Citrus Sinensis ID: 020412

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRAVDVLLES
cHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccHHHHccccccHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccc
ccEEEEEEEEEEccccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHcccccccccEEEccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccEcccEccEccccccHEcccc
MSFWILFFLLLITMAtadplrpgyysetcpeaeSIVGDVIMKAMireprsgasvMRFQFHdcfvngcdasmllddtptmlgeklslsninslrsYEVIDEVKEALEKacpgtvscaDIIIMASRDAvalsggpswevklgrkdsltasqkdaddimpspranASFLVDLFAKFDLSIKDLVALsgshsigqgrCFSIMFRLynqsgsgkpdpaiepkFREKLNrlcpiggdgnvtvdldatpqafdnQYFKDLaagrgflnsdetlytypwtrpyvklYSKDQDKFFKAFVEGMIKlgdlqsgkpgeirtncrvvNSRAVDVLLES
MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAagrgflnsdetlytypWTRPYVKLYSKDQDKFFKAFVEGMIKlgdlqsgkpgeirtncrvvnsravdvlles
MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRAVDVLLES
**FWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEV*************************ASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYN****************EKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRAVDV****
MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNR**P*****NVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRA*******
MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRAVDVLLES
MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLS*SNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRAV******
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRVVNSRAVDVLLES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
Q9SJZ2329 Peroxidase 17 OS=Arabidop yes no 1.0 0.990 0.769 1e-152
Q42517327 Peroxidase N OS=Armoracia N/A no 0.941 0.938 0.468 2e-79
P59121306 Peroxidase E5 OS=Armoraci N/A no 0.917 0.977 0.485 2e-79
Q39034328 Peroxidase 59 OS=Arabidop no no 0.953 0.948 0.446 4e-79
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.966 0.931 0.456 9e-79
O23237331 Peroxidase 49 OS=Arabidop no no 0.947 0.933 0.466 3e-78
P24102349 Peroxidase 22 OS=Arabidop no no 0.963 0.899 0.471 8e-78
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.993 0.905 0.421 1e-77
O80912349 Peroxidase 23 OS=Arabidop no no 0.975 0.911 0.462 4e-77
P17180349 Peroxidase C3 OS=Armoraci N/A no 0.975 0.911 0.462 8e-77
>sp|Q9SJZ2|PER17_ARATH Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1 Back     alignment and function desciption
 Score =  539 bits (1388), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 251/326 (76%), Positives = 291/326 (89%)

Query: 1   MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFH 60
           +   IL+  LL  + T + LRP +YSETCPEAESIV   + KAMI+E RS ASVMRFQFH
Sbjct: 4   LPHLILYLTLLTVVVTGETLRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFH 63

Query: 61  DCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIII 120
           DCFVNGCDAS+LLDDTP MLGEKLSLSNI+SLRS+EV+D++KEALEKACP TVSCADI+I
Sbjct: 64  DCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVI 123

Query: 121 MASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDL 180
           MA+RDAVAL+GGP WEVKLGRKDSLTASQ+D+DDIMPSPRANA+FL+DLF +F+LS+KD+
Sbjct: 124 MAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDM 183

Query: 181 VALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDA 240
           VALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPA+EP +R+KL++LCP+GGD NVT DLDA
Sbjct: 184 VALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLDA 243

Query: 241 TPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDL 300
           TPQ FDNQYFKDL +GRGFLNSD+TLYT   TR YVK++S+DQD+FF+AF EGM+KLGDL
Sbjct: 244 TPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDL 303

Query: 301 QSGKPGEIRTNCRVVNSRAVDVLLES 326
           QSG+PGEIR NCRVVN R +DVLL S
Sbjct: 304 QSGRPGEIRFNCRVVNRRPIDVLLVS 329
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q42517|PERN_ARMRU Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1 Back     alignment and function description
>sp|P59121|PERE5_ARMRU Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1 Back     alignment and function description
>sp|Q39034|PER59_ARATH Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|P24102|PER22_ARATH Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description
>sp|O80912|PER23_ARATH Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1 Back     alignment and function description
>sp|P17180|PER3_ARMRU Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
225468186326 PREDICTED: peroxidase 17 [Vitis vinifera 1.0 1.0 0.785 1e-153
224083590330 predicted protein [Populus trichocarpa] 0.978 0.966 0.792 1e-151
15227200329 peroxidase [Arabidopsis thaliana] gi|254 1.0 0.990 0.769 1e-151
297821465329 peroxidase 17 [Arabidopsis lyrata subsp. 1.0 0.990 0.760 1e-148
224096149330 predicted protein [Populus trichocarpa] 1.0 0.987 0.766 1e-148
297741824361 unnamed protein product [Vitis vinifera] 0.978 0.883 0.783 1e-148
357470223415 Peroxidase [Medicago truncatula] gi|3574 0.960 0.754 0.751 1e-142
356544218339 PREDICTED: peroxidase 17-like [Glycine m 0.966 0.929 0.736 1e-142
255646365339 unknown [Glycine max] 0.966 0.929 0.736 1e-141
388504034342 unknown [Lotus japonicus] 0.960 0.915 0.747 1e-141
>gi|225468186|ref|XP_002271083.1| PREDICTED: peroxidase 17 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/326 (78%), Positives = 293/326 (89%)

Query: 1   MSFWILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFH 60
           MS  +L  +L I  ATA  LRPG+YSE+CPEAE IV +V+ KAMI+EPRSGASVMR QFH
Sbjct: 1   MSLLVLLCILNIATATAAHLRPGFYSESCPEAELIVREVMKKAMIKEPRSGASVMRLQFH 60

Query: 61  DCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIII 120
           DCFVNGCDAS+LLDDTP MLGEKL+LSNINSLRS+EVID+VKEALEK+CP TVSCADIII
Sbjct: 61  DCFVNGCDASLLLDDTPNMLGEKLALSNINSLRSFEVIDQVKEALEKSCPETVSCADIII 120

Query: 121 MASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDL 180
           MASRDAVALSGGP WEVKLGRKDSLTASQ+D+++IMPSPR+NASFLVDLF +F+LS+KDL
Sbjct: 121 MASRDAVALSGGPDWEVKLGRKDSLTASQEDSNNIMPSPRSNASFLVDLFNQFNLSVKDL 180

Query: 181 VALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDA 240
           VALSGSHSIGQGRCFSIMFRLYNQSG+G+PDPAIEPK+R +LN+LCP+  D NVT DLDA
Sbjct: 181 VALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPKYRNRLNKLCPLNVDQNVTGDLDA 240

Query: 241 TPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDL 300
           TP+ FDNQYFKDL +GRGFLNSDETL+TYP TR +V++YS DQ KFFK F + MIK+GDL
Sbjct: 241 TPEIFDNQYFKDLVSGRGFLNSDETLFTYPRTRKFVQVYSNDQIKFFKDFAKAMIKMGDL 300

Query: 301 QSGKPGEIRTNCRVVNSRAVDVLLES 326
           QSG+PGEIR NCR+VNSR+VD LLES
Sbjct: 301 QSGRPGEIRRNCRMVNSRSVDTLLES 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224083590|ref|XP_002307070.1| predicted protein [Populus trichocarpa] gi|222856519|gb|EEE94066.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15227200|ref|NP_179828.1| peroxidase [Arabidopsis thaliana] gi|25453217|sp|Q9SJZ2.1|PER17_ARATH RecName: Full=Peroxidase 17; Short=Atperox P17; AltName: Full=ATP25a; Flags: Precursor gi|4544449|gb|AAD22357.1| putative peroxidase [Arabidopsis thaliana] gi|28393257|gb|AAO42057.1| putative peroxidase [Arabidopsis thaliana] gi|28827478|gb|AAO50583.1| putative peroxidase [Arabidopsis thaliana] gi|330252207|gb|AEC07301.1| peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297821465|ref|XP_002878615.1| peroxidase 17 [Arabidopsis lyrata subsp. lyrata] gi|297324454|gb|EFH54874.1| peroxidase 17 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224096149|ref|XP_002310551.1| predicted protein [Populus trichocarpa] gi|222853454|gb|EEE91001.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297741824|emb|CBI33137.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357470223|ref|XP_003605396.1| Peroxidase [Medicago truncatula] gi|357470255|ref|XP_003605412.1| Peroxidase [Medicago truncatula] gi|355506451|gb|AES87593.1| Peroxidase [Medicago truncatula] gi|355506467|gb|AES87609.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356544218|ref|XP_003540551.1| PREDICTED: peroxidase 17-like [Glycine max] Back     alignment and taxonomy information
>gi|255646365|gb|ACU23662.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388504034|gb|AFK40083.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
TAIR|locus:2041188329 AT2G22420 [Arabidopsis thalian 0.987 0.978 0.779 1.7e-137
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.911 0.878 0.481 9.6e-73
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.944 0.930 0.474 1.2e-72
TAIR|locus:2057180349 AT2G38380 [Arabidopsis thalian 0.963 0.899 0.471 3.2e-72
TAIR|locus:2147645328 AT5G19890 [Arabidopsis thalian 0.944 0.939 0.451 3.2e-72
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.907 0.855 0.478 4.8e-71
TAIR|locus:2138273346 Prx37 "peroxidase 37" [Arabido 0.972 0.916 0.452 4.8e-71
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.975 0.911 0.462 7.7e-71
TAIR|locus:2138278346 AT4G08780 [Arabidopsis thalian 0.972 0.916 0.443 2.6e-70
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.911 0.881 0.478 3.3e-70
TAIR|locus:2041188 AT2G22420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
 Identities = 251/322 (77%), Positives = 290/322 (90%)

Query:     5 ILFFLLLITMATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFV 64
             IL+  LL  + T + LRP +YSETCPEAESIV   + KAMI+E RS ASVMRFQFHDCFV
Sbjct:     8 ILYLTLLTVVVTGETLRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFV 67

Query:    65 NGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASR 124
             NGCDAS+LLDDTP MLGEKLSLSNI+SLRS+EV+D++KEALEKACP TVSCADI+IMA+R
Sbjct:    68 NGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAAR 127

Query:   125 DAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALS 184
             DAVAL+GGP WEVKLGRKDSLTASQ+D+DDIMPSPRANA+FL+DLF +F+LS+KD+VALS
Sbjct:   128 DAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALS 187

Query:   185 GSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLDATPQA 244
             GSHSIGQGRCFSIMFRLYNQSGSGKPDPA+EP +R+KL++LCP+GGD NVT DLDATPQ 
Sbjct:   188 GSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLDATPQV 247

Query:   245 FDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGK 304
             FDNQYFKDL +GRGFLNSD+TLYT   TR YVK++S+DQD+FF+AF EGM+KLGDLQSG+
Sbjct:   248 FDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQSGR 307

Query:   305 PGEIRTNCRVVNSRAVDVLLES 326
             PGEIR NCRVVN R +DVLL S
Sbjct:   308 PGEIRFNCRVVNRRPIDVLLVS 329
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
GO:0009855 "determination of bilateral symmetry" evidence=RCA
GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA
GO:0010014 "meristem initiation" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057180 AT2G38380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147645 AT5G19890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138273 Prx37 "peroxidase 37" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138278 AT4G08780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SJZ2PER17_ARATH1, ., 1, 1, ., 1, ., 70.76991.00.9908yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-157
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 6e-79
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-59
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 5e-26
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-23
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 5e-20
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 7e-15
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-14
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-07
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 6e-04
pfam00141180 pfam00141, peroxidase, Peroxidase 0.002
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  440 bits (1134), Expect = e-157
 Identities = 153/299 (51%), Positives = 204/299 (68%), Gaps = 5/299 (1%)

Query: 20  LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTM 79
           L  G+YS++CP AESIV  V+  A+  +PR  A+++R  FHDCFV GCDAS+LLD T   
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 80  LGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKL 139
             EK +  N+ SLR ++VID++K ALE ACPG VSCADI+ +A+RDAV L+GGPS+EV L
Sbjct: 62  TSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 140 GRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMF 199
           GR+D   +S  D  ++ PSP  + S L+ LFA   L++ DLVALSG+H+IG+  C S   
Sbjct: 121 GRRDGRVSSANDVGNL-PSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSD 179

Query: 200 RLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLD-ATPQAFDNQYFKDLAAGRG 258
           RLYN SG+G PDP ++P +  +L + CP GGD +  V LD  TP  FDN Y+K+L AGRG
Sbjct: 180 RLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRG 239

Query: 259 FLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQ--SGKPGEIRTNCRVV 315
            L SD+ L + P TR  V  Y+ +QD FF+ F   M+K+G++   +G  GEIR NCRVV
Sbjct: 240 LLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.55
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.4e-103  Score=744.65  Aligned_cols=308  Identities=41%  Similarity=0.753  Sum_probs=287.7

Q ss_pred             HHHHHHHHHH---HhhCCCCCccccccCCccHHHHHHHHHHHHHHhCCCchhhhhHhhhcccCCCCCCceeecCCCCCCc
Q 020412            4 WILFFLLLIT---MATADPLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTML   80 (326)
Q Consensus         4 ~~~~~~~~~~---~~~~~~l~~~fy~~sCP~~e~~V~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~   80 (326)
                      .|||+||++.   .+.+++|+++||+++||++|+||++.|++.+.++++++|++|||+||||||+||||||||+++   .
T Consensus         6 ~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~   82 (324)
T PLN03030          6 VILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---N   82 (324)
T ss_pred             hHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---c
Confidence            4666666655   334577999999999999999999999999999999999999999999999999999999864   4


Q ss_pred             ccccCcCccCCcchHHHHHHHHHHHHhhCCCCcchhhHHHHhhhhhhhhcCCCccccccCCCCCCCccccCCCCCCCCCC
Q 020412           81 GEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPR  160 (326)
Q Consensus        81 ~E~~~~~N~~~l~g~~~i~~iK~~le~~cp~~VS~ADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~  160 (326)
                      .||++++|. +|+||++|+.||++||++||++|||||||++|||+||+++|||.|+|++||||+.+|...++. +||.|+
T Consensus        83 ~Ek~a~~N~-~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~  160 (324)
T PLN03030         83 TEKTALPNL-LLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFT  160 (324)
T ss_pred             ccccCCCCc-CcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCC
Confidence            799999999 999999999999999999999999999999999999999999999999999999998777664 899999


Q ss_pred             CCHHHHHHHHHhCCCCcccchhcccccccccccccccccccccCCCCC-CCCCCCcHHHHHHhcccCCCCCCCCccccCC
Q 020412          161 ANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMFRLYNQSGSG-KPDPAIEPKFREKLNRLCPIGGDGNVTVDLD  239 (326)
Q Consensus       161 ~~~~~l~~~F~~~G~~~~e~VaLsGaHtiG~~hc~~f~~rl~nf~g~~-~~dp~~~~~~~~~L~~~C~~~~~~~~~~~~D  239 (326)
                      .+++++++.|+++||+.+|||+||||||||++||.+|.+|||||.|++ .+||+||+.|+..|++.||..++++..+++|
T Consensus       161 ~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD  240 (324)
T PLN03030        161 DSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALD  240 (324)
T ss_pred             CCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCC
Confidence            999999999999999999999999999999999999999999999875 4799999999999999999643333467899


Q ss_pred             -CCCCCCChHHHHHhhcCCcccccccccccCCCchHHHHhhccCH----HHHHHHHHHHHHHhhcCC--CCCCCcccccc
Q 020412          240 -ATPQAFDNQYFKDLAAGRGFLNSDETLYTYPWTRPYVKLYSKDQ----DKFFKAFVEGMIKLGDLQ--SGKPGEIRTNC  312 (326)
Q Consensus       240 -~tp~~FDN~Yyknl~~~~g~L~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~A~~Km~~lg--TG~~GeiR~~C  312 (326)
                       .||.+|||+||+||+.++|+|.|||+|+.|++|+++|++||.|+    ++|+++|++||+||++||  ||++||||++|
T Consensus       241 ~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C  320 (324)
T PLN03030        241 TGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVC  320 (324)
T ss_pred             CCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccc
Confidence             99999999999999999999999999999999999999999875    599999999999999999  99999999999


Q ss_pred             cccC
Q 020412          313 RVVN  316 (326)
Q Consensus       313 ~~vN  316 (326)
                      +++|
T Consensus       321 ~~vN  324 (324)
T PLN03030        321 SAIN  324 (324)
T ss_pred             cccC
Confidence            9998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 6e-80
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-76
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 1e-73
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 4e-73
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 4e-73
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-73
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 8e-73
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 9e-73
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 1e-72
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 1e-72
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 1e-72
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-72
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 5e-72
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 8e-72
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 5e-71
1sch_A294 Peanut Peroxidase Length = 294 7e-70
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 4e-68
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 3e-58
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 9e-56
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 4e-15
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-10
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 3e-10
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 4e-10
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 4e-10
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 4e-10
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 5e-10
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 5e-10
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 5e-10
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 5e-10
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 5e-10
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 5e-10
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 5e-10
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 3e-09
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-09
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-09
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 5e-07
1bem_A291 Interaction Between Proximal And Distals Regions Of 6e-07
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 7e-07
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 7e-07
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 8e-07
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 8e-07
1bej_A291 Interaction Between Proximal And Distals Regions Of 9e-07
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 1e-06
1beq_A291 Interaction Between Proximal And Distals Regions Of 1e-06
3m23_A291 Crystallographic And Single Crystal Spectral Analys 1e-06
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 1e-06
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 1e-06
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 1e-06
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 1e-06
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 1e-06
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 1e-06
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 1e-06
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 1e-06
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 1e-06
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 1e-06
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 1e-06
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 2e-06
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 2e-06
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 2e-06
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 2e-06
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 2e-06
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 2e-06
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 2e-06
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 2e-06
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 2e-06
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 2e-06
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 2e-06
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 2e-06
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 2e-06
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 2e-06
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 2e-06
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 2e-06
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 2e-06
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 2e-06
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 2e-06
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 2e-06
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 2e-06
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 2e-06
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 3e-06
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 3e-06
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 3e-06
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 3e-06
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 3e-06
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 3e-06
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 3e-06
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 4e-06
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 4e-06
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 4e-06
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 4e-06
1cyf_A296 Identifying The Physiological Electron Transfer Sit 5e-06
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 8e-06
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 9e-06
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-05
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 3e-05
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 3e-05
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 3e-05
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure 
Iteration: 1

 Score =  293 bits (751), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 141/303 (46%), Positives = 198/303 (65%), Gaps = 9/303 (2%)
Query: 20  LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTM 79
           L P  Y+++CP    IV   +  A+  E R  AS++R  FHDCFVNGCDAS+LLD   + 
Sbjct: 2   LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS- 60
Query: 80  LGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKL 139
             EKL++ NINS R +EVID +K A+E ACPG VSCADI+ +A+RD+V LSGGP W V L
Sbjct: 61  --EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVAL 118
Query: 140 GRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMF 199
           GRKD L A+Q  A++ +PSP      ++  F   +L+I D+VALSG+H+ GQ +C     
Sbjct: 119 GRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSN 177
Query: 200 RLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLD-ATPQAFDNQYFKDLAAGRG 258
           RL+N +G+G PD  +E      L  +CP+GG+ N+T  LD +T   FDN YFK+L  G+G
Sbjct: 178 RLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKG 237
Query: 259 FLNSDETLYT----YPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQSGKPGEIRTNCRV 314
            L+SD+ L++       T+  V+ YS+ Q  FF+ F   MI++G++ +G  GE+RTNCRV
Sbjct: 238 LLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNISNGASGEVRTNCRV 297
Query: 315 VNS 317
           +N+
Sbjct: 298 INN 300
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-167
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-167
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-166
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-165
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-165
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-162
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-156
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 2e-87
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 9e-68
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 8e-66
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 6e-64
2e39_A344 Peroxidase; heme protein, coordination geometry of 6e-60
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 3e-59
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 1e-56
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-23
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-19
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
 Score =  466 bits (1202), Expect = e-167
 Identities = 138/303 (45%), Positives = 193/303 (63%), Gaps = 5/303 (1%)

Query: 20  LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTM 79
           L   +YS TCP A +IV   I +A+  + R GAS++R  FHDCFVNGCDAS+LLDDT ++
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 80  LGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKL 139
             EK +  N+NS R + V+D +K ALE ACPG VSC+D++ +AS  +V+L+GGPSW V L
Sbjct: 63  QSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLL 122

Query: 140 GRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMF 199
           GR+DSLTA+   A+  +PSP  + S +   F+   L+  DLVALSG+H+ G+ RC     
Sbjct: 123 GRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNN 182

Query: 200 RLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLD-ATPQAFDNQYFKDLAAGRG 258
           RL+N SG+G PDP +       L +LCP  G  +   +LD +TP AFDN YF +L +  G
Sbjct: 183 RLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDG 242

Query: 259 FLNSDETLY--TYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQ--SGKPGEIRTNCRV 314
            L SD+ L+  T   T   V  ++ +Q  FF+AF + MI +G++   +G  GEIR +C+ 
Sbjct: 243 LLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKK 302

Query: 315 VNS 317
           VN 
Sbjct: 303 VNG 305
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.6e-105  Score=760.18  Aligned_cols=298  Identities=40%  Similarity=0.700  Sum_probs=288.8

Q ss_pred             CCccccccCCccHHHHHHHHHHHHHHhCCCchhhhhHhhhcccCCCCCCceeecCCCCCCcccccCcCccCCcchHHHHH
Q 020412           20 LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVID   99 (326)
Q Consensus        20 l~~~fy~~sCP~~e~~V~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~l~g~~~i~   99 (326)
                      |+++||+++||++|+|||+.|++++.++++++|++|||+||||||+||||||||++++++.+|+++++|.++|+||++|+
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999888889999999987799999999


Q ss_pred             HHHHHHHhhCCCCcchhhHHHHhhhhhhhhcCCCccccccCCCCCCCccccCCCCCCCCCCCCHHHHHHHHHhCCCCccc
Q 020412          100 EVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKD  179 (326)
Q Consensus       100 ~iK~~le~~cp~~VS~ADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~e  179 (326)
                      .||++||++||++|||||||+||||+||+++|||.|+|++||||+.++...+++.+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999987777778999999999999999999999999


Q ss_pred             chhcccccccccccccccccccccCCCCCCCCCCCcHHHHHHhcccCCCCCC--CCccccCC-CCCCCCChHHHHHhhcC
Q 020412          180 LVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGD--GNVTVDLD-ATPQAFDNQYFKDLAAG  256 (326)
Q Consensus       180 ~VaLsGaHtiG~~hc~~f~~rl~nf~g~~~~dp~~~~~~~~~L~~~C~~~~~--~~~~~~~D-~tp~~FDN~Yyknl~~~  256 (326)
                      |||||||||||++||.+|.+|||||+|++.+||++|+.|+..|++.||..++  +++.+++| .||.+|||+||+||+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            9999999999999999999999999998889999999999999999998665  66788999 99999999999999999


Q ss_pred             CcccccccccccCCCchHHHHhhccCHHHHHHHHHHHHHHhhcCC--CCCCCcccccccccCC
Q 020412          257 RGFLNSDETLYTYPWTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQ--SGKPGEIRTNCRVVNS  317 (326)
Q Consensus       257 ~g~L~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lg--TG~~GeiR~~C~~vN~  317 (326)
                      +|+|+|||+|+.|++|+.+|++||.|+++|+++|++||+||++||  ||++||||++|++||+
T Consensus       242 ~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             CCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             cCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            999999999999999999999999999999999999999999999  9999999999999994
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 326
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-119
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-117
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-117
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-108
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-107
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-104
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-63
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 6e-62
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 5e-60
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-39
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 2e-39
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 4e-37
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 1e-07
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 1e-05
d1ub2a1406 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Syne 1e-04
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 0.002
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  344 bits (883), Expect = e-119
 Identities = 136/302 (45%), Positives = 187/302 (61%), Gaps = 5/302 (1%)

Query: 20  LRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTM 79
           L P +Y ETCP    IV  VI  A   +PR GAS+MR  FHDCFV GCD S+LL++T T+
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 80  LGEKLSLSNINSLRSYEVIDEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKL 139
             E+ +L NINS+R  +V++++K A+E +CP TVSCADI+ +A+  A  L GGP W V L
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 140 GRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIKDLVALSGSHSIGQGRCFSIMF 199
           GR+DSLTA++  A+  +P+P  N + L   FA   L+  DLV LSG H+ G+ RC + + 
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 200 RLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLD-ATPQAFDNQYFKDLAAGRG 258
           RLYN S +G PDP +   + E L   CP    G+   +LD +TP  FDN+Y+ +L    G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 259 FLNSDETLYTYPW--TRPYVKLYSKDQDKFFKAFVEGMIKLGDLQ--SGKPGEIRTNCRV 314
            L SD+ L++ P   T P V  +S +Q+ FF  F   MIK+G++   +G  GEIR  C  
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301

Query: 315 VN 316
           VN
Sbjct: 302 VN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=5.1e-100  Score=722.73  Aligned_cols=299  Identities=45%  Similarity=0.818  Sum_probs=289.0

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHHhCCCchhhhhHhhhcccCCCCCCceeecCCCCCCcccccCcCccCCcchHHHH
Q 020412           19 PLRPGYYSETCPEAESIVGDVIMKAMIREPRSGASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLSNINSLRSYEVI   98 (326)
Q Consensus        19 ~l~~~fy~~sCP~~e~~V~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~l~g~~~i   98 (326)
                      ||+.+||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||+++.++.+|+++++|.+.++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999988888999999999456899999


Q ss_pred             HHHHHHHHhhCCCCcchhhHHHHhhhhhhhhcCCCccccccCCCCCCCccccCCCCCCCCCCCCHHHHHHHHHhCCCCcc
Q 020412           99 DEVKEALEKACPGTVSCADIIIMASRDAVALSGGPSWEVKLGRKDSLTASQKDADDIMPSPRANASFLVDLFAKFDLSIK  178 (326)
Q Consensus        99 ~~iK~~le~~cp~~VS~ADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~  178 (326)
                      +.||++||+.||++|||||||+||||+||+.+|||.|+|++||+|+.+++..++..+||.|+.+++++++.|++|||+.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999998777777899999999999999999999999


Q ss_pred             cchhcccccccccccccccccccccCCCCCCCCCCCcHHHHHHhcccCCCCCCCCccccCC-CCCCCCChHHHHHhhcCC
Q 020412          179 DLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIEPKFREKLNRLCPIGGDGNVTVDLD-ATPQAFDNQYFKDLAAGR  257 (326)
Q Consensus       179 e~VaLsGaHtiG~~hc~~f~~rl~nf~g~~~~dp~~~~~~~~~L~~~C~~~~~~~~~~~~D-~tp~~FDN~Yyknl~~~~  257 (326)
                      |||||+||||||++||.+|..|+|+|.+++.+||++++.|+..|+..||..+.+.+.+++| .||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            9999999999999999999999999999988999999999999999999877677788888 999999999999999999


Q ss_pred             cccccccccccCC--CchHHHHhhccCHHHHHHHHHHHHHHhhcCC--CCCCCcccccccccCC
Q 020412          258 GFLNSDETLYTYP--WTRPYVKLYSKDQDKFFKAFVEGMIKLGDLQ--SGKPGEIRTNCRVVNS  317 (326)
Q Consensus       258 g~L~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~A~~Km~~lg--TG~~GeiR~~C~~vN~  317 (326)
                      |+|+||++|+.||  +|+++|++||.|+++|+++|++||+||++||  ||.+||||++|+++|.
T Consensus       241 glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             CSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             cccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            9999999999996  7999999999999999999999999999999  9999999999999994
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure