33 68889876421    2345678877776642   245666665433 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|.++
T Consensus       192 e~~~~g~L  199 (377)
T 3cbl_A          192 ELVQGGDF  199 (377)
T ss_dssp             ECCTTCBH
T ss_pred             EcCCCCCH
Confidence            99998654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.87  E-value=3.6e-05  Score=66.75  Aligned_cols=80  Identities=11%  Similarity=0.085  Sum_probs=50.9

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      +..-.+.++.|..+.||+....+..+++|......     ...+..|..+++.+..   -.+.+++...... .+..+++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH---PNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSC---TTEECEEEEECTTTSSSCEEE
T ss_pred             HhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCC---CchhheEEEEccCCCCCeEee
Confidence            34456778899999999999877789999986432     1223445544433321   2344455443322 2577999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        88 ~e~~~~~~L   96 (271)
T 3kmu_A           88 THWMPYGSL   96 (271)
T ss_dssp             EECCTTCBH
T ss_pred             ecccCCCcH
Confidence            999998654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=97.87  E-value=8.1e-05  Score=66.66  Aligned_cols=79  Identities=20%  Similarity=0.198  Sum_probs=53.0

Q ss_pred             eeeEeEeCCccccceEEEEe------CCccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCc
Q 020393           51 ITKICPVGGGCINLASRYGT------DAGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~------~~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~  119 (326)
                      ..-++.++.|..+.||+...      ++..+++|+.....    ...+..|.++++.+..   -.+++++...... ...
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH---EHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEETTTTE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCC---cchhhEEEEEecCCCce
Confidence            35667889999999988753      12368999886532    2346778888887753   2455666544332 346


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus       110 ~~lv~e~~~~~~L  122 (318)
T 3lxp_A          110 LQLVMEYVPLGSL  122 (318)
T ss_dssp             EEEEECCCTTCBH
T ss_pred             EEEEEecccCCcH
Confidence            7999999998654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=97.87  E-value=0.00015  Score=64.04  Aligned_cols=78  Identities=14%  Similarity=0.063  Sum_probs=51.9

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -.-++.++.|..+.||+..... + .+++|.....   ....+..|..+++.+..   -.+++++..... .+..+++||
T Consensus        21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e   96 (302)
T 2j7t_A           21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH---PYIVKLLGAYYH-DGKLWIMIE   96 (302)
T ss_dssp             EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-C-CEEEEEE
T ss_pred             eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCC---CCEeeeeeeeee-CCeEEEEEE
Confidence            4456678889999999998753 3 6888887542   22445678777776632   235566654433 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|..+
T Consensus        97 ~~~~~~l  103 (302)
T 2j7t_A           97 FCPGGAV  103 (302)
T ss_dssp             CCTTEEH
T ss_pred             eCCCCcH
Confidence            9998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=97.86  E-value=3.5e-05  Score=70.25  Aligned_cols=76  Identities=11%  Similarity=-0.004  Sum_probs=50.9

Q ss_pred             eeeEeEeCCccccceEEEEe-CCc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -..++.++.|....||+... .++ .+++|......      ...+..|.++++.+..   -.+.+++..... .+..++
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~l  131 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH---PNTIQYRGCYLR-EHTAWL  131 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEE-CCeEEE
Confidence            45667899999999999985 334 68888764321      1235678877777742   234555554332 468899


Q ss_pred             EEeeecCC
Q 020393          123 IMEFIEFG  130 (326)
Q Consensus       123 v~e~l~G~  130 (326)
                      |||+++|.
T Consensus       132 v~e~~~g~  139 (348)
T 1u5q_A          132 VMEYCLGS  139 (348)
T ss_dssp             EEECCSEE
T ss_pred             EEecCCCC
Confidence            99999873

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=97.86  E-value=5.6e-05  Score=67.40  Aligned_cols=75  Identities=15%  Similarity=-0.042  Sum_probs=51.3

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      +.++.|..+.||+....  +..+++|+....   ....+..|.+++..+..+  -.+++++..... .+..++|||+++|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h--~~i~~~~~~~~~-~~~~~lv~e~~~~   95 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH--RNVLELIEFFEE-EDRFYLVFEKMRG   95 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCC--TTBCCEEEEEEE-TTEEEEEEECCTT
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCC--CCeeeEEEEEee-CCEEEEEEEcCCC
Confidence            35788999999998753  347899987542   234466788777665333  246666665433 5688999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus        96 ~~L   98 (316)
T 2ac3_A           96 GSI   98 (316)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.86  E-value=5.9e-05  Score=67.44  Aligned_cols=48  Identities=15%  Similarity=0.104  Sum_probs=32.7

Q ss_pred             eeEeEeCCccccceEEEEeC-C-ccEEEEecCCC----CcchHHHHHHHHHHHH
Q 020393           52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI----GPSMFEGEALGLGAMY   99 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~----~~~~~~~E~~~l~~L~   99 (326)
                      .-++.++.|....||+.... + ..+++|.....    ....+..|..+++.|.
T Consensus         9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   62 (332)
T 3qd2_B            9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE   62 (332)
T ss_dssp             EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCC
T ss_pred             ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCC
Confidence            34567889999999999874 3 37899986531    1244667887777663

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=97.86  E-value=5e-05  Score=68.40  Aligned_cols=75  Identities=15%  Similarity=0.056  Sum_probs=52.6

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      +.++.|..+.||++...  +..+++|+....     ....+..|..+++.+..+  -.+++++..... .+..+++||++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~iv~~~~~~~~-~~~~~lv~e~~  111 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC--PRVINLHEVYEN-TSEIILILEYA  111 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTC--TTBCCEEEEEEC-SSEEEEEEECC
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCC--CCEEEEEEEEEe-CCeEEEEEEec
Confidence            67888999999999764  337888976531     124466788777777543  346666665433 46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|..+
T Consensus       112 ~~~~L  116 (327)
T 3lm5_A          112 AGGEI  116 (327)
T ss_dssp             TTEEG
T ss_pred             CCCcH
Confidence            98765

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.85  E-value=7.6e-05  Score=66.75  Aligned_cols=79  Identities=20%  Similarity=0.114  Sum_probs=53.7

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      -.-.+.++.|....||+....  +..+++|+....    ....+..|.++++.+..   -.+++++...... ....++|
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH---KNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC---TTBCCEEEEEECTTTCCEEEE
T ss_pred             EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC---CCcceEEEEeecCCCceEEEE
Confidence            344567888999999999875  347889987542    23445678888877752   3456666544322 3467999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        88 ~e~~~~~~L   96 (319)
T 4euu_A           88 MEFCPCGSL   96 (319)
T ss_dssp             EECCTTCBH
T ss_pred             EeCCCCCCH
Confidence            999998755

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=97.85  E-value=8.6e-05  Score=65.02  Aligned_cols=78  Identities=17%  Similarity=0.126  Sum_probs=53.7

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ...-.+.++.|....||+....+.     .+++|......    ...+..|..+++.+..   -.+++++....  ++..
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~~   87 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH---PHIVKLIGIIE--EEPT   87 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCC---TTBCCEEEEEC--SSSC
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCC---CCcceEEEEEc--CCCC
Confidence            344566788899999999875322     38889876531    3446678888888843   24566665543  4577


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus        88 ~~v~e~~~~~~L   99 (281)
T 3cc6_A           88 WIIMELYPYGEL   99 (281)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEecCCCCCH
Confidence            999999998654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=97.84  E-value=4.1e-05  Score=68.15  Aligned_cols=81  Identities=17%  Similarity=0.179  Sum_probs=55.3

Q ss_pred             ceeeEeEeCCccccceEEEEe------CC-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGT------DA-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~------~~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ...-.+.++.|..+.||+...      .+ ..+++|+.....    ...+..|..++..+..+  -.+++++......++
T Consensus        28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~~~~  105 (316)
T 2xir_A           28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG  105 (316)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECCTTS
T ss_pred             heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccC--CCeeeEEEEEecCCC
Confidence            455567788899999999973      12 268899876532    23456788888888543  246666665433245


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       106 ~~~lv~e~~~~~~L  119 (316)
T 2xir_A          106 PLMVIVEFCKFGNL  119 (316)
T ss_dssp             CCEEEEECCTTEEH
T ss_pred             ceEEEEEcCCCCcH
Confidence            68999999998654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.84  E-value=0.00014  Score=67.01  Aligned_cols=79  Identities=14%  Similarity=0.222  Sum_probs=49.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .+...+.++.|....||+.... ++ .+++|+.....   ...+..|..+++.|..   -.+++++..... .+..++||
T Consensus        90 ~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~lv~  165 (373)
T 2x4f_A           90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH---ANLIQLYDAFES-KNDIVLVM  165 (373)
T ss_dssp             EEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             eeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEEEEE
Confidence            3445667999999999998763 33 78889875432   3446678777766632   246666665443 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus       166 E~~~~~~L  173 (373)
T 2x4f_A          166 EYVDGGEL  173 (373)
T ss_dssp             ECCTTCEE
T ss_pred             eCCCCCcH
Confidence            99998765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=97.84  E-value=8.2e-05  Score=65.68  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=48.7

Q ss_pred             eeEeEeCCccccceEEEEeCC--c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           52 TKICPVGGGCINLASRYGTDA--G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~--~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .-.+.++.|..+.||+....+  +   .+.+|......    ...+..|..+++.+..   -.+.+++......++..++
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH---PNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC---TTBCCCCEEECCSSSCCEE
T ss_pred             hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCC---CCEeeeeeEEEcCCCceEE
Confidence            345678999999999987532  2   36777765421    2335567776666642   2345555442222467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus       105 v~e~~~~~~L  114 (298)
T 3f66_A          105 VLPYMKHGDL  114 (298)
T ss_dssp             EEECCTTCBH
T ss_pred             EEeCCCCCCH
Confidence            9999998654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=97.84  E-value=7.8e-05  Score=71.34  Aligned_cols=78  Identities=23%  Similarity=0.152  Sum_probs=55.7

Q ss_pred             eeeEeEeCCccccceEEEEeCC--ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           51 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ..-.+.++.|....||+.....  ..+++|.....  ....+..|+.+++.|..   -.+.+++..... .+..++|||+
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~l~~~~~~-~~~~~lv~E~  297 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITEF  297 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSCEEEEEC
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCC---CCEeeEEEEEec-CCcEEEEEEc
Confidence            3445678999999999988753  37889987643  23456788888888743   245666665433 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus       298 ~~~g~L  303 (495)
T 1opk_A          298 MTYGNL  303 (495)
T ss_dssp             CTTCBH
T ss_pred             cCCCCH
Confidence            998754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=97.84  E-value=0.00016  Score=64.96  Aligned_cols=78  Identities=13%  Similarity=0.204  Sum_probs=52.5

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      +..-++.++.|..+.||+.... ++     ++++|.....    ....+..|...++.+..   -.+++++....  ++.
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~   88 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH---AHIVRLLGLCP--GSS   88 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCC---TTBCCEEEEEC--BSS
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCC---CCcCeEEEEEc--CCc
Confidence            5666788999999999999753 33     2677775431    12345567776665532   34666666543  467


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++|++++|.++
T Consensus        89 ~~~v~e~~~~~~L  101 (325)
T 3kex_A           89 LQLVTQYLPLGSL  101 (325)
T ss_dssp             EEEEEECCTTCBS
T ss_pred             cEEEEEeCCCCCH
Confidence            8999999998766

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=97.84  E-value=6.7e-05  Score=74.64  Aligned_cols=78  Identities=13%  Similarity=0.022  Sum_probs=50.3

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-++.++.|....||++.... + .|.+|+...      .....+..|..++..+..+  -.++.++..... .+..|+|
T Consensus       344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~--~~i~~l~~~~~~-~~~~~lV  420 (674)
T 3pfq_A          344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP--PFLTQLHSCFQT-MDRLYFV  420 (674)
T ss_dssp             EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCC--TTBCCEEEECBC-SSEEEEE
T ss_pred             EEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCC--CeEEEEEEEEEe-CCEEEEE
Confidence            345668999999999998643 3 588898642      1233445666665544332  235555554432 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|..+
T Consensus       421 ~E~~~gg~L  429 (674)
T 3pfq_A          421 MEYVNGGDL  429 (674)
T ss_dssp             EECCCSCBH
T ss_pred             EeCcCCCcH
Confidence            999998755

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=97.83  E-value=4.4e-05  Score=69.02  Aligned_cols=79  Identities=9%  Similarity=-0.087  Sum_probs=52.3

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      +-.-.+.++.|....||++...+ + .+++|+....      ....+..|..+++.+..   -.+++++..... .+..+
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~  117 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH---QHVVGFHGFFED-NDFVF  117 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEec-CCeEE
Confidence            34456778889999999998753 3 6788886431      12345567776666532   245666655433 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|..+
T Consensus       118 lv~e~~~~~~L  128 (335)
T 2owb_A          118 VVLELCRRRSL  128 (335)
T ss_dssp             EEECCCTTCBH
T ss_pred             EEEecCCCCCH
Confidence            99999998654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.83  E-value=0.00021  Score=63.98  Aligned_cols=78  Identities=6%  Similarity=-0.066  Sum_probs=50.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecc-------cCC
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA-------LPT  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~-------~~~  117 (326)
                      +..-.+.++.|....||+....  +..+++|......   ...+..|...+..+..+  -.+.+++....       ...
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h--~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH--PNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTS--TTBCCEEEEEEECTTTSTTSS
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccC--CChhhccccccccccccccCC
Confidence            3455667888999999999863  3478999764321   23456788888888643  23455554331       112


Q ss_pred             CceEEEEeeecC
Q 020393          118 GGSYIIMEFIEF  129 (326)
Q Consensus       118 ~~~~~v~e~l~G  129 (326)
                      +..+++|++++|
T Consensus       107 ~~~~lv~e~~~g  118 (337)
T 3ll6_A          107 AEFLLLTELCKG  118 (337)
T ss_dssp             EEEEEEEECCSE
T ss_pred             ceEEEEEEecCC
Confidence            457999999976

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=97.83  E-value=4.7e-05  Score=69.34  Aligned_cols=77  Identities=10%  Similarity=0.084  Sum_probs=49.3

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .-.+.++.|....||+..... + .+++|+.... ....+..|..+++.|..   -.+++++..... .+..+++||+++
T Consensus        56 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~lv~e~~~  131 (349)
T 2w4o_A           56 EVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSH---PNIIKLKEIFET-PTEISLVLELVT  131 (349)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCC---TTBCCEEEEEEC-SSEEEEEECCCC
T ss_pred             EEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCC---CCCcceeeeEec-CCeEEEEEEeCC
Confidence            345678889999999998753 3 6888987542 34456778888887753   245666655433 467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus       132 ~~~L  135 (349)
T 2w4o_A          132 GGEL  135 (349)
T ss_dssp             SCBH
T ss_pred             CCCH
Confidence            8654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=97.83  E-value=0.00018  Score=63.73  Aligned_cols=78  Identities=17%  Similarity=0.087  Sum_probs=53.3

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -..++.++.|..+.||+....  +..+++|+....    ....+..|..+++.+..   -.+++++..... .+..+++|
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   99 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS---PYVTKYYGSYLK-DTKLWIIM   99 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEec-CCeEEEEE
Confidence            455778888999999998753  337889987532    22446677777766632   345666654433 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus       100 e~~~~~~L  107 (303)
T 3a7i_A          100 EYLGGGSA  107 (303)
T ss_dssp             ECCTTEEH
T ss_pred             EeCCCCcH
Confidence            99998643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.83  E-value=0.00014  Score=66.12  Aligned_cols=91  Identities=13%  Similarity=0.058  Sum_probs=55.3

Q ss_pred             hhHHHHHHhc-CCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC---Cc-----------chHHHHHHHHHHHH
Q 020393           36 DPIREWILSE-GKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI---GP-----------SMFEGEALGLGAMY   99 (326)
Q Consensus        36 ~~i~~~l~~~-~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~---~~-----------~~~~~E~~~l~~L~   99 (326)
                      ++.+..+.+. .....-.-.+.++.|..+.||+....++ .+++|.....   ..           ..+..|..+++.+.
T Consensus         8 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   87 (362)
T 3pg1_A            8 AAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH   87 (362)
T ss_dssp             HHHHHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC
Confidence            3344444443 1222455567788999999999976555 6888976431   11           34567888888775


Q ss_pred             hcCCCCCcceeeeccc---C-CCceEEEEeeecC
Q 020393          100 ETRTIRAPRPFKVGAL---P-TGGSYIIMEFIEF  129 (326)
Q Consensus       100 ~~~~~~vP~~~~~~~~---~-~~~~~~v~e~l~G  129 (326)
                      .   -.+.+++.....   . ....+++||+++|
T Consensus        88 h---~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~  118 (362)
T 3pg1_A           88 H---PNILGLRDIFVHFEEPAMHKLYLVTELMRT  118 (362)
T ss_dssp             C---TTBCCCSEEEEECCTTTCCEEEEEEECCSE
T ss_pred             C---cCccceeeeEEeccCCCcceEEEEEccCCC
Confidence            3   223444433211   1 2467999999987

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=97.82  E-value=0.00013  Score=66.33  Aligned_cols=76  Identities=16%  Similarity=-0.014  Sum_probs=53.1

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      -.+.++.|....||++... ++ .|++|+...... ....|.+++..+..+  -.+++++..... .+..|+|||+++|.
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~h--p~iv~~~~~~~~-~~~~~lv~E~~~gg  101 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQH--PNIITLKDVYDD-GKYVYVVTELMKGG  101 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTS--TTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCC--CCcCeEEEEEEc-CCEEEEEEeCCCCC
Confidence            3467888999999999864 23 789998765322 345788888777544  245666655433 46789999999986


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus       102 ~L  103 (342)
T 2qr7_A          102 EL  103 (342)
T ss_dssp             BH
T ss_pred             cH
Confidence            54

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.82  E-value=9.6e-05  Score=66.53  Aligned_cols=77  Identities=13%  Similarity=0.063  Sum_probs=53.3

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .-.+.++.|....||++...  +..+++|.....         ....+..|..+++.|..   -.+++++..... .+..
T Consensus        14 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~   89 (326)
T 2y0a_A           14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH---PNVITLHEVYEN-KTDV   89 (326)
T ss_dssp             EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEE
T ss_pred             EeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEE
Confidence            34567888999999999864  336888876421         12446788888887753   235666655433 4688


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus        90 ~lv~e~~~~~~L  101 (326)
T 2y0a_A           90 ILILELVAGGEL  101 (326)
T ss_dssp             EEEEECCCSCBH
T ss_pred             EEEEEcCCCCCH
Confidence            999999998654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=97.82  E-value=4.2e-05  Score=67.39  Aligned_cols=77  Identities=21%  Similarity=0.105  Sum_probs=53.0

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-.+.++.|..+.||++.... + .+++|.....    ....+..|.++++.+..   -.+++++..... .+..+++||
T Consensus        25 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e  100 (285)
T 3is5_A           25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH---PNIIKIFEVFED-YHNMYIVME  100 (285)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             eecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCC---chHHhHHHheec-CCeEEEEEE
Confidence            345678889999999998643 3 7888876431    23456778887777642   345666655433 467899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus       101 ~~~~~~L  107 (285)
T 3is5_A          101 TCEGGEL  107 (285)
T ss_dssp             CCSCCBH
T ss_pred             eCCCCcH
Confidence            9998654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.81  E-value=6.3e-05  Score=67.94  Aligned_cols=76  Identities=12%  Similarity=0.016  Sum_probs=52.8

Q ss_pred             eEeEeCCccccceEEEEeCC-c-cEEEEecCC--------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           53 KICPVGGGCINLASRYGTDA-G-SFFVKTNRS--------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~--------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.+.++.|..+.||+..... + .+++|+...        .....+..|..+++.+..   -.+++++..... .+..++
T Consensus        30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~l  105 (345)
T 3hko_A           30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH---PNIARLYEVYED-EQYICL  105 (345)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCC---CCcceeehhhcc-CCeEEE
Confidence            34668888899999997643 3 688897632        122456678888887742   346666665443 567899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      |||+++|.++
T Consensus       106 v~e~~~gg~L  115 (345)
T 3hko_A          106 VMELCHGGHL  115 (345)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=97.81  E-value=7.9e-05  Score=72.17  Aligned_cols=78  Identities=12%  Similarity=-0.032  Sum_probs=52.7

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ..-++.++.|..+.||++... ++ .|.+|....      .....+..|..+++.+..   -.+.+++..... .+..|+
T Consensus       187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~h---p~Iv~l~~~~~~-~~~l~l  262 (543)
T 3c4z_A          187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS---RFIVSLAYAFET-KTDLCL  262 (543)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCC---CCEeeEEEEEee-CCEEEE
Confidence            345667899999999999874 33 688898642      122345678888777642   234555554332 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|+++
T Consensus       263 VmE~~~gg~L  272 (543)
T 3c4z_A          263 VMTIMNGGDI  272 (543)
T ss_dssp             EECCCTTCBH
T ss_pred             EEEeccCCCH
Confidence            9999999765

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=97.81  E-value=9e-05  Score=65.85  Aligned_cols=75  Identities=13%  Similarity=0.090  Sum_probs=51.4

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.++.|..+.||++.... + .+++|......     ...+..|..+++.+..   -.+++++..... .+..+++|
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   81 (311)
T 4agu_A            6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH---PNLVNLLEVFRR-KRRLHLVF   81 (311)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCC---CCccchhheeec-CCeEEEEE
Confidence            345678889999999998743 3 68889765421     2334567777777753   245666665433 56789999


Q ss_pred             eeecCC
Q 020393          125 EFIEFG  130 (326)
Q Consensus       125 e~l~G~  130 (326)
                      |+++|.
T Consensus        82 e~~~~~   87 (311)
T 4agu_A           82 EYCDHT   87 (311)
T ss_dssp             ECCSEE
T ss_pred             EeCCCc
Confidence            999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=97.81  E-value=7.1e-05  Score=65.69  Aligned_cols=78  Identities=13%  Similarity=-0.003  Sum_probs=52.7

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-.+.++.|..+.||+..... + .+++|....      .....+..|.++++.+..   -.+++++..... .+..++
T Consensus        16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   91 (284)
T 2vgo_A           16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH---PNILRMYNYFHD-RKRIYL   91 (284)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCC---CCEeeEEEEEEc-CCEEEE
Confidence            4446678888999999998753 3 688898642      112446678877776642   235666655433 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus        92 v~e~~~~~~L  101 (284)
T 2vgo_A           92 MLEFAPRGEL  101 (284)
T ss_dssp             EECCCTTEEH
T ss_pred             EEEeCCCCcH
Confidence            9999988644

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=97.80  E-value=0.00014  Score=65.21  Aligned_cols=76  Identities=14%  Similarity=0.111  Sum_probs=52.5

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      -.+.++.|....||++... ++ .+++|.....         ....+..|..+++.+..   -.+++++..... .+..+
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~   91 (321)
T 2a2a_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH---HNVITLHDVYEN-RTDVV   91 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCC---CCcceEEEEEec-CCEEE
Confidence            3466888899999999864 23 6888876431         12346788888887753   245666655433 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|.++
T Consensus        92 lv~e~~~~~~L  102 (321)
T 2a2a_A           92 LILELVSGGEL  102 (321)
T ss_dssp             EEECCCCSCBH
T ss_pred             EEEEcCCCCcH
Confidence            99999998654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=97.79  E-value=0.00015  Score=65.21  Aligned_cols=78  Identities=14%  Similarity=0.154  Sum_probs=53.3

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      +-.-++.++.|..+.||++.... + .+++|......     ...+..|..+++.+..   -.+++++..... .+..++
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~l  101 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH---ENLVNLLEVCKK-KKRWYL  101 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCC---CCEeeEEEEeec-CCEEEE
Confidence            34556778999999999998753 3 68889764321     1234567777777753   346666665443 567899


Q ss_pred             EEeeecCCC
Q 020393          123 IMEFIEFGS  131 (326)
Q Consensus       123 v~e~l~G~~  131 (326)
                      +||+++|..
T Consensus       102 v~e~~~~~~  110 (331)
T 4aaa_A          102 VFEFVDHTI  110 (331)
T ss_dssp             EEECCSEEH
T ss_pred             EEecCCcch
Confidence            999999753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=97.79  E-value=9e-05  Score=70.75  Aligned_cols=77  Identities=10%  Similarity=-0.033  Sum_probs=53.1

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..-.+.++.|....||+....  +..+++|+... .....+..|.++++.|...  -.+|.+...+.. .+..+++||++
T Consensus         9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~--~~i~~i~~~~~~-~~~~~lvme~~   85 (483)
T 3sv0_A            9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGG--TGIPNVRWFGVE-GDYNVLVMDLL   85 (483)
T ss_dssp             EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTS--TTCCCEEEEEEE-TTEEEEEEECC
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCC--CCCCeEEEEEee-CCEEEEEEECC
Confidence            344566888999999999853  34789998653 2234577899999988764  334555544432 46789999999


Q ss_pred             cCCC
Q 020393          128 EFGS  131 (326)
Q Consensus       128 ~G~~  131 (326)
                       |..
T Consensus        86 -g~s   88 (483)
T 3sv0_A           86 -GPS   88 (483)
T ss_dssp             -CCB
T ss_pred             -CCC
Confidence             543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=97.79  E-value=0.00018  Score=63.40  Aligned_cols=75  Identities=17%  Similarity=0.080  Sum_probs=49.1

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.++.|..+.||+..... + .+++|.....  .   ...+..|..+++.+..   -.+.+++..... ++..+++|
T Consensus         5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~   80 (292)
T 3o0g_A            5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH---KNIVRLHDVLHS-DKKLTLVF   80 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCC---CCEeeEEeEEEe-CCEEEEEE
Confidence            345678889999999998743 3 6888987532  1   1334567766665542   235556554433 56889999


Q ss_pred             eeecCC
Q 020393          125 EFIEFG  130 (326)
Q Consensus       125 e~l~G~  130 (326)
                      |+++|.
T Consensus        81 e~~~~~   86 (292)
T 3o0g_A           81 EFCDQD   86 (292)
T ss_dssp             ECCSEE
T ss_pred             ecCCCC
Confidence            999863

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.78  E-value=0.0001  Score=69.52  Aligned_cols=76  Identities=17%  Similarity=0.157  Sum_probs=50.6

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -.+.++.|..+.||+.... ++ .+.+|+.....     ...+..|..+++.|..   -.+.+++..... ++..+++||
T Consensus        15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~~-~~~~~lv~E   90 (444)
T 3soa_A           15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH---PNIVRLHDSISE-EGHHYLIFD   90 (444)
T ss_dssp             EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCB---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---cCCCeEEEEEEE-CCEEEEEEE
Confidence            3567888999999998753 33 67888764321     2346678888887743   235566655433 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|+.+
T Consensus        91 ~~~gg~L   97 (444)
T 3soa_A           91 LVTGGEL   97 (444)
T ss_dssp             CCBCCBH
T ss_pred             eCCCCCH
Confidence            9998754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=97.78  E-value=9.4e-05  Score=69.88  Aligned_cols=77  Identities=19%  Similarity=0.230  Sum_probs=55.7

Q ss_pred             eeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ..-.+.++.|....||+....++ .+++|.....  ....+..|+.+++.|..   -.+.+++....  ++..++|||++
T Consensus       186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~--~~~~~iv~e~~  260 (452)
T 1fmk_A          186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYM  260 (452)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEECCC
T ss_pred             ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCC---CCEeeEEEEEc--CCceEEEehhh
Confidence            34456688899999999987654 6889987653  23457789988888853   23566665543  36789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus       261 ~~gsL  265 (452)
T 1fmk_A          261 SKGSL  265 (452)
T ss_dssp             TTCBH
T ss_pred             cCCCH
Confidence            98755

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=97.78  E-value=7.6e-05  Score=65.35  Aligned_cols=78  Identities=15%  Similarity=0.120  Sum_probs=53.1

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-.+.++.|....||+..... + .+++|+....  .   ...+..|..+++.+..   -.+++++..... .+..+++
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~~v   83 (284)
T 3kk8_A            8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH---PNIVRLHDSIQE-ESFHYLV   83 (284)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCC---CCcCeEEEEEEc-CCEEEEE
Confidence            4456678889999999987642 3 7888987432  1   2345678887777742   346666665433 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        84 ~e~~~~~~l   92 (284)
T 3kk8_A           84 FDLVTGGEL   92 (284)
T ss_dssp             ECCCCSCBH
T ss_pred             EecCCCCCH
Confidence            999998654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=97.78  E-value=5.1e-05  Score=69.15  Aligned_cols=76  Identities=16%  Similarity=0.139  Sum_probs=53.4

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCC--------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRS--------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~--------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.+.++.|....||+....  +..+++|+...        .....+..|..+++.|..   -.+++++..... .+..|+
T Consensus        28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~~~~l  103 (351)
T 3c0i_A           28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH---PHIVELLETYSS-DGMLYM  103 (351)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEEE
Confidence            3567888999999999764  33788897631        123457789988887742   246666655433 568899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      |||+++|.++
T Consensus       104 v~e~~~g~~L  113 (351)
T 3c0i_A          104 VFEFMDGADL  113 (351)
T ss_dssp             EEECCSSCBH
T ss_pred             EEeCCCCCCH
Confidence            9999998755

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.78  E-value=0.00013  Score=63.81  Aligned_cols=77  Identities=12%  Similarity=0.060  Sum_probs=53.2

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .-++.++.|....||++...  +..+++|+....         ....+..|..+++.+..   -.+++++..... .+..
T Consensus         8 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~   83 (283)
T 3bhy_A            8 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH---PNIITLHDIFEN-KTDV   83 (283)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEE
T ss_pred             hhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCC---CCeeehhheecC-CCeE
Confidence            34567888899999999875  337888876421         13446788888887753   235666655433 4678


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus        84 ~lv~e~~~~~~L   95 (283)
T 3bhy_A           84 VLILELVSGGEL   95 (283)
T ss_dssp             EEEEECCCSCBH
T ss_pred             EEEEeecCCCcH
Confidence            999999998654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=97.77  E-value=7e-05  Score=65.42  Aligned_cols=78  Identities=10%  Similarity=-0.036  Sum_probs=51.1

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ..-.+.++.|..+.+|+....  +..+++|.....      ....+..|..+++.+..   -.+++++..... .+..++
T Consensus        13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~l   88 (278)
T 3cok_A           13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH---PSILELYNYFED-SNYVYL   88 (278)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCC---CCeEeEEEEEcc-CCeEEE
Confidence            344567888889999999863  337889987431      12345667766655532   235666655433 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|..+
T Consensus        89 v~e~~~~~~L   98 (278)
T 3cok_A           89 VLEMCHNGEM   98 (278)
T ss_dssp             EEECCTTEEH
T ss_pred             EEecCCCCcH
Confidence            9999988643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=97.77  E-value=7.3e-05  Score=65.96  Aligned_cols=79  Identities=9%  Similarity=-0.087  Sum_probs=52.2

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      +-.-.+.++.|..+.||++...+ + .+++|+....      ....+..|..+++.+..   -.+++++..... .+..+
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~   91 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH---QHVVGFHGFFED-NDFVF   91 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCC---CCEeeeeeeecc-CCEEE
Confidence            34456778889999999998753 3 6788876431      12345567766665532   245666655433 46789


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|..+
T Consensus        92 lv~e~~~~~~L  102 (294)
T 2rku_A           92 VVLELCRRRSL  102 (294)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEecCCCCCH
Confidence            99999998644

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.76  E-value=8.6e-05  Score=68.32  Aligned_cols=79  Identities=24%  Similarity=0.121  Sum_probs=52.0

Q ss_pred             ceeeEeEeCCccccceEEEEeC----Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           50 HITKICPVGGGCINLASRYGTD----AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ...-.+.++.|....||+....    .+ .+++|......    ...+..|..+++.+..   -.+++++..... .+..
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~  121 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH---PNIIRLEGVVTK-SKPV  121 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSSC
T ss_pred             hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCce
Confidence            3444567888999999998753    22 68999876421    2335567777666632   246666665433 4678


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      ++||||++|.++
T Consensus       122 ~lv~e~~~~~sL  133 (373)
T 2qol_A          122 MIVTEYMENGSL  133 (373)
T ss_dssp             EEEEECCTTCBH
T ss_pred             EEEEeCCCCCcH
Confidence            999999998754

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.76  E-value=6.5e-05  Score=66.99  Aligned_cols=80  Identities=13%  Similarity=0.037  Sum_probs=49.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeeccc---CCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~~~~~~  121 (326)
                      +-.-++.++.|..+.||++...  +..+++|.....   ....+..|..+++.+..   -.+++++.....   ..+..+
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH---PNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCC---TTBCCCCEEEEEEETTEEEEE
T ss_pred             EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCC---CCeeeEEEEEEeccCCCceeE
Confidence            3445677888999999999862  347888976432   13445678777766632   235555544321   124779


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+++|.++
T Consensus       107 lv~e~~~~~~L  117 (317)
T 2buj_A          107 LLLPFFKRGTL  117 (317)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEEeCCCCcH
Confidence            99999998754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.76  E-value=7.5e-05  Score=72.21  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .-.+.++.|....||+....++ .+++|.....  ....+..|+.+++.|..   -.+.+++....  ++..++|||+++
T Consensus       270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~--~~~~~lv~e~~~  344 (535)
T 2h8h_A          270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH---EKLVQLYAVVS--EEPIYIVTEYMS  344 (535)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEECCCT
T ss_pred             hhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCC---CCEeeEEEEEe--eccceEeeehhc
Confidence            3355688899999999987654 6889987643  23457789988888853   23556665543  367899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus       345 ~gsL  348 (535)
T 2h8h_A          345 KGSL  348 (535)
T ss_dssp             TEEH
T ss_pred             CCcH
Confidence            8654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.76  E-value=0.00017  Score=63.16  Aligned_cols=79  Identities=15%  Similarity=0.035  Sum_probs=44.7

Q ss_pred             ceeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCCcc--hHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           50 HITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPS--MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~--~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +..-++.++.|..+.||++... + ..+++|........  ..+...+....+.....-.+++++..... .+..+++||
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv~e   86 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWICME   86 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEEEE
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEEEe
Confidence            4455677899999999999863 3 37899987643211  11111111112222111235555554432 568899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      +++|
T Consensus        87 ~~~~   90 (290)
T 3fme_A           87 LMDT   90 (290)
T ss_dssp             CCSE
T ss_pred             hhcc
Confidence            9986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.76  E-value=0.00016  Score=65.48  Aligned_cols=76  Identities=12%  Similarity=0.098  Sum_probs=53.0

Q ss_pred             eeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -.-++.++.|..+.||++...++ .+++|.....  .   ...+..|..+++.|..+ ...+++++..... .+..+++|
T Consensus        11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~~iv~~~~~~~~-~~~~~lv~   88 (343)
T 3dbq_A           11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH-SDKIIRLYDYEIT-DQYIYMVM   88 (343)
T ss_dssp             EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhc-CCceEEEeeeEee-CCEEEEEE
Confidence            34567789999999999987655 6888876432  1   23467899999888753 2346677765543 56889999


Q ss_pred             eeec
Q 020393          125 EFIE  128 (326)
Q Consensus       125 e~l~  128 (326)
                      |+..
T Consensus        89 e~~~   92 (343)
T 3dbq_A           89 ECGN   92 (343)
T ss_dssp             CCCS
T ss_pred             eCCC
Confidence            9543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.76  E-value=3.6e-05  Score=69.14  Aligned_cols=78  Identities=15%  Similarity=0.114  Sum_probs=51.1

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-c--EEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-S--FFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~--~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-.+.++.|..+.||+.... ++ .  +++|....    .....+..|.++++.+..+  -.+++++..... .+..+++
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h--p~iv~~~~~~~~-~~~~~lv  104 (327)
T 1fvr_A           28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLA  104 (327)
T ss_dssp             EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC--TTBCCEEEEEEE-TTEEEEE
T ss_pred             cceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCC--Cchhhhceeeee-CCceEEE
Confidence            44566888999999998753 33 3  36776543    1234567788877766332  236666665433 5688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus       105 ~e~~~~~~L  113 (327)
T 1fvr_A          105 IEYAPHGNL  113 (327)
T ss_dssp             ECCCTTCBH
T ss_pred             EecCCCCCH
Confidence            999998765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.76  E-value=0.00011  Score=64.75  Aligned_cols=80  Identities=20%  Similarity=0.174  Sum_probs=52.5

Q ss_pred             ceeeEeEeCCccccceEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCc
Q 020393           50 HITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~-----~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~  119 (326)
                      +..-++.++.|....||+...     .++ .+++|......   ...+..|..+++.+..   -.+.+++...... ...
T Consensus        11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A           11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECHHHHTS
T ss_pred             HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEecCCCCc
Confidence            455677889999999999973     123 68889876532   2345678877776642   2345555432211 245


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus        88 ~~lv~e~~~~~~L  100 (295)
T 3ugc_A           88 LKLIMEYLPYGSL  100 (295)
T ss_dssp             CEEEEECCTTCBH
T ss_pred             eEEEEEeCCCCCH
Confidence            7999999998754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=97.75  E-value=9.5e-05  Score=67.80  Aligned_cols=77  Identities=13%  Similarity=0.046  Sum_probs=52.2

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      .-.+.++.|..+.||++...  +..|.+|+....         ....+..|..+++.+..   -.+++++..... .+..
T Consensus        15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~~-~~~~   90 (361)
T 2yab_A           15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH---PNIITLHDVYEN-RTDV   90 (361)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEE
T ss_pred             EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCC---cCCCcEEEEEEe-CCEE
Confidence            33567888999999999864  336888876431         12346778877776642   235566655433 4688


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      ++|||+++|..+
T Consensus        91 ~lv~e~~~gg~L  102 (361)
T 2yab_A           91 VLILELVSGGEL  102 (361)
T ss_dssp             EEEEECCCSCBH
T ss_pred             EEEEEcCCCCcH
Confidence            999999998654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=97.75  E-value=0.00025  Score=63.60  Aligned_cols=80  Identities=20%  Similarity=0.174  Sum_probs=52.1

Q ss_pred             ceeeEeEeCCccccceEEEEe-----CCc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCc
Q 020393           50 HITKICPVGGGCINLASRYGT-----DAG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~-----~~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~  119 (326)
                      ...-++.++.|..+.||++..     .++ .+++|......   ...+..|..+++.+..   -.+++++...... ...
T Consensus        42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH---DNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCC---TTBCCEEEEECC----C
T ss_pred             HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEEecCCCc
Confidence            455677889999999999973     233 68889876532   2346678877776642   2355555543221 246


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus       119 ~~lv~e~~~~~~L  131 (326)
T 2w1i_A          119 LKLIMEYLPYGSL  131 (326)
T ss_dssp             CEEEECCCTTCBH
T ss_pred             eEEEEECCCCCCH
Confidence            7999999998754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.75  E-value=0.00012  Score=67.03  Aligned_cols=77  Identities=14%  Similarity=0.070  Sum_probs=52.9

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-.+.++.|....||++...  +..+++|+.....     ...+..|..+++.|..   -.+++++..... .+..|+||
T Consensus        32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~lv~  107 (362)
T 2bdw_A           32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH---PNIVRLHDSIQE-ESFHYLVF  107 (362)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEE
Confidence            34566888999999998764  3378889875321     2346678888877742   235666655433 46889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus       108 e~~~gg~L  115 (362)
T 2bdw_A          108 DLVTGGEL  115 (362)
T ss_dssp             CCCCSCBH
T ss_pred             ecCCCCCH
Confidence            99998654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=97.75  E-value=4.9e-05  Score=66.41  Aligned_cols=79  Identities=18%  Similarity=0.145  Sum_probs=51.9

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~  122 (326)
                      -.-++.++.|..+.+|++... ++ .+++|......     ...+..|...++.+..   -.+++++...... .+..++
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH---PNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEEGGGTEEEE
T ss_pred             eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCC---CCCCeEEEEEecCCCceEEE
Confidence            345677888899999999874 33 68888875321     2345678877777742   2355565532111 457899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|.++
T Consensus        85 v~e~~~~~~L   94 (279)
T 2w5a_A           85 VMEYCEGGDL   94 (279)
T ss_dssp             EEECCTTEEH
T ss_pred             EEeCCCCCCH
Confidence            9999998654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=97.74  E-value=0.00034  Score=61.26  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=53.2

Q ss_pred             ceeeEeEeCCccccceEEEEeCC---------ccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           50 HITKICPVGGGCINLASRYGTDA---------GSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~---------~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      +..-.+.++.|....||+.....         ..+++|......   ...+..|..+++.+..   -.+++++..... .
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~   84 (289)
T 4fvq_A            9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH---KHLVLNYGVCVC-G   84 (289)
T ss_dssp             GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCC---TTBCCEEEEECC-T
T ss_pred             HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEEe-C
Confidence            44556778889999999986532         248899875422   2345667777766642   245666665433 4


Q ss_pred             CceEEEEeeecCCCC
Q 020393          118 GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~  132 (326)
                      +..+++||+++|.++
T Consensus        85 ~~~~lv~e~~~~~~L   99 (289)
T 4fvq_A           85 DENILVQEFVKFGSL   99 (289)
T ss_dssp             TCCEEEEECCTTCBH
T ss_pred             CCCEEEEECCCCCCH
Confidence            678999999998654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.74  E-value=0.00012  Score=64.94  Aligned_cols=79  Identities=14%  Similarity=0.104  Sum_probs=52.3

Q ss_pred             ceeeEeEeCCccccceEEEEeC------C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD------A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-.+.++.|..+.||+.+..      + ..+++|......    ...+..|..+++.+..   -.+.+++..... .+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~   99 (314)
T 2ivs_A           24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH---PHVIKLYGACSQ-DG   99 (314)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SS
T ss_pred             heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC---CceeeEEEEEec-CC
Confidence            4555677888999999999752      2 368889886432    1335567766665532   235555554332 56


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       100 ~~~lv~e~~~~~~L  113 (314)
T 2ivs_A          100 PLLLIVEYAKYGSL  113 (314)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceEEEEeecCCCCH
Confidence            88999999998755

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=97.74  E-value=0.0002  Score=64.00  Aligned_cols=79  Identities=15%  Similarity=0.115  Sum_probs=52.2

Q ss_pred             eeeEeEeCCccccceEEEEe--CCc-cEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeeccc----CCC
Q 020393           51 ITKICPVGGGCINLASRYGT--DAG-SFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTG  118 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~--~~~-~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~----~~~  118 (326)
                      -.-++.++.|....||++..  .++ .+++|....     .....+..|..+++.+....--.+++++.....    ..+
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   92 (326)
T 1blx_A           13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   92 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence            44567788899999999986  344 577887642     123456789999988864222345666654321    135


Q ss_pred             ceEEEEeeecC
Q 020393          119 GSYIIMEFIEF  129 (326)
Q Consensus       119 ~~~~v~e~l~G  129 (326)
                      ..+++||+++|
T Consensus        93 ~~~lv~e~~~~  103 (326)
T 1blx_A           93 KLTLVFEHVDQ  103 (326)
T ss_dssp             EEEEEEECCSC
T ss_pred             eEEEEEecCCC
Confidence            78999999986

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=97.74  E-value=8e-05  Score=64.94  Aligned_cols=77  Identities=13%  Similarity=0.056  Sum_probs=51.9

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-.+.++.|....+|+....  +..+++|....      .....+..|...++.+..   -.+++++..... .+..+++
T Consensus        14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   89 (276)
T 2h6d_A           14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH---PHIIKLYQVIST-PTDFFMV   89 (276)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCC---CCEeEEEEEEec-CCeEEEE
Confidence            34567888899999999864  34789998642      122345677777666542   245666655433 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        90 ~e~~~~~~L   98 (276)
T 2h6d_A           90 MEYVSGGEL   98 (276)
T ss_dssp             EECCCSCBH
T ss_pred             EeccCCCcH
Confidence            999998654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=97.74  E-value=0.00016  Score=63.65  Aligned_cols=77  Identities=13%  Similarity=0.112  Sum_probs=49.0

Q ss_pred             eEeEeCCccccceEEEEeC-Cc----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           53 KICPVGGGCINLASRYGTD-AG----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ..+.++.|..+.||+.... ++    .+++|......    ...+..|..+++.+..   -.+.+++......++..+++
T Consensus        25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH---PNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC---TTBCCCCEEECCSSSCCEEE
T ss_pred             cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEecCCCCcEEE
Confidence            3467899999999998742 22    58888876422    2335567777666632   23455555443324456999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |+++.|.++
T Consensus       102 ~e~~~~~~L  110 (298)
T 3pls_A          102 LPYMCHGDL  110 (298)
T ss_dssp             ECCCTTCBH
T ss_pred             EecccCCCH
Confidence            999988654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=97.74  E-value=0.00023  Score=63.72  Aligned_cols=78  Identities=14%  Similarity=0.118  Sum_probs=52.8

Q ss_pred             ceeeEeEeCCccccceEEEEe--CCc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---CcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGT--DAG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~--~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~---vP~~~~~~~~~~~~~~  121 (326)
                      +-.-++.++.|..+.||+...  .++ .+++|+.....  ...+..|..+++.+.......   +++++..... .+..+
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~~   93 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHIC   93 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcEE
Confidence            344566788899999999875  233 68889886432  244678999999887643333   4455544332 46889


Q ss_pred             EEEeeec
Q 020393          122 IIMEFIE  128 (326)
Q Consensus       122 ~v~e~l~  128 (326)
                      ++||++.
T Consensus        94 lv~e~~~  100 (339)
T 1z57_A           94 IVFELLG  100 (339)
T ss_dssp             EEEECCC
T ss_pred             EEEcCCC
Confidence            9999993

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=97.74  E-value=5.4e-05  Score=67.82  Aligned_cols=74  Identities=15%  Similarity=0.119  Sum_probs=41.8

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|....||+.... ++ .+++|.....    ....+..|..+++.+..   -.+.+++..... ++..++|||
T Consensus         8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~-~~~~~lv~e   83 (317)
T 2pmi_A            8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH---ENIVRLYDVIHT-ENKLTLVFE   83 (317)
T ss_dssp             -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCB---TTBCCEEEEECC-TTEEEEEEE
T ss_pred             eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCC---CCcceEEEEEEE-CCeEEEEEE
Confidence            34567888999999998754 23 6888876431    23446678877766642   235566655433 568899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      +++|
T Consensus        84 ~~~~   87 (317)
T 2pmi_A           84 FMDN   87 (317)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=97.73  E-value=4e-05  Score=68.94  Aligned_cols=74  Identities=12%  Similarity=0.070  Sum_probs=48.9

Q ss_pred             eeEeEeCCccccceEEEEeC-C-ccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|..+.||+.... + ..+++|......    ...+..|..+++.+..   -.+++++..... .+..+++||
T Consensus         5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e   80 (324)
T 3mtl_A            5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH---ANIVTLHDIIHT-EKSLTLVFE   80 (324)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCC---TTBCCEEEEEEC-SSCEEEEEE
T ss_pred             EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCC---CCCCeeeeEEee-CCEEEEEec
Confidence            34677888999999999874 3 368889775321    1223357777666642   245666655433 568899999


Q ss_pred             eecC
Q 020393          126 FIEF  129 (326)
Q Consensus       126 ~l~G  129 (326)
                      +++|
T Consensus        81 ~~~~   84 (324)
T 3mtl_A           81 YLDK   84 (324)
T ss_dssp             CCSE
T ss_pred             cccc
Confidence            9986

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.73  E-value=0.00011  Score=71.72  Aligned_cols=75  Identities=15%  Similarity=0.117  Sum_probs=51.5

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .+.+|.|.+..||+.... +| .|.+|+-...   ....+..|..+|+.|..   -.+.+++..... ++..|++|||++
T Consensus       162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~h---pnIv~l~~~~~~-~~~~~iv~E~~~  237 (573)
T 3uto_A          162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH---PTLVNLHDAFED-DNEMVMIYEFMS  237 (573)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCC---TTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEEEEEeecC
Confidence            456899999999998763 34 6778865432   23456789888887753   124455544333 578899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus       238 gg~L  241 (573)
T 3uto_A          238 GGEL  241 (573)
T ss_dssp             CCBH
T ss_pred             CCcH
Confidence            9754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=97.73  E-value=0.00021  Score=69.58  Aligned_cols=79  Identities=11%  Similarity=0.055  Sum_probs=54.2

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ...-++.++.|..+.||++... ++ .|.+|....      .....+..|..+++.+..   -.+.+++..... .+..+
T Consensus       185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~h---p~Iv~l~~~~~~-~~~l~  260 (576)
T 2acx_A          185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS---RFVVSLAYAYET-KDALC  260 (576)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEE
T ss_pred             ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCC---CCEeeEEEEEee-CCEEE
Confidence            3455677899999999999874 33 688897642      123445678888877743   235555554433 46889


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +||||++|+++
T Consensus       261 lVmEy~~gg~L  271 (576)
T 2acx_A          261 LVLTLMNGGDL  271 (576)
T ss_dssp             EEECCCCSCBH
T ss_pred             EEEEcCCCCcH
Confidence            99999998765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.72  E-value=0.00013  Score=68.97  Aligned_cols=76  Identities=21%  Similarity=0.124  Sum_probs=53.1

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .-.+.++.|....||+....++ .+.+|.....  ....+..|+.+++.|..   -.+.+++....  .+..++|||+++
T Consensus       191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~l~~~~~--~~~~~lv~e~~~  265 (454)
T 1qcf_A          191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH---DKLVKLHAVVT--KEPIYIITEFMA  265 (454)
T ss_dssp             EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEECCCT
T ss_pred             EEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCC---CCEeeEEEEEe--CCccEEEEeecC
Confidence            3456788999999999987654 7888987643  23456788887776642   23445554432  467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |.++
T Consensus       266 ~g~L  269 (454)
T 1qcf_A          266 KGSL  269 (454)
T ss_dssp             TCBH
T ss_pred             CCcH
Confidence            8755

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=97.72  E-value=0.00013  Score=66.04  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=51.3

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCC
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPT  117 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~  117 (326)
                      -.-++.++.|....||+.... ++ .+++|+....           ....+..|..+++.+..   -.+++++..... .
T Consensus        26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~Iv~~~~~~~~-~  101 (335)
T 3dls_A           26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH---ANIIKVLDIFEN-Q  101 (335)
T ss_dssp             EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC---TTBCCEEEEEEC-S
T ss_pred             eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC---CCEeeEEEEEee-C
Confidence            445677899999999999753 33 6888976532           12345678888877742   345666655433 4


Q ss_pred             CceEEEEeeecCC
Q 020393          118 GGSYIIMEFIEFG  130 (326)
Q Consensus       118 ~~~~~v~e~l~G~  130 (326)
                      +..+++||+..+.
T Consensus       102 ~~~~lv~e~~~~g  114 (335)
T 3dls_A          102 GFFQLVMEKHGSG  114 (335)
T ss_dssp             SEEEEEEECCTTS
T ss_pred             CEEEEEEEeCCCC
Confidence            6789999988654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.72  E-value=0.00018  Score=65.23  Aligned_cols=74  Identities=11%  Similarity=-0.000  Sum_probs=49.5

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCC--------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      .-++.++.|..+.||+....  +..+++|......        ...+..|..+++.+..   -.+++++..... .+..+
T Consensus        13 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~   88 (346)
T 1ua2_A           13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH---PNIIGLLDAFGH-KSNIS   88 (346)
T ss_dssp             CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC---TTBCCEEEEECC-TTCCE
T ss_pred             EEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCC---CCCCeEEEEEee-CCceE
Confidence            34566888999999999864  3368899875311        2345678888877742   245666655432 46889


Q ss_pred             EEEeeecC
Q 020393          122 IIMEFIEF  129 (326)
Q Consensus       122 ~v~e~l~G  129 (326)
                      ++||+++|
T Consensus        89 lv~e~~~~   96 (346)
T 1ua2_A           89 LVFDFMET   96 (346)
T ss_dssp             EEEECCSE
T ss_pred             EEEEcCCC
Confidence            99999987

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=97.72  E-value=9.4e-05  Score=68.19  Aligned_cols=78  Identities=12%  Similarity=0.098  Sum_probs=52.6

Q ss_pred             eeeEeEeCCc--cccceEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           51 ITKICPVGGG--CINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        51 v~~v~~l~~G--~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      -.-++.++.|  ....||+.... ++ .+++|.....  .   ...+..|..+++.+..   -.+.+++..... .+..+
T Consensus        27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~-~~~~~  102 (389)
T 3gni_B           27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH---PNIVPYRATFIA-DNELW  102 (389)
T ss_dssp             EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEE
T ss_pred             EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCC---CCCCcEeEEEEE-CCEEE
Confidence            4456678888  88899999875 33 6888987532  1   2345668888777753   235555554333 56889


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +|||+++|.++
T Consensus       103 lv~e~~~~~~L  113 (389)
T 3gni_B          103 VVTSFMAYGSA  113 (389)
T ss_dssp             EEEECCTTCBH
T ss_pred             EEEEccCCCCH
Confidence            99999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=97.72  E-value=0.00027  Score=65.00  Aligned_cols=77  Identities=10%  Similarity=-0.004  Sum_probs=51.6

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---CcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~---vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-.+.++.|....||+.... ++ .+++|+.....  ......|..+++.+.....+.   +.+++..... .+..++||
T Consensus        57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~  135 (382)
T 2vx3_A           57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVF  135 (382)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTEEEEEE
T ss_pred             EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCceEEEE
Confidence            44567889999999999764 33 68889886432  234567888888887542222   4444443322 46889999


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      |+++|
T Consensus       136 e~~~~  140 (382)
T 2vx3_A          136 EMLSY  140 (382)
T ss_dssp             ECCCC
T ss_pred             ecCCC
Confidence            99976

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.72  E-value=7.1e-05  Score=66.75  Aligned_cols=78  Identities=17%  Similarity=0.096  Sum_probs=51.0

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-.+.++.|....+|++... ++ .+++|+....   .   ...+..|...++.+..   -.+++++..... ++..++
T Consensus        36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---p~iv~~~~~~~~-~~~~~l  111 (309)
T 2h34_A           36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE---PHVVPIHDFGEI-DGQLYV  111 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCC---CCeeEEEEEEee-CCeEEE
Confidence            344566788889999999864 33 6889987532   1   1335567666655532   235556655433 568899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus       112 v~e~~~~~~L  121 (309)
T 2h34_A          112 DMRLINGVDL  121 (309)
T ss_dssp             EEECCCCEEH
T ss_pred             EEEecCCCCH
Confidence            9999998654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=97.72  E-value=0.00013  Score=64.97  Aligned_cols=79  Identities=18%  Similarity=0.063  Sum_probs=45.9

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCc------chHHHHHHHHHHHHhcCCCCCcceeeecccC---CCc
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGP------SMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~------~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~  119 (326)
                      -.-.+.++.|....||+.... ++ .+++|+......      ..+..|...++.+.   --.+++++......   ...
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN---HPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC---CTTBCCEEEEEEEEETTEEE
T ss_pred             EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC---CCCcceEEEeeeccCCCCcc
Confidence            344567888999999999853 33 789998865311      12334443333332   12344555443221   123


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .|+||||++|.++
T Consensus        91 ~~lv~e~~~g~~L  103 (311)
T 3ork_A           91 PYIVMEYVDGVTL  103 (311)
T ss_dssp             EEEEEECCCEEEH
T ss_pred             cEEEEecCCCCCH
Confidence            4999999998654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=97.72  E-value=9.6e-05  Score=68.11  Aligned_cols=79  Identities=13%  Similarity=0.052  Sum_probs=43.7

Q ss_pred             eeeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      ..-++.++.|....||++.... + .|.+|+.....      ...+..|..++  ++...--.+++++..... .+..|+
T Consensus        40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l--l~~~~hp~Iv~l~~~~~~-~~~~~l  116 (373)
T 2r5t_A           40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQT-ADKLYF  116 (373)
T ss_dssp             EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC--BCCCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH--HHhCCCCCCCCEEEEEEe-CCEEEE
Confidence            4556778999999999998743 3 68889875321      11112222211  111111124444444332 468899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|..+
T Consensus       117 v~E~~~gg~L  126 (373)
T 2r5t_A          117 VLDYINGGEL  126 (373)
T ss_dssp             EEECCCSCBH
T ss_pred             EEeCCCCCcH
Confidence            9999999754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=97.71  E-value=9.8e-05  Score=64.70  Aligned_cols=78  Identities=19%  Similarity=0.126  Sum_probs=51.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-----cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-----~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      +..-.+.++.|..+.||+......     .+.+|......    ...+..|...++.+..   -.+++++....  ++..
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~--~~~~   90 (281)
T 1mp8_A           16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH---PHIVKLIGVIT--ENPV   90 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEC--SSSC
T ss_pred             HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CccceEEEEEc--cCcc
Confidence            445567788999999999876321     47888875422    2335567766665532   23566665532  4678


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++||+++|.++
T Consensus        91 ~lv~e~~~~~~L  102 (281)
T 1mp8_A           91 WIIMELCTLGEL  102 (281)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEecCCCCCH
Confidence            999999988644

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=97.71  E-value=0.00023  Score=63.70  Aligned_cols=75  Identities=15%  Similarity=0.008  Sum_probs=50.3

Q ss_pred             eEeEeCCccccceEEEEeCC--ccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           53 KICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      -.+.++.|....||+.....  ..+++|+....           ....+..|.++++.+..   -.+.+++....  .+.
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~   88 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH---PCIIKIKNFFD--AED   88 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC---TTBCCEEEEEE--SSS
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC---CCCceEeeEEc--CCc
Confidence            35668888999999997643  37899986431           12346788888887742   23555655433  345


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .+++||+++|.++
T Consensus        89 ~~lv~e~~~~~~L  101 (322)
T 2ycf_A           89 YYIVLELMEGGEL  101 (322)
T ss_dssp             EEEEEECCTTEET
T ss_pred             eEEEEecCCCCcH
Confidence            8999999998755

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=97.70  E-value=0.00017  Score=65.42  Aligned_cols=78  Identities=8%  Similarity=-0.033  Sum_probs=53.3

Q ss_pred             eeEeEeCCccccceEEEEeCC----------ccEEEEecCCCCcchHHHHHHHHHHHHhc------------CCCCCcce
Q 020393           52 TKICPVGGGCINLASRYGTDA----------GSFFVKTNRSIGPSMFEGEALGLGAMYET------------RTIRAPRP  109 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~----------~~~vlK~~~~~~~~~~~~E~~~l~~L~~~------------~~~~vP~~  109 (326)
                      .-.+.++.|....||++....          ..+++|.....  ..+..|..+++.+...            ....+|++
T Consensus        45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~  122 (352)
T 2jii_A           45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC  122 (352)
T ss_dssp             EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred             EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence            345678889999999998642          37999998653  3467888888776421            12346667


Q ss_pred             eeecccCCCceEEEEeeecCCCC
Q 020393          110 FKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       110 ~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +......++..+++||++ |.++
T Consensus       123 ~~~~~~~~~~~~lv~e~~-~~~L  144 (352)
T 2jii_A          123 MGFGVHQDKYRFLVLPSL-GRSL  144 (352)
T ss_dssp             CEEEEETTTEEEEEEECC-CEEH
T ss_pred             hhccccCCcEEEEEecCC-CcCH
Confidence            766543356889999999 6544

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=97.70  E-value=7.4e-05  Score=67.82  Aligned_cols=73  Identities=11%  Similarity=-0.043  Sum_probs=49.6

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -.+.++.|..+.||+....  +..+++|+...      .....+..|..+++.+..   -.+++++..... .+..+++|
T Consensus        13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~-~~~~~lv~   88 (336)
T 3h4j_B           13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH---PHIIKLYDVITT-PTDIVMVI   88 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEE
Confidence            3567888999999999863  34788897642      123456778877766642   235666655443 46789999


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      ||+.|
T Consensus        89 E~~~g   93 (336)
T 3h4j_B           89 EYAGG   93 (336)
T ss_dssp             CCCCE
T ss_pred             ECCCC
Confidence            99955

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.69  E-value=0.00012  Score=64.44  Aligned_cols=72  Identities=15%  Similarity=0.130  Sum_probs=48.2

Q ss_pred             EeCCccccceEEEEeC---C-ccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGTD---A-GSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~---~-~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .++.|..+.||+....   . ..+++|+.....     ...+..|..+++.+..   -.+++++....  .+..+++||+
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~   98 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIVRMIGICE--AESWMLVMEM   98 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC---TTBCCEEEEEE--SSSEEEEEEC
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEC--CCCcEEEEEe
Confidence            6888999999998532   2 268899876421     2345677777776632   34566666543  4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        99 ~~~~~L  104 (291)
T 1xbb_A           99 AELGPL  104 (291)
T ss_dssp             CTTEEH
T ss_pred             CCCCCH
Confidence            998654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.68  E-value=0.00025  Score=64.23  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=50.6

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-------
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-------  116 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-------  116 (326)
                      -.-++.++.|..+.||+.... ++ .+++|.....     ....+..|..+++.+..   -.+++++......       
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH---ENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCC---TTBCCEEEEEEEC-------
T ss_pred             eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccC---CCcccHhheeeccccccccC
Confidence            345677899999999999873 33 7888976432     12345678888887753   2355565543221       


Q ss_pred             CCceEEEEeeecC
Q 020393          117 TGGSYIIMEFIEF  129 (326)
Q Consensus       117 ~~~~~~v~e~l~G  129 (326)
                      .+..++|||+++|
T Consensus        96 ~~~~~lv~e~~~~  108 (351)
T 3mi9_A           96 KGSIYLVFDFCEH  108 (351)
T ss_dssp             -CEEEEEEECCSE
T ss_pred             CceEEEEEeccCC
Confidence            3467999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.68  E-value=0.00016  Score=64.15  Aligned_cols=77  Identities=16%  Similarity=0.095  Sum_probs=52.3

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-.+.++.|..+.+|++...  +..+++|.....   ....+..|..+++.+..   -.+++++..... .+..+++||+
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~e~   87 (304)
T 2jam_A           12 IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH---ENIVTLEDIYES-TTHYYLVMQL   87 (304)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEECC
T ss_pred             eeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCC---CCeeehhhhccc-CCEEEEEEEc
Confidence            34567888999999999864  337888987532   23456788888887743   235556654432 4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus        88 ~~~~~L   93 (304)
T 2jam_A           88 VSGGEL   93 (304)
T ss_dssp             CCSCBH
T ss_pred             CCCccH
Confidence            998654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.67  E-value=0.00026  Score=63.20  Aligned_cols=80  Identities=15%  Similarity=0.087  Sum_probs=47.6

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-----cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCC--
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-----SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT--  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-----~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~--  117 (326)
                      +..-.+.++.|..+.||+......     .+++|.....  .   ...+..|.++++.+..   -.+++++.......  
T Consensus        24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH---PHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCC---TTBCCCCEEEECC---
T ss_pred             HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCC---Cceehhhceeeccccc
Confidence            455567889999999999975432     5888987642  1   2345567776666532   23555555433211  


Q ss_pred             ---CceEEEEeeecCCCC
Q 020393          118 ---GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ---~~~~~v~e~l~G~~~  132 (326)
                         ...+++||+++|.++
T Consensus       101 ~~~~~~~~v~e~~~~~~L  118 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDL  118 (323)
T ss_dssp             ----CEEEEEECCTTCBH
T ss_pred             cCCCccEEEEEeccCCcH
Confidence               134999999998755

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=97.67  E-value=0.00019  Score=64.47  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=51.5

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      +..-++.++.|..+.||+.... ++     ++++|.....    ....+..|..+++.+..   -.+++++....  .+.
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~--~~~   90 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST   90 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCB---TTBCCEEEEEE--SSS
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC---CCEeEEEEEEe--cCC
Confidence            4556778899999999998753 23     3577776431    23446778888877753   24666666544  356


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++++++++|..+
T Consensus        91 ~~~v~e~~~~g~L  103 (327)
T 3poz_A           91 VQLITQLMPFGCL  103 (327)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             eEEEEEecCCCcH
Confidence            8899999998654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=97.67  E-value=0.00039  Score=63.66  Aligned_cols=79  Identities=22%  Similarity=0.157  Sum_probs=52.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-++.++.|..+.||+....      .+ .+++|......    ...+..|..+++.+..   -.+++++..... .+
T Consensus        72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~-~~  147 (367)
T 3l9p_A           72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH---QNIVRCIGVSLQ-SL  147 (367)
T ss_dssp             GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SS
T ss_pred             HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCC---CCCCeEEEEEec-CC
Confidence            3445677899999999998842      12 68899875421    2235567777776632   245666665433 46


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..++|||+++|.++
T Consensus       148 ~~~lv~e~~~~g~L  161 (367)
T 3l9p_A          148 PRFILLELMAGGDL  161 (367)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             CCEEEEEeCCCCCH
Confidence            77999999998654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=97.67  E-value=0.00017  Score=68.99  Aligned_cols=78  Identities=17%  Similarity=0.059  Sum_probs=51.0

Q ss_pred             eeeEeEeCCccccceEEEEeCC--ccEEEEecCCC----------------CcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           51 ITKICPVGGGCINLASRYGTDA--GSFFVKTNRSI----------------GPSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~----------------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      -.-++.++.|..+.||++....  ..+++|+....                ....+..|..+++.|..   -.+++++..
T Consensus        38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~  114 (504)
T 3q5i_A           38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH---PNIIKLFDV  114 (504)
T ss_dssp             EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC---TTBCCEEEE
T ss_pred             eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC---CCCCeEEEE
Confidence            3447789999999999998643  36888876431                12335678777776642   236666665


Q ss_pred             cccCCCceEEEEeeecCCCC
Q 020393          113 GALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ... .+..++|||+++|..+
T Consensus       115 ~~~-~~~~~lv~e~~~gg~L  133 (504)
T 3q5i_A          115 FED-KKYFYLVTEFYEGGEL  133 (504)
T ss_dssp             EEC-SSEEEEEEECCTTCBH
T ss_pred             EEc-CCEEEEEEecCCCCcH
Confidence            443 4678999999998654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=97.66  E-value=0.00018  Score=65.42  Aligned_cols=78  Identities=18%  Similarity=0.018  Sum_probs=51.4

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---CcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~---vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-++.++.|..+.||+....  +..+++|+.....  ......|..+++.+... .+.   +.+++..... .+..+++
T Consensus        37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~h~~iv~~~~~~~~-~~~~~lv  114 (360)
T 3llt_A           37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQND-DINNNNIVKYHGKFMY-YDHMCLI  114 (360)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCC-STTGGGBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhccc-CCCCCCeecccceeeE-CCeeEEE
Confidence            455677899999999999873  3368899876421  23356688888888632 233   4444443322 4678999


Q ss_pred             EeeecCCC
Q 020393          124 MEFIEFGS  131 (326)
Q Consensus       124 ~e~l~G~~  131 (326)
                      ||++ |.+
T Consensus       115 ~e~~-~~~  121 (360)
T 3llt_A          115 FEPL-GPS  121 (360)
T ss_dssp             ECCC-CCB
T ss_pred             EcCC-CCC
Confidence            9999 543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.66  E-value=0.00017  Score=68.79  Aligned_cols=77  Identities=14%  Similarity=0.079  Sum_probs=50.1

Q ss_pred             eeEeEeCCccccceEEEEeC-C-ccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.++.|..+.||++... + ..+++|+...     .....+..|..+++.|..   -.+++++..... .+..++||
T Consensus        40 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~  115 (494)
T 3lij_A           40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH---PNIMKLYDFFED-KRNYYLVM  115 (494)
T ss_dssp             EEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCC---CCCCeEEEEEEe-CCEEEEEE
Confidence            34677899999999999864 3 3688887643     123456678887776642   235666655433 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus       116 e~~~~g~L  123 (494)
T 3lij_A          116 ECYKGGEL  123 (494)
T ss_dssp             ECCCSCBH
T ss_pred             ecCCCCcH
Confidence            99998754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=97.66  E-value=0.00017  Score=65.59  Aligned_cols=92  Identities=14%  Similarity=0.017  Sum_probs=58.3

Q ss_pred             hHHHHHHhc-CC----CcceeeEeEeCCccccceEEEEeC--CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCC
Q 020393           37 PIREWILSE-GK----ATHITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIR  105 (326)
Q Consensus        37 ~i~~~l~~~-~~----~~~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~  105 (326)
                      .+.+++... ..    .....-++.++.|....||++...  +..+++|+.....    ...+..|..+++.+..   -.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h---~~   92 (360)
T 3eqc_A           16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS---PY   92 (360)
T ss_dssp             HHHHHHHHHHTCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCC---TT
T ss_pred             hHHHHhhhhhcccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCC---CC
Confidence            455666532 11    224566778899999999999875  3368888875431    2334566665555531   24


Q ss_pred             CcceeeecccCCCceEEEEeeecCCCC
Q 020393          106 APRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       106 vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +++++..... .+..+++|||++|.++
T Consensus        93 iv~~~~~~~~-~~~~~lv~e~~~~~~L  118 (360)
T 3eqc_A           93 IVGFYGAFYS-DGEISICMEHMDGGSL  118 (360)
T ss_dssp             BCCEEEEEEE-TTEEEEEECCCTTCBH
T ss_pred             EEEEeEEEEE-CCEEEEEEECCCCCCH
Confidence            5666654433 5688999999998655

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=97.66  E-value=0.00036  Score=63.63  Aligned_cols=77  Identities=13%  Similarity=0.066  Sum_probs=50.4

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~  119 (326)
                      .-.-++.++.|....||+.... ++ .+++|......    ...+..|..+++.+..   -.+++++......    ...
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH---ENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC---TTBCCCCEEECCSSTTTCCC
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCC---CCCccceeEEecCCccccce
Confidence            4455677899999999999764 33 68889876422    1335678888877743   2344444433221    246


Q ss_pred             eEEEEeeecC
Q 020393          120 SYIIMEFIEF  129 (326)
Q Consensus       120 ~~~v~e~l~G  129 (326)
                      .+++|++++|
T Consensus       105 ~~iv~e~~~~  114 (364)
T 3qyz_A          105 VYIVQDLMET  114 (364)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEcccCc
Confidence            8999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.66  E-value=0.00014  Score=63.41  Aligned_cols=78  Identities=17%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc-------------
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL-------------  115 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-------------  115 (326)
                      -.-++.++.|..+.+|++...  +..+++|...... ..+..|..+++.+..   -.+.+++.....             
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~~~~~~   88 (284)
T 2a19_B           13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVKALAKLDH---VNIVHYNGCWDGFDYDPETSSKNSS   88 (284)
T ss_dssp             EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHHHHHHCCC---TTBCCEEEEEEEEEEC---------
T ss_pred             cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHHHHHhCCC---CCEEEEeeeEeccccCccccccccc
Confidence            345667888999999999875  3478999876533 456789888887753   224444432110             


Q ss_pred             --CCCceEEEEeeecCCCC
Q 020393          116 --PTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       116 --~~~~~~~v~e~l~G~~~  132 (326)
                        ..+..+++||+++|.++
T Consensus        89 ~~~~~~~~lv~e~~~~~~L  107 (284)
T 2a19_B           89 RSKTKCLFIQMEFCDKGTL  107 (284)
T ss_dssp             CCEEEEEEEEECCCCSCBH
T ss_pred             ccCcceEEEEEeccCCCCH
Confidence              02347999999998654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.66  E-value=0.00017  Score=63.30  Aligned_cols=72  Identities=14%  Similarity=0.032  Sum_probs=50.2

Q ss_pred             EeCCccccceEEEEeC---Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD---AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~---~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|..+.||+....   ++ .+++|......    ...+..|.++++.+..   -.+++++....  .+..+++||++
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~--~~~~~lv~e~~   91 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVRLIGVCQ--AEALMLVMEMA   91 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSEEEEEECC
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCC---CCEeEEEEEec--CCCcEEEEEeC
Confidence            6888999999998642   23 68889886532    2345678888877742   34666666543  46789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus        92 ~~~~L   96 (287)
T 1u59_A           92 GGGPL   96 (287)
T ss_dssp             TTEEH
T ss_pred             CCCCH
Confidence            98644

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=97.66  E-value=0.00017  Score=63.51  Aligned_cols=74  Identities=18%  Similarity=0.159  Sum_probs=49.0

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.++.|....||+....  +..+++|.....     ....+..|...++.+..   -.+++++..... ++..+++|
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv~   81 (299)
T 2r3i_A            6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVF   81 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEE
T ss_pred             hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCC---CCeeeEEEEEec-CCceEEEE
Confidence            44567888899999999864  347888987532     12445677776666532   245666655433 46889999


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      |+++|
T Consensus        82 e~~~~   86 (299)
T 2r3i_A           82 EFLHQ   86 (299)
T ss_dssp             ECCSE
T ss_pred             EcccC
Confidence            99986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=97.66  E-value=0.00026  Score=62.90  Aligned_cols=95  Identities=15%  Similarity=0.099  Sum_probs=51.1

Q ss_pred             chhHHHHHHhcC-CCcceeeEeEeCCccccceEEEEeCC--c---cEEEEecCCCC-----cchHHHHHHHHHHHHhcCC
Q 020393           35 DDPIREWILSEG-KATHITKICPVGGGCINLASRYGTDA--G---SFFVKTNRSIG-----PSMFEGEALGLGAMYETRT  103 (326)
Q Consensus        35 ~~~i~~~l~~~~-~~~~v~~v~~l~~G~~n~~y~v~~~~--~---~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~  103 (326)
                      .+++..-+.... ......-.+.++.|....||+.....  +   .+++|......     ...+..|...++.+..   
T Consensus        19 ~eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---   95 (313)
T 3brb_A           19 SEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH---   95 (313)
T ss_dssp             -----CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC---
T ss_pred             hHhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC---
Confidence            344554444442 22345566778999999999986532  1   68999876421     1235567766666542   


Q ss_pred             CCCcceeeecccC----CCceEEEEeeecCCCC
Q 020393          104 IRAPRPFKVGALP----TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       104 ~~vP~~~~~~~~~----~~~~~~v~e~l~G~~~  132 (326)
                      -.+.+++......    ....+++|++++|.++
T Consensus        96 ~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L  128 (313)
T 3brb_A           96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL  128 (313)
T ss_dssp             TTBCCCCEEEEC-------CEEEEEECCTTCBH
T ss_pred             CCeeeeeEEEeeccccCCcccEEEEecccCCCH
Confidence            2344444433221    1256999999998755

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=97.65  E-value=2.1e-05  Score=69.55  Aligned_cols=79  Identities=9%  Similarity=0.031  Sum_probs=41.1

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      ...-.+.++.|....||+....  +..+++|.....    ....+..|...++.+..   -.+++++..... .+..+++
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   91 (303)
T 2vwi_A           16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH---PNIVSYYTSFVV-KDELWLV   91 (303)
T ss_dssp             CCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCC---TTBCCEEEEEES-SSCEEEE
T ss_pred             hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCC---CCEeeEEEEEee-cCCcEEE
Confidence            3445667888999999999753  347899987532    12233445544433321   234555544332 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        92 ~e~~~~~~L  100 (303)
T 2vwi_A           92 MKLLSGGSV  100 (303)
T ss_dssp             EECCTTCBH
T ss_pred             ehhccCCch
Confidence            999998754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=97.65  E-value=0.00011  Score=70.12  Aligned_cols=77  Identities=13%  Similarity=0.069  Sum_probs=52.0

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-.+.++.|..+.||+....  +..+++|+...      .....+..|..+++.+..   -.+.+++..... .+..++|
T Consensus        19 ~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~H---pnIv~l~~~~~~-~~~~~lv   94 (476)
T 2y94_A           19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH---PHIIKLYQVIST-PSDIFMV   94 (476)
T ss_dssp             EEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEE
Confidence            34567889999999999764  34788998642      122346678777765542   235566655433 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        95 ~E~~~gg~L  103 (476)
T 2y94_A           95 MEYVSGGEL  103 (476)
T ss_dssp             EECCSSEEH
T ss_pred             EeCCCCCcH
Confidence            999998654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=97.65  E-value=0.00015  Score=67.35  Aligned_cols=74  Identities=15%  Similarity=-0.027  Sum_probs=49.2

Q ss_pred             eEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~e~l~G  129 (326)
                      +.++.|..+.||+.... ++ .+.+|+...  ......|..++..+..+  -.+.+++.....  . .+..|+||||++|
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~E~~~~~~~~~h--p~iv~l~~~~~~~~~~~~~~~lv~E~~~g  143 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDG  143 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTS--TTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc--chhHHHHHHHHHHhcCC--CCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence            46888999999999764 23 689998753  23466787776555443  235566553321  1 2467999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus       144 g~L  146 (400)
T 1nxk_A          144 GEL  146 (400)
T ss_dssp             EEH
T ss_pred             CcH
Confidence            654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.64  E-value=0.0001  Score=69.10  Aligned_cols=77  Identities=9%  Similarity=0.016  Sum_probs=52.5

Q ss_pred             eeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---CcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~---vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.++.|....||+..... + .+++|+.....  ...+..|..+++.+.......   +.+++..... .+..+++|
T Consensus       100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~lv~  178 (429)
T 3kvw_A          100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHICMTF  178 (429)
T ss_dssp             EEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEEEEEE
T ss_pred             EEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeEEEEE
Confidence            345678899999999997643 3 68899886532  234567889999987643333   3444433322 46789999


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      |+++|
T Consensus       179 e~~~~  183 (429)
T 3kvw_A          179 ELLSM  183 (429)
T ss_dssp             CCCCC
T ss_pred             eccCC
Confidence            99976

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.64  E-value=0.00024  Score=67.63  Aligned_cols=75  Identities=17%  Similarity=0.175  Sum_probs=53.4

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ++.++.|..+.||++...  +..+++|+...     .....+..|..+++.|..   -.+++++..... .+..+++||+
T Consensus        27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~e~  102 (486)
T 3mwu_A           27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH---PNIMKLFEILED-SSSFYIVGEL  102 (486)
T ss_dssp             EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEEEECC
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCC---CCcCeEEEEEEc-CCEEEEEEEc
Confidence            567889999999999864  33788898632     233456789888888843   235666665443 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus       103 ~~~~~L  108 (486)
T 3mwu_A          103 YTGGEL  108 (486)
T ss_dssp             CCSCBH
T ss_pred             CCCCcH
Confidence            998654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.64  E-value=0.0002  Score=63.89  Aligned_cols=76  Identities=14%  Similarity=0.028  Sum_probs=45.7

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCc-----chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGP-----SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~-----~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-++.++.|....||+.... ++ .+++|.......     .....|...+..+..+  -.+++++..... .+..+++
T Consensus        59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h--~~iv~l~~~~~~-~~~~~lv  135 (311)
T 3p1a_A           59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH--PCCVRLEQAWEE-GGILYLQ  135 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEEEE-TTEEEEE
T ss_pred             eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCC--CcEEEEEEEEEe-CCEEEEE
Confidence            445677899999999999875 34 688897653211     1112233323223222  345566655433 5688999


Q ss_pred             EeeecC
Q 020393          124 MEFIEF  129 (326)
Q Consensus       124 ~e~l~G  129 (326)
                      ||++.|
T Consensus       136 ~e~~~~  141 (311)
T 3p1a_A          136 TELCGP  141 (311)
T ss_dssp             EECCCC
T ss_pred             EeccCC
Confidence            999955

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=97.64  E-value=0.00045  Score=62.25  Aligned_cols=79  Identities=15%  Similarity=0.075  Sum_probs=52.4

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc--cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCC---CcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG--SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIR---APRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~--~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~---vP~~~~~~~~~~~~~~~  122 (326)
                      -.-++.++.|..+.||+.... .+  .+++|+.....  ...+..|..+++.|.......   +..++..... .+..++
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~l   99 (355)
T 2eu9_A           21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHMCI   99 (355)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEEEE
T ss_pred             EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeEEE
Confidence            345667888999999998753 22  68889986531  345677899999887642222   3333333222 468899


Q ss_pred             EEeeecCC
Q 020393          123 IMEFIEFG  130 (326)
Q Consensus       123 v~e~l~G~  130 (326)
                      +||++.|.
T Consensus       100 v~e~~~~~  107 (355)
T 2eu9_A          100 AFELLGKN  107 (355)
T ss_dssp             EEECCCCB
T ss_pred             EEeccCCC
Confidence            99999653

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.64  E-value=0.00013  Score=67.49  Aligned_cols=78  Identities=21%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~  124 (326)
                      .-.+.++.|....||+....  +..+++|+....    ....+..|.++++.+..   -.+++++...... ....++||
T Consensus        12 ~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A           12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH---KNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC---TTBCCEEEEEECTTTCCEEEEE
T ss_pred             EEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC---CCCCeEEEeeccCCCCeeEEEE
Confidence            44566888999999999875  337889987642    23445678888877752   2456666554332 23679999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        89 e~~~~g~L   96 (396)
T 4eut_A           89 EFCPCGSL   96 (396)
T ss_dssp             CCCTTEEH
T ss_pred             ecCCCCCH
Confidence            99998654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.62  E-value=0.00034  Score=60.99  Aligned_cols=79  Identities=14%  Similarity=0.068  Sum_probs=50.3

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-++.++.|....||+....  +..+++|......     ...+..|...+..+..+  -.+++++..... .+..+++
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h--~~iv~~~~~~~~-~~~~~lv   89 (289)
T 1x8b_A           13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH--SHVVRYFSAWAE-DDHMLIQ   89 (289)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSC--TTBCCEEEEEEE-TTEEEEE
T ss_pred             hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCC--CCeeeeeeeeec-CCeEEEE
Confidence            344567888999999999874  3478889875321     12233455555444222  235556654432 5688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|.++
T Consensus        90 ~e~~~~~~L   98 (289)
T 1x8b_A           90 NEYCNGGSL   98 (289)
T ss_dssp             EECCTTCBH
T ss_pred             EEecCCCcH
Confidence            999998755

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.62  E-value=0.00032  Score=61.67  Aligned_cols=77  Identities=17%  Similarity=0.069  Sum_probs=51.3

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +..-.+.++.|..+.||+.... +.+.+|......     ...+..|..+++.+..   ..+.+++....  .+..+++|
T Consensus        25 ~y~~~~~lG~G~~g~Vy~~~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~--~~~~~lv~   98 (289)
T 3og7_A           25 QITVGQRIGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH---VNILLFMGYST--APQLAIVT   98 (289)
T ss_dssp             SCEEEEEEEECSSEEEEEEESS-SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEE
T ss_pred             ceeeeeEecCCCCeEEEEEEEc-CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC---CcEEEEEeecc--CCccEEEE
Confidence            5566778899999999998754 468888875321     2335667766665542   23445555432  46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ++++|.++
T Consensus        99 e~~~~~~L  106 (289)
T 3og7_A           99 QWCEGSSL  106 (289)
T ss_dssp             ECCCEEEH
T ss_pred             EecCCCcH
Confidence            99998644

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=97.62  E-value=0.00031  Score=64.66  Aligned_cols=76  Identities=12%  Similarity=0.079  Sum_probs=42.4

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      .-++.++.|..+.||+....  +..+++|.....  .   ......|..++..+..+  -.+++++...... ....|+|
T Consensus        12 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h--~niv~l~~~~~~~~~~~~~lv   89 (388)
T 3oz6_A           12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH--ENIVNLLNVLRADNDRDVYLV   89 (388)
T ss_dssp             EEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTC--TTBCCEEEEEECTTSSCEEEE
T ss_pred             EEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCC--CCCCeeeeEEecCCCCEEEEE
Confidence            34567889999999998753  336888876431  1   12344677777777643  2456666553321 2467999


Q ss_pred             EeeecC
Q 020393          124 MEFIEF  129 (326)
Q Consensus       124 ~e~l~G  129 (326)
                      ||+++|
T Consensus        90 ~e~~~~   95 (388)
T 3oz6_A           90 FDYMET   95 (388)
T ss_dssp             EECCSE
T ss_pred             ecccCc
Confidence            999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.61  E-value=0.00031  Score=62.14  Aligned_cols=74  Identities=15%  Similarity=-0.030  Sum_probs=49.4

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEEEEeeecC
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIMEFIEF  129 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~e~l~G  129 (326)
                      +.++.|..+.||++...  +..+++|....  ......|...+..+..+  -.+++++.....  . .+..+++||+++|
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~e~~~~~~~~~h--~~i~~~~~~~~~~~~~~~~~~lv~e~~~~   99 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDG   99 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTS--TTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc--cHHHHHHHHHHHHhccC--CCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence            45888999999999763  33789998754  24466787777555443  245555554321  1 3467999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      .++
T Consensus       100 ~~L  102 (299)
T 3m2w_A          100 GEL  102 (299)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=97.61  E-value=0.00075  Score=63.19  Aligned_cols=77  Identities=12%  Similarity=0.002  Sum_probs=51.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC----CC
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~  118 (326)
                      .-.-.+.++.|....||+..... + .+++|......     ...+..|..+++.+..   -.+.+++......    .+
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS---DYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCTTTCC
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCC---CCcceEEEEEecCCCCcCC
Confidence            44556778999999999997643 3 68889875421     2345678888877753   2355555543321    15


Q ss_pred             ceEEEEeeecC
Q 020393          119 GSYIIMEFIEF  129 (326)
Q Consensus       119 ~~~~v~e~l~G  129 (326)
                      ..|+|||+++|
T Consensus       104 ~~~lv~e~~~~  114 (432)
T 3n9x_A          104 ELYIVLEIADS  114 (432)
T ss_dssp             CEEEEEECCSE
T ss_pred             eEEEEEecCCc
Confidence            68999999876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=97.61  E-value=0.0001  Score=73.31  Aligned_cols=79  Identities=16%  Similarity=0.091  Sum_probs=50.2

Q ss_pred             eeEeEeCCccccceEEEEeC--Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC----ce
Q 020393           52 TKICPVGGGCINLASRYGTD--AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG----GS  120 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~----~~  120 (326)
                      .-...++.|..+.||+....  ++ .+++|......    ...+..|..++..|..   -.+++++........    ..
T Consensus        83 ~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           83 EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVH---PSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             EEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCC---TTBCCEEEEEEEECTTSCEEE
T ss_pred             EEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCC---CCcCeEeeeEeecCCCCCcee
Confidence            44566888999999999763  33 68899775421    1234566666655532   246666655432111    16


Q ss_pred             EEEEeeecCCCCC
Q 020393          121 YIIMEFIEFGSSR  133 (326)
Q Consensus       121 ~~v~e~l~G~~~~  133 (326)
                      |+||||++|.++.
T Consensus       160 ~lv~E~~~g~~L~  172 (681)
T 2pzi_A          160 YIVMEYVGGQSLK  172 (681)
T ss_dssp             EEEEECCCCEECC
T ss_pred             EEEEEeCCCCcHH
Confidence            9999999998763

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=97.60  E-value=0.00048  Score=61.10  Aligned_cols=78  Identities=12%  Similarity=-0.007  Sum_probs=49.8

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -.-.+.++.|..+.||++...  +..+++|.....   .   ...+..|...++.+..   -.+++++..... .+..++
T Consensus        34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~-~~~~~l  109 (310)
T 2wqm_A           34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNVIKYYASFIE-DNELNI  109 (310)
T ss_dssp             EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEc-CCcEEE
Confidence            344567888999999999863  337899987532   1   2335567766666532   235556654332 568899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus       110 v~e~~~~~~L  119 (310)
T 2wqm_A          110 VLELADAGDL  119 (310)
T ss_dssp             EEECCCSCBH
T ss_pred             EEecCCCCCH
Confidence            9999998654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.59  E-value=0.00051  Score=63.46  Aligned_cols=73  Identities=12%  Similarity=0.118  Sum_probs=50.4

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.++.|....||++...++ .+.+|+.....     ...+..|..+++.|... .-.+.+++..... ++..+++||
T Consensus        59 ~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~-~~~iv~~~~~~~~-~~~~~lv~E  136 (390)
T 2zmd_A           59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH-SDKIIRLYDYEIT-DQYIYMVME  136 (390)
T ss_dssp             EEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccC-CCeEEEEEEEEec-CCEEEEEEe
Confidence            3456788999999999976555 68889764321     24467899999888752 1346666655433 467899999


Q ss_pred             e
Q 020393          126 F  126 (326)
Q Consensus       126 ~  126 (326)
                      +
T Consensus       137 ~  137 (390)
T 2zmd_A          137 C  137 (390)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=97.57  E-value=0.00073  Score=60.49  Aligned_cols=79  Identities=23%  Similarity=0.148  Sum_probs=50.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      ...-++.++.|....||+....       ...+++|......    ...+..|..+++.+..   -.+++++..... .+
T Consensus        31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~  106 (327)
T 2yfx_A           31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH---QNIVRCIGVSLQ-SL  106 (327)
T ss_dssp             GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SS
T ss_pred             heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCC---CCCCeEEEEEcC-CC
Confidence            4556677899999999998732       2268999875421    2335567777776632   245666665433 45


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       107 ~~~lv~e~~~~~~L  120 (327)
T 2yfx_A          107 PRFILMELMAGGDL  120 (327)
T ss_dssp             SCEEEEECCTTEEH
T ss_pred             CcEEEEecCCCCcH
Confidence            78999999988654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=97.57  E-value=0.0002  Score=64.40  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      +-.-++.++.|....||+.... ++     ++++|.....    ....+..|..+++.+..   -.+++++....  .+.
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~h---p~iv~~~~~~~--~~~   90 (327)
T 3lzb_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TST   90 (327)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCB---TTBCCCCEEEE--SSS
T ss_pred             HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCC---CCeeEEEEEEe--cCC
Confidence            4556778899999999999753 33     3567765431    23446677777766642   23455555433  356


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++++++++|..+
T Consensus        91 ~~~v~~~~~~g~L  103 (327)
T 3lzb_A           91 VQLITQLMPFGCL  103 (327)
T ss_dssp             EEEEECCCSSCBH
T ss_pred             ceEEEEecCCCcH
Confidence            8899999998654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=97.56  E-value=0.00018  Score=63.66  Aligned_cols=74  Identities=16%  Similarity=0.065  Sum_probs=47.2

Q ss_pred             EeEeCCccccceEEEEeCC--ccEEEEecCCC-------CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEE
Q 020393           54 ICPVGGGCINLASRYGTDA--GSFFVKTNRSI-------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v  123 (326)
                      .+.++.|..+.||++....  ..+++|+....       ....+..|..+++.+..   -.+.+++...... .+..+++
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~lv   86 (305)
T 2wtk_C           10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH---KNVIQLVDVLYNEEKQKMYMV   86 (305)
T ss_dssp             CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEECC---CEEEE
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCC---CCeeEEEEEEEcCCCCeEEEE
Confidence            3567788899999998643  37888987531       12446677777666642   2355555543211 3578999


Q ss_pred             EeeecCC
Q 020393          124 MEFIEFG  130 (326)
Q Consensus       124 ~e~l~G~  130 (326)
                      ||+++|.
T Consensus        87 ~e~~~~~   93 (305)
T 2wtk_C           87 MEYCVCG   93 (305)
T ss_dssp             EECCSEE
T ss_pred             ehhccCC
Confidence            9999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=97.55  E-value=0.00037  Score=63.62  Aligned_cols=80  Identities=14%  Similarity=0.086  Sum_probs=49.1

Q ss_pred             eeeEeEeCCccccceEEEEeCC-------ccEEEEecCCCCcchHHHHHHHHHHHHh-----------c-CCCCCcceee
Q 020393           51 ITKICPVGGGCINLASRYGTDA-------GSFFVKTNRSIGPSMFEGEALGLGAMYE-----------T-RTIRAPRPFK  111 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~-------~~~vlK~~~~~~~~~~~~E~~~l~~L~~-----------~-~~~~vP~~~~  111 (326)
                      -.-.+.++.|..+.||+.....       ..+++|+..... ..+..|.++++.+..           . .-..+++++.
T Consensus        37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~  115 (364)
T 3op5_A           37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN-GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG  115 (364)
T ss_dssp             EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC-HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred             EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc-hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence            3446678999999999997643       368999876533 335566666665533           0 1123566665


Q ss_pred             ecccC---CCceEEEEeeecCCCC
Q 020393          112 VGALP---TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       112 ~~~~~---~~~~~~v~e~l~G~~~  132 (326)
                      .....   ....+++||++ |.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-g~~L  138 (364)
T 3op5_A          116 SGLHDKNGKSYRFMIMDRF-GSDL  138 (364)
T ss_dssp             EEEEEETTEEEEEEEEECE-EEEH
T ss_pred             eeeeccCCcceEEEEEeCC-CCCH
Confidence            43321   13579999999 6543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.55  E-value=0.00038  Score=62.32  Aligned_cols=78  Identities=12%  Similarity=-0.103  Sum_probs=54.1

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +-.-.+.++.|....||+.... ++ .+++|.....         ....+..|..+++.+... -..+++++..... .+
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~~i~~~~~~~~~-~~  121 (320)
T 3a99_A           44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG-FSGVIRLLDWFER-PD  121 (320)
T ss_dssp             TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS-SCSBCCEEEEEEC-SS
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccC-CCCceEEEEEEec-CC
Confidence            4566677899999999999753 33 7889986431         124456789989888641 1346666665443 46


Q ss_pred             ceEEEEeeecC
Q 020393          119 GSYIIMEFIEF  129 (326)
Q Consensus       119 ~~~~v~e~l~G  129 (326)
                      ..+++|++..+
T Consensus       122 ~~~lv~e~~~~  132 (320)
T 3a99_A          122 SFVLILERPEP  132 (320)
T ss_dssp             EEEEEEECCSS
T ss_pred             cEEEEEEcCCC
Confidence            78999999875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=97.55  E-value=0.00019  Score=63.13  Aligned_cols=77  Identities=12%  Similarity=0.007  Sum_probs=47.1

Q ss_pred             eEeEeCCccccceEEEEeCC-c-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEE
Q 020393           53 KICPVGGGCINLASRYGTDA-G-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~  122 (326)
                      -...++.|....||+..... + .+.+|.....     ....+..|..+++.+..   -.+.+++.....  . .+..++
T Consensus        30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH---PNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEEESSSCEEEEE
T ss_pred             eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCC---CCeeeeeeeeccccCCCceEEE
Confidence            34458889999999997643 3 5667776431     12335567766665532   234555543211  1 245799


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +||+++|.++
T Consensus       107 v~e~~~~~~L  116 (290)
T 1t4h_A          107 VTELMTSGTL  116 (290)
T ss_dssp             EEECCCSCBH
T ss_pred             EEEecCCCCH
Confidence            9999998654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.54  E-value=0.00011  Score=64.60  Aligned_cols=78  Identities=18%  Similarity=0.197  Sum_probs=48.1

Q ss_pred             eeEeEeCCccccceEEEEeC-C-ccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeeccc------------
Q 020393           52 TKICPVGGGCINLASRYGTD-A-GSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL------------  115 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~------------  115 (326)
                      .-++.++.|..+.||+.... + ..+++|.....  ....+..|..+++.+..   -.+.+++.....            
T Consensus         9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH---QYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEECCCCCC------
T ss_pred             hhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCc---hHHHHHHHHHHhhcchhhhhcccc
Confidence            34567888899999999863 3 37888987532  12335567766665532   223444432110            


Q ss_pred             CCCceEEEEeeecCCCC
Q 020393          116 PTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       116 ~~~~~~~v~e~l~G~~~  132 (326)
                      ..+..+++||+++|.++
T Consensus        86 ~~~~~~lv~e~~~~~~L  102 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTL  102 (303)
T ss_dssp             CEEEEEEEEECCCSCBH
T ss_pred             cCCceEEEEecCCCCCH
Confidence            02467999999998654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.53  E-value=0.00012  Score=68.72  Aligned_cols=76  Identities=16%  Similarity=-0.018  Sum_probs=51.3

Q ss_pred             eeeEeEeCCccccceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           51 ITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      ....+.++.|..+.||.....++ .+++|............|..+++.+..+  -.+.+++..... .+..+++||+++|
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~H--pnIv~~~~~~~~-~~~~~lv~E~~~g   93 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDH--PNVIRYYCSETT-DRFLYIALELCNL   93 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTS--TTBCCEEEEEEC-SSEEEEEECCCSE
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCC--CCcCeEEEEEec-CCeEEEEEecCCC
Confidence            34456688898899977655544 7888986543334456788888777543  235666655433 4678999999976

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.52  E-value=0.00057  Score=63.21  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=51.7

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .-++.++.|....||+.... ++ .+++|+.....   ...+..|..+++.|..   -.+.+++..... .+..+++||+
T Consensus        54 ~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~lv~E~  129 (387)
T 1kob_A           54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH---PKLINLHDAFED-KYEMVLILEF  129 (387)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS---TTBCCEEEEEEC-SSEEEEEEEC
T ss_pred             EEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCC---cCCCeEEEEEEe-CCEEEEEEEc
Confidence            34567889999999998764 33 68888875421   2345677777766532   235556654433 4688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|.++
T Consensus       130 ~~gg~L  135 (387)
T 1kob_A          130 LSGGEL  135 (387)
T ss_dssp             CCCCBH
T ss_pred             CCCCcH
Confidence            998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=97.52  E-value=0.00024  Score=67.48  Aligned_cols=76  Identities=13%  Similarity=0.004  Sum_probs=52.5

Q ss_pred             eEeEeCCccccceEEEEeC--CccEEEEecCCC------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD--AGSFFVKTNRSI------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -.+.++.|..+.||++...  +..+++|+....      ....+..|..+++.|..   -.+++++..... .+..+++|
T Consensus        30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~-~~~~~lv~  105 (484)
T 3nyv_A           30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH---PNIMKLYEFFED-KGYFYLVG  105 (484)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCC---CCCCcEEEEEEe-CCEEEEEE
Confidence            3567888999999998864  337889986421      23446678877776632   245666655433 56889999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|..+
T Consensus       106 e~~~~~~L  113 (484)
T 3nyv_A          106 EVYTGGEL  113 (484)
T ss_dssp             CCCCSCBH
T ss_pred             ecCCCCCH
Confidence            99998754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.52  E-value=0.00022  Score=65.66  Aligned_cols=76  Identities=14%  Similarity=0.182  Sum_probs=46.1

Q ss_pred             EeEeCCccccceEEEEe--CCc---cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           54 ICPVGGGCINLASRYGT--DAG---SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~--~~~---~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .+.++.|....||+...  .++   .+.+|..... .   ...+..|..+++.+..   -.+.+++......++..+++|
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH---PNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCC---TTBCCCCEEECCCSSCCEEEE
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC---CCcceEEEEEEcCCCCeEEEE
Confidence            45689999999999865  232   3677776532 1   1234456655554431   234445543222246789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus       171 e~~~~g~L  178 (373)
T 3c1x_A          171 PYMKHGDL  178 (373)
T ss_dssp             ECCTTCBH
T ss_pred             ECCCCCCH
Confidence            99998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=97.52  E-value=0.00031  Score=61.70  Aligned_cols=78  Identities=17%  Similarity=0.158  Sum_probs=52.7

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-++.++.|....+|++...  +..+++|+...     .....+..|..+++.+..   -.+++++..... .+..+++
T Consensus        24 y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~-~~~~~lv   99 (287)
T 2wei_A           24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH---PNIMKLFEILED-SSSFYIV   99 (287)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             ceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccC---CCccEEEEEEeC-CCeEEEE
Confidence            344567888889999999874  34789998642     123446678877776632   235566655433 4688999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|..+
T Consensus       100 ~e~~~~~~L  108 (287)
T 2wei_A          100 GELYTGGEL  108 (287)
T ss_dssp             ECCCCSCBH
T ss_pred             EEccCCCCH
Confidence            999998654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.51  E-value=0.00031  Score=64.49  Aligned_cols=26  Identities=23%  Similarity=0.219  Sum_probs=24.1

Q ss_pred             ceeecCCCCCCeeecCCCCeEEEccc
Q 020393          225 CLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       225 ~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      .++|+|++|+|||++.++...|+||.
T Consensus       226 ~ivHrDikp~NIll~~~~~~kL~DFG  251 (377)
T 3byv_A          226 GLVHTYLRPVDIVLDQRGGVFLTGFE  251 (377)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCGG
T ss_pred             CeecCCCCHHHEEEcCCCCEEEEech
Confidence            69999999999999988888999984

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=97.51  E-value=0.00035  Score=63.96  Aligned_cols=49  Identities=8%  Similarity=-0.031  Sum_probs=34.4

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHh
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYE  100 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~  100 (326)
                      .-.+.++.|....||+.... ++ .+++|......      ...+..|..+++.|..
T Consensus        65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  121 (371)
T 3q60_A           65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG  121 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc
Confidence            34566888999999999864 33 68899876421      2345678777788864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.47  E-value=0.0006  Score=63.14  Aligned_cols=71  Identities=13%  Similarity=0.042  Sum_probs=43.8

Q ss_pred             EeCCccccceEEEEeC----CccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEeeecC
Q 020393           56 PVGGGCINLASRYGTD----AGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIMEFIEF  129 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~----~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G  129 (326)
                      .++.|..+.||+....    +..+++|..... ....+..|..+++.|..   -.+.+++...... ....++||||++|
T Consensus        28 ~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH---PNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             CCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCC---TTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             EeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCC---CCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            5888999999999854    236899987643 23456789888888853   2344444433211 4578999999987

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=97.46  E-value=0.00018  Score=67.72  Aligned_cols=76  Identities=12%  Similarity=-0.042  Sum_probs=42.8

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      -++.++.|..+.||++... ++ .+.+|+...      .....+..|..+++.+..   -.+++++..... .+..++||
T Consensus       152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~l~~~~~~-~~~~~lv~  227 (446)
T 4ejn_A          152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH---PFLTALKYSFQT-HDRLCFVM  227 (446)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSC---TTSCCEEEEEEE-TTEEEEEE
T ss_pred             EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCC---CeEeeEEEEEee-CCEEEEEE
Confidence            4566888999999998763 33 688897642      111223345544443321   234555544332 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|..+
T Consensus       228 e~~~~~~L  235 (446)
T 4ejn_A          228 EYANGGEL  235 (446)
T ss_dssp             CCCSSCBH
T ss_pred             eeCCCCcH
Confidence            99998754

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=97.46  E-value=0.00032  Score=66.56  Aligned_cols=74  Identities=12%  Similarity=0.115  Sum_probs=46.8

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCceE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~~  121 (326)
                      ++.++.|....||+....  +..+++|.....     ....+..|..+++.+..   -.+.+++......     ....|
T Consensus        67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l~~~~~~~~~~~~~~~~~  143 (464)
T 3ttj_A           67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH---KNIISLLNVFTPQKTLEEFQDVY  143 (464)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCCSTTTCCEEE
T ss_pred             EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCC---CCCCcEEEEEccCCccccCCeEE
Confidence            567899999999998753  336888886531     12334567777776643   2344444432211     24569


Q ss_pred             EEEeeecCC
Q 020393          122 IIMEFIEFG  130 (326)
Q Consensus       122 ~v~e~l~G~  130 (326)
                      +|||+++|.
T Consensus       144 lv~E~~~~~  152 (464)
T 3ttj_A          144 LVMELMDAN  152 (464)
T ss_dssp             EEEECCSEE
T ss_pred             EEEeCCCCC
Confidence            999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=97.45  E-value=0.0013  Score=59.37  Aligned_cols=77  Identities=14%  Similarity=0.097  Sum_probs=50.6

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCc
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~  119 (326)
                      .-.-.+.++.|..+.||+.... ++ .+++|......    ...+..|..+++.+..   -.+++++......    .+.
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH---ENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCSTTCCC
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcC---CCcCCeeeeecccccCccce
Confidence            3445667888999999999864 33 68899875422    1234568777777742   2355666543321    257


Q ss_pred             eEEEEeeecC
Q 020393          120 SYIIMEFIEF  129 (326)
Q Consensus       120 ~~~v~e~l~G  129 (326)
                      .+++||+++|
T Consensus        89 ~~lv~e~~~~   98 (353)
T 2b9h_A           89 VYIIQELMQT   98 (353)
T ss_dssp             EEEEECCCSE
T ss_pred             EEEEEeccCc
Confidence            8999999976

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=97.45  E-value=0.00043  Score=62.66  Aligned_cols=81  Identities=12%  Similarity=0.005  Sum_probs=43.6

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-----ccEEEEecCCCCcchHHHHHHHHHHHH------------hcCCCCCcceeee
Q 020393           50 HITKICPVGGGCINLASRYGTDA-----GSFFVKTNRSIGPSMFEGEALGLGAMY------------ETRTIRAPRPFKV  112 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-----~~~vlK~~~~~~~~~~~~E~~~l~~L~------------~~~~~~vP~~~~~  112 (326)
                      +-.-.+.++.|....||+.....     ..+++|...... .....|..+++.+.            ...-..+++++..
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN-GPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC--CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC-cchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            44556778999999999998743     368899876532 22344554444332            1111246666655


Q ss_pred             cccC---CCceEEEEeeecCCCC
Q 020393          113 GALP---TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       113 ~~~~---~~~~~~v~e~l~G~~~  132 (326)
                      ....   .+..+++||++ |.++
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L  138 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDL  138 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEH
T ss_pred             cccccCCCcEEEEEEecc-CCCH
Confidence            3321   35789999999 6543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.45  E-value=0.00059  Score=62.45  Aligned_cols=77  Identities=17%  Similarity=0.075  Sum_probs=48.2

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCC-----
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT-----  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~-----  117 (326)
                      .-.-.+.++.|..+.||+.... ++ .+++|......     ...+..|..+++.+..   -.+.+++.......     
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH---ENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCSSSTTC
T ss_pred             cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCC---CCchhhhhheeccCCcccc
Confidence            3445677899999999999764 33 78889876421     1334567777776642   23444544332211     


Q ss_pred             CceEEEEeeecC
Q 020393          118 GGSYIIMEFIEF  129 (326)
Q Consensus       118 ~~~~~v~e~l~G  129 (326)
                      ...+++||+++|
T Consensus       120 ~~~~lv~e~~~~  131 (371)
T 4exu_A          120 YDFYLVMPFMQT  131 (371)
T ss_dssp             CCCEEEEECCCE
T ss_pred             eeEEEEEccccc
Confidence            134999999986

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=97.44  E-value=0.00036  Score=65.79  Aligned_cols=76  Identities=9%  Similarity=0.021  Sum_probs=42.2

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC----CCc
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP----TGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~----~~~  119 (326)
                      -.-++.++.|....||++...  +..+.+|.....  .   ...+..|..+++.|..   -.+.+++......    ...
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH---DHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCTTTCCC
T ss_pred             eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCC---CCCCceEEEEecCCcccCce
Confidence            344566889999999999753  336888876432  1   2335678888887742   2355565543211    256


Q ss_pred             eEEEEeeecC
Q 020393          120 SYIIMEFIEF  129 (326)
Q Consensus       120 ~~~v~e~l~G  129 (326)
                      .|++||+.+|
T Consensus       132 ~~lv~e~~~~  141 (458)
T 3rp9_A          132 LYVVLEIADS  141 (458)
T ss_dssp             EEEEECCCSE
T ss_pred             EEEEEecccc
Confidence            8999998765

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.44  E-value=0.00033  Score=62.20  Aligned_cols=80  Identities=10%  Similarity=-0.145  Sum_probs=49.3

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC---------CcchHHHHHHHHHHHHhcC-CCCCcceeeecccCCCc
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI---------GPSMFEGEALGLGAMYETR-TIRAPRPFKVGALPTGG  119 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~-~~~vP~~~~~~~~~~~~  119 (326)
                      .-.+.++.|....||+....  +..+++|+....         ....+..|...+..+.... --.+++++..... .+.
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~-~~~  112 (312)
T 2iwi_A           34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET-QEG  112 (312)
T ss_dssp             EEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------
T ss_pred             EEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec-CCe
Confidence            34567888899999999763  337999987532         1233457888888886321 1235666655433 467


Q ss_pred             eEEEEee-ecCCCC
Q 020393          120 SYIIMEF-IEFGSS  132 (326)
Q Consensus       120 ~~~v~e~-l~G~~~  132 (326)
                      .+++|++ ++|.++
T Consensus       113 ~~~v~e~~~~~~~L  126 (312)
T 2iwi_A          113 FMLVLERPLPAQDL  126 (312)
T ss_dssp             CEEEEECCSSEEEH
T ss_pred             EEEEEEecCCCCCH
Confidence            8999998 666544

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.44  E-value=0.00086  Score=59.57  Aligned_cols=76  Identities=12%  Similarity=0.081  Sum_probs=52.0

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-.-++.++.|..+.||++...++ .+++|......     ...+..|..+++.+... .-.+.+++..... .+..+++
T Consensus        29 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~~~iv~~~~~~~~-~~~~~lv  106 (313)
T 3cek_A           29 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH-SDKIIRLYDYEIT-DQYIYMV  106 (313)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGG-CTTBCCEEEEEEC-SSEEEEE
T ss_pred             eEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhcccc-CCceEEEEEEeec-CCEEEEE
Confidence            345567788999999999987655 68889874321     24467889989888753 1346666655433 4678999


Q ss_pred             Eeee
Q 020393          124 MEFI  127 (326)
Q Consensus       124 ~e~l  127 (326)
                      ||+.
T Consensus       107 ~e~~  110 (313)
T 3cek_A          107 MECG  110 (313)
T ss_dssp             ECCC
T ss_pred             EecC
Confidence            9943

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.42  E-value=0.0012  Score=57.77  Aligned_cols=76  Identities=13%  Similarity=-0.050  Sum_probs=50.0

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ....++.|..+.||+.... ++ .+++|.....   ....+..|..+++.+..   -.+++++..... .+..+++||++
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv~e~~  101 (295)
T 2clq_A           26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH---KNIVQYLGSFSE-NGFIKIFMEQV  101 (295)
T ss_dssp             SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEECC
T ss_pred             CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCC---CCEeeEeeEEEe-CCcEEEEEEeC
Confidence            3446888899999999863 33 6888876542   23446678777776642   235556554432 46889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus       102 ~~~~L  106 (295)
T 2clq_A          102 PGGSL  106 (295)
T ss_dssp             SEEEH
T ss_pred             CCCCH
Confidence            88654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=97.41  E-value=0.00084  Score=61.44  Aligned_cols=75  Identities=16%  Similarity=0.098  Sum_probs=41.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----C
Q 020393           50 HITKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----T  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~  117 (326)
                      .-.-++.++.|..+.||+....  +..+++|.....  .   ...+..|..+++.+...   .+.+++......     .
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp---nIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE---NVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBT---TBCCCSEEECSCSSTTTC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCc---CCCCceeeEecCCccccC
Confidence            3455778999999999998763  337888987432  1   13345788887777532   244444432211     1


Q ss_pred             CceEEEEeee
Q 020393          118 GGSYIIMEFI  127 (326)
Q Consensus       118 ~~~~~v~e~l  127 (326)
                      ...|++||++
T Consensus       103 ~~~~lv~e~~  112 (367)
T 1cm8_A          103 TDFYLVMPFM  112 (367)
T ss_dssp             CCCEEEEECC
T ss_pred             ceEEEEEecC
Confidence            3469999998

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=97.41  E-value=0.00052  Score=62.91  Aligned_cols=80  Identities=10%  Similarity=-0.058  Sum_probs=52.0

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCC-----CCCcceeeeccc---CCC
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRT-----IRAPRPFKVGAL---PTG  118 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~-----~~vP~~~~~~~~---~~~  118 (326)
                      -.-++.++.|..+.||+.... ++ .+++|+.....  ...+..|..+++.+.....     ..+.+++.....   ...
T Consensus        39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~  118 (397)
T 1wak_A           39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT  118 (397)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEE
T ss_pred             EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCc
Confidence            345667888999999999764 33 68899886432  2446689999999975321     114444443221   134


Q ss_pred             ceEEEEeeecCC
Q 020393          119 GSYIIMEFIEFG  130 (326)
Q Consensus       119 ~~~~v~e~l~G~  130 (326)
                      ..+++||++.|.
T Consensus       119 ~~~lv~e~~~~~  130 (397)
T 1wak_A          119 HICMVFEVLGHH  130 (397)
T ss_dssp             EEEEEECCCCCB
T ss_pred             eEEEEEeccCcc
Confidence            789999999653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.40  E-value=0.00066  Score=63.35  Aligned_cols=76  Identities=13%  Similarity=0.003  Sum_probs=50.9

Q ss_pred             eeEeEeCCccccceEEEEeCC--ccEEEEecCCC-----------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           52 TKICPVGGGCINLASRYGTDA--GSFFVKTNRSI-----------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~-----------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      .-.+.++.|....||+.....  ..+.+|+....           ....+..|..+++.|..   -.+.+++....  .+
T Consensus       138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~l~~~~~--~~  212 (419)
T 3i6u_A          138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH---PCIIKIKNFFD--AE  212 (419)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC---TTBCCCCEEEE--SS
T ss_pred             EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cC
Confidence            345678889999999987643  37888875321           12346789988888843   23445554432  35


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus       213 ~~~lv~e~~~~g~L  226 (419)
T 3i6u_A          213 DYYIVLELMEGGEL  226 (419)
T ss_dssp             EEEEEEECCTTCBG
T ss_pred             ceEEEEEcCCCCcH
Confidence            67999999998765

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=97.39  E-value=0.00043  Score=62.20  Aligned_cols=75  Identities=16%  Similarity=0.050  Sum_probs=49.3

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.-++.++.|....||+.... ++ .+++|......     ...+..|..+++.+..   -.+.+++..... .+..++|
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~-~~~~~lv  111 (329)
T 3gbz_A           36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH---RNIIELKSVIHH-NHRLHLI  111 (329)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCC---TTBCCEEEEEEE-TTEEEEE
T ss_pred             EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCC---CCcceEEEEEec-CCEEEEE
Confidence            445677888999999999753 33 78899875321     2334577777766642   235555554433 5688999


Q ss_pred             EeeecC
Q 020393          124 MEFIEF  129 (326)
Q Consensus       124 ~e~l~G  129 (326)
                      ||+++|
T Consensus       112 ~e~~~~  117 (329)
T 3gbz_A          112 FEYAEN  117 (329)
T ss_dssp             EECCSE
T ss_pred             EecCCC
Confidence            999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.38  E-value=0.0011  Score=59.95  Aligned_cols=74  Identities=9%  Similarity=-0.163  Sum_probs=34.7

Q ss_pred             EeEeCCccccceEEEEeC--CccEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccC------CCceEEE
Q 020393           54 ICPVGGGCINLASRYGTD--AGSFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP------TGGSYII  123 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~------~~~~~~v  123 (326)
                      .+.++.|..+.||++...  +..+++|.....  .......|...+..+..   -.+.+++......      ....+++
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~~~~lv  104 (360)
T 3e3p_A           28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH---PNIVQLQSYFYTLGERDRRDIYLNVV  104 (360)
T ss_dssp             C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCC---TTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCC---CCcccHHHhhhccccccccceeEEEE
Confidence            456888999999999864  337888976432  22223344444444432   2355555432110      1236899


Q ss_pred             EeeecCC
Q 020393          124 MEFIEFG  130 (326)
Q Consensus       124 ~e~l~G~  130 (326)
                      ||+++|.
T Consensus       105 ~e~~~~~  111 (360)
T 3e3p_A          105 MEYVPDT  111 (360)
T ss_dssp             EECCSCB
T ss_pred             eeccccc
Confidence            9999873

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=97.38  E-value=0.00032  Score=69.23  Aligned_cols=73  Identities=15%  Similarity=0.114  Sum_probs=50.6

Q ss_pred             eEeCCccccceEEEEeC---C-ccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           55 CPVGGGCINLASRYGTD---A-GSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~---~-~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +.++.|....||+....   . ..+.+|+....  .   ...+..|..+++.|..   -.+.+++....  .+..++|||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~--~~~~~lv~E  449 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIVRMIGICE--AESWMLVME  449 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSEEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cCCEEEEEE
Confidence            35899999999997442   2 26888987542  1   2456788888888853   24566666543  356899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|.++
T Consensus       450 ~~~~g~L  456 (635)
T 4fl3_A          450 MAELGPL  456 (635)
T ss_dssp             CCTTEEH
T ss_pred             ccCCCCH
Confidence            9998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.37  E-value=0.00034  Score=68.78  Aligned_cols=72  Identities=14%  Similarity=0.037  Sum_probs=49.7

Q ss_pred             EeCCccccceEEEEeC---Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD---AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~---~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .++.|....||+....   ++ .+.+|.....    ....+..|+.+++.|..   -.+.+++....  .+..++|||++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~h---pniv~l~~~~~--~~~~~lv~E~~  417 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVRLIGVCQ--AEALMLVMEMA  417 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCC---TTBCCEEEEEE--SSSEEEEEECC
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCC---CCEeeEEEEec--cCCeEEEEEeC
Confidence            5888999999997653   22 5888987642    23446678887776632   24566666543  35789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|.++
T Consensus       418 ~~g~L  422 (613)
T 2ozo_A          418 GGGPL  422 (613)
T ss_dssp             TTCBH
T ss_pred             CCCcH
Confidence            98754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=97.36  E-value=0.0016  Score=56.83  Aligned_cols=78  Identities=19%  Similarity=0.168  Sum_probs=46.0

Q ss_pred             ceeeEeEeCCccccceEEEEe--CCc---cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGT--DAG---SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~--~~~---~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-++.++.|..+.||+...  .++   .+++|+....   .   ...+..|...++.+..   -.+++++....  .+
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~--~~   93 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH---RNLIRLYGVVL--TP   93 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SS
T ss_pred             HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCC---CCcccEEEEEc--cC
Confidence            445567789999999999874  233   4788987542   1   2345577777776632   24566666544  34


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++||+++|.++
T Consensus        94 ~~~~v~e~~~~~~L  107 (291)
T 1u46_A           94 PMKMVTELAPLGSL  107 (291)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             CceeeEecccCCCH
Confidence            58999999998654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.35  E-value=0.00082  Score=61.51  Aligned_cols=75  Identities=13%  Similarity=0.127  Sum_probs=47.7

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      .-++.++.|..+.||+....  +..+++|.....  .   ...+..|..+++.+..   -.+.+++......     ...
T Consensus        28 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           28 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH---KNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCC---TTBCCEEEEECSCCSTTTCCE
T ss_pred             eEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCC---CCccceEEeeccccccccccc
Confidence            44567888999999998753  336888986532  1   1234567777766642   2355555443221     136


Q ss_pred             eEEEEeeecC
Q 020393          120 SYIIMEFIEF  129 (326)
Q Consensus       120 ~~~v~e~l~G  129 (326)
                      .++|||+++|
T Consensus       105 ~~lv~e~~~~  114 (371)
T 2xrw_A          105 VYIVMELMDA  114 (371)
T ss_dssp             EEEEEECCSE
T ss_pred             eEEEEEcCCC
Confidence            7999999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.35  E-value=0.00071  Score=60.52  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=44.6

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCcc----hHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPS----MFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~----~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +..-++.++.|..+.||+.... ++ .+++|........    .+..|..  ..++...--.+.+++..... .+..+++
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~--~~~~~~~h~niv~~~~~~~~-~~~~~lv   99 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD--VVMRSSDCPYIVQFYGALFR-EGDCWIC   99 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHH--HHHSSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHH--HHHHcCCCCcEeeeeeEEEe-CCceEEE
Confidence            4455667888999999999874 33 7889987542111    1112222  12222111235555554432 4688999


Q ss_pred             EeeecC
Q 020393          124 MEFIEF  129 (326)
Q Consensus       124 ~e~l~G  129 (326)
                      ||+++|
T Consensus       100 ~e~~~~  105 (327)
T 3aln_A          100 MELMST  105 (327)
T ss_dssp             ECCCSE
T ss_pred             EeecCC
Confidence            999987

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.33  E-value=0.00073  Score=62.08  Aligned_cols=48  Identities=10%  Similarity=-0.052  Sum_probs=32.4

Q ss_pred             eeeEeEeCCccccceEEEEeC-C-ccEEEEecCCCCcchHHHHHHHHHHHH
Q 020393           51 ITKICPVGGGCINLASRYGTD-A-GSFFVKTNRSIGPSMFEGEALGLGAMY   99 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~-~~~vlK~~~~~~~~~~~~E~~~l~~L~   99 (326)
                      -.-.+.++.|..+.||++... + ..+++|...... .....|.++++.+.
T Consensus         9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~E~~il~~l~   58 (383)
T 3eb0_A            9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-RYKNRELDIMKVLD   58 (383)
T ss_dssp             EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHTTCC
T ss_pred             EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHHcC
Confidence            445677899999999999763 3 378889765432 22346888777664

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=97.30  E-value=0.0018  Score=60.74  Aligned_cols=77  Identities=19%  Similarity=0.033  Sum_probs=51.6

Q ss_pred             ceeeEeEeCCccccceEEEEe-CCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           50 HITKICPVGGGCINLASRYGT-DAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~-~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .....+.++.|..+.|+.... ++..+++|............|..+++.+..+  -.+.+++..... .+..|++||+++
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~H--pnIv~l~~~~~~-~~~~~lv~E~~~  101 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEH--PNVIRYFCTEKD-RQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCC--TTBCCEEEEEEE-TTEEEEEEECCS
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCC--CCcCeEEEEEec-CCEEEEEEECCC
Confidence            345556788888888655444 4457899987654445567898888877443  235556655433 467899999997


Q ss_pred             C
Q 020393          129 F  129 (326)
Q Consensus       129 G  129 (326)
                      |
T Consensus       102 g  102 (432)
T 3p23_A          102 A  102 (432)
T ss_dssp             E
T ss_pred             C
Confidence            6

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.29  E-value=0.0015  Score=64.63  Aligned_cols=75  Identities=19%  Similarity=0.121  Sum_probs=49.9

Q ss_pred             eEeEeCCccccceEEEEeCC----c-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           53 KICPVGGGCINLASRYGTDA----G-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~----~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      -.+.++.|....||+.....    + .+.+|......    ...+..|..+++.+..   -.+.+++....  ++..++|
T Consensus       394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~~~~~--~~~~~lv  468 (656)
T 2j0j_A          394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH---PHIVKLIGVIT--ENPVWII  468 (656)
T ss_dssp             EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEE
T ss_pred             EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEe--cCceEEE
Confidence            35668999999999987532    1 47778765422    2345667777776642   23566665542  4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      ||+++|+++
T Consensus       469 ~E~~~~g~L  477 (656)
T 2j0j_A          469 MELCTLGEL  477 (656)
T ss_dssp             EECCTTCBH
T ss_pred             EEcCCCCcH
Confidence            999998754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.24  E-value=0.002  Score=56.99  Aligned_cols=76  Identities=13%  Similarity=0.012  Sum_probs=38.1

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCCc--chHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGP--SMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~--~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      ..-++.++.|....+|++...  +..+++|.......  ...+...+....+....--.+.+++..... .+..+++||+
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv~e~  105 (318)
T 2dyl_A           27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIAMEL  105 (318)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred             ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEEEec
Confidence            345677889999999999874  34789998754321  111111111112222111235666655433 4678999999


Q ss_pred             e
Q 020393          127 I  127 (326)
Q Consensus       127 l  127 (326)
                      +
T Consensus       106 ~  106 (318)
T 2dyl_A          106 M  106 (318)
T ss_dssp             C
T ss_pred             c
Confidence            8

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.23  E-value=0.0021  Score=56.82  Aligned_cols=78  Identities=14%  Similarity=0.107  Sum_probs=45.2

Q ss_pred             cceeeEeEeCCccccceEEEEeCC--ccEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecc---------
Q 020393           49 THITKICPVGGGCINLASRYGTDA--GSFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGA---------  114 (326)
Q Consensus        49 ~~v~~v~~l~~G~~n~~y~v~~~~--~~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---------  114 (326)
                      .+-.-++.++.|....||+.....  ..+++|......   ...+..|..+++.+..   -.+.+++....         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH---DNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCC---CCeeEEEEeccccccccccc
Confidence            345667889999999999998753  378889765432   2335567777766632   22444443211         


Q ss_pred             ----cCCCceEEEEeeecC
Q 020393          115 ----LPTGGSYIIMEFIEF  129 (326)
Q Consensus       115 ----~~~~~~~~v~e~l~G  129 (326)
                          ...+..+++||+++|
T Consensus        88 ~~~~~~~~~~~lv~e~~~~  106 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYMET  106 (320)
T ss_dssp             ---CCSCSEEEEEEECCSE
T ss_pred             cccccccCceeEEeeccCC
Confidence                013577999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=97.21  E-value=0.00043  Score=64.05  Aligned_cols=75  Identities=8%  Similarity=-0.072  Sum_probs=46.4

Q ss_pred             eeEeEeCCccccceEEEEeC-CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc----C-CCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD-AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----P-TGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~----~-~~~~~~v~e  125 (326)
                      .-++.++.|..+.||+.... ++.+++|...... .....|.++++.+..   -.+.+++.....    . ....+++||
T Consensus        43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~-~~~~~E~~il~~l~h---~niv~l~~~~~~~~~~~~~~~~~lv~e  118 (394)
T 4e7w_A           43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-RFKNRELQIMRIVKH---PNVVDLKAFFYSNGDKKDEVFLNLVLE  118 (394)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT-TSCCHHHHHHHTCCC---TTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc-chHHHHHHHHHhCCC---CCcceEEEEEEecCCCCCceEEEEEee
Confidence            34566888999999999874 3467776554321 223468888877753   234455443211    0 123679999


Q ss_pred             eecCC
Q 020393          126 FIEFG  130 (326)
Q Consensus       126 ~l~G~  130 (326)
                      |++|.
T Consensus       119 ~~~~~  123 (394)
T 4e7w_A          119 YVPET  123 (394)
T ss_dssp             CCSEE
T ss_pred             ccCcc
Confidence            99873

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=97.20  E-value=0.0012  Score=59.46  Aligned_cols=73  Identities=15%  Similarity=-0.102  Sum_probs=44.1

Q ss_pred             EeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccC---CCceEEEEeeecCC
Q 020393           56 PVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYIIMEFIEFG  130 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~~v~e~l~G~  130 (326)
                      .++.|....||+....  +..+++|+....  .....|...+..+..  .-.+++++......   .+..+++|||++|.
T Consensus        36 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~e~~~~~~~~~--h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg  111 (336)
T 3fhr_A           36 VLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQASG--GPHIVCILDVYENMHHGKRCLLIIMECMEGG  111 (336)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEESS--HHHHHHHHHHHHHTT--STTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEecCc--HHHHHHHHHHHHhcC--CCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence            4788999999999875  347899987542  222333332222222  23456666543211   23479999999986


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus       112 ~L  113 (336)
T 3fhr_A          112 EL  113 (336)
T ss_dssp             EH
T ss_pred             CH
Confidence            54

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=97.19  E-value=0.0012  Score=59.81  Aligned_cols=76  Identities=17%  Similarity=0.077  Sum_probs=47.5

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccCC-----C
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPT-----G  118 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~-----~  118 (326)
                      -...+.++.|....||+.... ++ .+++|......     ...+..|..+++.+..   -.+.+++.......     .
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH---ENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCSSGGGCC
T ss_pred             EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCC---CCcccHhheEecccccccce
Confidence            345677888999999999764 33 78899875421     1234567777776642   23444444332211     2


Q ss_pred             ceEEEEeeecC
Q 020393          119 GSYIIMEFIEF  129 (326)
Q Consensus       119 ~~~~v~e~l~G  129 (326)
                      ..+++||+++|
T Consensus       103 ~~~lv~e~~~~  113 (353)
T 3coi_A          103 DFYLVMPFMQT  113 (353)
T ss_dssp             CCEEEEECCSE
T ss_pred             eEEEEeccccC
Confidence            35999999986

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=97.15  E-value=0.0017  Score=59.42  Aligned_cols=79  Identities=15%  Similarity=0.054  Sum_probs=44.8

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----C
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----T  117 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~  117 (326)
                      .-.-++.++.|..+.||+.... ++ .+++|......     ...+..|..+++.+..   -.+.+++......     .
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH---ENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCSSGGGC
T ss_pred             ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEecCCccccC
Confidence            3455678899999999999753 33 78889875421     2334567777777753   1244444432211     2


Q ss_pred             CceEEEEeeecCCCC
Q 020393          118 GGSYIIMEFIEFGSS  132 (326)
Q Consensus       118 ~~~~~v~e~l~G~~~  132 (326)
                      +..++++++. |.++
T Consensus       107 ~~~~lv~e~~-~~~L  120 (367)
T 2fst_X          107 NDVYLVTHLM-GADL  120 (367)
T ss_dssp             CCCEEEEECC-CEEC
T ss_pred             CeEEEEeccc-CCCH
Confidence            4678999888 4444

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=97.14  E-value=0.00065  Score=63.42  Aligned_cols=74  Identities=8%  Similarity=-0.064  Sum_probs=45.9

Q ss_pred             eeEeEeCCccccceEEEEeC--CccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecc--cC-C--CceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD--AGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA--LP-T--GGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~--~~-~--~~~~~v~  124 (326)
                      .-.+.++.|....||+....  +..+.+|...... .....|.++++.|...   .+.+++....  .. .  ...+++|
T Consensus        57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~E~~il~~l~hp---niv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHC---NIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHHTCCCT---TBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-hhHHHHHHHHHHcCCC---CccceeeEEeccCCCCcceeEEeeh
Confidence            34566888999999999874  3368888765432 2344688888777432   2444433211  11 1  2357899


Q ss_pred             eeecC
Q 020393          125 EFIEF  129 (326)
Q Consensus       125 e~l~G  129 (326)
                      ||++|
T Consensus       133 e~~~~  137 (420)
T 1j1b_A          133 DYVPE  137 (420)
T ss_dssp             ECCCE
T ss_pred             hcccc
Confidence            99986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=97.13  E-value=0.00038  Score=61.88  Aligned_cols=78  Identities=9%  Similarity=-0.059  Sum_probs=50.9

Q ss_pred             ceeeEeEeCCccccceEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           50 HITKICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      +..-.+.++.|..+.||+.... +.+++|.....     ....+..|..+++.+..   -.+.+++..... .+..+++|
T Consensus        34 ~~~~~~~lg~G~~g~V~~~~~~-~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~-~~~~~iv~  108 (319)
T 2y4i_B           34 QLEIGELIGKGRFGQVYHGRWH-GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH---ENVVLFMGACMS-PPHLAIIT  108 (319)
T ss_dssp             CEECCCBCCCSSSSEEEEEEES-SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC---TTBCCCCEEEEC-SSCEEEEC
T ss_pred             HeEEeeEeccCCceEEEEEEEc-CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC---CCEeEEEEEEec-CCceEEEe
Confidence            4455667888999999998764 46888876531     22345567766665532   234555554432 46789999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      |+++|.++
T Consensus       109 e~~~~~~L  116 (319)
T 2y4i_B          109 SLCKGRTL  116 (319)
T ss_dssp             BCCCSEEH
T ss_pred             ecccCCcH
Confidence            99998644

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=96.90  E-value=0.0019  Score=63.83  Aligned_cols=75  Identities=16%  Similarity=0.106  Sum_probs=49.0

Q ss_pred             eEeCCccccceEEEEeC--CccEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeeccc-----CCCceEEE
Q 020393           55 CPVGGGCINLASRYGTD--AGSFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGAL-----PTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~-----~~~~~~~v  123 (326)
                      +.++.|..+.||+....  +..+++|..... .   ...+..|.++++.+..   -.+.+++.....     ..+..+++
T Consensus        20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~H---pnIV~l~~v~~~~~~~~~~~~~~LV   96 (676)
T 3qa8_A           20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH---PNVVSAREVPDGLQKLAPNDLPLLA   96 (676)
T ss_dssp             CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCB---TTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCC---CCCCceeeeecccccccCCCeEEEE
Confidence            45788888999998653  337899987642 1   2345678888887743   224444443221     14577999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |||++|.++
T Consensus        97 mEy~~ggsL  105 (676)
T 3qa8_A           97 MEYCEGGDL  105 (676)
T ss_dssp             EECCSSCBH
T ss_pred             EEeCCCCCH
Confidence            999998754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=96.88  E-value=0.0021  Score=58.35  Aligned_cols=79  Identities=10%  Similarity=-0.061  Sum_probs=50.9

Q ss_pred             eeeEeEeCCccccceEEEEeC--CccEEEEecCCCC--cchHHHHHHHHHHHHhcC--------CCCCcceeeecccC--
Q 020393           51 ITKICPVGGGCINLASRYGTD--AGSFFVKTNRSIG--PSMFEGEALGLGAMYETR--------TIRAPRPFKVGALP--  116 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~--~~~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~--------~~~vP~~~~~~~~~--  116 (326)
                      -.-++.++.|..+.||+....  +..+++|+.....  ...+..|..+++.+....        .-.+++++......  
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~  100 (373)
T 1q8y_A           21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP  100 (373)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred             EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence            445667888999999999853  3378999986431  344678888888887421        01345555443221  


Q ss_pred             -CCceEEEEeeecCC
Q 020393          117 -TGGSYIIMEFIEFG  130 (326)
Q Consensus       117 -~~~~~~v~e~l~G~  130 (326)
                       ....+++||++ |.
T Consensus       101 ~~~~~~lv~e~~-~~  114 (373)
T 1q8y_A          101 NGVHVVMVFEVL-GE  114 (373)
T ss_dssp             TEEEEEEEECCC-CE
T ss_pred             CCceEEEEEecC-CC
Confidence             12678999988 43

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=93.58  E-value=0.026  Score=52.32  Aligned_cols=27  Identities=22%  Similarity=0.172  Sum_probs=24.5

Q ss_pred             cceeecCCCCCCeeecCCCCeEEEccc
Q 020393          224 PCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       224 ~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      ..+||+|++|.|||++.++...|+||.
T Consensus       230 ~~iiHrDiKp~NILl~~~~~~kL~DFG  256 (413)
T 3dzo_A          230 YGLVHTYLRPVDIVLDQRGGVFLTGFE  256 (413)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred             CCcccCCcccceEEEecCCeEEEEecc
Confidence            479999999999999998888999974

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=87.48  E-value=3.3  Score=36.94  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=48.5

Q ss_pred             eeeEeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc---------------
Q 020393           51 ITKICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---------------  115 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---------------  115 (326)
                      +..++...+| ...+|.+.++++.||||..+     .+..|.-. ..|+...++|+|..-.....               
T Consensus        71 v~~I~~s~~G-stgvff~~td~~~~VVK~s~-----~l~~E~l~-s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~  143 (342)
T 1cja_A           71 FKGIERSEKG-TEGLFFVETESGVFIVKRST-----NIESETFC-SLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID  143 (342)
T ss_dssp             EEEEEECCST-TSCEEEEEESSCEEEEECCT-----THHHHHHH-HHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred             eeEEEeccCC-CCCeEEEEeCCCEEEEeCcH-----HHHHHHHH-HHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence            4455666666 46788888888899999542     23455543 34555568999984432211               


Q ss_pred             C---------CCceEEEEeeecCCCC
Q 020393          116 P---------TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       116 ~---------~~~~~~v~e~l~G~~~  132 (326)
                      .         ++..+++|+|++|..+
T Consensus       144 ~~~~~l~~l~~~~~~l~meyv~G~~L  169 (342)
T 1cja_A          144 KSFRVITTLANQANILLMELVRGITL  169 (342)
T ss_dssp             SSSCHHHHHTTCSEEEEEECCCEEES
T ss_pred             hhhHHHHHhhcccceehhhhcCCCcc
Confidence            0         2356799999999775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	326
d2pula1	392	d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {	3e-10
d1nd4a_	255	d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferas	9e-10
d1j7la_	263	d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phos	2e-06
d1zyla1	325	d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId:	5e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.002

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

 Score = 58.3 bits (140), Expect = 3e-10
 Identities = 39/302 (12%), Positives = 75/302 (24%), Gaps = 43/302 (14%)

Query: 30  FATLSDDPIREWILSEG--KATHITKICPVGGGCINLASRYGTDAG--SFFVK----TNR 81
           + TL++       +  G   +        +G G +N            +  +K      +
Sbjct: 5   YETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAK 64

Query: 82  SIGPSMF------EGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSRGN 135
            +G S          E+  L    E      PR F         +  +ME +        
Sbjct: 65  VVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT---EMAVTVMEDLSHLKIARK 121

Query: 136 Q---------------SVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF 180
                              GK L          K     V                + + 
Sbjct: 122 GLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDP 181

Query: 181 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDK 240
           + +H      +                     L   F        L+HGDL +G+I + +
Sbjct: 182 FFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFL--TSAETLIHGDLHTGSIFASE 239

Query: 241 NGEPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDLYMLYHYLN 300
           +   VI     +YG    + G      F  + + +       + G ++      +     
Sbjct: 240 HETKVIDPEFAFYGPIGFDVGQ-----FIANLFLNALS----RDGADREPLYEHVNQVWE 290

Query: 301 HY 302
            +
Sbjct: 291 TF 292

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

 Score = 56.2 bits (134), Expect = 9e-10
 Identities = 33/253 (13%), Positives = 64/253 (25%), Gaps = 32/253 (12%)

Query: 56  PVGGGCINLAS-RYGTDAGS-FFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVG 113
               GC + A  R         FVKT+ S   +  + EA  L  +  T  +       V 
Sbjct: 17  QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTG-VPCAAVLDVV 75

Query: 114 ALPTGGSYIIMEFIEFGSSRGNQ-------SVFGKKLAEMHKAGKSSKGFGFDVDNTIGS 166
                  ++++  +       +        S+    +  +H    ++  F     + I  
Sbjct: 76  TEAGRD-WLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIER 134

Query: 167 TPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCL 226
                +      +   E   G                    RL   +    +       +
Sbjct: 135 ARTRMEAGLVDQDDLDEEHQGLAPAELFA------------RLKARMPDGED-----LVV 177

Query: 227 LHGDLWSGNISSDKNGEPVILD-PACYYGHNEAEFG---MSWCAGFGGSFYNSYFEVMPK 282
            HGD    NI  +       +D           +            GG + + +  +   
Sbjct: 178 THGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEWADRFLVLYGI 237

Query: 283 QPGFEKRRDLYML 295
                +R   Y L
Sbjct: 238 AAPDSQRIAFYRL 250

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 23/221 (10%), Positives = 54/221 (24%), Gaps = 33/221 (14%)

Query: 58  GGGCINLASRYGTDAGSFFVKTNRSIGPS---MFEGEALGLGAMYETRTIRAPRPFKVGA 114
            G       +   +  + ++K   S         E E   +  +     +  P+      
Sbjct: 23  EGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK--LPVPKVLHFER 80

Query: 115 LPTGGSYIIMEFIEFGSSRGNQ----------SVFGKKLAEMHKAGKSSKGFGFDVDNTI 164
              G S ++M   +                   ++ + +   H    S   +   +D+ +
Sbjct: 81  -HDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRL 139

Query: 165 GSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEP 224
                        +++   + L        ++       +  +  +K   P       E 
Sbjct: 140 A-----------ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP-----EEEL 183

Query: 225 CLLHGDLWSGNISSDKNGEPVILD-PACYYGHNEAEFGMSW 264
              HGDL   NI          +D           +     
Sbjct: 184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCV 224

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

 Score = 39.0 bits (90), Expect = 5e-04
 Identities = 41/280 (14%), Positives = 73/280 (26%), Gaps = 44/280 (15%)

Query: 29  TFATLSDDPIREWILSEGKATHITKICPVGGGCINLAS------RYGTDAGS-FFVKTNR 81
           TF TL  D I + +   G          V  G   L S      ++  +    F VK  R
Sbjct: 4   TFQTLHPDTIMDALFEHG--------IRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYR 55

Query: 82  SIGPS--MFEGEALGLGAMYETRT-IRAPRPFKVGALPTGGSYIIMEFIEFG------SS 132
               +      E      +      + AP  F    L     +    F   G       +
Sbjct: 56  PERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADN 115

Query: 133 RGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKL 192
                  G+ L  MH+ G+                 +  K   +     +  +  +    
Sbjct: 116 IDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKAT 175

Query: 193 ALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPACY 252
                           L+  +   +   +     LHGD  +GNI    +G   +      
Sbjct: 176 D--------------ELIAAVTAHWRE-DFTVLRLHGDCHAGNILWR-DGPMFVDLDDAR 219

Query: 253 YGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGFEKRRDL 292
            G   A   +        +      E + +   +E+  + 
Sbjct: 220 NGP--AVQDLWMLLNGDKAEQRMQLETIIE--AYEEFSEF 255

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 0.002
 Identities = 24/170 (14%), Positives = 56/170 (32%), Gaps = 12/170 (7%)

Query: 158 FDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLF 217
            ++  T  S     K +   +  + EH L   L   L ++  S I +    L+  L  + 
Sbjct: 75  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 134

Query: 218 EGVNVEPCLLHGDLWSGNISSDKNGEPVILD--PACYYGHNEAEFGMSWCAGFGGSFYNS 275
                   +LH D+ + N+   ++G   + D   A  +   +     +       + +  
Sbjct: 135 R-----NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-PNRYTNRVVTLWYR 188

Query: 276 YFEVMPKQPGFEKRRDLY----MLYHYLNHYNLFGSGYRSSALSIIDDYL 321
             E++  +  +    DL+    ++        +         L++I    
Sbjct: 189 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 238

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	326
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	99.96
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	99.94
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.89
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	99.88
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	99.75
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.73
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.62
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.51
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.5
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.44
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.43
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.41
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.38
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.36
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.33
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	98.33
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.32
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.31
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.3
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.29
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.28
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.27
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.26
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.23
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.22
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.21
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.18
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.16
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.15
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.12
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.1
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.1
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.08
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.07
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.06
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.06
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.04
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.04
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.02
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.02
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.01
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.01
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.91
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.89
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.86
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.85
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.84
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	97.82
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.8
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.8
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	97.79
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.78
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.77
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.74
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	97.74
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	97.72
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.69
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.68
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.65
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.65
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.59
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.58
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.57
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	97.57
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	96.15
d1cjaa_	342	Actin-fragmin kinase, catalytic domain {Physarum p	93.79

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.96  E-value=8.8e-28  Score=216.66  Aligned_cols=242  Identities=14%  Similarity=0.161  Sum_probs=170.4

Q ss_pred             cCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcce
Q 020393           31 ATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRP  109 (326)
Q Consensus        31 ~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~  109 (326)
                      |+++.++|+.+|.++++| ++.+++++.+|..|++|+|++++|+||||+++. .+...+..|.+++.+|++. ++|||.|
T Consensus         1 T~ls~~el~~~l~~Y~lg-~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~~~~~l~~~~~~l~~L~~~-g~pvp~p   78 (316)
T d2ppqa1           1 TDITEDELRNFLTQYDVG-SLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAK-GLSCPLP   78 (316)
T ss_dssp             CCCCHHHHHHHHTTBCCC-CEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHT-TCCCCCB
T ss_pred             CCCCHHHHHHHHHhCCCC-CceEeecCCCCcccCeEEEEECCCcEEEEEcCCCCCHHHHHHHHHHHHhhhhc-ccccccc
Confidence            789999999999998887 799999999999999999999999999999875 3456778899999999987 6899999


Q ss_pred             eeecccC-----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHH
Q 020393          110 FKVGALP-----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEF  180 (326)
Q Consensus       110 ~~~~~~~-----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~  180 (326)
                      +......     .+..+.++.++.|....    .....+|..++++|.....   +..+.+         ..+...|...
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~  146 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEG---FEIKRP---------NALSVDGWKV  146 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTT---CCCCCB---------CTTSHHHHHH
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhh---cccccc---------cccchhhcch
Confidence            8765432     57889999999997653    5678999999999999874   322211         1111111111


Q ss_pred             HHHhhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhh
Q 020393          181 YAEHRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAE  259 (326)
Q Consensus       181 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~D  259 (326)
                      ..     ...... .........+.+....+........ ..+.++||||++++||+++++++.+|||| +|+.|++++|
T Consensus       147 ~~-----~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~-~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~~~~~D  219 (316)
T d2ppqa1         147 LW-----DKSEER-ADEVEKGLREEIRPEIDYLAAHWPK-DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYD  219 (316)
T ss_dssp             HH-----HHHGGG-GGGTSTTHHHHHHHHHHHHHHHCCC-SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHH
T ss_pred             hh-----hHHHHh-hhhcchhHHHHHHHHHHhhhccCcc-ccccccccCCcchhhhhcccccceeEecccccccchhhhh
Confidence            10     000000 0111222333344444333322222 47889999999999999998877899998 6999999999


Q ss_pred             hhhh---hhc----CCC----hHhHHHhhhhCCCCcCHHHHHHHH
Q 020393          260 FGMS---WCA----GFG----GSFYNSYFEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       260 la~~---~~~----~~~----~~fl~~Y~~~~~l~~~~~~r~~~y  293 (326)
                      ||++   ||.    .+.    .+|++||++.+|+++.-.+-++.+
T Consensus       220 LAi~~~~~~~~~~~~~~~~~~~afl~GY~~~rpLs~~E~~~l~~~  264 (316)
T d2ppqa1         220 VSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLL  264 (316)
T ss_dssp             HHHHHHHHSBCTTSCBCHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhhcchhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            9975   331    122    479999999999997555555554

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.1e-27  Score=212.72  Aligned_cols=239  Identities=17%  Similarity=0.167  Sum_probs=164.9

Q ss_pred             ccCCCchhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCC
Q 020393           30 FATLSDDPIREWILSEGKATHITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRA  106 (326)
Q Consensus        30 ~~~~~~~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~v  106 (326)
                      |+.+++|.|.+.|.+.|+.. -..+.++ +|..|.||+|++++| +||+|++++.  +.+.+..|.+++.+|++. ++||
T Consensus         5 f~~L~pd~i~~al~~~g~~~-~~~~~~L-~s~EN~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~-gipv   81 (325)
T d1zyla1           5 FQTLHPDTIMDALFEHGIRV-DSGLTPL-NSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVND-EVPV   81 (325)
T ss_dssp             CCCCCHHHHHHHHHHTTCCC-CSCCEEE-CCSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT-TCSB
T ss_pred             ccccCHHHHHHHHHHcCCCC-CcCcccc-ccccceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhc-CCCC
Confidence            46688999999998886542 2345666 478999999999877 6999999763  456688899999999987 6999


Q ss_pred             cceeeecccC----CCceEEEEeeecCCCCC----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHH
Q 020393          107 PRPFKVGALP----TGGSYIIMEFIEFGSSR----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWI  178 (326)
Q Consensus       107 P~~~~~~~~~----~~~~~~v~e~l~G~~~~----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~  178 (326)
                      |.|+..+...    ++..+.+++|++|..+.    ...+++|+.||+||.....   +.++..           ...++.
T Consensus        82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~---~~~~~r-----------~~~d~~  147 (325)
T d1zyla1          82 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRK---QLFIHR-----------PTIGLN  147 (325)
T ss_dssp             CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTS---SCCSSS-----------CBCSHH
T ss_pred             CCceecCCCeeeeeeeEEEEEEeecCCcCCCCCCHHHHHHHHHHHHHHHhhccc---CCcccc-----------CCCCHH
Confidence            9998765332    57899999999998763    4679999999999998864   221111           011222


Q ss_pred             HHHHHhhhHHHHHHHHh-hcCCh----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccc
Q 020393          179 EFYAEHRLGYQLKLALD-QYGDS----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACY  252 (326)
Q Consensus       179 ~~~~~~~l~~~~~~~~~-~~~~~----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~  252 (326)
                      .+...  ....   ..+ ...+.    ...+.++++.+.+...... ..+.++||||+|++|||+++ + ..+||| +|+
T Consensus       148 ~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~  219 (325)
T d1zyla1         148 EYLIE--PRKL---FEDATLIPSGLKAAFLKATDELIAAVTAHWRE-DFTVLRLHGDCHAGNILWRD-G-PMFVDLDDAR  219 (325)
T ss_dssp             HHTHH--HHHH---HHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS-CSCCEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred             HHhhh--hHHH---HHHcCcCCHHHHHHHHHHHHHHHHHHHHhccc-cCCceeecCCCCcccEEEeC-C-ceEEechhcc
Confidence            22111  1111   111 11121    2344455555555544433 46789999999999999964 3 579998 699


Q ss_pred             cCchhhhhhhhhhc---C---CChHhHHHhhhhCCCCcCHHHHHHHH
Q 020393          253 YGHNEAEFGMSWCA---G---FGGSFYNSYFEVMPKQPGFEKRRDLY  293 (326)
Q Consensus       253 ~G~~~~Dla~~~~~---~---~~~~fl~~Y~~~~~l~~~~~~r~~~y  293 (326)
                      +|++++||+++...   .   .-++|++||++.+|+++.....+...
T Consensus       220 ~g~~~~DLa~~l~~~~~~~~~~~~~~l~GY~~~~~l~~~el~~i~~l  266 (325)
T d1zyla1         220 NGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPL  266 (325)
T ss_dssp             EECTTHHHHTTCCSSHHHHHHHHHHHHHHHTTTSCCCGGGGGGHHHH
T ss_pred             cCcHHHHHHHhccccccCHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            99999999975311   1   12479999999999987655544444

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=99.92  E-value=3.7e-25  Score=192.79  Aligned_cols=214  Identities=16%  Similarity=0.158  Sum_probs=142.9

Q ss_pred             eEeEeCCcccc-ceEEEEeCCc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           53 KICPVGGGCIN-LASRYGTDAG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        53 ~v~~l~~G~~n-~~y~v~~~~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      +++++.+|.++ .+||++++++ .+|+|..+......+..|.+++++|+.. ++|||+++..... ++..|+||++++|.
T Consensus        14 ~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~-gvpvP~v~~~~~~-~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          14 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATT-GVPCAAVLDVVTE-AGRDWLLLGEVPGQ   91 (255)
T ss_dssp             EEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTT-TCCBCCEEEEEEC-SSCEEEEEECCSSE
T ss_pred             ceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHHHHHhc-CCCCCceeeeccc-ccceEEEEEeeecc
Confidence            56788888876 6799998777 6999999876666788999999999986 7999999987654 57899999999998


Q ss_pred             CCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhh--cCCh-
Q 020393          131 SSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQ--YGDS-  200 (326)
Q Consensus       131 ~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~--~~~~-  200 (326)
                      ++.       ....++|+.|++||+.....  .++.               ..+......  ...........  .... 
T Consensus        92 ~~~~~~~~~~~~~~~l~~~la~LH~~~~~~--~~~~---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~  152 (255)
T d1nd4a_          92 DLLSSHLAPAEKVSIMADAMRRLHTLDPAT--CPFD---------------HQAKHRIER--ARTRMEAGLVDQDDLDEE  152 (255)
T ss_dssp             ETTTSCCCHHHHHHHHHHHHHHHTTSCGGG--CCCB---------------CCHHHHHHH--HHHHHHTTCCCTTSCCGG
T ss_pred             ccccccccHHHHHHHHHHHHHHHccCChhh--CCCc---------------ccchhhHHH--HHHHHHHhhhccccccch
Confidence            753       24689999999999987632  2110               011111110  00000000000  0011 


Q ss_pred             ----HHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhhh--h-cCC----
Q 020393          201 ----TIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMSW--C-AGF----  268 (326)
Q Consensus       201 ----~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~~--~-~~~----  268 (326)
                          ...+.+..+.+..   ..  ..++++||||+|++|||+++++.++|||| .+.+|||++||+++.  + ..+    
T Consensus       153 ~~~~~~~~~~~~l~~~~---~~--~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g~~~~Dla~~~~~~~~~~~~~~  227 (255)
T d1nd4a_         153 HQGLAPAELFARLKARM---PD--GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIALATRDIAEELGGEW  227 (255)
T ss_dssp             GTTCCHHHHHHHHHHTC---CS--SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEETHHHHHHHHHHHHHHHCHHH
T ss_pred             hhhhHHHHHHHHHHHhC---Cc--cCCceEEeCCCCCcceEEeCCceEEEEEchhcccCCHHHHHHHHHHHhhhcCCHHH
Confidence                1122233332221   11  35789999999999999988776899997 588999999999752  1 122    


Q ss_pred             ChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          269 GGSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       269 ~~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      .+.|+++|....   .+ .+|+.+|+++
T Consensus       228 ~~~~~~~yg~~~---~d-~~r~~~y~ll  251 (255)
T d1nd4a_         228 ADRFLVLYGIAA---PD-SQRIAFYRLL  251 (255)
T ss_dssp             HHHHHHHHTCSS---CC-HHHHHHHHHH
T ss_pred             HHHHHHHcCCCC---CC-HHHHHHHHHH
Confidence            356778885432   23 4788888765

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.89  E-value=1.3e-23  Score=183.68  Aligned_cols=226  Identities=15%  Similarity=0.121  Sum_probs=142.0

Q ss_pred             hhHHHHHHhcCCCcceeeEeEeCCccccceEEEEeCCccEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           36 DPIREWILSEGKATHITKICPVGGGCINLASRYGTDAGSFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        36 ~~i~~~l~~~~~~~~v~~v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      .++.+++.+.      ..+....|+..+.+|+|++++++||+|+.+..   ....+..|..++++|++  .+|||+++..
T Consensus         7 ~~l~~~~~~~------~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~--~vpvP~vl~~   78 (263)
T d1j7la_           7 PELKKLIEKY------RCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG--KLPVPKVLHF   78 (263)
T ss_dssp             HHHHHHHTTS------EEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT--TSCCCCEEEE
T ss_pred             HHHHHhhhce------EEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc--cCCCCcEEEE
Confidence            4566666433      22233334455689999998899999998642   23457889999999976  5899999987


Q ss_pred             cccCCCceEEEEeeecCCCC-----C-----CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHH
Q 020393          113 GALPTGGSYIIMEFIEFGSS-----R-----GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYA  182 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~~~-----~-----~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~  182 (326)
                      +.. ++..++||++++|.+.     .     ....++|+.+++||+...+.  .+...            +..   ....
T Consensus        79 ~~~-~~~~~lv~~~l~G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~~--~~~~~------------~~~---~~~~  140 (263)
T d1j7la_          79 ERH-DGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISD--CPYTN------------SLD---SRLA  140 (263)
T ss_dssp             EEE-TTEEEEEEECCSSEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCCTT--CSCBC------------CHH---HHHH
T ss_pred             Eec-CCceEEEEEecccccccccccccccHHHHHHHHHHHHHHHhccCccc--cccCc------------chh---hhhh
Confidence            654 5789999999999764     1     23578899999999987532  21110            000   0000


Q ss_pred             HhhhHHHHHHHHhh-----cCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEcc-ccccCch
Q 020393          183 EHRLGYQLKLALDQ-----YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDP-ACYYGHN  256 (326)
Q Consensus       183 ~~~l~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~-~~~~G~~  256 (326)
                        ............     ..........+++.+.+.....  ..++++||||+|++|||+++++.++|||| ++.+|+|
T Consensus       141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~  216 (263)
T d1j7la_         141 --ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP--EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADK  216 (263)
T ss_dssp             --HHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCC--CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEEH
T ss_pred             --hHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCC--cCCcEEEEeeccCcceeecCCceEEEeechhcccCCH
Confidence              011111000000     0000011122333333332222  35679999999999999998777799997 6899999


Q ss_pred             hhhhhhhhh-----cC---CChHhHHHhhhhCCCCcCHHHHHHHHHHH
Q 020393          257 EAEFGMSWC-----AG---FGGSFYNSYFEVMPKQPGFEKRRDLYMLY  296 (326)
Q Consensus       257 ~~Dla~~~~-----~~---~~~~fl~~Y~~~~~l~~~~~~r~~~y~l~  296 (326)
                      .+|||.+..     .+   ..+.|+++|.    +..+ .+|+.+|+++
T Consensus       217 ~~Dla~~~~~~~~~~~~~~~~~~fl~~Yg----~~~d-~~~l~~y~~l  259 (263)
T d1j7la_         217 WYDIAFCVRSIREDIGEEQYVELFFDLLG----IKPD-WEKIKYYILL  259 (263)
T ss_dssp             HHHHHHHHHHHHHHCSCTHHHHHHHHHHT----SCCC-HHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccCCHHHHHHHHHHcC----CCCC-HHHHHHHHHH
Confidence            999997531     11   2257999996    2233 3678888765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=99.88  E-value=1.4e-22  Score=187.84  Aligned_cols=221  Identities=16%  Similarity=0.163  Sum_probs=138.6

Q ss_pred             cccccCCCchhHHHHHHhcCC--CcceeeEeEeCCccccceEEEEeCCc--cEEEEecCCC----------CcchHHHHH
Q 020393           27 RRTFATLSDDPIREWILSEGK--ATHITKICPVGGGCINLASRYGTDAG--SFFVKTNRSI----------GPSMFEGEA   92 (326)
Q Consensus        27 ~~~~~~~~~~~i~~~l~~~~~--~~~v~~v~~l~~G~~n~~y~v~~~~~--~~vlK~~~~~----------~~~~~~~E~   92 (326)
                      .|.|.+++.+.+.++..+.|.  +....+++++++|..|.+|||+..++  .+|+|.+++.          +......|+
T Consensus         2 ~~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~   81 (392)
T d2pula1           2 TPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIES   81 (392)
T ss_dssp             CCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCCCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHH
Confidence            367899999999999888753  33556789999999999999987654  7999987641          123456799


Q ss_pred             HHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC-----------CCcHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 020393           93 LGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS-----------RGNQSVFGKKLAEMHKAGKSSKGFGFDVD  161 (326)
Q Consensus        93 ~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~-----------~~~~~~lg~~La~lH~~~~~~~~fg~~~~  161 (326)
                      ++|+.+++..+.+||+++..+.   ...+++||+++|...           ...+.++|+.|+++|......   .....
T Consensus        82 ~~L~~~~~~~p~~vP~v~~~d~---~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~---~~~~~  155 (392)
T d2pula1          82 SALIRQGEHVPHLVPRVFYSDT---EMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDY---ALEPK  155 (392)
T ss_dssp             HHHHHHHTTCGGGSCCEEEEET---TTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTT---TSCHH
T ss_pred             HHHHHhhhhCCCCcceEEEEcC---CCCEEEEeccCCcccchhhhcccchhHHHHHHHHHHHHHHHHHhccc---cccch
Confidence            9999998877788999999874   577999999988542           255789999999999876531   11100


Q ss_pred             Cccccc-ccCCCCCccHHHHHH--H-----------hhhHHHHHHHHhhcCChHHHHHHHHHHHHhcccccCCCCCccee
Q 020393          162 NTIGST-PQINKWTSNWIEFYA--E-----------HRLGYQLKLALDQYGDSTIYQRGHRLMKNLAPLFEGVNVEPCLL  227 (326)
Q Consensus       162 ~~~~~~-~~~~~~~~~w~~~~~--~-----------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~Li  227 (326)
                      ...... ...|.....|.....  .           .......+..   ..+..+...+.++...    +.  ..+.+||
T Consensus       156 ~~~~~~~~~~n~~l~~~~e~~~~~~py~~~~~~~~~~~~~~~~~~l---~~d~~l~~~~~~l~~~----~~--~~~~~Li  226 (392)
T d2pula1         156 VKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKL---WNNDSVKIEAAKLKKS----FL--TSAETLI  226 (392)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHH---HTCHHHHHHHHHHHHH----HH--HBCCEEE
T ss_pred             hhcccccccccHHHHHHHHhhhcchHHHHHHHhhcchhhhHHHHhh---hhhHHHHHHHHHHHhh----cc--cCCccee
Confidence            000000 000100001100000  0           0000000000   0111122222222222    21  2467999


Q ss_pred             ecCCCCCCeeecCCCCeEEEcc-ccccCchhhhhhhh
Q 020393          228 HGDLWSGNISSDKNGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       228 HgDl~~~NiL~~~~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      |||||+||||+++++ ++|||| .+.+|+|.+||+.+
T Consensus       227 HGDl~~gNIlv~~~~-~~vID~E~a~~G~~~~Dlg~~  262 (392)
T d2pula1         227 HGDLHTGSIFASEHE-TKVIDPEFAFYGPIGFDVGQF  262 (392)
T ss_dssp             CSCCCGGGEEECSSC-EEECCCTTCEEECTHHHHHHH
T ss_pred             ccCCcCCceeEcCCc-eEEechhhcccCCHHHHHHHH
Confidence            999999999998765 899997 68999999999965

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=1.1e-17  Score=154.49  Aligned_cols=199  Identities=16%  Similarity=0.104  Sum_probs=127.7

Q ss_pred             hhHHHHHHhc-C-----CCcceeeEeEeCCccccceEEEEeCCc---------cEEEEecCCC-CcchHHHHHHHHHHHH
Q 020393           36 DPIREWILSE-G-----KATHITKICPVGGGCINLASRYGTDAG---------SFFVKTNRSI-GPSMFEGEALGLGAMY   99 (326)
Q Consensus        36 ~~i~~~l~~~-~-----~~~~v~~v~~l~~G~~n~~y~v~~~~~---------~~vlK~~~~~-~~~~~~~E~~~l~~L~   99 (326)
                      +.+++++++. +     ...+..+|++++||.+|.+|+|+.+++         ++++|++... .......|..+++.|+
T Consensus        23 ~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls  102 (395)
T d1nw1a_          23 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS  102 (395)
T ss_dssp             HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHH
Confidence            3345566653 2     234568999999999999999997643         5899998742 2223467999999999


Q ss_pred             hcCCCCCcceeeecccCCCceEEEEeeecCCCCC-------CcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCC
Q 020393          100 ETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSSR-------GNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINK  172 (326)
Q Consensus       100 ~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~~-------~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~  172 (326)
                      +. ++ +|++++.+.     .+.|++|++|..+.       .....+++.|+++|....+.  ..  ...          
T Consensus       103 ~~-gl-~Pkll~~~~-----~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~--~~--~~~----------  161 (395)
T d1nw1a_         103 ER-HL-GPKLYGIFS-----GGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPI--WK--EPD----------  161 (395)
T ss_dssp             HT-TS-SSCEEEEET-----TEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSS--CC--SSC----------
T ss_pred             hC-CC-CCeEEEEcC-----CceEEEEeccccCChhhccchhhhHHHHHHHHHHhhccccc--cc--Ccc----------
Confidence            86 55 899999874     38999999998763       34689999999999987531  10  000          


Q ss_pred             CCccHHHHHHHhhhHHHHHHHHhh-------------cCChHHHHHHHHHHHHhcccccCCCCCcceeecCCCCCCeeec
Q 020393          173 WTSNWIEFYAEHRLGYQLKLALDQ-------------YGDSTIYQRGHRLMKNLAPLFEGVNVEPCLLHGDLWSGNISSD  239 (326)
Q Consensus       173 ~~~~w~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~  239 (326)
                        ..|.      .+..+++.....             .........+.+.++.+...+.....+.++||+|++++|||+.
T Consensus       162 --~~~~------~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~  233 (395)
T d1nw1a_         162 --YLCE------ALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLP  233 (395)
T ss_dssp             --HHHH------HHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEE
T ss_pred             --hHHH------HHHHHHHhhhhhhhHHHhhhhhhhhccccccHHHHHHHHHHHHHHhhcccCCeeEEecCCCcccEeec
Confidence              0110      111222111110             0000001112222222333333335678999999999999985


Q ss_pred             C----------------------------CCCeEEEcc-ccccCchhhhhhhh
Q 020393          240 K----------------------------NGEPVILDP-ACYYGHNEAEFGMS  263 (326)
Q Consensus       240 ~----------------------------~~~~~iID~-~~~~G~~~~Dla~~  263 (326)
                      +                            ++...+||| .+++|++.+|||..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~~fDian~  286 (395)
T d1nw1a_         234 KASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANH  286 (395)
T ss_dssp             C------------------------------CCEECCCTTCEEEEHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccCCCCcEEEEeecccCCCcchhhHHHH
Confidence            3                            345789996 79999999999954

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.73  E-value=2.8e-08  Score=81.10  Aligned_cols=68  Identities=16%  Similarity=0.168  Sum_probs=44.9

Q ss_pred             eEeCCccccceEEEEeCCc-cEEEEecCCCC------c---------------chHHHHHHHHHHHHhcCCCCCcceeee
Q 020393           55 CPVGGGCINLASRYGTDAG-SFFVKTNRSIG------P---------------SMFEGEALGLGAMYETRTIRAPRPFKV  112 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~~------~---------------~~~~~E~~~l~~L~~~~~~~vP~~~~~  112 (326)
                      +.+|.|..+.||+.+..+| .+++|+.+...      .               .....|...+..+   .++++|.++..
T Consensus         6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~~~~v~~~~~~   82 (191)
T d1zara2           6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL---QGLAVPKVYAW   82 (191)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT---TTSSSCCEEEE
T ss_pred             CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc---cCCCcceEEEe
Confidence            4578899999999987655 79999864210      0               0112344444444   35788988866


Q ss_pred             cccCCCceEEEEeeecCC
Q 020393          113 GALPTGGSYIIMEFIEFG  130 (326)
Q Consensus       113 ~~~~~~~~~~v~e~l~G~  130 (326)
                      .     ..+++||+++|.
T Consensus        83 ~-----~~~lvme~~~~~   95 (191)
T d1zara2          83 E-----GNAVLMELIDAK   95 (191)
T ss_dssp             E-----TTEEEEECCCCE
T ss_pred             c-----CCEEEEEeeccc
Confidence            4     348999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.1e-07  Score=82.93  Aligned_cols=94  Identities=15%  Similarity=0.121  Sum_probs=62.6

Q ss_pred             chhHHHHHHhc-CCC---cceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCC---CCcchHHHHHHHHHHHHhcCCCC
Q 020393           35 DDPIREWILSE-GKA---THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRS---IGPSMFEGEALGLGAMYETRTIR  105 (326)
Q Consensus        35 ~~~i~~~l~~~-~~~---~~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~---~~~~~~~~E~~~l~~L~~~~~~~  105 (326)
                      ++++.+-+.+. ..+   .+=.-++.+|.|..+.||+.... +| .|.+|....   .....+..|.++++.+..   -.
T Consensus         2 d~~~~~~l~~~~~~~dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H---pn   78 (293)
T d1yhwa1           2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN---PN   78 (293)
T ss_dssp             HHHHHHHHHHHSBSSCTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC---TT
T ss_pred             hHHHHHHHhccCCCCCcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCC---CC
Confidence            45555555553 111   13344678999999999999753 34 788897642   234557789988887753   23


Q ss_pred             CcceeeecccCCCceEEEEeeecCCCC
Q 020393          106 APRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       106 vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      +.+++..... ++..|+||||++|+++
T Consensus        79 Iv~~~~~~~~-~~~~~ivmEy~~gg~L  104 (293)
T d1yhwa1          79 IVNYLDSYLV-GDELWVVMEYLAGGSL  104 (293)
T ss_dssp             BCCEEEEEEE-TTEEEEEEECCTTCBH
T ss_pred             EeeEeEEEEE-CCEEEEEEEecCCCcH
Confidence            5666655433 5688999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.51  E-value=4.5e-07  Score=78.26  Aligned_cols=76  Identities=11%  Similarity=-0.004  Sum_probs=54.0

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC---C---------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      .+.+|.|..+.||++... ++ .|.+|+-+..   .         ...+..|..+++.|..+  -.+.+++..... ++.
T Consensus         8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--pnIv~~~~~~~~-~~~   84 (277)
T d1phka_           8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH--PNIIQLKDTYET-NTF   84 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSE
T ss_pred             ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEEeeccc-Ccc
Confidence            567889999999999863 44 6778875421   1         12356788888888754  246677766543 568


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .|+||||++|+++
T Consensus        85 ~~ivmE~~~~g~L   97 (277)
T d1phka_          85 FFLVFDLMKKGEL   97 (277)
T ss_dssp             EEEEEECCTTCBH
T ss_pred             eEEEEEcCCCchH
Confidence            8999999998765

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.50  E-value=3.3e-07  Score=80.86  Aligned_cols=104  Identities=11%  Similarity=0.039  Sum_probs=69.0

Q ss_pred             cccccCCCchhHHHHHH-hcC---CC--cceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHH
Q 020393           27 RRTFATLSDDPIREWIL-SEG---KA--THITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAM   98 (326)
Q Consensus        27 ~~~~~~~~~~~i~~~l~-~~~---~~--~~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L   98 (326)
                      -.||++++.+.=.++.. +..   .+  .+-.-++.+|.|..+.||+.+.. ++ .|.+|+-.......+..|.++|+.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l   86 (328)
T d3bqca1           7 ARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL   86 (328)
T ss_dssp             CSSSTTTTTTSCHHHHCGGGCCCCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred             ceeeccccccCCCccchhhhcccCCCCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhc
Confidence            34777777765454432 221   11  12234677899999999999863 34 6788987655556678899999999


Q ss_pred             HhcCCCCCcceeeecccC-CCceEEEEeeecCCCC
Q 020393           99 YETRTIRAPRPFKVGALP-TGGSYIIMEFIEFGSS  132 (326)
Q Consensus        99 ~~~~~~~vP~~~~~~~~~-~~~~~~v~e~l~G~~~  132 (326)
                      ..+  -.+.+++...... ....+++||+++|..+
T Consensus        87 ~~h--pnIv~~~~~~~~~~~~~~~~v~e~~~~~~L  119 (328)
T d3bqca1          87 RGG--PNIITLADIVKDPVSRTPALVFEHVNNTDF  119 (328)
T ss_dssp             TTS--TTBCCEEEEEECTTTCSEEEEEECCCSCBG
T ss_pred             cCC--CCCcEEEEEEEecCCCceeEEEeecCCCcH
Confidence            754  2466666553322 4578999999998754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=3e-07  Score=79.19  Aligned_cols=75  Identities=12%  Similarity=0.046  Sum_probs=51.8

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++.+|.|..+.||+.... ++ .|.+|+...    .....+..|.++++.|..   -.+.+++..... ++..|+||||+
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~H---pnIv~~~~~~~~-~~~~~ivmEy~   85 (271)
T d1nvra_          10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH---ENVVKFYGHRRE-GNIQYLFLEYC   85 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCC---TTBCCEEEEEEE-TTEEEEEEECC
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCC---CCEeeEeeeecc-CceeEEEEecc
Confidence            567899999999999863 34 688898643    123457789888877742   235566655443 56889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus        86 ~gg~L   90 (271)
T d1nvra_          86 SGGEL   90 (271)
T ss_dssp             TTEEG
T ss_pred             CCCcH
Confidence            98765

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.5e-07  Score=78.33  Aligned_cols=75  Identities=13%  Similarity=0.044  Sum_probs=52.6

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.+|.|..+.||++... ++ .|.+|+...      .....+..|..+++.+..   -.+.+++..... ++..|+|||
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~ivmE   86 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH---PNILRLYGYFHD-ATRVYLILE   86 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCC---CCCCeEEEEEEE-CCEEEEEEe
Confidence            467899999999999874 34 688897532      223456778888777642   235666665543 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        87 y~~~g~L   93 (263)
T d2j4za1          87 YAPLGTV   93 (263)
T ss_dssp             CCTTCBH
T ss_pred             ecCCCcH
Confidence            9998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.9e-07  Score=76.80  Aligned_cols=78  Identities=23%  Similarity=0.217  Sum_probs=56.6

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-.+.+|.|..+.||+....++ .+.+|.-...  ....+..|+.+++.+..   -.+.+++....  ++..++||||
T Consensus        14 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~--~~~~~iv~Ey   88 (272)
T d1qpca_          14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH---QRLVRLYAVVT--QEPIYIITEY   88 (272)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSSCEEEEEC
T ss_pred             HeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCC---CCEeEEEeeec--cCCeEEEEEe
Confidence            344567799999999999988665 5778987542  34557889998888843   23556666543  4677999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|+++
T Consensus        89 ~~~g~L   94 (272)
T d1qpca_          89 MENGSL   94 (272)
T ss_dssp             CTTCBH
T ss_pred             CCCCcH
Confidence            998754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=4.9e-07  Score=78.45  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=53.8

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC---CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.+|.|..+.||+.... ++ .+.+|+....   ....+..|.++++.|..   -.+.+++..... ++..++||||++
T Consensus        17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~~lvmEy~~   92 (288)
T d2jfla1          17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH---PNIVKLLDAFYY-ENNLWILIEFCA   92 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCC---TTBCCEEEEEEE-TTEEEEEEECCT
T ss_pred             eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC---CCCCeEEEEEee-CCeEEEEEecCC
Confidence            567899999999999863 34 6788886432   23457789998887753   235566655443 578899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus        93 ~g~L   96 (288)
T d2jfla1          93 GGAV   96 (288)
T ss_dssp             TEEH
T ss_pred             CCcH
Confidence            8754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=9.8e-07  Score=76.45  Aligned_cols=79  Identities=23%  Similarity=0.164  Sum_probs=55.3

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      +..-.+.+|.|..+.||+.... ++ .+.+|.-...  ....+.+|+++++.|..   -.+-+++..... ++..+++||
T Consensus        18 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~iv~E   93 (287)
T d1opja_          18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---PNLVQLLGVCTR-EPPFYIITE   93 (287)
T ss_dssp             GEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSCEEEEE
T ss_pred             HeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCC---CCEecCCccEee-CCeeEEEee
Confidence            3444567899999999998764 34 5778986543  23557789988888753   235556655433 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        94 ~~~~g~l  100 (287)
T d1opja_          94 FMTYGNL  100 (287)
T ss_dssp             CCTTCBH
T ss_pred             cccCcch
Confidence            9998754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2e-06  Score=75.06  Aligned_cols=140  Identities=19%  Similarity=0.124  Sum_probs=78.5

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCc---ceeeecccCC---CceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAP---RPFKVGALPT---GGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP---~~~~~~~~~~---~~~~~v~e~l  127 (326)
                      -+.+|.|.+..||+.+..+..+.+|............|.+++...    .+.-|   +++.......   ...|+||||+
T Consensus         8 ~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~----~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_           8 QESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTST----TCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHh----hCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            456899999999999877778999987643322233444333211    12233   3444432211   2468999999


Q ss_pred             cCCCCCCcHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCCCCCccHHHHHHHhhhHHHHHHHHhhcCChHHHHHHH
Q 020393          128 EFGSSRGNQSVFGKKLAEMHKAGKSSKGFGFDVDNTIGSTPQINKWTSNWIEFYAEHRLGYQLKLALDQYGDSTIYQRGH  207 (326)
Q Consensus       128 ~G~~~~~~~~~lg~~La~lH~~~~~~~~fg~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  207 (326)
                      +++++..          -|++...                        +|...     +.-..             +.+.
T Consensus        84 ~~g~L~~----------~l~~~~l------------------------~~~~~-----~~~~~-------------~ia~  111 (303)
T d1vjya_          84 EHGSLFD----------YLNRYTV------------------------TVEGM-----IKLAL-------------STAS  111 (303)
T ss_dssp             TTCBHHH----------HHHHCCB------------------------CHHHH-----HHHHH-------------HHHH
T ss_pred             cCCCHHH----------HHhcCCC------------------------CHHHH-----HHHHH-------------HHHH
Confidence            9876522          2233211                        12111     10000             1111


Q ss_pred             HHHHHhcccccCCCCCcceeecCCCCCCeeecCCCCeEEEccc
Q 020393          208 RLMKNLAPLFEGVNVEPCLLHGDLWSGNISSDKNGEPVILDPA  250 (326)
Q Consensus       208 ~l~~~~~~~l~~~~~~~~LiHgDl~~~NiL~~~~~~~~iID~~  250 (326)
                      .+...+...+.. .....+||+|++|.|||+++++...|.||.
T Consensus       112 gl~~lH~~~~~~-~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG  153 (303)
T d1vjya_         112 GLAHLHMEIVGT-QGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             HHHHHHCCBCST-TCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred             HHHHHHHhhhhh-ccCCCeeccccCccceEEcCCCCeEEEecC
Confidence            122212222221 246799999999999999988888899974

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.33  E-value=8.8e-07  Score=77.85  Aligned_cols=74  Identities=18%  Similarity=0.177  Sum_probs=51.8

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.+|.|..+.||++... +| .|.+|+...      .....+..|..+++.+..   -.+.+++..... ++..|+|||
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE   84 (316)
T d1fota_           9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH---PFIIRMWGTFQD-AQQIFMIMD   84 (316)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccC---cChhheeeeEee-CCeeeeEee
Confidence            567889999999999863 34 688898642      223456678887776642   235566665443 578899999


Q ss_pred             eecCCC
Q 020393          126 FIEFGS  131 (326)
Q Consensus       126 ~l~G~~  131 (326)
                      |++|+.
T Consensus        85 ~~~gg~   90 (316)
T d1fota_          85 YIEGGE   90 (316)
T ss_dssp             CCCSCB
T ss_pred             ecCCcc
Confidence            999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=8.4e-07  Score=76.94  Aligned_cols=75  Identities=8%  Similarity=-0.054  Sum_probs=52.5

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.+|.|..+.||+.... ++ .|.+|+...      .....+..|.++++.|..   -.+.+++..... ++..|+|||
T Consensus        13 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~~~~~~-~~~~~ivmE   88 (288)
T d1uu3a_          13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH---PFFVKLYFTFQD-DEKLYFGLS   88 (288)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS---TTBCCEEEEEEC-SSEEEEEEC
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCC---CCeeEEEEEEEE-CCEEEEEEE
Confidence            456888999999999763 34 688997532      223457789988887743   235566655433 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        89 y~~gg~L   95 (288)
T d1uu3a_          89 YAKNGEL   95 (288)
T ss_dssp             CCTTEEH
T ss_pred             ccCCCCH
Confidence            9998754

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.4e-06  Score=76.66  Aligned_cols=75  Identities=15%  Similarity=0.076  Sum_probs=54.3

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC--cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG--PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      .+.+|.|..+.||+.... ++ .|.+|......  ...+..|+++|+.+..   -.+.+++..... ++..|+||||++|
T Consensus        10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~lvmE~~~g   85 (321)
T d1tkia_          10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH---RNILHLHESFES-MEELVMIFEFISG   85 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC---TTBCCEEEEEEE-TTEEEEEECCCCC
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCC---CCCCeEEEEEEE-CCEEEEEEecCCC
Confidence            457899999999998764 34 69999876532  3446788888877753   246666665443 5789999999998


Q ss_pred             CCC
Q 020393          130 GSS  132 (326)
Q Consensus       130 ~~~  132 (326)
                      +++
T Consensus        86 g~L   88 (321)
T d1tkia_          86 LDI   88 (321)
T ss_dssp             CBH
T ss_pred             CcH
Confidence            754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.1e-06  Score=75.40  Aligned_cols=76  Identities=18%  Similarity=0.161  Sum_probs=47.2

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-CCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-TGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-~~~~~~v~e  125 (326)
                      ++.+|.|..+.||++... +| .|.+|......     ...+..|.++++.+..   -.+.+++...... ++..|+|||
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~~~~~~~~ivmE   85 (269)
T d2java1           9 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH---PNIVRYYDRIIDRTNTTLYIVME   85 (269)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCC---TTBCCEEEEEEC----CEEEEEE
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCC---CCEeeEEEEEEeCCCCEEEEEEe
Confidence            467889999999999763 44 68889865422     2335567666555532   1344455433221 356799999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        86 y~~~g~L   92 (269)
T d2java1          86 YCEGGDL   92 (269)
T ss_dssp             CCTTEEH
T ss_pred             cCCCCcH
Confidence            9998754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.3e-06  Score=75.36  Aligned_cols=80  Identities=14%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             ceeeEeEeCCccccceEEEEeCC-c------cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTDA-G------SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~-~------~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..=.+.+|.|....||+.+... +      .+.+|....    .....+..|..++..+..+  -.+.+++..... .+
T Consensus        38 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~H--pnIv~l~~~~~~-~~  114 (325)
T d1rjba_          38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH--ENIVNLLGACTL-SG  114 (325)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SS
T ss_pred             HeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCC--CcEeEEEEEEee-CC
Confidence            34445678999999999987532 1      366676543    1244567898888888543  235666665443 56


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..++||||++|+++
T Consensus       115 ~~~lv~Ey~~~g~L  128 (325)
T d1rjba_         115 PIYLIFEYCCYGDL  128 (325)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             eEEEEEEcCCCCcH
Confidence            88999999999765

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.28  E-value=9e-07  Score=79.02  Aligned_cols=75  Identities=15%  Similarity=0.119  Sum_probs=51.2

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.+|.|..+.||+.... ++ .|.+|+.....   ...+..|+.+++.|..   -.+.+++..... ++..|+||||++
T Consensus        34 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE~~~  109 (352)
T d1koba_          34 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH---PKLINLHDAFED-KYEMVLILEFLS  109 (352)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS---TTBCCEEEEEEC-SSEEEEEEECCC
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEEcCC
Confidence            467899999999999753 34 68889765422   3345678877766632   235555554433 568899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus       110 gg~L  113 (352)
T d1koba_         110 GGEL  113 (352)
T ss_dssp             CCBH
T ss_pred             CChH
Confidence            9754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.2e-06  Score=72.08  Aligned_cols=79  Identities=19%  Similarity=0.133  Sum_probs=57.0

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..-++.+|.|..+.||+....++ .+.+|.-...  ....+..|+++++.+..   -.+-+++..... ++..++||||
T Consensus         6 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~~-~~~~~lv~E~   81 (263)
T d1sm2a_           6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---PKLVQLYGVCLE-QAPICLVFEF   81 (263)
T ss_dssp             CEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC---TTBCCEEEEECS-SSSCEEEEEC
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCC---CCcccccceecc-CCceEEEEEe
Confidence            345567799999999999987655 6888986542  23557788888887753   235566665433 5688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|+++
T Consensus        82 ~~~g~L   87 (263)
T d1sm2a_          82 MEHGCL   87 (263)
T ss_dssp             CTTCBH
T ss_pred             cCCCcH
Confidence            998755

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.26  E-value=2.2e-06  Score=76.39  Aligned_cols=75  Identities=15%  Similarity=0.110  Sum_probs=54.2

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCCC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      ++.+|.|..+.||++... +| .|++|......   ...+..|..+++.|..   -.+.+++..... ++..|+||||++
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~ivmE~~~  106 (350)
T d1koaa2          31 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH---PTLVNLHDAFED-DNEMVMIYEFMS  106 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCC---TTBCCEEEEEEE-TTEEEEEECCCC
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEEcCC
Confidence            466899999999999863 34 68889875432   3446789888888853   236666665443 578999999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus       107 gg~L  110 (350)
T d1koaa2         107 GGEL  110 (350)
T ss_dssp             SCBH
T ss_pred             CCCH
Confidence            9755

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.1e-06  Score=75.71  Aligned_cols=73  Identities=15%  Similarity=0.038  Sum_probs=50.2

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeec
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIE  128 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~  128 (326)
                      .+.+|.|....||+.+.. +.+.+|.....     ....+..|+.+++.+..   -.+-+++....  ++..+++|||++
T Consensus        13 ~~~lG~G~fg~Vy~~~~~-~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~~~~~--~~~~~lv~Ey~~   86 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH-GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH---VNILLFMGYST--APQLAIVTQWCE   86 (276)
T ss_dssp             CSEEEECSSCEEEEEESS-SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEC--SSSCEEEEECCC
T ss_pred             EEEEeeCCCcEEEEEEEC-CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC---CCEeeeeEEEe--ccEEEEEEecCC
Confidence            457899999999998754 46888886531     12446678888777642   12445555543  467899999999


Q ss_pred             CCCC
Q 020393          129 FGSS  132 (326)
Q Consensus       129 G~~~  132 (326)
                      |+++
T Consensus        87 ~g~L   90 (276)
T d1uwha_          87 GSSL   90 (276)
T ss_dssp             EEEH
T ss_pred             CCCH
Confidence            8754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.22  E-value=2.9e-06  Score=75.97  Aligned_cols=78  Identities=12%  Similarity=0.014  Sum_probs=50.0

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.+|.|..+.||++... +| .|.+|+...      .....+..|...++.++...--.+.+++..... ++..|+|||
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~-~~~~~ivmE   87 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILD   87 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE-CCEEEEEEE
Confidence            456899999999999864 34 688897532      122334556666666654211224444444332 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        88 ~~~gg~L   94 (364)
T d1omwa3          88 LMNGGDL   94 (364)
T ss_dssp             CCCSCBH
T ss_pred             ecCCCcH
Confidence            9998765

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=7.2e-07  Score=78.62  Aligned_cols=77  Identities=18%  Similarity=0.054  Sum_probs=51.6

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.+|.|..+.||+.... ++ .+.+|..... .   ...+..|..+|+.|..   -.+.+++..... ++..|+|||
T Consensus         9 ~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~-~~~~~iVmE   84 (322)
T d1s9ja_           9 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS---PYIVGFYGAFYS-DGEISICME   84 (322)
T ss_dssp             EEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEE
Confidence            34577999999999999863 44 5778876432 1   2345678777766642   235555554433 567899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        85 y~~gg~L   91 (322)
T d1s9ja_          85 HMDGGSL   91 (322)
T ss_dssp             CCTTEEH
T ss_pred             cCCCCcH
Confidence            9998754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.2e-06  Score=75.97  Aligned_cols=75  Identities=13%  Similarity=-0.006  Sum_probs=51.6

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      ++.+|.|..+.||++... ++ .|.+|+-..      .....+..|..+|+.+..   -.+.+++..... .+..|+|||
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h---p~Iv~l~~~~~~-~~~~~iv~e   85 (337)
T d1o6la_          10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH---PFLTALKYAFQT-HDRLCFVME   85 (337)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC---TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCC---CCEEEEEeeecc-cccccccee
Confidence            566899999999999863 33 788898642      223445678877766642   235566655443 468899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      +++|+.+
T Consensus        86 y~~gg~L   92 (337)
T d1o6la_          86 YANGGEL   92 (337)
T ss_dssp             CCTTCBH
T ss_pred             ccCCCch
Confidence            9999754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=4.1e-06  Score=72.32  Aligned_cols=78  Identities=19%  Similarity=0.238  Sum_probs=57.1

Q ss_pred             ceeeEeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           50 HITKICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      +..=.+.+|.|....||+....++ .+.+|.-...  ....+..|+.+++.+...   .+.+++....  ++..++||||
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~g~~~--~~~~~lv~Ey   92 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE---KLVQLYAVVS--EEPIYIVTEY   92 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCT---TBCCEEEEEC--SSSCEEEECC
T ss_pred             HEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccC---CEeEEEEEEe--cCCeEEEEEe
Confidence            455567799999999999987665 6778986543  235577899888887542   4666776543  4678999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|+++
T Consensus        93 ~~~g~l   98 (285)
T d1fmka3          93 MSKGSL   98 (285)
T ss_dssp             CTTCBH
T ss_pred             cCCCch
Confidence            998754

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.15  E-value=7.2e-06  Score=70.95  Aligned_cols=73  Identities=8%  Similarity=0.055  Sum_probs=53.4

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecC
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEF  129 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G  129 (326)
                      .+.+|.|..+.||+++.. ++ .+.+|+.+. .....++.|.+.++.|...  -.+|.++..+.. .+..+++||++.|
T Consensus        10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~-~~~~~~vme~~~~   85 (293)
T d1csna_          10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQE-GLHNVLVIDLLGP   85 (293)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEE-TTEEEEEEECCCC
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCC--CCCCEEEEEeec-CCccEEEEEecCC
Confidence            457899999999999864 34 688898643 3345578899988888753  346777776654 5688999999854

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.12  E-value=2.7e-06  Score=73.07  Aligned_cols=76  Identities=18%  Similarity=0.082  Sum_probs=48.1

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC---CCceEE
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP---TGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~---~~~~~~  122 (326)
                      .+.++.|..+.||+.... ++ .|.+|+-...   .   ...+..|.++++.+..   -.+.+++......   .+..|+
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~h---pniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_          12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH---PAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEEEECSSSEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCC---CCCCcccceeeeccCCCceEEE
Confidence            457899999999999853 34 7889986532   1   1235567776655432   2344554443221   235789


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|..+
T Consensus        89 vmE~~~g~~L   98 (277)
T d1o6ya_          89 VMEYVDGVTL   98 (277)
T ss_dssp             EEECCCEEEH
T ss_pred             EEECCCCCEe
Confidence            9999998754

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.10  E-value=4.9e-06  Score=72.61  Aligned_cols=75  Identities=15%  Similarity=0.057  Sum_probs=50.3

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      .+.+|.|..+.||++... ++ .|.+|.....    ....+..|..+++.|..   -.+.+++..... ++..|+||||+
T Consensus        14 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~-~~~~~lvmE~~   89 (307)
T d1a06a_          14 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH---PNIVALDDIYES-GGHLYLIMQLV   89 (307)
T ss_dssp             EEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCC---TTBCCEEEEEEC-SSEEEEEECCC
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEEEEecc
Confidence            456899999999999864 34 6788976431    23445678888877742   236666665443 57889999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus        90 ~gg~L   94 (307)
T d1a06a_          90 SGGEL   94 (307)
T ss_dssp             CSCBH
T ss_pred             CCCcH
Confidence            98765

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.4e-05  Score=70.72  Aligned_cols=80  Identities=8%  Similarity=-0.071  Sum_probs=47.3

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeeccc---CCCce
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~~~~~  120 (326)
                      +=.-++.+|.|..+.||+.... ++ .+.+|.-....    ...+..|.++|+.|...   .+.+++.....   .....
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp---~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE---NIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCT---TBCCCCEEECCSSTTTCCC
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCC---CCCcEEEEEeeccccccce
Confidence            4456788999999999999753 44 57789765422    22456799999888542   23344433221   12345


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++++++.|.++
T Consensus        86 ~~l~~~~~~g~L   97 (345)
T d1pmea_          86 VYLVTHLMGADL   97 (345)
T ss_dssp             EEEEEECCCEEH
T ss_pred             EEEEEeecCCch
Confidence            667777777543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=6.6e-06  Score=71.31  Aligned_cols=74  Identities=11%  Similarity=-0.003  Sum_probs=50.4

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .++.+|.|..+.||+.... ++ .|.+|.-...        ....+..|..+++.+..   -.+.+++..... ++..|+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h---pnIv~~~~~~~~-~~~~~i   77 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH---PNIIGLLDAFGH-KSNISL   77 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC---TTBCCEEEEECC-TTCCEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCC---CCEeEEEeeecc-CCceee
Confidence            3677899999999999863 34 6888976421        12346688888887753   235556655433 568899


Q ss_pred             EEeeecCC
Q 020393          123 IMEFIEFG  130 (326)
Q Consensus       123 v~e~l~G~  130 (326)
                      |||+.+|.
T Consensus        78 vmE~~~~~   85 (299)
T d1ua2a_          78 VFDFMETD   85 (299)
T ss_dssp             EEECCSEE
T ss_pred             hhhhhcch
Confidence            99999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=4e-06  Score=71.47  Aligned_cols=76  Identities=20%  Similarity=0.180  Sum_probs=52.7

Q ss_pred             EeEeCCccccceEEEEeCCccEEEEecCCC-CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCCCC
Q 020393           54 ICPVGGGCINLASRYGTDAGSFFVKTNRSI-GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFGSS  132 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~~~vlK~~~~~-~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~~~  132 (326)
                      ++.++.|..+.||+....+..+.+|.-... ....+.+|+++++.+..   -.+-+++.......+..++||||++|+++
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~~~~~~~~lv~ey~~~g~L   88 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRH---SNLVQLLGVIVEEKGGLYIVTEYMAKGSL   88 (262)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCC---TTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             eEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence            456889999999999887778999988653 34557788887776632   23555665432213567999999998765

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=9.8e-06  Score=70.34  Aligned_cols=79  Identities=23%  Similarity=0.115  Sum_probs=49.9

Q ss_pred             ceeeEeEeCCccccceEEEEeC-Cc----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           50 HITKICPVGGGCINLASRYGTD-AG----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-~~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      ...-.+.+|.|....||+.... ++    .+.+|..... .   ...+..|+.+++.|..   -.+.+++..... .+..
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~~-~~~~  102 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH---PNVIHLEGVVTK-STPV  102 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEECS-SSSC
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC---CCCccEEEEEee-CCEE
Confidence            3444567899999999998753 22    2445654432 1   2346678877776642   234556665433 5688


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++|||++|+.+
T Consensus       103 ~iv~Ey~~~g~L  114 (299)
T d1jpaa_         103 MIITEFMENGSL  114 (299)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEEecCCCcc
Confidence            999999998754

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=5.1e-06  Score=73.89  Aligned_cols=77  Identities=16%  Similarity=0.056  Sum_probs=50.9

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      .-++.+|.|..+.||++... +| .|.+|+...      .....+..|..+++.+..   -.+.+++..... .+..+++
T Consensus        44 ~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~~v  119 (350)
T d1rdqe_          44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF---PFLVKLEFSFKD-NSNLYMV  119 (350)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEE
T ss_pred             EEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCC---CcEeeccccccc-ccccccc
Confidence            44677899999999999763 34 688897532      122345678777766532   234455544332 4678999


Q ss_pred             EeeecCCCC
Q 020393          124 MEFIEFGSS  132 (326)
Q Consensus       124 ~e~l~G~~~  132 (326)
                      |+++.|+.+
T Consensus       120 ~e~~~~g~l  128 (350)
T d1rdqe_         120 MEYVAGGEM  128 (350)
T ss_dssp             EECCTTCBH
T ss_pred             cccccccch
Confidence            999998754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=4.2e-06  Score=71.69  Aligned_cols=75  Identities=12%  Similarity=0.041  Sum_probs=47.9

Q ss_pred             eEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeeccc--C-CCceEEEE
Q 020393           55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGAL--P-TGGSYIIM  124 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~--~-~~~~~~v~  124 (326)
                      +.+|.|..+.||+.... ++ .+.+|.....     ....+..|+++++.|..   -.+.+++.....  . .+..|+||
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH---PNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC---CCeeeEEEEEeeccccCCEEEEEE
Confidence            35899999999999764 34 5667764321     12346678877766642   235556554321  1 23568999


Q ss_pred             eeecCCCC
Q 020393          125 EFIEFGSS  132 (326)
Q Consensus       125 e~l~G~~~  132 (326)
                      ||++|.++
T Consensus        92 E~~~~g~L   99 (270)
T d1t4ha_          92 ELMTSGTL   99 (270)
T ss_dssp             ECCCSCBH
T ss_pred             eCCCCCcH
Confidence            99999765

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.04  E-value=4.2e-06  Score=73.13  Aligned_cols=77  Identities=10%  Similarity=-0.010  Sum_probs=50.7

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC------cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG------PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~------~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      -..++.+|.|..+.||+.... ++ .+.+|.-....      ...+..|..+++.|..   -.+-+++..... ++..|+
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~~~~~~~~-~~~~~i   92 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH---PNTIQYRGCYLR-EHTAWL   92 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEE
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCC---CCEeeEEEEEEE-CCEEEE
Confidence            456788999999999999753 44 57788754321      1235567777766542   124445544332 568899


Q ss_pred             EEeeecCCC
Q 020393          123 IMEFIEFGS  131 (326)
Q Consensus       123 v~e~l~G~~  131 (326)
                      ||||++|+.
T Consensus        93 v~E~~~~g~  101 (309)
T d1u5ra_          93 VMEYCLGSA  101 (309)
T ss_dssp             EEECCSEEH
T ss_pred             EEEecCCCc
Confidence            999998763

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=6.2e-06  Score=70.10  Aligned_cols=75  Identities=15%  Similarity=0.120  Sum_probs=53.1

Q ss_pred             EeEeCCccccceEEEEeCCc-cEEEEecCCC--CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTDAG-SFFVKTNRSI--GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~--~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      ++.+|.|..+.||+....++ .+.+|.-+..  ....+.+|+..++.+..   -.+-++++.... ++..++||||++|+
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~H---pnIv~~~g~~~~-~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH---EKLVQLYGVCTK-QRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCC---TTBCCEEEEECC-SSSEEEEEECCTTE
T ss_pred             eEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCC---CceeeEEEEEee-CCceEEEEEccCCC
Confidence            45688999999999998766 5778876542  34557788887776642   235556665433 56889999999976


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      .+
T Consensus        85 ~l   86 (258)
T d1k2pa_          85 CL   86 (258)
T ss_dssp             EH
T ss_pred             cH
Confidence            54

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=9.8e-06  Score=70.19  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=51.4

Q ss_pred             eEeEeCCccccceEEEEe-CCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGT-DAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      -++.+|.|..+.||++.. .++ .|.+|+....     ....+..|.++++.+..   -.+.+++..-.. .+..|++||
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H---p~Iv~~~~~~~~-~~~~~iv~e   81 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH---PNIVKLLDVIHT-ENKLYLVFE   81 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCC---TTBCCEEEEEEE-TTEEEEEEE
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC---CcEEEecccccc-ccceeEEEe
Confidence            467899999999999986 344 6778976431     23456678888876642   246666655443 568899999


Q ss_pred             eecCC
Q 020393          126 FIEFG  130 (326)
Q Consensus       126 ~l~G~  130 (326)
                      ++.|.
T Consensus        82 ~~~~~   86 (298)
T d1gz8a_          82 FLHQD   86 (298)
T ss_dssp             CCSEE
T ss_pred             ecCCc
Confidence            99774

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.3e-05  Score=69.21  Aligned_cols=75  Identities=15%  Similarity=0.114  Sum_probs=53.5

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.+|.|..+.||++... +| .|.+|+....         ....+..|+++++.|..   -.+.+++..... ++..|+
T Consensus        15 ~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~~~~~~-~~~~~i   90 (293)
T d1jksa_          15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH---PNVITLHEVYEN-KTDVIL   90 (293)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC---TTBCCEEEEEEC-SSEEEE
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCC---CCCCcEEEEEEE-CCEEEE
Confidence            466899999999999863 34 6888875321         12446789999888853   246667765443 568899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      ||||++|+++
T Consensus        91 v~E~~~gg~L  100 (293)
T d1jksa_          91 ILELVAGGEL  100 (293)
T ss_dssp             EEECCCSCBH
T ss_pred             EEEcCCCccc
Confidence            9999998754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.01  E-value=1e-05  Score=69.55  Aligned_cols=75  Identities=16%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             eeEeEeCCccccceEEEEeCCc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           52 TKICPVGGGCINLASRYGTDAG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .-++.+|.|..+.||+.+..++ .|.+|.....     ....+..|..+++.+..   -.+.+++..... ++..+++|+
T Consensus         5 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~~~~~~~~-~~~~~i~~e   80 (286)
T d1ob3a_           5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH---SNIVKLYDVIHT-KKRLVLVFE   80 (286)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC---TTBCCEEEEEEC-SSCEEEEEE
T ss_pred             eeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC---CcEEeeeeeccc-CCceeEEEE
Confidence            3467799999999999987655 6888986532     13456678888777642   235555544332 568899999


Q ss_pred             eecCC
Q 020393          126 FIEFG  130 (326)
Q Consensus       126 ~l~G~  130 (326)
                      +..|.
T Consensus        81 ~~~~~   85 (286)
T d1ob3a_          81 HLDQD   85 (286)
T ss_dssp             CCSEE
T ss_pred             eehhh
Confidence            88774

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.4e-05  Score=69.07  Aligned_cols=77  Identities=14%  Similarity=-0.006  Sum_probs=48.8

Q ss_pred             eEeEeCCccccceEEEEe-CCc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeeccc----CCCceE
Q 020393           53 KICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL----PTGGSY  121 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~----~~~~~~  121 (326)
                      -++.+|.|..+.||+... .++ .|.+|+-....     ...+..|+.+|+.|...   .+.+++.....    .++..+
T Consensus        22 i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~---~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE---NVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCT---TBCCCSEEECSCSSTTTCCCC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCC---CeeeEEEEEeeccccccCceE
Confidence            357799999999999975 344 67889875421     12355788888888532   23344433211    134567


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++|+++.|+++
T Consensus        99 ~i~~~~~gg~L  109 (348)
T d2gfsa1          99 YLVTHLMGADL  109 (348)
T ss_dssp             EEEEECCSEEH
T ss_pred             EEEEeecCCch
Confidence            77888887644

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.4e-05  Score=68.43  Aligned_cols=76  Identities=14%  Similarity=0.055  Sum_probs=48.6

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.+|.|..+.||++... ++ .|.+|+-..      .....+..|..++...-.+  -.+.+++..... .+..|+|||
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~h--p~Iv~~~~~~~~-~~~~yivmE   83 (320)
T d1xjda_           7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH--PFLTHMFCTFQT-KENLFFVME   83 (320)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC--TTBCCEEEEEEC-SSEEEEEEE
T ss_pred             eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCC--CcEEEEEEEEcc-CCceeEEEe
Confidence            467888999999999874 33 688898642      1222344555554433222  235566655433 568899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        84 y~~~g~L   90 (320)
T d1xjda_          84 YLNGGDL   90 (320)
T ss_dssp             CCTTCBH
T ss_pred             ecCCCcH
Confidence            9998754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.6e-05  Score=68.16  Aligned_cols=72  Identities=15%  Similarity=0.115  Sum_probs=48.2

Q ss_pred             EeCCccccceEEEEeCC---c-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGTDA---G-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~---~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+|.|....||+....+   + .+.+|.-...  +   ...+..|+.+++.|..   -.+.+++....  .+..++||||
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~H---pnIv~~~g~~~--~~~~~lvmE~   88 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN---PYIVRMIGICE--AESWMLVMEM   88 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC---TTBCCEEEEEE--SSSEEEEEEC
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCC---CCCceEEEEec--cCCEEEEEEc
Confidence            59999999999986432   2 4778876432  1   2346788888877742   23556665543  3567999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|+++
T Consensus        89 ~~~g~L   94 (277)
T d1xbba_          89 AELGPL   94 (277)
T ss_dssp             CTTEEH
T ss_pred             CCCCcH
Confidence            998754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.9e-05  Score=69.27  Aligned_cols=76  Identities=12%  Similarity=0.034  Sum_probs=53.5

Q ss_pred             EeEeCCccccceEEEEeC----Cc-cEEEEecCC-------CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           54 ICPVGGGCINLASRYGTD----AG-SFFVKTNRS-------IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~----~~-~~vlK~~~~-------~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ++.+|.|..+.||++...    +| .|.+|+...       .....+..|.++++.+..+ + .+.+++..-.. ....+
T Consensus        29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~-p-nIv~~~~~~~~-~~~~~  105 (322)
T d1vzoa_          29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS-P-FLVTLHYAFQT-ETKLH  105 (322)
T ss_dssp             EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC-T-TBCCEEEEEEE-TTEEE
T ss_pred             EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCC-C-eEEEeeeeecc-CCcee
Confidence            578999999999998752    23 588897532       1234466899999999764 2 35555554333 46889


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      ++||+..|.++
T Consensus       106 ~v~e~~~~~~L  116 (322)
T d1vzoa_         106 LILDYINGGEL  116 (322)
T ss_dssp             EEECCCCSCBH
T ss_pred             eeeecccccHH
Confidence            99999998765

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=1.9e-05  Score=67.93  Aligned_cols=72  Identities=14%  Similarity=0.033  Sum_probs=49.2

Q ss_pred             EeCCccccceEEEEeC---Cc-cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeee
Q 020393           56 PVGGGCINLASRYGTD---AG-SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFI  127 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~---~~-~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l  127 (326)
                      ++|.|..+.||+....   ++ .+.+|.-... .   ...+..|+++++.|..   -.+.+++....  .+..|+||||+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~g~~~--~~~~~lvmE~~   90 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN---PYIVRLIGVCQ--AEALMLVMEMA   90 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSEEEEEECC
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCC---CCEeeEeeeec--cCeEEEEEEeC
Confidence            4899999999997542   23 4667875432 1   2446789888888742   24566666544  35789999999


Q ss_pred             cCCCC
Q 020393          128 EFGSS  132 (326)
Q Consensus       128 ~G~~~  132 (326)
                      +|+++
T Consensus        91 ~~g~L   95 (285)
T d1u59a_          91 GGGPL   95 (285)
T ss_dssp             TTEEH
T ss_pred             CCCcH
Confidence            98753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=9.1e-06  Score=70.84  Aligned_cols=76  Identities=16%  Similarity=0.131  Sum_probs=49.8

Q ss_pred             EeEeCCccccceEEEEeC-Cc-c--EEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEe
Q 020393           54 ICPVGGGCINLASRYGTD-AG-S--FFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIME  125 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~--~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e  125 (326)
                      .+.+|.|..+.||+.+.. ++ .  +.+|....    .....+..|.+++..+.++  -.+-+++..... .+..++|||
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~H--pnIv~~~~~~~~-~~~~~iV~e   91 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEH-RGYLYLAIE   91 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC--TTBCCEEEEEEE-TTEEEEEEC
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCC--CCEeeEEEEEec-CCeeEEEEE
Confidence            356899999999998753 33 2  33444322    2345577898888777433  235666665443 578899999


Q ss_pred             eecCCCC
Q 020393          126 FIEFGSS  132 (326)
Q Consensus       126 ~l~G~~~  132 (326)
                      |++|+++
T Consensus        92 y~~~g~L   98 (309)
T d1fvra_          92 YAPHGNL   98 (309)
T ss_dssp             CCTTCBH
T ss_pred             ecCCCcH
Confidence            9999876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=3.4e-05  Score=67.11  Aligned_cols=76  Identities=14%  Similarity=0.151  Sum_probs=51.1

Q ss_pred             EeEeCCccccceEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEE
Q 020393           54 ICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYI  122 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~  122 (326)
                      .+.+|.|....||+.+..      .+ .+.+|.-....    ...+..|+.++..+.++  -.+-+++..... .+..++
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~H--pnIv~~~g~~~~-~~~~~l  104 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MNIVNLLGACTI-GGPTLV  104 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SSSCEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCC--CCEEEEEEEEee-CCEEEE
Confidence            567899999999998742      22 57788765421    23456788888887543  224455555433 467899


Q ss_pred             EEeeecCCCC
Q 020393          123 IMEFIEFGSS  132 (326)
Q Consensus       123 v~e~l~G~~~  132 (326)
                      +|||++|+++
T Consensus       105 vmE~~~~g~l  114 (311)
T d1t46a_         105 ITEYCCYGDL  114 (311)
T ss_dssp             EEECCTTEEH
T ss_pred             EEEcCCCCCH
Confidence            9999998764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.84  E-value=2.7e-05  Score=67.40  Aligned_cols=82  Identities=15%  Similarity=0.174  Sum_probs=55.6

Q ss_pred             CCcceeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeeccc
Q 020393           47 KATHITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGAL  115 (326)
Q Consensus        47 ~~~~v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~  115 (326)
                      +..+..-++.+|.|....||+.+..      ++ .+.+|.-....    ...+..|..+++.+..   -.+.+++.....
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h---~niv~~~~~~~~   87 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN---PNIVKLLGVCAV   87 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCC---CCcccceeeecc
Confidence            4345666788999999999999753      22 57788765421    2346788888877743   234455554433


Q ss_pred             CCCceEEEEeeecCCCC
Q 020393          116 PTGGSYIIMEFIEFGSS  132 (326)
Q Consensus       116 ~~~~~~~v~e~l~G~~~  132 (326)
                       .+..+++||+++++++
T Consensus        88 -~~~~~~v~e~~~~g~L  103 (301)
T d1lufa_          88 -GKPMCLLFEYMAYGDL  103 (301)
T ss_dssp             -SSSCEEEEECCTTCBH
T ss_pred             -CCceEEEEEecCCCcH
Confidence             5688999999998764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=6.3e-05  Score=64.44  Aligned_cols=78  Identities=23%  Similarity=0.164  Sum_probs=49.8

Q ss_pred             ceeeEeEeCCccccceEEEEeCC--c----cEEEEecCCC-C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           50 HITKICPVGGGCINLASRYGTDA--G----SFFVKTNRSI-G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~~--~----~~vlK~~~~~-~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      .....+.+|.|..+.||+.....  +    .+.+|..... .   ...+.+|+.+++.|..   -.+-+++..... .+.
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H---~nIv~~~g~~~~-~~~   83 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH---HNIIRLEGVISK-YKP   83 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC---TTBCCEEEEECS-SSS
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCC---CCEeeeeEEEec-CCc
Confidence            34445568999999999976432  1    4677876432 1   2345678887777642   235556655432 468


Q ss_pred             eEEEEeeecCCC
Q 020393          120 SYIIMEFIEFGS  131 (326)
Q Consensus       120 ~~~v~e~l~G~~  131 (326)
                      .+++||++++..
T Consensus        84 ~~~v~e~~~~~~   95 (283)
T d1mqba_          84 MMIITEYMENGA   95 (283)
T ss_dssp             EEEEEECCTTEE
T ss_pred             eEEEEEecccCc
Confidence            899999998754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=3.6e-05  Score=67.75  Aligned_cols=73  Identities=15%  Similarity=-0.025  Sum_probs=50.0

Q ss_pred             EeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc---CCCceEEEEeeecCC
Q 020393           56 PVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL---PTGGSYIIMEFIEFG  130 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~---~~~~~~~v~e~l~G~  130 (326)
                      .+|.|..+.||+.... ++ .|.+|+-..  ...+..|..++..+..+  -.+.+++.....   .....|+||||++|+
T Consensus        19 ~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~--~~~~~~E~~~~~~~~~h--pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg   94 (335)
T d2ozaa1          19 VLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQC--PHIVRIVDVYENLYAGRKCLLIVMECLDGG   94 (335)
T ss_dssp             EEEECSSCEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTS--TTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             EeeeccCeEEEEEEECCCCCEEEEEEECC--cHHHHHHHHHHHHhcCC--CCCCeEEEEEeecccCCCEEEEEEECCCCC
Confidence            3899999999999863 33 788998754  34567788876655443  246666654321   134679999999987


Q ss_pred             CC
Q 020393          131 SS  132 (326)
Q Consensus       131 ~~  132 (326)
                      ++
T Consensus        95 ~L   96 (335)
T d2ozaa1          95 EL   96 (335)
T ss_dssp             EH
T ss_pred             cH
Confidence            54

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=3.6e-05  Score=66.48  Aligned_cols=81  Identities=17%  Similarity=0.158  Sum_probs=47.4

Q ss_pred             ceeeEeEeCCccccceEEEEeC------Cc-cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD------AG-SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~------~~-~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..=.+.+|.|.++.||+.+..      ++ .+.+|.-....    ...+..|...+..+..+  -.+...+......++
T Consensus        14 ~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h--~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH--LNVVNLLGACTKPGG   91 (299)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECSTTS
T ss_pred             HEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCC--CeEEEeeeeeccCCC
Confidence            4445678999999999998742      12 46678764321    12344555556555443  223334433322245


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..+++|||++|+++
T Consensus        92 ~~~iv~E~~~~g~L  105 (299)
T d1ywna1          92 PLMVIVEFCKFGNL  105 (299)
T ss_dssp             CCEEEEECCTTCBH
T ss_pred             eEEEEEEecCCCcH
Confidence            67999999998765

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=4.5e-05  Score=66.41  Aligned_cols=74  Identities=14%  Similarity=0.165  Sum_probs=47.6

Q ss_pred             EeCCccccceEEEEeCC--c---cEEEEecCC-CC---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEee
Q 020393           56 PVGGGCINLASRYGTDA--G---SFFVKTNRS-IG---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEF  126 (326)
Q Consensus        56 ~l~~G~~n~~y~v~~~~--~---~~vlK~~~~-~~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~  126 (326)
                      .+|.|..+.||+.+..+  +   .+.+|.-.. ..   ...+..|++++..|..   -.+-+++......++..++||||
T Consensus        34 ~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH---PNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCC---TTBCCCCEEEEETTTEEEEEEEC
T ss_pred             EEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC---CCEeEEeEEEEecCCceEEEEEE
Confidence            47999999999987632  2   255676543 11   2446788887776642   23455555433225688999999


Q ss_pred             ecCCCC
Q 020393          127 IEFGSS  132 (326)
Q Consensus       127 l~G~~~  132 (326)
                      ++|..+
T Consensus       111 ~~~g~l  116 (311)
T d1r0pa_         111 MKHGDL  116 (311)
T ss_dssp             CTTCBH
T ss_pred             eecCch
Confidence            998653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=4e-05  Score=66.55  Aligned_cols=79  Identities=19%  Similarity=0.142  Sum_probs=50.6

Q ss_pred             ceeeEeEeCCccccceEEEEeC-------CccEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCC
Q 020393           50 HITKICPVGGGCINLASRYGTD-------AGSFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTG  118 (326)
Q Consensus        50 ~v~~v~~l~~G~~n~~y~v~~~-------~~~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~  118 (326)
                      +..-.+.+|.|..+.||+.+..       +..+.+|.-....    ...+..|+.+++.+..   -.+-+++..... ++
T Consensus        21 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h---~nIv~~~~~~~~-~~   96 (308)
T d1p4oa_          21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC---HHVVRLLGVVSQ-GQ   96 (308)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC---TTBCCEEEEECS-SS
T ss_pred             HeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCC---CCEeeeeeEEec-CC
Confidence            5566678999999999997642       1257788765421    1235567666655532   134444444322 56


Q ss_pred             ceEEEEeeecCCCC
Q 020393          119 GSYIIMEFIEFGSS  132 (326)
Q Consensus       119 ~~~~v~e~l~G~~~  132 (326)
                      ..++|||+++++++
T Consensus        97 ~~~lv~e~~~~g~l  110 (308)
T d1p4oa_          97 PTLVIMELMTRGDL  110 (308)
T ss_dssp             SCEEEEECCTTCBH
T ss_pred             ceeEEEeecCCCCH
Confidence            88999999998765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=0.00011  Score=63.43  Aligned_cols=77  Identities=17%  Similarity=0.091  Sum_probs=45.1

Q ss_pred             eEeEeCCccccceEEEEeCC-c--------cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           53 KICPVGGGCINLASRYGTDA-G--------SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~~-~--------~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      =.+.+|.|....||+++... +        .+.+|......    ...+..|...+..+..+  -.+.+++..... ++.
T Consensus        17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~H--pnIv~~~~~~~~-~~~   93 (299)
T d1fgka_          17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH--KNIINLLGACTQ-DGP   93 (299)
T ss_dssp             EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCC--TTBCCEEEEECS-SSS
T ss_pred             EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCC--CeEEeccccccc-CCe
Confidence            34678999999999987421 1        46778765432    23355677777666443  234445544332 578


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++||||++|+.+
T Consensus        94 ~~~v~e~~~~g~l  106 (299)
T d1fgka_          94 LYVIVEYASKGNL  106 (299)
T ss_dssp             CEEEECCCTTCBH
T ss_pred             EEEEEEccCCCcH
Confidence            9999999999765

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.74  E-value=7.5e-05  Score=64.30  Aligned_cols=74  Identities=16%  Similarity=0.042  Sum_probs=51.5

Q ss_pred             EeEeCCccccceEEEEeC-Cc-cEEEEecCC-CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEEeeecCC
Q 020393           54 ICPVGGGCINLASRYGTD-AG-SFFVKTNRS-IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIMEFIEFG  130 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~-~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~e~l~G~  130 (326)
                      .+.+|.|..+.||+.... ++ .+.+|+... .....+..|.++++.+...  -.++.+...... .+..+++||++.|.
T Consensus        12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~--~~i~~~~~~~~~-~~~~~ivme~~~~~   88 (299)
T d1ckia_          12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG--VGIPTIRWCGAE-GDYNVMVMELLGPS   88 (299)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTS--TTCCCEEEEEEE-TTEEEEEEECCCCB
T ss_pred             eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCC--CcccEEEEEEec-CCEEEEEEEEcCCc
Confidence            467899999999999753 34 677897643 2334577899998888653  335555544332 56889999998664

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=2.3e-05  Score=69.39  Aligned_cols=74  Identities=8%  Similarity=-0.038  Sum_probs=48.0

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeeccc----C-CCceEEEEe
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGAL----P-TGGSYIIME  125 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~----~-~~~~~~v~e  125 (326)
                      .++.+|.|..+.||+.... ++ .|.+|...... .....|.++++.|..   -.+.+++..-..    . ....+++||
T Consensus        24 ~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~Ei~il~~l~h---~niv~~~~~~~~~~~~~~~~~~~lv~E   99 (350)
T d1q5ka_          24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDH---CNIVRLRYFFYSSGEKKDEVYLNLVLD   99 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-SSCCHHHHHHHHCCC---TTBCCEEEEEEEC--CCSCCEEEEEEE
T ss_pred             eeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc-hHHHHHHHHHHhcCC---CCCCcEEEEEEecCccCCceEEEEEEe
Confidence            3456899999999999874 34 67788875432 334579988888753   234555443211    1 224589999


Q ss_pred             eecCC
Q 020393          126 FIEFG  130 (326)
Q Consensus       126 ~l~G~  130 (326)
                      |++|.
T Consensus       100 y~~~~  104 (350)
T d1q5ka_         100 YVPET  104 (350)
T ss_dssp             CCSEE
T ss_pred             ccCCc
Confidence            99874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=9e-05  Score=63.92  Aligned_cols=78  Identities=15%  Similarity=0.111  Sum_probs=49.6

Q ss_pred             eEeEeCCccccceEEEEe-C-Ccc-EEEEecCC-----CCcchHHHHHHHHHHHHhcCCCCCcceeeecc---c-CCCce
Q 020393           53 KICPVGGGCINLASRYGT-D-AGS-FFVKTNRS-----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGA---L-PTGGS  120 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~-~-~~~-~vlK~~~~-----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~---~-~~~~~  120 (326)
                      -++.+|.|..+.||++.. . +++ +.+|.-..     ........|..+++.|+...--.+.+++....   . ..+..
T Consensus        11 i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~   90 (305)
T d1blxa_          11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   90 (305)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred             EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceE
Confidence            356789999999999975 3 355 45787532     12334568899999987521123455554321   1 13467


Q ss_pred             EEEEeeecCC
Q 020393          121 YIIMEFIEFG  130 (326)
Q Consensus       121 ~~v~e~l~G~  130 (326)
                      +++||+++|.
T Consensus        91 ~~~~e~~~~~  100 (305)
T d1blxa_          91 TLVFEHVDQD  100 (305)
T ss_dssp             EEEEECCSCB
T ss_pred             EEEEEeccCC
Confidence            9999999885

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00011  Score=63.81  Aligned_cols=76  Identities=16%  Similarity=0.178  Sum_probs=47.8

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC-----CcchHHHHHHHHHHHHhcCCCCCcceeeecccC-------C
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI-----GPSMFEGEALGLGAMYETRTIRAPRPFKVGALP-------T  117 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~-----~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-------~  117 (326)
                      .-++.+|.|..+.||+.... ++ .|.+|+....     ....+..|..+|+.|...   .+.+++..-...       +
T Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~---nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          13 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE---NVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCT---TBCCEEEEEEC---------
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCC---CccceEeeeecccccccccC
Confidence            34678999999999999863 44 6888975321     234466899999888532   233444321110       3


Q ss_pred             CceEEEEeeecCC
Q 020393          118 GGSYIIMEFIEFG  130 (326)
Q Consensus       118 ~~~~~v~e~l~G~  130 (326)
                      +..+++||++++.
T Consensus        90 ~~~~iv~e~~~~~  102 (318)
T d3blha1          90 GSIYLVFDFCEHD  102 (318)
T ss_dssp             -CEEEEEECCCEE
T ss_pred             ceEEEEEeccCCC
Confidence            4679999998764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=0.0002  Score=62.86  Aligned_cols=74  Identities=18%  Similarity=0.110  Sum_probs=41.6

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCCC-----cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCc
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSIG-----PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGG  119 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~~-----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~  119 (326)
                      .-++.+|.|..+.||+.... ++ .|.+|......     ...+..|.++|+.+...   .+.+++......     ...
T Consensus        21 ~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hp---niv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          21 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE---NVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBT---TBCCCSEEECSCSSTTTCCC
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCC---CeeEEEEEeccCccccccce
Confidence            45678999999999999753 35 57789875321     12355788888777431   233444432211     235


Q ss_pred             eEEEEeeec
Q 020393          120 SYIIMEFIE  128 (326)
Q Consensus       120 ~~~v~e~l~  128 (326)
                      .|++||++.
T Consensus        98 ~~lv~e~~~  106 (346)
T d1cm8a_          98 FYLVMPFMG  106 (346)
T ss_dssp             CEEEEECCS
T ss_pred             EEEEEeccc
Confidence            699999983

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=0.00013  Score=63.39  Aligned_cols=77  Identities=18%  Similarity=0.172  Sum_probs=51.4

Q ss_pred             eeeEeEeCCccccceEEEEeC-Cc-----cEEEEecCC----CCcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCce
Q 020393           51 ITKICPVGGGCINLASRYGTD-AG-----SFFVKTNRS----IGPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGS  120 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~-~~-----~~vlK~~~~----~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~  120 (326)
                      -.-++.+|.|..+.||+.... ++     ++.+|.-..    .....+..|+.+++.|..   -.+.+++....  ++..
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~--~~~~   85 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN---PHVCRLLGICL--TSTV   85 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCC---TTBCCEEEEEE--SSSE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cCCe
Confidence            455678899999999998653 33     466776532    123456789988888743   24556666543  4678


Q ss_pred             EEEEeeecCCCC
Q 020393          121 YIIMEFIEFGSS  132 (326)
Q Consensus       121 ~~v~e~l~G~~~  132 (326)
                      +++|++..+..+
T Consensus        86 ~~v~e~~~~~~l   97 (317)
T d1xkka_          86 QLITQLMPFGCL   97 (317)
T ss_dssp             EEEEECCTTCBH
T ss_pred             eEEEEeccCCcc
Confidence            899999987644

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=5.9e-05  Score=64.23  Aligned_cols=74  Identities=12%  Similarity=-0.103  Sum_probs=50.4

Q ss_pred             eEeCCccccceEEEEeC-Cc-cEEEEecCCC---------CcchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEE
Q 020393           55 CPVGGGCINLASRYGTD-AG-SFFVKTNRSI---------GPSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYII  123 (326)
Q Consensus        55 ~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~---------~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v  123 (326)
                      +.+|.|..+.||+.... ++ .+.+|.....         ....+..|..+++.+...- -.+.+++..... .+..+++
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h-~nIv~~~~~~~~-~~~~~lv   87 (273)
T d1xwsa_          10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF-SGVIRLLDWFER-PDSFVLI   87 (273)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSS-CSBCCEEEEEEC-SSEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCC-CCccEEEEEEee-CCeEEEE
Confidence            56888999999998753 34 6888865321         1233568999998886321 236666665443 5688999


Q ss_pred             EeeecCC
Q 020393          124 MEFIEFG  130 (326)
Q Consensus       124 ~e~l~G~  130 (326)
                      ||+.+|.
T Consensus        88 ~e~~~~~   94 (273)
T d1xwsa_          88 LERPEPV   94 (273)
T ss_dssp             EECCSSE
T ss_pred             EEeccCc
Confidence            9999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=9e-05  Score=63.01  Aligned_cols=77  Identities=19%  Similarity=0.134  Sum_probs=48.5

Q ss_pred             eeeEeEeCCccccceEEEEeCC--c---cEEEEecCCCC----cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceE
Q 020393           51 ITKICPVGGGCINLASRYGTDA--G---SFFVKTNRSIG----PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSY  121 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~~~--~---~~vlK~~~~~~----~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~  121 (326)
                      ..=.+.+|.|..+.||+.....  +   .+.+|.-....    ...+..|..+++.+..   -.+.+++....  ++..+
T Consensus         9 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~~~~~--~~~~~   83 (273)
T d1mp8a_           9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH---PHIVKLIGVIT--ENPVW   83 (273)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC---TTBCCEEEEEC--SSSCE
T ss_pred             eEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC---CCEeeEEEEEe--cCeEE
Confidence            3335678999999999986532  2   24556544321    2346678877766632   23555665443  46889


Q ss_pred             EEEeeecCCCC
Q 020393          122 IIMEFIEFGSS  132 (326)
Q Consensus       122 ~v~e~l~G~~~  132 (326)
                      +|||+++|+.+
T Consensus        84 iv~E~~~~g~l   94 (273)
T d1mp8a_          84 IIMELCTLGEL   94 (273)
T ss_dssp             EEEECCTTEEH
T ss_pred             EEEEeccCCcH
Confidence            99999998654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=9.3e-05  Score=63.03  Aligned_cols=77  Identities=19%  Similarity=0.169  Sum_probs=45.5

Q ss_pred             eeeEeEeCCccccceEEEEe--CCc---cEEEEecCCC---C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCc
Q 020393           51 ITKICPVGGGCINLASRYGT--DAG---SFFVKTNRSI---G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGG  119 (326)
Q Consensus        51 v~~v~~l~~G~~n~~y~v~~--~~~---~~vlK~~~~~---~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~  119 (326)
                      ..=++.+|.|..+.||+...  .++   .+.+|.....   .   ...+..|..+++.+..   -.+.+++....  ++.
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H---~nIv~~~g~~~--~~~   84 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH---RNLIRLYGVVL--TPP   84 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC---TTBCCEEEEEC--SSS
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEe--ecc
Confidence            34466799999999999864  222   4667765431   1   2346788888887742   24556666543  357


Q ss_pred             eEEEEeeecCCCC
Q 020393          120 SYIIMEFIEFGSS  132 (326)
Q Consensus       120 ~~~v~e~l~G~~~  132 (326)
                      .++||||.++..+
T Consensus        85 ~~lv~e~~~~~~l   97 (273)
T d1u46a_          85 MKMVTELAPLGSL   97 (273)
T ss_dssp             CEEEEECCTTCBH
T ss_pred             hheeeeeecCcch
Confidence            7999999997643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.0001  Score=65.22  Aligned_cols=75  Identities=12%  Similarity=0.126  Sum_probs=47.0

Q ss_pred             eEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccC-----CCce
Q 020393           53 KICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALP-----TGGS  120 (326)
Q Consensus        53 ~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~-----~~~~  120 (326)
                      -++.+|.|..+.||+.... +| .|.+|+.+..  .   ...+..|..+++.+..   -.+.+++..-...     ....
T Consensus        21 i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h---pnIv~~~~~f~~~~~~~~~~~~   97 (355)
T d2b1pa1          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH---KNIISLLNVFTPQKTLEEFQDV   97 (355)
T ss_dssp             EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCC---TTBCCCSEEECSCCSTTTCCEE
T ss_pred             EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCC---CCeeEEEEEEecccccccCcee
Confidence            3568899999999999754 34 7888987532  1   1235578887777642   1344444432211     3577


Q ss_pred             EEEEeeecCC
Q 020393          121 YIIMEFIEFG  130 (326)
Q Consensus       121 ~~v~e~l~G~  130 (326)
                      |++||++.|.
T Consensus        98 ~iv~Ey~~~~  107 (355)
T d2b1pa1          98 YLVMELMDAN  107 (355)
T ss_dssp             EEEEECCSEE
T ss_pred             EEEEeccchH
Confidence            9999999875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.00028  Score=60.08  Aligned_cols=75  Identities=17%  Similarity=0.082  Sum_probs=49.1

Q ss_pred             eeEeEeCCccccceEEEEeC-Cc-cEEEEecCCC--C---cchHHHHHHHHHHHHhcCCCCCcceeeecccCCCceEEEE
Q 020393           52 TKICPVGGGCINLASRYGTD-AG-SFFVKTNRSI--G---PSMFEGEALGLGAMYETRTIRAPRPFKVGALPTGGSYIIM  124 (326)
Q Consensus        52 ~~v~~l~~G~~n~~y~v~~~-~~-~~vlK~~~~~--~---~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~~~~~~~~~v~  124 (326)
                      .-++.+|.|..+.||+.+.. ++ .|.+|+....  .   ...+..|..+++.+..   -.+.+++..... ....++++
T Consensus         5 ~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h---~niv~~~~~~~~-~~~~~iv~   80 (292)
T d1unla_           5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH---KNIVRLHDVLHS-DKKLTLVF   80 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC---TTBCCEEEEEEC-SSEEEEEE
T ss_pred             EeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCc---CCEEeecccccc-ccceeEEe
Confidence            34678999999999999863 44 5778985421  1   2345678877776643   234555544332 45778889


Q ss_pred             eeecCC
Q 020393          125 EFIEFG  130 (326)
Q Consensus       125 e~l~G~  130 (326)
                      ++..|.
T Consensus        81 ~~~~~~   86 (292)
T d1unla_          81 EFCDQD   86 (292)
T ss_dssp             ECCSEE
T ss_pred             eecccc
Confidence            988775

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.15  E-value=0.012  Score=50.99  Aligned_cols=47  Identities=15%  Similarity=0.013  Sum_probs=35.1

Q ss_pred             EeEeCCccccceEEEEe-CCc-cEEEEecCCCC--cchHHHHHHHHHHHHh
Q 020393           54 ICPVGGGCINLASRYGT-DAG-SFFVKTNRSIG--PSMFEGEALGLGAMYE  100 (326)
Q Consensus        54 v~~l~~G~~n~~y~v~~-~~~-~~vlK~~~~~~--~~~~~~E~~~l~~L~~  100 (326)
                      ++.+|.|..+.||++.. .+| .|.+|+.....  ......|..+++.+..
T Consensus        18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~   68 (362)
T d1q8ya_          18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND   68 (362)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcc
Confidence            67899999999999975 344 68889876431  2445678888888865

>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Actin-fragmin kinase, catalytic domain
domain: Actin-fragmin kinase, catalytic domain
species: Physarum polycephalum [TaxId: 5791]

Probab=93.79  E-value=0.22  Score=41.86  Aligned_cols=70  Identities=17%  Similarity=0.174  Sum_probs=48.2

Q ss_pred             eCCccccceEEEEeCCccEEEEecCCCCcchHHHHHHHHHHHHhcCCCCCcceeeecc------------------cC--
Q 020393           57 VGGGCINLASRYGTDAGSFFVKTNRSIGPSMFEGEALGLGAMYETRTIRAPRPFKVGA------------------LP--  116 (326)
Q Consensus        57 l~~G~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~l~~L~~~~~~~vP~~~~~~~------------------~~--  116 (326)
                      ++.+....++.|.+++|.+|+|..+.     ...|+-.. .|+...++|||+..-...                  ..  
T Consensus        76 ~s~~Gs~Gv~FV~~e~gaiVlK~s~t-----ta~E~y~~-eLAr~LGvpvPqmRvI~~~~~E~~~~~~~~l~~~e~d~~I  149 (342)
T d1cjaa_          76 RSEKGTEGLFFVETESGVFIVKRSTN-----IESETFCS-LLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI  149 (342)
T ss_dssp             ECCSTTSCEEEEEESSCEEEEECCTT-----HHHHHHHH-HHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred             EeecCCceEEEEEcCCceEEEecCCc-----hHHHHHHH-HHHHHhCCCCCceEEecCCCHHHHHHHHHHhcCCChhHHH
Confidence            44455567899999999999999653     34455433 344445899998765431                  00  


Q ss_pred             ----CCceEEEEeeecCCCC
Q 020393          117 ----TGGSYIIMEFIEFGSS  132 (326)
Q Consensus       117 ----~~~~~~v~e~l~G~~~  132 (326)
                          ....+++|||++|.++
T Consensus       150 ~sel~~A~~liMeYvpG~~l  169 (342)
T d1cjaa_         150 TTLANQANILLMELVRGITL  169 (342)
T ss_dssp             HHHTTCSEEEEEECCCEEES
T ss_pred             HHHHhcccceeeeccCCccc
Confidence                2467999999999876