Citrus Sinensis ID: 020405

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Secondary Structure (PSIPRED)
ccEEEEccccccccccHHcHHHHHcccEEEEEEEEcccccccccccccccccccEEEEEEEEHHHHHHHHHccccccccccccEEccEEEEEccccccccccccccccccccccccccccEEEEEEEEEEEEEcHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHccccccccHHHHHHHHHccccEEccccccEEccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccEccccccccHHHHHHHHcccEEEEEEEEcccccccccccccHcccccEEEEEEEccccHHHHHHccccccccccccEEEEEEEEEEcccccccHHHcccccccccHHHccccEEEEEEEccEEEEccHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHcccccEccccHHHHHHHHHHcccccccccccEEEEcHHHHHcccccccccccccccccccccccccEEcccEEEEcccc
Coil and Loop (DISEMBL)
mkvhcgfmrnggaemspldvkYVKKCKFVVASgifdgydvphqpsnisrRSKKLFCFLMVMDEVSLKFIRKNvtikedsaggqwVGIWRLILlkhppydeprrngkvpkilthrlfpqaqysiwidgkmeliVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRyegmepwsikkntvsdvpegAVIIREHTALSNLFSClwfnevnlltprdqlsFGYVVYRLKGLFkfymfpnceynslfvlhphtrehsskiewVKSRdelkgngssmiegrgglgfwtpypgnldlvvlppvartskag
Flexible Loop (DISEMBL)
mkvhcgfmrnggaemspldVKYVKKCKFVVASGIFdgydvphqpsniSRRSKKLFCFLMVMDEVSLKFIRKNvtikedsaggqwvGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFaiaqhkhhrsiyeeadankrrkryarplidYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTrehsskiewvksrDELKGNGSSMIEGRGGLGFWTPYPGNldlvvlppvartskag
Low Complexity Region (SEG)
MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Disordered region (IsUnstruct)
******FM****AEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTRE***KIEWV*************IEGRGGLGFWTPYPGNLDLVVLPP********
Disordered Region (DISOPRED)
MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIR********SAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHT*****************************LGFWTPYPGNLDLVVLPP*AR*****
Disordered Region (DISEMBL)
MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Disordered Region (DISPRO)
MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVART****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
255560495	499	conserved hypothetical protein [Ricinus	1.0	0.653	0.858	1e-170
297744567	520	unnamed protein product [Vitis vinifera]	1.0	0.626	0.852	1e-168
225428094	500	PREDICTED: uncharacterized protein LOC10	1.0	0.652	0.852	1e-168
147827594	500	hypothetical protein VITISV_038566 [Viti	1.0	0.652	0.846	1e-167
224103151	510	predicted protein [Populus trichocarpa]	1.0	0.639	0.855	1e-167
224080650	486	predicted protein [Populus trichocarpa]	1.0	0.670	0.843	1e-165
449461197	517	PREDICTED: uncharacterized protein LOC10	1.0	0.630	0.803	1e-162
297797838	497	hypothetical protein ARALYDRAFT_490610 [	1.0	0.655	0.837	1e-162
449507043	517	PREDICTED: uncharacterized protein LOC10	1.0	0.630	0.803	1e-162
312282621	500	unnamed protein product [Thellungiella h	1.0	0.652	0.834	1e-161

>gi|255560495|ref|XP_002521262.1| conserved hypothetical protein [Ricinus communis] gi|223539530|gb|EEF41118.1| conserved hypothetical protein [Ricinus communis]

 Score =  602 bits (1552), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 280/326 (85%), Positives = 303/326 (92%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           M VHCGF+RNGGA+M P+D+ YVK+C+FVVASGIFDGYDVPHQPSNIS RSKKLFCFLMV
Sbjct: 174 MNVHCGFIRNGGAKMDPMDINYVKRCRFVVASGIFDGYDVPHQPSNISDRSKKLFCFLMV 233

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DEVSL FI++N T++ED+ GGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ
Sbjct: 234 VDEVSLDFIKENATVREDNEGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 293

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMELIVDPLL+LERYLWRGK+TFAIAQHKHH SIYEEADANKRRKRYARPLID
Sbjct: 294 YSIWIDGKMELIVDPLLMLERYLWRGKNTFAIAQHKHHHSIYEEADANKRRKRYARPLID 353

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIYRYEGMEPWS+KK+TVSDVPEGAVIIREHT L+NLFSCLWFNEV+L TPRDQLSF
Sbjct: 354 LHMKIYRYEGMEPWSLKKSTVSDVPEGAVIIREHTPLNNLFSCLWFNEVHLFTPRDQLSF 413

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVV+RL   FKF+MFPNCEYNSLFVLHPHTREHSSK+EWVKS +E KG+GSSM E RGG
Sbjct: 414 GYVVFRLGDAFKFFMFPNCEYNSLFVLHPHTREHSSKVEWVKSLNEFKGSGSSMKESRGG 473

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
           LG WTPYPGNLD VVLP V RTSKAG
Sbjct: 474 LGLWTPYPGNLDSVVLPQVVRTSKAG 499

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744567|emb|CBI37829.3| unnamed protein product [Vitis vinifera]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 278/326 (85%), Positives = 299/326 (91%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM+NGGAEM+P+D+ Y KKC+FVVASGIFDGYD PH+PS+IS RSKKLFCFLMV
Sbjct: 195 MKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDISARSKKLFCFLMV 254

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           MDE+SL FI+KNVT+KED  GG WVGIWRL+LLKHPPYDEPRRNGKVPKILTHRLFP+AQ
Sbjct: 255 MDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVPKILTHRLFPEAQ 314

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHH SIYEEADA KRRKRYARPLID
Sbjct: 315 YSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAIKRRKRYARPLID 374

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIY YEGM+PWS KK T+SDVPEGAVIIREHTAL+NLFSCLWFNEVNL TPRDQLSF
Sbjct: 375 LHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNEVNLFTPRDQLSF 434

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVVYRL GLFKF+MFPNCEYNSLFVLHPHTREHSS +EWVKS DE K N + + E RGG
Sbjct: 435 GYVVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFKTNKTGLKESRGG 494

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
           LG WTPYPGNLD V+LPPVARTSKAG
Sbjct: 495 LGLWTPYPGNLDSVILPPVARTSKAG 520

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428094|ref|XP_002280425.1| PREDICTED: uncharacterized protein LOC100255620 [Vitis vinifera]

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 278/326 (85%), Positives = 299/326 (91%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM+NGGAEM+P+D+ Y KKC+FVVASGIFDGYD PH+PS+IS RSKKLFCFLMV
Sbjct: 175 MKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDISARSKKLFCFLMV 234

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           MDE+SL FI+KNVT+KED  GG WVGIWRL+LLKHPPYDEPRRNGKVPKILTHRLFP+AQ
Sbjct: 235 MDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVPKILTHRLFPEAQ 294

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHH SIYEEADA KRRKRYARPLID
Sbjct: 295 YSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAIKRRKRYARPLID 354

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIY YEGM+PWS KK T+SDVPEGAVIIREHTAL+NLFSCLWFNEVNL TPRDQLSF
Sbjct: 355 LHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNEVNLFTPRDQLSF 414

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVVYRL GLFKF+MFPNCEYNSLFVLHPHTREHSS +EWVKS DE K N + + E RGG
Sbjct: 415 GYVVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFKTNKTGLKESRGG 474

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
           LG WTPYPGNLD V+LPPVARTSKAG
Sbjct: 475 LGLWTPYPGNLDSVILPPVARTSKAG 500

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147827594|emb|CAN61976.1| hypothetical protein VITISV_038566 [Vitis vinifera]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 276/326 (84%), Positives = 298/326 (91%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM+NGGAEM+P+D+ Y KKC+FVVASGIFDGYD PH+PS+IS RSKKLFCFLMV
Sbjct: 175 MKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDISARSKKLFCFLMV 234

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           MDE+SL FI+KNVT+KED  GG WVGIWRL+LLKHPPYDEPRRNGKVPKILTHRLFP+AQ
Sbjct: 235 MDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVPKILTHRLFPEAQ 294

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMEL+VDPLLILERYLWRGKHTFAIAQHKHH SIYEEADA KRRKRYARPLID
Sbjct: 295 YSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAIKRRKRYARPLID 354

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIY YEGM+PWS KK T+SDVPEGAVIIREHTAL+NLFSCLWFNEVNL TPRDQLSF
Sbjct: 355 LHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNEVNLFTPRDQLSF 414

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GY+VYRL GLFKF+MFPNCEYNSLFVLHPHTREHSS +EWVKS DE K N + + E RGG
Sbjct: 415 GYIVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFKTNKTGLKESRGG 474

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
           LG WT YPGNLD V+LPPVARTSKAG
Sbjct: 475 LGLWTTYPGNLDSVILPPVARTSKAG 500

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103151|ref|XP_002312945.1| predicted protein [Populus trichocarpa] gi|222849353|gb|EEE86900.1| predicted protein [Populus trichocarpa]

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 279/326 (85%), Positives = 298/326 (91%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM NGGA+M P+D+KYV+KC+FVVASGIFDGYDVPHQPSNIS RSK+LFCFLMV
Sbjct: 185 MKVHCGFMHNGGADMDPVDIKYVEKCRFVVASGIFDGYDVPHQPSNISDRSKELFCFLMV 244

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DE+SL+FI++NVT+ ED   GQWVGIWRLILLKH PYDEPRRNGKVPKILTHRLFPQAQ
Sbjct: 245 VDEISLEFIKENVTVWEDHNRGQWVGIWRLILLKHSPYDEPRRNGKVPKILTHRLFPQAQ 304

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMELIVDPL ILERYLW GK+TFAIAQHKHHRSIYEEADANKRRKRYARPLID
Sbjct: 305 YSIWIDGKMELIVDPLQILERYLWHGKNTFAIAQHKHHRSIYEEADANKRRKRYARPLID 364

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIY YEGMEPWS KK+TVSDVPEGA+IIREHTA+SNLFSCLWFNEVNL TPRDQLSF
Sbjct: 365 LHMKIYYYEGMEPWSPKKSTVSDVPEGAIIIREHTAMSNLFSCLWFNEVNLFTPRDQLSF 424

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVVYRL G FKF+MFPNCEYNSLFVLHPHTREHSSK+EWVKS  E KGNGSSM E RGG
Sbjct: 425 GYVVYRLGGAFKFFMFPNCEYNSLFVLHPHTREHSSKVEWVKSLSEFKGNGSSMKESRGG 484

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
           LG WTPYP +L  VVLP V RTSKAG
Sbjct: 485 LGLWTPYPADLKSVVLPKVVRTSKAG 510

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080650|ref|XP_002306196.1| predicted protein [Populus trichocarpa] gi|222849160|gb|EEE86707.1| predicted protein [Populus trichocarpa]

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 275/326 (84%), Positives = 298/326 (91%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM NGGA+M  +D++YVK C+FVVASGIFDGYDVPHQPSNIS RS+KLFCFLMV
Sbjct: 161 MKVHCGFMHNGGADMDLVDIEYVKNCRFVVASGIFDGYDVPHQPSNISERSRKLFCFLMV 220

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DE+SL FI++NVT++ED  GG+WVGIWRLILLKH PYDEPRRNGKVPKILTHRLFPQAQ
Sbjct: 221 VDEISLDFIKENVTVREDHNGGRWVGIWRLILLKHSPYDEPRRNGKVPKILTHRLFPQAQ 280

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMEL+VDPL ILERYLWRGK+TFAIAQHKHHRSIYEEADANKRRKRYARPLID
Sbjct: 281 YSIWIDGKMELLVDPLQILERYLWRGKNTFAIAQHKHHRSIYEEADANKRRKRYARPLID 340

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIY +EGME WS KK +VSDVPEGA+IIREHTA+SNLFSCLWFNEVNL TPRDQLSF
Sbjct: 341 LHMKIYYHEGMESWSPKKRSVSDVPEGAIIIREHTAMSNLFSCLWFNEVNLFTPRDQLSF 400

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVVYRL G F+F+MFPNCEYNSLFVLHPHTREHSSK+EWVKS  E KGNGSSM E RGG
Sbjct: 401 GYVVYRLGGAFRFFMFPNCEYNSLFVLHPHTREHSSKVEWVKSISEFKGNGSSMKESRGG 460

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
           LG WTPYPG+L  VVLP VARTSKAG
Sbjct: 461 LGLWTPYPGDLSSVVLPKVARTSKAG 486

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461197|ref|XP_004148328.1| PREDICTED: uncharacterized protein LOC101222025 [Cucumis sativus]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 274/341 (80%), Positives = 301/341 (88%), Gaps = 15/341 (4%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM+NGGAEM P D+KYVKKC+FVVASGIFDGYDVP QPSNIS RSK LFCFLMV
Sbjct: 177 MKVHCGFMQNGGAEMVPADIKYVKKCRFVVASGIFDGYDVPRQPSNISVRSKDLFCFLMV 236

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DE+S++FIR+NVTI+ED+ GG+WVGIWRL+LLK+PPYDEPRRNGKVPKILTHRLFPQAQ
Sbjct: 237 VDEISMQFIRENVTIEEDNDGGKWVGIWRLVLLKYPPYDEPRRNGKVPKILTHRLFPQAQ 296

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHH SIYEEAD+NKRRKRYARPLID
Sbjct: 297 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHCSIYEEADSNKRRKRYARPLID 356

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIYRYEGMEPWS +K +VSDVPEGA+IIREHTA++NLFSCLWFNEV++ TPRDQLSF
Sbjct: 357 LHMKIYRYEGMEPWSPEKKSVSDVPEGAIIIREHTAMNNLFSCLWFNEVHMFTPRDQLSF 416

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSM------ 294
           GYVVYRL   FKF+MFPNCEY SLF+LHPHTREHSS IEWVK  D+LKGN S+M      
Sbjct: 417 GYVVYRLGNSFKFFMFPNCEYYSLFILHPHTREHSSLIEWVKDWDQLKGNMSNMKEYKQW 476

Query: 295 ---------IEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 326
                    IE RGGLG WTPYPG+LD VVLP V R+SKAG
Sbjct: 477 KQRNAPTSLIETRGGLGLWTPYPGDLDSVVLPTVVRSSKAG 517

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797838|ref|XP_002866803.1| hypothetical protein ARALYDRAFT_490610 [Arabidopsis lyrata subsp. lyrata] gi|297312639|gb|EFH43062.1| hypothetical protein ARALYDRAFT_490610 [Arabidopsis lyrata subsp. lyrata]

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 273/326 (83%), Positives = 293/326 (89%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM  GGAEMS LD +YVKKC+FVVA+GIFD YD PHQPSNIS+RSK LFCFLMV
Sbjct: 172 MKVHCGFMPRGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPSNISKRSKNLFCFLMV 231

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DEVSL F+RKN T+++D  GG+WVGIWRLILLK PPYDEPRRNGKVPKILTHRLFP+AQ
Sbjct: 232 VDEVSLDFLRKNTTVRKDVEGGKWVGIWRLILLKTPPYDEPRRNGKVPKILTHRLFPEAQ 291

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHR+IYEEADA KRRKRYARPL+D
Sbjct: 292 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRNIYEEADACKRRKRYARPLVD 351

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIYRYEG+EPWSIKKNTVSDVPEGAVIIREHTA++NLFSCLWFNEV+LLTPRDQLSF
Sbjct: 352 LHMKIYRYEGLEPWSIKKNTVSDVPEGAVIIREHTAMNNLFSCLWFNEVHLLTPRDQLSF 411

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVV RLKG FK +MF NCEYNSLF LHPH REHSSKIEWVKS  ELKG G S+ E RGG
Sbjct: 412 GYVVDRLKGAFKVFMFQNCEYNSLFELHPHIREHSSKIEWVKSLQELKGKGESLKESRGG 471

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
            G WTPYPG+LD V LP V RTSKAG
Sbjct: 472 FGLWTPYPGDLDSVELPKVVRTSKAG 497

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507043|ref|XP_004162918.1| PREDICTED: uncharacterized protein LOC101225699 [Cucumis sativus]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 274/341 (80%), Positives = 301/341 (88%), Gaps = 15/341 (4%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM+NGGAEM P D+KYVKKC+FVVASGIFDGYDVP QPSNIS RSK LFCFLMV
Sbjct: 177 MKVHCGFMQNGGAEMVPADIKYVKKCRFVVASGIFDGYDVPRQPSNISVRSKDLFCFLMV 236

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DE+S++FIR+NVTI+ED+ GG+WVGIWRL+LLK+PPYDEPRRNGKVPKILTHRLFPQAQ
Sbjct: 237 VDEISMQFIRENVTIEEDNDGGKWVGIWRLVLLKYPPYDEPRRNGKVPKILTHRLFPQAQ 296

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHH SIYEEAD+NKRRKRYARPLID
Sbjct: 297 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHCSIYEEADSNKRRKRYARPLID 356

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIYRYEGMEPWS +K +VSDVPEGA+IIREHTA++NLFSCLWFNEV++ TPRDQLSF
Sbjct: 357 LHMKIYRYEGMEPWSPEKKSVSDVPEGAIIIREHTAMNNLFSCLWFNEVHMFTPRDQLSF 416

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSM------ 294
           GYVVYRL   FKF+MFPNCEY SLF+LHPHTREHSS IEWVK  D+LKGN S+M      
Sbjct: 417 GYVVYRLGNSFKFFMFPNCEYYSLFILHPHTREHSSLIEWVKDWDQLKGNMSNMKEYKQW 476

Query: 295 ---------IEGRGGLGFWTPYPGNLDLVVLPPVARTSKAG 326
                    IE RGGLG WTPYPG+LD VVLP V R+SKAG
Sbjct: 477 KQRNAPTSLIETRGGLGLWTPYPGDLDSVVLPTVVRSSKAG 517

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282621|dbj|BAJ34176.1| unnamed protein product [Thellungiella halophila]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/326 (83%), Positives = 291/326 (89%)

Query: 1   MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
           MKVHCGFM  GGAEMS LD +YVKKC+FVVA+GIFD YD PHQPSNIS RSK LFCFLMV
Sbjct: 175 MKVHCGFMPRGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPSNISERSKSLFCFLMV 234

Query: 61  MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
           +DEVSL F+RKN T+++D  GG+WVGIWRLILLK PPYDEPRRNGKVPKILTHRLFP+AQ
Sbjct: 235 VDEVSLDFLRKNSTLRKDVKGGKWVGIWRLILLKTPPYDEPRRNGKVPKILTHRLFPEAQ 294

Query: 121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
           YSIWIDGKMELIVDPLLILERYLWRGK TFAIAQHKHHR+IYEEADA KRRKRYARPL+D
Sbjct: 295 YSIWIDGKMELIVDPLLILERYLWRGKQTFAIAQHKHHRNIYEEADACKRRKRYARPLVD 354

Query: 181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
             MKIYRYEG+EPWSIKKNTVSDVPEGAVIIREHTA++NLFSCLWFNEV+LLTPRDQLSF
Sbjct: 355 LHMKIYRYEGLEPWSIKKNTVSDVPEGAVIIREHTAMNNLFSCLWFNEVHLLTPRDQLSF 414

Query: 241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
           GYVV RLKG FK +MF NCEYNSLF LHPH REHSSKIEWVKS  ELKG G S+ E RGG
Sbjct: 415 GYVVDRLKGAFKLFMFQNCEYNSLFELHPHIREHSSKIEWVKSLKELKGKGESLKESRGG 474

Query: 301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
            G WTPYPG+LD V LP V RTSKAG
Sbjct: 475 FGLWTPYPGDLDSVELPKVVRTSKAG 500

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
TAIR|locus:2121194	499	AT4G38500 [Arabidopsis thalian	1.0	0.653	0.834	1.4e-151
TAIR|locus:2032137	581	AT1G28240 [Arabidopsis thalian	0.825	0.462	0.445	2.1e-61
TAIR|locus:2009253	735	EMB2756 "EMBRYO DEFECTIVE 2756	0.840	0.372	0.399	3.3e-56
TAIR|locus:2136907	711	AT4G09630 [Arabidopsis thalian	0.840	0.385	0.399	5.3e-56
TAIR|locus:2037053	540	AT1G53040 [Arabidopsis thalian	0.825	0.498	0.416	3.7e-55
TAIR|locus:2056750	460	AT2G02910 [Arabidopsis thalian	0.828	0.586	0.406	8.9e-54
TAIR|locus:2165457	463	AT5G42660 [Arabidopsis thalian	0.825	0.580	0.394	7.4e-50
TAIR|locus:2162065	462	AT5G46220 [Arabidopsis thalian	0.904	0.638	0.339	9.6e-41

TAIR|locus:2121194 AT4G38500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
 Identities = 272/326 (83%), Positives = 291/326 (89%)

Query:     1 MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
             MKVHCGFM  GGAEMS LD +YVKKC+FVVA+GIFD YD PHQPSNIS+RS  LFCFLMV
Sbjct:   174 MKVHCGFMPRGGAEMSSLDKEYVKKCRFVVATGIFDAYDEPHQPSNISKRSMNLFCFLMV 233

Query:    61 MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
             +DEVSL F+RKN T+++D  GG WVGIWRLILLK PPYDEPRRNGKVPKILTHRLFP+AQ
Sbjct:   234 VDEVSLDFLRKNTTVRKDVEGGIWVGIWRLILLKTPPYDEPRRNGKVPKILTHRLFPEAQ 293

Query:   121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
             YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHR+IYEEADA KRRKRYARPL+D
Sbjct:   294 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRNIYEEADACKRRKRYARPLVD 353

Query:   181 YQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLSF 240
               MKIYRYEG+EPWSIKKNTVSDVPEGAVIIREHTA++NLFSCLWFNEV+LLTPRDQLSF
Sbjct:   354 LHMKIYRYEGLEPWSIKKNTVSDVPEGAVIIREHTAMNNLFSCLWFNEVHLLTPRDQLSF 413

Query:   241 GYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMIEGRGG 300
             GYVV RLKG FK +MF NCEYNSLF LHPH REHSSKIEWVKS  ELKG G S+ E RGG
Sbjct:   414 GYVVDRLKGAFKVFMFQNCEYNSLFELHPHIREHSSKIEWVKSLQELKGKGESLKESRGG 473

Query:   301 LGFWTPYPGNLDLVVLPPVARTSKAG 326
              G WTPYPG+LD V LP V RTSKAG
Sbjct:   474 FGLWTPYPGDLDSVELPKVVRTSKAG 499

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2032137 AT1G28240 [Arabidopsis thaliana (taxid:3702)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 126/283 (44%), Positives = 181/283 (63%)

Query:     1 MKVHCGFM------RNGGAEMSPLDVKYVKKCK-FVVASGIFDGYDVPHQPSNISRRSKK 53
             M VHCGF+      RN G ++   D+  +K+C+  VVAS +FD +D    P NIS+ +++
Sbjct:   233 MSVHCGFVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEE 292

Query:    54 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTH 113
               CF M +DE +   +++   +     G + VGIWR++++ + PY + RRNGKVPK+L H
Sbjct:   293 TVCFYMFVDEETESILKRERGLD----GNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVH 348

Query:   114 RLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKR 173
             R+FP A+YS+WIDGK+EL+VDP  ILER+LWR   TFAI++H     +  EA+ANK   +
Sbjct:   349 RMFPNARYSLWIDGKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGK 408

Query:   174 YARPLIDYQMKIYRYEGMEPWSIKKNTV-SDVPEGAVIIREHTALSNLFSCLWFNEVNLL 232
             Y    ID+Q+  Y+ EG+ P+S+ K  + SDVPEG VI+REH  +SNLF+CLWFNEV+  
Sbjct:   409 YDNASIDFQVDFYKNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRF 468

Query:   233 TPRDQLSFGYVVYRL--KGLFKFYMFPNCEYNSLFVLHPHTRE 273
             T RDQ+SF  V  ++  K  +   MF +CE  +  V   H  E
Sbjct:   469 TSRDQISFSTVRDKIAAKTNWTVSMFLDCERRNFVVQRYHRAE 511

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2009253 EMB2756 "EMBRYO DEFECTIVE 2756" [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 117/293 (39%), Positives = 178/293 (60%)

Query:     2 KVHCGFMRN--G----GAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSN--ISRRSKK 53
             K+HCGF++   G    G +++  D  Y+ +C   V+S IF   D    P+N  ISR S+K
Sbjct:   440 KIHCGFVKGPKGSSSTGFDLTEDDTNYISRCHIAVSSCIFGNSDRLRPPANKMISRLSRK 499

Query:    54 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTH 113
               CF++ +DE++++ +        D AG  ++G+W+L+++K+ PY + RR GK+PK+L H
Sbjct:   500 NVCFIVFVDEITMQTLSAEGHAP-DRAG--FIGLWKLVVVKNLPYADMRRVGKIPKMLPH 556

Query:   114 RLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKR 173
             RLFP A+YSIW+D K+ L +DPLLILE +LWR  H +AI+ H     ++EE   NK+  +
Sbjct:   557 RLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHYDRHCLWEEVAQNKKLNK 616

Query:   174 YARPLIDYQMKIYRYEGMEPWSIK---KNTVSDVPEGAVIIREHTALSNLFSCLWFNEVN 230
             Y   +I+ Q + Y+ +G+  ++     K   S+VPEG+ I+R HT +SNLFSCLWFNEV 
Sbjct:   617 YNHTVINQQFQFYKADGLTRFNASDPFKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVE 676

Query:   231 LLTPRDQLSFGYVVYRLKGL-----FKFYMFPNCEYNSLFVLHPHTREHSSKI 278
               TPRDQLSF Y   +L+ +     F  +MF +CE   +  L  H  +    +
Sbjct:   677 RFTPRDQLSFAYTYQKLRRMNPDKPFNLHMFKDCERRKIAKLFRHRSDEKRNL 729

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2136907 AT4G09630 [Arabidopsis thaliana (taxid:3702)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 117/293 (39%), Positives = 176/293 (60%)

Query:     2 KVHCGFMR--NG----GAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSN--ISRRSKK 53
             K+HCGF++   G    G +++  D  Y+ KC   V S IF   D    P+N  +S  S+K
Sbjct:   415 KIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIFGNSDRLRHPANKMVSSLSRK 474

Query:    54 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTH 113
               CF++ +DE++++ +     +  D AG  +VG+W+L+++++ PY + RR GK+PK+L H
Sbjct:   475 DVCFVVFVDEITMQTLSAEGQVP-DGAG--FVGLWKLVVVRNLPYTDMRRVGKIPKLLPH 531

Query:   114 RLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKR 173
             RLF  A+YSIW+D K+ L +DPL+ILE +LWR  H +AI+ H     ++EE   NK+  +
Sbjct:   532 RLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNHYDRHCLWEEVAQNKKLNK 591

Query:   174 YARPLIDYQMKIYRYEGMEPWSIK---KNTVSDVPEGAVIIREHTALSNLFSCLWFNEVN 230
             Y   +ID Q + Y+ +G+  ++     K   S+VPEG+ I+REHT +SNLFSCLWFNEV 
Sbjct:   592 YNHTVIDQQFEFYQSDGLTRFNASDPHKLLPSNVPEGSFIVREHTPMSNLFSCLWFNEVE 651

Query:   231 LLTPRDQLSFGYVVYRLKGL-----FKFYMFPNCEYNSLFVLHPHTREHSSKI 278
               TPRDQLSF Y   +L  +     F  +MF +CE   +  L  H  E    +
Sbjct:   652 RFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITKLFRHRSEEKRNL 704

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2037053 AT1G53040 [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 118/283 (41%), Positives = 175/283 (61%)

Query:     1 MKVHCGFMRN---GGAEMSPLDVKYVKKCK----FVVASGIFDGYDVPHQPSNISRRSKK 53
             M VHCGF++    G      +D   + +       +VAS IF  YD+  +P NIS  ++K
Sbjct:   206 MTVHCGFIKGTKPGHQTGFDIDEDILHELDQSHDVIVASAIFGKYDIIQEPVNISEMARK 265

Query:    54 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTH 113
                F M +DE +  +++   +  +D+   + VG+WR+I++ + PY + RRNGKVPK+L H
Sbjct:   266 NIPFYMFVDEETHLYLKNTSSYTDDN---KRVGLWRIIVVHNVPYTDARRNGKVPKLLLH 322

Query:   114 RLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKR 173
             RLFP  +YSIW+D K++L+VDP  ILER+LWR   +FAI++H     ++ EA+ANK  ++
Sbjct:   323 RLFPNVRYSIWVDAKLQLVVDPYQILERFLWRTNSSFAISRHYRRFDVFVEAEANKAARK 382

Query:   174 YARPLIDYQMKIYRYEGMEPWSIKKNTV-SDVPEGAVIIREHTALSNLFSCLWFNEVNLL 232
             Y    IDYQ++ Y+ EG+ P++  K  + SDVPEG  IIREH  ++NLF+C+WFNEV+  
Sbjct:   383 YDNASIDYQVEFYKKEGLTPYTEAKLPITSDVPEGCTIIREHIPITNLFTCVWFNEVDRF 442

Query:   233 TPRDQLSFGYV--VYRLKGLFKFYMFPNCEYNSLFVLHPHTRE 273
             T RDQLSF       R K  +   MF +CE  + FV   + R+
Sbjct:   443 TSRDQLSFAIARDKIREKVDWSINMFLDCERRN-FVKQVYHRD 484

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2056750 AT2G02910 [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 115/283 (40%), Positives = 167/283 (59%)

Query:     3 VHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSN--ISRRSKKLFCFLMV 60
             +HCGF++  G ++S  D  Y+K C   V+S IF   D   +P+   IS  SK+  CF+M 
Sbjct:   175 IHCGFVKGTGFDLSEKDRAYMKNCVVSVSSCIFGSSDFLRRPATKKISEFSKRNVCFVMF 234

Query:    61 MDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQ 120
             +DE +L  +     +  D  G  +VG+W+ +++ + PY++ R+ GKVPK L+HRLFP ++
Sbjct:   235 VDEQTLSKLASEGHVP-DKQG--FVGLWKTVVVSNLPYNDMRKTGKVPKFLSHRLFPSSR 291

Query:   121 YSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLID 180
             YSIW+D KM L  DP+LI++ +LWR K  FAI+ H     +++E   NKR  +Y    ID
Sbjct:   292 YSIWLDSKMRLTTDPMLIIDFFLWRTKSEFAISNHYDRHCVWDEVLQNKRLNKYNHSAID 351

Query:   181 YQMKIYRYEGM---EPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQ 237
              Q   YR +G+   +P        S VPEG+ I+R HT +SNLF+CLWFNEV+  T RDQ
Sbjct:   352 EQFMFYRSDGLKKFDPSDPNSPLPSYVPEGSFIVRAHTPMSNLFTCLWFNEVDRFTSRDQ 411

Query:   238 LSFGYVVYRLKGL-----FKFYMFPNCEYNSLFVLHPHTREHS 275
             LSF Y   +L+ L      +  MF +CE  +L  L  H  + S
Sbjct:   412 LSFAYTYLKLQRLNSDRPLRLNMFKDCERRALTKLFHHRVDSS 454

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165457 AT5G42660 [Arabidopsis thaliana (taxid:3702)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 108/274 (39%), Positives = 162/274 (59%)

Query:     1 MKVHCGFMR-NGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLM 59
             + +HCGF   NGG  +S  D K++  C+ VV++  F G D  ++P  +S+ S +  C++ 
Sbjct:   187 VSLHCGFFNENGGFRISDKDKKFMTSCEVVVSTCAFGGGDNLYEPIGMSKTSSQKVCYVA 246

Query:    60 VMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQA 119
               DEV+L   ++    K D      +G WR++++K  P+ + R NGK+PK+L HRLFP A
Sbjct:   247 FWDEVTLT-TQEAEGHKIDE--NDHIGKWRIVIVKDLPFTDQRLNGKIPKMLAHRLFPDA 303

Query:   120 QYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLI 179
             +YSIW+D K +   DPL +L+  LWR     AI++H    S+Y+EA+A  ++ +     +
Sbjct:   304 KYSIWVDSKSQFRRDPLGVLDALLWRTNSVLAISEHGARSSVYDEANAVIKKHKATPEEV 363

Query:   180 DYQMKIYRYEGMEPWSIKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLS 239
             + Q+  YR++ + P   + N    + E +VI+REHT L+NLF CLWFNEV   T RDQLS
Sbjct:   364 EVQINQYRHDKL-PEDKRFNGKKALSEASVIVREHTPLTNLFMCLWFNEVVRFTSRDQLS 422

Query:   240 FGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTRE 273
             F YV++RLK L    MFP C    L     H R+
Sbjct:   423 FPYVLWRLKVLKNINMFPVCTRKDLVNSIGHVRK 456

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2162065 AT5G46220 [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 103/303 (33%), Positives = 162/303 (53%)

Query:     1 MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMV 60
             ++V CGF R+    +S  D   ++KC  VVAS IF+ +D   QP  +  ++ +  CF M 
Sbjct:   138 VEVPCGFFRD--FPVSNSDRVEMEKCGLVVASAIFNDHDKIRQPVGLGVKTLETVCFYMF 195

Query:    61 MDEVSLKFI-RKNVTIKEDSAGGQWVGIWRLILLKHPP--YDEPRRNGKVPKILTHRLFP 117
             +D+ +L  +   NV +K + +  + VG WR+I +      Y  P  NG +PK L HRLFP
Sbjct:   196 IDDKTLNSLFHHNVILKNNPSDYR-VGAWRIIKISKSENLYLNPAMNGVIPKYLIHRLFP 254

Query:   118 QAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYAR- 176
              +++SIW+D K++L++DPLL++   L   +   AI++H    +  EEA A  R K++   
Sbjct:   255 NSKFSIWVDAKIQLMIDPLLLIHSMLVVPEVDMAISKHPFFVNTMEEAMATARWKKWGDV 314

Query:   177 PLIDYQMKIYRYEGMEPWSIKKNTV-SDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPR 235
               +  QM+ Y   G++PWS  K    +DVP+ A+I+R H   SNLFSC  FNE+    PR
Sbjct:   315 DGLRIQMETYCEHGLKPWSSSKLPYPTDVPDTALILRRHGIRSNLFSCFMFNELEAFNPR 374

Query:   236 DQLSFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPHTREHSSKIEWVKSRDELKGNGSSMI 295
             DQL+F +V   +    K  MF    +  + V + H  +      + +  +E K      I
Sbjct:   375 DQLAFAFVRDHINPKVKMNMFEVEVFEQVVVEYRHNLKKIESSTYEEQEEEQKQESLRTI 434

Query:   296 EGR 298
             + R
Sbjct:   435 QKR 437


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.140   0.447    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       326   0.00087  116 3  11 22  0.50    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  254 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.75u 0.10s 27.85t   Elapsed:  00:00:01
  Total cpu time:  27.75u 0.10s 27.85t   Elapsed:  00:00:01
  Start:  Tue May 21 01:27:03 2013   End:  Tue May 21 01:27:04 2013

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	326
pfam04765	306	pfam04765, DUF616, Protein of unknown function (DU	1e-165

>gnl|CDD|218253 pfam04765, DUF616, Protein of unknown function (DUF616)

 Score =  461 bits (1187), Expect = e-165
 Identities = 149/272 (54%), Positives = 192/272 (70%), Gaps = 5/272 (1%)

Query: 1   MKVHCGFMR-NGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLM 59
           M VHCGF++ N G ++S  D KY++KC+ VVAS IF  YD   QP  IS+RSKK  CF+M
Sbjct: 38  MTVHCGFVKPNTGFDISESDRKYMEKCRVVVASAIFGDYDKIRQPKGISKRSKKNVCFVM 97

Query: 60  VMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQA 119
            +DE +L  ++    + +D      VG+WR++++K+ PY +PRRNGKVPK L HRLFP A
Sbjct: 98  FVDEETLSTLKSEGHVPDD---NGRVGLWRIVVVKNLPYTDPRRNGKVPKYLLHRLFPNA 154

Query: 120 QYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLI 179
           +YSIW+D K++L+VDPLLILER+LWR    FAI++H     +YEEA+ANKR K+Y    I
Sbjct: 155 RYSIWVDAKLQLVVDPLLILERFLWRTNSDFAISKHYFRHCVYEEAEANKRWKKYGDASI 214

Query: 180 DYQMKIYRYEGMEPWS-IKKNTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQL 238
           D QM+ Y  +G+ PWS  K    SDVPEGAVI+REHT +SNLFSCLWFNEV+  T RDQL
Sbjct: 215 DEQMEFYCSDGLTPWSDPKLPLPSDVPEGAVIVREHTPMSNLFSCLWFNEVDRFTSRDQL 274

Query: 239 SFGYVVYRLKGLFKFYMFPNCEYNSLFVLHPH 270
           SF YV  +L+  FK  MF +CE  SL VL+ H
Sbjct: 275 SFAYVRDKLRPKFKMNMFKDCERRSLVVLYRH 306

Family of uncharacterized proteins. Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
PF04765	305	DUF616: Protein of unknown function (DUF616); Inte	100.0
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	93.85
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	91.43
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	88.44

>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function

Probab=100.00  E-value=4.5e-106  Score=769.71  Aligned_cols=267  Identities=52%  Similarity=0.975  Sum_probs=260.2

Q ss_pred             CceeeeceeCCCCCCChhcHHHhhcCCEEEEEeeecCCCCCCCCCCCCccccccEEEEEEeehhhHHHHhhccccccCCC
Q 020405            1 MKVHCGFMRNGGAEMSPLDVKYVKKCKFVVASGIFDGYDVPHQPSNISRRSKKLFCFLMVMDEVSLKFIRKNVTIKEDSA   80 (326)
Q Consensus         1 ~~~~cgf~~~~g~~i~~~d~~~m~~ckiVVyTaIFG~YD~L~~P~~i~~~~~~~vCF~mF~D~~t~~~l~~~~~~~~d~~   80 (326)
                      |+|||||++++||||||.|+.+|++|+|||||||||+||+|+||+++++.++++|||+||||++|+++|++++.++   +
T Consensus        38 ~~v~Cgf~~~~gf~i~~~d~~~m~~c~vvV~saIFG~yD~l~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~---~  114 (305)
T PF04765_consen   38 MTVHCGFVKNTGFDISESDRRYMEKCRVVVYSAIFGNYDKLRQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIP---D  114 (305)
T ss_pred             ceeccccccCCCCCCCHHHHHHHhcCCEEEEEEecCCCccccCchhhCHHHhcCccEEEEEehhhHHHHHhcCCcc---c
Confidence            7999999999999999999999999999999999999999999999999999999999999999999999998875   3


Q ss_pred             CCceeeceEEEEcCCCCCCCccccCCcceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCC
Q 020405           81 GGQWVGIWRLILLKHPPYDEPRRNGKVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRS  160 (326)
Q Consensus        81 ~~~~vg~WrIv~v~~~~~~d~rrn~k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~c  160 (326)
                      +++++|+||||+|+++||+|+|||||+||+|||+|||||+|||||||||+|++||++||+++||+++++|||++||.|+|
T Consensus       115 ~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~c  194 (305)
T PF04765_consen  115 ENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNC  194 (305)
T ss_pred             cccccCceEEEEecCCCCcchhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCccc
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHHHHHHHHHcCCCCcccCC-CCCCCCCcccEEecccCCchhhhHHHHHHHHhcCCCCCccc
Q 020405          161 IYEEADANKRRKRYARPLIDYQMKIYRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALSNLFSCLWFNEVNLLTPRDQLS  239 (326)
Q Consensus       161 vyeEa~a~~~~~K~~~~~I~~Qm~~Y~~eGlp~~~~~k-~~~s~l~E~~vIiR~H~~~~nlf~clWfnEv~rfs~RDQLS  239 (326)
                      |||||+||++++|++++.|++||++|+++|||+|++.+ |+.+|||||+||+|+|++++|+|||+||||+++||+|||||
T Consensus       195 vyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k~~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLS  274 (305)
T PF04765_consen  195 VYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAKLPLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLS  274 (305)
T ss_pred             HHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCcccccccccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccch
Confidence            99999999999999999999999999999999997666 88899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCcceeccccccccCceeeeecc
Q 020405          240 FGYVVYRLKGLFKFYMFPNCEYNSLFVLHPH  270 (326)
Q Consensus       240 F~Yv~~k~~~~~~~~mf~~~~~~~~f~~~~H  270 (326)
                      |+||+||++.+++++||++|+|++++++++|
T Consensus       275 F~Yv~wk~~~~~~~~mf~~~~~~~~~~~~~h  305 (305)
T PF04765_consen  275 FPYVLWKLGPKFKLNMFKDCERRQLVVLYRH  305 (305)
T ss_pred             HHHHHHHhCCcccchhhhHHHHHHHHHhcCC
Confidence            9999999999999999999999999999998

The function of is unknown although a number of the members are thought to be glycosyltransferases.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=93.85  E-value=0.11  Score=47.70  Aligned_cols=109  Identities=16%  Similarity=0.164  Sum_probs=69.0

Q ss_pred             ceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHHH
Q 020405          108 PKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIYR  187 (326)
Q Consensus       108 pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y~  187 (326)
                      .|++...+||+++--||+|+-+.+.+|+..|.+.-+  ++..+|+..|....  + +...     +             .
T Consensus        85 ~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~--~~~~~aa~~d~~~~--~-~~~~-----~-------------~  141 (248)
T cd04194          85 YRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL--GDNLLAAVRDPFIE--Q-EKKR-----K-------------R  141 (248)
T ss_pred             HHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc--CCCEEEEEecccHH--H-HHHH-----H-------------h
Confidence            388999999999999999999999999999887434  46678887764311  1 0000     0             1


Q ss_pred             HcCCCCcccCCCCCCCCCcccEEecccC-----CchhhhHHHHHHHHh-cCCCCCcccHHHHHHHh
Q 020405          188 YEGMEPWSIKKNTVSDVPEGAVIIREHT-----ALSNLFSCLWFNEVN-LLTPRDQLSFGYVVYRL  247 (326)
Q Consensus       188 ~eGlp~~~~~k~~~s~l~E~~vIiR~H~-----~~~nlf~clWfnEv~-rfs~RDQLSF~Yv~~k~  247 (326)
                      ..+.++       ..+.+-+||++=+-.     ...+.++ .|..+.. ++.-.||-.++.+.+..
T Consensus       142 ~~~~~~-------~~~yfNsGv~l~nl~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~~~~~  199 (248)
T cd04194         142 RLGGYD-------DGSYFNSGVLLINLKKWREENITEKLL-ELIKEYGGRLIYPDQDILNAVLKDK  199 (248)
T ss_pred             hcCCCc-------ccceeeecchheeHHHHHHhhhHHHHH-HHHHhCCCceeeCChHHHHHHHhCC
Confidence            222322       234577888874322     1222222 3333332 36679999999998864

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=91.43  E-value=0.95  Score=41.79  Aligned_cols=160  Identities=14%  Similarity=0.146  Sum_probs=94.8

Q ss_pred             cEEEEEEeehhhHHHHhhccccccCCCCCceeeceEEEEcCCCCCC------CccccCCcceeeccCCCCCCCEEEEEec
Q 020405           54 LFCFLMVMDEVSLKFIRKNVTIKEDSAGGQWVGIWRLILLKHPPYD------EPRRNGKVPKILTHRLFPQAQYSIWIDG  127 (326)
Q Consensus        54 ~vCF~mF~D~~t~~~l~~~~~~~~d~~~~~~vg~WrIv~v~~~~~~------d~rrn~k~pKll~HrlFp~y~ySIWID~  127 (326)
                      .+.|+.++|+.+.+..+.-..+. ..    .-..-+++.++...+.      ......-+.|++..++||+++--||+|+
T Consensus        30 ~~~~~il~~~is~~~~~~L~~~~-~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~  104 (246)
T cd00505          30 PLRFHVLTNPLSDTFKAALDNLR-KL----YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDA  104 (246)
T ss_pred             CeEEEEEEccccHHHHHHHHHHH-hc----cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcC
Confidence            57788888886664433211111 00    0123455555422211      2233344779999999999999999999


Q ss_pred             ceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHH-HHcCCCCcccCCCCCCCCCc
Q 020405          128 KMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY-RYEGMEPWSIKKNTVSDVPE  206 (326)
Q Consensus       128 ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y-~~eGlp~~~~~k~~~s~l~E  206 (326)
                      -+.+..|+..|.+--+  ++..+|+..-..-  .+        ..           +.| +..|++.       ....+-
T Consensus       105 D~iv~~di~~L~~~~l--~~~~~aav~d~~~--~~--------~~-----------~~~~~~~~~~~-------~~~yfN  154 (246)
T cd00505         105 DILVLTDIDELWDTPL--GGQELAAAPDPGD--RR--------EG-----------KYYRQKRSHLA-------GPDYFN  154 (246)
T ss_pred             CeeeccCHHHHhhccC--CCCeEEEccCchh--hh--------cc-----------chhhcccCCCC-------CCCcee
Confidence            9999999999998655  5667887753210  00        00           111 1233432       223467


Q ss_pred             ccEEecccCCc-----hhhhHHHHHHHHhcCCCCCcccHHHHHHHhc
Q 020405          207 GAVIIREHTAL-----SNLFSCLWFNEVNLLTPRDQLSFGYVVYRLK  248 (326)
Q Consensus       207 ~~vIiR~H~~~-----~nlf~clWfnEv~rfs~RDQLSF~Yv~~k~~  248 (326)
                      +||++=+-...     .......|.+...+..--||=.++.++...+
T Consensus       155 sGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~  201 (246)
T cd00505         155 SGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVP  201 (246)
T ss_pred             eeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCC
Confidence            88888444332     1222244555556788899999999988764

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=88.44  E-value=0.6  Score=41.50  Aligned_cols=112  Identities=13%  Similarity=0.139  Sum_probs=63.4

Q ss_pred             CcceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHH
Q 020405          106 KVPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKI  185 (326)
Q Consensus       106 k~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~  185 (326)
                      -+.|++.+.+||+|+--||+|+-+.+.+|+..|.+.-+  ++..+|+...                         .....
T Consensus        86 ~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~~  138 (250)
T PF01501_consen   86 TFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFDN  138 (250)
T ss_dssp             GGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------HH
T ss_pred             HHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhhh
Confidence            34689999999999999999999999999999988555  3566777666                         11111


Q ss_pred             HHHcCCCCcccCC-CCCCCCCcccEEecccCCch-hhhHHHHHHHHhc----CCCCCcccHHHHHH
Q 020405          186 YRYEGMEPWSIKK-NTVSDVPEGAVIIREHTALS-NLFSCLWFNEVNL----LTPRDQLSFGYVVY  245 (326)
Q Consensus       186 Y~~eGlp~~~~~k-~~~s~l~E~~vIiR~H~~~~-nlf~clWfnEv~r----fs~RDQLSF~Yv~~  245 (326)
                      +- .+-...+... +...+.+-+||++=+-.... ..+...+-+.++.    ..-.||=.|++++.
T Consensus       139 ~~-~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~  203 (250)
T PF01501_consen  139 FP-NKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY  203 (250)
T ss_dssp             HH-TSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT
T ss_pred             hh-hcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc
Confidence            11 1111111111 22456788888884433221 1222222222222    34589999999987

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	326
3tzt_A	276	Glycosyl transferase family 8; structural genomics	83.36

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=83.36  E-value=0.69  Score=42.44  Aligned_cols=48  Identities=19%  Similarity=0.247  Sum_probs=39.3

Q ss_pred             cceeeccCCCC-CCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCC
Q 020405          107 VPKILTHRLFP-QAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHK  156 (326)
Q Consensus       107 ~pKll~HrlFp-~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp  156 (326)
                      +.|++...+|| +++--||+|+-+.+.+|+.+|.+.-+  ++..+|+..+.
T Consensus        88 ~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl--~~~~~aav~d~  136 (276)
T 3tzt_A           88 YYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDI--SDYILAAASHT  136 (276)
T ss_dssp             HHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCC--TTSSEEEEEC-
T ss_pred             HHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCC--CCCeEEEEEec
Confidence            56888889999 69999999999999999999887433  45678888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	326
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	85.4

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=85.40  E-value=0.33  Score=41.53  Aligned_cols=108  Identities=10%  Similarity=0.093  Sum_probs=70.4

Q ss_pred             cceeeccCCCCCCCEEEEEecceEEeeCHHHHHHHHHhcCCCeEEEecCCCCCCHHHHHHHHHHhccCChhHHHHHHHHH
Q 020405          107 VPKILTHRLFPQAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRSIYEEADANKRRKRYARPLIDYQMKIY  186 (326)
Q Consensus       107 ~pKll~HrlFp~y~ySIWID~ki~L~~Dp~~lle~~l~r~~~~~Ai~~Hp~R~cvyeEa~a~~~~~K~~~~~I~~Qm~~Y  186 (326)
                      +.|++.+.+||+++-.||+|+=+.+..|+..|.+.-+  ++..+|+..+...                     ..+-...
T Consensus        84 y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~--~~~~~aa~~d~~~---------------------~~~~~~~  140 (282)
T d1ga8a_          84 YARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDL--GDNWLGASIDLFV---------------------ERQEGYK  140 (282)
T ss_dssp             GGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCC--TTCSEEEEECHHH---------------------HTSTTHH
T ss_pred             HHHHHHhhhCCccceEEEecCCEEEecchHHHHhccc--ccceeeeehhhhh---------------------hhhhhhH
Confidence            3577888889999999999999999999998887433  4566777654211                     0111223


Q ss_pred             HHcCCCCcccCCCCCCCCCcccEEecccC-----CchhhhHHHHHHHHh-cCCCCCcccHHHHHH
Q 020405          187 RYEGMEPWSIKKNTVSDVPEGAVIIREHT-----ALSNLFSCLWFNEVN-LLTPRDQLSFGYVVY  245 (326)
Q Consensus       187 ~~eGlp~~~~~k~~~s~l~E~~vIiR~H~-----~~~nlf~clWfnEv~-rfs~RDQLSF~Yv~~  245 (326)
                      ...|+++       ....+-+||++-...     .....++ .|.++.. .+.--||=.++.++.
T Consensus       141 ~~~~~~~-------~~~yfNsGVml~n~~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~f~  197 (282)
T d1ga8a_         141 QKIGMAD-------GEYYFNAGVLLINLKKWRRHDIFKMSS-EWVEQYKDVMQYQDQDILNGLFK  197 (282)
T ss_dssp             HHTTCCT-------TSCCEEEEEEEECHHHHTTSCHHHHHH-HHHHHHTTTCSSTHHHHHHHHHT
T ss_pred             HHhCCCC-------CCceeecceeeechhhhhhhhHHHHHH-HHHHhcccCcccCchhHHHHHhc
Confidence            4456654       345578889876433     2334443 4455543 345589999997764