Citrus Sinensis ID: 020492
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 325 | 2.2.26 [Sep-21-2011] | |||||||
| Q9F234 | 787 | Alpha-glucosidase 2 OS=Ba | N/A | no | 0.932 | 0.385 | 0.514 | 2e-90 | |
| Q8TET4 | 914 | Neutral alpha-glucosidase | yes | no | 0.926 | 0.329 | 0.434 | 1e-68 | |
| Q9BE70 | 769 | Neutral alpha-glucosidase | N/A | no | 0.926 | 0.391 | 0.427 | 9e-68 | |
| Q8BVW0 | 898 | Neutral alpha-glucosidase | yes | no | 0.926 | 0.335 | 0.430 | 7e-67 | |
| P79403 | 944 | Neutral alpha-glucosidase | no | no | 0.910 | 0.313 | 0.411 | 4e-65 | |
| Q4R4N7 | 944 | Neutral alpha-glucosidase | N/A | no | 0.901 | 0.310 | 0.414 | 4e-65 | |
| Q14697 | 944 | Neutral alpha-glucosidase | no | no | 0.901 | 0.310 | 0.411 | 5e-65 | |
| Q94502 | 943 | Neutral alpha-glucosidase | yes | no | 0.913 | 0.314 | 0.401 | 6e-64 | |
| Q8BHN3 | 944 | Neutral alpha-glucosidase | no | no | 0.916 | 0.315 | 0.398 | 6e-64 | |
| Q9US55 | 923 | Glucosidase 2 subunit alp | yes | no | 0.923 | 0.325 | 0.403 | 2e-59 |
| >sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 332 bits (851), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 202/307 (65%), Gaps = 4/307 (1%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PPKW+LGYHQ R+SY++++ VREI +TF EK IP DVI++DI YM+G+R FTFD+ RFP
Sbjct: 256 LPPKWALGYHQSRYSYETEQEVREIAQTFIEKDIPLDVIYLDIHYMNGYRVFTFDRNRFP 315
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+ K L ADL G + + ++DPG+K + Y +Y G + D + + +G + GEVWPG
Sbjct: 316 NLKQLIADLKQKGIRVVPIVDPGVKEDPEYVIYQEGIRHDYFCKYIEGNVYFGEVWPGKS 375
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
FPD+T KVR WWG + + G++GIWNDMNEP+VF TKTM IH D G
Sbjct: 376 AFPDFTNKKVRKWWGEKHQFYTDLGIEGIWNDMNEPSVFNE-TKTMDVKVIHDND---GD 431
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
+ H HNVYG +M +TY+GMK KRPF+LTRAGF G QRYAA WTGDN S WEH
Sbjct: 432 PKTHRELHNVYGFMMGEATYKGMKKLLNGKRPFLLTRAGFSGIQRYAAVWTGDNRSFWEH 491
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
L MS+ M + LGLSG F GPD+GGF N L RWM +GA P+ R H E
Sbjct: 492 LQMSLPMCMNLGLSGVAFCGPDVGGFAHNTNGELLTRWMQVGAFTPYFRNHCAIGFRRQE 551
Query: 301 PWSFGEE 307
PW+FGE+
Sbjct: 552 PWAFGEK 558
|
Bacillus thermoamyloliquefaciens (taxid: 1425) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 0 |
| >sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=3 | Back alignment and function description |
|---|
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 181/311 (58%), Gaps = 10/311 (3%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP D +W+DI++ +G R FT+DK RFP
Sbjct: 357 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKNRFP 416
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + + DP IK + Y VY +++ +G F G WPG
Sbjct: 417 NPKRMQELLRSKKRKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLS 476
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ SL +Y G I WNDMNEP+VF+ +TM ++ IH G+ E
Sbjct: 477 SYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRGPEQTMQKNAIHHGNWE 536
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ K + +RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 537 ------HRELHNIYGFYHQMATAEGLIKRSKGKERPFVLTRSFFAGSQKYGAVWTGDNTA 590
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L ++G F G DIGGF GN L RW GA PF RGH +
Sbjct: 591 EWSNLKISIPMLLTLSITGISFCGADIGGFIGNPETELLVRWYQAGAYQPFFRGHATMNT 650
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 651 KRREPWLFGEE 661
|
Has alpha-glucosidase activity. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q9BE70|GANC_MACFA Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2 | Back alignment and function description |
|---|
Score = 257 bits (656), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 183/311 (58%), Gaps = 10/311 (3%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP D +W+DI++ +G R FT+DK+RFP
Sbjct: 212 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKKRFP 271
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+P+ + L K + + DP IK + Y VY +++ +G F G WPG
Sbjct: 272 NPERMQELLRSKKRKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLS 331
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ SL +Y G I WNDMNEP+VF+ +TM ++ IH G+ E
Sbjct: 332 SYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRRPEQTMQKNAIHHGNWE 391
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ + + +RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 392 ------HRELHNIYGFYHQMATAEGLIQRSGGKERPFVLTRSFFAGSQKYGAVWTGDNTA 445
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L ++G F G DIGGF GN L RW GA PF RGH +A
Sbjct: 446 EWSYLKISIPMLLTLSITGISFCGADIGGFIGNPETELLVRWYQAGAYQPFFRGHATMNA 505
Query: 297 IDHEPWSFGEE 307
EPW FG+E
Sbjct: 506 KRREPWLFGKE 516
|
Has alpha-glucosidase activity. Macaca fascicularis (taxid: 9541) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q8BVW0|GANC_MOUSE Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2 | Back alignment and function description |
|---|
Score = 254 bits (648), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 180/311 (57%), Gaps = 10/311 (3%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP DV+W+DI++ + + FT+DK+RF
Sbjct: 341 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEDKKYFTWDKKRFA 400
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + + DP IK + Y VY + +++ +G F G WPG
Sbjct: 401 NPKRMQELLRSKKRKLVVISDPHIKVDPDYTVYAQAKEQGFFVKNPEGGDFEGVCWPGLS 460
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ SL +Y G I WNDMNEP+VF+ TM +S +H GD E
Sbjct: 461 SYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRGPELTMHKSAVHYGDWE 520
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDK-RPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ K K RPFVL+R+ F GSQ+Y A WTGDN +
Sbjct: 521 ------HRELHNIYGFYQQMATAEGLIQRSKGKERPFVLSRSFFAGSQKYGAVWTGDNKA 574
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L +SG F G D+GGF GN L RW GA PF RGH +
Sbjct: 575 EWSYLKISIPMLLTLSVSGISFCGADVGGFIGNPEAELLVRWYQAGAYQPFFRGHATMNT 634
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 635 KRREPWLFGEE 645
|
Has alpha-glucosidase activity. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P79403|GANAB_PIG Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 176/306 (57%), Gaps = 10/306 (3%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +SLGYHQ RW+Y + V E+ + F + +PCD IW+DI++ DG R FT+D RFP
Sbjct: 388 LPPLFSLGYHQSRWNYRDEADVLEVNQGFDDHNLPCDFIWLDIEHADGKRYFTWDPSRFP 447
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P+++ L K + ++DP IK + Y V++ + ++++ DG+ + G WPG
Sbjct: 448 QPRTMLEHLASKRRKLVAIVDPHIKVDSSYRVHEELQNLGLYVKTRDGSDYEGWCWPGAA 507
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG---IWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+PD+T K+R+WW + + Y G +WNDMNEP+VF TM + H G E
Sbjct: 508 SYPDFTNPKMRAWWADMFRFENYEGSSSNLYVWNDMNEPSVFNGPEVTMLKDAQHYGGWE 567
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKD-KRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG + +T +G+ L +RPFVL+RA F GSQR+ A WTGDN +
Sbjct: 568 ------HRDLHNIYGFYVHMATADGLVLRSGGVERPFVLSRAFFAGSQRFGAVWTGDNTA 621
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W+HL +SI M L LGL G F G D+GGF N P L RW +GA PF R H D
Sbjct: 622 EWDHLKISIPMCLSLGLVGVSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDT 681
Query: 297 IDHEPW 302
EPW
Sbjct: 682 GRREPW 687
|
Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
| >sp|Q4R4N7|GANAB_MACFA Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 179/309 (57%), Gaps = 16/309 (5%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +SLGYHQ RW+Y + V E+ + F E +PCDVIW+DI++ DG R FT+D RFP
Sbjct: 388 LPPLFSLGYHQSRWNYRDEADVLEVDQGFDEHNLPCDVIWLDIEHADGKRYFTWDPSRFP 447
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P+++ L K + ++DP IK + GY V+D + ++++ DG+ + G WPG
Sbjct: 448 QPRTMLERLASKRRKLVAIVDPHIKVDSGYRVHDELRNLGLYVKTRDGSDYEGWCWPGSA 507
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG------IWNDMNEPAVFKSVTKTMPESNIHRG 174
+PD+T +R+WW ++ F Y+ +G +WNDMNEP+VF TM + H G
Sbjct: 508 GYPDFTNPTMRAWWANM---FSYDNYEGSAPNLFVWNDMNEPSVFNGPEVTMLKDAQHYG 564
Query: 175 DDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKD-KRPFVLTRAGFIGSQRYAATWTGD 233
E H HN+YG+ + +T +G++ +RPFVL RA F GSQR+ A WTGD
Sbjct: 565 GWE------HRDVHNIYGLYVHMATADGLRQRSGGMERPFVLARAFFAGSQRFGAVWTGD 618
Query: 234 NVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTE 293
N + W+HL +SI M L LGL G F G D+GGF N P L RW +GA PF R H
Sbjct: 619 NTAEWDHLKISIPMCLSLGLVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAH 678
Query: 294 SDAIDHEPW 302
D PW
Sbjct: 679 LDTGRRGPW 687
|
Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. Macaca fascicularis (taxid: 9541) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
| >sp|Q14697|GANAB_HUMAN Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3 | Back alignment and function description |
|---|
Score = 248 bits (632), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 180/309 (58%), Gaps = 16/309 (5%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +SLGYHQ RW+Y + V E+ + F + +PCDVIW+DI++ DG R FT+D RFP
Sbjct: 388 LPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNLPCDVIWLDIEHADGKRYFTWDPSRFP 447
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P+++ L K + ++DP IK + GY V++ + ++++ DG+ + G WPG
Sbjct: 448 QPRTMLERLASKRRKLVAIVDPHIKVDSGYRVHEELRNLGLYVKTRDGSDYEGWCWPGSA 507
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG------IWNDMNEPAVFKSVTKTMPESNIHRG 174
+PD+T +R+WW ++ F Y+ +G +WNDMNEP+VF TM + H G
Sbjct: 508 GYPDFTNPTMRAWWANM---FSYDNYEGSAPNLFVWNDMNEPSVFNGPEVTMLKDAQHYG 564
Query: 175 DDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKD-KRPFVLTRAGFIGSQRYAATWTGD 233
E H HN+YG+ + +T +G++ +RPFVL RA F GSQR+ A WTGD
Sbjct: 565 GWE------HRDVHNIYGLYVHMATADGLRQRSGGMERPFVLARAFFAGSQRFGAVWTGD 618
Query: 234 NVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTE 293
N + W+HL +SI M L LGL G F G D+GGF N P L RW +GA PF R H
Sbjct: 619 NTAEWDHLKISIPMCLSLGLVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAH 678
Query: 294 SDAIDHEPW 302
D EPW
Sbjct: 679 LDTGRREPW 687
|
Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
| >sp|Q94502|GANAB_DICDI Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 179/314 (57%), Gaps = 17/314 (5%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+P +SLGYHQC+W+Y S+ V+++ F E IP DVIW+DI++ DG R FT+D FP
Sbjct: 386 LPQMFSLGYHQCKWNYKSEDDVKQVDNGFDENHIPYDVIWLDIEHTDGKRYFTWDNNNFP 445
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P + + K + ++DP IK ++ Y+V+ + +I+ DG + G WPG
Sbjct: 446 TPADMQNIIGAKHRKMVTIVDPHIKRDNNYYVHSEATSKGYYIKNKDGNDYDGWCWPGSS 505
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG------IWNDMNEPAVFKSVTKTMPESNIHRG 174
+ D+T ++R WW + F Y+ G IWNDMNEP+VF PE ++H+
Sbjct: 506 SYLDFTNPEIRKWWAT---QFGYDKYKGSTPNLYIWNDMNEPSVFNG-----PEVSMHKD 557
Query: 175 DDEIGGCQNHSYYHNVYGMLMARSTYEGM--KLADKDKRPFVLTRAGFIGSQRYAATWTG 232
GG + H HN+YG ++ +G+ + AD++ RPFVL+RA + GSQR A WTG
Sbjct: 558 AKHHGGFE-HRDVHNLYGYYYHMASADGLVQRNADQNDRPFVLSRAFYAGSQRIGAIWTG 616
Query: 233 DNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHT 292
DN + W HL +S M+L + L+G FSG D+GGF GN L RW GA PF RGH
Sbjct: 617 DNSAQWSHLEISNPMLLSMNLAGITFSGADVGGFFGNPDAELLTRWYQAGAFQPFFRGHA 676
Query: 293 ESDAIDHEPWSFGE 306
D+ EPW F E
Sbjct: 677 HLDSRRREPWLFNE 690
|
Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from N-linked oligosaccharides on newly synthesized glycoproteins. Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
| >sp|Q8BHN3|GANAB_MOUSE Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 182/314 (57%), Gaps = 16/314 (5%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +SLGYHQ RW+Y + V E+ + F + +PCDVIW+DI++ DG R FT+D RFP
Sbjct: 388 LPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNMPCDVIWLDIEHADGKRYFTWDPTRFP 447
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P ++ L K + ++DP IK + GY V++ ++++ DG+ + G WPG
Sbjct: 448 QPLNMLEHLASKRRKLVAIVDPHIKVDSGYRVHEELRNHGLYVKTRDGSDYEGWCWPGSA 507
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG------IWNDMNEPAVFKSVTKTMPESNIHRG 174
+PD+T ++R+WW ++ F ++ +G +WNDMNEP+VF TM + +H G
Sbjct: 508 SYPDFTNPRMRAWWSNM---FSFDNYEGSAPNLYVWNDMNEPSVFNGPEVTMLKDAVHYG 564
Query: 175 DDEIGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGD 233
E H HN+YG+ + +T +G+ + + +RPFVL+RA F GSQR+ A WTGD
Sbjct: 565 GWE------HRDIHNIYGLYVHMATADGLIQRSGGIERPFVLSRAFFSGSQRFGAVWTGD 618
Query: 234 NVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTE 293
N + W+HL +SI M L L L G F G D+GGF N P L RW +GA PF R H
Sbjct: 619 NTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAH 678
Query: 294 SDAIDHEPWSFGEE 307
D EPW +
Sbjct: 679 LDTGRREPWLLASQ 692
|
Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
| >sp|Q9US55|GLU2A_SCHPO Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gls2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 172/310 (55%), Gaps = 10/310 (3%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +S+GYHQCRW+Y S++ V + F E +P D IW+DI+Y R FT+DK FP
Sbjct: 370 LPPLFSIGYHQCRWNYVSEEDVLNVDAKFDEVDMPYDTIWLDIEYASKRRYFTWDKATFP 429
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTP-FIGEVWPGP 119
+PK++ L K I +LDP IK++ YFV + ++ G + + WPG
Sbjct: 430 NPKAMLEKLDSKSRKLIVILDPHIKNDPNYFVSKELIDYNYAVKDKSGVDNYNADCWPGN 489
Query: 120 CVFPDYTQSKVRSWWGSLVK--DFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
V+ D+ + ++WWGSL + F + IWNDMNEP+VF+ PE+++HR
Sbjct: 490 SVWVDFFNPEAQAWWGSLYEFDRFESDKNLWIWNDMNEPSVFRG-----PETSMHRDAIH 544
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
GG + H HN+YG TY G+ K + RPF+LTR+ F G+ AA W GD ++
Sbjct: 545 YGGWE-HRDIHNIYGHKCINGTYNGLIKRGEGAVRPFILTRSFFAGTSALAANWIGDTMT 603
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
WEHL SI VL G+SG FSG D+ GF GN LF RW +PF R H D
Sbjct: 604 TWEHLRGSIPTVLTNGISGMAFSGADVAGFFGNPDAELFVRWYETAIFYPFFRAHAHIDT 663
Query: 297 IDHEPWSFGE 306
EPW +GE
Sbjct: 664 KRREPWLYGE 673
|
Catalytic subunit of glucosidase 2, which cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 325 | ||||||
| 359474648 | 991 | PREDICTED: alpha-glucosidase 2-like [Vit | 0.972 | 0.318 | 0.840 | 1e-165 | |
| 296088485 | 1057 | unnamed protein product [Vitis vinifera] | 0.972 | 0.298 | 0.840 | 1e-165 | |
| 297831124 | 988 | hypothetical protein ARALYDRAFT_898886 [ | 0.944 | 0.310 | 0.856 | 1e-162 | |
| 18403833 | 991 | heteroglycan glucosidase 1 [Arabidopsis | 0.944 | 0.309 | 0.856 | 1e-161 | |
| 9294522 | 959 | alpha glucosidase-like protein [Arabidop | 0.944 | 0.320 | 0.856 | 1e-161 | |
| 356508232 | 988 | PREDICTED: alpha-glucosidase 2-like [Gly | 0.972 | 0.319 | 0.811 | 1e-161 | |
| 357484583 | 1058 | Alpha glucosidase-like protein [Medicago | 0.972 | 0.298 | 0.808 | 1e-160 | |
| 255557713 | 991 | neutral alpha-glucosidase ab precursor, | 0.972 | 0.318 | 0.827 | 1e-160 | |
| 449456921 | 1058 | PREDICTED: alpha-glucosidase 2-like [Cuc | 0.972 | 0.298 | 0.805 | 1e-158 | |
| 224138396 | 1001 | predicted protein [Populus trichocarpa] | 0.963 | 0.312 | 0.815 | 1e-158 |
| >gi|359474648|ref|XP_002263148.2| PREDICTED: alpha-glucosidase 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 268/319 (84%), Positives = 289/319 (90%), Gaps = 3/319 (0%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKWSLGY QCRWSYDS RV E+ RTFREKGIPCDVIWMDIDYMDGFRCFTFD+ERF
Sbjct: 194 MPPKWSLGYQQCRWSYDSAVRVLEVARTFREKGIPCDVIWMDIDYMDGFRCFTFDQERFS 253
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPKSL DLHLNGFKAIWMLDPGIK EDGYFVYDSGS DVWI KADGTPF+G+VWPGPC
Sbjct: 254 DPKSLGKDLHLNGFKAIWMLDPGIKQEDGYFVYDSGSANDVWIHKADGTPFVGKVWPGPC 313
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPD+TQSK RSWW LVKDFI NGVDGIWNDMNEPAVFK+VTKTMPE N+HRGD E+GG
Sbjct: 314 VFPDFTQSKARSWWACLVKDFISNGVDGIWNDMNEPAVFKTVTKTMPEDNVHRGDAELGG 373
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQNHS+YHNVYGMLMARSTYEGMKLA+++KRPFVLTRAG+IGSQRYAATWTGDN+SNW+H
Sbjct: 374 CQNHSHYHNVYGMLMARSTYEGMKLANENKRPFVLTRAGYIGSQRYAATWTGDNLSNWDH 433
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+ +DHE
Sbjct: 434 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSETGTVDHE 493
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 494 PWSFGEE---CEEVCRLAL 509
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088485|emb|CBI37476.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 268/319 (84%), Positives = 289/319 (90%), Gaps = 3/319 (0%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKWSLGY QCRWSYDS RV E+ RTFREKGIPCDVIWMDIDYMDGFRCFTFD+ERF
Sbjct: 260 MPPKWSLGYQQCRWSYDSAVRVLEVARTFREKGIPCDVIWMDIDYMDGFRCFTFDQERFS 319
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPKSL DLHLNGFKAIWMLDPGIK EDGYFVYDSGS DVWI KADGTPF+G+VWPGPC
Sbjct: 320 DPKSLGKDLHLNGFKAIWMLDPGIKQEDGYFVYDSGSANDVWIHKADGTPFVGKVWPGPC 379
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPD+TQSK RSWW LVKDFI NGVDGIWNDMNEPAVFK+VTKTMPE N+HRGD E+GG
Sbjct: 380 VFPDFTQSKARSWWACLVKDFISNGVDGIWNDMNEPAVFKTVTKTMPEDNVHRGDAELGG 439
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQNHS+YHNVYGMLMARSTYEGMKLA+++KRPFVLTRAG+IGSQRYAATWTGDN+SNW+H
Sbjct: 440 CQNHSHYHNVYGMLMARSTYEGMKLANENKRPFVLTRAGYIGSQRYAATWTGDNLSNWDH 499
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+ +DHE
Sbjct: 500 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSETGTVDHE 559
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 560 PWSFGEE---CEEVCRLAL 575
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297831124|ref|XP_002883444.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] gi|297329284|gb|EFH59703.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 263/307 (85%), Positives = 283/307 (92%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGYHQCRWSY SDKRV EI +TFR+K IP DVIWMDIDYMDGFRCFTFDKERFP
Sbjct: 191 MPPKWALGYHQCRWSYMSDKRVAEIAQTFRDKKIPSDVIWMDIDYMDGFRCFTFDKERFP 250
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP +L DLH NGFKAIWMLDPGIK E+GY+VYDSGSK DVWI +ADG PFIGEVWPGPC
Sbjct: 251 DPSALTKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKNDVWISRADGKPFIGEVWPGPC 310
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPDYT SK RSWW +LVK+F+ NGVDGIWNDMNEPAVFK VTKTMPE+NIHRGDD++GG
Sbjct: 311 VFPDYTNSKARSWWANLVKEFVSNGVDGIWNDMNEPAVFKVVTKTMPENNIHRGDDDLGG 370
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
QNHS+YHNVYGMLMARSTYEGM+LADK+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEH
Sbjct: 371 VQNHSHYHNVYGMLMARSTYEGMELADKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 430
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+ DHE
Sbjct: 431 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSEAGTADHE 490
Query: 301 PWSFGEE 307
PWSFGEE
Sbjct: 491 PWSFGEE 497
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18403833|ref|NP_566736.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|186510357|ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|16648903|gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gi|27311799|gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gi|31711788|gb|AAP68250.1| At3g23640 [Arabidopsis thaliana] gi|332643272|gb|AEE76793.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|332643273|gb|AEE76794.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 263/307 (85%), Positives = 282/307 (91%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGYHQCRWSY SDKRV EI +TFR+K IP DVIWMDIDYMDGFRCFTFDKERFP
Sbjct: 194 MPPKWALGYHQCRWSYMSDKRVAEIAQTFRDKKIPSDVIWMDIDYMDGFRCFTFDKERFP 253
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP +LA DLH NGFKAIWMLDPGIK E+GY+VYDSGSK DVWI +ADG PF GEVWPGPC
Sbjct: 254 DPSALAKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKNDVWISRADGKPFTGEVWPGPC 313
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPDYT SK RSWW +LVK+F+ NGVDGIWNDMNEPAVFK VTKTMPE+NIH GDDE+GG
Sbjct: 314 VFPDYTNSKARSWWANLVKEFVSNGVDGIWNDMNEPAVFKVVTKTMPENNIHHGDDELGG 373
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
QNHS+YHNVYGMLMARSTYEGM+LADK+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEH
Sbjct: 374 VQNHSHYHNVYGMLMARSTYEGMELADKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 433
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+ DHE
Sbjct: 434 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSEAGTDDHE 493
Query: 301 PWSFGEE 307
PWSFGEE
Sbjct: 494 PWSFGEE 500
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|9294522|dbj|BAB02784.1| alpha glucosidase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 263/307 (85%), Positives = 282/307 (91%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGYHQCRWSY SDKRV EI +TFR+K IP DVIWMDIDYMDGFRCFTFDKERFP
Sbjct: 182 MPPKWALGYHQCRWSYMSDKRVAEIAQTFRDKKIPSDVIWMDIDYMDGFRCFTFDKERFP 241
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP +LA DLH NGFKAIWMLDPGIK E+GY+VYDSGSK DVWI +ADG PF GEVWPGPC
Sbjct: 242 DPSALAKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKNDVWISRADGKPFTGEVWPGPC 301
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPDYT SK RSWW +LVK+F+ NGVDGIWNDMNEPAVFK VTKTMPE+NIH GDDE+GG
Sbjct: 302 VFPDYTNSKARSWWANLVKEFVSNGVDGIWNDMNEPAVFKVVTKTMPENNIHHGDDELGG 361
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
QNHS+YHNVYGMLMARSTYEGM+LADK+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEH
Sbjct: 362 VQNHSHYHNVYGMLMARSTYEGMELADKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 421
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+ DHE
Sbjct: 422 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSEAGTDDHE 481
Query: 301 PWSFGEE 307
PWSFGEE
Sbjct: 482 PWSFGEE 488
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508232|ref|XP_003522863.1| PREDICTED: alpha-glucosidase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 259/319 (81%), Positives = 287/319 (89%), Gaps = 3/319 (0%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKWSLGYHQCRWSY SD+RV E+ +TFR+K IPCDV+WMDIDYMDGFRCFTFDKERF
Sbjct: 197 MPPKWSLGYHQCRWSYLSDQRVLEVAKTFRKKSIPCDVVWMDIDYMDGFRCFTFDKERFR 256
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP SL DLH +GFKAIWMLDPGIK E+GYFVYDSGSK DVW+QKADGTP++GEVWPGPC
Sbjct: 257 DPMSLVKDLHYSGFKAIWMLDPGIKQEEGYFVYDSGSKNDVWVQKADGTPYVGEVWPGPC 316
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPDYTQSKVR+WW +LVKDFI NGVDGIWNDMNEPA+FK +TKTMPESN+HRGD E+GG
Sbjct: 317 VFPDYTQSKVRAWWANLVKDFIPNGVDGIWNDMNEPAIFKVLTKTMPESNVHRGDTELGG 376
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQNH +YHNVYG+LMARSTYEGMKLA++ KRPFVLTRAGF GSQRYAATWTGDN+S WEH
Sbjct: 377 CQNHFFYHNVYGLLMARSTYEGMKLANEKKRPFVLTRAGFSGSQRYAATWTGDNLSTWEH 436
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+G++FPFCRGH+E+ DHE
Sbjct: 437 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGSLFPFCRGHSEAGTTDHE 496
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 497 PWSFGEE---CEEVCRLAL 512
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357484583|ref|XP_003612579.1| Alpha glucosidase-like protein [Medicago truncatula] gi|355513914|gb|AES95537.1| Alpha glucosidase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 258/319 (80%), Positives = 286/319 (89%), Gaps = 3/319 (0%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKWSLGY QCRWSY SD+RV E+ +TFREK IPCDVIWMDIDYMDGFRCFTFDKERF
Sbjct: 260 MPPKWSLGYQQCRWSYLSDQRVLEVAKTFREKSIPCDVIWMDIDYMDGFRCFTFDKERFR 319
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPKSL LH +GFK IWMLDPGIK E GYFVYDSGS+ DVW+QKADGT F+G+VWPGPC
Sbjct: 320 DPKSLVESLHYSGFKGIWMLDPGIKQEKGYFVYDSGSENDVWVQKADGTAFVGDVWPGPC 379
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPDYTQSKVR+WW +LVKDF+ NGVDGIWNDMNEPAVFK+VTKTMPESN+HRGD E+GG
Sbjct: 380 VFPDYTQSKVRAWWANLVKDFVSNGVDGIWNDMNEPAVFKAVTKTMPESNVHRGDGELGG 439
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQNHS+YHNVYG+LMARSTYEGMKLA++++RPFVLTRAGF GSQRYAATWTGDN+S WEH
Sbjct: 440 CQNHSFYHNVYGLLMARSTYEGMKLANENRRPFVLTRAGFSGSQRYAATWTGDNLSTWEH 499
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+G++FPFCRGH+E+ DHE
Sbjct: 500 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGSLFPFCRGHSEAGTTDHE 559
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 560 PWSFGEE---CEEVCRLAL 575
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255557713|ref|XP_002519886.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] gi|223540932|gb|EEF42490.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/319 (82%), Positives = 287/319 (89%), Gaps = 3/319 (0%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGY QCRWSYDSDKRV E+ +TFREKGIPCDVIWMDIDYMDGFRCFTFD+ERFP
Sbjct: 194 MPPKWALGYQQCRWSYDSDKRVYEVAKTFREKGIPCDVIWMDIDYMDGFRCFTFDQERFP 253
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P++L DLH GFKAIWMLDPGIK E+GY VYDSGSK DVWIQ+ADG PFIGEVWPGPC
Sbjct: 254 HPQALVKDLHGIGFKAIWMLDPGIKCEEGYHVYDSGSKDDVWIQRADGRPFIGEVWPGPC 313
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
FPD+TQS+VRSWW SLVKDFI NGVDGIWNDMNEPAVFKSVTKTMPESN HRG E+GG
Sbjct: 314 AFPDFTQSRVRSWWASLVKDFISNGVDGIWNDMNEPAVFKSVTKTMPESNTHRGGIELGG 373
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQ+HSYYHNVYGMLMARST+EGMKLA+++KRPFVLTRAGFIGSQ+YAATWTGDN+SNWEH
Sbjct: 374 CQDHSYYHNVYGMLMARSTFEGMKLANENKRPFVLTRAGFIGSQKYAATWTGDNLSNWEH 433
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATP+LFGRWMG+GAMFPFCRGH+E DHE
Sbjct: 434 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPKLFGRWMGVGAMFPFCRGHSEMGTSDHE 493
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 494 PWSFGEE---CEEVCRLAL 509
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449456921|ref|XP_004146197.1| PREDICTED: alpha-glucosidase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 257/319 (80%), Positives = 284/319 (89%), Gaps = 3/319 (0%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGYHQCRWSYDS RV E+ RTFREK IPCDVIW+DIDYM+GFRCFTFD ERF
Sbjct: 266 MPPKWALGYHQCRWSYDSADRVLEVSRTFREKDIPCDVIWIDIDYMNGFRCFTFDPERFA 325
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPK+LA DLH GFKAIWMLDPGIKHE GYFVYDSGS+ DVW+QKADG P++G+VWPGPC
Sbjct: 326 DPKTLADDLHQIGFKAIWMLDPGIKHEKGYFVYDSGSEKDVWVQKADGEPYVGDVWPGPC 385
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFP++TQ+K RSWW +LVKDFI NGVDGIWNDMNEPA+FK+VTKTMPESNIHRGD+E GG
Sbjct: 386 VFPEFTQAKARSWWANLVKDFISNGVDGIWNDMNEPAIFKTVTKTMPESNIHRGDEEFGG 445
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQ+HSYYHNVYGMLMARSTYEGMKLA+ +RPFVLTRAGFIGSQ+YAATWTGDN S+W+H
Sbjct: 446 CQSHSYYHNVYGMLMARSTYEGMKLANSGRRPFVLTRAGFIGSQKYAATWTGDNSSSWDH 505
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISM LQLGLSGQP SGPDIGG+ GNATPRLFGRWMGIGAMFPFCRGH+E DHE
Sbjct: 506 LHMSISMTLQLGLSGQPLSGPDIGGYVGNATPRLFGRWMGIGAMFPFCRGHSEMGTADHE 565
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 566 PWSFGEE---CEEVCRLAL 581
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138396|ref|XP_002326592.1| predicted protein [Populus trichocarpa] gi|222833914|gb|EEE72391.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 260/319 (81%), Positives = 285/319 (89%), Gaps = 6/319 (1%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKWSLGY QCRWSYDSD+RVREI RTFREKGIPCDVIWMDIDYMDGFRCFTFD+
Sbjct: 204 MPPKWSLGYQQCRWSYDSDERVREIARTFREKGIPCDVIWMDIDYMDGFRCFTFDQAY-- 261
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P+SL DLH +GFKAIWMLDPGIK E+GY +YDSGS+ D WI+KADG PF+GEVWPGPC
Sbjct: 262 -PQSLVKDLHDDGFKAIWMLDPGIKKEEGYLIYDSGSENDAWIKKADGEPFVGEVWPGPC 320
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPD+TQSKVR+WW LVKDF NGVDGIWNDMNEPAVFK+VTKTMPESN+H GD+EIGG
Sbjct: 321 VFPDFTQSKVRAWWALLVKDFTSNGVDGIWNDMNEPAVFKTVTKTMPESNLHLGDEEIGG 380
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
CQNHS+YHNVYGMLMARSTYEGMKLA+++KRPFVLTRAGFIGSQRYAATWTGDN+SNWEH
Sbjct: 381 CQNHSHYHNVYGMLMARSTYEGMKLANENKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 440
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
+HMSISMVLQLGLSGQP SGPDIGGF GNATP+LFGRWMG+GAMFPFCRGH+E DHE
Sbjct: 441 VHMSISMVLQLGLSGQPLSGPDIGGFAGNATPKLFGRWMGVGAMFPFCRGHSEKSTNDHE 500
Query: 301 PWSFGEEVLFCSSIVIIAF 319
PWSFGEE C + +A
Sbjct: 501 PWSFGEE---CEEVCRLAL 516
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 325 | ||||||
| TAIR|locus:2088035 | 991 | HGL1 "heteroglycan glucosidase | 0.944 | 0.309 | 0.856 | 5.6e-155 | |
| TAIR|locus:2163976 | 921 | RSW3 "RADIAL SWELLING 3" [Arab | 0.923 | 0.325 | 0.429 | 6.3e-69 | |
| WB|WBGene00009583 | 924 | aagr-3 [Caenorhabditis elegans | 0.926 | 0.325 | 0.411 | 4e-67 | |
| UNIPROTKB|Q8TET4 | 914 | GANC "Neutral alpha-glucosidas | 0.926 | 0.329 | 0.437 | 1.7e-66 | |
| UNIPROTKB|E1BTT7 | 914 | GANC "Uncharacterized protein" | 0.926 | 0.329 | 0.411 | 1.8e-66 | |
| UNIPROTKB|E1BKJ4 | 916 | GANC "Uncharacterized protein" | 0.926 | 0.328 | 0.437 | 2.2e-66 | |
| UNIPROTKB|E2RAA1 | 914 | GANC "Uncharacterized protein" | 0.926 | 0.329 | 0.424 | 7.4e-66 | |
| UNIPROTKB|J9NYZ4 | 738 | GANC "Uncharacterized protein" | 0.926 | 0.407 | 0.424 | 7.4e-66 | |
| UNIPROTKB|G4ML12 | 980 | MGG_08623 "Neutral alpha-gluco | 0.923 | 0.306 | 0.430 | 1.2e-65 | |
| MGI|MGI:1923301 | 898 | Ganc "glucosidase, alpha; neut | 0.926 | 0.335 | 0.430 | 3.2e-65 |
| TAIR|locus:2088035 HGL1 "heteroglycan glucosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 263/307 (85%), Positives = 282/307 (91%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGYHQCRWSY SDKRV EI +TFR+K IP DVIWMDIDYMDGFRCFTFDKERFP
Sbjct: 194 MPPKWALGYHQCRWSYMSDKRVAEIAQTFRDKKIPSDVIWMDIDYMDGFRCFTFDKERFP 253
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP +LA DLH NGFKAIWMLDPGIK E+GY+VYDSGSK DVWI +ADG PF GEVWPGPC
Sbjct: 254 DPSALAKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKNDVWISRADGKPFTGEVWPGPC 313
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPDYT SK RSWW +LVK+F+ NGVDGIWNDMNEPAVFK VTKTMPE+NIH GDDE+GG
Sbjct: 314 VFPDYTNSKARSWWANLVKEFVSNGVDGIWNDMNEPAVFKVVTKTMPENNIHHGDDELGG 373
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
QNHS+YHNVYGMLMARSTYEGM+LADK+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEH
Sbjct: 374 VQNHSHYHNVYGMLMARSTYEGMELADKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 433
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWMG+GAMFPFCRGH+E+ DHE
Sbjct: 434 LHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGAMFPFCRGHSEAGTDDHE 493
Query: 301 PWSFGEE 307
PWSFGEE
Sbjct: 494 PWSFGEE 500
|
|
| TAIR|locus:2163976 RSW3 "RADIAL SWELLING 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 133/310 (42%), Positives = 181/310 (58%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MP ++ GYHQCRW+Y ++ V ++ F E IP DV+W+DI++ DG R FT+D FP
Sbjct: 358 MPQLFATGYHQCRWNYKDEEDVAQVDSKFDEHDIPYDVLWLDIEHTDGKRYFTWDSVLFP 417
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P+ + L G K + ++DP IK +D YF++ +++ +++ + G F G WPG
Sbjct: 418 HPEEMQKKLAAKGRKMVTIVDPHIKRDDSYFLHKEATQMGYYVKDSSGKDFDGWCWPGSS 477
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG---IWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D ++R WWG Y G WNDMNEP+VF TMP +H
Sbjct: 478 SYIDMLSPEIRKWWGGRFSYKNYVGSTPSLYTWNDMNEPSVFNGPEVTMPRDALH----- 532
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDK-RPFVLTRAGFIGSQRYAATWTGDNVS 236
+GG + H HN YG +T +G+ + ++ K RPFVL+RA F G+QRY A WTGDN +
Sbjct: 533 VGGVE-HREVHNAYGYYFHMATSDGLVMREEGKDRPFVLSRAIFPGTQRYGAIWTGDNTA 591
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
WEHL +SI M+L LGL+G FSG DIGGF GN P L RW +GA +PF RGH D
Sbjct: 592 EWEHLRVSIPMILTLGLTGITFSGADIGGFFGNPEPELLVRWYQVGAYYPFFRGHAHHDT 651
Query: 297 IDHEPWSFGE 306
EPW FGE
Sbjct: 652 KRREPWLFGE 661
|
|
| WB|WBGene00009583 aagr-3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 128/311 (41%), Positives = 181/311 (58%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +S+GYHQCRW+Y+ ++ V + + F + +P DVIW+DI++ DG + FT+DK +FP
Sbjct: 362 LPPLFSIGYHQCRWNYNDEQDVATVNQGFDDHDMPMDVIWLDIEHTDGKKYFTWDKHKFP 421
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
P + + G K + ++DP IK +DGY+VY +++++ DG+ F G WPG
Sbjct: 422 TPNDMVDKVAAKGRKMVTIVDPHIKKDDGYYVYKDAKDKGLFVKRVDGSDFEGHCWPGSS 481
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG---IWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+ RS+W Y G IWNDMNEP+VF TM + +IH G E
Sbjct: 482 EYLDFWHPDTRSYWKDQFAFDRYTGSSSNLHIWNDMNEPSVFSGPEITMDKESIHYGGIE 541
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDK-RPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YGM+ +T++GM K RPF+L+RAGFIG+QR AA WTGDN +
Sbjct: 542 ------HREIHNMYGMMYTSATFDGMIARTGGKERPFLLSRAGFIGTQRTAAIWTGDNTA 595
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
+W HL ++ M L L ++G PF G D+GGF GN +L RW A PF R H D
Sbjct: 596 DWGHLEIAAPMTLSLSIAGVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFFRAHAHIDT 655
Query: 297 IDHEPWSFGEE 307
EPW F E+
Sbjct: 656 RRREPWLFSEQ 666
|
|
| UNIPROTKB|Q8TET4 GANC "Neutral alpha-glucosidase C" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 136/311 (43%), Positives = 180/311 (57%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP D +W+DI++ +G R FT+DK RFP
Sbjct: 357 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKNRFP 416
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + + DP IK + Y VY +++ +G F G WPG
Sbjct: 417 NPKRMQELLRSKKRKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLS 476
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ SL +Y G I WNDMNEP+VF+ +TM ++ IH G+ E
Sbjct: 477 SYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRGPEQTMQKNAIHHGNWE 536
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDK-RPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ K K RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 537 ------HRELHNIYGFYHQMATAEGLIKRSKGKERPFVLTRSFFAGSQKYGAVWTGDNTA 590
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L ++G F G DIGGF GN L RW GA PF RGH +
Sbjct: 591 EWSNLKISIPMLLTLSITGISFCGADIGGFIGNPETELLVRWYQAGAYQPFFRGHATMNT 650
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 651 KRREPWLFGEE 661
|
|
| UNIPROTKB|E1BTT7 GANC "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 656 (236.0 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 128/311 (41%), Positives = 181/311 (58%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +SLGYHQCRW+Y+ ++ V+ + F E IP DVIW+DI++ DG R FT+DK++F
Sbjct: 357 LPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFQ 416
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + ++DP IK + Y +Y G + +++ +G F G WPG
Sbjct: 417 NPKKMQELLRKKKRKLVVIVDPHIKADPMYTLYSQGKEKGYFVKDRNGKDFEGICWPGSS 476
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T +VR W+ Y G I WNDMNEP+VFK TM + +H + E
Sbjct: 477 YYLDFTNPEVRKWYADQFAFKTYKGSTNILFVWNDMNEPSVFKGAELTMQKDAVHYNNWE 536
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ K + +RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 537 ------HRELHNLYGFYQQMATAEGLIKRSSGKERPFVLTRSFFAGSQKYGAVWTGDNTA 590
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L + ++G F G D+GGF G+ P L RW GA PF RGH+ +
Sbjct: 591 EWGYLKISIPMLLTISMAGISFCGADVGGFIGDPEPELLVRWYQAGAYQPFFRGHSNMKS 650
Query: 297 IDHEPWSFGEE 307
EPW FGE+
Sbjct: 651 KRREPWLFGEK 661
|
|
| UNIPROTKB|E1BKJ4 GANC "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 136/311 (43%), Positives = 182/311 (58%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP DV+W+DI++ +G R FT+DK+RFP
Sbjct: 359 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEGKRYFTWDKKRFP 418
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K I + +K + Y VY + +++ +G F G WPG
Sbjct: 419 NPKRMQDLLRSKKRKTIVLSKIHVKVDPNYSVYAKAKEQGFFVRNHEGGDFEGVCWPGLS 478
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNG-VD--GIWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ SL +Y G D IWNDMNEP+VFK +TM ++ IH G+ E
Sbjct: 479 SYLDFTNPKVRKWYSSLFAFSVYQGSTDILHIWNDMNEPSVFKGPEQTMQKNAIHHGNWE 538
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDK-RPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ K K RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 539 ------HRELHNIYGFYQQMATTEGLIQRSKGKERPFVLTRSFFAGSQKYGAVWTGDNTA 592
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W HL +SI M+L L ++G F G D+GGF G+ L RW GA PF RGH +
Sbjct: 593 EWSHLKISIPMLLTLSVTGISFCGADVGGFIGDPEAELLVRWYQAGAYQPFFRGHATMNT 652
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 653 KRREPWLFGEE 663
|
|
| UNIPROTKB|E2RAA1 GANC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 132/311 (42%), Positives = 181/311 (58%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP DV+W+DI++ +G R FT+DK+RFP
Sbjct: 357 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEGKRYFTWDKKRFP 416
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + + DP IK + Y VY + +++ +G F G WPG
Sbjct: 417 NPKRMQELLRSKKRKLVVISDPHIKIDPDYSVYSKAKEQGFFVRNHEGGDFEGVCWPGLS 476
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ L Y G I WNDMNEP+VF+ TM ++ +H G+ E
Sbjct: 477 SYLDFTNPKVREWYSGLFTFSAYQGSTDILYIWNDMNEPSVFRGPELTMQKNAVHHGNWE 536
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ + ++ +RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 537 ------HRELHNIYGFYQHMATAEGLIQRSEGKERPFVLTRSFFAGSQKYGAVWTGDNTA 590
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L ++G F G D+GGF GN L RW GA PF RGH
Sbjct: 591 EWSYLKISIPMLLTLSITGISFCGADVGGFIGNPEAELLVRWYQAGAYQPFFRGHATMKT 650
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 651 KRREPWLFGEE 661
|
|
| UNIPROTKB|J9NYZ4 GANC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 132/311 (42%), Positives = 181/311 (58%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP DV+W+DI++ +G R FT+DK+RFP
Sbjct: 207 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEGKRYFTWDKKRFP 266
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + + DP IK + Y VY + +++ +G F G WPG
Sbjct: 267 NPKRMQELLRSKKRKLVVISDPHIKIDPDYSVYSKAKEQGFFVRNHEGGDFEGVCWPGLS 326
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ L Y G I WNDMNEP+VF+ TM ++ +H G+ E
Sbjct: 327 SYLDFTNPKVREWYSGLFTFSAYQGSTDILYIWNDMNEPSVFRGPELTMQKNAVHHGNWE 386
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM-KLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ + ++ +RPFVLTR+ F GSQ+Y A WTGDN +
Sbjct: 387 ------HRELHNIYGFYQHMATAEGLIQRSEGKERPFVLTRSFFAGSQKYGAVWTGDNTA 440
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L ++G F G D+GGF GN L RW GA PF RGH
Sbjct: 441 EWSYLKISIPMLLTLSITGISFCGADVGGFIGNPEAELLVRWYQAGAYQPFFRGHATMKT 500
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 501 KRREPWLFGEE 511
|
|
| UNIPROTKB|G4ML12 MGG_08623 "Neutral alpha-glucosidase AB" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 134/311 (43%), Positives = 184/311 (59%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MP ++SLGYHQCRW+Y SD V+++ R + IP DVIW+DI+Y DG + FT+DK+ F
Sbjct: 396 MPQEFSLGYHQCRWNYISDDDVKDVDRKMDKFHIPYDVIWLDIEYTDGKKYFTWDKDMFK 455
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP + L +G K + ++DP IK+E GY V + D+ ++ DG+ F G WPG
Sbjct: 456 DPLGMTKKLDEHGRKLVVIIDPHIKNEAGYPVVEEMKSKDLAVKTKDGSIFEGWCWPGAS 515
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDG---IWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D SK WW +L + + G IWNDMNEP+VF +MP+ N+H G+ E
Sbjct: 516 HYIDAFNSKAVEWWKTLFQYSSFTGTAENVFIWNDMNEPSVFNGPEVSMPKDNLHHGNWE 575
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGM--KLADKDKRPFVLTRAGFIGSQRYAATWTGDNV 235
H HN+ GM +T++ + + + +RPFVLTR+ F GSQR A WTGDN
Sbjct: 576 ------HRDVHNLNGMTFHNATHQALISRKPGEKRRPFVLTRSFFAGSQRLGAMWTGDNQ 629
Query: 236 SNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESD 295
++WEHL + M+L G++G PFSG D+GGF GN L RW GA +PF RGH D
Sbjct: 630 ASWEHLGAATPMLLSQGIAGFPFSGADVGGFFGNPESDLMARWYQAGAFYPFFRGHAHID 689
Query: 296 AIDHEPWSFGE 306
A EP+ GE
Sbjct: 690 ARRREPYLIGE 700
|
|
| MGI|MGI:1923301 Ganc "glucosidase, alpha; neutral C" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 134/311 (43%), Positives = 180/311 (57%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP +SLGYHQCRW+Y+ ++ V+ + F E IP DV+W+DI++ + + FT+DK+RF
Sbjct: 341 MPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEDKKYFTWDKKRFA 400
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK + L K + + DP IK + Y VY + +++ +G F G WPG
Sbjct: 401 NPKRMQELLRSKKRKLVVISDPHIKVDPDYTVYAQAKEQGFFVKNPEGGDFEGVCWPGLS 460
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGI---WNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+ D+T KVR W+ SL +Y G I WNDMNEP+VF+ TM +S +H GD E
Sbjct: 461 SYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRGPELTMHKSAVHYGDWE 520
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDK-RPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG +T EG+ K K RPFVL+R+ F GSQ+Y A WTGDN +
Sbjct: 521 ------HRELHNIYGFYQQMATAEGLIQRSKGKERPFVLSRSFFAGSQKYGAVWTGDNKA 574
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
W +L +SI M+L L +SG F G D+GGF GN L RW GA PF RGH +
Sbjct: 575 EWSYLKISIPMLLTLSVSGISFCGADVGGFIGNPEAELLVRWYQAGAYQPFFRGHATMNT 634
Query: 297 IDHEPWSFGEE 307
EPW FGEE
Sbjct: 635 KRREPWLFGEE 645
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00003171001 | SubName- Full=Chromosome chr2 scaffold_140, whole genome shotgun sequence; (795 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00003168001 | SubName- Full=Chromosome chr2 scaffold_140, whole genome shotgun sequence; (237 aa) | • | 0.493 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 325 | |||
| PLN02763 | 978 | PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco | 0.0 | |
| cd06604 | 339 | cd06604, GH31_glucosidase_II_MalA, Alpha-glucosida | 0.0 | |
| pfam01055 | 436 | pfam01055, Glyco_hydro_31, Glycosyl hydrolases fam | 1e-140 | |
| cd06603 | 339 | cd06603, GH31_GANC_GANAB_alpha, This family includ | 1e-127 | |
| cd06602 | 339 | cd06602, GH31_MGAM_SI_GAA, This family includes th | 1e-110 | |
| cd06600 | 317 | cd06600, GH31_MGAM-like, This family includes the | 1e-102 | |
| COG1501 | 772 | COG1501, COG1501, Alpha-glucosidases, family 31 of | 1e-101 | |
| cd06589 | 265 | cd06589, GH31, The enzymes of glycosyl hydrolase f | 1e-70 | |
| cd06593 | 308 | cd06593, GH31_xylosidase_YicI, YicI alpha-xylosida | 6e-58 | |
| cd06598 | 317 | cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetra | 1e-57 | |
| cd06591 | 319 | cd06591, GH31_xylosidase_XylS, XylS is a glycosyl | 1e-55 | |
| cd06599 | 317 | cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolas | 2e-55 | |
| cd06601 | 332 | cd06601, GH31_lyase_GLase, GLases (alpha-1,4-gluca | 3e-52 | |
| cd06595 | 292 | cd06595, GH31_xylosidase_XylS-like, This family re | 1e-23 | |
| cd06597 | 340 | cd06597, GH31_transferase_CtsY, CtsY (cyclic tetra | 2e-21 | |
| PRK10658 | 665 | PRK10658, PRK10658, putative alpha-glucosidase; Pr | 3e-19 | |
| PRK10426 | 635 | PRK10426, PRK10426, alpha-glucosidase; Provisional | 2e-17 | |
| cd06594 | 317 | cd06594, GH31_glucosidase_YihQ, YihQ is a bacteria | 8e-17 | |
| cd06596 | 261 | cd06596, GH31_CPE1046, CPE1046 is an uncharacteriz | 5e-14 | |
| cd06592 | 303 | cd06592, GH31_glucosidase_KIAA1161, KIAA1161 is an | 5e-13 |
| >gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
Score = 628 bits (1622), Expect = 0.0
Identities = 258/308 (83%), Positives = 279/308 (90%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPPKW+LGY QCRWSY+S KRV EI RTFREK IPCDV+WMDIDYMDGFRCFTFDKERFP
Sbjct: 182 MPPKWALGYQQCRWSYESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFP 241
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPK LA DLH GFKAIWMLDPGIK E+GYFVYDSG + DVWIQ ADG PF+GEVWPGPC
Sbjct: 242 DPKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPC 301
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGG 180
VFPD+T K RSWW +LVKDF+ NGVDGIWNDMNEPAVFK+VTKTMPE+NIHRGD+E+GG
Sbjct: 302 VFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNEPAVFKTVTKTMPETNIHRGDEELGG 361
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
QNHS+YHNVYGMLMARSTYEGM LA+K+KRPFVLTRAGFIGSQRYAATWTGDN+SNWEH
Sbjct: 362 VQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 421
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
LHMSI MVLQLGLSGQP SGPDIGGF G+ATP+LFGRWMG+GAMFPF RGH+E IDHE
Sbjct: 422 LHMSIPMVLQLGLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHE 481
Query: 301 PWSFGEEV 308
PWSFGEE
Sbjct: 482 PWSFGEEC 489
|
Length = 978 |
| >gnl|CDD|133135 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities | Back alignment and domain information |
|---|
Score = 542 bits (1398), Expect = 0.0
Identities = 184/310 (59%), Positives = 224/310 (72%), Gaps = 4/310 (1%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PPKW+LGY Q RWSY ++ VREI FRE+ IPCD I++DIDYMDG+R FT+DKERFP
Sbjct: 5 LPPKWALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFP 64
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPK L +LH GFK + ++DPG+K + GY VY+ G + D +++ DG +IG VWPG
Sbjct: 65 DPKELIKELHEQGFKVVTIIDPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLS 124
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK-TMPESNIHRGDDEIG 179
FPD+T KVR WWGSL K F+ GVDGIWNDMNEPAVF + K TMP +HR D G
Sbjct: 125 AFPDFTNPKVREWWGSLYKKFVDLGVDGIWNDMNEPAVFNTPGKTTMPRDAVHRLD---G 181
Query: 180 GCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWE 239
G H HNVYG+LMAR+TYEG+K A ++RPF+LTRAG+ G QRYAA WTGDN S+WE
Sbjct: 182 GGGTHEEVHNVYGLLMARATYEGLKKARPNERPFILTRAGYAGIQRYAAVWTGDNRSSWE 241
Query: 240 HLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDH 299
HL +SI M+L LGLSG PF G DIGGF G+ +P L RWM +GA FPF R H+ D
Sbjct: 242 HLRLSIPMLLNLGLSGVPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQ 301
Query: 300 EPWSFGEEVL 309
EPW+FGEEV
Sbjct: 302 EPWAFGEEVE 311
|
Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. Length = 339 |
| >gnl|CDD|216268 pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31 | Back alignment and domain information |
|---|
Score = 402 bits (1036), Expect = e-140
Identities = 165/311 (53%), Positives = 203/311 (65%), Gaps = 18/311 (5%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP W+LG+HQCRW Y S+ VRE+ FRE GIP DVIW+DIDYMDG+R FT+D ERFP
Sbjct: 24 MPPYWALGFHQCRWGYKSEDEVREVVDGFREAGIPLDVIWLDIDYMDGYRDFTWDPERFP 83
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DPK + +LH G K + ++DPGIK Y VYD G + D ++ K DG+ +IG VWPGP
Sbjct: 84 DPKEMLDELHAKGIKVVLIIDPGIKV--DYGVYDEGKEKDYFV-KNDGSDYIGAVWPGPS 140
Query: 121 VFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIG 179
FPD+T + R WW +K+ G+DG W DMNEP+VF G G
Sbjct: 141 AFPDFTNPEARKWWADEIKNLYDELGIDGFWIDMNEPSVFC-------------GGSTHG 187
Query: 180 GCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWE 239
G +H HN+YG+LMAR+TYEG++ +KRPF+L+R+GF GSQRYAA WTGDN S+WE
Sbjct: 188 GGTDHYEVHNLYGLLMARATYEGLRKRRPNKRPFILSRSGFAGSQRYAAHWTGDNTSSWE 247
Query: 240 HLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPR-LFGRWMGIGAMFPFCRGHTESDAID 298
L SI L GLSG PF G DIGGF+GN T L RWM +GA PF R H+ +D
Sbjct: 248 GLRYSIPGGLSFGLSGIPFWGADIGGFNGNPTEAELCVRWMQLGAFSPFFRNHSSNDTKR 307
Query: 299 HEPWSFGEEVL 309
EPW FGEEV
Sbjct: 308 QEPWLFGEEVE 318
|
Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. Length = 436 |
| >gnl|CDD|133134 cd06603, GH31_GANC_GANAB_alpha, This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-127
Identities = 146/313 (46%), Positives = 187/313 (59%), Gaps = 10/313 (3%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP +SLGYHQCRW+Y + V+E+ F E IP DVIW+DI++ DG R FT+DK++FP
Sbjct: 5 LPPLFSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFP 64
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
DP+ + L G K + ++DP IK +DGY+VY ++ +DG F G WPG
Sbjct: 65 DPEKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSS 124
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVD---GIWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
+PD+ +VR WW SL Y G IWNDMNEP+VF TMP+ IH G E
Sbjct: 125 SWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNEPSVFNGPELTMPKDAIHYGGIE 184
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKD-KRPFVLTRAGFIGSQRYAATWTGDNVS 236
H HN+YG+ M +T++G+ + KRPFVLTR+ F GSQRYAA WTGDN +
Sbjct: 185 ------HREVHNIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGSQRYAAIWTGDNTA 238
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
WEHL +SI M+L L + G PF G D+GGF GN L RW GA +PF R H D
Sbjct: 239 TWEHLKISIPMLLSLNICGIPFCGADVGGFFGNPDEELLVRWYQAGAFYPFFRAHAHIDT 298
Query: 297 IDHEPWSFGEEVL 309
EPW FGEE
Sbjct: 299 KRREPWLFGEEYT 311
|
Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. Length = 339 |
| >gnl|CDD|133133 cd06602, GH31_MGAM_SI_GAA, This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
Score = 323 bits (831), Expect = e-110
Identities = 134/316 (42%), Positives = 174/316 (55%), Gaps = 34/316 (10%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MPP W+LG+H CRW Y + V+E+ R GIP DV W DIDYMD R FT D RFP
Sbjct: 5 MPPYWALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFP 64
Query: 61 DPK--SLAADLHLNGFKAIWMLDPGIKH---EDGYFVYDSGSKIDVWIQKADGTPFIGEV 115
K +LH NG + +LDP I Y YD G ++DV+I+ DG+P+IG+V
Sbjct: 65 GLKMPEFVDELHANGQHYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKV 124
Query: 116 WPGPCVFPDYTQSKVRSWWGSLVKDFIYNGV--DGIWNDMNEPAVFKSVTKTMPESNIHR 173
WPG VFPD+ + WW +KDF ++ V DG+W DMNEP+ F V
Sbjct: 125 WPGYTVFPDFLNPNTQEWWTDEIKDF-HDQVPFDGLWIDMNEPSNFYDV----------- 172
Query: 174 GDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGD 233
HN+YG+ A +TY+ ++ KRPFV++R+ F GS RYA W GD
Sbjct: 173 --------------HNLYGLSEAIATYKALQSIPG-KRPFVISRSTFPGSGRYAGHWLGD 217
Query: 234 NVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTE 293
N S WE L SI +L+ L G P G DI GF+G+ T L RWM +GA +PF R H +
Sbjct: 218 NASTWEDLRYSIIGMLEFNLFGIPMVGADICGFNGDTTEELCARWMQLGAFYPFSRNHND 277
Query: 294 SDAIDHEPWSFGEEVL 309
AI EP+ +G V
Sbjct: 278 IGAIPQEPYVWGPSVA 293
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of the tandem GH31 domains of MGAM and SI are included in this family. The domain architecture of GAA includes an N-terminal TFF (trefoil factor family) domain in addition to the GH31 catalytic domain. Deficient GAA expression causes pompe disease, an autosomal recessive genetic disorder also known as glycogen storage disease type II (GSDII). Length = 339 |
| >gnl|CDD|133131 cd06600, GH31_MGAM-like, This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II | Back alignment and domain information |
|---|
Score = 302 bits (774), Expect = e-102
Identities = 127/308 (41%), Positives = 180/308 (58%), Gaps = 28/308 (9%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP W+LGYH R+SY +V E+ +++G P DV+++DI YMD +R FT+D RFP
Sbjct: 5 LPPMWALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFP 64
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKAD-GTPFIGEVWPGP 119
+PK L +LH K + ++DPGI+ + Y + SG + + G F+G++WPG
Sbjct: 65 EPKKLIDELHKRNVKLVTIVDPGIRVDQNYSPFLSG-MDKGKFCEIESGELFVGKMWPGT 123
Query: 120 CVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEI 178
V+PD+T R WW L +++ + GVDGIW DMNEP+ F+ V
Sbjct: 124 TVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNEPSDFEKV---------------- 167
Query: 179 GGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNW 238
HN+YG+ A +T EG + + R F+LTR+GF GSQ+YAA WTGDN ++W
Sbjct: 168 ---------HNLYGLYEAMATAEGFRTSHPRNRIFILTRSGFAGSQKYAAIWTGDNTASW 218
Query: 239 EHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAID 298
+ L +SI +VL L +SG PF G DIGGF G+ + L RW +GA FPF R H +D D
Sbjct: 219 DDLKLSIPLVLGLSISGIPFVGCDIGGFQGDNSMELLVRWYQLGAFFPFYRSHKATDGKD 278
Query: 299 HEPWSFGE 306
EP F +
Sbjct: 279 TEPVFFPD 286
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end and a C-terminal luminal domain. Both of the tandem GH31 domains of MGAM and SI are included in this family. The domain architecture of GAA includes an N-terminal TFF (trefoil factor family) domain in addition to the GH31 catalytic domain. Deficient GAA expression causes pompe disease, an autosomal recessive genetic disorder also known as glycogen storage disease type II (GSDII). GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. Alpha-glucosidase II is a GH31 enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. The MGAM-like family corresponds to subgroup 1 in the Ernst et al classification of GH31 enzymes. Length = 317 |
| >gnl|CDD|224418 COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 313 bits (805), Expect = e-101
Identities = 128/314 (40%), Positives = 174/314 (55%), Gaps = 22/314 (7%)
Query: 1 MPPKWSLG-YHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDID-YMDGFRCFTFDKER 58
+PPKW+LG R++Y + V E RE+ IP DV +DID +MD + FT+D +R
Sbjct: 260 LPPKWALGWLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVLDIDFWMDNWGDFTWDPDR 319
Query: 59 FPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPG 118
FPDPK + A+LH G K I +++P IK + ++ + +++ DG + + WPG
Sbjct: 320 FPDPKQMIAELHEKGIKLIVIINPYIKQD--SPLFKEAIEKGYFVKDPDGEIYQADFWPG 377
Query: 119 PCVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDE 177
FPD+T R WW S K + + GVDG WNDMNEP F
Sbjct: 378 NSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPEPFDGDGFGNGID-------- 429
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSN 237
H HN+Y +L A++ YE +K ++RPF+L+R+G+ GSQRYAA W+GDN S+
Sbjct: 430 ------HEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGSQRYAAHWSGDNRSS 483
Query: 238 WEHLHMSISMVLQLGLSGQPFSGPDIGGFDG--NATPRLFGRWMGIGAMFPFCRGHTESD 295
W+ L SI L L LSG PF G DIGGF G + T L+ RW GA P R H +D
Sbjct: 484 WDSLRESIPAGLSLSLSGIPFWGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLH-GND 542
Query: 296 AIDHEPWSFGEEVL 309
I EPW+FGEE
Sbjct: 543 NIPREPWAFGEETE 556
|
Length = 772 |
| >gnl|CDD|133121 cd06589, GH31, The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 1e-70
Identities = 109/312 (34%), Positives = 147/312 (47%), Gaps = 58/312 (18%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFR--CFTFDKER 58
+PPKW+ GY R+ Y +V E+ RE IP D +D DY DG+ F +D +
Sbjct: 5 LPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGK 64
Query: 59 FPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPG 118
FP+PKS+ +LH NG K + +WI P+I E W
Sbjct: 65 FPNPKSMIDELHDNGVKLV-----------------------LWID-----PYIREWW-- 94
Query: 119 PCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEI 178
V+ SL GVDG W DM EP+ T + ++
Sbjct: 95 --------AEVVKKLLVSL-------GVDGFWTDMGEPSPGDGNIFTGGVVGRVKHEE-- 137
Query: 179 GGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNW 238
HN Y +L A +TYE ++ K+KRPF+L+R+G+ GSQRYA W+GDN S W
Sbjct: 138 --------MHNAYPLLYAEATYEALRKNSKNKRPFILSRSGYAGSQRYAGMWSGDNTSTW 189
Query: 239 EHLHMSISMVLQLGLSGQPFSGPDIGGFDGN-ATPRLFGRWMGIGAMFPFCRGHTESDAI 297
+L I L + +SG PF G DIGGF G + L+ RW GA P R H+ +
Sbjct: 190 GYLRSQIPAGLTMSMSGIPFVGSDIGGFTGGDPSAELYVRWFQFGAFTPIMRFHSWNSPK 249
Query: 298 DHEPWSFGEEVL 309
D EPW+F EEV
Sbjct: 250 DTEPWAFDEEVT 261
|
All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes. The lysosomal acid alpha-glucosidase (GAA) is essential for glycogen degradation and a deficiency or malfunction of this enzyme causes glycogen storage disease II, also known as pompe disease. In the endoplasmic reticulum, alpha-glucosidase II catalyzes the second step in the N-linked oligosaccharide processing pathway that constitutes part of the quality control system for glycoprotein folding and maturation. The intestinal enzymes sucrase-isomaltase (SI) and maltase-glucoamylase (MGAM) play key roles in the final stage of carbohydrate digestion, making alpha-glucosidase inhibitors useful in the treatment of type 2 diabetes. GH31 alpha-glycosidases are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. Length = 265 |
| >gnl|CDD|133124 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 6e-58
Identities = 96/313 (30%), Positives = 140/313 (44%), Gaps = 26/313 (8%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFR--CFTFDKER 58
+PP WS G R Y ++ V E RE+ +PCDVI +D +M F+ F FD +R
Sbjct: 5 LPPAWSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDR 64
Query: 59 FPDPKSLAADLHLNGFK-AIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWP 117
FPDP+ + + L GFK +W+ P I + F ++ ++K DG+ + ++W
Sbjct: 65 FPDPEGMLSRLKEKGFKVCLWIN-PYIAQKSPLF--KEAAEKGYLVKKPDGSVWQWDLWQ 121
Query: 118 GPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNI-HRGDD 176
D+T W+ +K + GVD D E P + + G D
Sbjct: 122 PGMGIIDFTNPDACKWYKDKLKPLLDMGVDCFKTDFGERI---------PTDVVYYDGSD 172
Query: 177 EIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
HN Y +L ++ YE K + V R+ + GSQ+Y W GD S
Sbjct: 173 G-------EKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSAWAGSQKYPVHWGGDCES 225
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
+E + S+ L LGLSG F DIGGF+G P L+ RW G + R H
Sbjct: 226 TFEGMAESLRGGLSLGLSGFGFWSHDIGGFEGTPPPDLYKRWAQFGLLSSHSRLHGSG-- 283
Query: 297 IDHEPWSFGEEVL 309
EPW +GEE +
Sbjct: 284 -YREPWEYGEEAV 295
|
YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. Length = 308 |
| >gnl|CDD|133129 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 1e-57
Identities = 97/318 (30%), Positives = 142/318 (44%), Gaps = 27/318 (8%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRC------FTF 54
+PP+W+LG R+ Y + + V + +T REK P D +D+ + +
Sbjct: 5 LPPRWALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDW 64
Query: 55 DKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQK-ADGTPFIG 113
D++ FPDP + ADL G K I + +P + + K ++K G P +
Sbjct: 65 DRKAFPDPAGMIADLAKKGVKTIVITEPFVLKNSKN--WGEAVKAGALLKKDQGGVPTLF 122
Query: 114 EVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHR 173
+ W G D+ ++W+ K I GV G W D+ EP V
Sbjct: 123 DFWFGNTGLIDWFDPAAQAWFHDNYKKLIDQGVTGWWGDLGEPEVHPP------------ 170
Query: 174 GDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRY-AATWTG 232
D + HN+YG L A+S YEG + ++RPF+L RAGF GSQRY W+G
Sbjct: 171 --DMCHHKGKAAEVHNIYGHLWAKSIYEGYQQNYPNERPFILMRAGFAGSQRYGVIPWSG 228
Query: 233 DNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNAT--PRLFGRWMGIGAMFPFCRG 290
D W+ L + LQ+ +SG + DIGGF G P L+ RW GA P R
Sbjct: 229 DVGRTWDGLKSQPNAALQMSMSGIDYYHSDIGGFAGGDELDPELYTRWFQYGAFDPPFRP 288
Query: 291 HTESDAIDHEPWSFGEEV 308
H + +AI EP +
Sbjct: 289 HAQ-NAIPPEPVFYSIGT 305
|
CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. Length = 317 |
| >gnl|CDD|133122 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 1e-55
Identities = 105/329 (31%), Positives = 152/329 (46%), Gaps = 40/329 (12%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYM--DGFRCFTFDKER 58
M PKW+ G+ Q + Y + + + ++ + +R++GIP DVI D Y G+ + FD ER
Sbjct: 5 MMPKWAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPER 64
Query: 59 FPDPKSLAADLHLNGFK---AIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEV 115
FPDPK++ +LH + +IW P Y + ++ K D P +
Sbjct: 65 FPDPKAMVRELHEMNAELMISIW---PTF--GPETENYKEMDEKG-YLIKTDRGPRVTMQ 118
Query: 116 WPGPCVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAVFKSVTKTMPESNIHRG 174
+ G F D T + R ++ +K Y+ GVD W D EP
Sbjct: 119 FGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAEPEY-------------SVY 165
Query: 175 DDEIGGCQNHSY----YHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRY-AAT 229
D + + H N Y ++ A+ YEG + A +KR +LTR+ + GSQRY A
Sbjct: 166 DFGLDNYRYHLGPGLEVGNAYPLMHAKGIYEGQRAAGDEKRVVILTRSAWAGSQRYGALV 225
Query: 230 WTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPR---------LFGRWMG 280
W+GD S+WE L I+ L +GLSG P+ DIGGF P L+ RW
Sbjct: 226 WSGDIDSSWETLRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQ 285
Query: 281 IGAMFPFCRGH-TESDAIDHEPWSFGEEV 308
GA P R H T +E WS+GEEV
Sbjct: 286 FGAFCPVMRSHGTREPREINEFWSYGEEV 314
|
XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes. Length = 319 |
| >gnl|CDD|133130 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 2e-55
Identities = 110/327 (33%), Positives = 155/327 (47%), Gaps = 41/327 (12%)
Query: 1 MPPKWSLGYHQCRWSY-----DSDKRVREICRTFREKGIPCDVIWMDIDY---MDGFRC- 51
M P+WSLGY Y D+ + + E RE IPCD + Y G R
Sbjct: 5 MVPRWSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYV 64
Query: 52 FTFDKERFPDPKSLAADLHLNGFKAIWMLDPGI--KHEDGYFVYDSGSKIDVWIQKADGT 109
F ++K+RFPDP + A H G + + PG+ H Y + +I+ DG
Sbjct: 65 FNWNKDRFPDPAAFVAKFHERGIRLAPNIKPGLLQDHPR----YKELKEAGAFIKPPDGR 120
Query: 110 -PFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAVFKSVTKTMP 167
P IG+ W G F D+T + R WW VK+ + + G+D WND NE ++
Sbjct: 121 EPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDNNEYEIW-------- 172
Query: 168 ESNIHRGDDEIGGCQNHSYYHN------VYGMLMARSTYEGMKLADKDKRPFVLTRAGFI 221
D+ C V LMAR+++E ++RP++++R+GF
Sbjct: 173 --------DDDAVCDGFGKPGTIGELRPVQPNLMARASHEAQAEHYPNRRPYIVSRSGFA 224
Query: 222 GSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNA-TPRLFGRWMG 280
G QRYA TW+GDN ++W+ L +I+M L +GLSG G DIGGF G A P LF RW+
Sbjct: 225 GIQRYAQTWSGDNRTSWKTLRYNIAMGLGMGLSGVANIGHDIGGFAGPAPEPELFVRWVQ 284
Query: 281 IGAMFP-FCRGHTESDAIDHEPWSFGE 306
G P FC +D EPW + E
Sbjct: 285 NGIFQPRFCIHSWNTDNTVTEPWMYPE 311
|
The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. Length = 317 |
| >gnl|CDD|133132 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end | Back alignment and domain information |
|---|
Score = 174 bits (444), Expect = 3e-52
Identities = 99/330 (30%), Positives = 152/330 (46%), Gaps = 54/330 (16%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+ P+++LG+HQ + Y + + E+ +R+ IP D + +D+D+ D +R FT + FP
Sbjct: 5 LKPRYALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFP 64
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFI--GEVWPG 118
+PK + +LH G K + I TP I G
Sbjct: 65 NPKEMFDNLHNKGLKC-------------------STNI---------TPVISYGGGLGS 96
Query: 119 PCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAV--FKSVTKTMPESNIHRGDD 176
P ++PD + VR WWG+ K G++ +W DM PA+ K P + DD
Sbjct: 97 PGLYPDLGRPDVREWWGNQYKYLFDIGLEFVWQDMTTPAIMPSYGDMKGFP-PRLLVTDD 155
Query: 177 EIGGCQNHSY-----YHNVYGMLMARSTYEGMKL--ADKDKRPFVLTRAGFIGSQRYAAT 229
N N+Y + ++T+ G+ A K+KR F++ R + G QR+A
Sbjct: 156 SYEN--NVKRKPAIELWNLYSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGMQRFAGL 213
Query: 230 WTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGF---DGN-------ATPRLFGRWM 279
WTGDN S+W+ L ++I+ VL LG+SG P +G DIGGF DG P L RW
Sbjct: 214 WTGDNSSSWDFLQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPELLIRWY 273
Query: 280 GIGAMFPFCRGHTES--DAIDHEPWSFGEE 307
G + P+ R H + EP + +E
Sbjct: 274 QAGFLLPWFRNHYDRKIRQKFQEPAKYFQE 303
|
GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes. Length = 332 |
| >gnl|CDD|133126 cd06595, GH31_xylosidase_XylS-like, This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 1e-23
Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 56/323 (17%)
Query: 1 MPPKWSLGYHQCR-WSYDSDKRVREICRTFREKGIPCDVIWMDID---------YMDGFR 50
+ P+++ G R W Y SD+ + F++ IP DV+ +D+D Y G+
Sbjct: 6 LLPRYAFGNWWSRYWPY-SDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWT 64
Query: 51 CFTFDKERFPDPKSLAADLHLNGFKAIWMLDP--GIK-HEDGYFVYDSGSKIDVWIQKAD 107
++++++ FPDP+ L DLH G K L P GI+ HED Y +D
Sbjct: 65 GYSWNRKLFPDPEKLLQDLHDRGLKVTLNLHPADGIRAHEDQYPEMAKALGVDP--ATEG 122
Query: 108 GTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMP 167
F P + + +++ ++ + GVD W D +
Sbjct: 123 PILFD-------LTNPKF----MDAYFDNVHRPLEKQGVDFWWLDWQQ------------ 159
Query: 168 ESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYA 227
G + ++V+ + AR +RP + +R +GS RY
Sbjct: 160 -----GNRTRTPGLDPLWWLNHVHYLDSAR----------NGRRPLIFSRWAGLGSHRYP 204
Query: 228 ATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGF-DGNATPRLFGRWMGIGAMFP 286
++GD + +W L G + DIGG G P L+ RW+ G P
Sbjct: 205 IGFSGDTIISWASLAFQPYFTATASNIGYGYWSHDIGGHMLGVTDPELYTRWIQFGVFSP 264
Query: 287 FCRGHTESDA-IDHEPWSFGEEV 308
R H+ + + EPW + EE
Sbjct: 265 ILRLHSTKNPFNEKEPWLYEEEA 287
|
Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. Length = 292 |
| >gnl|CDD|133128 cd06597, GH31_transferase_CtsY, CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 2e-21
Identities = 84/343 (24%), Positives = 128/343 (37%), Gaps = 56/343 (16%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDV-------------IWMDIDYM- 46
+ PKW+ G +D+ V E GIP V ++ D Y
Sbjct: 5 LLPKWAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTP 64
Query: 47 -DGFRCFTFDKERFP------DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKI 99
DG ++D FP +PK + +LH G K + P IK +
Sbjct: 65 KDGGAPLSYDDFSFPVEGRWPNPKGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDED 124
Query: 100 -----DVWIQKADGTPF-IGEVWPGPCVFPDYTQSKVRSWWGS----LVKDFIYNGVDGI 149
+ +Q+ G P+ I W + D+T + WW LV + G+DG
Sbjct: 125 YAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPEAAQWWMEKRRYLVDEL---GIDGF 181
Query: 150 WNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKD 209
D E V+ + + RGD+ N Y R+ + ++ A KD
Sbjct: 182 KTDGGE-HVWGR---DLHFRDGRRGDEM----------RNTYPNHYVRAYNDFLRRAKKD 227
Query: 210 KRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN 269
+RAG+ G+Q + W GD S + S+ L SG P+ G D+ GF G+
Sbjct: 228 --GVTFSRAGYTGAQAHGIFWAGDENSTFGAFRWSVFAGLSASASGIPYWGWDLAGFTGD 285
Query: 270 -ATPRLFGRWMGIGAMFPFCRGHTE-----SDAIDHEPWSFGE 306
T L+ R + A P + H+E S D PW+ E
Sbjct: 286 VPTAELYVRSTAMAAFVPIMQYHSEFNGHSSPNEDRTPWNIAE 328
|
CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. Length = 340 |
| >gnl|CDD|236731 PRK10658, PRK10658, putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Score = 88.0 bits (219), Expect = 3e-19
Identities = 87/326 (26%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 2 PPKWSLGYHQCRW-------SYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFR-C-F 52
PP WS G W +YD + V E+ +P V D +M F+ C F
Sbjct: 263 PPAWSFGL----WLTTSFTTNYD-EATVNSFIDGMAERDLPLHVFHFDCFWMKEFQWCDF 317
Query: 53 TFDKERFPDPKSLAADLHLNGFK-AIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPF 111
+D FPDP+ + L G K +W ++P I + F G + +++ DG+
Sbjct: 318 EWDPRTFPDPEGMLKRLKAKGLKICVW-INPYIAQKSPLF--KEGKEKGYLLKRPDGS-- 372
Query: 112 IGEVW------PGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE--P--AVFKS 161
VW PG + D+T W+ +K + GVD D E P V+
Sbjct: 373 ---VWQWDKWQPGMAIV-DFTNPDACKWYADKLKGLLDMGVDCFKTDFGERIPTDVVW-- 426
Query: 162 VTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFI 221
G D HN Y L ++ ++ +K + + R+ +
Sbjct: 427 ----------FDGSDPQK-------MHNYYTYLYNKTVFDVLKETRGEGEAVLFARSATV 469
Query: 222 GSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGI 281
G Q++ W GD SN+E + S+ L LGLSG F DIGGF+ AT ++ RW
Sbjct: 470 GGQQFPVHWGGDCYSNYESMAESLRGGLSLGLSGFGFWSHDIGGFENTATADVYKRWCAF 529
Query: 282 GAMFPFCRGHTESDAIDHEPWSFGEE 307
G + R H PW++ EE
Sbjct: 530 GLLSSHSRLHGSKSY--RVPWAYDEE 553
|
Length = 665 |
| >gnl|CDD|236691 PRK10426, PRK10426, alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 76/302 (25%), Positives = 109/302 (36%), Gaps = 60/302 (19%)
Query: 20 KRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTF----------DKERFPDPKSLAADL 69
+ V++ T R G+ + IW G R +F D ER+P S L
Sbjct: 221 EVVQKKLDTMRNAGVKVNGIW--AQDWSGIRMTSFGKRLMWNWKWDSERYPQLDSRIKQL 278
Query: 70 HLNGFKAIWMLDPGI---------KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+ G + + ++P + E GY + ADG ++ E
Sbjct: 279 NEEGIQFLGYINPYLASDGDLCEEAAEKGYLA-----------KDADGGDYLVEFGEFYA 327
Query: 121 VFPDYTQSKVRSWWGSLVKD-FIYNGVDGIWNDMNEPAVFKSVTKTMP-ESNIHRGDD-E 177
D T + W+ ++K I G G D E +P ++ +H G E
Sbjct: 328 GVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGE---------YLPTDAYLHNGVSAE 378
Query: 178 IGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYA-ATWTGD-NV 235
I HN + L A+ YE ++ K RAG+ GSQ+Y+ W GD NV
Sbjct: 379 I--------MHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTGSQKYSTLFWAGDQNV 430
Query: 236 SNWEH--LHMSISMVLQLGLSGQPFSGPDIGG----FDGNATPRLFGRWMGIGAMFPFCR 289
L + L LG+SG DIGG F T L RW A P R
Sbjct: 431 DWSLDDGLASVVPAALSLGMSGHGLHHSDIGGYTTLFGMKRTKELLLRWCEFSAFTPVMR 490
Query: 290 GH 291
H
Sbjct: 491 TH 492
|
Length = 635 |
| >gnl|CDD|133125 cd06594, GH31_glucosidase_YihQ, YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 8e-17
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 31/249 (12%)
Query: 55 DKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGE 114
D ER+P L +L G + + ++P + +DG Y+ ++ ADG+P++ +
Sbjct: 66 DPERYPGLDELIEELKARGIRVLTYINPYLA-DDGPLYYEEAKDAGYLVKDADGSPYLVD 124
Query: 115 VWPGPCVFPDYTQSKVRSWWGSLVKD-FIYNGVDGIWNDMNE--PAVFKSVTKTMPESNI 171
C D T R W+ ++K+ + G+ G D E P + +
Sbjct: 125 FGEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGEYLPFDAVLHSGEDAAT-- 182
Query: 172 HRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAAT-W 230
HN Y L A+ E ++ A K R+GF GSQ+Y+ W
Sbjct: 183 ---------------MHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFTGSQKYSTLFW 227
Query: 231 TGDNVSNWEHLHMSISMVLQ----LGLSGQPFSGPDIGGF----DGNATPRLFGRWMGIG 282
GD + +W+ H + V+ GLSG DIGG+ T L RW +
Sbjct: 228 AGDQMVSWD-AHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNGYVRTEELLLRWAEMA 286
Query: 283 AMFPFCRGH 291
A P R H
Sbjct: 287 AFTPVMRTH 295
|
Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Length = 317 |
| >gnl|CDD|133127 cd06596, GH31_CPE1046, CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 5e-14
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 209 DKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGG-FD 267
+ RPF++T G+ G+QRYA WTGD +WE++ I + GLSGQP + D+ G F
Sbjct: 144 NARPFIVTVDGWAGTQRYAGIWTGDQSGSWEYIRFHIPTYIGSGLSGQPNTTSDVDGIFG 203
Query: 268 GNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEV 308
G+ P + R + A P + A D +PW FGE
Sbjct: 204 GS--PETYTRDLQWKAFTPVLMTMSGWAANDKQPWVFGEPY 242
|
The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. Length = 261 |
| >gnl|CDD|133123 cd06592, GH31_glucosidase_KIAA1161, KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 5e-13
Identities = 73/326 (22%), Positives = 112/326 (34%), Gaps = 60/326 (18%)
Query: 3 PKWSLGYHQCRWSYD-SDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPD 61
P WS R+ D + + V + + G P I +D ++ + F FD +FPD
Sbjct: 15 PIWSTW---ARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYGDFDFDPTKFPD 71
Query: 62 PKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGT-PFIGEVWPGPC 120
PK + LH GF+ + P I + F + + + G P + W G
Sbjct: 72 PKGMIDQLHDLGFRVTLWVHPFINTDSENFRE--AVEKGYLVSEPSGDIPALTRWWNGTA 129
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNE----PAVFKSVTKTMPESNIHRGD 175
D+T + W+ S +K G+D D E P + + +
Sbjct: 130 AVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAGEASYLPQDYVTEDPLL--------- 180
Query: 176 DEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWT-GDN 234
N Y +Y ++A + RAG SQ D
Sbjct: 181 -------NPDEYTRLYAEMVAEFG------------DLIEVRAG-WRSQGLPLFVRMMDK 220
Query: 235 VSNWEH---LHMSISMVLQLGLSGQPFSGPD-IGGFDGNATPR-------LFGRWMGIGA 283
S+W L I L +GL G PF PD IGG L+ RW+ + A
Sbjct: 221 DSSWGGDNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNSDDELPDKELYIRWLQLSA 280
Query: 284 MFPFCRGHTESDAIDHEPWSFGEEVL 309
P + PW + +EV+
Sbjct: 281 FLPVMQ-------FSIAPWQYDDEVV 299
|
Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. Length = 303 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 325 | |||
| PLN02763 | 978 | hydrolase, hydrolyzing O-glycosyl compounds | 100.0 | |
| cd06604 | 339 | GH31_glucosidase_II_MalA Alpha-glucosidase II (alp | 100.0 | |
| cd06603 | 339 | GH31_GANC_GANAB_alpha This family includes the clo | 100.0 | |
| cd06600 | 317 | GH31_MGAM-like This family includes the following | 100.0 | |
| cd06598 | 317 | GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide | 100.0 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 100.0 | |
| cd06601 | 332 | GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) | 100.0 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 100.0 | |
| cd06591 | 319 | GH31_xylosidase_XylS XylS is a glycosyl hydrolase | 100.0 | |
| cd06599 | 317 | GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 | 100.0 | |
| KOG1066 | 915 | consensus Glucosidase II catalytic (alpha) subunit | 100.0 | |
| cd06597 | 340 | GH31_transferase_CtsY CtsY (cyclic tetrasaccharide | 100.0 | |
| cd06594 | 317 | GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl | 100.0 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 100.0 | |
| COG1501 | 772 | Alpha-glucosidases, family 31 of glycosyl hydrolas | 100.0 | |
| PF01055 | 441 | Glyco_hydro_31: Glycosyl hydrolases family 31 ; In | 100.0 | |
| cd06595 | 292 | GH31_xylosidase_XylS-like This family represents a | 100.0 | |
| PRK10426 | 635 | alpha-glucosidase; Provisional | 100.0 | |
| cd06589 | 265 | GH31 The enzymes of glycosyl hydrolase family 31 ( | 100.0 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 100.0 | |
| KOG1065 | 805 | consensus Maltase glucoamylase and related hydrola | 100.0 | |
| cd06596 | 261 | GH31_CPE1046 CPE1046 is an uncharacterized Clostri | 100.0 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 99.81 | |
| PLN03231 | 357 | putative alpha-galactosidase; Provisional | 99.5 | |
| COG3345 | 687 | GalA Alpha-galactosidase [Carbohydrate transport a | 99.46 | |
| PLN02229 | 427 | alpha-galactosidase | 99.35 | |
| PLN02692 | 412 | alpha-galactosidase | 99.35 | |
| PLN02899 | 633 | alpha-galactosidase | 99.34 | |
| PLN02808 | 386 | alpha-galactosidase | 99.31 | |
| KOG2366 | 414 | consensus Alpha-D-galactosidase (melibiase) [Carbo | 98.48 | |
| PLN02355 | 758 | probable galactinol--sucrose galactosyltransferase | 98.07 | |
| PLN02219 | 775 | probable galactinol--sucrose galactosyltransferase | 97.92 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 97.87 | |
| PLN02684 | 750 | Probable galactinol--sucrose galactosyltransferase | 97.86 | |
| PLN02711 | 777 | Probable galactinol--sucrose galactosyltransferase | 97.81 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 97.53 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 97.51 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 97.51 | |
| PF05691 | 747 | Raffinose_syn: Raffinose synthase or seed imbibiti | 97.37 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 97.35 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 97.35 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 97.28 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 97.23 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 97.18 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 97.07 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 97.04 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 96.98 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 96.6 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 96.51 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 96.49 | |
| PLN02361 | 401 | alpha-amylase | 96.43 | |
| PLN02784 | 894 | alpha-amylase | 96.25 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 96.18 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 96.11 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 96.09 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 96.06 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 96.0 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 95.73 | |
| PF13199 | 559 | Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: | 95.64 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 95.54 | |
| PLN02960 | 897 | alpha-amylase | 95.5 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 95.45 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 95.36 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 95.36 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 95.22 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 95.2 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 95.11 | |
| PLN03244 | 872 | alpha-amylase; Provisional | 95.08 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 95.04 | |
| KOG0471 | 545 | consensus Alpha-amylase [Carbohydrate transport an | 94.27 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 94.24 | |
| PLN02982 | 865 | galactinol-raffinose galactosyltransferase/ghydrol | 94.22 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 94.05 | |
| COG2342 | 300 | Predicted extracellular endo alpha-1,4 polygalacto | 93.72 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 91.84 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 90.48 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 90.09 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 87.56 | |
| TIGR02455 | 688 | TreS_stutzeri trehalose synthase, Pseudomonas stut | 87.35 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 87.31 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 83.95 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 82.08 |
| >PLN02763 hydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-87 Score=675.34 Aligned_cols=318 Identities=81% Similarity=1.481 Sum_probs=305.9
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||||||+|.++++|++++++||+++||||+||+|.+|+.++++|+||+++||||++|+++||++|+|+++++
T Consensus 182 mpP~WALGy~qSR~~Y~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP~~mv~~Lh~~G~kvv~ii 261 (978)
T PLN02763 182 MPPKWALGYQQCRWSYESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPKGLADDLHSIGFKAIWML 261 (978)
T ss_pred CCchHHhheeeccCCCCCHHHHHHHHHHHHHcCCCceEEEEehhhhcCCCceeECcccCCCHHHHHHHHHHCCCEEEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFK 160 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~ 160 (325)
+|.|..+++|.+|+++.++++|+++++|++|++.+|||.++++|||||+|++||.++++++++.||||||+|+|||+.|+
T Consensus 262 dPgI~~d~gY~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W~DmnEPa~f~ 341 (978)
T PLN02763 262 DPGIKAEEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNEPAVFK 341 (978)
T ss_pred cCCCccCCCCHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEEccCCCCcccc
Confidence 99999888899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCchH
Q 020492 161 SVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240 (325)
Q Consensus 161 ~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W~~ 240 (325)
....++|.+..|.+....++..+|.++||+|++++++++||++++..+++|||++|||+|+|+|||+++|+||+.++|++
T Consensus 342 ~~~~t~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRSgfaGsQRYaa~WtGDn~SsWe~ 421 (978)
T PLN02763 342 TVTKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH 421 (978)
T ss_pred CCcCCCCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEccccCcCCCCceEECCCccCCHHH
Confidence 76678899888887655666667899999999999999999999888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHHH
Q 020492 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIA 318 (325)
Q Consensus 241 L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~ 318 (325)
|+.+|+++|++|+||+||||+|||||.+++++|||+||+|+|||+|+||+|+..++.++|||+|++++++++|++|++
T Consensus 422 L~~sI~~~LnlgLSGipf~G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~i~R~ai~L 499 (978)
T PLN02763 422 LHMSIPMVLQLGLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEEVCRLALKR 499 (978)
T ss_pred HHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988878999999999999999999975
|
|
| >cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-87 Score=621.80 Aligned_cols=316 Identities=58% Similarity=1.113 Sum_probs=297.2
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||+|+++|.++++|+++++++++++||+|+|++|.+|+.++++|+||+++||||++|+++||++|+|+++|+
T Consensus 5 l~P~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~fPdp~~m~~~l~~~g~~~~~~~ 84 (339)
T cd06604 5 LPPKWALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFPDPKELIKELHEQGFKVVTII 84 (339)
T ss_pred CCchHHHhHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCceeeccccCCCHHHHHHHHHHCCCEEEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFK 160 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~ 160 (325)
+|+|..++++.+|+++.++++|+++++|+++++.+|+|.++++|||||+|++||.++++++++.||||||+|+|||+.++
T Consensus 85 ~P~v~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~Gvdg~w~D~~Ep~~~~ 164 (339)
T cd06604 85 DPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFVDLGVDGIWNDMNEPAVFN 164 (339)
T ss_pred eCceeCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHHhhCCCceEeecCCCccccC
Confidence 99999876678999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCC-CCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCch
Q 020492 161 SVTK-TMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWE 239 (325)
Q Consensus 161 ~~~~-~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W~ 239 (325)
.... ++|.+..|.+... ...+.++||+|++++++++++++++..+++|+++++||+++|+|||+++|+||+.++|+
T Consensus 165 ~~~~~~~p~~~~~~~~~~---~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~ssW~ 241 (339)
T cd06604 165 TPGKTTMPRDAVHRLDGG---GGTHEEVHNVYGLLMARATYEGLKKARPNERPFILTRAGYAGIQRYAAVWTGDNRSSWE 241 (339)
T ss_pred CcccccCCccceeeCCCC---CCcHhHhcchhhHHHHHHHHHHHHHhCCCCCcEEEEecccccccccccccCCcccCCHH
Confidence 5432 3787777654211 12578899999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHHHh
Q 020492 240 HLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF 319 (325)
Q Consensus 240 ~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~~ 319 (325)
+|+.+|+++|++|++|+|+||+|||||.+++++|||+||+|+|||+|+||+|+..+..+++||.|++++.+++|++++|.
T Consensus 242 ~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lR 321 (339)
T cd06604 242 HLRLSIPMLLNLGLSGVPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIAREAIKLR 321 (339)
T ss_pred HHHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877789999999999999999999985
|
Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. |
| >cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=616.12 Aligned_cols=314 Identities=46% Similarity=0.902 Sum_probs=295.9
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||+||++|.++++|+++++++++++||||+|+||.+|+.++++|+||+++||||++|+++||++|+|+++|+
T Consensus 5 lpP~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~ 84 (339)
T cd06603 5 LPPLFSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDPEKMQEKLASKGRKLVTIV 84 (339)
T ss_pred CCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCHHHHHHHHHHCCCEEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh---CCccEEEecCCCCC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY---NGVDGIWNDMNEPA 157 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~---~Gvdg~~~D~~e~~ 157 (325)
+|+|..++++.+|+++.++++++++++|+++++.+|+|.++++|||||+|++||.+++++++. .|++|+|+|++||+
T Consensus 85 ~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~Ep~ 164 (339)
T cd06603 85 DPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNEPS 164 (339)
T ss_pred cCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCCcc
Confidence 999998766789999999999999999999999999999999999999999999999998774 68999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcC-CCCcEEEEccccCCCCcceeeecCCCCC
Q 020492 158 VFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADK-DKRPFVLTRAGFIGSQRYAATWTGDNVS 236 (325)
Q Consensus 158 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~-~~r~~~~srs~~~G~qr~~~~w~GD~~s 236 (325)
.|+..+.++|.++.+.+. ..+.++||+|+++++++++|++++..+ ++|||+++||+++|+|||+++|+||+.|
T Consensus 165 ~f~~~~~~~p~d~~~~~~------~~~~~~hN~y~~~~~~a~~e~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s 238 (339)
T cd06603 165 VFNGPELTMPKDAIHYGG------IEHREVHNIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGSQRYAAIWTGDNTA 238 (339)
T ss_pred ccCCCCCcCCCcceecCC------CcHHHHhhHhHHHHHHHHHHHHHHhhccCCceEEEEecccccccceeeeeCCCccC
Confidence 988766678877665431 247889999999999999999998754 6899999999999999999999999999
Q ss_pred CchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHH
Q 020492 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI 316 (325)
Q Consensus 237 ~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~ 316 (325)
+|+.|+.+|+++|++|++|+|+||+|||||.+++++|||+||+|+|||+|+||+|+..+...++||.|++++++++|+++
T Consensus 239 ~W~~L~~~i~~~L~~~l~G~~~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~ 318 (339)
T cd06603 239 TWEHLKISIPMLLSLNICGIPFCGADVGGFFGNPDEELLVRWYQAGAFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAI 318 (339)
T ss_pred CHHHHHHHHHHHHHHhhcCccccCCccCCcCCCCCHHHHHHHHHHhhcCceeecCCCCCCCCCCCeecChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877778999999999999999999
Q ss_pred HHhh
Q 020492 317 IAFF 320 (325)
Q Consensus 317 ~~~~ 320 (325)
+|..
T Consensus 319 ~lRy 322 (339)
T cd06603 319 RLRY 322 (339)
T ss_pred HHHH
Confidence 9864
|
Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. |
| >cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-86 Score=609.55 Aligned_cols=294 Identities=43% Similarity=0.877 Sum_probs=282.1
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||+|+++|.++++|+++++++++++||+|+|+||.+|++++++|+||+++||||++|+++||++|+|+++|+
T Consensus 5 lpP~walG~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~i~~l~~~g~k~~~~~ 84 (317)
T cd06600 5 LPPMWALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFPEPKKLIDELHKRNVKLVTIV 84 (317)
T ss_pred CCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCceeechhcCCCHHHHHHHHHHCCCEEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCCCCcc
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNEPAVF 159 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e~~~~ 159 (325)
+|+|..++.+..|.++.++++|+++.+|+++++.+|+|.++++|||||+|++||.+++++++ +.||||||+|+|||+.+
T Consensus 85 ~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~~ 164 (317)
T cd06600 85 DPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNEPSDF 164 (317)
T ss_pred eccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCCCCccH
Confidence 99999876677899999999999999999999999999999999999999999999999887 79999999999998642
Q ss_pred CCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCch
Q 020492 160 KSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWE 239 (325)
Q Consensus 160 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W~ 239 (325)
.++||+|++++++++++++++..+++||++++||+++|+|||+++|+||+.|+|+
T Consensus 165 -------------------------~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W~ 219 (317)
T cd06600 165 -------------------------EKVHNLYGLYEAMATAEGFRTSHPRNRIFILTRSGFAGSQKYAAIWTGDNTASWD 219 (317)
T ss_pred -------------------------HHhcchhhHHHHHHHHHHHHHhcCCCCceEEEeccccccCCccceECCcccccHH
Confidence 3579999999999999999998788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHHHh
Q 020492 240 HLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF 319 (325)
Q Consensus 240 ~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~~ 319 (325)
.|+.+|+++|++|++|+||+|+|||||.+++++|||+||+|+|||+|+||+|+..+..++|||.|++++.+++|+++++.
T Consensus 220 ~L~~~i~~~l~~gl~G~p~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lR 299 (317)
T cd06600 220 DLKLSIPLVLGLSISGIPFVGCDIGGFQGDNSMELLVRWYQLGAFFPFYRSHKATDGKDTEPVFFPDYYKEKVREIVELR 299 (317)
T ss_pred HHHHHHHHHHHHHhcCCCccCcccCCCCCCCCHHHHHHHHHHhhcCceeeccCCCCCCCCCCeecCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876679999999999999999999985
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do |
| >cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-84 Score=598.01 Aligned_cols=301 Identities=33% Similarity=0.634 Sum_probs=278.1
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC------CceeeeecCCCCCChHHHHHHHHHCCC
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD------GFRCFTFDKERFPDPKSLAADLHLNGF 74 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------~~~~f~~d~~~FPd~~~~~~~L~~~G~ 74 (325)
|||+||||||+|+++|.++++|+++++++++++||||+|++|++|++ .+++|+||+++||||++|+++||++|+
T Consensus 5 l~P~wa~G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~ 84 (317)
T cd06598 5 LPPRWALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLAKKGV 84 (317)
T ss_pred CCchHHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999999999999976 467999999999999999999999999
Q ss_pred EEEeeeCCccccCCCccccccccccceee-ecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecC
Q 020492 75 KAIWMLDPGIKHEDGYFVYDSGSKIDVWI-QKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDM 153 (325)
Q Consensus 75 k~~~~~~P~i~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~ 153 (325)
|+++|++|+|..++ ..|+++.++++|+ ++.+|+++++.+|+|.+++||||||+|++||.++++++.+.||||||+|+
T Consensus 85 k~~~~v~P~v~~~~--~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~Gvdg~w~D~ 162 (317)
T cd06598 85 KTIVITEPFVLKNS--KNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKLIDQGVTGWWGDL 162 (317)
T ss_pred cEEEEEcCcccCCc--hhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHhhhCCccEEEecC
Confidence 99999999998765 4799999999955 55668899999999999999999999999999999999899999999999
Q ss_pred CCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCccee-eecC
Q 020492 154 NEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAA-TWTG 232 (325)
Q Consensus 154 ~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~-~w~G 232 (325)
|||+.+ |.+..+.+ + .+.++||+|+++++++++|++++..+++|||+++||+++|+|||++ +|+|
T Consensus 163 ~Ep~~~-------~~~~~~~~-----g--~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~~~~~Rs~~~Gsqry~~~~WsG 228 (317)
T cd06598 163 GEPEVH-------PPDMCHHK-----G--KAAEVHNIYGHLWAKSIYEGYQQNYPNERPFILMRAGFAGSQRYGVIPWSG 228 (317)
T ss_pred CCcccc-------CCccccCC-----C--cHhHHhhHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCccccCcCCccCC
Confidence 999864 33332221 1 3578999999999999999999888889999999999999999985 8999
Q ss_pred CCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCC--CChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHH
Q 020492 233 DNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN--ATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLF 310 (325)
Q Consensus 233 D~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~--~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~ 310 (325)
|+.++|++|+.+|+++|++|++|+|+||+|||||.++ +++|||+||+|+|+|+|+||+|+..+ .++|||.|++++++
T Consensus 229 D~~s~W~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~~~EL~~RW~q~g~f~P~~R~H~~~~-~~~ePw~~~~~~~~ 307 (317)
T cd06598 229 DVGRTWDGLKSQPNAALQMSMSGIDYYHSDIGGFAGGDELDPELYTRWFQYGAFDPPFRPHAQNA-IPPEPVFYSIGTKN 307 (317)
T ss_pred CCcCCHHHHHHHHHHHHhhhccCCcccCCCcCCcCCCCCCCHHHHHHHHHhccCCcccccCCCCC-CCCCCCcCChHHHH
Confidence 9999999999999999999999999999999999997 89999999999999999999999975 47899999999999
Q ss_pred HHHHHHHH
Q 020492 311 CSSIVIIA 318 (325)
Q Consensus 311 ~~r~~~~~ 318 (325)
++|++|++
T Consensus 308 ~~r~~~~l 315 (317)
T cd06598 308 INRENIRL 315 (317)
T ss_pred HHHHHHHh
Confidence 99999986
|
CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-83 Score=598.29 Aligned_cols=294 Identities=45% Similarity=0.891 Sum_probs=280.8
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCCh--HHHHHHHHHCCCEEEe
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDP--KSLAADLHLNGFKAIW 78 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~--~~~~~~L~~~G~k~~~ 78 (325)
|||+||||||+|+++|.++++|+++++++++++||||+|++|++|++++++|+||+++|||| ++|+++||++|+|+++
T Consensus 5 lpP~walG~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~ 84 (339)
T cd06602 5 MPPYWALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFPGLKMPEFVDELHANGQHYVP 84 (339)
T ss_pred CCchHHhhhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCccceecccccCCCccHHHHHHHHHHCCCEEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred eeCCccccC---CCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 79 MLDPGIKHE---DGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 79 ~~~P~i~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
|++|+|..+ +.+.+|+++.++++||++.+|+++++.+|+|.+.++|||||+|++||.++++++++ .||||||+|++
T Consensus 85 ~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~ 164 (339)
T cd06602 85 ILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMN 164 (339)
T ss_pred EEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCC
Confidence 999999875 45788999999999999999999999999999999999999999999999998776 79999999999
Q ss_pred CCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCC
Q 020492 155 EPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDN 234 (325)
Q Consensus 155 e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~ 234 (325)
||..+ ..+||+|+++++++++|++++. +++|++++|||+++|+|||+++|+||+
T Consensus 165 Ep~~~-------------------------~~~hN~y~~~~~~~~~~~~~~~-~~~r~~~~sRs~~~G~qry~~~w~GD~ 218 (339)
T cd06602 165 EPSNF-------------------------YDVHNLYGLSEAIATYKALQSI-PGKRPFVISRSTFPGSGRYAGHWLGDN 218 (339)
T ss_pred CCchH-------------------------hhhcchhhHHHHHHHHHHHHhc-CCCCCEEEEecCcccccccceeECCCc
Confidence 98642 2479999999999999999987 789999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHH
Q 020492 235 VSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSI 314 (325)
Q Consensus 235 ~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~ 314 (325)
.|+|++|+.+|+++|++|++|+||||+|||||.+.+++|||+||+|+|+|+|+||+|+..+...++||.|++++++++|+
T Consensus 219 ~s~W~~L~~~i~~~l~~~~sG~~~~~~DigGf~g~~~~EL~~RW~Q~~~f~P~~r~H~~~~~~~~ePw~~~~~~~~~~r~ 298 (339)
T cd06602 219 ASTWEDLRYSIIGMLEFNLFGIPMVGADICGFNGDTTEELCARWMQLGAFYPFSRNHNDIGAIPQEPYVWGPSVADAARK 298 (339)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCCHHHHHHHHHHHhhCceeeccCCCCCCCcCCccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877799999999999999999
Q ss_pred HHHHhh
Q 020492 315 VIIAFF 320 (325)
Q Consensus 315 ~~~~~~ 320 (325)
+++|..
T Consensus 299 ~~~lRy 304 (339)
T cd06602 299 ALNIRY 304 (339)
T ss_pred HHHHHH
Confidence 999863
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of |
| >cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-83 Score=587.97 Aligned_cols=291 Identities=33% Similarity=0.668 Sum_probs=259.0
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||||||+|.++++|+++++++|+++||||+|++|++|+.++++|+||+++||||++|+++||++|+|+++++
T Consensus 5 mpP~WalG~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~Ft~d~~~FPdp~~mv~~L~~~G~klv~~i 84 (332)
T cd06601 5 LKPRYALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFPNPKEMFDNLHNKGLKCSTNI 84 (332)
T ss_pred CCchHHhhhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCceeecCCCCCCHHHHHHHHHHCCCeEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFK 160 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~ 160 (325)
+|+|.. +..|++.++++||+||+|++||.++++.+.+.|||++|+|+|||+.|+
T Consensus 85 ~P~i~~--------------------------g~~~~~~~~~pDftnp~ar~wW~~~~~~l~~~Gv~~~W~DmnEp~~~~ 138 (332)
T cd06601 85 TPVISY--------------------------GGGLGSPGLYPDLGRPDVREWWGNQYKYLFDIGLEFVWQDMTTPAIMP 138 (332)
T ss_pred cCceec--------------------------CccCCCCceeeCCCCHHHHHHHHHHHHHHHhCCCceeecCCCCccccc
Confidence 999871 234566788999999999999999999999999999999999999886
Q ss_pred CCC--CCCCCCCccCCCC-C-CCcccccccccchhHHHHHHHHHHHHHhhc--CCCCcEEEEccccCCCCcceeeecCCC
Q 020492 161 SVT--KTMPESNIHRGDD-E-IGGCQNHSYYHNVYGMLMARSTYEGMKLAD--KDKRPFVLTRAGFIGSQRYAATWTGDN 234 (325)
Q Consensus 161 ~~~--~~~P~~~~~~~~~-~-~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~--~~~r~~~~srs~~~G~qr~~~~w~GD~ 234 (325)
... .++|.+..+.... . ..+...|.++||+|+++++++++|++++.. +++||||+|||+|+|+|||+++|+||+
T Consensus 139 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGsqrY~~~WsGDn 218 (332)
T cd06601 139 SYGDMKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGMQRFAGLWTGDN 218 (332)
T ss_pred CCCccCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCccCCcCceeCCCc
Confidence 421 3466654432110 0 001124788999999999999999998764 689999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHccccCCCcccccCCCCCCC----------CChhHHHHHHHhhcccccccccCCCC--CCCCCc-
Q 020492 235 VSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN----------ATPRLFGRWMGIGAMFPFCRGHTESD--AIDHEP- 301 (325)
Q Consensus 235 ~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~----------~~~eL~~RW~q~~af~P~~r~h~~~~--~~~~~P- 301 (325)
.|+|+.|+.+|+++|++||||+||||+|||||.+. +++|||+||+|+|||+|+||+|+..+ +..+||
T Consensus 219 ~stW~~L~~si~~~L~~~lsGip~~g~DIGGF~g~~~~~~~~~~~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~~~ep~ 298 (332)
T cd06601 219 SSSWDFLQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPELLIRWYQAGFLLPWFRNHYDRKIRQKFQEPA 298 (332)
T ss_pred ccCHHHHHHHHHHHHHhhhcCCCccCCccCCcCCCCcccccccCCCCHHHHHHHHHHhcCCceeccCCCCccCcccCCcc
Confidence 99999999999999999999999999999999986 57999999999999999999999754 467788
Q ss_pred ----------------cccChhhHHHHHHHHHH
Q 020492 302 ----------------WSFGEEVLFCSSIVIIA 318 (325)
Q Consensus 302 ----------------w~~~~~~~~~~r~~~~~ 318 (325)
|.+ +++++|+|++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~i~~ 330 (332)
T cd06601 299 KYFQEPYAHLIDYEQLYLY-ENVPEICRKYVEL 330 (332)
T ss_pred ccccccccccccccccccc-HHHHHHHHHHHHh
Confidence 555 9999999999986
|
GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes. |
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=586.36 Aligned_cols=298 Identities=31% Similarity=0.607 Sum_probs=279.6
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCce--eeeecCCCCCChHHHHHHHHHCCCEEEe
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFR--CFTFDKERFPDPKSLAADLHLNGFKAIW 78 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~--~f~~d~~~FPd~~~~~~~L~~~G~k~~~ 78 (325)
|||+||||||+|+++|.++++|+++++++++++||||+++||++|+.+.+ +|+||+++|||+++|+++||++|+|+++
T Consensus 5 l~P~wa~G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~~~i~~l~~~G~~~~~ 84 (308)
T cd06593 5 LPPAWSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPEGMLSRLKEKGFKVCL 84 (308)
T ss_pred CCchHHHHHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHHHHHHHHHHCCCeEEE
Confidence 79999999999999999999999999999999999999999999998765 9999999999999999999999999999
Q ss_pred eeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCc
Q 020492 79 MLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAV 158 (325)
Q Consensus 79 ~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~ 158 (325)
|++|+|..++. +|+++.++++|+++.+|+++.+.+|+|.++++|||||+|++||.++++++.+.||||||+|++|+.
T Consensus 85 ~~~P~i~~~~~--~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~Gid~~~~D~~e~~- 161 (308)
T cd06593 85 WINPYIAQKSP--LFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLDMGVDCFKTDFGERI- 161 (308)
T ss_pred EecCCCCCCch--hHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHHhCCcEEecCCCCCC-
Confidence 99999987664 899999999999999999999999999999999999999999999999999999999999999973
Q ss_pred cCCCCCCCCCCCc-cCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCC
Q 020492 159 FKSVTKTMPESNI-HRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSN 237 (325)
Q Consensus 159 ~~~~~~~~P~~~~-~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~ 237 (325)
|.+.. +.|. .+.++||+|+++++++++|++++..+.+|+++++||+++|+|||+++|+||+.++
T Consensus 162 --------p~~~~~~~g~-------~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~~~Gsqry~~~w~GD~~s~ 226 (308)
T cd06593 162 --------PTDVVYYDGS-------DGEKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSAWAGSQKYPVHWGGDCEST 226 (308)
T ss_pred --------CccccccCCC-------CcceeeeHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccccccCCCEECCCcccC
Confidence 44433 2221 3578999999999999999999988788999999999999999999999999999
Q ss_pred chHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHH
Q 020492 238 WEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVII 317 (325)
Q Consensus 238 W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~ 317 (325)
|++|+.+|+++|++|++|+|++|+|||||.+++++|||+||+|+|||+|+||+|+.. .++||.|++++++++|++++
T Consensus 227 w~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~EL~~RW~q~gaf~P~~r~h~~~---~~~Pw~~~~~~~~~~r~~~~ 303 (308)
T cd06593 227 FEGMAESLRGGLSLGLSGFGFWSHDIGGFEGTPPPDLYKRWAQFGLLSSHSRLHGSG---YREPWEYGEEAVDVVRKFAK 303 (308)
T ss_pred HHHHHHHHHHHHhccccCCceecCccCCcCCCCCHHHHHHHHHhCcCCcccccCCCC---CCCCcccChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999874 89999999999999999998
Q ss_pred Hh
Q 020492 318 AF 319 (325)
Q Consensus 318 ~~ 319 (325)
+-
T Consensus 304 lR 305 (308)
T cd06593 304 LK 305 (308)
T ss_pred HH
Confidence 74
|
YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. |
| >cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-81 Score=580.34 Aligned_cols=300 Identities=32% Similarity=0.544 Sum_probs=269.2
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCce--eeeecCCCCCChHHHHHHHHHCCCEEEe
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFR--CFTFDKERFPDPKSLAADLHLNGFKAIW 78 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~--~f~~d~~~FPd~~~~~~~L~~~G~k~~~ 78 (325)
|||+||||||+|+++|.++++|+++++++++++||||+|++|.+|+.+.+ +|+||+++||||++|+++||++|+|+++
T Consensus 5 m~P~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~ 84 (319)
T cd06591 5 MMPKWAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNAELMI 84 (319)
T ss_pred CCchHHHHHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCCEEEE
Confidence 89999999999999999999999999999999999999999999988777 9999999999999999999999999999
Q ss_pred eeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHh-hhhCCccEEEecCCCCC
Q 020492 79 MLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKD-FIYNGVDGIWNDMNEPA 157 (325)
Q Consensus 79 ~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~-~~~~Gvdg~~~D~~e~~ 157 (325)
+++|+|..++ ..|++++++++++++++|.++. .+|+|.++++|||||+|++||.+++++ +.+.||||||+|+|||+
T Consensus 85 ~i~P~v~~~~--~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~Ep~ 161 (319)
T cd06591 85 SIWPTFGPET--ENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAEPE 161 (319)
T ss_pred EecCCcCCCC--hhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCCCC
Confidence 9999998754 5899999999999999988876 899999999999999999999888765 55799999999999998
Q ss_pred ccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCccee-eecCCCCC
Q 020492 158 VFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAA-TWTGDNVS 236 (325)
Q Consensus 158 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~-~w~GD~~s 236 (325)
.++.... ..+... .. ..+.++||+|+++++|+++|++++..+++|||+++||+++|+|||++ +|+||+.|
T Consensus 162 ~~~~~~~--~~~~~~----~~---~~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~f~~sRs~~~Gsqry~~~~W~GD~~s 232 (319)
T cd06591 162 YSVYDFG--LDNYRY----HL---GPGLEVGNAYPLMHAKGIYEGQRAAGDEKRVVILTRSAWAGSQRYGALVWSGDIDS 232 (319)
T ss_pred ccCCccc--ccCccc----CC---CCchhhhhhhHHHHHHHHHHHHHHhCCCCCceEEEeccccccccccCceeCCCccc
Confidence 7542110 000000 01 13578999999999999999999887789999999999999999985 99999999
Q ss_pred CchHHHHHHHHHHHccccCCCcccccCCCCCCCCC---------hhHHHHHHHhhcccccccccCCCCC-CCCCccccCh
Q 020492 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNAT---------PRLFGRWMGIGAMFPFCRGHTESDA-IDHEPWSFGE 306 (325)
Q Consensus 237 ~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~---------~eL~~RW~q~~af~P~~r~h~~~~~-~~~~Pw~~~~ 306 (325)
+|++|+.+|+.+|++|++|+|++|+|||||.++.+ +|||+||+|+|||+|+||+|+.... ..+|||.|++
T Consensus 233 ~w~~L~~~i~~~l~~glsG~~~~g~DiGGF~~~~~~~~~~~~~~~EL~~RW~q~gaf~P~~R~H~~~~~~~~~ePw~~g~ 312 (319)
T cd06591 233 SWETLRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQFGAFCPVMRSHGTREPREINEFWSYGE 312 (319)
T ss_pred cHHHHHHHHHHHHHHhhcCCccccCCcCCcCCCCccccccCCccHHHHHHHHHHhcCccccccCCCCCCCCCCcCcCCCh
Confidence 99999999999999999999999999999998755 8999999999999999999998653 3579999999
Q ss_pred hhHHHH
Q 020492 307 EVLFCS 312 (325)
Q Consensus 307 ~~~~~~ 312 (325)
++++|+
T Consensus 313 e~~~~~ 318 (319)
T cd06591 313 EVYDIL 318 (319)
T ss_pred HHHHhh
Confidence 999875
|
XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes. |
| >cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-81 Score=576.94 Aligned_cols=299 Identities=35% Similarity=0.652 Sum_probs=265.6
Q ss_pred CCCccchhhhhhcCCCCC-----HHHHHHHHHHHHhcCCCceEEEEecccCCC----ceeeeecCCCCCChHHHHHHHHH
Q 020492 1 MPPKWSLGYHQCRWSYDS-----DKRVREICRTFREKGIPCDVIWMDIDYMDG----FRCFTFDKERFPDPKSLAADLHL 71 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~-----~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~----~~~f~~d~~~FPd~~~~~~~L~~ 71 (325)
|||+||||||+|+++|.+ +++|+++++++|+++||+|+|+||++|+.. +.+|+||+++||||++|+++||+
T Consensus 5 mpP~walG~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~ 84 (317)
T cd06599 5 MVPRWSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDPAAFVAKFHE 84 (317)
T ss_pred CCchHHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCHHHHHHHHHH
Confidence 899999999999999988 899999999999999999999999999864 56899999999999999999999
Q ss_pred CCCEEEeeeCCccccCCCccccccccccceeeecCCCC-ceeeeecCCCccCCCCCChHHHHHHHHHHH-hhhhCCccEE
Q 020492 72 NGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGT-PFIGEVWPGPCVFPDYTQSKVRSWWGSLVK-DFIYNGVDGI 149 (325)
Q Consensus 72 ~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~-~~~~~Gvdg~ 149 (325)
+|+|+++|++|+|..++ ..|+++.++++||++.+|. ++++.+|+|.++++|||||+|++||.++++ .+.+.|||||
T Consensus 85 ~g~k~~~~i~P~i~~~~--~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~ 162 (317)
T cd06599 85 RGIRLAPNIKPGLLQDH--PRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDST 162 (317)
T ss_pred CCCEEEEEeCCcccCCC--HHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHhcCCCcEE
Confidence 99999999999998765 4799999999999998765 688999999999999999999999999995 5667999999
Q ss_pred EecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceee
Q 020492 150 WNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAAT 229 (325)
Q Consensus 150 ~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~ 229 (325)
|+|+|||+.+ +.+..+... +.++ .+..+||+|++++++++|+++++..+++|||+++||+++|+|||+++
T Consensus 163 w~D~~E~~~~-------~~~~~~~~~-g~~~--~~~~~~n~y~~l~~~a~~~~~~~~~~~~r~f~ltRs~~~G~qry~~~ 232 (317)
T cd06599 163 WNDNNEYEIW-------DDDAVCDGF-GKPG--TIGELRPVQPNLMARASHEAQAEHYPNRRPYIVSRSGFAGIQRYAQT 232 (317)
T ss_pred EecCCCCccC-------CCcceecCC-CCcc--chhhcccchHHHHHHHHHHHHHHhCCCCCcEEEEcCCcccccCCcCe
Confidence 9999998643 222222111 1111 23458999999999999999998878899999999999999999999
Q ss_pred ecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCC-CChhHHHHHHHhhcccccccccCCCC-CCCCCccccChh
Q 020492 230 WTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN-ATPRLFGRWMGIGAMFPFCRGHTESD-AIDHEPWSFGEE 307 (325)
Q Consensus 230 w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~-~~~eL~~RW~q~~af~P~~r~h~~~~-~~~~~Pw~~~~~ 307 (325)
|+||+.++|++|+.+|+.+|++|++|+||||+|||||.++ +++|||+||+|+|+|+|+||+|+..+ ...||||.|+ +
T Consensus 233 WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIGGF~~~~~~~ELy~RW~Q~g~F~P~~R~H~~~~~~~~~ePw~f~-~ 311 (317)
T cd06599 233 WSGDNRTSWKTLRYNIAMGLGMGLSGVANIGHDIGGFAGPAPEPELFVRWVQNGIFQPRFCIHSWNTDNTVTEPWMYP-E 311 (317)
T ss_pred eCCCcccCHHHHHHHHHHHHhhhccCCcccccccCccCCCCCCHHHHHHHHHHccCCHhhhcccCCCCCCCcCCeecc-c
Confidence 9999999999999999999999999999999999999986 79999999999999999999999764 3689999995 5
Q ss_pred hHHHH
Q 020492 308 VLFCS 312 (325)
Q Consensus 308 ~~~~~ 312 (325)
+.+++
T Consensus 312 ~~~~~ 316 (317)
T cd06599 312 VTDYI 316 (317)
T ss_pred chhhc
Confidence 55544
|
The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-81 Score=590.77 Aligned_cols=312 Identities=44% Similarity=0.861 Sum_probs=297.5
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||.+|+|||||||.|.++++|.++-++|.+++||+|+||+|..+.++.+.||||+.+||+|+.|+++|.++|.|++.+|
T Consensus 353 LPplFsiGYHQcRWNY~DE~DV~~Vd~~FDehdiP~DviWLDIEhtdgKrYFTWDk~~FP~P~~Ml~kLa~kgRklV~Iv 432 (915)
T KOG1066|consen 353 LPPLFSIGYHQCRWNYNDEEDVLTVDQGFDEHDIPYDVIWLDIEHTDGKRYFTWDKHKFPNPKDMLKKLASKGRKLVTIV 432 (915)
T ss_pred CCchhhcchhhccccccchhhhhhhhcCccccCCccceEEEeeeecCCceeEeeccccCCCHHHHHHHHHhcCCceEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCc---cEEEecCCCCC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGV---DGIWNDMNEPA 157 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gv---dg~~~D~~e~~ 157 (325)
+|.|+.+++|++++++.+.+++||+.+|+.|.|.||||.+.+|||.||++|+||+++..--.-.|. -.+|+|||||+
T Consensus 433 DPHIKkD~~Y~v~ke~~~~gy~VKd~~G~DyeG~CWPG~S~yiDf~nP~~r~wW~~~fafd~y~g~t~nl~iWNDMNEPS 512 (915)
T KOG1066|consen 433 DPHIKKDDGYFVHKEAKDKGYYVKDRDGSDYEGWCWPGSSSYIDFINPEARKWWKSQFAFDRYEGSTPNLFIWNDMNEPS 512 (915)
T ss_pred CcccccCCCeEEhHHhhhCCeEEEecCCCcccccccCCCcccccccCHHHHHHHhhhcccccccCCCCceEEeccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999862111343 36899999999
Q ss_pred ccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcC-CCCcEEEEccccCCCCcceeeecCCCCC
Q 020492 158 VFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADK-DKRPFVLTRAGFIGSQRYAATWTGDNVS 236 (325)
Q Consensus 158 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~-~~r~~~~srs~~~G~qr~~~~w~GD~~s 236 (325)
.|...+.++|.++.|.|.. .|+++||+||++...++++||.++.+ ..|||++|||.|+|+||++++|+|||.+
T Consensus 513 VFnGPEiTm~kDaiHyGg~------EHRdVHNiYG~~~h~aT~dGl~~R~~g~~RPFvLsRafFaGsQR~aAiWTGDN~A 586 (915)
T KOG1066|consen 513 VFNGPEITMPKDAIHYGGW------EHRDVHNIYGLMVHMATFDGLIARSGGKERPFVLSRAFFAGSQRTAAIWTGDNTA 586 (915)
T ss_pred ccCCCccccchhhhhcCCe------eechhhhhhceeeeehhhhhhhhhcCCCcCceEEEeccccCccceeeeeccCCcc
Confidence 9999999999999998642 48999999999999999999998765 6899999999999999999999999999
Q ss_pred CchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHH
Q 020492 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI 316 (325)
Q Consensus 237 ~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~ 316 (325)
+|+.||.+|+++|+.|++|+||.|.|||||+|+|++||++||+|.|||.|+||.|...++..||||.|++...+++|+||
T Consensus 587 ~W~HLkiSiPM~Lsl~iaG~~F~GADVgGFFgNPd~ELlvRWYQ~gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal 666 (915)
T KOG1066|consen 587 DWDHLKISIPMVLSLGIAGMPFVGADVGGFFGNPDPELLVRWYQTGAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDAL 666 (915)
T ss_pred chhhheeecceeEecccccceecccccccccCCCCHHHHHHHHHhcccchhhhhhccccccccCccccCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q 020492 317 IA 318 (325)
Q Consensus 317 ~~ 318 (325)
++
T Consensus 667 ~~ 668 (915)
T KOG1066|consen 667 RT 668 (915)
T ss_pred HH
Confidence 86
|
|
| >cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-79 Score=565.33 Aligned_cols=293 Identities=26% Similarity=0.469 Sum_probs=257.6
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC----------------C-----ceeeeecC-CC
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD----------------G-----FRCFTFDK-ER 58 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----------------~-----~~~f~~d~-~~ 58 (325)
|||+|||||||||++|.++++|+++++++++++||||+|+|| +|+. + +.+++||+ ++
T Consensus 5 lpP~walG~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD-~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~~~~ 83 (340)
T cd06597 5 LLPKWAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIE-QWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPVEGR 83 (340)
T ss_pred CCchHHhhhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEe-cccCcceeeeeccchhcccccCCcceecccccCcccc
Confidence 799999999999999999999999999999999999999998 5653 1 34556664 79
Q ss_pred CCChHHHHHHHHHCCCEEEeeeCCccccCCC-----ccccccccccceeeecCCCCceee-eecCCCccCCCCCChHHHH
Q 020492 59 FPDPKSLAADLHLNGFKAIWMLDPGIKHEDG-----YFVYDSGSKIDVWIQKADGTPFIG-EVWPGPCVFPDYTQSKVRS 132 (325)
Q Consensus 59 FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~-~~w~g~~~~~Df~~p~a~~ 132 (325)
||||++||++||++|+|+++|++|+|..... ...|+++.++++|+++.+|+++++ .+|+|.++++|||||+|++
T Consensus 84 FPdp~~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp~a~~ 163 (340)
T cd06597 84 WPNPKGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPEAAQ 163 (340)
T ss_pred CCCHHHHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCCHHHHH
Confidence 9999999999999999999999999975321 124668999999999999998875 6899999999999999999
Q ss_pred HHHHHHHhhh-hCCccEEEecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCC
Q 020492 133 WWGSLVKDFI-YNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKR 211 (325)
Q Consensus 133 w~~~~~~~~~-~~Gvdg~~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r 211 (325)
||.+++++++ +.||||||+|++|+. + +.+..+.. + ..+..+||+|+++++++++|++++. ++|
T Consensus 164 Ww~~~~~~~~~~~Gidg~w~D~~E~~-~-------~~~~~~~~-----g-~~~~~~hN~y~~~~~~~~~e~~~~~--~~r 227 (340)
T cd06597 164 WWMEKRRYLVDELGIDGFKTDGGEHV-W-------GRDLHFRD-----G-RRGDEMRNTYPNHYVRAYNDFLRRA--KKD 227 (340)
T ss_pred HHHHHHHHHHHhcCCcEEEecCCCcc-C-------CCCceecC-----C-CcHHHhhcccHHHHHHHHHHHHHhc--cCC
Confidence 9999999988 589999999999975 2 12222211 1 1356789999999999999998775 789
Q ss_pred cEEEEccccCCCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCC-CChhHHHHHHHhhcccccccc
Q 020492 212 PFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN-ATPRLFGRWMGIGAMFPFCRG 290 (325)
Q Consensus 212 ~~~~srs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~-~~~eL~~RW~q~~af~P~~r~ 290 (325)
+|+++||+++|+|||+++|+||+.|+|++|+.+|+++|++|++|+||+|+|||||.++ +++|||+||+|+|||+|+||+
T Consensus 228 ~filtRs~~~Gsqry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIgGF~g~~~~~EL~~RW~Q~g~F~P~~R~ 307 (340)
T cd06597 228 GVTFSRAGYTGAQAHGIFWAGDENSTFGAFRWSVFAGLSASASGIPYWGWDLAGFTGDVPTAELYVRSTAMAAFVPIMQY 307 (340)
T ss_pred cEEEEecccCccCCCcceecCCCCCCHHHHHHHHHHHHHHhhcCCCcCCCccCCcCCCCCCHHHHHHHHHHhhcchhhhh
Confidence 9999999999999999999999999999999999999999999999999999999987 799999999999999999999
Q ss_pred cCCCCC-----CCCCccccChhhHH
Q 020492 291 HTESDA-----IDHEPWSFGEEVLF 310 (325)
Q Consensus 291 h~~~~~-----~~~~Pw~~~~~~~~ 310 (325)
|+..+. ..||||.|++++.+
T Consensus 308 H~~~~~~~~~~~~~epw~~~~~~~~ 332 (340)
T cd06597 308 HSEFNGHSSPNEDRTPWNIAERTGE 332 (340)
T ss_pred ccCCCCCCcCcCCccCCcccCcCCC
Confidence 998643 58999999987654
|
CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-78 Score=559.68 Aligned_cols=293 Identities=25% Similarity=0.492 Sum_probs=264.3
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCC---------ceeeeecCCCCCChHHHHHHHHH
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDG---------FRCFTFDKERFPDPKSLAADLHL 71 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~---------~~~f~~d~~~FPd~~~~~~~L~~ 71 (325)
|||+||||+|+|++.+ ++++|+++++++++++||||+|++| +|+.. +.+|+||+++||||++|+++||+
T Consensus 5 ~~P~wa~G~~~~~~~~-s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g~~~~~~f~~d~~~FPdp~~mi~~Lh~ 82 (317)
T cd06594 5 ELPDWAYGGAILGLQG-GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFGDRLWWNWEWDPERYPGLDELIEELKA 82 (317)
T ss_pred CCchhhhCcEEeeeeC-CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccccceeeeeeEEChhhCCCHHHHHHHHHH
Confidence 7999999999999855 9999999999999999999999999 78642 23689999999999999999999
Q ss_pred CCCEEEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhh-hhCCccEEE
Q 020492 72 NGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF-IYNGVDGIW 150 (325)
Q Consensus 72 ~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~-~~~Gvdg~~ 150 (325)
+|+|+++|++|+|..++.. .|+++.++++|+++++|+++++.+|+|.++++|||||+|++||.++++++ .+.||||||
T Consensus 83 ~G~~~~~~i~P~v~~~~~~-~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w 161 (317)
T cd06594 83 RGIRVLTYINPYLADDGPL-YYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWM 161 (317)
T ss_pred CCCEEEEEecCceecCCch-hHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEE
Confidence 9999999999999886542 26999999999999999999999999999999999999999999999987 679999999
Q ss_pred ecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCccee-e
Q 020492 151 NDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAA-T 229 (325)
Q Consensus 151 ~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~-~ 229 (325)
+|+||+. |.+..+.. | ..+.++||+|++++++++++++++..+++|||++|||+|+|+|||++ +
T Consensus 162 ~D~~E~~---------p~d~~~~~-----g-~~~~~~hN~y~~~~~~~~~~~~~~~~~~~r~fvltRs~~~Gsqry~~~~ 226 (317)
T cd06594 162 ADFGEYL---------PFDAVLHS-----G-EDAATMHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFTGSQKYSTLF 226 (317)
T ss_pred ecCCCCC---------CCcceecC-----C-CCHHHHhhHHHHHHHHHHHHHHHHhccCCCeEEEEcccccccccccccc
Confidence 9999963 33333221 1 13678999999999999999999887789999999999999999985 8
Q ss_pred ecCCCCCCch---HHHHHHHHHHHccccCCCcccccCCCCCC----CCChhHHHHHHHhhcccccccccCCCCCCCCCcc
Q 020492 230 WTGDNVSNWE---HLHMSISMVLQLGLSGQPFSGPDIGGFDG----NATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPW 302 (325)
Q Consensus 230 w~GD~~s~W~---~L~~~i~~~l~~~l~G~~~~g~DigGf~~----~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw 302 (325)
|+||+.++|+ +|+.+|+++|++|++|+||+|+|||||.+ .+++|||+||+|+|||+|+||+|+......++||
T Consensus 227 WsGD~~s~W~~~~~L~~~i~~~L~~~lsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~ 306 (317)
T cd06594 227 WAGDQMVSWDAHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNGYVRTEELLLRWAEMAAFTPVMRTHEGNRPDDNWQF 306 (317)
T ss_pred cCCCCCCCCcCcccHHHHHHHHhhccccCCCcccCccCCCcCCCCCCCCHHHHHHHHHHhccccceecCCCCCCCCCccc
Confidence 9999999998 79999999999999999999999999975 4799999999999999999999998877789999
Q ss_pred ccChhhHHH
Q 020492 303 SFGEEVLFC 311 (325)
Q Consensus 303 ~~~~~~~~~ 311 (325)
.+++++.+.
T Consensus 307 ~~~~~~~~~ 315 (317)
T cd06594 307 YSDDETLRH 315 (317)
T ss_pred ccChHHHHh
Confidence 998887654
|
Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. |
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=602.05 Aligned_cols=300 Identities=25% Similarity=0.501 Sum_probs=277.4
Q ss_pred CCCccchhhhhhcC-CC-CCHHHHHHHHHHHHhcCCCceEEEEecccCCC--ceeeeecCCCCCChHHHHHHHHHCCCEE
Q 020492 1 MPPKWSLGYHQCRW-SY-DSDKRVREICRTFREKGIPCDVIWMDIDYMDG--FRCFTFDKERFPDPKSLAADLHLNGFKA 76 (325)
Q Consensus 1 lpP~walG~~~s~~-~y-~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~--~~~f~~d~~~FPd~~~~~~~L~~~G~k~ 76 (325)
|||+||||||+|+. .+ .++++|++++++|++++||||+|++|++|+++ +.+|+||+++||||++|+++||++|+|+
T Consensus 262 lpP~WalG~w~s~~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~~w~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~ 341 (665)
T PRK10658 262 LPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERDLPLHVFHFDCFWMKEFQWCDFEWDPRTFPDPEGMLKRLKAKGLKI 341 (665)
T ss_pred CCchhhhheeeecccccCCCHHHHHHHHHHHHHcCCCceEEEEchhhhcCCceeeeEEChhhCCCHHHHHHHHHHCCCEE
Confidence 79999999999983 32 36889999999999999999999999999986 5799999999999999999999999999
Q ss_pred EeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCC
Q 020492 77 IWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEP 156 (325)
Q Consensus 77 ~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~ 156 (325)
++|++|+|..++ .+|++++++++|+++++|+++++..|+|.++++|||||+|++||.++++++++.||||||+|++|+
T Consensus 342 ~~~i~P~i~~~s--~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l~d~Gvdgfw~D~gE~ 419 (665)
T PRK10658 342 CVWINPYIAQKS--PLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIVDFTNPDACKWYADKLKGLLDMGVDCFKTDFGER 419 (665)
T ss_pred EEeccCCcCCCc--hHHHHHHHCCeEEECCCCCEeeeeecCCCceeecCCCHHHHHHHHHHHHHHHhcCCcEEEecCCce
Confidence 999999998754 589999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCC
Q 020492 157 AVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236 (325)
Q Consensus 157 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s 236 (325)
+|.+..+.. | ..+..+||+|++++++++||++++..+.+|+++++||+++|+|||+++|+||+.|
T Consensus 420 ---------~p~d~~~~~-----G-~~~~~~hN~Y~~l~~ka~~e~l~~~~~~~r~~i~tRs~~aGsQry~~~WsGD~~s 484 (665)
T PRK10658 420 ---------IPTDVVWFD-----G-SDPQKMHNYYTYLYNKTVFDVLKETRGEGEAVLFARSATVGGQQFPVHWGGDCYS 484 (665)
T ss_pred ---------eeccceecC-----C-CcHHHhcchhHHHHHHHHHHHHHHhcCCCceEEEEecccCCCCCCCCEECCCCCC
Confidence 344443321 1 1357899999999999999999998778999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHH
Q 020492 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI 316 (325)
Q Consensus 237 ~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~ 316 (325)
+|++|+.+|+++|++|+||+||||+|||||.+.+++|||+||+|+|+|+|+||+|+.. ..|+||.|++++.+++|+++
T Consensus 485 tw~~l~~si~~~Ls~glsG~~~~g~DIGGF~g~~~~ELy~RW~Q~g~f~P~~R~Hg~~--~~~ePW~fg~e~~~i~r~~i 562 (665)
T PRK10658 485 NYESMAESLRGGLSLGLSGFGFWSHDIGGFENTATADVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDEEAVDVVRFFT 562 (665)
T ss_pred CHHHHHHHHHHHHHHHhcCCccccCccCCCCCCCCHHHHHHHHHhcccChhhcccCCC--CCcCCcccCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999875 46999999999999999999
Q ss_pred HHh
Q 020492 317 IAF 319 (325)
Q Consensus 317 ~~~ 319 (325)
+|-
T Consensus 563 ~lR 565 (665)
T PRK10658 563 KLK 565 (665)
T ss_pred HHH
Confidence 964
|
|
| >COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-77 Score=599.31 Aligned_cols=302 Identities=43% Similarity=0.844 Sum_probs=283.4
Q ss_pred CCCccchh-hhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecc-cCCCceeeeecCCCCCChHHHHHHHHHCCCEEEe
Q 020492 1 MPPKWSLG-YHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDID-YMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIW 78 (325)
Q Consensus 1 lpP~walG-~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~-w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~ 78 (325)
|||+|||| +|+|++.|.++++|.++++.+++++||+|+|++|++ |.+.+++|+||+.+||||++|+++||++|+|+++
T Consensus 260 l~P~Wa~G~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD~~~~~~~~~~F~wd~~~FP~pk~mi~~l~~~Gikl~~ 339 (772)
T COG1501 260 LPPKWALGWLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVLDIDFWMDNWGDFTWDPDRFPDPKQMIAELHEKGIKLIV 339 (772)
T ss_pred CCCceecCCCceeccccccHHHHHHHHhhcccccCcceEEEEeehhhhccccceEECcccCCCHHHHHHHHHhcCceEEE
Confidence 79999999 999999999999999999999999999999999997 9889999999999999999999999999999999
Q ss_pred eeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHH-HHHhhhhCCccEEEecCCCCC
Q 020492 79 MLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS-LVKDFIYNGVDGIWNDMNEPA 157 (325)
Q Consensus 79 ~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~-~~~~~~~~Gvdg~~~D~~e~~ 157 (325)
+++|.|..+. ++|+++.++|+|+++++|.++.+..|++.++++|||||+|++||.+ ..+.+.+.||||||+|+|||.
T Consensus 340 ~i~P~i~~d~--~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~ 417 (772)
T COG1501 340 IINPYIKQDS--PLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPE 417 (772)
T ss_pred EeccccccCC--chHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCCc
Confidence 9999999987 5899999999999999999999999999999999999999999994 556788999999999999998
Q ss_pred ccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCC
Q 020492 158 VFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSN 237 (325)
Q Consensus 158 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~ 237 (325)
.++.. ..+.+ ..+..+||+|++++++++|+++++..+++|||+++||+++|+|||+++|+||+.++
T Consensus 418 ~~~~~-------~~~~g-------~~~~~~~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~aG~Q~~~~~WsGD~~s~ 483 (772)
T COG1501 418 PFDGD-------GFGNG-------IDHEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGSQRYAAHWSGDNRSS 483 (772)
T ss_pred ccccc-------ccccc-------cCHHHHhcchhHHHHHHHHHHHHhhcCCCceEEEEecccccceeccceeCCccccc
Confidence 76531 11111 24678999999999999999999988899999999999999999999999999999
Q ss_pred chHHHHHHHHHHHccccCCCcccccCCCCCC--CCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHH
Q 020492 238 WEHLHMSISMVLQLGLSGQPFSGPDIGGFDG--NATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIV 315 (325)
Q Consensus 238 W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~--~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~ 315 (325)
|++|+.+|+++|++|+||+|+||+|||||.| .+++|||+||+|+|+|+|+||+|+. .+.+|+||.|++++.+++|++
T Consensus 484 wd~l~~si~~~Ls~~~sGi~~wg~DiGGF~g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~ 562 (772)
T COG1501 484 WDSLRESIPAGLSLSLSGIPFWGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREY 562 (772)
T ss_pred hHHHHhhHHhhhchhccCCccccccccccCCCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHH
Confidence 9999999999999999999999999999999 6799999999999999999999998 457999999999999999999
Q ss_pred HHHh
Q 020492 316 IIAF 319 (325)
Q Consensus 316 ~~~~ 319 (325)
|++.
T Consensus 563 ~~lR 566 (772)
T COG1501 563 IQLR 566 (772)
T ss_pred HHHH
Confidence 9875
|
|
| >PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-76 Score=570.80 Aligned_cols=313 Identities=42% Similarity=0.893 Sum_probs=274.8
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||+|+|+++|.++++|+++++++++++||+|++++|++|+.+.++|+||+++|||+++|++.||++|+|+++|+
T Consensus 24 ~pP~walG~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~~f~~d~~~FPd~~~~~~~l~~~G~~~~~~~ 103 (441)
T PF01055_consen 24 LPPRWALGFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYGDFTWDPERFPDPKQMIDELHDQGIKVVLWV 103 (441)
T ss_dssp ---GGGGSEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTBTT-B-TTTTTTHHHHHHHHHHTT-EEEEEE
T ss_pred CCchhhhceEeecCcCCCHHHHHHHHHHHHHcCCCccceeccccccccccccccccccccchHHHHHhHhhCCcEEEEEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCC-ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhC-CccEEEecCCCCCc
Q 020492 81 DPGIKHEDG-YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAV 158 (325)
Q Consensus 81 ~P~i~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~-Gvdg~~~D~~e~~~ 158 (325)
+|+|..++. +..|+++.++++++++++|+++++.+|+|.++++||+||++++||.++++++++. ||||||+|++||..
T Consensus 104 ~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~ 183 (441)
T PF01055_consen 104 HPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWWKEQLKELLDDYGVDGWWLDFGEPSS 183 (441)
T ss_dssp ESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHHHHHHHHHHTTST-SEEEEESTTTBS
T ss_pred ecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHHHHHHHHHHhccCCceEEeecCCccc
Confidence 999998876 6789999999999999999999999999999999999999999999999999986 99999999999987
Q ss_pred cCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCc
Q 020492 159 FKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNW 238 (325)
Q Consensus 159 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W 238 (325)
+. ...++|.+..+.+. ..+..+||+|++++++++++++++..+++|+++++||+++|+|||+++|+||+.++|
T Consensus 184 ~~-~~~~~~~~~~~~~~------~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~qr~~~~w~GD~~s~w 256 (441)
T PF01055_consen 184 FD-SNNTLPEDAVHHDG------YSGYEMHNLYGLLYAKATYEALREIDPNKRPFIFSRSGWAGSQRYGGHWSGDNSSSW 256 (441)
T ss_dssp ST-TTBSBCTTEECTTE------CEHHHHGGGHHHHHHHHHHHHHHHHSTTSC-EEEESSEETTGGGTCEEEECSSBSSH
T ss_pred cc-ccccCcccceecCC------CCchheeccccccchhhhhhhhhhccCCCCcceeecccCCCCCccceeecccccccH
Confidence 64 33345665554321 146789999999999999999998778899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHHH
Q 020492 239 EHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIA 318 (325)
Q Consensus 239 ~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~ 318 (325)
++|+.+|.++|++|++|+|++|+|||||.+.+++|||+||+|+|+|+|+||+|+..+...++||.|++++++++|+++++
T Consensus 257 ~~L~~~i~~~l~~~~~G~~~~g~DigG~~~~~~~eL~~RW~q~~~f~p~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~l 336 (441)
T PF01055_consen 257 DGLRSSIPAMLNMGLSGYPFWGSDIGGFSGDPDEELYIRWYQFGAFSPLFRNHGNKPSNPREPWSFGDEAEDIFRRAIRL 336 (441)
T ss_dssp HHHHHHHHHHHHHHCTT-SSEEEEET-SBSTSSHHHHHHHHHHHTTSSSEEEEESTTSSB-SGGGSSCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhcceecCcccccCCCCCHHHHHHHHHhhcCCcceeecCCcccccccccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999776666789999999999999999997
Q ss_pred hh
Q 020492 319 FF 320 (325)
Q Consensus 319 ~~ 320 (325)
..
T Consensus 337 Ry 338 (441)
T PF01055_consen 337 RY 338 (441)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A .... |
| >cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-74 Score=526.32 Aligned_cols=273 Identities=25% Similarity=0.432 Sum_probs=228.1
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC---------CceeeeecCCCCCChHHHHHHHHH
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD---------GFRCFTFDKERFPDPKSLAADLHL 71 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~---------~~~~f~~d~~~FPd~~~~~~~L~~ 71 (325)
|||+|||||||||++|.++++|+++++++|+++||||+|++|.+|+. ++++|+||+++||||++|+++||+
T Consensus 6 ~~P~walG~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~ 85 (292)
T cd06595 6 LLPRYAFGNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHD 85 (292)
T ss_pred CCchHHHHhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999964 567999999999999999999999
Q ss_pred CCCEEEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHH-hhhhCCccEEE
Q 020492 72 NGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK-DFIYNGVDGIW 150 (325)
Q Consensus 72 ~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~-~~~~~Gvdg~~ 150 (325)
+|+|+++|++|.|..+..+..|++.+. +..+...+ +...++|||||++++||.+.++ .+.+.||||||
T Consensus 86 ~G~k~v~~v~P~~~~~~~~~~y~~~~~-~~~~~~~~----------~~~~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W 154 (292)
T cd06595 86 RGLKVTLNLHPADGIRAHEDQYPEMAK-ALGVDPAT----------EGPILFDLTNPKFMDAYFDNVHRPLEKQGVDFWW 154 (292)
T ss_pred CCCEEEEEeCCCcccCCCcHHHHHHHH-hcCCCccc----------CCeEEecCCCHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 999999999999865544445654211 11111111 1234689999999998766664 56679999999
Q ss_pred ecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHH-HHHHHHHHHHhhcCCCCcEEEEccccCCCCcceee
Q 020492 151 NDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGML-MARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAAT 229 (325)
Q Consensus 151 ~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~-~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~ 229 (325)
+|+|||..+.. +|+++.. ++...|+.+++ +++|||++|||+|+|+|||+++
T Consensus 155 ~D~~E~~~~~~--------------------------~~~~~~~~~~~~~y~~~~~--~~~r~f~lsRs~~~G~qry~~~ 206 (292)
T cd06595 155 LDWQQGNRTRT--------------------------PGLDPLWWLNHVHYLDSAR--NGRRPLIFSRWAGLGSHRYPIG 206 (292)
T ss_pred ecCCCCccccc--------------------------CCcchHHHHHHHHHHHhhc--cCCCcEEEEeecccCCCcCCCc
Confidence 99999875410 1111111 12334555543 6799999999999999999999
Q ss_pred ecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCC-CCChhHHHHHHHhhcccccccccCCCCC-CCCCccccChh
Q 020492 230 WTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDG-NATPRLFGRWMGIGAMFPFCRGHTESDA-IDHEPWSFGEE 307 (325)
Q Consensus 230 w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~-~~~~eL~~RW~q~~af~P~~r~h~~~~~-~~~~Pw~~~~~ 307 (325)
|+||+.|+|+.|+.+|+.+|++|++|+||||+|||||.+ .+++|||+||+|+|||+|+||+|+..+. ..||||.|+++
T Consensus 207 WsGD~~s~W~~l~~~i~~~l~~~~sG~p~~g~DiGGF~~~~~~~ELy~RW~Q~gaf~P~~R~H~~~~~~~~~ePW~~g~~ 286 (292)
T cd06595 207 FSGDTIISWASLAFQPYFTATASNIGYGYWSHDIGGHMLGVTDPELYTRWIQFGVFSPILRLHSTKNPFNEKEPWLYEEE 286 (292)
T ss_pred cCCCcccCHHHHHHHHHHHHHHHhcCCCcCCCccCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCCCCccCcccCcH
Confidence 999999999999999999999999999999999999999 6999999999999999999999998754 58999999999
Q ss_pred hHHHH
Q 020492 308 VLFCS 312 (325)
Q Consensus 308 ~~~~~ 312 (325)
+++++
T Consensus 287 ~~~~~ 291 (292)
T cd06595 287 ASKIM 291 (292)
T ss_pred HHHhh
Confidence 98876
|
Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PRK10426 alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-71 Score=552.24 Aligned_cols=297 Identities=25% Similarity=0.456 Sum_probs=261.2
Q ss_pred CCCccch-hhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCC---------ceeeeecCCCCCChHHHHHHHH
Q 020492 1 MPPKWSL-GYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDG---------FRCFTFDKERFPDPKSLAADLH 70 (325)
Q Consensus 1 lpP~wal-G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~---------~~~f~~d~~~FPd~~~~~~~L~ 70 (325)
|||+||| |+|++.. .++++|+++++++|+++||||+||+| +|+.. +.+|+||+++||||++|+++||
T Consensus 203 ~~P~Wal~G~~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld-dw~~~~~~~~g~~~~~~~~~d~~~FPdp~~mi~~L~ 279 (635)
T PRK10426 203 ELPDWAYDGVTLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ-DWSGIRMTSFGKRLMWNWKWDSERYPQLDSRIKQLN 279 (635)
T ss_pred CCChhhccCcccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe-cccccccccccccccccceEChhhCCCHHHHHHHHH
Confidence 7999999 9998754 36889999999999999999999999 78642 2368999999999999999999
Q ss_pred HCCCEEEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHH-hhhhCCccEE
Q 020492 71 LNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK-DFIYNGVDGI 149 (325)
Q Consensus 71 ~~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~-~~~~~Gvdg~ 149 (325)
++|+|+++|++|+|..+ +.+|+++.++++|+++.+|+++++.+|++.++++|||||+|++||+++++ .+.+.|||||
T Consensus 280 ~~G~k~v~~i~P~v~~~--~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~ 357 (635)
T PRK10426 280 EEGIQFLGYINPYLASD--GDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGW 357 (635)
T ss_pred HCCCEEEEEEcCccCCC--CHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEE
Confidence 99999999999999874 46899999999999999999999999999999999999999999999986 5778999999
Q ss_pred EecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCccee-
Q 020492 150 WNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAA- 228 (325)
Q Consensus 150 ~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~- 228 (325)
|+|+||+ +|.+..+.. | ..+..+||+|+++++++++|++++..+.+|+|++|||+|+|+|||++
T Consensus 358 w~D~~E~---------~p~d~~~~~-----g-~~~~~~hN~Y~~l~~~~~~e~~~~~~~~~r~f~ltRsg~aGsQry~~~ 422 (635)
T PRK10426 358 MADFGEY---------LPTDAYLHN-----G-VSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTGSQKYSTL 422 (635)
T ss_pred eeeCCCC---------CCCcceeeC-----C-CCHHHhccHHHHHHHHHHHHHHHHhcCCCCcEEEEccccCCcCCcccc
Confidence 9999995 344443321 1 13567999999999999999999886677999999999999999986
Q ss_pred eecCCCCCCch---HHHHHHHHHHHccccCCCcccccCCCCCC----CCChhHHHHHHHhhcccccccccCCCCCCCCCc
Q 020492 229 TWTGDNVSNWE---HLHMSISMVLQLGLSGQPFSGPDIGGFDG----NATPRLFGRWMGIGAMFPFCRGHTESDAIDHEP 301 (325)
Q Consensus 229 ~w~GD~~s~W~---~L~~~i~~~l~~~l~G~~~~g~DigGf~~----~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~P 301 (325)
+|+||+.++|+ +|+.+|+++|++|+||+|+||+|||||.+ .+++|||+||+|+|||+|+||+|+.. .+++|
T Consensus 423 ~WsGD~~ssW~~~d~L~~~I~~~Ls~glsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~ep 500 (635)
T PRK10426 423 FWAGDQNVDWSLDDGLASVVPAALSLGMSGHGLHHSDIGGYTTLFGMKRTKELLLRWCEFSAFTPVMRTHEGN--RPGDN 500 (635)
T ss_pred ccCCCCCCcCcChhHHHHHHHHHHHHHhcCcCccccccCCCcCcCCCCCCHHHHHHHHHHhcCCceeecCCCC--CCCCC
Confidence 89999999995 89999999999999999999999999974 47999999999999999999999864 58999
Q ss_pred cccCh--hhHHHHHHHHHHh
Q 020492 302 WSFGE--EVLFCSSIVIIAF 319 (325)
Q Consensus 302 w~~~~--~~~~~~r~~~~~~ 319 (325)
|.|+. ++...++++++++
T Consensus 501 w~f~~~~~~~~~~~~~~~lR 520 (635)
T PRK10426 501 WQFDSDAETIAHFARMTRVF 520 (635)
T ss_pred CCCCCcHHHHHHHHHHHHHH
Confidence 99964 4445556666554
|
|
| >cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-71 Score=501.36 Aligned_cols=257 Identities=43% Similarity=0.849 Sum_probs=236.4
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceee--eecCCCCCChHHHHHHHHHCCCEEEe
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCF--TFDKERFPDPKSLAADLHLNGFKAIW 78 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f--~~d~~~FPd~~~~~~~L~~~G~k~~~ 78 (325)
|||+||||+|+|+++|.++++|+++++++++++||+|++++|++|+.+.++| +||+++||||++|+++||++|+|+++
T Consensus 5 ~~P~wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f~~~~d~~~Fpdp~~~i~~l~~~g~~~~~ 84 (265)
T cd06589 5 LPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGKFPNPKSMIDELHDNGVKLVL 84 (265)
T ss_pred CCcHHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCceeeeecChhhCCCHHHHHHHHHHCCCEEEE
Confidence 7999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred eeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhh-hhCCccEEEecCCCCC
Q 020492 79 MLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF-IYNGVDGIWNDMNEPA 157 (325)
Q Consensus 79 ~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~-~~~Gvdg~~~D~~e~~ 157 (325)
|++|+| ++||.++++++ .+.||||||+|+|||.
T Consensus 85 ~~~P~v----------------------------------------------~~w~~~~~~~~~~~~Gvdg~w~D~~E~~ 118 (265)
T cd06589 85 WIDPYI----------------------------------------------REWWAEVVKKLLVSLGVDGFWTDMGEPS 118 (265)
T ss_pred EeChhH----------------------------------------------HHHHHHHHHHhhccCCCCEEeccCCCCC
Confidence 999987 78999999987 6799999999999998
Q ss_pred ccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCC
Q 020492 158 VFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSN 237 (325)
Q Consensus 158 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~ 237 (325)
.++... ...+ ..+...+.++||+|+.+++|+++|++++..+++||++++||+++|+|||+++|+||+.++
T Consensus 119 ~~~~~~-------~~~~---~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~st 188 (265)
T cd06589 119 PGDGNI-------FTGG---VVGRVKHEEMHNAYPLLYAEATYEALRKNSKNKRPFILSRSGYAGSQRYAGMWSGDNTST 188 (265)
T ss_pred cCCCcc-------ccCC---cCCCccHHHHcchhHHHHHHHHHHHHHHhcCCCCeEEEEcCCcccccCcCceeCCcccCC
Confidence 754211 1110 001124678999999999999999999887789999999999999999999999999999
Q ss_pred chHHHHHHHHHHHccccCCCcccccCCCCCC-CCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHH
Q 020492 238 WEHLHMSISMVLQLGLSGQPFSGPDIGGFDG-NATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSS 313 (325)
Q Consensus 238 W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~-~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r 313 (325)
|+.|+.+|+++|++|++|+|++|+|||||.+ .+++|||+||+|+|+|+|+||+|+......+|||.|++++.+++|
T Consensus 189 W~~l~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~epw~~~~~~~~~~r 265 (265)
T cd06589 189 WGYLRSQIPAGLTMSMSGIPFVGSDIGGFTGGDPSAELYVRWFQFGAFTPIMRFHSWNSPKDTEPWAFDEEVTAIIR 265 (265)
T ss_pred HHHHHHHHHHHHhhhccCCcccCCCcCCCCCCCCCHHHHHHHHHHhcCCcceecCCCCCCCCcCCCCcCHHHHHhhC
Confidence 9999999999999999999999999999999 899999999999999999999999987778999999999988875
|
All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes |
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-68 Score=489.17 Aligned_cols=278 Identities=24% Similarity=0.415 Sum_probs=249.3
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
.+|.|.. |.+...+.|+++|+++++++++++||+|+|+||++|+..+++|+||+++||||++|+++||++|+|+++|+
T Consensus 13 ~~p~W~~--W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g~f~~d~~~FPdp~~mi~~l~~~G~k~~l~i 90 (303)
T cd06592 13 RSPIWST--WARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYGDFDFDPTKFPDPKGMIDQLHDLGFRVTLWV 90 (303)
T ss_pred CCCccCC--hhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCCccccChhhCCCHHHHHHHHHHCCCeEEEEE
Confidence 3689987 44456788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCC-CceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCCCCc
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADG-TPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNEPAV 158 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e~~~ 158 (325)
+|+|..++ ..|+++.++++|+++++| .++.+.+|+|.++++|||||+|++||.+++++++ +.||||||+|+|||..
T Consensus 91 ~P~i~~~s--~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~ 168 (303)
T cd06592 91 HPFINTDS--ENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAGEASY 168 (303)
T ss_pred CCeeCCCC--HHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeCCCCccc
Confidence 99998765 479999999999999988 7888999999999999999999999999999988 7999999999999973
Q ss_pred cCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCc
Q 020492 159 FKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNW 238 (325)
Q Consensus 159 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W 238 (325)
+|.+..+. .+..+||.|..++++++++ .++++++||+|+|+|+++++|+||+.|+|
T Consensus 169 -------~p~~~~~~---------~~~~~~n~y~~~~~~~~~~--------~~~~~~~Rsg~~g~~~~~~~w~GD~~s~W 224 (303)
T cd06592 169 -------LPQDYVTE---------DPLLNPDEYTRLYAEMVAE--------FGDLIEVRAGWRSQGLPLFVRMMDKDSSW 224 (303)
T ss_pred -------CCcccccC---------CcccCHHHHHHHHHHHHHh--------hccceEEEeeeecCCCCeeEEcCCCCCCC
Confidence 44443322 1345789999888887643 13899999999999888889999999999
Q ss_pred hHH---HHHHHHHHHccccCCCccccc-CCCCCC-------CCChhHHHHHHHhhcccccccccCCCCCCCCCccccChh
Q 020492 239 EHL---HMSISMVLQLGLSGQPFSGPD-IGGFDG-------NATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 307 (325)
Q Consensus 239 ~~L---~~~i~~~l~~~l~G~~~~g~D-igGf~~-------~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~ 307 (325)
++| +.+|+++|++|+||+|||++| ||||.+ .+++|||+||+|+|+|+|+||+| ++||.|+++
T Consensus 225 ~~~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~~~~~~~~~~~EL~~RW~q~g~f~P~~R~h-------~~PW~~~~e 297 (303)
T cd06592 225 GGDNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNSDDELPDKELYIRWLQLSAFLPVMQFS-------IAPWQYDDE 297 (303)
T ss_pred CCCcCHHHHHHHHHHhhccCCcccCCCccCCccccccccCCCCCHHHHHHHHHHHHhChhhhcc-------cCCccCCHH
Confidence 987 999999999999999999999 899874 36899999999999999999999 489999999
Q ss_pred hHHHHH
Q 020492 308 VLFCSS 313 (325)
Q Consensus 308 ~~~~~r 313 (325)
+++++|
T Consensus 298 ~~~~~~ 303 (303)
T cd06592 298 VVEIAK 303 (303)
T ss_pred HHHhhC
Confidence 998875
|
Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-66 Score=507.58 Aligned_cols=308 Identities=42% Similarity=0.807 Sum_probs=282.4
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+|+||||+|||+|.+.+++++++++++++|||+|++|+|.+|+++++|||+|+.+||+++++++.||++|+|+++++
T Consensus 292 m~pYWslGf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~ykDFTvd~~~fp~~~~fv~~Lh~~G~kyvlii 371 (805)
T KOG1065|consen 292 MPPYWSLGFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYKDFTVDKVWFPDLKDFVDDLHARGFKYVLII 371 (805)
T ss_pred CCchhhccceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcccceeeccccCcchHHHHHHHHhCCCeEEEEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCc-eeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCCCCc
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTP-FIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNEPAV 158 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e~~~ 158 (325)
+|+|+.+..|..|+++.++++++++.+|++ +++++|||.++++||+||++.+||.+.++.+.+ .++||+|+|+||+..
T Consensus 372 dP~is~~~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~wiDmnE~sn 451 (805)
T KOG1065|consen 372 DPFISTNSSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGFWIDMNEPSN 451 (805)
T ss_pred CCccccCccchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHHHHHhhcccCCccceEEECCCccc
Confidence 999999888888999999999999999988 899999999999999999999999999998886 799999999999999
Q ss_pred cCCCCCCCCCCCccCCCCCCCccccc-ccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCC
Q 020492 159 FKSVTKTMPESNIHRGDDEIGGCQNH-SYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSN 237 (325)
Q Consensus 159 ~~~~~~~~P~~~~~~~~~~~~~~~~~-~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~ 237 (325)
|+... .- .....++ .... .+.||+|++..+.|++.++.+.. ++|+++++||+|+|+.||+++|+||+.++
T Consensus 452 f~~pp-~~--~~~~~~~-----~~~~tyd~~~lyg~~~aiat~~a~~~v~-~kr~~i~srsTf~g~g~y~~hwlgdn~~~ 522 (805)
T KOG1065|consen 452 FPSPP-IN--PTLDNGD-----LYAKTYDTHNLYGYSEAIATHQALVDVP-GKRSFILSRSTFVGSGRYAGHWLGDNTAR 522 (805)
T ss_pred CCCCC-cc--ccccccc-----ccccchhhhhhHhHHHhhhhhccceecc-ccccccccccceecccccceeecccccce
Confidence 87411 00 1111111 1111 45799999999999999998886 99999999999999999999999999999
Q ss_pred chHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHH
Q 020492 238 WEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVII 317 (325)
Q Consensus 238 W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~ 317 (325)
|+.|+.+|.+||.++++|+|++|+|||||.+.+++|||.||+|+|||+|+||+|...+...+||..++. +.+.+|+++-
T Consensus 523 w~~L~~sI~gml~fnl~Gip~Vg~Dicgf~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~s-v~~a~r~~~~ 601 (805)
T KOG1065|consen 523 WEDLQTSISGMLEFNLFGIPMVGSDICGFLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSS-VAEAARNALT 601 (805)
T ss_pred ehhccccchhhhcccccCCCccchhhhcCCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHH-HHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999998888999999975 7777777764
Q ss_pred H
Q 020492 318 A 318 (325)
Q Consensus 318 ~ 318 (325)
+
T Consensus 602 ~ 602 (805)
T KOG1065|consen 602 L 602 (805)
T ss_pred h
Confidence 3
|
|
| >cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-47 Score=332.52 Aligned_cols=228 Identities=25% Similarity=0.431 Sum_probs=192.2
Q ss_pred CCCccchhh-hhhcC-----CC---------------CCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCC
Q 020492 1 MPPKWSLGY-HQCRW-----SY---------------DSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERF 59 (325)
Q Consensus 1 lpP~walG~-~~s~~-----~y---------------~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~F 59 (325)
|||+|||++ |...+ .. ..+..+++++++|+++++|+..|+-+++|..++
T Consensus 5 ~~p~~a~~~g~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y---------- 74 (261)
T cd06596 5 LLPEYALYLGDADCYNRDYWRKVPEGTSDGGLNGEKESTTDDARKVADKYKENDMPLGWMLPNDGYGCGY---------- 74 (261)
T ss_pred cchHHHHhccchhhhccCccccCCCccccccCCCCcccchhhHHHHHHHHHhcCCCceeeccCCCCcchH----------
Confidence 799999976 32222 11 235789999999999999999999999986654
Q ss_pred CChHHHHHHHHHCCCEEEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHH
Q 020492 60 PDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK 139 (325)
Q Consensus 60 Pd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~ 139 (325)
.|++++++.++++|++.++|.. ++ + .+.-+
T Consensus 75 ~~l~~~~~~~~~~g~~~glwt~------~~---------------------------------l-----------~~~~~ 104 (261)
T cd06596 75 ENLKEVVDYLHANGVETGLWTQ------SG---------------------------------L-----------RDIAK 104 (261)
T ss_pred HHHHHHHHHHHHcCCccccccc------cc---------------------------------h-----------hhhhh
Confidence 6799999999999999999832 10 0 00111
Q ss_pred hhhhCCccEEEecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccc
Q 020492 140 DFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAG 219 (325)
Q Consensus 140 ~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~ 219 (325)
.....|+...|+|-..- | ..-.|++.+++++||++++. +++|||+++||+
T Consensus 105 ev~~~g~~~~k~Dv~w~-----------------g------------~gy~~~l~~~ka~yeg~~~~-~~~RpfiltRsg 154 (261)
T cd06596 105 EVGAAGVRARKTDVAWV-----------------G------------AGYSFALNGVKAAADGIESN-SNARPFIVTVDG 154 (261)
T ss_pred hhccCCceEEeccchhh-----------------c------------cchhHHHHHHHHHHHHHHhC-CCCCCEEEEecC
Confidence 22235888899985421 0 13467788999999999876 789999999999
Q ss_pred cCCCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCC
Q 020492 220 FIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDH 299 (325)
Q Consensus 220 ~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~ 299 (325)
|+|+|||+++|+||+.++|+.|+.+|+++|++||||+||||+|||||.++ ++|||+||+|+++|+|+||+|+..++.+|
T Consensus 155 ~aGsQRy~~~WsGD~~stWe~Lr~sI~~~L~~gLsG~p~~G~DIGGF~g~-~~EL~vRW~Q~gaF~P~~R~h~~~~~~~r 233 (261)
T cd06596 155 WAGTQRYAGIWTGDQSGSWEYIRFHIPTYIGSGLSGQPNTTSDVDGIFGG-SPETYTRDLQWKAFTPVLMTMSGWAANDK 233 (261)
T ss_pred ccccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhcCCCcCccccCcCCCC-CHHHHHHHHHHHHhhhhhhhccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999998 99999999999999999999988777899
Q ss_pred CccccChhhHHHHHHHHHHh
Q 020492 300 EPWSFGEEVLFCSSIVIIAF 319 (325)
Q Consensus 300 ~Pw~~~~~~~~~~r~~~~~~ 319 (325)
|||.|++++++++|++|+|-
T Consensus 234 EPW~fge~~~~i~R~~l~LR 253 (261)
T cd06596 234 QPWVFGEPYTSINRDYLKLK 253 (261)
T ss_pred CCeeCCHHHHHHHHHHHHHH
Confidence 99999999999999999873
|
The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-19 Score=165.96 Aligned_cols=265 Identities=18% Similarity=0.213 Sum_probs=154.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCceEEEEecccCC-------CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 16 YDSDKRVREICRTFREKGIPCDVIWMDIDYMD-------GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
..+++.+++.++.+++.|+ +.|+||++|+. +.|+|..|+++||+ ++.+++.+|++|+|+++|+.|.+...
T Consensus 54 d~~e~~i~~~a~~~~~~G~--e~fviDDGW~~~r~~d~~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~~ 131 (394)
T PF02065_consen 54 DITEEKILELADAAAELGY--EYFVIDDGWFGGRDDDNAGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVSP 131 (394)
T ss_dssp G--HHHHHHHHHHHHHHT---SEEEE-SSSBCTESTTTSTTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEES
T ss_pred CCCHHHHHHHHHHHHHhCC--EEEEEcCccccccCCCcccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEeccccccc
Confidence 4588999999999988875 88999999985 35899999999999 89999999999999999999976543
Q ss_pred CCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCCCCccCCCCCCC
Q 020492 88 DGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNEPAVFKSVTKTM 166 (325)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e~~~~~~~~~~~ 166 (325)
.+ .+|+ ..++++++.++..+..+ ....++|+++|++++|..+.+.+++ ++|||++|+|+|....-
T Consensus 132 ~S-~l~~--~hPdw~l~~~~~~~~~~----r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~D~n~~~~~------- 197 (394)
T PF02065_consen 132 DS-DLYR--EHPDWVLRDPGRPPTLG----RNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKWDFNRDITE------- 197 (394)
T ss_dssp SS-CHCC--SSBGGBTCCTTSE-ECB----TTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-TTS-------
T ss_pred hh-HHHH--hCccceeecCCCCCcCc----ccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEeccccCCCC-------
Confidence 32 4665 45677776544332222 2356799999999999999998765 69999999999974321
Q ss_pred CCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCC-----cc-eeeecCCCCCCchH
Q 020492 167 PESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQ-----RY-AATWTGDNVSNWEH 240 (325)
Q Consensus 167 P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~q-----r~-~~~w~GD~~s~W~~ 240 (325)
+ +....+ ...++....+| .+.+.+++.. ...+|-+.|+.-|-. +| ...|+.|+....+.
T Consensus 198 ~------~~~~~~-~~~~~~~~~~y------~l~~~L~~~~--P~v~iE~CssGG~R~D~g~l~~~~~~w~SD~tda~~R 262 (394)
T PF02065_consen 198 A------GSPSLP-EGYHRYVLGLY------RLLDRLRARF--PDVLIENCSSGGGRFDPGMLYYTPQSWTSDNTDALER 262 (394)
T ss_dssp -------SSTTS--GHHHHHHHHHH------HHHHHHHHHT--TTSEEEE-BTTBTTTSHHHHCCSSEEESBST-SHHHH
T ss_pred C------CCCCch-HHHHHHHHHHH------HHHHHHHHhC--CCcEEEeccCCCCccccchheeccccccCCccchHHH
Confidence 0 000000 00111111222 1344555543 345566665443322 23 35899999988776
Q ss_pred HHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHHHhh
Q 020492 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFF 320 (325)
Q Consensus 241 L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~~~ 320 (325)
++.+....+.+-..=+..+.+++-.-.......|-.|=. .+.| -.+- ..-.+-...++..+.+++.|.+|+
T Consensus 263 ~~iq~g~s~~~p~~~~~~hv~~~p~~~~~r~~~l~~r~~-~a~~-g~~g-------~e~dl~~ls~~e~~~~~~~ia~YK 333 (394)
T PF02065_consen 263 LRIQYGTSLFYPPEYMGAHVSASPNHQTGRTTPLEFRAH-VAMF-GRLG-------LELDLTKLSEEELAAVKEQIAFYK 333 (394)
T ss_dssp HHHHHHHCTTSSGGGEEEEEEHSS-TTTHHHGGHHHHHH-HHTC-SEEE-------EESTGCGS-HHHHHHHHHHHHHHH
T ss_pred hhhhcccccccCHHHhCCeEEeccccccCCcccceechh-hhhc-CCce-------eccCcccCCHHHHHHHHHHHHHHH
Confidence 666654333111110001111111100011224444432 3333 3332 234555667788888999888886
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A .... |
| >PLN03231 putative alpha-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-12 Score=120.51 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=126.3
Q ss_pred CHHHHHHHHHHHHhcCC---CceEEEEecccCC--------------------CceeeeecCCCCCC------hHHHHHH
Q 020492 18 SDKRVREICRTFREKGI---PCDVIWMDIDYMD--------------------GFRCFTFDKERFPD------PKSLAAD 68 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~--------------------~~~~f~~d~~~FPd------~~~~~~~ 68 (325)
++++|++.++ +.+.|+ ..+.|+||++|+. ..+.+..|++|||+ +|.+.+.
T Consensus 16 ~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFPs~~~~~G~k~lADy 94 (357)
T PLN03231 16 SEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWPSTTGGKGFAPIAAK 94 (357)
T ss_pred CHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCCCcccCcccCCCCccccCcHHHHHH
Confidence 7899999998 556553 5799999999974 24667899999996 8999999
Q ss_pred HHHCCCEEEeeeCCccccCC---CccccccccccceeeecCC-CCceeeeecCCC-ccCCCCCChHHHHHHHHHHHhhhh
Q 020492 69 LHLNGFKAIWMLDPGIKHED---GYFVYDSGSKIDVWIQKAD-GTPFIGEVWPGP-CVFPDYTQSKVRSWWGSLVKDFIY 143 (325)
Q Consensus 69 L~~~G~k~~~~~~P~i~~~~---~~~~~~~~~~~~~~~~~~~-g~~~~~~~w~g~-~~~~Df~~p~a~~w~~~~~~~~~~ 143 (325)
+|++|+|+++++.|.+.... .+++.-.-...+.-....| ..+-+...|... ..-+|...+.+++|+.+..+.+.+
T Consensus 95 vHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~~~~c~~~~~~~~~v~~~~~gaq~y~~~~a~~fA~ 174 (357)
T PLN03231 95 VHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDIALMDQACPWMQQCFVGVNTSSEGGKLFIQSLYDQYAS 174 (357)
T ss_pred HHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhhccccccccccccccccccccchhHHHHHHHHHHHHHH
Confidence 99999999999998876432 1111100000000000000 000011123222 225799999999999999999999
Q ss_pred CCccEEEecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCC
Q 020492 144 NGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGS 223 (325)
Q Consensus 144 ~Gvdg~~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~ 223 (325)
+|||++|.|.+.+.. .. ....| .++.++|++ ..||+++|-+-..+.
T Consensus 175 WGVDylK~D~c~~~~-----------~~---------------~~~~y-----~~m~~AL~~---tGRpIv~Slc~g~~~ 220 (357)
T PLN03231 175 WGIDFIKHDCVFGAE-----------NP---------------QLDEI-----LTVSKAIRN---SGRPMIYSLSPGDGA 220 (357)
T ss_pred hCCCEEeecccCCCC-----------cc---------------cHHHH-----HHHHHHHHH---hCCCeEEEecCCCCC
Confidence 999999999653210 00 01122 244556654 468999887632111
Q ss_pred --------Ccceeee--cCCCCCCchHHHHHHHHH
Q 020492 224 --------QRYAATW--TGDNVSNWEHLHMSISMV 248 (325)
Q Consensus 224 --------qr~~~~w--~GD~~s~W~~L~~~i~~~ 248 (325)
+.++..| ++|+..+|+.+...+..+
T Consensus 221 ~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~ 255 (357)
T PLN03231 221 TPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVA 255 (357)
T ss_pred CchhhhhhhhhcCcccccCCcccchhhHHHHHHHH
Confidence 2334566 799999999988777554
|
|
| >COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.3e-13 Score=126.83 Aligned_cols=264 Identities=16% Similarity=0.180 Sum_probs=164.9
Q ss_pred hhhcCCCC---CHHHHHHHHHHHHhcCCCceEEEEecccC-------CCceeeeecCCCCCC-hHHHHHHHHHCCCEEEe
Q 020492 10 HQCRWSYD---SDKRVREICRTFREKGIPCDVIWMDIDYM-------DGFRCFTFDKERFPD-PKSLAADLHLNGFKAIW 78 (325)
Q Consensus 10 ~~s~~~y~---~~~~v~~~~~~~~~~~iP~d~i~iD~~w~-------~~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~ 78 (325)
|+|+++|+ +.+++++.++..++.+ ++.++||++|+ +..|||-.|.++||+ .+++++.++++|+++++
T Consensus 296 ~nsWea~Yfd~t~e~ile~vk~akk~g--vE~FvlDDGwfg~rndd~~slGDWlv~seKfPsgiE~li~~I~e~Gl~fGI 373 (687)
T COG3345 296 WNSWEAYYFDFTEEEILENVKEAKKFG--VELFVLDDGWFGGRNDDLKSLGDWLVNSEKFPSGIEELIEAIAENGLIFGI 373 (687)
T ss_pred eeceeeeeecCCHHHHHHHHHHHhhcC--eEEEEEccccccccCcchhhhhceecchhhccccHHHHHHHHHHcCCccce
Confidence 44555543 7899999999876555 89999999999 447899999999999 89999999999999999
Q ss_pred eeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHh-hhhCCccEEEecCCCCC
Q 020492 79 MLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKD-FIYNGVDGIWNDMNEPA 157 (325)
Q Consensus 79 ~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~-~~~~Gvdg~~~D~~e~~ 157 (325)
|+.|++...++ .+|+ .++++.|| .+|.|.... -+...+|++||.+.....+.+.. ++..-||++|.|||.-
T Consensus 374 WlePemvs~dS-dlfr--qHPDWvvk-~~G~p~~~~---Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~- 445 (687)
T COG3345 374 WLEPEMVSEDS-DLFR--QHPDWVVK-VNGYPLMAG---RNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRE- 445 (687)
T ss_pred eecchhcccch-HHHh--hCCCeEEe-cCCcccccc---ccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcc-
Confidence 99998765443 5787 78899998 678775542 13566788888877766655543 3334577777777642
Q ss_pred ccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcc-------e-ee
Q 020492 158 VFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRY-------A-AT 229 (325)
Q Consensus 158 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~-------~-~~ 229 (325)
.+.. ....+ + .. ...+ |-+ |+-.... ..+.|.|+-.|+..|..|+ + ..
T Consensus 446 l~kl------g~~~~-~--~l------~qqr--y~l------y~l~~~l-~~k~~~i~FeScasGg~r~d~gml~~~~~~ 501 (687)
T COG3345 446 LFKL------GFLFW-G--AL------PQQR--YQL------YRLFDQL-NLKFPHILFESCASGGERIDKGMLEYSPQL 501 (687)
T ss_pred eeec------CCCCC-c--cc------cchH--HHH------HHHHHHh-hhcCCCchhhhhcccccccchHHhhhcccc
Confidence 1110 00000 0 00 0011 211 2222222 2456777777766666554 2 48
Q ss_pred ecCCCCCCchHHHHHHHHHHHccccCCC--cccccCCCCCCCCChhHHHHHHHhhccc---ccccccCCCCCCCCCcccc
Q 020492 230 WTGDNVSNWEHLHMSISMVLQLGLSGQP--FSGPDIGGFDGNATPRLFGRWMGIGAMF---PFCRGHTESDAIDHEPWSF 304 (325)
Q Consensus 230 w~GD~~s~W~~L~~~i~~~l~~~l~G~~--~~g~DigGf~~~~~~eL~~RW~q~~af~---P~~r~h~~~~~~~~~Pw~~ 304 (325)
|+.|....=+.|+.+-.+ -.=+| ++|.-|++ .+-=-+||+---.+. .+|+.-+ ..-+|-..
T Consensus 502 w~Sd~~dAi~r~~iqrg~-----s~~~P~~~mGaHi~~-----~p~h~~~rm~~l~~rg~~a~~g~~g----~elD~~~l 567 (687)
T COG3345 502 WCSDLTDAIGRLDIQRGG-----SYTYPPESMGAHISA-----VPNHQARRMTSLETRGLVAHFGFWG----YELDCTIL 567 (687)
T ss_pred cCCCCcchhhhccccccC-----cccCChHHhhhhccC-----CCcHHHhhhhhhhhhhHHHHhhhhc----cCCCcccC
Confidence 999987644444332211 11234 45555553 233345666333332 2333322 25567777
Q ss_pred ChhhHHHHHHHHHHhhh
Q 020492 305 GEEVLFCSSIVIIAFFW 321 (325)
Q Consensus 305 ~~~~~~~~r~~~~~~~~ 321 (325)
.++..++..+.+.+|.-
T Consensus 568 sdeek~~~akqialyke 584 (687)
T COG3345 568 SDEEKDLTAKQIALYKE 584 (687)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 88888888888888853
|
|
| >PLN02229 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.4e-11 Score=112.21 Aligned_cols=161 Identities=17% Similarity=0.134 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHhcCC---CceEEEEecccCCC----ceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCCC
Q 020492 18 SDKRVREICRTFREKGI---PCDVIWMDIDYMDG----FRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHEDG 89 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~~----~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~~ 89 (325)
+++.|++.++.+.+.|+ ..+.|.||++|+.. .+.+..|++|||+ ++.+++.+|++|+|++++..+.+.....
T Consensus 78 ~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~G~k~ladyiH~~GlKfGIy~d~G~~TC~~ 157 (427)
T PLN02229 78 NETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQV 157 (427)
T ss_pred CHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCCcHHHHHHHHHHCCCceEEeccCCCcccCC
Confidence 78999999999866554 37999999999753 5789999999998 8999999999999999998887654321
Q ss_pred ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCCC
Q 020492 90 YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPES 169 (325)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~~ 169 (325)
.||. .++ ...-.+.+.++|||++|.|.+....
T Consensus 158 --------------------------~pGS---~g~--------e~~DA~~fA~WGVDylK~D~C~~~~----------- 189 (427)
T PLN02229 158 --------------------------RPGS---LFH--------EVDDADIFASWGVDYLKYDNCYNLG----------- 189 (427)
T ss_pred --------------------------CCCC---ccH--------HHHHHHHHHHcCCCEEEecCCCCCC-----------
Confidence 1122 121 1122445667999999999873210
Q ss_pred CccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCC------Ccceeee--cCCCCCCchHH
Q 020492 170 NIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGS------QRYAATW--TGDNVSNWEHL 241 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~------qr~~~~w--~GD~~s~W~~L 241 (325)
......|. .+.+++++ ..||+++|=+.|.-. +.++..| +||+..+|+++
T Consensus 190 ---------------~~~~~~y~-----~m~~AL~~---tGRpI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W~sv 246 (427)
T PLN02229 190 ---------------IKPIERYP-----PMRDALNA---TGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWASM 246 (427)
T ss_pred ---------------cchhHHHH-----HHHHHHHh---hCCCcEEEecCCCCCCHHHHHHhhcCeeeccCCcccccccH
Confidence 00112232 23445543 468988874433211 2345566 79999999998
Q ss_pred HHHHHHHH
Q 020492 242 HMSISMVL 249 (325)
Q Consensus 242 ~~~i~~~l 249 (325)
...+...-
T Consensus 247 ~~i~~~~~ 254 (427)
T PLN02229 247 TTIADLNN 254 (427)
T ss_pred HHHHHHHH
Confidence 88775443
|
|
| >PLN02692 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.5e-11 Score=110.41 Aligned_cols=162 Identities=19% Similarity=0.195 Sum_probs=114.4
Q ss_pred CHHHHHHHHHHHHhcCC---CceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCCC
Q 020492 18 SDKRVREICRTFREKGI---PCDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHEDG 89 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~~ 89 (325)
+++.|++.++.+.+.|+ ..+.|.||++|+. ..+.+..|++|||+ ++.+++.+|++|+|++++..+......
T Consensus 71 ~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G~~~~d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~tC~- 149 (412)
T PLN02692 71 DEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCS- 149 (412)
T ss_pred CHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCCCeeeChhhcCCcHHHHHHHHHHCCCceEEEecCCccccC-
Confidence 78999999998877765 4899999999985 35789999999998 899999999999999999876532210
Q ss_pred ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCCC
Q 020492 90 YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPES 169 (325)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~~ 169 (325)
.+.|.+..++..-.+.+.++|||++|.|.+-... .
T Consensus 150 -----------------------------------~~~pGS~g~e~~DA~~fA~WGvDylK~D~C~~~~----------~ 184 (412)
T PLN02692 150 -----------------------------------KTMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDG----------S 184 (412)
T ss_pred -----------------------------------CCCCCchHHHHHHHHHHHhcCCCEEeccccCCCC----------c
Confidence 0124456677777777888999999999873110 0
Q ss_pred CccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCC------Ccceeee--cCCCCCCchHH
Q 020492 170 NIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGS------QRYAATW--TGDNVSNWEHL 241 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~------qr~~~~w--~GD~~s~W~~L 241 (325)
.....|. ++.+++++ ..||+++|=+.+.-. ..++..| ++|+..+|+++
T Consensus 185 ----------------~~~~~y~-----~m~~AL~~---tGRpI~~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv 240 (412)
T PLN02692 185 ----------------KPTVRYP-----VMTRALMK---AGRPIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSM 240 (412)
T ss_pred ----------------chhHHHH-----HHHHHHHH---hCCCeEEEecCCCcCChhhhhhhcCCccccccccccchHhH
Confidence 0011232 33445544 458998875433222 2334566 79999999998
Q ss_pred HHHHHHHH
Q 020492 242 HMSISMVL 249 (325)
Q Consensus 242 ~~~i~~~l 249 (325)
...+....
T Consensus 241 ~~~~~~~~ 248 (412)
T PLN02692 241 ISRADMNE 248 (412)
T ss_pred HHHHHHHH
Confidence 88775443
|
|
| >PLN02899 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.9e-11 Score=115.67 Aligned_cols=192 Identities=16% Similarity=0.160 Sum_probs=123.3
Q ss_pred CHHHHHHHHHHHHhcC---CCceEEEEecccCCC-----------------ceeeeecCCCCCC------hHHHHHHHHH
Q 020492 18 SDKRVREICRTFREKG---IPCDVIWMDIDYMDG-----------------FRCFTFDKERFPD------PKSLAADLHL 71 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~---iP~d~i~iD~~w~~~-----------------~~~f~~d~~~FPd------~~~~~~~L~~ 71 (325)
++++|++.++. .+.| ...+.|+||+.|+.. ++.+.+|++|||+ ++.+.+.+|+
T Consensus 46 ~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrLvPDp~RFPSs~~g~GmK~LADYVHs 124 (633)
T PLN02899 46 SEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVHA 124 (633)
T ss_pred CHHHHHHHHHH-HHcchHhhCCeEEEEccccccccccccccccccccccCCCCCCccCcccCCCCccCCCcHHHHHHHHh
Confidence 78899998884 4444 357999999999742 4567899999994 8999999999
Q ss_pred CCCEEEeeeCCccccCC---Ccccccc-------ccccceeeecCCCCceeeeecCC-CccCCCCCChHHHHHHHHHHHh
Q 020492 72 NGFKAIWMLDPGIKHED---GYFVYDS-------GSKIDVWIQKADGTPFIGEVWPG-PCVFPDYTQSKVRSWWGSLVKD 140 (325)
Q Consensus 72 ~G~k~~~~~~P~i~~~~---~~~~~~~-------~~~~~~~~~~~~g~~~~~~~w~g-~~~~~Df~~p~a~~w~~~~~~~ 140 (325)
+|+|+++++.+.+.... +.++... +...++-.++. +.+-...-|.. ...-+|.+.+.+++++.+..+.
T Consensus 125 kGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~s~~~~~a~DI-a~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~t 203 (633)
T PLN02899 125 MGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEESGRQWRAKDI-ALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQ 203 (633)
T ss_pred CCcceEEEecCCCcccccccCCccccccccccccccccccchhhc-cccccccccCCCCcccccccccchhhhhHHHHHH
Confidence 99999999998775421 1111110 00001111110 00000111211 1123788889999999999999
Q ss_pred hhhCCccEEEecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEcccc
Q 020492 141 FIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGF 220 (325)
Q Consensus 141 ~~~~Gvdg~~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~ 220 (325)
+.++|||++|.|..-+.. .+ ...| +++.+++++ ..||++++-+-
T Consensus 204 fAsWGVDyLKyD~c~~~~------------~~---------------~~ey-----~~ms~AL~a---TGRPIvySLsp- 247 (633)
T PLN02899 204 YAEWGVDFVKHDCVFGDD------------FD---------------LEEI-----TYVSEVLKE---LDRPIVYSLSP- 247 (633)
T ss_pred HHHhCCCEEEEcCCCCCC------------CC---------------hHHH-----HHHHHHHHH---hCCCeEEEecC-
Confidence 999999999999642110 00 0112 345566654 46999998773
Q ss_pred CCCC----------cceeee--cCCCCCCchHHHHHHHHH
Q 020492 221 IGSQ----------RYAATW--TGDNVSNWEHLHMSISMV 248 (325)
Q Consensus 221 ~G~q----------r~~~~w--~GD~~s~W~~L~~~i~~~ 248 (325)
|.+ .++..| +||...+|+.+...+..+
T Consensus 248 -G~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~ 286 (633)
T PLN02899 248 -GTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVS 286 (633)
T ss_pred -CcccchhhhhhhhccCccceecCCcccchHHHHHHHHHH
Confidence 322 234456 699999999988776543
|
|
| >PLN02808 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-10 Score=107.70 Aligned_cols=163 Identities=18% Similarity=0.208 Sum_probs=114.1
Q ss_pred CCHHHHHHHHHHHHhcCC---CceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 17 DSDKRVREICRTFREKGI---PCDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
-+++.|++.++.+.+.|+ ..+.|+||++|+. ..+.+..|++|||+ ++.+++.+|++|+|++++..+......
T Consensus 46 i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~G~~~lad~iH~~GlkfGiy~~~G~~tC~ 125 (386)
T PLN02808 46 INETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGIKALADYVHSKGLKLGIYSDAGTLTCS 125 (386)
T ss_pred CCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCccHHHHHHHHHHCCCceEEEecCCccccC
Confidence 378999999999877665 4899999999975 36789999999998 899999999999999999876422111
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPE 168 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~ 168 (325)
+ ..|.+..++.+-.+.+.++|||++|.|.+-.. .
T Consensus 126 -------------------~-----------------~~pGs~~~e~~DA~~fA~WGvDylK~D~C~~~----------~ 159 (386)
T PLN02808 126 -------------------K-----------------TMPGSLGHEEQDAKTFASWGIDYLKYDNCENT----------G 159 (386)
T ss_pred -------------------C-----------------CCCcchHHHHHHHHHHHHhCCCEEeecCcCCC----------C
Confidence 0 12444566677777788899999999986311 0
Q ss_pred CCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccC--CC----Ccceeee--cCCCCCCchH
Q 020492 169 SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFI--GS----QRYAATW--TGDNVSNWEH 240 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~--G~----qr~~~~w--~GD~~s~W~~ 240 (325)
...+..|. ++.+++.+ ..||++++-+.+. .- ..++..| ++|+..+|++
T Consensus 160 ----------------~~~~~~y~-----~m~~AL~~---tGRpi~~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~ 215 (386)
T PLN02808 160 ----------------TSPQERYP-----KMSKALLN---SGRPIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDS 215 (386)
T ss_pred ----------------ccHHHHHH-----HHHHHHHH---hCCCeEEEecCCCCCCHHHHHHhhcCcccccCCcccchhh
Confidence 00122332 33445544 3689888744322 11 2234456 7999999999
Q ss_pred HHHHHHHHH
Q 020492 241 LHMSISMVL 249 (325)
Q Consensus 241 L~~~i~~~l 249 (325)
+...+....
T Consensus 216 v~~~~~~~~ 224 (386)
T PLN02808 216 MTSRADQND 224 (386)
T ss_pred HHHHHHhhh
Confidence 888775443
|
|
| >KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.4e-06 Score=79.84 Aligned_cols=191 Identities=21% Similarity=0.284 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHhcC---CCceEEEEecccCCCcee----eeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCCCc
Q 020492 19 DKRVREICRTFREKG---IPCDVIWMDIDYMDGFRC----FTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHEDGY 90 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~---iP~d~i~iD~~w~~~~~~----f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~~~ 90 (325)
+.-++++++.+.+.| +....|.||+-|.+..++ ...|+.+||. .+++.+.+|.+|+|++++.+-.-..
T Consensus 59 E~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~grLva~~~rFP~Gi~~ladyvHs~GLKlGiYsD~G~~T---- 134 (414)
T KOG2366|consen 59 EQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDGRLVADPSRFPSGIKALADYVHSKGLKLGIYSDAGNFT---- 134 (414)
T ss_pred HHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCccccccChhhcccchhhhhhchhhcCCceeeeeccCchh----
Confidence 677788899888866 678999999999765444 4578999998 6999999999999999864422100
Q ss_pred cccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCCCC
Q 020492 91 FVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESN 170 (325)
Q Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~~~ 170 (325)
+...|| .......--+.+.++|||+.|+|.+.... ..
T Consensus 135 ----------------------C~g~PG-----------S~~~e~~DA~tFA~WgvDylKlD~C~~~~---------~~- 171 (414)
T KOG2366|consen 135 ----------------------CAGYPG-----------SLGHEESDAKTFADWGVDYLKLDGCFNNL---------IT- 171 (414)
T ss_pred ----------------------hccCCc-----------ccchhhhhhhhhHhhCCcEEecccccccc---------cc-
Confidence 011112 11112222345678999999999875311 00
Q ss_pred ccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEE-cccc---CC---------CCcceeee--cCCCC
Q 020492 171 IHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLT-RAGF---IG---------SQRYAATW--TGDNV 235 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~s-rs~~---~G---------~qr~~~~w--~GD~~ 235 (325)
..-.|+.+ ++ ++ +...||++.| |+-- .+ .+.++..| .+|+.
T Consensus 172 ----------------~~~~Yp~m-s~----aL---N~tGrpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~ 227 (414)
T KOG2366|consen 172 ----------------MPEGYPIM-SR----AL---NNTGRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQ 227 (414)
T ss_pred ----------------ccccchhH-HH----HH---hccCCceEEEeccCcccccCccCCCcchhhhhhhccccchhhhh
Confidence 11123222 11 22 3467999999 5521 22 23444566 58999
Q ss_pred CCchHHHHHHHHHHHccccCCCcccccCCCCCCC---------CChhHHHHHHHhhcc
Q 020492 236 SNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN---------ATPRLFGRWMGIGAM 284 (325)
Q Consensus 236 s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~---------~~~eL~~RW~q~~af 284 (325)
.+|..+...|...-.+.=.=.|.-|+ ||+... -+.|+|. .||+.+
T Consensus 228 dtW~Sv~~I~d~~~~nqd~~~~~agP--g~WNDpDmL~iGN~G~s~e~y~--~qf~lW 281 (414)
T KOG2366|consen 228 DTWKSVDSIIDYICWNQDRIAPLAGP--GGWNDPDMLEIGNGGMSYEEYK--GQFALW 281 (414)
T ss_pred hHHHHHHHHHHHHhhhhhhhccccCC--CCCCChhHhhcCCCCccHHHHH--HHHHHH
Confidence 99998877776555555555677776 776531 3678887 566655
|
|
| >PLN02355 probable galactinol--sucrose galactosyltransferase 1 | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.8e-05 Score=77.85 Aligned_cols=139 Identities=12% Similarity=0.129 Sum_probs=82.6
Q ss_pred hhhcCCCC---CHHHHHHHHHHHHhcCCCceEEEEecccCCCc--------------------eeeeecCCCCC------
Q 020492 10 HQCRWSYD---SDKRVREICRTFREKGIPCDVIWMDIDYMDGF--------------------RCFTFDKERFP------ 60 (325)
Q Consensus 10 ~~s~~~y~---~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~--------------------~~f~~d~~~FP------ 60 (325)
|++++.|+ |++.|++.++.+.+.++|+..+.||++||.-. ..|+-|+ |||
T Consensus 207 WCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~-KF~~~~~~~ 285 (758)
T PLN02355 207 WCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENH-KFQKNGKEG 285 (758)
T ss_pred EEehhHhhccCCHHHHHHHHHHHHhCCCCccEEEEeccccccccccccccccccccchhhhhhccccccc-ccccccccc
Confidence 34444443 68999999999999999999999999998621 1233333 666
Q ss_pred --------ChHHHHHHHHH-CCCEEE-eeeC-----CccccCCC-cccccccc-----ccceeeecCCCCceeeeecCCC
Q 020492 61 --------DPKSLAADLHL-NGFKAI-WMLD-----PGIKHEDG-YFVYDSGS-----KIDVWIQKADGTPFIGEVWPGP 119 (325)
Q Consensus 61 --------d~~~~~~~L~~-~G~k~~-~~~~-----P~i~~~~~-~~~~~~~~-----~~~~~~~~~~g~~~~~~~w~g~ 119 (325)
+++.+++.||+ .|+|.+ +|-. =.|.++.. ...|+... .+++....++.... ..-++.
T Consensus 286 ~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d--~i~~~G 363 (758)
T PLN02355 286 HRVDDPALGLGHIVTEIKEKHSLKYVYVWHAITGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALE--SITTNG 363 (758)
T ss_pred ccccCCCCcHHHHHHHHHhhcCCcEEEEeeeecceecCcCCCCcccccccccccccccCCcccccCcchhhh--hcccCc
Confidence 57899999997 588854 5632 11222211 11232211 11121111111000 000111
Q ss_pred ccCCCCCChH-HHHHHHHHHHhhhhCCccEEEecCC
Q 020492 120 CVFPDYTQSK-VRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 120 ~~~~Df~~p~-a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
...+ +|+ +..+|.+.+..|.+.||||+|.|..
T Consensus 364 ~glv---~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q 396 (758)
T PLN02355 364 LGLV---NPEKVFSFYNELHSYLASAGIDGVKVDVQ 396 (758)
T ss_pred eecc---CHHHHHHHHHHHHHHHHHcCCCeEEEchh
Confidence 2233 344 6788999999999999999999975
|
|
| >PLN02219 probable galactinol--sucrose galactosyltransferase 2 | Back alignment and domain information |
|---|
Probab=97.92 E-value=8.1e-05 Score=74.51 Aligned_cols=148 Identities=20% Similarity=0.271 Sum_probs=86.1
Q ss_pred CccchhhhhhcC-CCC---CHHHHHHHHHHHHhcCCCceEEEEecccCCC--------------------ceeeeecC--
Q 020492 3 PKWSLGYHQCRW-SYD---SDKRVREICRTFREKGIPCDVIWMDIDYMDG--------------------FRCFTFDK-- 56 (325)
Q Consensus 3 P~walG~~~s~~-~y~---~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~--------------------~~~f~~d~-- 56 (325)
|.|-=||=.|.| .|+ |++.|++.++.+.+.++|+..++||++||.- ...|+-|+
T Consensus 195 p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF 274 (775)
T PLN02219 195 PSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKF 274 (775)
T ss_pred ccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccCccccccccccccccccccchhhhhhccccccccc
Confidence 444444433444 443 6899999999999999999999999999852 11232222
Q ss_pred ------CCCCC-hHHHHHHHHH-CCCEEE-eeeC-----CccccCC-CccccccccccceeeecCC--C-Cceee--eec
Q 020492 57 ------ERFPD-PKSLAADLHL-NGFKAI-WMLD-----PGIKHED-GYFVYDSGSKIDVWIQKAD--G-TPFIG--EVW 116 (325)
Q Consensus 57 ------~~FPd-~~~~~~~L~~-~G~k~~-~~~~-----P~i~~~~-~~~~~~~~~~~~~~~~~~~--g-~~~~~--~~w 116 (325)
..||. ++.+++.+|+ .|+|.+ +|-. =.|.++. ....|+... .+-+..++ + .|-+. ..-
T Consensus 275 ~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~--~~p~~spg~~~~~pd~a~d~l~ 352 (775)
T PLN02219 275 QKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPAAAGMEHYDSAL--AYPVQSPGVLGNQPDIVMDSLS 352 (775)
T ss_pred cccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCCCcccccccccc--cccccCCCccccCcchhhhhhh
Confidence 13665 7999999997 588854 5632 1222221 112233211 11111111 0 01000 000
Q ss_pred CCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 117 PGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 117 ~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
.+....+| ..++..+|.+.+..|.+.||||+|.|..
T Consensus 353 ~~G~glV~--P~~~~~FYd~~hsyLas~GVDgVKVDvQ 388 (775)
T PLN02219 353 VHGLGLVN--PKKVFNFYNELHAYLASCGVDGVKVDVQ 388 (775)
T ss_pred hCCccccC--HHHHHHHHHHHHHHHHHcCCCEEEEchh
Confidence 01123343 2457799999999999999999999965
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00023 Score=57.23 Aligned_cols=120 Identities=18% Similarity=0.266 Sum_probs=77.1
Q ss_pred HHHHHHHHHhcCCCceEEEEecccCCCceeeeecCC----CC----CC-hHHHHHHHHHCCCEEEeeeCCccccCCCccc
Q 020492 22 VREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKE----RF----PD-PKSLAADLHLNGFKAIWMLDPGIKHEDGYFV 92 (325)
Q Consensus 22 v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~----~F----Pd-~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~ 92 (325)
..++++.+++.++ +++.+... ..+.+.+=++ +- .| +.++++.+|+.|+|++..++... ++ .+
T Consensus 2 ~~~~~~~lk~~~v--~si~i~a~---~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~ay~~~~~--d~--~~ 72 (132)
T PF14871_consen 2 PEQFVDTLKEAHV--NSITIFAK---CHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPAYFDFSW--DE--DA 72 (132)
T ss_pred HHHHHHHHHHhCC--CEEEEEcc---cccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEEEEeeec--Ch--HH
Confidence 3567888888886 77777533 0011111010 11 25 48999999999999999988762 22 23
Q ss_pred cccccccceeeecCCCCceeeeecCCC-ccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecC
Q 020492 93 YDSGSKIDVWIQKADGTPFIGEVWPGP-CVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDM 153 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~~w~g~-~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~ 153 (325)
++ .++++++++++|+|......... ....-+ |..-++....+++.+++ .++||+++|+
T Consensus 73 ~~--~HPeW~~~~~~G~~~~~~~~~~~~~~~~c~-ns~Y~e~~~~~i~Ei~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 73 AE--RHPEWFVRDADGRPMRGERFGYPGWYTCCL-NSPYREFLLEQIREILDRYDVDGIFFDI 132 (132)
T ss_pred HH--hCCceeeECCCCCCcCCCCcCCCCceecCC-CccHHHHHHHHHHHHHHcCCCCEEEecC
Confidence 44 78999999999986322211111 122333 34556888888888876 8999999995
|
|
| >PLN02684 Probable galactinol--sucrose galactosyltransferase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00011 Score=73.43 Aligned_cols=145 Identities=17% Similarity=0.210 Sum_probs=85.9
Q ss_pred CccchhhhhhcC-CCC---CHHHHHHHHHHHHhcCCCceEEEEecccCCCce-------------------eeeecCCCC
Q 020492 3 PKWSLGYHQCRW-SYD---SDKRVREICRTFREKGIPCDVIWMDIDYMDGFR-------------------CFTFDKERF 59 (325)
Q Consensus 3 P~walG~~~s~~-~y~---~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~-------------------~f~~d~~~F 59 (325)
|.|.=||=.|.| .|+ +++.|++.++.+.+.++|+..+.||++||.-.+ .|+- .++|
T Consensus 198 P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDDGwQs~~~d~~~~~~~~~~~q~~~rL~~f~e-n~KF 276 (750)
T PLN02684 198 PGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDDGWQSVGGDPTVEAGDEKKEQPLLRLTGIKE-NEKF 276 (750)
T ss_pred ccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEecccccccccccccccccccchhhhhhccCcc-cccc
Confidence 444445533444 443 689999999999999999999999999986321 1222 2456
Q ss_pred C-------ChHHHHHHHHH-CCCEEE-eeeC-----CccccCCC-cccccccc-----ccceeeecCC--CCceeeeecC
Q 020492 60 P-------DPKSLAADLHL-NGFKAI-WMLD-----PGIKHEDG-YFVYDSGS-----KIDVWIQKAD--GTPFIGEVWP 117 (325)
Q Consensus 60 P-------d~~~~~~~L~~-~G~k~~-~~~~-----P~i~~~~~-~~~~~~~~-----~~~~~~~~~~--g~~~~~~~w~ 117 (325)
| +++.+++.|++ .|+|.+ +|-. =.|.++.. ...|+..+ .++.....++ ++... -+
T Consensus 277 ~~~~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~---~~ 353 (750)
T PLN02684 277 KKKDDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGGVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMT---LQ 353 (750)
T ss_pred ccccCCCccHHHHHHHHHhhcCCcEEEEEeeecccccccCCCCcchhhccccccccccCccccccCccccccccc---cC
Confidence 5 57999999985 588854 5632 12222211 11232111 1122222221 11000 00
Q ss_pred CCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 118 GPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 118 g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
| ...+|- .++..+|.+.+..|.+.||||+|.|..
T Consensus 354 g-~glv~P--~~~~~FYd~~hsyL~s~GVDgVKVD~Q 387 (750)
T PLN02684 354 G-LGLVNP--KKVYKFYNELHSYLADAGIDGVKVDVQ 387 (750)
T ss_pred c-ccccCH--HHHHHHHHHHHHHHHHcCCCeEEEChh
Confidence 1 122331 456789999999999999999999975
|
|
| >PLN02711 Probable galactinol--sucrose galactosyltransferase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0002 Score=71.82 Aligned_cols=131 Identities=13% Similarity=0.074 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCCc-------------------------eeeeec---------CCCCC-Ch
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDGF-------------------------RCFTFD---------KERFP-DP 62 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~-------------------------~~f~~d---------~~~FP-d~ 62 (325)
+++.|++-++.+++.|+|...++||++||.-- ..|+-| ++.|| ++
T Consensus 228 t~egI~~gl~~L~~~Gip~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~Gl 307 (777)
T PLN02711 228 HPQGVWEGVKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNKGM 307 (777)
T ss_pred CHHHHHHHHHHHHhCCCCccEEEEcCCcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCCcH
Confidence 68999999999999999999999999998511 012222 22344 36
Q ss_pred HHHHHHHHHC--CCEEE-eeeC-----CccccCCCccccccccccceeeecCCCC----ceee--eecCCCccCCCCCCh
Q 020492 63 KSLAADLHLN--GFKAI-WMLD-----PGIKHEDGYFVYDSGSKIDVWIQKADGT----PFIG--EVWPGPCVFPDYTQS 128 (325)
Q Consensus 63 ~~~~~~L~~~--G~k~~-~~~~-----P~i~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~--~~w~g~~~~~Df~~p 128 (325)
+.+++.||++ |+|.+ +|-. =.|.++.. ...++ +-+..+...|. +-+. ..-.+...++|- .
T Consensus 308 k~~v~~iK~~~~~vk~VyVWHAL~GYWGGv~P~~~--~~~~~--~~~~p~~spg~~~~~~d~~~d~~~~~g~glv~P--e 381 (777)
T PLN02711 308 GAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVP--GLPES--KVVAPKLSPGLKMTMEDLAVDKIVNNGVGLVPP--E 381 (777)
T ss_pred HHHHHHHHhhCCCCCEEEEeeeccCcccCcCCCCC--CCccc--eeeccccCcccccccccccccccccCcccccCH--H
Confidence 8889999995 68754 5632 11222211 00000 00111111110 0000 000011222331 3
Q ss_pred HHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 129 KVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 129 ~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
++.++|.+.+..|.+.||||+|.|..
T Consensus 382 ~~~~FY~~~hs~Las~GVDgVKVDvQ 407 (777)
T PLN02711 382 LAYQMYEGLHSHLQSVGIDGVKVDVI 407 (777)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEchh
Confidence 45788999999999999999999954
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0011 Score=61.23 Aligned_cols=134 Identities=16% Similarity=0.240 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCceEEEEecccCCC------ceee----eecCCCCC--C-hHHHHHHHHHCCCEEEeeeCC
Q 020492 16 YDSDKRVREICRTFREKGIPCDVIWMDIDYMDG------FRCF----TFDKERFP--D-PKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~------~~~f----~~d~~~FP--d-~~~~~~~L~~~G~k~~~~~~P 82 (325)
+.+.+++.++++.+++.|+ -+|.++.-..++ .-.+ +-...+=| | ++.+|++-|++|+++--|+..
T Consensus 15 ~~~~~~~~~~l~~l~~~~~--N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~ 92 (311)
T PF02638_consen 15 WPSKEQIDEMLDDLKSAGF--NAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRV 92 (311)
T ss_pred CCCHHHHHHHHHHHHHcCC--CEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEe
Confidence 3478899999999999995 556555433221 1111 00111111 3 489999999999999999843
Q ss_pred ccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecC
Q 020492 83 GIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDM 153 (325)
Q Consensus 83 ~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~ 153 (325)
.+.......+.+ .+...+..+..|....-..-.+...++|..+||++++..+.++.+++ ..|||+-+|-
T Consensus 93 ~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~YdvDGIhlDd 162 (311)
T PF02638_consen 93 GFNAPDVSHILK--KHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYDVDGIHLDD 162 (311)
T ss_pred ecCCCchhhhhh--cCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCCCCeEEecc
Confidence 332221111111 22233332222221111011244668999999999999999999885 7999999993
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00095 Score=66.52 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCCC---c----ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMDG---F----RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~---~----~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
.+-..|.+-++.+++.|| ++|||-+-+... . .+ +.+|+ +|- +++++|+.+|++|+|+++-+.+ ++
T Consensus 25 Gdl~gi~~~Ldyl~~LGv--~~i~L~Pi~~~~~~~~gY~~~dy~~vd~-~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~ 101 (539)
T TIGR02456 25 GDFPGLTSKLDYLKWLGV--DALWLLPFFQSPLRDDGYDVSDYRAILP-EFGTIDDFKDFVDEAHARGMRVIIDLVLNHT 101 (539)
T ss_pred cCHHHHHHhHHHHHHCCC--CEEEECCCcCCCCCCCCCCcccccccCh-hhCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 355677777888877665 889887654321 1 22 24443 454 3689999999999999997665 34
Q ss_pred ccCCCcccccc------ccccceeeecCCCCceee----------eecC--------------CCccCCCCCChHHHHHH
Q 020492 85 KHEDGYFVYDS------GSKIDVWIQKADGTPFIG----------EVWP--------------GPCVFPDYTQSKVRSWW 134 (325)
Q Consensus 85 ~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~----------~~w~--------------g~~~~~Df~~p~a~~w~ 134 (325)
+.+. +.|++ ....++|+....+..+.. ..|. ....-+|+.||++++..
T Consensus 102 s~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~vr~~l 179 (539)
T TIGR02456 102 SDQH--PWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDTEKSNWTFDPVAKQYYWHRFFSHQPDLNYDNPAVHDAV 179 (539)
T ss_pred CCCC--HHHHHHhhCCCCCCCceEEecCCCcccccccccccccCCCCccccCCcCeeEEecccCCCCccCCCCHHHHHHH
Confidence 3322 12211 112344543222211110 1121 11224789999999999
Q ss_pred HHHHHhhhhCCccEEEecCC
Q 020492 135 GSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 135 ~~~~~~~~~~Gvdg~~~D~~ 154 (325)
.+.++.+++.|||||-+|..
T Consensus 180 ~~~~~~w~~~GvDGfRlDav 199 (539)
T TIGR02456 180 HDVMRFWLDLGVDGFRLDAV 199 (539)
T ss_pred HHHHHHHHHcCCCEEEEecH
Confidence 99999999999999999964
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0016 Score=60.03 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=88.9
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeec------------CCCCCChHHHHHHHHHCCCEEEeee
Q 020492 13 RWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFD------------KERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 13 ~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d------------~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
.+.-.+.+.+.++++.+++.++ .+++||.- ++.|..+++ +....|++++++.||++|+.++-.+
T Consensus 6 ~~~a~~~~~~~~~~~~i~~t~l--NavVIDvK--dd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARI 81 (316)
T PF13200_consen 6 AYSAGSPERLDKLLDLIKRTEL--NAVVIDVK--DDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARI 81 (316)
T ss_pred hhhcCCHHHHHHHHHHHHhcCC--ceEEEEEe--cCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 3344466778889999888886 77888843 222322221 2223789999999999999988776
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
.-|= +. ..- ....++-+++.+|++.... ....++|.++++++++-.+..+...+.|||.+-+|.-.
T Consensus 82 v~Fk--D~---~la-~~~pe~av~~~~G~~w~d~---~~~~WvnP~~~evw~Y~i~IA~Eaa~~GFdEIqfDYIR 147 (316)
T PF13200_consen 82 VVFK--DP---VLA-EAHPEWAVKTKDGSVWRDN---EGEAWVNPYSKEVWDYNIDIAKEAAKLGFDEIQFDYIR 147 (316)
T ss_pred EEec--Ch---HHh-hhChhhEEECCCCCcccCC---CCCccCCCCCHHHHHHHHHHHHHHHHcCCCEEEeeeee
Confidence 5331 11 111 1245566666676543311 12568999999999999998888889999999999754
|
|
| >PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0016 Score=65.78 Aligned_cols=146 Identities=21% Similarity=0.343 Sum_probs=82.6
Q ss_pred CccchhhhhhcCC--C--CCHHHHHHHHHHHHhcCCCceEEEEecccCCCce-----------------ee-----eec-
Q 020492 3 PKWSLGYHQCRWS--Y--DSDKRVREICRTFREKGIPCDVIWMDIDYMDGFR-----------------CF-----TFD- 55 (325)
Q Consensus 3 P~walG~~~s~~~--y--~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~-----------------~f-----~~d- 55 (325)
|.|.=+|=.|.|. | -+++.|++.++.+++.|||...++||++||.-.. .| .++
T Consensus 191 P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~e 270 (747)
T PF05691_consen 191 PEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDDGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKE 270 (747)
T ss_pred hhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEecchhcccccCcccccccccccccccccchhhhhhhh
Confidence 3344344344542 2 2679999999999999999999999999984110 11 010
Q ss_pred ------------CCCCCC-hHHHHHHHHHC--CCEEE-eeeC-----CccccCCCccccccc-----cccceeeecCCCC
Q 020492 56 ------------KERFPD-PKSLAADLHLN--GFKAI-WMLD-----PGIKHEDGYFVYDSG-----SKIDVWIQKADGT 109 (325)
Q Consensus 56 ------------~~~FPd-~~~~~~~L~~~--G~k~~-~~~~-----P~i~~~~~~~~~~~~-----~~~~~~~~~~~g~ 109 (325)
.+.||. ++.++++||++ |+|.+ +|-. =.|.++.. ..|+.. ..++.....++-
T Consensus 271 n~kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~GYWgGi~P~~~-~~~~~k~~~~~~spg~~~~~~d~- 348 (747)
T PF05691_consen 271 NSKFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCGYWGGISPDGM-LAYNYKLVYPKLSPGLQGNMPDL- 348 (747)
T ss_pred hhhhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcceecCcCCCCc-cccccceeecccCCcccccCccc-
Confidence 124664 79999999998 78754 5642 12333221 111100 000100000000
Q ss_pred ceeeeecCCCccCCCCCCh-HHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 110 PFIGEVWPGPCVFPDYTQS-KVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 110 ~~~~~~w~g~~~~~Df~~p-~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
.....-.+....+ +| ++..+|.+.+..|.+.||||+|.|..
T Consensus 349 -~~d~~~~~g~glv---~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q 390 (747)
T PF05691_consen 349 -AVDSIVKGGLGLV---DPEDAFRFYDDFHSYLASAGVDGVKVDVQ 390 (747)
T ss_pred -cccccccCccccc---CHHHHHHHHHHHHHHHHHcCCCEEEEchh
Confidence 0000000111122 34 56789999999999999999999965
|
Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway []. |
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0024 Score=60.69 Aligned_cols=136 Identities=15% Similarity=0.085 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHHhcCCC-ceEEEEecccC---CCceeeeec------CCCCCC-hHHHHHHHHHCCCEEEeeeCCcc
Q 020492 16 YDSDKRVREICRTFREKGIP-CDVIWMDIDYM---DGFRCFTFD------KERFPD-PKSLAADLHLNGFKAIWMLDPGI 84 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~iP-~d~i~iD~~w~---~~~~~f~~d------~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i 84 (325)
-.+++++.+.++++++.|+. +-..+..+++. +...-++-+ ....=| ++.+|++-|++|+++..|+.|+.
T Consensus 60 ~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf~~~~ 139 (418)
T COG1649 60 LFQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLEVHAWFNPYR 139 (418)
T ss_pred cccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCChHHHHHHHHHhcCCeeeechhhcc
Confidence 35789999999999999986 33333333442 222222222 122234 48999999999999999999976
Q ss_pred ccCCCccccccccccceeeecCCCCceee-eecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIG-EVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
....... ....+........+|..+.- ..|- ...++|-.+||+++|..+.+-.++. +.|||+-+|--
T Consensus 140 ~a~~~s~--~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~ldPg~Pevq~~i~~lv~evV~~YdvDGIQfDd~ 208 (418)
T COG1649 140 MAPPTSP--LTKRHPHWLTTKRPGWVYVRHQGWG-KRVWLDPGIPEVQDFITSLVVEVVRNYDVDGIQFDDY 208 (418)
T ss_pred cCCCCCh--hHhhCCCCcccCCCCeEEEecCCce-eeeEeCCCChHHHHHHHHHHHHHHhCCCCCceeccee
Confidence 5432111 11233444444434433221 1110 4677999999999999999887774 89999999853
|
|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0025 Score=63.61 Aligned_cols=133 Identities=17% Similarity=0.277 Sum_probs=80.0
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCC-----c--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDG-----F--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-----~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-..|.+-++.+++.|| ++|||-+-+... + .+ +..|+ +|- ++++||+.+|++|+|+++-+.+ +++
T Consensus 31 dl~gi~~~ldyl~~lGv--~~i~l~P~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH~s 107 (551)
T PRK10933 31 DLRGVTQRLDYLQKLGV--DAIWLTPFYVSPQVDNGYDVANYTAIDP-TYGTLDDFDELVAQAKSRGIRIILDMVFNHTS 107 (551)
T ss_pred CHHHHHHhhHHHHhCCC--CEEEECCCCCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence 45667788888887775 889887654321 1 12 23332 444 4799999999999999987665 333
Q ss_pred cCCCccccccc-----cccceeeecC--CCC---cee----eee--cC------------CCccCCCCCChHHHHHHHHH
Q 020492 86 HEDGYFVYDSG-----SKIDVWIQKA--DGT---PFI----GEV--WP------------GPCVFPDYTQSKVRSWWGSL 137 (325)
Q Consensus 86 ~~~~~~~~~~~-----~~~~~~~~~~--~g~---~~~----~~~--w~------------g~~~~~Df~~p~a~~w~~~~ 137 (325)
.+.. -|.++ .-.++++-.. .+. .+. +.. |. ....-+|+.||++++...+.
T Consensus 108 ~~~~--wf~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdLn~~np~V~~~l~~~ 185 (551)
T PRK10933 108 TQHA--WFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKV 185 (551)
T ss_pred Cchh--HHHhhcCCCCCCcCceEecCCCCCCCCCcccccCCCccccccCCCCceEeecccccCCccCCCCHHHHHHHHHH
Confidence 3221 12111 1123333211 000 000 000 11 01234778999999999999
Q ss_pred HHhhhhCCccEEEecCCC
Q 020492 138 VKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 138 ~~~~~~~Gvdg~~~D~~e 155 (325)
++.+++.|||||-+|...
T Consensus 186 ~~~W~~~GvDGfRlDa~~ 203 (551)
T PRK10933 186 CEFWADRGVDGLRLDVVN 203 (551)
T ss_pred HHHHHHCCCcEEEEcchh
Confidence 999889999999999654
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0066 Score=58.61 Aligned_cols=134 Identities=18% Similarity=0.226 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecccCC----Cc---eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccccC
Q 020492 19 DKRVREICRTFREKGIPCDVIWMDIDYMD----GF---RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKHE 87 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~---~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~~ 87 (325)
-..|.+-++.+++.|| ++|||-+-..+ ++ ..|..|+.+|-+ +++||+.+|++|+|+++-+.+ +...+
T Consensus 43 ~~~i~~kldyL~~LGv--taIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~~~~ 120 (428)
T PLN00196 43 YNFLMGKVDDIAAAGI--THVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAE 120 (428)
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCcccc
Confidence 4668888888888886 88998865432 12 125666667864 799999999999999987654 33221
Q ss_pred CC-----cccccccc---ccceeee--cCCCCcee---e--eecCCCcc--CCCCCChHHHHHHHHHHHhhh-hCCccEE
Q 020492 88 DG-----YFVYDSGS---KIDVWIQ--KADGTPFI---G--EVWPGPCV--FPDYTQSKVRSWWGSLVKDFI-YNGVDGI 149 (325)
Q Consensus 88 ~~-----~~~~~~~~---~~~~~~~--~~~g~~~~---~--~~w~g~~~--~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~ 149 (325)
.. +..+..+. ..+++.. ..+.+.+. + ..|.+-.. -+|..||++++...+.++-+. +.|||||
T Consensus 121 ~~~~~~~y~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~lpDLn~~np~V~~~l~~~~~wl~~~~GiDG~ 200 (428)
T PLN00196 121 HKDGRGIYCLFEGGTPDSRLDWGPHMICRDDTQYSDGTGNLDTGADFAAAPDIDHLNKRVQRELIGWLLWLKSDIGFDAW 200 (428)
T ss_pred cccCCCceEECCCCCCCCccccccccCCCCcccccCCCCceeCCCCCCCCCccCCCCHHHHHHHHHHHHHHhhCCCCCEE
Confidence 10 11121110 0111100 00000000 0 11111122 367889999999998887775 5899999
Q ss_pred EecCC
Q 020492 150 WNDMN 154 (325)
Q Consensus 150 ~~D~~ 154 (325)
-+|..
T Consensus 201 RlD~a 205 (428)
T PLN00196 201 RLDFA 205 (428)
T ss_pred Eeehh
Confidence 99976
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0007 Score=61.78 Aligned_cols=132 Identities=22% Similarity=0.413 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecccCC-----Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccccC
Q 020492 20 KRVREICRTFREKGIPCDVIWMDIDYMD-----GF--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIKHE 87 (325)
Q Consensus 20 ~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~~~ 87 (325)
.-|.+-++.+++.|| ++||+-+-+.. ++ .+ +.+|+ +|- ++++||+.+|++|+|+++-+.+ +++..
T Consensus 4 ~gi~~kLdyl~~lGv--~~I~l~Pi~~~~~~~~gY~~~d~~~vd~-~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 4 RGIIDKLDYLKDLGV--NAIWLSPIFESPNGYHGYDPSDYYAVDP-RFGTMEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp HHHHHTHHHHHHHTE--SEEEESS-EESSSSTTTTSESEEEEEST-TTBHHHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred HHHHHhhHHHHHcCC--Cceecccccccccccccccceeeecccc-ccchhhhhhhhhhccccccceEEEeeeccccccc
Confidence 456777888888775 88887643322 11 23 34555 565 4799999999999999998766 34333
Q ss_pred CCcc----ccccccccceeeec-----C--------CCCceeeeecC------CCccCCCCCChHHHHHHHHHHHhhhhC
Q 020492 88 DGYF----VYDSGSKIDVWIQK-----A--------DGTPFIGEVWP------GPCVFPDYTQSKVRSWWGSLVKDFIYN 144 (325)
Q Consensus 88 ~~~~----~~~~~~~~~~~~~~-----~--------~g~~~~~~~w~------g~~~~~Df~~p~a~~w~~~~~~~~~~~ 144 (325)
...+ ........+++... + ++..+....+. ....-+|+.||++++...+.++..++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~~~~~w~~~ 160 (316)
T PF00128_consen 81 HPWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIIDVLKFWIEE 160 (316)
T ss_dssp SHHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccceeecccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchhhc
Confidence 2110 00011123333311 0 11112211111 112347889999999999999999999
Q ss_pred CccEEEecCC
Q 020492 145 GVDGIWNDMN 154 (325)
Q Consensus 145 Gvdg~~~D~~ 154 (325)
|||||-+|..
T Consensus 161 giDGfR~D~~ 170 (316)
T PF00128_consen 161 GIDGFRLDAA 170 (316)
T ss_dssp TESEEEETTG
T ss_pred eEeEEEEccc
Confidence 9999999975
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0044 Score=62.51 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC--Cc----ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD--GF----RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~--~~----~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-+-|.+-++-++++|| ++|+|-+=... .+ .+ +..|+ .|. +++++++.+|++|+|+++-+.+ +++.
T Consensus 177 Dl~GI~~kLdYL~~LGv--~~I~L~Pif~s~s~hgYd~~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 177 DLDGISEKLPYLKKLGV--TALYLNPIFTAPSVHKYDTEDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 56778888888888776 88998865432 11 12 23443 444 4799999999999999997654 3333
Q ss_pred CCCcccccc-------------ccccceeeecCCCCceeeeecCCCcc--CCCCCChHHHHHHHH----HHHhhhh--CC
Q 020492 87 EDGYFVYDS-------------GSKIDVWIQKADGTPFIGEVWPGPCV--FPDYTQSKVRSWWGS----LVKDFIY--NG 145 (325)
Q Consensus 87 ~~~~~~~~~-------------~~~~~~~~~~~~g~~~~~~~w~g~~~--~~Df~~p~a~~w~~~----~~~~~~~--~G 145 (325)
+.. .|+. ....++|.-+.+|. + ..|.|... -+|+.||+++++..+ .++..++ .|
T Consensus 254 ~~~--~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~-~--~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~Wl~~~~g 328 (598)
T PRK10785 254 SHP--WFDRHNRGTGGACHHPDSPWRDWYSFSDDGR-A--LDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRHWLKAPYN 328 (598)
T ss_pred CCH--HHHHhhccccccccCCCCCcceeeEECCCCC-c--CCcCCCCcCccccCCCHHHHHHHHhhhhHHHHHhhcCCCC
Confidence 321 1211 11224554444332 1 24544433 356889999998774 6777776 49
Q ss_pred ccEEEecCC
Q 020492 146 VDGIWNDMN 154 (325)
Q Consensus 146 vdg~~~D~~ 154 (325)
||||-+|..
T Consensus 329 iDG~RlDva 337 (598)
T PRK10785 329 IDGWRLDVV 337 (598)
T ss_pred CcEEEEecH
Confidence 999999976
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0069 Score=60.42 Aligned_cols=134 Identities=19% Similarity=0.324 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCCC-----c--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMDG-----F--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-----~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
.+-..|.+.++.+++.|+ ++|||-+-+... + .+ +.+|+ +|. +++.+++.+|++|+|+++-+.| ++
T Consensus 24 G~~~gi~~~l~yl~~lG~--~~i~l~Pi~~~~~~~~gY~~~d~~~id~-~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~ 100 (543)
T TIGR02403 24 GDLRGIIEKLDYLKKLGV--DYIWLNPFYVSPQKDNGYDVSDYYAINP-LFGTMADFEELVSEAKKRNIKIMLDMVFNHT 100 (543)
T ss_pred cCHHHHHHhHHHHHHcCC--CEEEECCcccCCCCCCCCCccccCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 355677777888877665 889988665432 1 12 34454 354 4789999999999999997665 34
Q ss_pred ccCCCccccccc-----cccceeeec-CCCCc---ee----eeecCC--------------CccCCCCCChHHHHHHHHH
Q 020492 85 KHEDGYFVYDSG-----SKIDVWIQK-ADGTP---FI----GEVWPG--------------PCVFPDYTQSKVRSWWGSL 137 (325)
Q Consensus 85 ~~~~~~~~~~~~-----~~~~~~~~~-~~g~~---~~----~~~w~g--------------~~~~~Df~~p~a~~w~~~~ 137 (325)
+.+.. -+.++ .-.++|+-. ..|.+ +. +..|.. ...-+|+.||++++...+.
T Consensus 101 ~~~~~--~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~~i~~~ 178 (543)
T TIGR02403 101 STEHE--WFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVREELKDV 178 (543)
T ss_pred ccchH--HHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHHHHHHH
Confidence 33221 11111 112333221 11111 00 111221 1224788999999999999
Q ss_pred HHhhhhCCccEEEecCCC
Q 020492 138 VKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 138 ~~~~~~~Gvdg~~~D~~e 155 (325)
++.+++.|||||-+|...
T Consensus 179 ~~~W~~~giDGfRlDa~~ 196 (543)
T TIGR02403 179 VNFWRDKGVDGFRLDVIN 196 (543)
T ss_pred HHHHHHcCCCEEEEeeeh
Confidence 998888999999999763
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0063 Score=61.53 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceeee-cCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWIQ-KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.+|++|++|++-+.+ +..... ...|+. ...+++.+ +.+|.... +.|-..-++..+|+++++..+.+
T Consensus 230 efk~lV~~~H~~Gi~VilDvV~NH~~~~~-~~~f~~-~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~v~~~i~~~~ 304 (605)
T TIGR02104 230 ELKQMIQALHENGIRVIMDVVYNHTYSRE-ESPFEK-TVPGYYYRYNEDGTLSN---GTGVGNDTASEREMMRKFIVDSV 304 (605)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCCccCCC-CCcccC-CCCCeeEEECCCCCccC---CCcccCCcccCCHHHHHHHHHHH
Confidence 4899999999999999997654 332211 123332 22345543 44443211 11112246788999999999999
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+..++ .|||||-+|..
T Consensus 305 ~~W~~e~~iDGfR~D~~ 321 (605)
T TIGR02104 305 LYWVKEYNIDGFRFDLM 321 (605)
T ss_pred HHHHHHcCCCEEEEech
Confidence 88875 89999999965
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.01 Score=60.02 Aligned_cols=128 Identities=16% Similarity=0.141 Sum_probs=75.4
Q ss_pred CHHHHHHH-HHHHHhcCCCceEEEEecccC----CCc-----eeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREI-CRTFREKGIPCDVIWMDIDYM----DGF-----RCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~-~~~~~~~~iP~d~i~iD~~w~----~~~-----~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..+.+- ++.++++|| .+|+|-+-.. ..+ ..|..+ .+|. ++++||+.+|++|++|++-+.+ +
T Consensus 154 ~~~~i~~~l~dyl~~LGv--t~i~L~Pi~e~~~~~~wGY~~~~y~~~~-~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH 230 (613)
T TIGR01515 154 SYRELADQLIPYVKELGF--THIELLPVAEHPFDGSWGYQVTGYYAPT-SRFGTPDDFMYFVDACHQAGIGVILDWVPGH 230 (613)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccC
Confidence 34444444 477788776 6677643211 011 124443 3666 4799999999999999998765 4
Q ss_pred cccCCC-ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 84 IKHEDG-YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 84 i~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+..+.. ...|+ ...-++..++.. . ....|. ..-+|+.+|+++++..+.++.+++ .|||||-+|..
T Consensus 231 ~~~~~~~~~~~~--~~~~y~~~~~~~-~-~~~~w~--~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG~R~D~v 297 (613)
T TIGR01515 231 FPKDDHGLAEFD--GTPLYEHKDPRD-G-EHWDWG--TLIFDYGRPEVRNFLVANALYWAEFYHIDGLRVDAV 297 (613)
T ss_pred cCCccchhhccC--CCcceeccCCcc-C-cCCCCC--CceecCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCH
Confidence 433221 11111 001111111110 0 011232 234799999999999999998885 79999999974
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.027 Score=57.37 Aligned_cols=127 Identities=20% Similarity=0.213 Sum_probs=73.8
Q ss_pred HHHH-HHHHHHHhcCCCceEEEEecccCC------Cc---eeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 20 KRVR-EICRTFREKGIPCDVIWMDIDYMD------GF---RCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 20 ~~v~-~~~~~~~~~~iP~d~i~iD~~w~~------~~---~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
..+. ++++.++++|+ ++|+|-+=+.. ++ .-|..++ +|- +++.||+.+|++|++|++-+.| +..
T Consensus 170 ~~~~~~ll~yl~~LGv--~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~-~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~ 246 (633)
T PRK12313 170 RELADELIPYVKEMGY--THVEFMPLMEHPLDGSWGYQLTGYFAPTS-RYGTPEDFMYLVDALHQNGIGVILDWVPGHFP 246 (633)
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCchhcCCCCCCCCCCCcCcCcCCC-CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 4444 34688888886 66776532211 11 1233433 454 3699999999999999997665 333
Q ss_pred cCCC-ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 86 HEDG-YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
.+.. ...|+. ...+...++.. .+ ...|.. .-+|+.||+++++..+.++..++ .|||||-+|...
T Consensus 247 ~~~~~~~~~~~--~~~~~~~~~~~-~~-~~~w~~--~~~n~~~~~vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 247 KDDDGLAYFDG--TPLYEYQDPRR-AE-NPDWGA--LNFDLGKNEVRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred CCcccccccCC--CcceeecCCCC-Cc-CCCCCC--cccCCCCHHHHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 2221 011110 00111111111 10 112322 34799999999999999988876 699999999754
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.05 Score=53.48 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=28.9
Q ss_pred CCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 123 PDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 123 ~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
+|..||++++...+.++.+++ .|||||-+|...
T Consensus 203 Ln~~np~V~~~l~~~~~~w~~~~giDGfRlDavk 236 (479)
T PRK09441 203 IDFRHPEVREELKYWAKWYMETTGFDGFRLDAVK 236 (479)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEhhhc
Confidence 567789999999999998887 899999999754
|
|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.012 Score=59.72 Aligned_cols=91 Identities=15% Similarity=0.181 Sum_probs=59.4
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccC---CCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHE---DGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~ 136 (325)
++++||+.+|++|++|++-+.. +.... ..+..++......++..+.+|.. ..|.+-..-+++.+|+++++..+
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~~---~~~~g~g~~ln~~~p~Vr~~iid 319 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSLRGIDNRSYYWIREDGDY---HNWTGCGNTLNLSHPAVVDWAID 319 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhcccCCCccceEECCCCCc---CCCCCccCcccCCCHHHHHHHHH
Confidence 4899999999999999987653 33211 11111221122344444444431 12433334578999999999999
Q ss_pred HHHhhhh-CCccEEEecCC
Q 020492 137 LVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 137 ~~~~~~~-~Gvdg~~~D~~ 154 (325)
.++..++ .|||||-+|..
T Consensus 320 ~l~~W~~e~gVDGFRfD~a 338 (658)
T PRK03705 320 CLRYWVETCHVDGFRFDLA 338 (658)
T ss_pred HHHHHHHHhCCCEEEEEcH
Confidence 9998886 79999999964
|
|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.067 Score=51.19 Aligned_cols=131 Identities=15% Similarity=0.120 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecccCC--Cc----ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cc-ccC
Q 020492 20 KRVREICRTFREKGIPCDVIWMDIDYMD--GF----RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GI-KHE 87 (325)
Q Consensus 20 ~~v~~~~~~~~~~~iP~d~i~iD~~w~~--~~----~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i-~~~ 87 (325)
..|.+-++.+++.|| ++|||-+-... .. .+ +..| .+|.. ++.||+.+|++|+|+++-+.+ +. ...
T Consensus 29 ~~i~~kl~~l~~lG~--t~iwl~P~~~~~~~~GY~~~d~y~~~-~~~Gt~~el~~li~~~h~~gi~vi~D~V~NH~~g~~ 105 (401)
T PLN02361 29 RNLEGKVPDLAKSGF--TSAWLPPPSQSLAPEGYLPQNLYSLN-SAYGSEHLLKSLLRKMKQYNVRAMADIVINHRVGTT 105 (401)
T ss_pred HHHHHHHHHHHHcCC--CEEEeCCCCcCCCCCCCCcccccccC-cccCCHHHHHHHHHHHHHcCCEEEEEEccccccCCC
Confidence 677788888888886 88988765432 11 12 3444 46764 799999999999999986543 11 111
Q ss_pred ----CCcccccccccccee---ee-cCCCC--ceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 88 ----DGYFVYDSGSKIDVW---IQ-KADGT--PFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 88 ----~~~~~~~~~~~~~~~---~~-~~~g~--~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
..|..|+. ...++- +. +..|. .-.+..+++ ..-+|.+||++++...+.++.+.+ .|||||-+|...
T Consensus 106 ~~~~~~y~~~~g-~~~~wd~~~~~~~~~g~~~~~~~~~~~~-lpDLd~~np~Vr~~l~~~~~wl~~~~GiDGfRlDavk 182 (401)
T PLN02361 106 QGHGGMYNRYDG-IPLPWDEHAVTSCTGGLGNRSTGDNFNG-VPNIDHTQHFVRKDIIGWLIWLRNDVGFQDFRFDFAK 182 (401)
T ss_pred CCCCCCcccCCC-CcCCCCccccccccCCCCCccCCCCCcc-CCccCCCCHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 11112211 000110 00 00010 000111111 223678899999999998887765 899999999753
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.086 Score=54.50 Aligned_cols=133 Identities=19% Similarity=0.197 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecccCC----Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccccC-
Q 020492 20 KRVREICRTFREKGIPCDVIWMDIDYMD----GF--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIKHE- 87 (325)
Q Consensus 20 ~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~~~- 87 (325)
..|.+-++.+++.|| ++|||-+-... +| .+ |+.| .+|- +++.||+.+|++|+++++-+.+ +....
T Consensus 521 ~~I~ekldyL~~LG~--taIWLpP~~~s~s~~GY~p~D~y~ld-s~yGT~~ELk~LI~a~H~~GIkVIlDiViNH~ag~f 597 (894)
T PLN02784 521 MELGEKAAELSSLGF--TVVWLPPPTESVSPEGYMPKDLYNLN-SRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRCAHF 597 (894)
T ss_pred HHHHHHHHHHHHhCC--CEEEeCCCCCCCCCCCcCcccccccC-cCcCCHHHHHHHHHHHHHCCCEEEEEECcccccccc
Confidence 567788888888886 78988764421 12 12 4455 4666 4799999999999999986543 22110
Q ss_pred ----CCccccccccccceeeecCCCCceee--eecCCC----ccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCC
Q 020492 88 ----DGYFVYDSGSKIDVWIQKADGTPFIG--EVWPGP----CVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 88 ----~~~~~~~~~~~~~~~~~~~~g~~~~~--~~w~g~----~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e 155 (325)
..+..|....+-+-.....+...|.+ ..+.|. ..-+|.+||++++-..+.++.+. +.|||||-+|+.-
T Consensus 598 ~~~~g~~~~f~g~~dW~d~~i~~ddp~F~GrG~~~sgddf~~lPDLDh~npeVR~eL~~WlkWL~~e~G~DGfRLDaVK 676 (894)
T PLN02784 598 QNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWMRKEVGYDGWRLDFVR 676 (894)
T ss_pred cCCCCcccccCCeecCCCCcccCCCcccCCcCCcCcccccCcCCcCCCCCHHHHHHHHHHHHHHHhccCCCEEEEeccC
Confidence 11111110000000000000001111 111111 22477889999998888888776 5899999999874
|
|
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.027 Score=57.73 Aligned_cols=93 Identities=14% Similarity=0.141 Sum_probs=58.1
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCC---ccccccccccceeeecCCC-CceeeeecCCCccCCCCCChHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDG---YFVYDSGSKIDVWIQKADG-TPFIGEVWPGPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~---~~~~~~~~~~~~~~~~~~g-~~~~~~~w~g~~~~~Df~~p~a~~w~~ 135 (325)
++++||+.+|++|++|++-+.. +...... ...++......++..+++. ..+. .+.|-..-+|+.+|+++++..
T Consensus 246 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~~~~~~~--~~~g~gn~ln~~~p~vr~~i~ 323 (688)
T TIGR02100 246 EFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDNASYYRLQPDDKRYYI--NDTGTGNTLNLSHPRVLQMVM 323 (688)
T ss_pred HHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCCCcceEecCCCCceec--CCCCccccccCCCHHHHHHHH
Confidence 4799999999999999997654 3322110 0111111112333333331 1121 122333358999999999999
Q ss_pred HHHHhhh-hCCccEEEecCCC
Q 020492 136 SLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 136 ~~~~~~~-~~Gvdg~~~D~~e 155 (325)
+.++.++ +.|||||-+|...
T Consensus 324 d~l~~W~~e~gIDGfR~D~a~ 344 (688)
T TIGR02100 324 DSLRYWVTEMHVDGFRFDLAT 344 (688)
T ss_pred HHHHHHHHHcCCcEEEEechh
Confidence 9999887 4899999999753
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.088 Score=54.47 Aligned_cols=127 Identities=16% Similarity=0.198 Sum_probs=73.3
Q ss_pred CHHHHHHH-HHHHHhcCCCceEEEEecccCC------Cc---eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREI-CRTFREKGIPCDVIWMDIDYMD------GF---RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~-~~~~~~~~iP~d~i~iD~~w~~------~~---~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..+.+- ++.++++|+ .+|+|-+=... ++ .-|.+++ +|-. ++.||+.+|++|++|++-+.| +
T Consensus 263 ~~~~i~~~l~~ylk~LGv--~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~-~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH 339 (726)
T PRK05402 263 SYRELADQLIPYVKEMGF--THVELLPIAEHPFDGSWGYQPTGYYAPTS-RFGTPDDFRYFVDACHQAGIGVILDWVPAH 339 (726)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 43445444 577888886 66766532210 11 1233433 4543 689999999999999997665 3
Q ss_pred cccCCC-ccccccccccceeeecCC-CCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 84 IKHEDG-YFVYDSGSKIDVWIQKAD-GTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 84 i~~~~~-~~~~~~~~~~~~~~~~~~-g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
...+.. ...|+ + ..-+...++. +. ...|.+ ..+|+.||++++...+.++..++ .|||||-+|..
T Consensus 340 ~~~~~~~~~~~~-~-~~~y~~~~~~~~~---~~~w~~--~~~n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 340 FPKDAHGLARFD-G-TALYEHADPREGE---HPDWGT--LIFNYGRNEVRNFLVANALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred CCCCccchhccC-C-CcceeccCCcCCc---cCCCCC--ccccCCCHHHHHHHHHHHHHHHHHhCCcEEEECCH
Confidence 322211 00111 0 0011111110 10 012322 24799999999999999988875 79999999964
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.05 Score=55.86 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=79.3
Q ss_pred HHHHHHHHHhcCCCceEEEEecccC----CCc-----eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccccCC
Q 020492 22 VREICRTFREKGIPCDVIWMDIDYM----DGF-----RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKHED 88 (325)
Q Consensus 22 v~~~~~~~~~~~iP~d~i~iD~~w~----~~~-----~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~~~ 88 (325)
+.+.++.+++.|+ ++|++=+=+. ..+ .-|..+ .+|.. ++.||+.+|++|++|++-+.+ ++..+.
T Consensus 253 ~~~~L~ylk~LG~--t~I~LmPi~e~~~~~~wGY~~~~~fa~~-~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~ 329 (758)
T PLN02447 253 ADDVLPRIKALGY--NAVQLMAIQEHAYYGSFGYHVTNFFAVS-SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNT 329 (758)
T ss_pred HHHHHHHHHHcCC--CEEEECCccccCCCCCCCcCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEeccccccccc
Confidence 3567888888886 5665532111 111 123443 36654 699999999999999997665 333221
Q ss_pred --CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCCCCc
Q 020492 89 --GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNEPAV 158 (325)
Q Consensus 89 --~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e~~~ 158 (325)
+...|+ +....+|-.++.|. ...|. ...+|+.+++++++..+.++..++ .+||||-+|.-....
T Consensus 330 ~~gl~~fD-g~~~~Yf~~~~~g~---~~~w~--~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~sml 396 (758)
T PLN02447 330 LDGLNGFD-GTDGSYFHSGPRGY---HWLWD--SRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSML 396 (758)
T ss_pred cccccccC-CCCccccccCCCCC---cCcCC--CceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhh
Confidence 111232 22234443332221 11232 335899999999999999998886 799999999865443
|
|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.026 Score=61.39 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCcc---ccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYF---VYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~ 136 (325)
++++||+.+|++|++||+-+.+ +......+. .+.......|+..++ +.+..-..|.|....+|+.+|+++++..+
T Consensus 248 efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~-~~~~~y~~~~G~gn~~n~~~p~v~~~i~d 326 (1221)
T PRK14510 248 EFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEP-GNPKEYENWWGCGNLPNLERPFILRLPMD 326 (1221)
T ss_pred HHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecC-CCCCcccCCCCCCCccccCCHHHHHHHHH
Confidence 4799999999999999997654 332221110 011111122332221 11111123445555689999999999999
Q ss_pred HHHhhhhCCccEEEecCC
Q 020492 137 LVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 137 ~~~~~~~~Gvdg~~~D~~ 154 (325)
.++..++.|||||-+|..
T Consensus 327 ~lr~Wv~~gVDGfRfDla 344 (1221)
T PRK14510 327 VLRSWAKRGVDGFRLDLA 344 (1221)
T ss_pred HHHHHHHhCCCEEEEech
Confidence 999888899999999954
|
|
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.069 Score=52.39 Aligned_cols=133 Identities=23% Similarity=0.317 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC---Cce----ee-eecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD---GFR----CF-TFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~---~~~----~f-~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
.+-.-|.+-++.+++.|+ ++|||-+-... ..+ ++ ..|+ .|. |++++++.+|++|+|+++-+.. ..
T Consensus 26 Gdl~Gi~~~LdYl~~LGv--~aiwl~Pi~~s~~~~~gY~~~Dy~~id~-~~Gt~~d~~~li~~~H~~gi~vi~D~V~NH~ 102 (505)
T COG0366 26 GDLKGITEKLDYLKELGV--DAIWLSPIFESPQADHGYDVSDYTKVDP-HFGTEEDFKELVEEAHKRGIKVILDLVFNHT 102 (505)
T ss_pred ccHHhHHHhhhHHHHhCC--CEEEeCCCCCCCccCCCccccchhhcCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 355667788888888876 89998865543 122 22 2333 555 4689999999999999986542 11
Q ss_pred ccCCCccccccc---c---c-cceeee-c--------------CCCCc--------eeeeecCCCccCCCCCChHHHHHH
Q 020492 85 KHEDGYFVYDSG---S---K-IDVWIQ-K--------------ADGTP--------FIGEVWPGPCVFPDYTQSKVRSWW 134 (325)
Q Consensus 85 ~~~~~~~~~~~~---~---~-~~~~~~-~--------------~~g~~--------~~~~~w~g~~~~~Df~~p~a~~w~ 134 (325)
+.+.. -+.++ . . .++++- + ..|.. +..........-+++.||+++++.
T Consensus 103 s~~~~--~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~ 180 (505)
T COG0366 103 SDEHP--WFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLHLFSSEQPDLNWENPEVREEL 180 (505)
T ss_pred CCccH--HHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEEecCCCCCCcCCCCHHHHHHH
Confidence 11111 01100 0 0 123221 0 01111 111111111223789999999999
Q ss_pred HHHHHhhhhCCccEEEecCC
Q 020492 135 GSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 135 ~~~~~~~~~~Gvdg~~~D~~ 154 (325)
.+.++..++.|||||-+|.-
T Consensus 181 ~~~~~~W~~~gvDGfRlDa~ 200 (505)
T COG0366 181 LDVVKFWLDKGVDGFRLDAA 200 (505)
T ss_pred HHHHHHHHHcCCCeEEeccH
Confidence 88999888999999999975
|
|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.047 Score=50.39 Aligned_cols=103 Identities=17% Similarity=0.257 Sum_probs=64.4
Q ss_pred CceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCcccc-ccc---cccceeeecCCCCc
Q 020492 35 PCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVY-DSG---SKIDVWIQKADGTP 110 (325)
Q Consensus 35 P~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~-~~~---~~~~~~~~~~~g~~ 110 (325)
++|.+++|..--+. +...|. ++-++.||+.|.+++-+++- +.-+.+..| ++. ..+.++...
T Consensus 64 ~~d~vVID~~~~g~------~~~~fs--~~~i~~Lk~~g~~viaYlSv--Ge~E~~R~y~~~~~~~~~~~~l~~~----- 128 (315)
T TIGR01370 64 PFELVVIDYSKDGT------EDGTYS--PEEIVRAAAAGRWPIAYLSI--GAAEDYRFYWQKGWKVNAPAWLGNE----- 128 (315)
T ss_pred CCCEEEEccccccC------cccCCC--HHHHHHHHhCCcEEEEEEEc--hhccccchhhhhhhhcCCHHHhCCC-----
Confidence 57889999653211 111232 46788999999998877652 221111111 110 111222211
Q ss_pred eeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 111 FIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 111 ~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
...|+|. .++|+.+|+-++...+.++.+.+.|+||+-+|.-+
T Consensus 129 --n~~W~g~-~~vd~~~~~W~~il~~rl~~l~~kGfDGvfLD~lD 170 (315)
T TIGR01370 129 --DPDWPGN-YDVKYWDPEWKAIAFSYLDRVIAQGFDGVYLDLID 170 (315)
T ss_pred --CCCCCCc-eeEecccHHHHHHHHHHHHHHHHcCCCeEeeccch
Confidence 1247765 57899999988888888888889999999999654
|
Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. |
| >PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.072 Score=52.97 Aligned_cols=203 Identities=17% Similarity=0.210 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCCc-eeeeec----CCCCCC----------hHHHHHHHHHCCCEEEeeeCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDGF-RCFTFD----KERFPD----------PKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~-~~f~~d----~~~FPd----------~~~~~~~L~~~G~k~~~~~~P 82 (325)
+.++..+.++.+.+..|. ++.. .+|+-.+ ..+--+ ...|+| .++.|+.+|+.|++.+.+.--
T Consensus 116 ~~~~~~~~i~~L~~yHIN--~~QF-YDW~~rH~~Pl~~~~~~~~~~w~D~~~r~i~~~~Vk~yI~~ah~~Gmkam~Ynmi 192 (559)
T PF13199_consen 116 SAEDIEAEIDQLNRYHIN--GLQF-YDWMYRHHKPLPGTNGQPDQTWTDWANRQISTSTVKDYINAAHKYGMKAMAYNMI 192 (559)
T ss_dssp GHHHHHHHHHHHHHTT----EEEE-TS--SBTTB-S-SSS-EEE-TT-TTT--EEEHHHHHHHHHHHHHTT-EEEEEEES
T ss_pred CchhHHHHHHHHHhhCcC--eEEE-EeeccccCCcCCCCCCchhhhhhhhcCCEehHHHHHHHHHHHHHcCcceehhHhh
Confidence 568889999999998875 3332 2454211 001000 123433 489999999999999987543
Q ss_pred ccccCCCccccccccccceee-ecCCCCc---e-eeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCCC
Q 020492 83 GIKHEDGYFVYDSGSKIDVWI-QKADGTP---F-IGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNEP 156 (325)
Q Consensus 83 ~i~~~~~~~~~~~~~~~~~~~-~~~~g~~---~-~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e~ 156 (325)
+-.. +++ ...++.+.+.+ +++.+.. + .+..|+..-.+.|..|++=++++.+++++.++ .|||||-+|.=-.
T Consensus 193 yaa~-~~~--~~~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~yI~~q~~~~~~~~gFDG~hlDq~G~ 269 (559)
T PF13199_consen 193 YAAN-NNY--EEDGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNYIINQMNKAIQNFGFDGWHLDQLGN 269 (559)
T ss_dssp SEEE-TT----S--SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHHHHHHHHHHHHHHT--EEEEE-S--
T ss_pred hccc-cCc--ccccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHHHHHHHHHHHHccCCceEeeeccCC
Confidence 3222 211 12234444433 3333321 1 12335555678899999999999999887776 8999999995210
Q ss_pred CccCCCCCCCCCCCccCCCCCCCcccccc-cccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCC--------c--
Q 020492 157 AVFKSVTKTMPESNIHRGDDEIGGCQNHS-YYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQ--------R-- 225 (325)
Q Consensus 157 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~-~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~q--------r-- 225 (325)
. ...... +|. .. .+...|.-+. +++++..+++ ++++.--+.-|+. -
T Consensus 270 ~----------~~~~d~-----~G~--~i~~l~~~y~~Fi-----~~~K~~~~~k-~lv~N~V~~~g~~~~a~~~~~d~l 326 (559)
T PF13199_consen 270 R----------GTVYDY-----DGN--KIYDLSDGYASFI-----NAMKEALPDK-YLVFNAVSGYGIEQIAKTSKVDFL 326 (559)
T ss_dssp E----------EEEGGT-----T-----GGECHHHHHHHH-----HHHHHHSTTS-EEEEB-GGGTTHHHHTT-S--SSE
T ss_pred C----------CccccC-----CCC--CchhhHHHHHHHH-----HHHHHhCCCC-ceeeeccCccchhhhhccccccee
Confidence 0 000000 010 11 3344554432 2333443343 4666543332322 1
Q ss_pred ceeeecCCCCCCchHHHHHHHHHHHc
Q 020492 226 YAATWTGDNVSNWEHLHMSISMVLQL 251 (325)
Q Consensus 226 ~~~~w~GD~~s~W~~L~~~i~~~l~~ 251 (325)
|.=+| +...+...|+..|.+.=..
T Consensus 327 Y~EvW--~~~~~Y~~Lk~~i~~~r~~ 350 (559)
T PF13199_consen 327 YNEVW--DDYDTYGDLKRIIDQNRKY 350 (559)
T ss_dssp EEE----SBS-BHHHHHHHHHHHHHH
T ss_pred eeecc--cccccHHHHHHHHHHHhhh
Confidence 23378 6677788898888776555
|
|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.06 Score=57.62 Aligned_cols=86 Identities=22% Similarity=0.232 Sum_probs=59.2
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceee-ecCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWI-QKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.||++|++|++-+-+ +..... .|+. ...+|+. .+.+|.+.. .++|. -++..+|.++++..+.+
T Consensus 556 EfK~LV~alH~~GI~VILDVVyNHt~~~~---~f~~-~~p~Yy~~~~~~G~~~~--~~~g~--~l~~e~~~vrk~iiDsl 627 (1111)
T TIGR02102 556 EFKNLINEIHKRGMGVILDVVYNHTAKVY---IFED-LEPNYYHFMDADGTPRT--SFGGG--RLGTTHEMSRRILVDSI 627 (1111)
T ss_pred HHHHHHHHHHHCCCEEEEecccccccccc---cccc-cCCCceEeeCCCCCccc--ccCCC--CCCcCCHHHHHHHHHHH
Confidence 4799999999999999987654 332222 3432 2344543 344555432 23332 37888999999999999
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+.+++ .|||||-+|..
T Consensus 628 ~yWv~ey~VDGFRfDl~ 644 (1111)
T TIGR02102 628 KYLVDEFKVDGFRFDMM 644 (1111)
T ss_pred HHHHHhcCCcEEEEecc
Confidence 88875 89999999964
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.17 Score=52.56 Aligned_cols=131 Identities=18% Similarity=0.198 Sum_probs=77.9
Q ss_pred CHHHHH-HHHHHHHhcCCCceEEEEecccC----C--Cc---eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVR-EICRTFREKGIPCDVIWMDIDYM----D--GF---RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~-~~~~~~~~~~iP~d~i~iD~~w~----~--~~---~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
|-..+. +.++-++++|+ .+|++=+=.. . ++ .-|..+ .+|-. ++.||+.+|++|++|++-+.| +
T Consensus 414 tf~~~~e~~LdYLk~LGv--t~IeLmPv~e~~~~~swGY~~~~yfa~~-~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH 490 (897)
T PLN02960 414 SFKEFTQKVLPHVKKAGY--NAIQLIGVQEHKDYSSVGYKVTNFFAVS-SRFGTPDDFKRLVDEAHGLGLLVFLDIVHSY 490 (897)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCcc-cccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 444554 56888888886 5565532110 0 11 123333 24443 689999999999999997665 4
Q ss_pred cccCCC--ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCCCC
Q 020492 84 IKHEDG--YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNEPA 157 (325)
Q Consensus 84 i~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e~~ 157 (325)
+..+.. ...|+ +....++-.+..| ....| |. ..+|+.+|+++++..+.++..++ .+||||-+|.-...
T Consensus 491 ~~~d~~~~L~~FD-G~~~~Yf~~~~~g---~~~~W-G~-~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sM 561 (897)
T PLN02960 491 AAADEMVGLSLFD-GSNDCYFHSGKRG---HHKRW-GT-RMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSM 561 (897)
T ss_pred cCCccccchhhcC-CCccceeecCCCC---ccCCC-CC-cccCCCCHHHHHHHHHHHHHHHHHHCCCceeeccccee
Confidence 433321 11232 1111223222112 12235 22 45799999999999999988774 79999999976543
|
|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.1 Score=56.44 Aligned_cols=125 Identities=16% Similarity=0.171 Sum_probs=72.7
Q ss_pred HHHHHHHHHhcCCCceEEEEec--------ccC-CCceeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccccCC
Q 020492 22 VREICRTFREKGIPCDVIWMDI--------DYM-DGFRCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKHED 88 (325)
Q Consensus 22 v~~~~~~~~~~~iP~d~i~iD~--------~w~-~~~~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~~~ 88 (325)
+.++++-+++.|+ .+|++=+ .|- ...+.|..+ .+|-. ++.||+.+|++|++||+-+.| +...+.
T Consensus 768 ~~~lldYlk~LGv--t~IeLmPv~e~p~~~swGY~~~~y~ap~-~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~ 844 (1224)
T PRK14705 768 AKELVDYVKWLGF--THVEFMPVAEHPFGGSWGYQVTSYFAPT-SRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDS 844 (1224)
T ss_pred HHHHHHHHHHhCC--CEEEECccccCCCCCCCCCCccccCCcC-cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcch
Confidence 3455788888886 5565432 120 011223333 35654 689999999999999997665 333221
Q ss_pred C-ccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 89 G-YFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 89 ~-~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
. ...|+ ...+....+...-....|.. ..+|+.+++++++..+.++..++ .+||||-+|.-.
T Consensus 845 ~~l~~fd----g~~~y~~~d~~~g~~~~Wg~--~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~ 907 (1224)
T PRK14705 845 WALAQFD----GQPLYEHADPALGEHPDWGT--LIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAVA 907 (1224)
T ss_pred hhhhhcC----CCcccccCCcccCCCCCCCC--ceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeehh
Confidence 0 00111 11111111111001123432 34799999999999999888775 799999999854
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.19 Score=51.57 Aligned_cols=123 Identities=14% Similarity=0.194 Sum_probs=71.8
Q ss_pred HHHHHHHHhcCCCceEEEEecc--------cC-CCceeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccccCC-
Q 020492 23 REICRTFREKGIPCDVIWMDID--------YM-DGFRCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKHED- 88 (325)
Q Consensus 23 ~~~~~~~~~~~iP~d~i~iD~~--------w~-~~~~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~~~- 88 (325)
.++++.++++|+ ..|++-+= |- ...+.|..+ .+|.. ++.||+.+|++|++|++-+.| ++..+.
T Consensus 273 ~~ll~ylk~LGv--t~I~LmPi~e~~~~~~wGY~~~~~~a~~-~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~ 349 (730)
T PRK12568 273 EQLIPYVQQLGF--THIELLPITEHPFGGSWGYQPLGLYAPT-ARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAH 349 (730)
T ss_pred HHHHHHHHHcCC--CEEEECccccCCCCCCCCCCCCcCCccC-cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcccc
Confidence 345677888886 55654321 20 011234444 36664 689999999999999997665 333321
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+...|+. ..++ ..++...-....|. ...+|+.+|+++++..+.++..++ .|||||-+|.-
T Consensus 350 ~l~~fdg---~~~Y-e~~d~~~g~~~~W~--~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAv 410 (730)
T PRK12568 350 GLAQFDG---AALY-EHADPREGMHRDWN--TLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAV 410 (730)
T ss_pred ccccCCC---cccc-ccCCCcCCccCCCC--CeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCH
Confidence 1111210 0111 11111000112332 224799999999999998888775 79999999964
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.082 Score=53.83 Aligned_cols=90 Identities=18% Similarity=0.164 Sum_probs=61.4
Q ss_pred ChHHHHHHHHHCCCEEEeeeC-Ccccc--C-CCccccccccccce-eeecCCCCceeeeecCCCccCCCCCChHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLD-PGIKH--E-DGYFVYDSGSKIDV-WIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~-P~i~~--~-~~~~~~~~~~~~~~-~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~ 135 (325)
.+|.||+.||+.|+.||+-|- .+... . .+-..|+ +.++.+ +..+++|.. . .+.|.+.-+..++|-+++|.-
T Consensus 266 EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t~~f~-~id~~~Yyr~~~dg~~-~--N~TGcGNtln~~hpmvrk~iv 341 (697)
T COG1523 266 EFKDMVKALHKAGIEVILDVVFNHTAEGNELGPTLSFR-GIDPNYYYRLDPDGYY-S--NGTGCGNTLNTEHPMVRKLIV 341 (697)
T ss_pred HHHHHHHHHHHcCCEEEEEEeccCcccccCcCcccccc-cCCcCceEEECCCCCe-e--cCCccCcccccCChHHHHHHH
Confidence 468999999999999998653 33311 0 1111232 455554 445666533 2 233444458889999999999
Q ss_pred HHHHhhhh-CCccEEEecCC
Q 020492 136 SLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 136 ~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+-|+.+++ .+||||-+|..
T Consensus 342 DsLrYWv~e~hVDGFRFDLa 361 (697)
T COG1523 342 DSLRYWVEEYHVDGFRFDLA 361 (697)
T ss_pred HHHHHHHHHhCCCceeecch
Confidence 99998885 89999999986
|
|
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.27 Score=50.30 Aligned_cols=63 Identities=14% Similarity=0.343 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----------------Cceeeeec----CCCCC---ChHHHHHHHHHCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----------------GFRCFTFD----KERFP---DPKSLAADLHLNG 73 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----------------~~~~f~~d----~~~FP---d~~~~~~~L~~~G 73 (325)
+-..|.+-++.+++.|| ++|||-+-+.. ..+.+..| ..+|- +++.||+.+|++|
T Consensus 228 dl~Gi~~kLdyl~~LGv--~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~G 305 (683)
T PRK09505 228 DLRGLTEKLDYLQQLGV--NALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRG 305 (683)
T ss_pred CHHHHHHhhHHHHHcCC--CEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCC
Confidence 45667788888888776 78887653321 11222222 13454 4799999999999
Q ss_pred CEEEeeeCC
Q 020492 74 FKAIWMLDP 82 (325)
Q Consensus 74 ~k~~~~~~P 82 (325)
+|+++-+.+
T Consensus 306 i~VilD~V~ 314 (683)
T PRK09505 306 IRILFDVVM 314 (683)
T ss_pred CEEEEEECc
Confidence 999987654
|
|
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.1 Score=47.13 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCCce--eeeecCCCC--CChHHHHHHHHHCCCEEEeeeC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDGFR--CFTFDKERF--PDPKSLAADLHLNGFKAIWMLD 81 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~--~f~~d~~~F--Pd~~~~~~~L~~~G~k~~~~~~ 81 (325)
|.+..++.|+-..++|+ +.+.+|.+|..... .+++- +.. .+++++++.-+++|+.+.+|.+
T Consensus 30 ~t~~~k~yIDfAa~~G~--eYvlvD~GW~~~~~~~~~d~~-~~~~~~dl~elv~Ya~~KgVgi~lw~~ 94 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGI--EYVLVDAGWYGWEKDDDFDFT-KPIPDFDLPELVDYAKEKGVGIWLWYH 94 (273)
T ss_dssp SHHHHHHHHHHHHHTT---SEEEEBTTCCGS--TTT--TT--B-TT--HHHHHHHHHHTT-EEEEEEE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEecccccccccccccccc-ccCCccCHHHHHHHHHHcCCCEEEEEe
Confidence 67888999999999998 56888999964111 11111 122 4679999999999999999965
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A. |
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.22 Score=50.68 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=69.6
Q ss_pred HHHHHHHHhcCCCceEEEEec--------ccCCC-ceeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccccCCC
Q 020492 23 REICRTFREKGIPCDVIWMDI--------DYMDG-FRCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKHEDG 89 (325)
Q Consensus 23 ~~~~~~~~~~~iP~d~i~iD~--------~w~~~-~~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~~~~ 89 (325)
.++++-++++|+. +|.+=+ .|-=+ ..-|..+ .+|-. ++.||+.+|++|++|++-+.| ++..+..
T Consensus 171 ~~l~~ylk~lG~t--~velmPv~e~~~~~~wGY~~~~~~~~~-~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~~~ 247 (639)
T PRK14706 171 HRLGEYVTYMGYT--HVELLGVMEHPFDGSWGYQVTGYYAPT-SRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTDES 247 (639)
T ss_pred HHHHHHHHHcCCC--EEEccchhcCCCCCCCCcCcccccccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccccCcchh
Confidence 3445777888863 343211 12000 1123443 35643 689999999999999997655 3332211
Q ss_pred c-cccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCC
Q 020492 90 Y-FVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 90 ~-~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e 155 (325)
. ..++ + ..-+...++... ....|. ...+|+.+|+++++..+.++..+ +.+||||-+|...
T Consensus 248 ~l~~~d-g-~~~y~~~~~~~g--~~~~w~--~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~ 309 (639)
T PRK14706 248 GLAHFD-G-GPLYEYADPRKG--YHYDWN--TYIFDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVA 309 (639)
T ss_pred hhhccC-C-CcceeccCCcCC--cCCCCC--CcccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeeh
Confidence 0 0111 0 000111111100 011232 23479999999999999998877 4899999999754
|
|
| >PLN03244 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.068 Score=54.64 Aligned_cols=91 Identities=20% Similarity=0.213 Sum_probs=59.1
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCC--CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHED--GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSL 137 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~ 137 (325)
+++.||+.+|++|++|++-+.+ +...+. +...|+ +....|+-.++.|. ...| |. ...|+.+++++++..+.
T Consensus 442 DLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fD-Gt~~~Yf~~~~~g~---~~~W-Gs-~~fnyg~~EVr~FLLsn 515 (872)
T PLN03244 442 DFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFD-GSNDCYFHTGKRGH---HKHW-GT-RMFKYGDLDVLHFLISN 515 (872)
T ss_pred HHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcC-CCccceeccCCCCc---cCCC-CC-ceecCCCHHHHHHHHHH
Confidence 3689999999999999997655 333322 111222 11212333222221 1245 33 45799999999999999
Q ss_pred HHhhh-hCCccEEEecCCCCC
Q 020492 138 VKDFI-YNGVDGIWNDMNEPA 157 (325)
Q Consensus 138 ~~~~~-~~Gvdg~~~D~~e~~ 157 (325)
++..+ +.+||||-+|.-.-.
T Consensus 516 a~yWleEyhIDGFRfDaVtSM 536 (872)
T PLN03244 516 LNWWITEYQIDGFQFHSLASM 536 (872)
T ss_pred HHHHHHHhCcCcceeecchhh
Confidence 98877 489999999976433
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.27 Score=49.13 Aligned_cols=121 Identities=16% Similarity=0.155 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC----CCce-----eeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM----DGFR-----CFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~~~~-----~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
+-..|.+-++.+++.|| .+|++-+=.. .+++ .|..+ .+|-. +++||+.+|++|+++++-+.+ ++
T Consensus 109 ~~~gi~~~l~yl~~LGv--~~i~L~Pi~~~~~~~~~GY~~~~~~~~~-~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~ 185 (542)
T TIGR02402 109 TFDAAIEKLPYLADLGI--TAIELMPVAQFPGTRGWGYDGVLPYAPH-NAYGGPDDLKALVDAAHGLGLGVILDVVYNHF 185 (542)
T ss_pred CHHHHHHhhHHHHHcCC--CEEEeCccccCCCCCCCCCCccCccccc-cccCCHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 44667777888888876 6676543211 0111 13333 34543 699999999999999997654 44
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCCh---HHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQS---KVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p---~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
..+..+. . .... +|-.+ . ...| |. -+|+.+| ++++++.+.++..++ .|||||-+|..
T Consensus 186 ~~~~~~~--~-~~~~-y~~~~-~-----~~~w-g~--~~n~~~~~~~~vr~~i~~~~~~W~~e~~iDGfR~D~~ 246 (542)
T TIGR02402 186 GPEGNYL--P-RYAP-YFTDR-Y-----STPW-GA--AINFDGPGSDEVRRYILDNALYWLREYHFDGLRLDAV 246 (542)
T ss_pred CCccccc--c-ccCc-cccCC-C-----CCCC-CC--ccccCCCcHHHHHHHHHHHHHHHHHHhCCcEEEEeCH
Confidence 3333211 0 0111 33211 1 1123 22 3799999 999999998888775 79999999965
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.37 Score=48.16 Aligned_cols=136 Identities=22% Similarity=0.264 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCC-------ceeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDG-------FRCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-------~~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
+..-|.+-++.+++.| ++++|+-+-.... ..++..=..+|. |++++++.+|+.|+++++-+-|.-..+
T Consensus 38 ~~~GI~~kldyi~~lG--~taiWisP~~~s~~~~~GY~~~d~~~l~p~fGt~edf~~Li~~~h~~gi~ii~D~viNh~~~ 115 (545)
T KOG0471|consen 38 DLKGITSKLDYIKELG--FTAIWLSPFTKSSKPDFGYDASDLEQLRPRFGTEEDFKELILAMHKLGIKIIADLVINHRSD 115 (545)
T ss_pred ccccchhhhhHHHhcC--CceEEeCCCcCCCHHHhccCccchhhhcccccHHHHHHHHHHHHhhcceEEEEeeccccCCc
Confidence 3445566666665555 5889887655332 223333235676 478999999999999998765533221
Q ss_pred C-Ccc---ccccccccceeeecCCC-----C---------ceeeeecC----------C----CccCCCCCChHHHHHHH
Q 020492 88 D-GYF---VYDSGSKIDVWIQKADG-----T---------PFIGEVWP----------G----PCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 88 ~-~~~---~~~~~~~~~~~~~~~~g-----~---------~~~~~~w~----------g----~~~~~Df~~p~a~~w~~ 135 (325)
+ ..+ ...+..-.+++.-++.+ + .+.+..|+ + ...-+|+.||++++-+.
T Consensus 116 ~~~wf~~~~~~~~~y~d~~~~~~~~~~~~g~~~~p~nw~~~~~~s~~~~~e~~~~~~l~~~~~~~pDln~~n~~V~~~~~ 195 (545)
T KOG0471|consen 116 EVEWFKASPTSKTGYEDWYPWHDGSSLDVGKRIPPLNWLSVFGGSAWPFDEGRQKYYLGQFAVLQPDLNYENPDVRKAIK 195 (545)
T ss_pred cccccccCccccccceeeeeccCcccccccCCCCccchHhhhccccCcccccccceeccchhhcCCCCCCCCHHHHHHHH
Confidence 0 000 01111111222222111 0 01112222 1 13347899999999999
Q ss_pred HHHH-hhhhCCccEEEecCCC
Q 020492 136 SLVK-DFIYNGVDGIWNDMNE 155 (325)
Q Consensus 136 ~~~~-~~~~~Gvdg~~~D~~e 155 (325)
+.++ ...+.||||+-+|...
T Consensus 196 ~~l~~~~~~~gvdGfRiD~v~ 216 (545)
T KOG0471|consen 196 EWLRDFWLEKGVDGFRIDAVK 216 (545)
T ss_pred HHHHHHHhhcCCCeEEEEccc
Confidence 9999 5667999999999874
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.18 Score=52.89 Aligned_cols=89 Identities=11% Similarity=0.024 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCC--ccccccccccceeeec-CCCCceeeeecCCCccCCCCCChHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDG--YFVYDSGSKIDVWIQK-ADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~--~~~~~~~~~~~~~~~~-~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~ 136 (325)
++++||+.||++|++|++-+-. +...... ...++. ..++||.+. .+|......++ .-.+..||.++++..+
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~-~~P~YY~r~~~~G~~~n~~~~----~d~a~e~~~Vrk~iiD 479 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDK-IVPGYYHRLNEDGGVENSTCC----SNTATEHRMMAKLIVD 479 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccCccCcccccc-cCcHhhEeeCCCCCeecCCCC----cCCCCCCHHHHHHHHH
Confidence 4789999999999999986543 3322110 012221 234555543 23432111111 1246789999999999
Q ss_pred HHHhhh-hCCccEEEecCC
Q 020492 137 LVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 137 ~~~~~~-~~Gvdg~~~D~~ 154 (325)
.++.++ +.|||||-+|.-
T Consensus 480 sl~~W~~ey~VDGFRfDlm 498 (898)
T TIGR02103 480 SLVVWAKDYKVDGFRFDLM 498 (898)
T ss_pred HHHHHHHHcCCCEEEEech
Confidence 998877 589999999964
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.48 Score=48.41 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD 47 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~ 47 (325)
+.+-|.+=++.+.+.|+|...++||++||.
T Consensus 237 ~p~GV~~Gv~~l~~gG~pprfvIIDDGWQs 266 (865)
T PLN02982 237 DPVGVWHGVKEFAEGGVPPRFLIIDDGWQS 266 (865)
T ss_pred CHHHHHHHHHHHhcCCCCccEEEEecchhh
Confidence 578999999999999999999999999984
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.34 Score=48.72 Aligned_cols=130 Identities=19% Similarity=0.249 Sum_probs=75.9
Q ss_pred CHHHHHHHHHHHHhcCCC------ceEEEEecccC-CCceeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIP------CDVIWMDIDYM-DGFRCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP------~d~i~iD~~w~-~~~~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-+-+.+.+..+++.||- +--+=.|-+|- ...+-|.. ..+|-. +|.+|+.+|++|+-|++-+-| .+..
T Consensus 163 ~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp-~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~ 241 (628)
T COG0296 163 YFELAIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAP-TSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPP 241 (628)
T ss_pred HHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccc-cccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCC
Confidence 457778899999999973 22222233331 12233444 457765 589999999999999996555 4554
Q ss_pred CCCcc-ccccccccceeeecCCCCceee--eecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCCC
Q 020492 87 EDGYF-VYDSGSKIDVWIQKADGTPFIG--EVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNEP 156 (325)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~--~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e~ 156 (325)
+..+. .|+ ...+....+ |..+ ..| ....-|+..+|+|.++.+.....+ +..|||+-+|.-.-
T Consensus 242 d~~~L~~fd----g~~~~e~~~--~~~~~~~~W--g~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV~s 307 (628)
T COG0296 242 DGNYLARFD----GTFLYEHED--PRRGEHTDW--GTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAVAS 307 (628)
T ss_pred CcchhhhcC----CccccccCC--cccccCCCc--ccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehhhh
Confidence 43211 111 111111111 1111 122 122334449999999877766555 48999999998643
|
|
| >COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.31 Score=43.62 Aligned_cols=108 Identities=23% Similarity=0.327 Sum_probs=67.6
Q ss_pred cCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCcccc----ccccccceeeecCC
Q 020492 32 KGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVY----DSGSKIDVWIQKAD 107 (325)
Q Consensus 32 ~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~----~~~~~~~~~~~~~~ 107 (325)
+.-|++.+++|++|.+..+ =|-.++=++.+++.|.+++-+++ |...++|..| -....++++.. .|
T Consensus 40 ~~~~f~llVVDps~~g~~~--------~~~~~eelr~~~~gg~~pIAYls--Ig~ae~yR~Ywd~~w~~~~p~wLg~-ed 108 (300)
T COG2342 40 LNSPFDLLVVDPSYCGPFN--------TPWTIEELRTKADGGVKPIAYLS--IGEAESYRFYWDKYWLTGRPDWLGE-ED 108 (300)
T ss_pred hcCCCcEEEEeccccCCCC--------CcCcHHHHHHHhcCCeeEEEEEe--chhhhhhhhHhhhhhhcCCcccccC-CC
Confidence 3457899999988754311 12345667777888877776665 3333333322 11223333321 11
Q ss_pred CCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCC
Q 020492 108 GTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPA 157 (325)
Q Consensus 108 g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~ 157 (325)
.-|+|+-. +-|=.|+=++-+.+.++++.+.|+||+-+|.-++.
T Consensus 109 ------P~W~Gny~-VkYW~~eWkdii~~~l~rL~d~GfdGvyLD~VD~y 151 (300)
T COG2342 109 ------PEWPGNYA-VKYWEPEWKDIIRSYLDRLIDQGFDGVYLDVVDAY 151 (300)
T ss_pred ------CCCCCCce-eeccCHHHHHHHHHHHHHHHHccCceEEEeeechH
Confidence 23777743 45667887777888899999999999999987654
|
|
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.8 Score=48.42 Aligned_cols=88 Identities=13% Similarity=0.063 Sum_probs=55.5
Q ss_pred hHHHHHHHHHCCCEEEeeeCC-ccccCCC---ccccccccccceeee-cCCCCceeeeecCCCccCCCCCChHHHHHHHH
Q 020492 62 PKSLAADLHLNGFKAIWMLDP-GIKHEDG---YFVYDSGSKIDVWIQ-KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 62 ~~~~~~~L~~~G~k~~~~~~P-~i~~~~~---~~~~~~~~~~~~~~~-~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~ 136 (325)
+++||+.||++|++|++-+-. +...... ...++ ....+||.+ +++|..-...+ +.-..-.++.++++..+
T Consensus 468 fk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld-~~vP~YY~r~~~~G~~~ns~c----~n~~Ase~~mvrklIlD 542 (970)
T PLN02877 468 FRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLD-KIVPGYYLRRNSDGFIENSTC----VNNTASEHYMVDRLIVD 542 (970)
T ss_pred HHHHHHHHHHCCCEEEEEECCccccCCCCcchhhccc-CCCCCceEEECCCCCcccCCc----cCCCccCCHHHHHHHHH
Confidence 799999999999999987653 3321110 01222 234466655 44553211111 11124467889999888
Q ss_pred HHHhhh-hCCccEEEecCC
Q 020492 137 LVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 137 ~~~~~~-~~Gvdg~~~D~~ 154 (325)
-++..+ +.|||||-+|..
T Consensus 543 sl~yW~~ey~VDGFRFDlm 561 (970)
T PLN02877 543 DLLNWAVNYKVDGFRFDLM 561 (970)
T ss_pred HHHHHHHHhCCCEEEEEcc
Confidence 888777 589999999976
|
|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.76 Score=46.52 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=60.8
Q ss_pred ChHHHHHHHHHCCCEEEeee-CCccccC--CCccccccccc-cceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWML-DPGIKHE--DGYFVYDSGSK-IDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~-~P~i~~~--~~~~~~~~~~~-~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~ 136 (325)
++|.||+++|..|+-|++-| .-+...+ .+...|+ +.+ ..||-..+.| .-+.+.+...+..+|++.+...+
T Consensus 312 efK~lVd~aHs~GI~VlLDVV~sHaa~n~~d~l~~fd-Gid~~~Yf~~~~r~-----~h~~~~~r~fn~~~~~V~rflL~ 385 (757)
T KOG0470|consen 312 EFKELVDKAHSLGIEVLLDVVHSHAAKNSKDGLNMFD-GIDNSVYFHSGPRG-----YHNSWCSRLFNYNHPVVLRFLLS 385 (757)
T ss_pred HHHHHHHHHhhCCcEEehhhhhhhcccCcCCcchhcc-CcCCceEEEeCCcc-----cccccccccccCCCHHHHHHHHH
Confidence 58999999999999988754 3333332 2333444 444 4455554422 22333455689999999999888
Q ss_pred HHHhhh-hCCccEEEecCCC
Q 020492 137 LVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 137 ~~~~~~-~~Gvdg~~~D~~e 155 (325)
-++..+ +..||||-+|..-
T Consensus 386 nLr~WVtEY~vDGFRFD~~s 405 (757)
T KOG0470|consen 386 NLRWWVTEYHVDGFRFDLVS 405 (757)
T ss_pred HHHHHHHheeccceEEcchh
Confidence 888776 4899999999764
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=90.09 E-value=1.3 Score=42.09 Aligned_cols=123 Identities=17% Similarity=0.169 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhcCCCceEEEE-eccc---CCCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCccccc
Q 020492 19 DKRVREICRTFREKGIPCDVIWM-DIDY---MDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYD 94 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~i-D~~w---~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~~ 94 (325)
.+++++.++.|++.|+.+ |-| ...| ....+.|+ |.-+..+++.+++.|+|+++.+...-.+ .-+.+
T Consensus 9 ~e~~~~d~~~m~~~G~n~--vri~~~~W~~lEP~eG~yd-----F~~lD~~l~~a~~~Gi~viL~~~~~~~P---~Wl~~ 78 (374)
T PF02449_consen 9 EEEWEEDLRLMKEAGFNT--VRIGEFSWSWLEPEEGQYD-----FSWLDRVLDLAAKHGIKVILGTPTAAPP---AWLYD 78 (374)
T ss_dssp CCHHHHHHHHHHHHT-SE--EEE-CCEHHHH-SBTTB--------HHHHHHHHHHHCTT-EEEEEECTTTS----HHHHC
T ss_pred HHHHHHHHHHHHHcCCCE--EEEEEechhhccCCCCeee-----cHHHHHHHHHHHhccCeEEEEecccccc---cchhh
Confidence 478899999999999854 443 3344 22233333 3348899999999999999866421111 11111
Q ss_pred cccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh----C-CccEEEecCCCCCc
Q 020492 95 SGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY----N-GVDGIWNDMNEPAV 158 (325)
Q Consensus 95 ~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~----~-Gvdg~~~D~~e~~~ 158 (325)
...+....+.+|.... .|.....++.+|..++.....++++.+ . .|-+|-+| ||+..
T Consensus 79 --~~Pe~~~~~~~g~~~~----~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~-NE~~~ 140 (374)
T PF02449_consen 79 --KYPEILPVDADGRRRG----FGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQID-NEPGY 140 (374)
T ss_dssp --CSGCCC-B-TTTSBEE----CCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEC-CSTTC
T ss_pred --hcccccccCCCCCcCc----cCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEec-cccCc
Confidence 2334445555664321 233344678889988887777766552 2 36788887 67654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=87.56 E-value=2.4 Score=35.43 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCCCc----------eee-eecCCCCC---ChHHHHHHHHHCCCEEEeeeCC
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMDGF----------RCF-TFDKERFP---DPKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~----------~~f-~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P 82 (325)
.+-+.+.+.++.+++.|+ ++|++-+-+.... .+| ..++ +|- ++++|++.+|++|+++++-+.|
T Consensus 16 G~~~gi~~~l~yl~~lG~--~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~-~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 16 GDLQGIIEKLDYLKDLGV--TAIWLSPIFESPQGYPSYHGYDISDYKQIDP-RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred cCHHHHHHHHHHHHHCCC--CEEEECcceeCCCCCCCCCCcCccccCCCCc-ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 356777777887888775 8888865432221 121 2222 443 3689999999999999987665
|
|
| >TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type | Back alignment and domain information |
|---|
Probab=87.35 E-value=4.2 Score=41.15 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=27.5
Q ss_pred CCCCChH--HHHHHH-HHHHhhhhCCccEEEecCC
Q 020492 123 PDYTQSK--VRSWWG-SLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 123 ~Df~~p~--a~~w~~-~~~~~~~~~Gvdg~~~D~~ 154 (325)
++|.||. +++-.. +.++.+.+.|++|+-+|.+
T Consensus 262 LNw~dPs~av~~~~~gdal~~w~~lG~~GfRLDAv 296 (688)
T TIGR02455 262 LNWLDPTFAAQQLIIGDALHAIDCLGARGLRLDAN 296 (688)
T ss_pred cCccCccHHHHHHHHHHHHHHHHHhccccceeccc
Confidence 6789999 887766 6788888999999999975
|
Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits. |
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
Probab=87.31 E-value=7.7 Score=39.76 Aligned_cols=121 Identities=13% Similarity=0.076 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCC---------hHHHHHH-HHHCCCEEEeeeCCc-cccC
Q 020492 19 DKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPD---------PKSLAAD-LHLNGFKAIWMLDPG-IKHE 87 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd---------~~~~~~~-L~~~G~k~~~~~~P~-i~~~ 87 (325)
.+++.++++++++.|+. +|.+-.. .+..++=.++...||+ +..+.=. -|+.|+|+--|+.|. +...
T Consensus 333 ~~~L~~lLdrlk~~G~n--tV~lqaf-adp~gd~~~~s~yfP~~~lp~r~d~f~~~aw~l~~r~~v~v~AWmp~~~~~~~ 409 (671)
T PRK14582 333 DRNIDVLIQRVKDMQIS--TVYLQAF-ADPDGDGLVKELYFPNRLLPMRADLFNRVAWQLRTRAGVNVYAWMPVLSFDLD 409 (671)
T ss_pred HHHHHHHHHHHHHcCCC--EEEEEec-cCCCCCccccccccCccccccccCCcCHHHHHHHHhhCCEEEEeccceeeccC
Confidence 46777888888888874 3433311 1122333455566664 1121112 456699999999886 3332
Q ss_pred CCccccccccccceeeecCCCCce-eeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecC
Q 020492 88 DGYFVYDSGSKIDVWIQKADGTPF-IGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDM 153 (325)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~g~~~-~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~ 153 (325)
.+...- .+. +.++.+. +...|.+. +|.+.|++++|..+..+.+.. ..|||+-+|-
T Consensus 410 ~~~~~~---~~~-----~~~~~~~~~~~~~~~r---l~P~~pe~r~~i~~i~~dla~~~~~dGilf~D 466 (671)
T PRK14582 410 PTLPRV---KRL-----DTGEGKAQIHPEQYRR---LSPFDDRVRAQVGMLYEDLAGHAAFDGILFHD 466 (671)
T ss_pred CCcchh---hhc-----cccCCccccCCCCCcC---CCCCCHHHHHHHHHHHHHHHHhCCCceEEecc
Confidence 221111 110 1112111 11122122 899999999999999999887 5899998874
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=83.95 E-value=4.3 Score=37.68 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=45.6
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC-CceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 9 YHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD-GFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 9 ~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
+|.+|. ..+..++.++++++.|+..=.+.+-+.+.. ..+.|+|.. .-|+..+++..++.|++|++..-|+|..+
T Consensus 16 ~hy~r~---p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g--~~dl~~f~~~a~~~gl~vilrpGpyi~aE 90 (319)
T PF01301_consen 16 FHYFRI---PPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTG--NRDLDRFLDLAQENGLYVILRPGPYICAE 90 (319)
T ss_dssp E-GGGS----GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SG--GG-HHHHHHHHHHTT-EEEEEEES---TT
T ss_pred eccccC---ChhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccc--hhhHHHHHHHHHHcCcEEEecccceeccc
Confidence 344443 267789999999999987655554444332 234455532 35889999999999999999999999876
Q ss_pred C
Q 020492 88 D 88 (325)
Q Consensus 88 ~ 88 (325)
-
T Consensus 91 ~ 91 (319)
T PF01301_consen 91 W 91 (319)
T ss_dssp B
T ss_pred c
Confidence 4
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=82.08 E-value=16 Score=34.28 Aligned_cols=119 Identities=14% Similarity=0.180 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEe--cc---cCCCceeeeecCCCCC-C-hHHHHHHHHHCCCEEEeeeCCccccCCCcc
Q 020492 19 DKRVREICRTFREKGIPCDVIWMD--ID---YMDGFRCFTFDKERFP-D-PKSLAADLHLNGFKAIWMLDPGIKHEDGYF 91 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD--~~---w~~~~~~f~~d~~~FP-d-~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~ 91 (325)
.-+..+.++.+++.|...-++..- ++ |-+...+|+.-...+. | .+++++.+++.|+|++++.+|. .-...
T Consensus 90 ~fD~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~-dw~~~-- 166 (346)
T PF01120_consen 90 KFDADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPW-DWHHP-- 166 (346)
T ss_dssp T--HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESS-SCCCT--
T ss_pred cCCHHHHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecch-HhcCc--
Confidence 455678899999999865444332 11 1122233332111111 4 4899999999999999998875 21111
Q ss_pred ccccccccceeeecCCCCceeeeecCCCccCCCCCChH-HHHHHHHHHHhhhh-CCccEEEecCCCC
Q 020492 92 VYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSK-VRSWWGSLVKDFIY-NGVDGIWNDMNEP 156 (325)
Q Consensus 92 ~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~-a~~w~~~~~~~~~~-~Gvdg~~~D~~e~ 156 (325)
.+........ .+ + .. ..-..++ ..+++..+++.|++ ..+|.+|+|.+-+
T Consensus 167 ~~~~~~~~~~-----~~-~--------~~--~~~~~~~~~~~~~~~ql~EL~~~Y~~d~lWfDg~~~ 217 (346)
T PF01120_consen 167 DYPPDEEGDE-----NG-P--------AD--GPGNWQRYYNEYWLAQLRELLTRYKPDILWFDGGWP 217 (346)
T ss_dssp TTTSSCHCHH-----CC-----------H--CCHHHHHHHHHHHHHHHHHHHHCSTESEEEEESTTS
T ss_pred ccCCCccCCc-----cc-c--------cc--cchhhHhHhhhhhHHHHHHHHhCCCcceEEecCCCC
Confidence 1110000000 00 0 00 0000012 23477788888775 7899999998754
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 325 | ||||
| 3l4t_A | 875 | Crystal Complex Of N-Terminal Human Maltase-Glucoam | 3e-55 | ||
| 2qly_A | 870 | Crystral Structure Of The N-Terminal Subunit Of Hum | 3e-55 | ||
| 2g3m_A | 693 | Crystal Structure Of The Sulfolobus Solfataricus Al | 9e-55 | ||
| 3m46_A | 666 | The Crystal Structure Of The D73a Mutant Of Glycosi | 4e-54 | ||
| 3lpo_A | 898 | Crystal Structure Of The N-Terminal Domain Of Sucra | 6e-54 | ||
| 3pha_A | 667 | The Crystal Structure Of The W169y Mutant Of Alpha- | 2e-53 | ||
| 3nuk_A | 666 | The Crystal Structure Of The W169y Mutant Of Alpha- | 2e-53 | ||
| 3nsx_A | 666 | The Crystal Structure Of The The Crystal Structure | 3e-53 | ||
| 3m6d_A | 666 | The Crystal Structure Of The D307a Mutant Of Glycos | 3e-53 | ||
| 3n04_A | 666 | The Crystal Structure Of The Alpha-Glucosidase (Fam | 3e-44 | ||
| 3ton_A | 908 | Crystral Structure Of The C-Terminal Subunit Of Hum | 8e-34 | ||
| 4b9y_A | 817 | Crystal Structure Of Apo Agd31b, Alpha-transglucosy | 2e-30 | ||
| 2xvg_A | 1020 | Crystal Structure Of Alpha-Xylosidase (Gh31) From C | 2e-19 | ||
| 2x2h_A | 1027 | Crystal Structure Of The Gracilariopsis Lemaneiform | 1e-18 | ||
| 1xsi_A | 778 | Structure Of A Family 31 Alpha Glycosidase Length = | 4e-18 | ||
| 2f2h_A | 773 | Structure Of The Yici Thiosugar Michaelis Complex L | 4e-18 | ||
| 1we5_A | 772 | Crystal Structure Of Alpha-Xylosidase From Escheric | 7e-17 |
| >pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase With Bj2661 Length = 875 | Back alignment and structure |
|
| >pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase Length = 870 | Back alignment and structure |
|
| >pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha- Glucosidase Mala Length = 693 | Back alignment and structure |
|
| >pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 | Back alignment and structure |
|
| >pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of Sucrase-Isomal Length = 898 | Back alignment and structure |
|
| >pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum Atcc 29174 In Complex With Acarbose Length = 667 | Back alignment and structure |
|
| >pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 | Back alignment and structure |
|
| >pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The D420a Mutant Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 | Back alignment and structure |
|
| >pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 | Back alignment and structure |
|
| >pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 | Back alignment and structure |
|
| >pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human Maltase- Glucoamylase Length = 908 | Back alignment and structure |
|
| >pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 Length = 817 | Back alignment and structure |
|
| >pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From Cellvibrio Japonicus Length = 1020 | Back alignment and structure |
|
| >pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis Alpha- 1,4-Glucan Lyase Length = 1027 | Back alignment and structure |
|
| >pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase Length = 778 | Back alignment and structure |
|
| >pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex Length = 773 | Back alignment and structure |
|
| >pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli Length = 772 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 325 | |||
| 2g3m_A | 693 | Maltase, alpha-glucosidase; hydrolase, glycoside h | 1e-160 | |
| 3nsx_A | 666 | Alpha-glucosidase; structural genomics, PSI-2, pro | 1e-157 | |
| 3l4y_A | 875 | Maltase-glucoamylase, intestinal; glycoside hydrol | 1e-153 | |
| 3lpp_A | 898 | Sucrase-isomaltase; glycoside hydrolase family 31, | 1e-149 | |
| 2f2h_A | 773 | Putative family 31 glucosidase YICI; BETA8alpha8 b | 1e-137 | |
| 2x2h_A | 1027 | Alpha-1,4-glucan lyase isozyme 1; anhydrofructose | 1e-130 | |
| 3top_A | 908 | Maltase-glucoamylase, intestinal; membrane, hydrol | 1e-130 | |
| 2xvl_A | 1020 | Alpha-xylosidase, putative, XYL31A; hydrolase, gly | 1e-125 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 1e-08 |
| >2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Length = 693 | Back alignment and structure |
|---|
Score = 464 bits (1195), Expect = e-160
Identities = 111/334 (33%), Positives = 172/334 (51%), Gaps = 31/334 (9%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PP W+ GY R+SY +V E+ +++G +++DI YMD ++ FT+ RFP
Sbjct: 171 LPPMWAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFP 230
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
+PK L +LH K I ++D GI+ + Y + SG + + + G F+G++WPG
Sbjct: 231 EPKKLIDELHKRNVKLITIVDHGIRVDQNYSPFLSG--MGKFCEIESGELFVGKMWPGTT 288
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVF-------------------KS 161
V+PD+ + R WW L+ +++ GVDGIW DMNEP F
Sbjct: 289 VYPDFFREDTREWWAGLISEWLSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLPVQFRDDR 348
Query: 162 VTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFI 221
+ T P++ +H G H N Y + A +T++G + + + F+L+RAG+
Sbjct: 349 LVTTFPDNVVHYLR---GKRVKHEKVRNAYPLYEAMATFKGFRTSHR-NEIFILSRAGYA 404
Query: 222 GSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDG------NATPRLF 275
G QRYA WTGDN +W+ L + + +VL L +SG PF G DIGGF G + + L
Sbjct: 405 GIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLL 464
Query: 276 GRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVL 309
++ + FPF R H +D ID EP +
Sbjct: 465 VKYYALALFFPFYRSHKATDGIDTEPVFLPDYYK 498
|
| >3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Length = 666 | Back alignment and structure |
|---|
Score = 454 bits (1170), Expect = e-157
Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 32/339 (9%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+PPK++ G+ Q RW Y + + R + + +RE IP D+I+MDIDYM F+ FT +++ FP
Sbjct: 159 IPPKFAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFP 218
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPC 120
D ++ + I ++D G+K E GY VY+ G K + + ++ DG+ F+ VWPG
Sbjct: 219 DFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDT 278
Query: 121 VFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVF--------------------- 159
FPD + R W+G + I G++G WNDMNEPA+F
Sbjct: 279 HFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFAKDTE 338
Query: 160 -----------KSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADK 208
PE + G H HN++G M R+ E + D
Sbjct: 339 GKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAFERIDP 398
Query: 209 DKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDG 268
+KR + +R+ +IG RY W G N S W H+ +++ M+ L + G ++G D+GGF
Sbjct: 399 EKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGD 458
Query: 269 NATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 307
+ T L R++ +G P R H + E + F
Sbjct: 459 DTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFENI 497
|
| >3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Length = 875 | Back alignment and structure |
|---|
Score = 449 bits (1156), Expect = e-153
Identities = 125/338 (36%), Positives = 164/338 (48%), Gaps = 24/338 (7%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
+P W+LG+H R+ Y + +RE+ R +P DV DIDYMD R FT+D F
Sbjct: 286 LPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFK 345
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIK----HEDGYFVYDSGSKIDVWIQKADG-TPFIGEV 115
+LH NG K + ++DP I Y YD GS + +W+ +DG TP IGEV
Sbjct: 346 GFPEFVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEV 405
Query: 116 WPGPCVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAVFKSVTKTMPESNIHRG 174
WPG VFPDYT WW + F DGIW DMNE + F + + +N
Sbjct: 406 WPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNN 465
Query: 175 ------------------DDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLT 216
D + HN+YG MA +T E K +KR F+LT
Sbjct: 466 PPFTPRILDGYLFCKTLCMDAVQHWGKQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILT 525
Query: 217 RAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFG 276
R+ F GS ++AA W GDN + W+ L SI VL+ L G P GPDI GF + L
Sbjct: 526 RSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCR 585
Query: 277 RWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSI 314
RWM +GA +PF R H D +P SFG + L +S
Sbjct: 586 RWMQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSS 623
|
| >3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Length = 898 | Back alignment and structure |
|---|
Score = 440 bits (1132), Expect = e-149
Identities = 120/339 (35%), Positives = 165/339 (48%), Gaps = 25/339 (7%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
MP W+LG+ RW+Y S V+E+ R RE GIP D DIDYM+ + FT+D+ F
Sbjct: 314 MPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFN 373
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHE-----DGYFVYDSGSKIDVWIQKADG-TPFIGE 114
DLH +G K + +LDP I Y Y+ G+ VWI ++DG TP IGE
Sbjct: 374 GLPQFVQDLHDHGQKYVIILDPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGE 433
Query: 115 VWPGPCVFPDYTQSKVRSWWGSLVKDFIYN-GVDGIWNDMNEPAVFKSVT-KTMPESNIH 172
VWPG V+PD+T WW + F DG+W DMNE + F + K + ++
Sbjct: 434 VWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDMNEVSSFIQGSTKGCNVNKLN 493
Query: 173 RGDDEIGGCQN-----------------HSYYHNVYGMLMARSTYEGMKLADKDKRPFVL 215
H++YG MA +T + ++ +KR F+L
Sbjct: 494 YPPFTPDILDKLMYSKTICMDAVQNWGKQYDVHSLYGYSMAIATEQAVQKVFPNKRSFIL 553
Query: 216 TRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLF 275
TR+ F GS R+AA W GDN ++WE + SI+ +L+ L G P G DI GF T L
Sbjct: 554 TRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEELC 613
Query: 276 GRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSI 314
RWM +GA +PF R H +P FG+ L S
Sbjct: 614 RRWMQLGAFYPFSRNHNSDGYEHQDPAFFGQNSLLVKSS 652
|
| >2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Length = 773 | Back alignment and structure |
|---|
Score = 406 bits (1044), Expect = e-137
Identities = 70/313 (22%), Positives = 120/313 (38%), Gaps = 23/313 (7%)
Query: 1 MPPKWSLGYHQCRWSYDS--DKRVREICRTFREKGIPCDVIWMDIDYMDGFRC--FTFDK 56
+PP WS G + + V E+ +P V D +M F+ F +D
Sbjct: 263 LPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDP 322
Query: 57 ERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVW 116
FPDP+ + L G K ++P I + V+ + +++ DG+ + + W
Sbjct: 323 LTFPDPEGMIRRLKAKGLKICVWINPYIGQK--SPVFKELQEKGYLLKRPDGSLWQWDKW 380
Query: 117 PGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDD 176
D+T W+ +K + GVD D E +P
Sbjct: 381 QPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGER---------IPTDVQWFDGS 431
Query: 177 EIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
+ HN Y + + +K ++ + R+ +G+Q++ W GD +
Sbjct: 432 D------PQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 485
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
N+E + S+ L +GLSG F DIGGF+ A ++ RW G + R H
Sbjct: 486 NYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH--GSK 543
Query: 297 IDHEPWSFGEEVL 309
PW++ +E
Sbjct: 544 SYRVPWAYDDESC 556
|
| >2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Length = 1027 | Back alignment and structure |
|---|
Score = 395 bits (1016), Expect = e-130
Identities = 79/396 (19%), Positives = 141/396 (35%), Gaps = 88/396 (22%)
Query: 1 MPPKWSLGYHQCRWSYDSDKR-----------VREICRTFREKGIPCDVIWMDIDYMDGF 49
MPPK+ G+ Q + S R V EI ++ P + + +D+D D
Sbjct: 349 MPPKYVFGFFQGVFGTSSLLRAHMPAGENNISVEEIVEGYQNNNFPFEGLAVDVDMQDNL 408
Query: 50 RCFTFDKERF----------PDPKSLAADLHLNGFKAIWMLDPGIKHED---GYFVYDSG 96
R FT E + P+ +S+ H G + +++++ Y V +
Sbjct: 409 RVFTTKGEFWTANRVGTGGDPNNRSVFEWAHDKGLVCQTNITCFLRNDNEGQDYEVNQTL 468
Query: 97 SKIDVWIQKAD-------------GTPFIGEVWPG-----PCVFPDYTQSKVRSWWGSLV 138
+ ++ + +IG + G +FPD+ + V WWG+
Sbjct: 469 RERQLYTKNDSLTGTDFGMTDDGPSDAYIGHLDYGGGVECDALFPDWGRPDVAEWWGNNY 528
Query: 139 KDFIYNGVDGIWNDMNEPAVFKSVT--------------KTMPESNIHRGDDEI------ 178
K G+D +W DM PA+ P + +
Sbjct: 529 KKLFSIGLDFVWQDMTVPAMMPHKIGDDINVKPDGNWPNADDPSNGQYNWKTYHPQVLVT 588
Query: 179 ------GGCQNHSYYHNVYGMLMARSTY-----EGMKLADKDKRPFVLTRAGFIGSQRYA 227
G + N++ + ST E K +R ++++R G+IG+Q +
Sbjct: 589 DMRYENHGREPMVTQRNIHAYTLCESTRKEGIVENADTLTKFRRSYIISRGGYIGNQHFG 648
Query: 228 ATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN--------ATPRLFGRWM 279
W GDN + ++ M I+ + + +S P G DIGGF T L R++
Sbjct: 649 GMWVGDNSTTSNYIQMMIANNINMNMSCLPLVGSDIGGFTSYDNENQRTPCTGDLMVRYV 708
Query: 280 GIGAMFPFCRGHTES-------DAIDHEPWSFGEEV 308
G + P+ R H + E + + E+
Sbjct: 709 QAGCLLPWFRNHYDRWIESKDHGKDYQELYMYPNEM 744
|
| >3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Length = 908 | Back alignment and structure |
|---|
Score = 392 bits (1008), Expect = e-130
Identities = 103/369 (27%), Positives = 154/369 (41%), Gaps = 64/369 (17%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFP 60
M P WSLG+ CR+ Y +D + + IP DV + DIDYM+ FT +F
Sbjct: 287 MVPYWSLGFQLCRYGYQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSP-KFA 345
Query: 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDG--YFVYDSGSKIDVWIQKA-DGTPFIGEVWP 117
+L + +G + I +LDP I + Y + G + DV+I+ DG G+VWP
Sbjct: 346 GFPALINRMKADGMRVILILDPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVWP 405
Query: 118 ---------------------GPCVFPDYTQSKVRSWWGSLVKDFIYN--------GVDG 148
FPD+ ++ WW +++ N DG
Sbjct: 406 DFPDVVVNGSLDWDSQVELYRAYVAFPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDG 465
Query: 149 IWNDMNEPAVFKSVT----------------------------KTMPESNIHRGDDEIGG 180
+W DMNEP+ F + KT+ + D G
Sbjct: 466 MWIDMNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSSKTLCMESQQILPD--GS 523
Query: 181 CQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEH 240
H HN+YG R TYE ++ +R V+TR+ F S R+A W GDN + W+
Sbjct: 524 LVQHYNVHNLYGWSQTRPTYEAVQEV-TGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQ 582
Query: 241 LHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHE 300
L SI +++ L G ++G DI GF +A + RWM +GA +PF R H +
Sbjct: 583 LKKSIIGMMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQD 642
Query: 301 PWSFGEEVL 309
P S+ +
Sbjct: 643 PVSWDVAFV 651
|
| >2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Length = 1020 | Back alignment and structure |
|---|
Score = 381 bits (980), Expect = e-125
Identities = 85/335 (25%), Positives = 131/335 (39%), Gaps = 37/335 (11%)
Query: 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYM--DGFRCFTFDKER 58
M PKW+ G+ Q R Y S + + + +R++ IP D I +D Y D + FDK+
Sbjct: 429 MLPKWAYGFWQSRERYKSSDEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWGSHDFDKQF 488
Query: 59 FPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPG 118
FPDPK+L +H + + + P Y + + + + G
Sbjct: 489 FPDPKALVDKVHAMNAQIMISVWPKFY--PTTDNYKELNAKGFMFNRNLDEKNLDWIGKG 546
Query: 119 -PCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDD 176
F D + + + ++D I +G D W D EP + ++T + +
Sbjct: 547 YLNAFYDPFSPEATAIFWKQIRDKINVHGFDAWWLDAVEPDIHSNLTFEKRKWLMTP--- 603
Query: 177 EIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRY-AATWTGDNV 235
N + N Y + A Y+G D DKR F+LTR+GF G QR +A W+GD V
Sbjct: 604 --NARGNGAEIFNAYAVPHAEGVYQGELATDGDKRSFILTRSGFGGIQRTGSAIWSGDIV 661
Query: 236 SNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDG-----------------------NATP 272
S W + I+ + L+G DIGGF +
Sbjct: 662 SRWSDMKDQIAAGIGTNLAGVTNWTFDIGGFTPEDRFRHGKKGFVGSWTALDAEQVDEWQ 721
Query: 273 RLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 307
L RW GA P R H E ++ +E
Sbjct: 722 ELNTRWYQFGAFVPLYRSH--GQNPYREIFNIADE 754
|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 1e-08
Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 9/139 (6%)
Query: 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKA- 76
+ + + + + P +V +D Y + + FP + +A + NGF
Sbjct: 210 TWEETLKNLKLAKN--FPFEVFQIDDAYEKDIGDWLVTRGDFPSVEEMAKVIAENGFIPG 267
Query: 77 IWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136
IW P E + D +++ W D ++ +V +W
Sbjct: 268 IW-TAPFSVSETSDVFNEHP---DWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFD 323
Query: 137 LVKDFIYNGVDGI-WNDMN 154
L G D
Sbjct: 324 LFSSLRKMGYRYFKI-DFL 341
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 325 | |||
| 3nsx_A | 666 | Alpha-glucosidase; structural genomics, PSI-2, pro | 100.0 | |
| 3lpp_A | 898 | Sucrase-isomaltase; glycoside hydrolase family 31, | 100.0 | |
| 3l4y_A | 875 | Maltase-glucoamylase, intestinal; glycoside hydrol | 100.0 | |
| 3top_A | 908 | Maltase-glucoamylase, intestinal; membrane, hydrol | 100.0 | |
| 2g3m_A | 693 | Maltase, alpha-glucosidase; hydrolase, glycoside h | 100.0 | |
| 4ba0_A | 817 | Alpha-glucosidase, putative, ADG31B; hydrolase; HE | 100.0 | |
| 2f2h_A | 773 | Putative family 31 glucosidase YICI; BETA8alpha8 b | 100.0 | |
| 2xvl_A | 1020 | Alpha-xylosidase, putative, XYL31A; hydrolase, gly | 100.0 | |
| 2x2h_A | 1027 | Alpha-1,4-glucan lyase isozyme 1; anhydrofructose | 100.0 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 99.93 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 99.91 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 99.89 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 99.89 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 99.8 | |
| 3cc1_A | 433 | BH1870 protein, putative alpha-N-acetylgalactosami | 99.71 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 99.47 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 99.45 | |
| 3hg3_A | 404 | Alpha-galactosidase A; glycoprotein, carbohydrate- | 99.43 | |
| 1szn_A | 417 | Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma | 99.43 | |
| 3lrk_A | 479 | Alpha-galactosidase 1; tetramer, GH27, glycoprotei | 99.38 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 99.23 | |
| 4do4_A | 400 | Alpha-N-acetylgalactosaminidase; pharmacological c | 99.16 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 97.51 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 97.42 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 97.32 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 97.31 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 97.28 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 97.23 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 97.21 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 97.19 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 97.18 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 97.16 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 97.15 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 97.13 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 97.09 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 97.09 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 97.08 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 97.07 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 97.07 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 97.05 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 97.03 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 97.03 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 97.01 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 96.98 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 96.93 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 96.86 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.84 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 96.83 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 96.77 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 96.72 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 96.63 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 96.63 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 96.61 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 96.59 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 96.56 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 96.54 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 96.47 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 96.46 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 96.36 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 96.33 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 96.29 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 96.28 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 96.26 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 96.23 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 96.23 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 96.21 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 96.19 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 96.14 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 96.12 | |
| 2aam_A | 309 | Hypothetical protein TM1410; structural genomics, | 96.12 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 96.11 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 95.91 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 95.91 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 95.89 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 95.84 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 95.7 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 95.66 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 95.55 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 95.52 | |
| 2d73_A | 738 | Alpha-glucosidase SUSB; glycoside hydrolase family | 95.5 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 95.48 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 94.24 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 93.05 | |
| 1r7a_A | 504 | Sucrose phosphorylase; beta-alpha-barrels, dimer, | 92.66 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 92.14 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 91.85 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 90.97 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 90.96 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 89.11 | |
| 3vmn_A | 643 | Dextranase; TIM barrel, immunoglobrin fold, greek- | 88.5 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 87.62 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 86.26 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 85.9 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 82.82 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 82.71 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 81.25 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 81.25 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 81.03 |
| >3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-85 Score=654.70 Aligned_cols=314 Identities=34% Similarity=0.711 Sum_probs=289.5
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||||||+|.++++|+++++++++++||||++|+|++|+.++++|+||+++||||++|+++||++|+|+++++
T Consensus 159 lpP~walG~~qsr~~Y~~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPdp~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 159 IPPKFAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPDFPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp CCCGGGGSEEEEETTCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTTHHHHHHHHHTTTCEEEEEE
T ss_pred CCccccccccccccccCCHHHHHHHHHHHHhcCCCcceEEEecHHHHhhcccccChhhCCCHHHHHHHHHHcCceEEeee
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFK 160 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~ 160 (325)
+|+|..++++.+|+++.++++|+++++|+++++.+|||.++++||+||+|++||.++++.+++.||||||+|+|||+.|+
T Consensus 239 dP~i~~~~~~~~y~e~~~~g~fvk~~~G~~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~~~~Gidg~W~DmnEp~~f~ 318 (666)
T 3nsx_A 239 DAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAIFY 318 (666)
T ss_dssp ESCEECCTTCHHHHHHHHTTCBCBCTTSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHHHTTTCCEEEEESTTTCCSE
T ss_pred ccceeeecCchHHhhhcccCccccCCCCCcceEEecCCccCCccccCHHHHHHhhhhhhHHHhccchhhhhccCCcceEe
Confidence 99998877788999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCC----------------CCCCC-------------------CCccCCCCCCCcccccccccchhHHHHHHHHHHHHHh
Q 020492 161 SVT----------------KTMPE-------------------SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKL 205 (325)
Q Consensus 161 ~~~----------------~~~P~-------------------~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~ 205 (325)
..+ ..++. ...|..+ ++...|.++||+|+++++++++|++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~h~~~---g~~~~~~~~hNlYg~~~~~at~e~l~~ 395 (666)
T 3nsx_A 319 SSEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVN---GKKIRHDKVHNLFGYNMTRAAGEAFER 395 (666)
T ss_dssp EHHHHHHHHHHHHHHHHCCSSCSCHHHHHHHHHHTTTCHHHHTSCEEEET---TEEEEGGGGGGGHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhccccchhhhhhHHHHHhhhcCChHHHHHHhhhcC---CeEEehhhhhhhhccchhHHHHHHHHh
Confidence 311 00100 0011100 122367899999999999999999999
Q ss_pred hcCCCCcEEEEccccCCCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhccc
Q 020492 206 ADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMF 285 (325)
Q Consensus 206 ~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~ 285 (325)
..+++|||++|||+|+|+|||+++|+||+.|+|+.|+.+|+++|++||+|+|+||+|||||.+++++|||+||+|+|||+
T Consensus 396 ~~~~~RpfilsRS~~aGsqry~~~W~GDn~s~W~~L~~sI~~~L~~~l~G~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~ 475 (666)
T 3nsx_A 396 IDPEKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFT 475 (666)
T ss_dssp HCTTCCCEEEESSEETTGGGTCEEEECCSSCCTHHHHHHHHHHHHHHHTTCCSEEECCCCCBTCSCHHHHHHHHHHHTTS
T ss_pred hCCCceEEEEeccceeceeecCceecCCCccHHHHHHHhhhhccccccceeeeeccccCcCCCCchHHHHHHHHHHhcCc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCccccChhhHHHHHHHHHHh
Q 020492 286 PFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF 319 (325)
Q Consensus 286 P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~~ 319 (325)
|+||+|+..++.++|||.|+ +.+++|++|+|.
T Consensus 476 P~~R~H~~~~~~~~ePw~~~--~~~~~r~~i~lR 507 (666)
T 3nsx_A 476 PLMRDHAAEGTREQECYQFE--NIEDFRSVINAR 507 (666)
T ss_dssp SSEEEEECSSBCCCCGGGST--TTHHHHHHHHHH
T ss_pred hhhhcccccCcccccccccC--CHHHHHHHhhhh
Confidence 99999998877899999998 999999999874
|
| >3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-83 Score=655.49 Aligned_cols=319 Identities=37% Similarity=0.686 Sum_probs=289.9
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||||||+|.++++|+++++++++++||+|++|+|++|+.++++|+||+++||||++|+++||++|+|+++|+
T Consensus 314 lpP~WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp~~mv~~Lh~~G~k~vl~i 393 (898)
T 3lpp_A 314 MPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFNGLPQFVQDLHDHGQKYVIIL 393 (898)
T ss_dssp CCCGGGGSCEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred cCcchhcCcceecccCCCHHHHHHHHHHHHHcCCCceeeEeccccccCCCcceEChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCC-----CccccccccccceeeecCCC-CceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecC
Q 020492 81 DPGIKHED-----GYFVYDSGSKIDVWIQKADG-TPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDM 153 (325)
Q Consensus 81 ~P~i~~~~-----~~~~~~~~~~~~~~~~~~~g-~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~ 153 (325)
+|+|..++ .|.+|+++.++++|+++++| +++++.+|||.++++||+||+|++||.++++++++ .||||+|+||
T Consensus 394 dP~I~~~~~~~~~~Y~~y~eg~~~g~fvk~~~G~~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~giDg~W~Dm 473 (898)
T 3lpp_A 394 DPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDM 473 (898)
T ss_dssp CSCEECSCCTTSCCCHHHHHHHHHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHHHSCCSEEEECS
T ss_pred CCccccCCcccccccHHHHHHHhCCcEEECCCCCceeEEEecCCCccccCCCCHHHHHHHHHHHHHHHhcCCccEEEEeC
Confidence 99998765 58899999999999999999 89999999999999999999999999999998874 8999999999
Q ss_pred CCCCccCCCCC--------CCCCCCc-------cCCCCCCCcc---cccccccchhHHHHHHHHHHHHHhhcCCCCcEEE
Q 020492 154 NEPAVFKSVTK--------TMPESNI-------HRGDDEIGGC---QNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVL 215 (325)
Q Consensus 154 ~e~~~~~~~~~--------~~P~~~~-------~~~~~~~~~~---~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~ 215 (325)
|||+.|+.... ..|+... ...+.+++.. ..|.++||+|++++++|++|++++..+++|||++
T Consensus 474 nEp~~F~~g~~~~~~~~~l~~p~y~p~~~~~~l~~~t~~~d~~~~~g~~~~~HNlYg~~~~~at~e~l~~~~~~~Rpfil 553 (898)
T 3lpp_A 474 NEVSSFIQGSTKGCNVNKLNYPPFTPDILDKLMYSKTICMDAVQNWGKQYDVHSLYGYSMAIATEQAVQKVFPNKRSFIL 553 (898)
T ss_dssp TTTCCSSSBCTTCCCCSTTTSCSSCCSCGGGCTTTTSBCTTCEETTEEHHHHGGGHHHHHHHHHHHHHHHHSTTBCCCEE
T ss_pred CCcccccCCccccCccccccCCCccccccccccccccccccccccCCcchhcccchhHHHHHHHHHHHHHhccCCCccEE
Confidence 99999864311 1121110 0000011111 1567899999999999999999998889999999
Q ss_pred EccccCCCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCC
Q 020492 216 TRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESD 295 (325)
Q Consensus 216 srs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~ 295 (325)
|||+|+|+|||+++|+||+.++|++|+.+|+++|++||+|+||||+|||||.+++++|||+||+|+|||+|+||+|+..+
T Consensus 554 sRS~~aGsqRy~~~WsGDn~s~W~~L~~sI~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~ 633 (898)
T 3lpp_A 554 TRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEELCRRWMQLGAFYPFSRNHNSDG 633 (898)
T ss_dssp ESCCCTTGGGTCEEECCSCBSSHHHHHHHHHHHHHHHHTTCCSEECEETCSBSCCCHHHHHHHHHHHTTSSSCEECCCTT
T ss_pred EecccCCCCccccccCCcccCCHHHHHHHHHHHHHHhhcCCCcccCCCcCCCCCCCHHHHHHHHHHhcCCccchhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCccccChh--hHHHHHHHHHHh
Q 020492 296 AIDHEPWSFGEE--VLFCSSIVIIAF 319 (325)
Q Consensus 296 ~~~~~Pw~~~~~--~~~~~r~~~~~~ 319 (325)
+.++|||.|+++ +.+++|++|+|-
T Consensus 634 ~~~~EPw~f~~~~~~~~~~r~~i~lR 659 (898)
T 3lpp_A 634 YEHQDPAFFGQNSLLVKSSRQYLTIR 659 (898)
T ss_dssp SCCCSGGGGCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCeecCCcHHHHHHHHHHHHHH
Confidence 789999999988 999999999874
|
| >3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-83 Score=653.39 Aligned_cols=319 Identities=39% Similarity=0.709 Sum_probs=289.0
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||||||+|.++++|+++++++++++||+|++|+|++|+.++++|+||+++||||++|+++||++|+|+++|+
T Consensus 286 lpP~WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 286 LPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKGFPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp CCCGGGGSEEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCccccccceeccCCCCHHHHHHHHHHHHhcCCCCceEEEccchhcCCCceeeChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCC----CccccccccccceeeecCCCC-ceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 81 DPGIKHED----GYFVYDSGSKIDVWIQKADGT-PFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 81 ~P~i~~~~----~~~~~~~~~~~~~~~~~~~g~-~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+|+|..++ .|.+|+++.++++|+++++|. ++++.+|||.++++||+||+|++||.++++++++ .|+||+|+|+|
T Consensus 366 dP~I~~~s~~~~~y~~y~eg~~~g~fvk~~dG~~~~~g~~WpG~~~~pDFtnP~a~~WW~~~~k~~~~~~gidg~W~Dmn 445 (875)
T 3l4y_A 366 DPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMN 445 (875)
T ss_dssp CSCEECCCCSSSCCHHHHHHHHHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHTTSCCSEEEECST
T ss_pred CCccccCcccccccHHHHHHHHCCeEEECCCCCcceEEEecCCCccCcCCCCHHHHHHHHHHHHHHHhhcCCcEEEEcCC
Confidence 99998766 688999999999999999985 5999999999999999999999999999998874 89999999999
Q ss_pred CCCccCCCCC--------CCCCCC-------ccCCCCCCCcc---cccccccchhHHHHHHHHHHHHHhhcCCCCcEEEE
Q 020492 155 EPAVFKSVTK--------TMPESN-------IHRGDDEIGGC---QNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLT 216 (325)
Q Consensus 155 e~~~~~~~~~--------~~P~~~-------~~~~~~~~~~~---~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~s 216 (325)
||+.|+.... ..|+.. ......+++.. ..|.++||+|++++++|++|++++..+++|||++|
T Consensus 446 Ep~~f~~g~~~~c~~~~l~~ppy~p~~~d~~l~~~t~~~d~~~~~g~h~~~HNlYg~~~~~at~e~l~~~~~~kRpfils 525 (875)
T 3l4y_A 446 EVSNFVDGSVSGCSTNNLNNPPFTPRILDGYLFCKTLCMDAVQHWGKQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILT 525 (875)
T ss_dssp TTCCSSSBSTTCCCCSTTTSCSCCCSCGGGCTTTTSBCTTCEETTEEHHHHGGGHHHHHHHHHHHHHHHHSTTBCCCEEE
T ss_pred CccccCCCccccCccccccCCCccccccccccccCccccchhhcCCcchhhhhHhHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 9999864211 112110 01111111111 14678999999999999999999988899999999
Q ss_pred ccccCCCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCC
Q 020492 217 RAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296 (325)
Q Consensus 217 rs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~ 296 (325)
||+|+|+|||+++|+||+.++|++|+.+|+++|++||+|+||||+|||||.+++++|||+||+|+|||+|+||+|+..++
T Consensus 526 RS~~aGsqry~~~WsGDn~s~W~~L~~sI~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~ 605 (875)
T 3l4y_A 526 RSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGY 605 (875)
T ss_dssp SSCCTTGGGTCEEECCSCBSSHHHHHHHHHHHHHHHHTTCCSEECEETCSBSCCCHHHHHHHHHHHTTSSSEEECCCTTS
T ss_pred ccccCCCCccccccCCchhcCHHHHHHHHHHHHHHHhcCCCeecCCcCCcCCCCCHHHHHHHHHHhhcCceeeccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCccccChh--hHHHHHHHHHHh
Q 020492 297 IDHEPWSFGEE--VLFCSSIVIIAF 319 (325)
Q Consensus 297 ~~~~Pw~~~~~--~~~~~r~~~~~~ 319 (325)
.++|||.|+++ +.+++|++|+|-
T Consensus 606 ~~~EPw~fg~~~~v~~~~r~~i~lR 630 (875)
T 3l4y_A 606 KDQDPASFGADSLLLNSSRHYLNIR 630 (875)
T ss_dssp CCCSGGGGCTTCHHHHHHHHHHHHH
T ss_pred CCCCCeecCCchHHHHHHHHHHHHH
Confidence 89999999987 799999999874
|
| >3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-83 Score=650.35 Aligned_cols=317 Identities=32% Similarity=0.634 Sum_probs=287.2
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||||||+|.++++|++++++|++++||||++|+|++|+.++++|+||+ +||||++|+++||++|+|++++|
T Consensus 287 mpP~WalGy~qsR~~Y~~~~ev~~vv~~~r~~~IPlDvi~~Didym~~~~~FT~d~-~FPdp~~mv~~Lh~~G~k~v~ii 365 (908)
T 3top_A 287 MVPYWSLGFQLCRYGYQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSP-KFAGFPALINRMKADGMRVILIL 365 (908)
T ss_dssp CCCGGGGSCEECCTTCCSHHHHHHHHHHHHHHTCCCCEEEECGGGSSTTCTTCCCG-GGTTHHHHHHHHHHHTCEEEEEE
T ss_pred CCChhhhhcccccccCCCHHHHHHHHHHHHHcCCCeeeEEeeccccccccccccCC-CCCCHHHHHHHHHHCCCEEEEEe
Confidence 89999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCccccCC--CccccccccccceeeecCC-CCceeeeecCC---------------------CccCCCCCChHHHHHHHH
Q 020492 81 DPGIKHED--GYFVYDSGSKIDVWIQKAD-GTPFIGEVWPG---------------------PCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 81 ~P~i~~~~--~~~~~~~~~~~~~~~~~~~-g~~~~~~~w~g---------------------~~~~~Df~~p~a~~w~~~ 136 (325)
+|+|..++ +|..|+++.++++|+|+++ |++++|.+||| .++++||+||+|++||.+
T Consensus 366 dP~I~~~~~~~Y~~y~eg~~~g~fvk~~~gg~~~~g~vWpG~~~v~~d~~~~~~~~~~~~~~~~~fpDftnp~ar~WW~~ 445 (908)
T 3top_A 366 DPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVWPDFPDVVVNGSLDWDSQVELYRAYVAFPDFFRNSTAKWWKR 445 (908)
T ss_dssp CSCEECCCCSCCHHHHHHHHHTCBCBCSSSCCBCEEEEEEECSSCCCCTTSCHHHHHHHTEEEEECBCTTSHHHHHHHHH
T ss_pred CCcccCCCCCCCHHHHHHHhCCcEEEcCCCCceeeEeccCCCcccccccccccccccccccCccccccCCCHHHHHHHHH
Confidence 99998764 3889999999999999998 78999999998 678999999999999999
Q ss_pred HHHhhhh--------CCccEEEecCCCCCccCCCCC---------CCCCC---------CccCCCCCC--------Cccc
Q 020492 137 LVKDFIY--------NGVDGIWNDMNEPAVFKSVTK---------TMPES---------NIHRGDDEI--------GGCQ 182 (325)
Q Consensus 137 ~~~~~~~--------~Gvdg~~~D~~e~~~~~~~~~---------~~P~~---------~~~~~~~~~--------~~~~ 182 (325)
+++.+++ .||||+|+|||||+.|+.... ..|+. ..+....++ |+..
T Consensus 446 ~~~~~~~~~~~~~~~~gvdg~W~DmnEPs~F~~g~~~~~~~~~~l~~ppy~p~~~~~~~~l~~~t~~~~~~~~~~dG~~~ 525 (908)
T 3top_A 446 EIEELYNNPQNPERSLKFDGMWIDMNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSSKTLCMESQQILPDGSLV 525 (908)
T ss_dssp HHHHHHSCSSCGGGCCCCSEEEECSTTTCCSSSSSSSSCCCCTTTSSCSSCCSCTTGGGTTTTTSCCTTCEEECSSSCEE
T ss_pred HHHHHHhccccccccCCccEEEEecCCccccccccccccCccccccCCcccccccccccccccccccccceeeccCCCcc
Confidence 9998885 799999999999999864321 01111 111111111 1123
Q ss_pred ccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCccccc
Q 020492 183 NHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPD 262 (325)
Q Consensus 183 ~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~D 262 (325)
.|.++||+|++++++|+||++++. +++|||++|||+|+|+|||+++|+||+.++|++|+.+|+++|++||+|+||||+|
T Consensus 526 ~h~~vHNlYg~~~~~atye~l~~~-~~~RpfilsRS~~aGsqry~~~WtGDn~s~W~~L~~si~~~L~~~lsG~p~~g~D 604 (908)
T 3top_A 526 QHYNVHNLYGWSQTRPTYEAVQEV-TGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSIIGMMEFSLFGISYTGAD 604 (908)
T ss_dssp EHHHHGGGHHHHHHHHHHHHHHHH-HSSCCCEEESSCCTTGGGTCEEECCCCBSSTHHHHHHHHHHHHHHHHTCCSEECB
T ss_pred chhhhhhhhHHHHHHHHHHHHHhc-cCCCceEEEeccccCCCCccceeCCchhhhHHHHHHHHHHHHHHhhcCCccccCc
Confidence 577899999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHHHHh
Q 020492 263 IGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF 319 (325)
Q Consensus 263 igGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~~~ 319 (325)
||||.+++++|||+||+|+|||+|+||+|+..+...+|||.|++++.+++|++|++-
T Consensus 605 IgGF~g~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lR 661 (908)
T 3top_A 605 ICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQDPVSWDVAFVNISRTVLQTR 661 (908)
T ss_dssp TTCSBSCCCHHHHHHHHHHHTTSSSCEECCCSSSCCCSGGGSCHHHHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHhcCCcceeccCCCCCCCcCCccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988788999999999999999999874
|
| >2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-82 Score=636.79 Aligned_cols=314 Identities=35% Similarity=0.758 Sum_probs=291.6
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeee
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~ 80 (325)
|||+||||||+|+|+|.++++|+++++++++++||+|++++|++|+.++++|+||+++||||++|+++||++|+|+++|+
T Consensus 171 ~pP~WalG~~qsr~~y~~~~ev~~v~~~~~~~~IP~dvi~lD~~y~~~~~dft~d~~~FPdp~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 171 LPPMWAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPEPKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp CCCGGGGSEEEEETTCCSHHHHHHHHHHHHHTTCCEEEEEECGGGSBTTBTTCCCTTTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred CCcccccCccccCCcCCCHHHHHHHHHHHHHcCCCcceEEEecceecCCccceEChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccC
Q 020492 81 DPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFK 160 (325)
Q Consensus 81 ~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~ 160 (325)
+|+|..++.|.+|+++.+ +|+++++|+++++.+|+|.++++||+||+|++||.++++++++.||||||+|+|||+.|+
T Consensus 251 ~P~I~~~~~y~~y~e~~~--~fvk~~~G~~~~g~~W~g~~~~~Dftnp~a~~ww~~~~~~l~~~GiDg~w~DmnEp~~f~ 328 (693)
T 2g3m_A 251 DHGIRVDQNYSPFLSGMG--KFCEIESGELFVGKMWPGTTVYPDFFREDTREWWAGLISEWLSQGVDGIWLDMNEPTDFS 328 (693)
T ss_dssp CSCEECCTTCHHHHHHTT--SBCEETTSSBCEEEETTEEEECBCTTSHHHHHHHHHHHHHHHTTTCCEEEECSTTTCCCH
T ss_pred cCcccCCCCcHHHHHHHh--heEECCCCCEEEEEeCCCCeeeeCCCCHHHHHHHHHHHHHHHhcCCcEEEEecCCccccc
Confidence 999999887889998877 999999999999999999999999999999999999999999999999999999998875
Q ss_pred CC-------------------CCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccC
Q 020492 161 SV-------------------TKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFI 221 (325)
Q Consensus 161 ~~-------------------~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~ 221 (325)
.. ..++|.++.|... +....|.++||+|+++++++++|++++..+ +||++++||+++
T Consensus 329 ~~~~~~~~~~~~p~~~~~~~~~~t~p~d~~~~~~---g~~~~~~~~hN~Y~~~~~~a~~e~l~~~~~-~RpfilsRS~~a 404 (693)
T 2g3m_A 329 RAIEIRDVLSSLPVQFRDDRLVTTFPDNVVHYLR---GKRVKHEKVRNAYPLYEAMATFKGFRTSHR-NEIFILSRAGYA 404 (693)
T ss_dssp HHHHHHHHHTTSCSCBCCCGGGGSCCTTEEEEET---TEEEEHHHHGGGHHHHHHHHHHHHHHHTTC-CSCCEEESCEET
T ss_pred ccccccccccCCcccccccccccccCccceeccC---CCcccHHHhhhhhhHHHHHHHHHHHHhhCC-CCcEEEEccccC
Confidence 31 0346655554321 111357889999999999999999998876 999999999999
Q ss_pred CCCcceeeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCC------CChhHHHHHHHhhcccccccccCCCC
Q 020492 222 GSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN------ATPRLFGRWMGIGAMFPFCRGHTESD 295 (325)
Q Consensus 222 G~qr~~~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~------~~~eL~~RW~q~~af~P~~r~h~~~~ 295 (325)
|+|||+++|+||+.++|++|+.+|+++|++||+|+|+||+|||||.++ +++|||+||+|+|||+|+||+|+..+
T Consensus 405 Gsqry~~~W~GD~~s~W~~L~~~i~~~L~~~l~G~p~~g~DIGGF~g~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~ 484 (693)
T 2g3m_A 405 GIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATD 484 (693)
T ss_dssp TGGGTCEEECCSCCCSHHHHHHHHHHHHHHHTTTCCSEECEETCSCCSSSSCCCCCHHHHHHHHHHTTTCSCEEECCCTT
T ss_pred CCCCCccccCCCcccCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccCCCCCHHHHHHHHHHhccchheeeccCCC
Confidence 999999999999999999999999999999999999999999999998 89999999999999999999999877
Q ss_pred CCCCCccccChhhHHHHHHHHHHhh
Q 020492 296 AIDHEPWSFGEEVLFCSSIVIIAFF 320 (325)
Q Consensus 296 ~~~~~Pw~~~~~~~~~~r~~~~~~~ 320 (325)
+.++|||.|++++.+++|++|+|.-
T Consensus 485 ~~~~ePw~~~~~~~~~~r~~i~lRy 509 (693)
T 2g3m_A 485 GIDTEPVFLPDYYKEKVKEIVELRY 509 (693)
T ss_dssp SCCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred CCCCcCeecChHHHHHHHHHHHHHH
Confidence 7899999999999999999999753
|
| >4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-80 Score=630.65 Aligned_cols=302 Identities=29% Similarity=0.562 Sum_probs=283.2
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC-----CceeeeecCCCCCChHHHHHHHHHCCCE
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD-----GFRCFTFDKERFPDPKSLAADLHLNGFK 75 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~~~~f~~d~~~FPd~~~~~~~L~~~G~k 75 (325)
|||+||||||||||+|.++++|+++++++++++||||++|+|++|+. .+++|+||+++||||++|+++||++|+|
T Consensus 258 lpP~WalG~~~sr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPdp~~mv~~Lh~~G~k 337 (817)
T 4ba0_A 258 LPPRWALGSFASRFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPTPLDMMADFKQQGVK 337 (817)
T ss_dssp CCCGGGGSBEECCBCCCSHHHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSCHHHHHHHHHHTTCE
T ss_pred CCCccccCcceecccCCCHHHHHHHHHHHHHhCCCCcEEEEcccccCCccccccCccccccccCCCHHHHHHHHHHCCCE
Confidence 79999999999999999999999999999999999999999999973 4789999999999999999999999999
Q ss_pred EEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 76 AIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 76 ~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
+++|++|+|..++ ..|+++.++++|+++++|+++.+.+|+|.++++||+||+|++||.++++.+.+.||||||+|+||
T Consensus 338 ~vl~i~P~I~~~s--~~y~e~~~~g~~vk~~~G~~~~~~~w~G~~~~~DftnP~ar~ww~~~~~~l~~~GvDg~W~DmnE 415 (817)
T 4ba0_A 338 TVLITEPFVLTSS--KRWDDAVKAKALAKDPQGQPKAFELYFGNGGIIDVFSKEGSRWFSSIYKDLSKQGVAGWWGDLGE 415 (817)
T ss_dssp EEEEECSEEETTS--TTHHHHHHTTCBCBCTTSSBCCEEETTEEEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred EEEEeCCCccCCc--HHHHHHHhCCEEEECCCCCeEEEEecCCCceeecCCCHHHHHHHHHHHHHHHhCCCcEEEecCCC
Confidence 9999999998765 47999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCccee-eecCCC
Q 020492 156 PAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAA-TWTGDN 234 (325)
Q Consensus 156 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~-~w~GD~ 234 (325)
|+. +|.+..|.+ + .|.++||+|++++++++||++++..+++|||+++||+|+|+|||++ +|+||+
T Consensus 416 p~~-------~p~d~~~~~-----g--~~~~~hN~Y~~~~~~a~~e~~~~~~~~~RpfilsRs~~aGsqry~~~~WsGDn 481 (817)
T 4ba0_A 416 PEM-------HPEDTQHAI-----G--DADTVHNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFVGSQRYGMIPWTGDV 481 (817)
T ss_dssp TSS-------CCTTCEETT-----E--EHHHHGGGHHHHHHHHHHHHHHHHCTTSCCCEEESCCCTTGGGGTEEEBCCSC
T ss_pred CCc-------CCccccccC-----C--CHHHhhhHHHHHHHHHHHHHHHHhcCCCccEEEECcccCccccCCccCcCCcc
Confidence 986 355555532 2 5788999999999999999999988899999999999999999996 899999
Q ss_pred CCCchHHHHHHHHHHHccccCCCcccccCCCCCCC--CChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHH
Q 020492 235 VSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGN--ATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCS 312 (325)
Q Consensus 235 ~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~--~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~ 312 (325)
.++|++|+.+|+++|++||+|+||||+|||||.++ +++|||+||+|+|||+|+||+|+.. ..++|||.|++++.+++
T Consensus 482 ~s~W~~L~~~i~~~L~~~lsG~p~~g~DIGGF~g~~~~~~EL~~RW~Q~gaF~P~~R~H~~~-~~~~epw~~~~~~~~~~ 560 (817)
T 4ba0_A 482 SRTWGGLASQVELALQMSLLGFGYIHSDLGGFADGETLDKEMYIRWLQYGVFQPVYRPHGQD-HIPSEPVFQDEETKAIL 560 (817)
T ss_dssp BSSHHHHHTHHHHHHHHHHTTCTTCBCCBTCCBCCSSCCHHHHHHHHHHHHTSSCBCBCCBT-TSCCSGGGSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCccccCcCCCCCCCCCCHHHHHHHHHhhcCCceeEecCCC-CCCCCCcccCcHHHHHH
Confidence 99999999999999999999999999999999997 7999999999999999999999974 35899999999999999
Q ss_pred HHHHHHh
Q 020492 313 SIVIIAF 319 (325)
Q Consensus 313 r~~~~~~ 319 (325)
|++|+|-
T Consensus 561 r~~i~lR 567 (817)
T 4ba0_A 561 RPLVKLR 567 (817)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999974
|
| >2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-75 Score=589.68 Aligned_cols=300 Identities=24% Similarity=0.456 Sum_probs=275.9
Q ss_pred CCCccchhhhhhcCC--CCCHHHHHHHHHHHHhcCCCceEEEEecccCCCc--eeeeecCCCCCChHHHHHHHHHCCCEE
Q 020492 1 MPPKWSLGYHQCRWS--YDSDKRVREICRTFREKGIPCDVIWMDIDYMDGF--RCFTFDKERFPDPKSLAADLHLNGFKA 76 (325)
Q Consensus 1 lpP~walG~~~s~~~--y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~--~~f~~d~~~FPd~~~~~~~L~~~G~k~ 76 (325)
|||+||||||+|+.. ..++++|+++++++++++||+|++++|++|+.++ ++|+||+++||||++|+++||++|+|+
T Consensus 263 lpP~walG~w~s~~y~~~y~e~~v~~v~~~~r~~~IP~dvi~lD~~w~~~~~w~dft~d~~~FPdp~~mv~~Lh~~G~k~ 342 (773)
T 2f2h_A 263 LPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKI 342 (773)
T ss_dssp CCCGGGGSEEEECCSSSCCCHHHHHHHHHHHHHTTCCCCEEEECGGGBCTTCCSSCCBCTTTCSCHHHHHHHHHHTTCEE
T ss_pred cCCccccCcEEeccccCCCCHHHHHHHHHHHHHcCCCeeEEEECcccccccccccceEChhhCCCHHHHHHHHHHCCCEE
Confidence 799999999999842 2378999999999999999999999999999865 599999999999999999999999999
Q ss_pred EeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCC
Q 020492 77 IWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEP 156 (325)
Q Consensus 77 ~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~ 156 (325)
++|++|+|..++ .+|+++.++++|+++++|+++.+.+|++..+++||+||+|++||.++++.+++.|||+||+|+||+
T Consensus 343 ~l~i~P~I~~~s--~~y~e~~~~g~~vk~~~G~~~~~~~w~g~~~~~DftnP~a~~ww~~~~~~l~d~Gvd~~w~D~~e~ 420 (773)
T 2f2h_A 343 CVWINPYIGQKS--PVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGER 420 (773)
T ss_dssp EEEECSEECTTS--TTHHHHHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred EEEecCCcCCCC--HHHHHHHHCCceeECCCCCeeeeeecCCCceeeCCCCHHHHHHHHHHHHHHHhcCCCEEEccCCCC
Confidence 999999998765 589999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCC
Q 020492 157 AVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236 (325)
Q Consensus 157 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s 236 (325)
. |.+..+.. +. .+.++||+|++++++++|+++++..+.+||++++||+++|+|||+++|+||+.+
T Consensus 421 ~---------p~d~~~~~-----g~-~~~~~hN~y~~~~~~a~~e~l~~~~~~~rp~ilsRS~~aGsqRy~~~WsGDn~s 485 (773)
T 2f2h_A 421 I---------PTDVQWFD-----GS-DPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 485 (773)
T ss_dssp C---------CSSSBCTT-----CC-CHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCS
T ss_pred C---------CcceeecC-----CC-CHHHhcchhHHHHHHHHHHHHHHhcCCCCceEEeecccCccCCCceEeCCCCcc
Confidence 3 33332211 11 356899999999999999999988777899999999999999999999999999
Q ss_pred CchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHH
Q 020492 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI 316 (325)
Q Consensus 237 ~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~ 316 (325)
+|++|+.+|+++|++|++|+||||+|||||.+++++|||+||+|+|+|+|+||+|+.. ..|+||.|++++.+++|++|
T Consensus 486 ~W~~L~~si~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~ePw~~~~~~~~~~r~~i 563 (773)
T 2f2h_A 486 NYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFFT 563 (773)
T ss_dssp SHHHHHHHHHHHHHHHTTTCCCEEEETTCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhccCCccccCCcCCcCCCCCHHHHHHHHHhhhCCHhhhhccCC--CCcCCccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999874 46899999999999999999
Q ss_pred HHh
Q 020492 317 IAF 319 (325)
Q Consensus 317 ~~~ 319 (325)
+|.
T Consensus 564 ~lR 566 (773)
T 2f2h_A 564 QLK 566 (773)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
|
| >2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-73 Score=586.27 Aligned_cols=310 Identities=27% Similarity=0.429 Sum_probs=268.9
Q ss_pred CCCccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC--CceeeeecCCCCCChHHHHHHHHHCCCEEEe
Q 020492 1 MPPKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD--GFRCFTFDKERFPDPKSLAADLHLNGFKAIW 78 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~--~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~ 78 (325)
|||+||||||+|+|+|.++++|+++++++++++||||+|++|++|+. ++++|+||+++||||++|+++||++|+|+++
T Consensus 429 mpP~WalG~wqsr~~Y~sq~ev~~va~~~re~gIPlDvi~lD~~y~~~~~~~dFtwD~~rFPdp~~mv~~Lh~~G~k~vl 508 (1020)
T 2xvl_A 429 MLPKWAYGFWQSRERYKSSDEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWGSHDFDKQFFPDPKALVDKVHAMNAQIMI 508 (1020)
T ss_dssp CCCGGGGSEEECCTTCCSHHHHHHHHHHHHHTTCCCCEEEECSCCSCTTCTTSCCCCTTTCSCHHHHHHHHHHTTCEEEE
T ss_pred CCCcceeceeeecCCCCCHHHHHHHHHHHHHcCCCcceEEEeccccccCcccceEEChhhCCCHHHHHHHHHHCCCEEEE
Confidence 79999999999999999999999999999999999999999999985 4899999999999999999999999999999
Q ss_pred eeCCccccCCCccccccccccceeeecCCCCceeeeecCCC-ccCCCCCChHHHHHHHHHH-HhhhhCCccEEEecCCCC
Q 020492 79 MLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGP-CVFPDYTQSKVRSWWGSLV-KDFIYNGVDGIWNDMNEP 156 (325)
Q Consensus 79 ~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~-~~~~Df~~p~a~~w~~~~~-~~~~~~Gvdg~~~D~~e~ 156 (325)
|++|+|..++ ..|+++.+++++++.+.+..+.+.+|+|. ..++||+||++++||.+.+ +.+.+.||||||+|+|||
T Consensus 509 ~V~P~I~~~s--~~Y~e~~~~G~~v~~~~~~~~~~w~wpG~~~~v~DftNPear~~ww~~l~~~l~~~GiDg~W~DmnEp 586 (1020)
T 2xvl_A 509 SVWPKFYPTT--DNYKELNAKGFMFNRNLDEKNLDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVHGFDAWWLDAVEP 586 (1020)
T ss_dssp EECSEECTTS--HHHHHHHHTTCEETHHHHTTCCCSSTTCCCCEEECTTSHHHHHHHHHHHHHHTGGGTCCEEEECCTTT
T ss_pred EECCccCCCc--hhHHHHHhCCCEEEcCCCCccccccCCCCCceeeCCCChHHHHHHHHHHHHHhhhcCCcEEEecCCCc
Confidence 9999998754 58999999999998876655666678886 2344999999999765555 567789999999999999
Q ss_pred CccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCccee-eecCCCC
Q 020492 157 AVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAA-TWTGDNV 235 (325)
Q Consensus 157 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~-~w~GD~~ 235 (325)
+.+.... .+...........+ .+.++||+|++++++++||++++..+++|||+++||+|+|+|||++ +|+||+.
T Consensus 587 s~~~~~d--~~~~~~l~~~~~~G---~~~~vhNlY~~~~~~atye~l~~~~~~kRpfilsRS~~aGsQRy~~~~WsGDn~ 661 (1020)
T 2xvl_A 587 DIHSNLT--FEKRKWLMTPNARG---NGAEIFNAYAVPHAEGVYQGELATDGDKRSFILTRSGFGGIQRTGSAIWSGDIV 661 (1020)
T ss_dssp CSSTTBC--HHHHHHTTCSBTTB---CGGGGTTCTHHHHHHHHHHHHHHHCTTSCCCEEESCCCTTGGGGTEEEECCSCB
T ss_pred cccCCCC--ccccccccCcccCC---chhhhcchhhHHHHHHHHHHHHHhcCCCceEEEEecccCCCCcCceeeeCCccC
Confidence 8763211 11000000000011 3678999999999999999999987889999999999999999999 9999999
Q ss_pred CCchHHHHHHHHHHHccccCCCcccccCCCCC-------------------CCCC----hhHHHHHHHhhcccccccccC
Q 020492 236 SNWEHLHMSISMVLQLGLSGQPFSGPDIGGFD-------------------GNAT----PRLFGRWMGIGAMFPFCRGHT 292 (325)
Q Consensus 236 s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~-------------------~~~~----~eL~~RW~q~~af~P~~r~h~ 292 (325)
++|++|+.+|+++|++||+|+||||+|||||. ++++ +|||+||+|+|||+|+||+|+
T Consensus 662 ssW~~L~~sI~~~L~~glsGip~~g~DIGGF~~~~~y~~~~~~~~~~~~g~g~~d~~~~~EL~~RW~Q~GaF~P~~R~H~ 741 (1020)
T 2xvl_A 662 SRWSDMKDQIAAGIGTNLAGVTNWTFDIGGFTPEDRFRHGKKGFVGSWTALDAEQVDEWQELNTRWYQFGAFVPLYRSHG 741 (1020)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCCEECCBTCSBCCHHHHEETTEECSSGGGSCGGGHHHHHHHHHHHHHHHTTSSSEEECC
T ss_pred chHHHHHHHHHHHHHHhhcCCceeecccCCCccccccccccccccccccccCCCCCCCCHHHHHHHHHHhcCCHHHhhcc
Confidence 99999999999999999999999999999997 4443 899999999999999999999
Q ss_pred CCCCCCCCccccChh---hHHHHHHHHHHh
Q 020492 293 ESDAIDHEPWSFGEE---VLFCSSIVIIAF 319 (325)
Q Consensus 293 ~~~~~~~~Pw~~~~~---~~~~~r~~~~~~ 319 (325)
.. .+||||.|+++ +.+++|++|+|.
T Consensus 742 ~~--~~~EPW~f~~eg~~~~~~~r~~i~lR 769 (1020)
T 2xvl_A 742 QN--PYREIFNIADEGTEVYNAMVWYTKLR 769 (1020)
T ss_dssp SS--SCCSHHHHSCTTSHHHHHHHHHHHHH
T ss_pred CC--CCccceeecCccHHHHHHHHHHHHHH
Confidence 85 67999999877 999999999975
|
| >2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-72 Score=582.29 Aligned_cols=318 Identities=26% Similarity=0.492 Sum_probs=267.7
Q ss_pred CCCccchhhhhhcCCCCC-----------HHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCC----------
Q 020492 1 MPPKWSLGYHQCRWSYDS-----------DKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERF---------- 59 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~-----------~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~F---------- 59 (325)
|||+||||||||||+|.+ +++|++++++|++++||||+||+|++|+.++++|+||+++|
T Consensus 349 lpP~WalGy~qsR~gY~s~~~~~y~~~~~~~~v~~vv~~~r~~~IPlDvi~lDidymd~~r~FT~D~~~~~~~~~~~~~f 428 (1027)
T 2x2h_A 349 MPPKYVFGFFQGVFGTSSLLRAHMPAGENNISVEEIVEGYQNNNFPFEGLAVDVDMQDNLRVFTTKGEFWTANRVGTGGD 428 (1027)
T ss_dssp CCCGGGGSCEEEEECCCBSSGGGCCCCTTCCBHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCGGGBTTSSCCCSCC
T ss_pred CCCHHHhhcccccccccccccccccccccHHHHHHHHHHHHHcCCCCcceEEecccccCCCccccccccCchhhcccccC
Confidence 899999999999999863 46899999999999999999999999999999999887664
Q ss_pred CChHHHHHHHHHCCCEEEeeeCCccccC---CCccccccccccceeeecCC-----------C--CceeeeecCC-----
Q 020492 60 PDPKSLAADLHLNGFKAIWMLDPGIKHE---DGYFVYDSGSKIDVWIQKAD-----------G--TPFIGEVWPG----- 118 (325)
Q Consensus 60 Pd~~~~~~~L~~~G~k~~~~~~P~i~~~---~~~~~~~~~~~~~~~~~~~~-----------g--~~~~~~~w~g----- 118 (325)
|||++|+++||++|+|++++++|+|..+ +.|.+|+++.++++|+++++ | .+|++.+|+|
T Consensus 429 Pdp~~mv~~Lh~~G~k~v~iidP~i~~~~~~~~y~~~~e~~~~g~fvk~~~~~~~~~~~~~dG~~~~y~g~vWpg~~~~g 508 (1027)
T 2x2h_A 429 PNNRSVFEWAHDKGLVCQTNITCFLRNDNEGQDYEVNQTLRERQLYTKNDSLTGTDFGMTDDGPSDAYIGHLDYGGGVEC 508 (1027)
T ss_dssp TTSCBHHHHHHHTTCEEEEEECSCEECCCTTCCCHHHHHHHHTTCBCBSCCSSCCCCCCCTTCCTTBCCEEEECSTTCEE
T ss_pred CCHHHHHHHHHhCCeEEEEEecceeccCCcccccHHHHHHHhCCeEEecCccCcccccccCCCCCcceeeeeccCCCccC
Confidence 8999999999999999999999999875 35788899999999999763 4 5799999987
Q ss_pred CccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCC-CCC---CCCccCCCCC-----------------
Q 020492 119 PCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK-TMP---ESNIHRGDDE----------------- 177 (325)
Q Consensus 119 ~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~-~~P---~~~~~~~~~~----------------- 177 (325)
.+++|||+||++++||.++++++++.||||||+|||||+.|+.... .++ ......+...
T Consensus 509 ~~~~pDFtnp~a~~WW~~~~k~l~~~GvDg~W~DmnEPs~f~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~y~p~~~~~ 588 (1027)
T 2x2h_A 509 DALFPDWGRPDVAEWWGNNYKKLFSIGLDFVWQDMTVPAMMPHKIGDDINVKPDGNWPNADDPSNGQYNWKTYHPQVLVT 588 (1027)
T ss_dssp EEECBCTTSTTHHHHHHHTTHHHHTTTCCEEEECSTTTCCCCCBTTSCTTCCCCTTCSBTTBCCTTCBCTTSSCTTCEEE
T ss_pred ceeccCCCCHHHHHHHHHHHHHHhhCCCCEEEEcCCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999999998863110 010 0000000000
Q ss_pred -----CCcccccccccchhHHHHHHHH-HHHHHh----hcCCCCcEEEEccccCCCCcceeeecCCCCCCchHHHHHHHH
Q 020492 178 -----IGGCQNHSYYHNVYGMLMARST-YEGMKL----ADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 247 (325)
Q Consensus 178 -----~~~~~~~~~~hn~y~~~~~~~~-~e~~~~----~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s~W~~L~~~i~~ 247 (325)
..+...+...||+|++.+.+++ ++++.+ ..+++||||+|||+|+|+|||+++|+||+.++|++|+.+|++
T Consensus 589 ~~~~~~~g~~~~~~~~n~~~~~~~~at~~eg~~~~~~~l~~~kRpfilsRs~~aGsqRy~~~WsGDn~s~W~~L~~si~~ 668 (1027)
T 2x2h_A 589 DMRYENHGREPMVTQRNIHAYTLCESTRKEGIVENADTLTKFRRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIAN 668 (1027)
T ss_dssp CSSSTTSCEEEGGGTGGGHHHHHHHHHHHHTTTTTGGGCCSCSCCCEEESCEETTGGGTCEEECCSCCSSHHHHHHHHHH
T ss_pred cccccccCcccchhhhHHHHHHHHHHHHHHHhhhhhhhcccCcceEEEeccccCccCCcccccCCcccccchhHHHHHHH
Confidence 0011112345899998888887 577643 246799999999999999999999999999999999999999
Q ss_pred HHHccccCCCcccccCCCCCC--------CCChhHHHHHHHhhcccccccccCC-------CCCCCCCccccChhhHHHH
Q 020492 248 VLQLGLSGQPFSGPDIGGFDG--------NATPRLFGRWMGIGAMFPFCRGHTE-------SDAIDHEPWSFGEEVLFCS 312 (325)
Q Consensus 248 ~l~~~l~G~~~~g~DigGf~~--------~~~~eL~~RW~q~~af~P~~r~h~~-------~~~~~~~Pw~~~~~~~~~~ 312 (325)
+|++||||+||||+|||||.+ ..++|||+||+|+|||+|+||+|+. .+...||||.|+++ .+++
T Consensus 669 ~L~~~lsG~p~~g~DIgGF~g~~~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~~~~~ePw~~~~~-~~~~ 747 (1027)
T 2x2h_A 669 NINMNMSCLPLVGSDIGGFTSYDNENQRTPCTGDLMVRYVQAGCLLPWFRNHYDRWIESKDHGKDYQELYMYPNE-MDTL 747 (1027)
T ss_dssp HHHHHHTTCCSEECCTTCSSCCCSSCTTCCCCHHHHHHHHHHHTTSSSCEEEEEBCBTTBCCSBSCCCGGGCTTT-HHHH
T ss_pred HHHHHhcCCCcccCCcCccCCCCcccccCCCCHHHHHHHHHhhcCCceeEeccCcccccccCCCCcccccccCcH-HHHH
Confidence 999999999999999999998 3589999999999999999999974 23468999999877 5899
Q ss_pred HHHHHHh
Q 020492 313 SIVIIAF 319 (325)
Q Consensus 313 r~~~~~~ 319 (325)
|++|+|.
T Consensus 748 r~~i~lR 754 (1027)
T 2x2h_A 748 RKFVEFR 754 (1027)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=218.40 Aligned_cols=276 Identities=13% Similarity=0.106 Sum_probs=186.1
Q ss_pred chhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCCC-------ceeeeecCCCCCC-hHHHHHHHHHCCCEEE
Q 020492 6 SLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMDG-------FRCFTFDKERFPD-PKSLAADLHLNGFKAI 77 (325)
Q Consensus 6 alG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-------~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~ 77 (325)
.+.-|.+.....|+++|+++++.+++.|+ +.|+||++|+.. .++|.+|+++||+ ++.+++++|++|+|++
T Consensus 336 ~wnsW~~~~~~~~ee~v~~~ad~~~~~G~--~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~G 413 (732)
T 2xn2_A 336 LVNNWEATYFDFNEDKLKTIVDKAKKLGL--EMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFG 413 (732)
T ss_dssp EEECHHHHTTCCCHHHHHHHHHHHHHTTC--CEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEEE
T ss_pred EEEchhhhccCCCHHHHHHHHHHHHHcCC--cEEEEcCcccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEEE
Confidence 34556666566799999999999998875 899999999853 3789999999998 9999999999999999
Q ss_pred eeeCCc-cccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCC
Q 020492 78 WMLDPG-IKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 78 ~~~~P~-i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e 155 (325)
+|+.|. +..++ .+|++ .++++++.+++.. .|.....++|++||++++|+.+.+.+++ ++|||++|+|+++
T Consensus 414 lW~~P~~v~~~S--~l~~~--hpdw~~~~~g~~~----~~~~~~~~LD~t~Pev~~~i~~~l~~~~~~~GVD~~K~D~~~ 485 (732)
T 2xn2_A 414 LWFEPEMISYES--NLYKE--HPDYLXHVPGRKP----CPSRNQYVLELGRKEVRDNIFEQMVKILDSKKIDYIKWDMNR 485 (732)
T ss_dssp EEECTTEECSSS--HHHHH--CGGGBCCCTTSCC----CCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred EEeCccccCCCC--HHHHh--CchheecCCCCCC----ccCCceEEEcCCCHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 999997 44444 46653 4457666654321 2333567799999999999999988766 6999999999997
Q ss_pred CCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCC-------Cccee
Q 020492 156 PAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGS-------QRYAA 228 (325)
Q Consensus 156 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~-------qr~~~ 228 (325)
+.. ...+.+ ..+ ....+.+. .+.+++|+.+++.....+++++.++++.|. ++.+.
T Consensus 486 ~~~----------~~~~~~---~~~----~~~~~~~~-~y~~~~y~~~~~l~~~~p~i~~~~C~~Gg~r~d~g~l~~~~~ 547 (732)
T 2xn2_A 486 SLS----------DIYESD---LPA----DQQGEAYH-RYVLGYYDLLNKLVTRYPDILFEGCSGGGGRFDVGQAYYTPQ 547 (732)
T ss_dssp CCC----------SCCCTT---SCG----GGGGGHHH-HHHHHHHHHHHHHHHHCTTSEEEECBTBBTTCSHHHHTTCSE
T ss_pred ccc----------ccCCCC---CCc----cchhhHHH-HHHHHHHHHHHHHHHhCCCcEEEEecCcccccCchhhcccce
Confidence 531 011110 101 01112222 234454444433322345677776666553 45567
Q ss_pred eecCCCCCCchHHHHHHHHHHHccccCC--CcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccCh
Q 020492 229 TWTGDNVSNWEHLHMSISMVLQLGLSGQ--PFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGE 306 (325)
Q Consensus 229 ~w~GD~~s~W~~L~~~i~~~l~~~l~G~--~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~ 306 (325)
+|++|+.++|+.+ +|...+++..-+. ..+.+++++........+-.|. +++.|.|+. ..-+|+.+++
T Consensus 548 ~W~sD~~d~~~r~--~i~~g~s~~~P~~~~~~~~~~~pn~~~~r~t~~e~R~-~~al~~~l~--------~~~dl~~l~~ 616 (732)
T 2xn2_A 548 IWASDNTDAIERL--KIQYGTSLVYPQSMMTSHVSVSPNEQNGRITPFNTRG-AVAMWGDLG--------YELDLTKMSD 616 (732)
T ss_dssp EECBSCCCHHHHH--HHHHHHTTTSCGGGEEEEEECSSCTTTCCCCCHHHHH-HHHTTSEEE--------EESCGGGCCH
T ss_pred EECCCCcCHHHHH--HHhcchhhcCCcccCCCCEEeeCCCCCCCCCHHHHHH-HHHHHHHhh--------cCCChhhCCH
Confidence 9999999999876 3444444322221 1123455554332233345676 467777654 2458999999
Q ss_pred hhHHHHHHHHHHhh
Q 020492 307 EVLFCSSIVIIAFF 320 (325)
Q Consensus 307 ~~~~~~r~~~~~~~ 320 (325)
+..+++++.+.++.
T Consensus 617 e~~~~l~~~~~l~k 630 (732)
T 2xn2_A 617 EESDQVVKQVTEYK 630 (732)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=205.46 Aligned_cols=150 Identities=17% Similarity=0.206 Sum_probs=127.8
Q ss_pred CCccchh--hhhhcC----CCCCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCE
Q 020492 2 PPKWSLG--YHQCRW----SYDSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFK 75 (325)
Q Consensus 2 pP~walG--~~~s~~----~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k 75 (325)
||+|+.+ +..|.| .+.|+++|+++++.++ ++|++.|+||++|+...++|++|+++||+++.|+++||++|+|
T Consensus 188 ~p~w~~~~P~gwnsW~~~~~~~te~~v~~~ad~~~--~~G~~~~~IDdgW~~~~Gdw~~d~~kFP~lk~lvd~lh~~Glk 265 (564)
T 1zy9_A 188 NARVPKHTPTGWCSWYHYFLDLTWEETLKNLKLAK--NFPFEVFQIDDAYEKDIGDWLVTRGDFPSVEEMAKVIAENGFI 265 (564)
T ss_dssp TCCCCSSCCEEEESHHHHGGGCCHHHHHHHHHHGG--GTTCSEEEECTTSEEETTEEEEECTTCCCHHHHHHHHHHTTCE
T ss_pred CCccccCCceEEcchhccCcCCCHHHHHHHHHHHH--hcCCcEEEECcccccccCCcccCcccCCCHHHHHHHHHHCCCE
Confidence 6888755 333444 3458999999999998 6888999999999999999999999999999999999999999
Q ss_pred EEeeeCCccccCCCccccccccccceeeecCCCCc-eeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 76 AIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTP-FIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 76 ~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+++|+.|++...++ .+|++ .+++++++ +|.+ ..+..|++...++|++||++++||.+.++.+.++||||+|+|++
T Consensus 266 ~Giw~~P~~v~~~S-~ly~~--~pdw~v~~-~G~~~~~~~~W~~~~~~lD~t~P~a~~~~~~~~~~~~~~GVD~iK~D~~ 341 (564)
T 1zy9_A 266 PGIWTAPFSVSETS-DVFNE--HPDWVVKE-NGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKMGYRYFKIDFL 341 (564)
T ss_dssp EEEEECTTEEETTC-HHHHH--CGGGBCEE-TTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHHTTCCEEEECCG
T ss_pred EEEEeCCCccCCCC-hhHHh--CCCeEEec-CCeeeeeecccCCceeecCCCCHHHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999998654332 46664 67899998 6765 34678999999999999999999999999998899999999998
Q ss_pred CCC
Q 020492 155 EPA 157 (325)
Q Consensus 155 e~~ 157 (325)
++.
T Consensus 342 ~~~ 344 (564)
T 1zy9_A 342 FAG 344 (564)
T ss_dssp GGG
T ss_pred CCc
Confidence 753
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-22 Score=198.89 Aligned_cols=278 Identities=15% Similarity=0.135 Sum_probs=176.5
Q ss_pred chhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC-------CceeeeecCCCCCC-hHHHHHHHHHCCCEEE
Q 020492 6 SLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD-------GFRCFTFDKERFPD-PKSLAADLHLNGFKAI 77 (325)
Q Consensus 6 alG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~ 77 (325)
.+.-|.+.+...|+++|+++++.+++.|+ +.|+||++|++ ..++|.+|+++||+ ++.+++.+|++|+|++
T Consensus 333 ~wNsW~~~~~d~tee~il~~ad~~~~~G~--e~fviDDGW~~~r~~d~~~~Gdw~~d~~kFP~Gl~~lv~~ih~~Glk~g 410 (745)
T 3mi6_A 333 LINNWEATYFDFNEAKLMTIVNQAKRLGI--EMFVLDDGWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVHQQGMKFG 410 (745)
T ss_dssp EEECHHHHTTCCCHHHHHHHHHHHHHHTC--CEEEECTTCBTTCSSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEE
T ss_pred EEEchHhhCcCCCHHHHHHHHHHHHHcCC--cEEEECcccccCCCCCcccCCCceeChhhcCccHHHHHHHHHHCCCEEE
Confidence 33445555555689999999999999987 58999999983 46899999999999 5999999999999999
Q ss_pred eeeCC-ccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCC
Q 020492 78 WMLDP-GIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 78 ~~~~P-~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e 155 (325)
+|+.| .|..++ .+|++ .++++++.++|.+..+ ....++|++||+|++|+.+.+++++ ++||||||+|+|+
T Consensus 411 lW~~Pe~v~~dS--~l~~~--hPdw~l~~~~g~~~~~----r~~~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~nr 482 (745)
T 3mi6_A 411 LWFEPEMVSVDS--DLYQQ--HPDWLIHAPKSTPTPG----RHQFVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNR 482 (745)
T ss_dssp EEECTTEECSSS--SHHHH--CGGGBCCCTTCCCCCS----SSCEEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCS
T ss_pred EEEcccccCCCC--HHHHh--CcceEEEcCCCceeec----CCeEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 99999 566655 46764 4668888887765432 2467899999999999999999877 6899999999998
Q ss_pred CCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcC-CCCcEEEEccccCCC-------Ccce
Q 020492 156 PAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADK-DKRPFVLTRAGFIGS-------QRYA 227 (325)
Q Consensus 156 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~-~~r~~~~srs~~~G~-------qr~~ 227 (325)
... +..+. ..+. ....+. ...+.++.|+.+.+.+. ....+|-+.|+. |. ++.+
T Consensus 483 ~i~----------~~~~~---~~~~----~~q~~~-~~~y~~g~y~ll~~l~~~~P~v~ie~CssG-GgR~D~g~L~~~~ 543 (745)
T 3mi6_A 483 YAT----------EMFSS---RLTS----DQQLEL-PHRYILGVYQLYARLTQAYPNVLFESCASG-GGRFDLGMMYYAP 543 (745)
T ss_dssp CCC----------SCCCS---SSCG----GGGGGH-HHHHHHHHHHHHHHHHHHCTTCEEEECSTT-TSSCSHHHHHHSS
T ss_pred CCc----------ccCCC---cCcc----ccccHH-HHHHHHHHHHHHHHHHhhCCCeEEEecCCC-CCccChhHHhcCC
Confidence 632 11111 0111 111222 22346666666655432 233444444432 22 3445
Q ss_pred eeecCCCCCCchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChh
Q 020492 228 ATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 307 (325)
Q Consensus 228 ~~w~GD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~ 307 (325)
.+|++|+...-+.|+.|-.+.+-+-.+=+.-..+++---.......|=.|-.- |++-.|- ..-.|-..+++
T Consensus 544 ~~W~SD~tDa~eRl~IQ~GtS~~yP~~~mgaHvs~~Pnh~t~R~~~l~~R~~v--Am~G~~G-------~eldl~~ls~~ 614 (745)
T 3mi6_A 544 QAWTSDDTDAAERLLIQFGTSYGYPQAMMGAHVSAVPNDQMGRITSLKTRGAV--AFFGDLG-------YELDITKMAPT 614 (745)
T ss_dssp EEECCSCCCHHHHHHHHHHHTTTSCGGGEEEEEECSSCTTTCCCCCHHHHHHH--HTSSEEE-------EESCSTTCCHH
T ss_pred ccccCCCCCHHHHHHHHcccchhhCHHHHhccccCCccccCCCcCCHHHHHHH--HhccCce-------eeeChhhCCHH
Confidence 69999998755555554443332211111111111110001112234445431 2222221 23455566788
Q ss_pred hHHHHHHHHHHhhh
Q 020492 308 VLFCSSIVIIAFFW 321 (325)
Q Consensus 308 ~~~~~r~~~~~~~~ 321 (325)
..+.+|+.|.+|.=
T Consensus 615 e~~~~~~~i~~YK~ 628 (745)
T 3mi6_A 615 ELDQVKKQVAFYKC 628 (745)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88999999988863
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=201.45 Aligned_cols=272 Identities=13% Similarity=0.108 Sum_probs=174.8
Q ss_pred CccchhhhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccCC-------CceeeeecCCCCCC-hHHHHHHHHHCCC
Q 020492 3 PKWSLGYHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYMD-------GFRCFTFDKERFPD-PKSLAADLHLNGF 74 (325)
Q Consensus 3 P~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~~~~f~~d~~~FPd-~~~~~~~L~~~G~ 74 (325)
|...+.-|.+.+...|+++|+++++.+++.|+ +.|+||++|+. ..++|.+|+++||+ ++.+++++|++|+
T Consensus 329 ~p~~~nsW~~~~~~~~e~~i~~~ad~~~~~G~--~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Gl 406 (720)
T 2yfo_A 329 RPVLINSWEAAYFDFTGDTIVDLAKEAASLGI--DMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGM 406 (720)
T ss_dssp CCCEEEHHHHHTTCCCHHHHHHHHHHHHHHTC--CEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTC
T ss_pred CCeEEEchHHhCcCCCHHHHHHHHHHHHHcCC--cEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCC
Confidence 33455667666666799999999999999986 89999999974 35899999999999 8999999999999
Q ss_pred EEEeeeCCcc-ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEec
Q 020492 75 KAIWMLDPGI-KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWND 152 (325)
Q Consensus 75 k~~~~~~P~i-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D 152 (325)
|+++|+.|++ ..++ .+|+ ..++++++.+++.+..+ ....++|++||++++|+.+.+++++ ++|||++|+|
T Consensus 407 k~GlW~~P~~v~~~S--~l~~--~hpdw~~~~~~~~~~~~----~~~~~LD~t~Pea~~~~~~~l~~l~~~~GIDy~K~D 478 (720)
T 2yfo_A 407 KFGIWIEPEMINEDS--DLYR--AHPDWAIRIQGKKPVRS----RNQLLLDFSRKEVRDCVFDQICVVLDQGKIDYVKWD 478 (720)
T ss_dssp EEEEEECTTEECSSS--HHHH--HCGGGBCCCTTSCCCCB----TTBEEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEEC
T ss_pred EEEEEecccccCCCC--HHHH--hCcceEEECCCcCcccC----CceEEECCCCHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 9999999964 4433 4665 34568887766654321 2456799999999999999998877 6999999999
Q ss_pred CCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCC------CCcc
Q 020492 153 MNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIG------SQRY 226 (325)
Q Consensus 153 ~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G------~qr~ 226 (325)
++.... ...+. + . +|+.+..+ ..+.+.+++.. ...++.++++..| .+++
T Consensus 479 ~n~~~~----------~~~~~------~----~-~~~y~~~~--y~l~~~l~~~~--p~v~~e~C~~GG~r~D~g~l~~~ 533 (720)
T 2yfo_A 479 MNRSMA----------DVYAG------N----L-SYDYVLGV--YDFMERLCSRY--PDLLLEGCSGGGGRFDAGMLYYS 533 (720)
T ss_dssp CCSCCC----------SCCST------T----H-HHHHHHHH--HHHHHHHHHHS--TTCEEEECBTBBTTCSHHHHTTC
T ss_pred CCCCcc----------ccCCc------c----H-HHHHHHHH--HHHHHHHHHhC--CCcEEEeccCCCCccccccceec
Confidence 975321 11110 1 0 22221111 11234444432 2234444443211 2455
Q ss_pred eeeecCCCCCCchHHHHHHHHHHHc--cccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCcccc
Q 020492 227 AATWTGDNVSNWEHLHMSISMVLQL--GLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSF 304 (325)
Q Consensus 227 ~~~w~GD~~s~W~~L~~~i~~~l~~--~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~ 304 (325)
+.+|++|+...|+.++.+-.+.+-+ +..|.. .+++-+.......+|-.|+. + |+++.+. ..-.|...
T Consensus 534 ~~~W~sD~~da~er~~iq~g~s~~yP~~~~~~h--v~~~P~h~~~r~~~l~~R~~-~-a~~g~l~-------~~~dl~~l 602 (720)
T 2yfo_A 534 PQIWCSDNTDAINRTRIQYGTSFFYPVSAMGAH--VSAVPNHQTGRVTSFHTRGV-T-AMAGTFG-------YELNPALL 602 (720)
T ss_dssp SEEECBSCCCHHHHHHHHHHHTTTSCGGGEECC--EECSSCTTTCCCCCHHHHHH-H-HTTTTCC-------EESCGGGS
T ss_pred ccEecCCCCCHHHHHhhhccccccCCHhHhccc--eeccccccccCcChHHHHHH-H-HHhccCc-------cccChhhC
Confidence 6799999988776666443222110 111110 01111111112345678875 3 3333332 23467888
Q ss_pred ChhhHHHHHHHHHHhh
Q 020492 305 GEEVLFCSSIVIIAFF 320 (325)
Q Consensus 305 ~~~~~~~~r~~~~~~~ 320 (325)
+++..++++++|.+|+
T Consensus 603 s~e~~~~l~~~i~~~k 618 (720)
T 2yfo_A 603 SDEEKQQIREQIKTYK 618 (720)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8899999999999885
|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-18 Score=173.30 Aligned_cols=132 Identities=15% Similarity=0.260 Sum_probs=107.8
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC-------CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD-------GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
.|++.|+++++.+++.|+ +.|+||++|+. +.++|..|++|||+ ++.+++.+|++|+|+++|+.|.+....
T Consensus 343 ~~e~~i~~~ad~aa~lG~--e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~GmkfGLW~epe~v~~~ 420 (729)
T 4fnq_A 343 FNEEKLVNIAKTEAELGI--ELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGMQFGLWVEPEMVSPN 420 (729)
T ss_dssp CCHHHHHHHHHHHHHHTC--CEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEEECTTEECSS
T ss_pred CCHHHHHHHHHHHHhcCc--cEEEEcceeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCCEEEEEeeccccCCC
Confidence 489999999999998875 89999999975 35789999999999 799999999999999999999765543
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCCCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNEPA 157 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e~~ 157 (325)
+ .+|+ ..+++.+..+++.+..+ .....+|+++|++++|+.+.+.+++ ++|||++|+|+|.+.
T Consensus 421 S-~l~~--~hPdw~~~~~~~~~~~~----r~q~~LD~~~P~v~~y~~~~i~~ll~~~GidYiK~D~n~~~ 483 (729)
T 4fnq_A 421 S-ELYR--KHPDWCLHVPNRPRSEG----RNQLVLDYSREDVCDYIIETISNVLASAPITYVKWDMNRHM 483 (729)
T ss_dssp S-HHHH--HCGGGBCCCTTSCCCCB----TTBEEBCTTSHHHHHHHHHHHHHHHTTTTCCEEEEECCCCC
T ss_pred c-HHHH--hCchheeccCccCCccC----CccccccCCChhHHHHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 3 4565 45666666666544322 2456799999999999999998877 489999999998754
|
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=152.05 Aligned_cols=198 Identities=18% Similarity=0.163 Sum_probs=133.1
Q ss_pred CCCHHHHHHHHHHHHhcCC---CceEEEEecccCCC-----------------ceeeeecCCCCCC------hHHHHHHH
Q 020492 16 YDSDKRVREICRTFREKGI---PCDVIWMDIDYMDG-----------------FRCFTFDKERFPD------PKSLAADL 69 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~~-----------------~~~f~~d~~~FPd------~~~~~~~L 69 (325)
..|++.|++.++.+ +.++ .++.|+||++|+.. .++|.+|+++||+ ++.+++.+
T Consensus 25 ~i~e~~i~~~ad~~-~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~~~~~d~~G~~~~~~~kFP~~~~~~Gl~~l~~~i 103 (433)
T 3cc1_A 25 SVTEEEVLGNAEYM-ANHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAI 103 (433)
T ss_dssp CCCHHHHHHHHHHH-HHHTGGGTCCEEEECSCTTCCCTTSTTCCTTSCSCBCTTSCBCCCTTTCGGGTTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHH-HhcchhhCCeEEEECCCcCCCCCcccccccccccccCCCCCEeECCccCCCcccCCCHHHHHHHH
Confidence 35899999999999 3332 24899999999864 6789999999998 99999999
Q ss_pred HHCCCEEEeeeCCcccc---CCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCc
Q 020492 70 HLNGFKAIWMLDPGIKH---EDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGV 146 (325)
Q Consensus 70 ~~~G~k~~~~~~P~i~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gv 146 (325)
|++|+|+++|+.|.+.. ....+++.+ ++.+++.. .+.....|......+|+++|++++|+.+.++.+.++||
T Consensus 104 h~~Glk~Giw~~p~i~~~~v~~~s~~~~~----~~~~~di~-~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~l~~~Gv 178 (433)
T 3cc1_A 104 HDLGLKFGIHIMRGIPRQAVYENSPVLGS----TKTAREIA-HTNSICPWNTDMYGVDPTKEGAQSYYNSLFELYAQWGV 178 (433)
T ss_dssp HHTTCEEEEEEESSEEHHHHHHTCBCTTS----SCBHHHHE-ETTCCBTTBTTEEEECTTSTTHHHHHHHHHHHHHHTTC
T ss_pred HHcCCeeEEEeCCCCchhccCCCCccccc----cceecccc-cCCcccCCCCCceeecCCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999998721 111134421 33211100 00011123344556999999999999998888889999
Q ss_pred cEEEecCCCCCccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccC-----
Q 020492 147 DGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFI----- 221 (325)
Q Consensus 147 dg~~~D~~e~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~----- 221 (325)
|++|+|++-... +. + .. ... .+++.+++++. .|+++++-+...
T Consensus 179 DyvK~D~~~~~~-------~~------------~----~~-~~~-----~~~~~~aL~~~---gr~i~~slc~g~~~~~~ 226 (433)
T 3cc1_A 179 DFVKVDDIAASR-------LY------------D----TH-LEE-----IKMIQRAIQAC---GRPMVLSLSPGPAPIKY 226 (433)
T ss_dssp CEEEEESCSCTT-------SS------------C----CC-HHH-----HHHHHHHHHHS---SSCCEEECCCSBSSEES
T ss_pred CEEEeCCccccc-------CC------------c----cc-HHH-----HHHHHHHHHhc---CCCEEEEecCCCCChhh
Confidence 999999874311 10 0 00 111 24556677643 578887654311
Q ss_pred --CCCcceeee--cCCCCCCchHHHHHHHHHHHc
Q 020492 222 --GSQRYAATW--TGDNVSNWEHLHMSISMVLQL 251 (325)
Q Consensus 222 --G~qr~~~~w--~GD~~s~W~~L~~~i~~~l~~ 251 (325)
-..+++..| ++|...+|+.+...+......
T Consensus 227 ~~~~~~~~n~wR~s~D~~~~w~~~~~~~~~~~~~ 260 (433)
T 3cc1_A 227 AHHFKTNANMWRITDDFWDDWSLLYQMFERCEVW 260 (433)
T ss_dssp CSSSCCTTGGGCCEECCCSCHHHHHHHHHHHHHH
T ss_pred hhhhhhhCcEEEeccCccccHHHHHHHHHHHHHH
Confidence 113455566 789999999988777655433
|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=121.99 Aligned_cols=164 Identities=21% Similarity=0.256 Sum_probs=109.0
Q ss_pred CCCHHHHHHHHHHHHhcCCC---ceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 16 YDSDKRVREICRTFREKGIP---CDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~iP---~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
-.|++.|++.++.+.+.|++ ++.|+||++|+. ..++|.+|+++||+ ++.+++.+|++|+|+++|+.|.....
T Consensus 22 ~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~ 101 (362)
T 1uas_A 22 GINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTC 101 (362)
T ss_dssp CCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCT
T ss_pred CCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeCCCccc
Confidence 35899999999999776654 799999999986 46899999999998 99999999999999999999863211
Q ss_pred CCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCC
Q 020492 88 DGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMP 167 (325)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P 167 (325)
. .+ +|.+..+..+..+.+.++|||++|+|++...
T Consensus 102 ~------------------~~------------------~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~---------- 135 (362)
T 1uas_A 102 S------------------NK------------------MPGSLDHEEQDVKTFASWGVDYLKYDNCNDA---------- 135 (362)
T ss_dssp T------------------SS------------------SBCCTTCHHHHHHHHHHHTCCEEEEECCCCT----------
T ss_pred c------------------CC------------------CCCchhHHHHHHHHHHHcCCCEEEECccCCC----------
Confidence 0 00 1111223445566677899999999986311
Q ss_pred CCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEE--ccccCC----CCcceeee--cCCCCCCch
Q 020492 168 ESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLT--RAGFIG----SQRYAATW--TGDNVSNWE 239 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~s--rs~~~G----~qr~~~~w--~GD~~s~W~ 239 (325)
+ . .....|. .+.+++++.. |+++++ +++..- ...|+..| ++|+..+|+
T Consensus 136 ------~---~-------~~~~~y~-----~~~~al~~~~---~~i~~~~c~~g~~~p~~w~~~~~n~~R~~~D~~~~w~ 191 (362)
T 1uas_A 136 ------G---R-------SVMERYT-----RMSNAMKTYG---KNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWG 191 (362)
T ss_dssp ------T---C-------CHHHHHH-----HHHHHHHHHC---TTSEEEEESTTTTCGGGTGGGTCSEEECSSCCCSSHH
T ss_pred ------C---C-------CHHHHHH-----HHHHHHHhhC---CCcEEEecCCCCCChHHHHhhheeEEEecCCCCcCch
Confidence 0 0 0112232 3456666543 455543 322111 01233344 589999999
Q ss_pred HHHHHHHHHH
Q 020492 240 HLHMSISMVL 249 (325)
Q Consensus 240 ~L~~~i~~~l 249 (325)
.+...+....
T Consensus 192 ~~~~~~~~~~ 201 (362)
T 1uas_A 192 SMTSRADEND 201 (362)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9887765444
|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.4e-12 Score=120.43 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHhcC---CCceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 16 YDSDKRVREICRTFREKG---IPCDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~---iP~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
-.|++.|++.++.+.+.| ++++.|+||++|+. ..++|.+|+++||+ ++.+++.+|++|+|+++|+.|.....
T Consensus 22 ~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~pg~~tc 101 (397)
T 3a5v_A 22 NVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTC 101 (397)
T ss_dssp GCCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCT
T ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEEEEEecCCCCcc
Confidence 358999999999999966 44789999999997 57899999999998 99999999999999999999863211
Q ss_pred CCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 88 DGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
. + ....+|+.+++ .+.+.++|||++|+|++.
T Consensus 102 ~-------------------~----------~pg~~~~~~~~--------~~~~~~wGvdyvK~D~~~ 132 (397)
T 3a5v_A 102 G-------------------G----------HIASLGYEDID--------AKTWAKWGIDYLKYDNCY 132 (397)
T ss_dssp T-------------------S----------CBCCTTCHHHH--------HHHHHHHTCCEEEEECTT
T ss_pred C-------------------C----------CHHHHHHHHHH--------HHHHHHcCCCEEEECCCc
Confidence 1 1 12235666664 345557999999999974
|
| >3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-12 Score=120.69 Aligned_cols=161 Identities=20% Similarity=0.260 Sum_probs=111.4
Q ss_pred CCHHHHHHHHHHHHhcCC---CceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 17 DSDKRVREICRTFREKGI---PCDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
-|++.|++.++.+.+.|+ .++.|+||++|+. ..+++..|+++||+ ++.+++.+|++|+|+++|+.|......
T Consensus 33 i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~ 112 (404)
T 3hg3_A 33 ISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCA 112 (404)
T ss_dssp SSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred cCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCccccC
Confidence 379999999999876654 4799999999986 36789999999999 899999999999999999887543221
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPE 168 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~ 168 (325)
+ .||. ..+..+..+.+.++|||++|.|.+-...
T Consensus 113 ~--------------------------~pGs-----------~~~~~~da~~fa~WGvDylK~D~C~~~~---------- 145 (404)
T 3hg3_A 113 G--------------------------FPGS-----------FGYYDIDAQTFADWGVDLLKFAGCYCDS---------- 145 (404)
T ss_dssp S--------------------------SBCC-----------TTCHHHHHHHHHHHTCCEEEEECCSCSC----------
T ss_pred C--------------------------CCcc-----------HHHHHHHHHHHHHhCCcEEEecCcCCCc----------
Confidence 1 0111 1233344566778999999999863110
Q ss_pred CCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccc--c-CCC--------Ccceeee--cCCCC
Q 020492 169 SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAG--F-IGS--------QRYAATW--TGDNV 235 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~--~-~G~--------qr~~~~w--~GD~~ 235 (325)
.......| +++.+++++ ..||++++.+- + .|. +.++..| ++|+.
T Consensus 146 ---------------~~~~~~~y-----~~m~~AL~~---tGRpi~~sc~w~~~~~~~~~~~~~~~~~~~n~WR~~~Di~ 202 (404)
T 3hg3_A 146 ---------------LENLADGY-----KHMSLALNR---TGRSIVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADID 202 (404)
T ss_dssp ---------------HHHHHHHH-----HHHHHHHHH---TTCCCEEEECTGGGGTTTSCCCHHHHHHHCSEEECSCCCC
T ss_pred ---------------chhHHHHH-----HHHHHHHHh---cCCCEEEEeCCCcccccccccchHHHhhhCcEEEecCCcC
Confidence 00012223 244556654 45899998542 1 122 2455566 79999
Q ss_pred CCchHHHHHHHH
Q 020492 236 SNWEHLHMSISM 247 (325)
Q Consensus 236 s~W~~L~~~i~~ 247 (325)
.+|+.+..++..
T Consensus 203 d~W~sv~~i~~~ 214 (404)
T 3hg3_A 203 DSWKSIKSILDW 214 (404)
T ss_dssp SSHHHHHHHHHH
T ss_pred cchHHHHHHHHH
Confidence 999998887753
|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-12 Score=122.16 Aligned_cols=67 Identities=18% Similarity=0.193 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHhcCCC---ceEEEEecccCCC----ceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCc
Q 020492 17 DSDKRVREICRTFREKGIP---CDVIWMDIDYMDG----FRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPG 83 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP---~d~i~iD~~w~~~----~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~ 83 (325)
.|++.|++.++.+.+.|+. ++.|+||++|+.. .++|..|+++||+ ++.+++.+|++|+|+++|+.|.
T Consensus 26 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~~g 100 (417)
T 1szn_A 26 IDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAG 100 (417)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEESS
T ss_pred CCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEeCCC
Confidence 4899999999999665543 7899999999863 6889999999999 8999999999999999998764
|
| >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-11 Score=116.61 Aligned_cols=159 Identities=18% Similarity=0.235 Sum_probs=108.1
Q ss_pred CCCHHHHHHHHHHHHhcCC---CceEEEEecccCC---CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 16 YDSDKRVREICRTFREKGI---PCDVIWMDIDYMD---GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 16 y~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~---~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
..|++.|++.++.+.+.|+ +++.|+||++|+. ..+++..|+++||+ ++.+++.+|++|+|+++|+.|......
T Consensus 43 ~i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~~rd~~G~~~~d~~kFP~Glk~Lad~ih~~GlKfGIw~~pG~~tC~ 122 (479)
T 3lrk_A 43 DVSEQLLLDTADRISDLGLKDMGYKYIILDDCWSSGRDSDGFLVADEQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCA 122 (479)
T ss_dssp CCCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEEEECTTSCEEECTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCCHHHHHHHHHHHHhcCccccCceEEEECCccccccCCCCCEecChhhcCCCHHHHHHHHHHCCCeeEEEecCcccccc
Confidence 3589999999999999664 5789999999985 56899999999998 999999999999999999999643211
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPE 168 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~ 168 (325)
+ .|| .+++... ..+.+.++|||++|.|++....
T Consensus 123 ~--------------------------~pG---sl~~~~~--------da~~fa~WGVDylK~D~c~~~~---------- 155 (479)
T 3lrk_A 123 G--------------------------YPG---SLGREEE--------DAQFFANNRVDYLKYDNCYNKG---------- 155 (479)
T ss_dssp S--------------------------SBC---CTTCHHH--------HHHHHHHTTCCEEEEECTTCTT----------
T ss_pred C--------------------------CCc---hhHHHHH--------HHHHHHHhCCcEEEEccCCCcc----------
Confidence 1 011 1343322 3456668999999999975321
Q ss_pred CCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCC------Ccceeee--cCCCCCCchH
Q 020492 169 SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGS------QRYAATW--TGDNVSNWEH 240 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~------qr~~~~w--~GD~~s~W~~ 240 (325)
. .+. .......| +++.+++++. .||++++=+.+.-. +.++..| ++|+..+|+.
T Consensus 156 ~---~~~--------~~~~~~~y-----~~m~~AL~~t---GRpI~~Slc~Wg~~~~~~w~~~~~n~WR~s~DI~d~W~~ 216 (479)
T 3lrk_A 156 Q---FGT--------PEISYHRY-----KAMSDALNKT---GRPVFYSLCNWGQDLTFYWGSGIANSWRMSGDVTAEFTR 216 (479)
T ss_dssp C---CSS--------HHHHHHHH-----HHHHHHHHHH---CSCCEEEECSTTTTTHHHHSTTTCSEEECSSCBCSCSSC
T ss_pred c---cCC--------cchhHHHH-----HHHHHHHHHh---CCCeEEEeccCccCchhhhhhhhCCeeeecCCccccccc
Confidence 0 000 00011222 3445666553 48988885443211 2345566 7999999984
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=6.4e-11 Score=117.86 Aligned_cols=109 Identities=19% Similarity=0.219 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHhcCC---CceEEEEecccCCC----ceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 17 DSDKRVREICRTFREKGI---PCDVIWMDIDYMDG----FRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~~----~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
.|++.|++.++.+.+.|+ +++.|+||++|+.. .++|..|+++||+ ++.+++.+|++|+|+++|+.|.+....
T Consensus 26 ~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~fP~gl~~l~~~i~~~Glk~gi~~~~~~~~~~ 105 (614)
T 3a21_A 26 IDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCG 105 (614)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTTSTTCHHHHHHHHHHTTCEEEEEEESSSSCHH
T ss_pred CCHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCCCCEEECccccCCcHHHHHHHHHHCCCeeEEEecCCCcccc
Confidence 489999999999865443 36899999999853 6889999999998 999999999999999999999865422
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChH--HHHHHHHHHHhhhhCCccEEEecCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSK--VRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~--a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
. .+ +++ |..+|+ +.+++.+.++.+.++|||++|+|++
T Consensus 106 ~--~~------------p~~---------------~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~ 144 (614)
T 3a21_A 106 Y--YY------------PTG---------------RPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWC 144 (614)
T ss_dssp H--HS------------CSS---------------SCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECH
T ss_pred c--cC------------CCC---------------CCCCCchhhHHHHHHHHHHHHHcCCcEEEeccc
Confidence 0 11 111 234444 5566666777777899999999986
|
| >4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=9.3e-10 Score=103.91 Aligned_cols=69 Identities=22% Similarity=0.205 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHhcCC---CceEEEEecccCC---CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCcccc
Q 020492 18 SDKRVREICRTFREKGI---PCDVIWMDIDYMD---GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~---~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~ 86 (325)
+++.|++.++.+.+.|+ ..+.|+||++|++ ..+++..|++|||+ ++.+++.+|++|+|+++|..|....
T Consensus 34 se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~~rd~~G~~~~d~~rFP~G~k~ladyih~~Glk~Giy~~~~~~~ 109 (400)
T 4do4_A 34 SEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYADMGNFT 109 (400)
T ss_dssp SHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEEEECTTCCEEECTTTSTTCHHHHHHHHHHTTCEEEEEEEBSSBC
T ss_pred cHHHHHHHHHHHHHCcchhhCCeEEEECCCcccCCCCCCCEeECcccCCcccHHHHHHHHHCCceEEEecCCCCcc
Confidence 58999999999888764 5799999999975 46789999999998 8999999999999999998886443
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00057 Score=68.57 Aligned_cols=130 Identities=8% Similarity=0.042 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCC-----------------ce-----------eeeecCCCCCC---hHHHH
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDG-----------------FR-----------CFTFDKERFPD---PKSLA 66 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-----------------~~-----------~f~~d~~~FPd---~~~~~ 66 (325)
+-..|.+.++.+++.|| ++|+|-+-+... .+ .+..|+ +|.. +++||
T Consensus 251 d~~gi~~~LdyLk~LGv--t~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp-~~Gt~edfk~LV 327 (695)
T 3zss_A 251 TFRTAARRLPAIAAMGF--DVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHP-ALGTLDDFDHFV 327 (695)
T ss_dssp CHHHHGGGHHHHHHTTC--CEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCT-TTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCC--CEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCc-ccCCHHHHHHHH
Confidence 55778888889888886 888886533211 01 134443 4553 68999
Q ss_pred HHHHHCCCEEEeeeCCccccCCCccccccccccceeeecCCCCceee----eecCCCccCCCCCC--hHHHHHHHHHHHh
Q 020492 67 ADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIG----EVWPGPCVFPDYTQ--SKVRSWWGSLVKD 140 (325)
Q Consensus 67 ~~L~~~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~w~g~~~~~Df~~--p~a~~w~~~~~~~ 140 (325)
+.+|++|+++++-+.+.-..+. +.++ ...++|...++|...-. ..|.+ ..-+||.| |++++++.+.++.
T Consensus 328 ~~aH~~GI~VilD~V~Nhs~~~--~~~~--~~~dwf~~~~dg~~~~~~~~~~~~~~-~~dLn~~n~~p~V~~~l~~~l~~ 402 (695)
T 3zss_A 328 TEAGKLGLEIALDFALQCSPDH--PWVH--KHPEWFHHRPDGTIAHAENPPKKYQD-IYPIAFDADPDGLATETVRILRH 402 (695)
T ss_dssp HHHHHTTCEEEEEECCEECTTS--THHH--HCGGGSCCCTTSCCCCEEETTEEETT-CEECCCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEeeccCCccc--hhhh--cccceeeecCCCCcccCCCCCccccc-cccccccCCcHHHHHHHHHHHHH
Confidence 9999999999998776533222 2222 23566666655542111 12322 22379999 9999999999999
Q ss_pred hhhCCccEEEecCCC
Q 020492 141 FIYNGVDGIWNDMNE 155 (325)
Q Consensus 141 ~~~~Gvdg~~~D~~e 155 (325)
+++.|||||-+|...
T Consensus 403 Wi~~GVDGfRlD~a~ 417 (695)
T 3zss_A 403 WMDHGVRIFRVDNPH 417 (695)
T ss_dssp HHHTTCCEEEESSGG
T ss_pred HHHhCCCEEEecCcc
Confidence 888999999999753
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00036 Score=66.47 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----------Cc--eee-eecCCCCC---ChHHHHHHHHHCCCEEEeee
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----------GF--RCF-TFDKERFP---DPKSLAADLHLNGFKAIWML 80 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----------~~--~~f-~~d~~~FP---d~~~~~~~L~~~G~k~~~~~ 80 (325)
+-..|.+.++.+++.|+ ++|++-+-+.. ++ .+| ..|+ +|- ++++|++++|++|+|+++-+
T Consensus 28 ~~~~i~~~l~yl~~lG~--~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~-~~Gt~~~~~~lv~~~h~~Gi~vi~D~ 104 (449)
T 3dhu_A 28 NFAGVTADLQRIKDLGT--DILWLLPINPIGEVNRKGTLGSPYAIKDYRGINP-EYGTLADFKALTDRAHELGMKVMLDI 104 (449)
T ss_dssp SHHHHHTTHHHHHHHTC--SEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCG-GGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHhHHHHHHcCC--CEEEECCcccccccCCCCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 55777888888888886 78888754421 01 121 2332 344 36899999999999999987
Q ss_pred CC-ccccCCCccccccccccceeeecCCCCcee-eeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 81 DP-GIKHEDGYFVYDSGSKIDVWIQKADGTPFI-GEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 81 ~P-~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
.+ ++..++. .+. ...++|..+.+|.... ...|.+ ..-+|+.||++++...+.++.+++. ||||-+|...
T Consensus 105 V~NH~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~w~~-~~dLn~~np~Vr~~l~~~l~~w~~~-vDGfRlDaa~ 175 (449)
T 3dhu_A 105 VYNHTSPDSV--LAT--EHPEWFYHDADGQLTNKVGDWSD-VKDLDYGHHELWQYQIDTLLYWSQF-VDGYRCDVAP 175 (449)
T ss_dssp CCSEECTTSH--HHH--HCGGGBCBCTTSCBCCSSTTCTT-CEEBCTTSHHHHHHHHHHHHHHTTT-CSEEEETTGG
T ss_pred ccCcCcCccc--hhh--cCccceEECCCCCcCCCCCCCCC-CCccCCCCHHHHHHHHHHHHHHHHh-CCEEEEEChh
Confidence 66 3333221 111 2235565555553211 112332 2347899999999999999999989 9999999753
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0057 Score=57.95 Aligned_cols=133 Identities=17% Similarity=0.232 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
.+-..|.+.++.+++.|| ++|||-+-+.. + ..+ +..|+ +|-. +++||+.+|++|+|+++-+.+ +++
T Consensus 20 Gd~~gi~~~LdyL~~LGv--~~I~L~Pi~~~~~~~GY~~~dy~~idp-~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGI--DFVWLMPVFSSISFHGYDVVDFYSFKA-EYGSEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CCHHHHHHTHHHHHHTTC--CEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred cCHHHHHHhhHHHHHcCC--CEEEeCCCcCCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 356778888888888886 88888653321 1 123 35654 5654 689999999999999997765 333
Q ss_pred cCCCcccccccc-----ccceeeecCCC---------------------CceeeeecCCCccCCCCCChHHHHHHHHHHH
Q 020492 86 HEDGYFVYDSGS-----KIDVWIQKADG---------------------TPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK 139 (325)
Q Consensus 86 ~~~~~~~~~~~~-----~~~~~~~~~~g---------------------~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~ 139 (325)
.+.. -+.++. ..++++....+ ..|.+..| ....-+|+.||++++...+.++
T Consensus 97 ~~~~--~f~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~w~~~~~~~~y~~~f~-~~~pdln~~np~V~~~l~~~~~ 173 (441)
T 1lwj_A 97 FLHT--WFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFG-PFSPDLNYDNPQVFDEMKRLVL 173 (441)
T ss_dssp TTCH--HHHHHHTTCHHHHTTBCBCCTTSCTTCBCSSSCCBCEEECTTSCEEECTTC-TTSCBBCSSSHHHHHHHHHHHH
T ss_pred CchH--HHHHHhccCCCCcceeeecCCCCCCcccccCCCccccccccCCceEEcccC-CCCCccCCCCHHHHHHHHHHHH
Confidence 3221 111111 11233221110 00110001 1123478999999999999999
Q ss_pred hhhhCCccEEEecCCC
Q 020492 140 DFIYNGVDGIWNDMNE 155 (325)
Q Consensus 140 ~~~~~Gvdg~~~D~~e 155 (325)
.+++.|||||-+|...
T Consensus 174 ~wl~~gvDGfR~D~~~ 189 (441)
T 1lwj_A 174 HLLDMGVDGFRFDAAK 189 (441)
T ss_dssp HHHTTTCCEEEETTGG
T ss_pred HHHhCCCCEEEEeChh
Confidence 9888899999999864
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0017 Score=63.15 Aligned_cols=132 Identities=13% Similarity=0.221 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-.-|.+-++-+++.|| ++|||-+=+.. ++ .+ +.+|+ +|-. +++||+.+|++|+||++-+.+ +++
T Consensus 30 dl~Gi~~kLdYLk~LGv--t~I~L~Pi~~~~~~~~GYd~~dy~~vdp-~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 30 DLQGIISRLDYLEKLGI--DAIWLSPVYQSPGVDNGYDISDYEAIDP-QYGTMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CHHHHHTTHHHHHHHTC--SEEEECCCEECCCTTTTSSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHhhHHHHHCCC--CEEEeCCCcCCCCCCCCcCccCCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 45667777888888886 77887543321 11 12 45554 5654 689999999999999997765 232
Q ss_pred cCCCcccccc------ccccceee-ecC----------------------CCCceeeeecCCCccCCCCCChHHHHHHHH
Q 020492 86 HEDGYFVYDS------GSKIDVWI-QKA----------------------DGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 86 ~~~~~~~~~~------~~~~~~~~-~~~----------------------~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~ 136 (325)
.+..+ |.+ ....++++ .++ ....+......+...-+++.||++++...+
T Consensus 107 ~~~~w--f~~~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~dln~~np~v~~~i~~ 184 (549)
T 4aie_A 107 DQHKW--FVEAKKGKDNQYRDYYIWRDPVDEHEPNDLKSAFSGSAWKYDERSGQYYLHFFADQQPDLNWQNTELRQKIYN 184 (549)
T ss_dssp TTSHH--HHHHTTCTTSTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHH
T ss_pred CCcch--hhhhhhcccccccccccccCCcccCCCCCcccccCCCcccccccCCceEecccCCCCCccccCCHHHHHHHHH
Confidence 21110 000 00011111 110 000000000111233478999999999999
Q ss_pred HHHhhhhCCccEEEecCC
Q 020492 137 LVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 137 ~~~~~~~~Gvdg~~~D~~ 154 (325)
.++.+.+.|||||-+|..
T Consensus 185 ~~~~W~e~gvDGfRlD~~ 202 (549)
T 4aie_A 185 MMNFWLDKGIGGFRMDVI 202 (549)
T ss_dssp HHHHHHHTTCCEEEETTG
T ss_pred HHHHHHHhcCCceeEecH
Confidence 999888899999999975
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0037 Score=60.77 Aligned_cols=132 Identities=16% Similarity=0.228 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecccC----------C----CceeeeecC-CCCCC---hHHHHHHHHHCCCEEEeeeC
Q 020492 20 KRVREICRTFREKGIPCDVIWMDIDYM----------D----GFRCFTFDK-ERFPD---PKSLAADLHLNGFKAIWMLD 81 (325)
Q Consensus 20 ~~v~~~~~~~~~~~iP~d~i~iD~~w~----------~----~~~~f~~d~-~~FPd---~~~~~~~L~~~G~k~~~~~~ 81 (325)
+.|.+-++.++++|| ++|||-+-+. . ++..+.+|. .+|.. +++||+++|++|+|+++-+.
T Consensus 37 ~gi~~~LdyLk~LGv--t~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 37 NILRQQAATIAADGF--SAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp HHHHHHHHHHHHTTC--SEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHhcCC--CEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 677788888888886 7788765441 1 111345551 36654 68999999999999999766
Q ss_pred C-ccccCCCccccccccccceeeecC--CCCceeeeecC-----CCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEec
Q 020492 82 P-GIKHEDGYFVYDSGSKIDVWIQKA--DGTPFIGEVWP-----GPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWND 152 (325)
Q Consensus 82 P-~i~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~w~-----g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D 152 (325)
+ ++..+.....+.. ...+++.... +...+.+..|. ....-+|+.||++++...+.++.+++ .|||||-+|
T Consensus 115 ~NHt~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~~f~~~~~dLn~~np~Vr~~i~~~~~~w~~~~gvDGfRlD 193 (527)
T 1gcy_A 115 PNHMNRGYPDKEINL-PAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFD 193 (527)
T ss_dssp CSBCCTTCSSCSCCC-CSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEES
T ss_pred ecCcCCCCCCccccC-CCcchhcccccCCCCCcccCcccCccccccCCccccCCHHHHHHHHHHHHHHHHhcCCCeEEEe
Confidence 5 3333222000110 0111221110 00111112221 22334689999999999999999887 999999999
Q ss_pred CC
Q 020492 153 MN 154 (325)
Q Consensus 153 ~~ 154 (325)
..
T Consensus 194 a~ 195 (527)
T 1gcy_A 194 FV 195 (527)
T ss_dssp CG
T ss_pred cc
Confidence 75
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0017 Score=61.27 Aligned_cols=132 Identities=12% Similarity=0.066 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC---C------------Cc--eee-eecCCCCC---ChHHHHHHHHHCCCEE
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM---D------------GF--RCF-TFDKERFP---DPKSLAADLHLNGFKA 76 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~------------~~--~~f-~~d~~~FP---d~~~~~~~L~~~G~k~ 76 (325)
+-+.|.+.++.+++.|+ ++|++-+-+. . ++ .+| ..| .+|- ++++||+.+|++|+++
T Consensus 15 ~~~~i~~~l~yl~~lG~--~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~-~~~G~~~d~~~lv~~~h~~Gi~V 91 (422)
T 1ua7_A 15 SFNTLKHNMKDIHDAGY--TAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGN-RYLGTEQEFKEMCAAAEEYGIKV 91 (422)
T ss_dssp CHHHHHHTHHHHHHTTC--SEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEE-TTTEEHHHHHHHHHHHHTTTCEE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCccccccCCcCcCccCCccccccceeeeccC-CCCCCHHHHHHHHHHHHHCCCEE
Confidence 45667777888888886 7787765110 1 11 122 233 2454 3689999999999999
Q ss_pred EeeeCC-ccccCCCccccccc--cccceeeecCCCCcee------eeecCCCccCCCCCChHHHHHHHHHHHhhhhCCcc
Q 020492 77 IWMLDP-GIKHEDGYFVYDSG--SKIDVWIQKADGTPFI------GEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVD 147 (325)
Q Consensus 77 ~~~~~P-~i~~~~~~~~~~~~--~~~~~~~~~~~g~~~~------~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvd 147 (325)
++-+.| ++..+... +... ...+++.....-..+. ...|.+ ..-+|+.+|++++...+.++.+++.|||
T Consensus 92 ilD~V~NH~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dln~~~~~v~~~l~~~~~~w~~~gvD 168 (422)
T 1ua7_A 92 IVDAVINHTTFDYAA--ISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLG-LYDWNTQNTQVQSYLKRFLERALNDGAD 168 (422)
T ss_dssp EEEECCSBCCSCTTT--SCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTT-BCEECTTSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEeccCcccCCccc--cCccccCCcccccCCCCCCCcCchhcccccccCC-CCccccCCHHHHHHHHHHHHHHHHcCCC
Confidence 998766 33332211 1110 1233443211000000 111222 2347899999999999999988899999
Q ss_pred EEEecCCC
Q 020492 148 GIWNDMNE 155 (325)
Q Consensus 148 g~~~D~~e 155 (325)
||-+|...
T Consensus 169 GfR~D~~~ 176 (422)
T 1ua7_A 169 GFRFDAAK 176 (422)
T ss_dssp EEEETTGG
T ss_pred EEEEEhhh
Confidence 99999764
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0019 Score=61.78 Aligned_cols=131 Identities=17% Similarity=0.152 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..|.+.++.+++.|| ++|||-+-+.. ++ .+ +..|+ +|.. +++||+++|++|+|+++-+.+ ++..
T Consensus 48 ~~~gi~~~LdyL~~LGv--~~I~l~Pi~~~~~~~gY~~~dy~~idp-~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~ 124 (475)
T 2z1k_A 48 TLWGVAEKLPYLLDLGV--EAIYLNPVFASTANHRYHTVDYFQVDP-ILGGNEALRHLLEVAHAHGVRVILDGVFNHTGR 124 (475)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEEESSTTCCSEEEEEEECG-GGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHhHHHHHcCC--CEEEECCCcCCCCCCCcCCCCcCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 56778888888888886 77887643321 11 23 45554 5554 689999999999999997765 3332
Q ss_pred CCCccccccc-------cccceeeecC--CC-----CceeeeecCC--CccCCCCCChHHHHHHHHHHHhhhhCCccEEE
Q 020492 87 EDGYFVYDSG-------SKIDVWIQKA--DG-----TPFIGEVWPG--PCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIW 150 (325)
Q Consensus 87 ~~~~~~~~~~-------~~~~~~~~~~--~g-----~~~~~~~w~g--~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~ 150 (325)
+.. -++++ .-.++|.... .. ..|. .|.+ ...-+|+.||++++...+.++.+++.|||||-
T Consensus 125 ~~~--~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~--~~~~~~~~pdln~~np~v~~~i~~~~~~w~~~gvDGfR 200 (475)
T 2z1k_A 125 GFF--AFQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYE--AWWGNPELPKLKVETPAVREYLLAVAEHWIRFGVDGWR 200 (475)
T ss_dssp TSH--HHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBC--BGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCH--HHHHHHhcCCCCCCcceeecCCCCCcCCCCCCCcc--ccCCCCCcCccccCCHHHHHHHHHHHHHHHHCCCCEEe
Confidence 221 11111 1123443221 10 1111 1111 12347899999999999999988889999999
Q ss_pred ecCCC
Q 020492 151 NDMNE 155 (325)
Q Consensus 151 ~D~~e 155 (325)
+|...
T Consensus 201 ~D~~~ 205 (475)
T 2z1k_A 201 LDVPN 205 (475)
T ss_dssp ESSGG
T ss_pred ecccc
Confidence 99863
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0013 Score=62.99 Aligned_cols=136 Identities=17% Similarity=0.304 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccC----------C--Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEe
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYM----------D--GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIW 78 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----------~--~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~ 78 (325)
.+-..|.+.++.+++.|| ++|||-+-+. . ++ .+ +..|+ +|.. +++||+.+|++|+|+++
T Consensus 40 G~~~gi~~~LdyL~~lGv--t~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp-~~Gt~~df~~lv~~~H~~Gi~Vil 116 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGF--TAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNE-NYGTADDLKALSSALHERGMYLMV 116 (478)
T ss_dssp BCHHHHHHTHHHHHTTTC--CEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECT-TSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHhcCC--CEEEeCCcccCCccccCCCCCCCCCCcccccccCc-cCCCHHHHHHHHHHHHHCCCEEEE
Confidence 356777777888877775 7788754321 1 11 12 45554 6765 68999999999999999
Q ss_pred eeCC-ccccCCC-----ccccccccccceeee-----cCCCCceeeeecCCC----ccCCCCCChHHHHHHHHHHHhhhh
Q 020492 79 MLDP-GIKHEDG-----YFVYDSGSKIDVWIQ-----KADGTPFIGEVWPGP----CVFPDYTQSKVRSWWGSLVKDFIY 143 (325)
Q Consensus 79 ~~~P-~i~~~~~-----~~~~~~~~~~~~~~~-----~~~g~~~~~~~w~g~----~~~~Df~~p~a~~w~~~~~~~~~~ 143 (325)
-+.| ++..+.. +..+......+++-. +-+...-...+|.|. ..-+|+.||++++...+.++.+++
T Consensus 117 D~V~NH~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~g~~~~~~~dln~~~~~V~~~l~~~~~~w~~ 196 (478)
T 2guy_A 117 DVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVS 196 (478)
T ss_dssp EECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHHHHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHH
T ss_pred EECcccCCCCCCcccccccccCCCCchhhcCCCCcccCCCCCcccccccccCCCCCCCeeCcCCHHHHHHHHHHHHHHHH
Confidence 7765 2332211 111111111122211 000000001234322 234789999999999999888876
Q ss_pred -CCccEEEecCCC
Q 020492 144 -NGVDGIWNDMNE 155 (325)
Q Consensus 144 -~Gvdg~~~D~~e 155 (325)
.|||||-+|...
T Consensus 197 ~~gvDGfR~Da~~ 209 (478)
T 2guy_A 197 NYSIDGLRIDTVK 209 (478)
T ss_dssp HHTCCEEEETTGG
T ss_pred hcCCCEEEEeccc
Confidence 799999999864
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0032 Score=61.81 Aligned_cols=133 Identities=19% Similarity=0.288 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +.+|+ +|-. +++||+.+|++|+|+++-+.| +++
T Consensus 43 dl~gi~~~LdyL~~LGv--~~I~l~Pi~~~~~~~~GYd~~dy~~idp-~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 43 DIRGIIEKLDYLKSLGI--DAIWINPHYDSPNTDNGYDISNYRQIMK-EYGTMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEECCCTTTTSSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 55677777888888886 78888653321 1 123 34554 5654 689999999999999997765 333
Q ss_pred cCCCccccccc------cccceeeecC--CCCc-------eeeeecC--------------CCccCCCCCChHHHHHHHH
Q 020492 86 HEDGYFVYDSG------SKIDVWIQKA--DGTP-------FIGEVWP--------------GPCVFPDYTQSKVRSWWGS 136 (325)
Q Consensus 86 ~~~~~~~~~~~------~~~~~~~~~~--~g~~-------~~~~~w~--------------g~~~~~Df~~p~a~~w~~~ 136 (325)
.+. +-|.++ .-.++++-.. +|.+ +-+..|. ....-+|+.||++++...+
T Consensus 120 ~~~--~wf~~~~~~~~~~y~d~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~l~~ 197 (570)
T 1m53_A 120 DQH--PWFIQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLHYFARQQPDLNWDNPKVREDLYA 197 (570)
T ss_dssp TTS--HHHHHHHHCTTCTTGGGBCEECCSSSSCSSCCBCTTSSBSEEECTTTCCEEECSSCTTCCBBCTTSHHHHHHHHH
T ss_pred ccc--HHHHHhhcCCCCCCccceeecCCCCCCCCccccccCCCccccccCCCCcEEECcccCcCCccCCCCHHHHHHHHH
Confidence 221 111111 1113333211 2211 0011111 1123467899999999999
Q ss_pred HHHhhhhCCccEEEecCCC
Q 020492 137 LVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 137 ~~~~~~~~Gvdg~~~D~~e 155 (325)
.++.+++.|||||-+|...
T Consensus 198 ~~~~Wl~~gvDGfRlDa~~ 216 (570)
T 1m53_A 198 MLRFWLDKGVSGMRFDTVA 216 (570)
T ss_dssp HHHHHHTTTCCEEEETTGG
T ss_pred HHHHHHHcCCCEEEEcccc
Confidence 9999889999999999863
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0012 Score=64.43 Aligned_cols=132 Identities=18% Similarity=0.256 Sum_probs=82.0
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +.+|+ +|-. +++|++.+|++|+|+++-+.+ +++
T Consensus 29 dl~gi~~~Ldyl~~LGv--~~I~l~Pi~~~~~~~~GY~~~dy~~idp-~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (543)
T 2zic_A 29 DLKGITSKLDYLQKLGV--MAIWLSPVYDSPMDDNGYDIANYEAIAD-IFGNMADMDNLLTQAKMRGIKIIMDLVVNHTS 105 (543)
T ss_dssp CHHHHHHTHHHHHHHTC--SEEEECCCEECCCTTTTSSCSEEEEECG-GGCCHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEecCccc
Confidence 55677777788888886 78887653321 1 123 35554 5554 689999999999999997765 333
Q ss_pred cCCCccccccc------cccceeeecCC--C--Cceeeeec--------------CCCccCCCCCChHHHHHHHHHHHhh
Q 020492 86 HEDGYFVYDSG------SKIDVWIQKAD--G--TPFIGEVW--------------PGPCVFPDYTQSKVRSWWGSLVKDF 141 (325)
Q Consensus 86 ~~~~~~~~~~~------~~~~~~~~~~~--g--~~~~~~~w--------------~g~~~~~Df~~p~a~~w~~~~~~~~ 141 (325)
.+.. -|.++ .-.++++...+ . ..+-+..| .....-+|+.||++++...+.++.+
T Consensus 106 ~~~~--~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~i~~~~~~W 183 (543)
T 2zic_A 106 DEHA--WFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFW 183 (543)
T ss_dssp TTSH--HHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHHH
T ss_pred ccch--hhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCCCCccCcCCHHHHHHHHHHHHHH
Confidence 2221 12111 11234432211 1 11111111 0122346899999999999999998
Q ss_pred hhCCccEEEecCC
Q 020492 142 IYNGVDGIWNDMN 154 (325)
Q Consensus 142 ~~~Gvdg~~~D~~ 154 (325)
++.|||||-+|..
T Consensus 184 l~~GvDGfRlDa~ 196 (543)
T 2zic_A 184 IDKGIGGFRMDVI 196 (543)
T ss_dssp HTTTCCEEEETTG
T ss_pred HhcCCCEEEECCc
Confidence 8999999999975
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0034 Score=61.45 Aligned_cols=134 Identities=20% Similarity=0.304 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC-----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD-----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
.+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +..|+ +|-. +++|++.+|++|+|+++-+.| ++
T Consensus 29 Gdl~gi~~~Ldyl~~LGv--~~I~L~Pi~~~~~~~~GYd~~dy~~idp-~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NHt 105 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGI--DAIWINPHYASPNTDNGYDISDYREVMK-EYGTMEDFDRLMAELKKRGMRLMVDVVINHS 105 (557)
T ss_dssp CCHHHHHHTHHHHHHHTC--CEEEECCCEECCCTTTTSSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred cCHHHHHHHHHHHHHcCC--CEEEECCCccCCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 355777777888888886 78887653321 1 123 34554 5664 689999999999999997765 33
Q ss_pred ccCCCccccccc------cccceeeecC--CCCc-------eeeeecC--------------CCccCCCCCChHHHHHHH
Q 020492 85 KHEDGYFVYDSG------SKIDVWIQKA--DGTP-------FIGEVWP--------------GPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 85 ~~~~~~~~~~~~------~~~~~~~~~~--~g~~-------~~~~~w~--------------g~~~~~Df~~p~a~~w~~ 135 (325)
+.+.. -|.++ .-.++++-.. +|.+ +-+..|. ....-+|+.||++++...
T Consensus 106 s~~~~--wf~~~~~~~~~~y~d~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~l~ 183 (557)
T 1zja_A 106 SDQHE--WFKSSRASKDNPYRDYYFWRDGKDGHEPNNYPSFFGGSAWEKDPVTGQYYLHYFGRQQPDLNWDTPKLREELY 183 (557)
T ss_dssp CTTSH--HHHHHTTCTTCTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHH
T ss_pred ccchh--HHHHhhcCCCCCCccceEecCCcCCCCCccccccCCCccccccCCcCcEEEecccccCCccCCCCHHHHHHHH
Confidence 32211 11111 1123333211 2211 0011110 112347899999999999
Q ss_pred HHHHhhhhCCccEEEecCCC
Q 020492 136 SLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 136 ~~~~~~~~~Gvdg~~~D~~e 155 (325)
+.++..++.|||||-+|...
T Consensus 184 ~~~~~Wl~~gvDGfRlDa~~ 203 (557)
T 1zja_A 184 AMLRFWLDKGVSGMRFDTVA 203 (557)
T ss_dssp HHHHHHHTTTCCEEEETTGG
T ss_pred HHHHHHHHcCCCEEeecchh
Confidence 99998888999999999763
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0041 Score=61.47 Aligned_cols=132 Identities=14% Similarity=0.123 Sum_probs=82.2
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC--------Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD--------GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP- 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~--------~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P- 82 (325)
+-..|.+-++.++++|| ++|||-+-+.. ++ .+ +..|+ +|-. +++|++++|++|+|+++-+.+
T Consensus 146 dl~gi~~~Ldyl~~LGv--~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp-~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 146 DIRGTIDHLDYIAGLGF--TQLWPTPLVENDAAAYSYHGYAATDHYRIDP-RYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp CHHHHHHTHHHHHHTTC--CEEEESCCEECCCSSSGGGCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECccccCCCCCCCCCCcCccccccccc-cCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 56778888888888886 88988654321 11 22 34554 5654 689999999999999987665
Q ss_pred ccccCCCccccccccccceeeecCC-----C------Ccee--------eeecC-CCccCCCCCChHHHHHHHHHHHhhh
Q 020492 83 GIKHEDGYFVYDSGSKIDVWIQKAD-----G------TPFI--------GEVWP-GPCVFPDYTQSKVRSWWGSLVKDFI 142 (325)
Q Consensus 83 ~i~~~~~~~~~~~~~~~~~~~~~~~-----g------~~~~--------~~~w~-g~~~~~Df~~p~a~~w~~~~~~~~~ 142 (325)
+++.+.. -+.+....+++...+. . .++. ...|. ....-+|+.||++++...+.++.++
T Consensus 223 H~~~~~~--~~~~~p~~dw~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi 300 (601)
T 3edf_A 223 HIGKHHW--WMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWI 300 (601)
T ss_dssp BCCTTSG--GGGSCSSTTSBGGGGSCCBCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCcch--hhhhCCccCceeeCCCCCCCccccccccCCCCccccccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence 3333221 2222222233332100 0 0000 00111 1122378899999999999999888
Q ss_pred -hCCccEEEecCC
Q 020492 143 -YNGVDGIWNDMN 154 (325)
Q Consensus 143 -~~Gvdg~~~D~~ 154 (325)
+.|||||-+|..
T Consensus 301 ~~~GVDGfRlD~~ 313 (601)
T 3edf_A 301 EYAGLSGLRIDTY 313 (601)
T ss_dssp HHHTCSEEEESSG
T ss_pred hhcCCCEEEeecc
Confidence 689999999986
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0019 Score=62.05 Aligned_cols=133 Identities=15% Similarity=0.148 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
.+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +..|+ +|. ++++||+++|++|+|+++-+.+ +++
T Consensus 53 Gdl~gi~~~LdyL~~LGv--~~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 53 GDLWGIMEDLDYIQNLGI--NAIYFTPIFQSASNHRYHTHDYYQVDP-MLGGNEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp CCHHHHHHTHHHHHHHTC--CEEEESCCEEECTTCTTSEEEEEEECG-GGTHHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred cCHHHHHHhhHHHHHcCC--CEEEECCCCCCCCCCCCCCcCccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 356677888888888886 78888653321 1 123 45554 454 4799999999999999997765 333
Q ss_pred cCCCccccccc-------cccceeeecC------CCC-ceeeeecCCC--ccCCCCCChHHHHHHHHHHHhhhhCCccEE
Q 020492 86 HEDGYFVYDSG-------SKIDVWIQKA------DGT-PFIGEVWPGP--CVFPDYTQSKVRSWWGSLVKDFIYNGVDGI 149 (325)
Q Consensus 86 ~~~~~~~~~~~-------~~~~~~~~~~------~g~-~~~~~~w~g~--~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~ 149 (325)
.+. .-|+++ .-.++|.... ++. +.....|.+. ..-+|+.||++++...+.++.+++.|||||
T Consensus 130 ~~~--~~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl~~gvDGf 207 (488)
T 2wc7_A 130 RGF--FFFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWLKFGIDGW 207 (488)
T ss_dssp SSS--HHHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CcC--HHHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 222 112211 1224444321 110 1011122121 124789999999999999998889999999
Q ss_pred EecCC
Q 020492 150 WNDMN 154 (325)
Q Consensus 150 ~~D~~ 154 (325)
-+|..
T Consensus 208 R~D~~ 212 (488)
T 2wc7_A 208 RLDVP 212 (488)
T ss_dssp EESSG
T ss_pred EEecc
Confidence 99975
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0042 Score=59.63 Aligned_cols=132 Identities=17% Similarity=0.228 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHH--------HhcCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEee
Q 020492 18 SDKRVREICRTF--------REKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWM 79 (325)
Q Consensus 18 ~~~~v~~~~~~~--------~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~ 79 (325)
+-..|.+-++.+ ++.| +++|||-+-+.. + ..+ +..|+ +|.. +++|++.+|++|+|+++-
T Consensus 25 dl~gi~~~LdyL~~~~~~~~~~LG--v~~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~d~~~Lv~~aH~~Gi~VilD 101 (488)
T 1wza_A 25 DLKGIIEKLDYLNDGDPETIADLG--VNGIWLMPIFKSPSYHGYDVTDYYKINP-DYGTLEDFHKLVEAAHQRGIKVIID 101 (488)
T ss_dssp CHHHHHHTHHHHCCSCTTCCSSCC--CSEEEECCCEECSSSSCCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHhhhhhhccccchhhhcC--ccEEEECCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 456666667776 5555 588988753321 1 123 35554 4554 689999999999999997
Q ss_pred eCC-ccccCCCccccccc------cccceeeecCCC-----------Ccee--------eeecCCCccCCCCCChHHHHH
Q 020492 80 LDP-GIKHEDGYFVYDSG------SKIDVWIQKADG-----------TPFI--------GEVWPGPCVFPDYTQSKVRSW 133 (325)
Q Consensus 80 ~~P-~i~~~~~~~~~~~~------~~~~~~~~~~~g-----------~~~~--------~~~w~g~~~~~Df~~p~a~~w 133 (325)
+.+ ++..+.. -+.++ ...++++....+ .++. +..|+ ...-+|+.||++++.
T Consensus 102 ~V~NH~s~~~~--~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~~-~~pdln~~np~Vr~~ 178 (488)
T 1wza_A 102 LPINHTSERHP--WFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWS-GMPDLNYNNPEVQEK 178 (488)
T ss_dssp CCCSBCCTTSH--HHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCT-TSCBBCTTSHHHHHH
T ss_pred eccccccCccH--hhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEeccCC-CCcccccCCHHHHHH
Confidence 665 3332211 11111 112333322110 1110 00111 123478999999999
Q ss_pred HHHHHHhhhhCCccEEEecCCC
Q 020492 134 WGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 134 ~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
..+.++.+++.|||||-+|...
T Consensus 179 i~~~~~~Wl~~gvDGfR~Da~~ 200 (488)
T 1wza_A 179 VIGIAKYWLKQGVDGFRLDGAM 200 (488)
T ss_dssp HHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHcCCCChhHhhHh
Confidence 9999999888899999999865
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0038 Score=61.09 Aligned_cols=134 Identities=22% Similarity=0.317 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC-----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD-----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
.+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +..|+ +|-. +++||+.+|++|+|+++-+.+ ++
T Consensus 28 Gdl~gi~~~ldyl~~LGv--~~I~l~Pi~~~~~~~~GYd~~dy~~id~-~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~ 104 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGI--DVIWLSPVYESPNDDNGYDISDYCKIMN-EFGTMEDWDELLHEMHERNMKLMMDLVVNHT 104 (558)
T ss_dssp CCHHHHHTTHHHHHHHTC--CEEEECCCEECCCTTTTSSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CCHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 355677777788888886 78888643321 1 123 33554 5554 689999999999999997765 33
Q ss_pred ccCCCccccccc------cccceeeec-C-CCCc-------eeeeecC--------------CCccCCCCCChHHHHHHH
Q 020492 85 KHEDGYFVYDSG------SKIDVWIQK-A-DGTP-------FIGEVWP--------------GPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 85 ~~~~~~~~~~~~------~~~~~~~~~-~-~g~~-------~~~~~w~--------------g~~~~~Df~~p~a~~w~~ 135 (325)
+.+.. -|.++ .-.++++-. . +|.+ +-+..|. ....-+|+.||++++...
T Consensus 105 s~~~~--wf~~~~~~~~~~y~d~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLn~~np~Vr~~i~ 182 (558)
T 1uok_A 105 SDEHN--WFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVY 182 (558)
T ss_dssp CTTSH--HHHHHTTCTTCTTGGGBCEECCSSSSCSSCBBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTSHHHHHHHH
T ss_pred cccch--HHHHHhcCCCCCcccceEeccCcCCCCCccccccCCCccccccCCcCcEEeeccccccccccCCCHHHHHHHH
Confidence 32211 11111 011333321 1 2211 0011110 112346789999999999
Q ss_pred HHHHhhhhCCccEEEecCCC
Q 020492 136 SLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 136 ~~~~~~~~~Gvdg~~~D~~e 155 (325)
+.++.+++.|||||-+|...
T Consensus 183 ~~~~~W~~~gvDGfRlDa~~ 202 (558)
T 1uok_A 183 EMMKFWLEKGIDGFRMDVIN 202 (558)
T ss_dssp HHHHHHHHTTCCEEEETTGG
T ss_pred HHHHHHHHcCCCEEEEcccc
Confidence 99999889999999999763
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0035 Score=60.18 Aligned_cols=136 Identities=22% Similarity=0.336 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccC----------C--Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEe
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYM----------D--GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIW 78 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----------~--~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~ 78 (325)
.+-..|.+-++.+++.|| ++|||-+-+. . ++ .+ +..|+ +|-. +++||+.+|++|+|+++
T Consensus 40 G~~~gi~~~LdyL~~LGv--~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~-~~Gt~~df~~lv~~~H~~Gi~Vil 116 (484)
T 2aaa_A 40 GSWQGIIDHLDYIEGMGF--TAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNS-NFGTADNLKSLSDALHARGMYLMV 116 (484)
T ss_dssp CCHHHHHHTHHHHHTTTC--CEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHHHHHhcCC--CEEEeCccccCcccccccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEE
Confidence 356777777888887776 7788754331 1 11 12 35554 5654 69999999999999999
Q ss_pred eeCC-ccccCCC-----ccccccccccceeee-----cCCCCceeeeecCCC----ccCCCCCChHHHHHHHHHHHhhhh
Q 020492 79 MLDP-GIKHEDG-----YFVYDSGSKIDVWIQ-----KADGTPFIGEVWPGP----CVFPDYTQSKVRSWWGSLVKDFIY 143 (325)
Q Consensus 79 ~~~P-~i~~~~~-----~~~~~~~~~~~~~~~-----~~~g~~~~~~~w~g~----~~~~Df~~p~a~~w~~~~~~~~~~ 143 (325)
-+.+ ++..+.. +..+.......++-. +-++.+-...+|.|. ..-+|+.||++++...+.++.+++
T Consensus 117 D~V~NH~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~dln~~np~v~~~l~~~~~~w~~ 196 (484)
T 2aaa_A 117 DVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVS 196 (484)
T ss_dssp EECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHHHHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHH
T ss_pred EECcCCcCCCCCCCcccccccccCCcccccCCCCCcccCCCCccccccccccCccccCccccCCHHHHHHHHHHHHHHHH
Confidence 7765 3333211 111111001111110 000000001234322 234789999999999999988876
Q ss_pred -CCccEEEecCCC
Q 020492 144 -NGVDGIWNDMNE 155 (325)
Q Consensus 144 -~Gvdg~~~D~~e 155 (325)
.|||||-+|...
T Consensus 197 ~~gvDGfR~D~~~ 209 (484)
T 2aaa_A 197 NYSVDGLRIDSVL 209 (484)
T ss_dssp HHTCCEEEESCST
T ss_pred hcCCCEEEecccc
Confidence 699999999864
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0023 Score=63.14 Aligned_cols=133 Identities=21% Similarity=0.244 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +..|+ +|-. +++||+.+|++|+|+++-+.| +++
T Consensus 38 dl~gi~~~Ldyl~~LGv--~~i~l~Pi~~~~~~~~GY~~~dy~~id~-~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~ 114 (589)
T 3aj7_A 38 DMKGIASKLEYIKELGA--DAIWISPFYDSPQDDMGYDIANYEKVWP-TYGTNEDCFALIEKTHKLGMKFITDLVINHCS 114 (589)
T ss_dssp CHHHHHHTHHHHHHHTC--SEEEECCCEECCCTTTTSSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCcCccccccccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 55677777888888886 78887643321 1 123 35554 5654 689999999999999997665 332
Q ss_pred cCCCccccccc------cccceeeec-CC-----C---------CceeeeecC--------------CCccCCCCCChHH
Q 020492 86 HEDGYFVYDSG------SKIDVWIQK-AD-----G---------TPFIGEVWP--------------GPCVFPDYTQSKV 130 (325)
Q Consensus 86 ~~~~~~~~~~~------~~~~~~~~~-~~-----g---------~~~~~~~w~--------------g~~~~~Df~~p~a 130 (325)
.+.. -|.++ .-.++++.. .. | ..+-+..|. ....-+|+.||++
T Consensus 115 ~~~~--wf~~~~~~~~~~y~d~y~~~~~~~~~~~g~~~~p~~~~~~f~g~~w~~~~~~~~~y~~~f~~~~pdLN~~np~V 192 (589)
T 3aj7_A 115 SEHE--WFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDC 192 (589)
T ss_dssp TTSH--HHHHHTTCSSSTTGGGBCEECCSEECTTSCEECSSCBBCTTSSBSEEEETTTTEEEECSSSTTCCBBCTTCHHH
T ss_pred cchh--HHHHHhcCCCCCCCCceeecCCcccccccCCCCCCcccccCCCccceecCCCCeEEECccCCCCCccCCCCHHH
Confidence 2211 11111 112333321 10 0 000011110 1123468999999
Q ss_pred HHHHHH-HHHhhhhCCccEEEecCCC
Q 020492 131 RSWWGS-LVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 131 ~~w~~~-~~~~~~~~Gvdg~~~D~~e 155 (325)
++...+ .++..++.|||||-+|...
T Consensus 193 r~~l~~~~~~~Wl~~gvDGfRlDa~~ 218 (589)
T 3aj7_A 193 RKAIYESAVGYWLDHGVDGFRIDVGS 218 (589)
T ss_dssp HHHHHHHHTHHHHHTTCCEEEETTGG
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcccc
Confidence 999998 8888888999999999864
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0035 Score=58.81 Aligned_cols=134 Identities=17% Similarity=0.213 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..|.+.++.+++.|+ ++|+|-+-+.. ++ .+ +..|+.+|-. +++|++.+|++|+|+++-+.| ++..
T Consensus 19 ~~~gi~~~ldyl~~lGv--~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 96 (405)
T 1ht6_A 19 WYNMMMGKVDDIAAAGV--THVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHRCA 96 (405)
T ss_dssp HHHHHHTTHHHHHHTTC--CEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcccC
Confidence 34667777888888876 88988654321 11 12 4455246654 689999999999999997765 3332
Q ss_pred CCC-----ccccccccc---ccee---eecCCCCcee---e--eecCC--CccCCCCCChHHHHHHHHHHHhhhh-CCcc
Q 020492 87 EDG-----YFVYDSGSK---IDVW---IQKADGTPFI---G--EVWPG--PCVFPDYTQSKVRSWWGSLVKDFIY-NGVD 147 (325)
Q Consensus 87 ~~~-----~~~~~~~~~---~~~~---~~~~~g~~~~---~--~~w~g--~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvd 147 (325)
+.. +..|..... .++. +...+ ..+. + ..+.+ ...-+|+.||++++...+.++.+++ .|||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~i~~~~~~w~~~~gvD 175 (405)
T 1ht6_A 97 DYKDSRGIYCIFEGGTSDGRLDWGPHMICRDD-TKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFD 175 (405)
T ss_dssp SEECTTSCEEECCCSSSSSTTCCCGGGBCTTC-TTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCCcccCCCCCcCCCCCCCCccccCCC-CCcCCCCCcccCCCCcCcCCccCcCCHHHHHHHHHHHHHHHhccCCC
Confidence 211 222221110 0110 00000 0000 0 00111 1234679999999999999988887 8999
Q ss_pred EEEecCC
Q 020492 148 GIWNDMN 154 (325)
Q Consensus 148 g~~~D~~ 154 (325)
||-+|..
T Consensus 176 GfR~D~~ 182 (405)
T 1ht6_A 176 AWRLDFA 182 (405)
T ss_dssp EEEETTG
T ss_pred EEEEecc
Confidence 9999975
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0045 Score=60.94 Aligned_cols=132 Identities=16% Similarity=0.148 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..|.+-++.++++|| ++|+|-+=+.. + ..+ +..|+ +|.. +++||+.+|++|+++++-+.| ++..
T Consensus 171 ~~~gi~~~LdyLk~LGv--t~I~L~Pi~~~~~~~GYd~~dy~~id~-~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~ 247 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGV--TALYFTPIFASPSHHKYDTADYLAIDP-QFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGD 247 (585)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHhHHHHHcCC--CEEEECCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCC
Confidence 55677777888888887 77887643211 1 122 45554 6664 689999999999999997665 3332
Q ss_pred CCCccccccc-------cccceeeecCCC---Cc-eeeeecC-CC--ccCCCCCChHHHHHHHHHHHhhhhCCccEEEec
Q 020492 87 EDGYFVYDSG-------SKIDVWIQKADG---TP-FIGEVWP-GP--CVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWND 152 (325)
Q Consensus 87 ~~~~~~~~~~-------~~~~~~~~~~~g---~~-~~~~~w~-g~--~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D 152 (325)
+. ..|+++ .-.+++..+... .+ .....|. +. ..-+|+.||++++...+.++.+++.|||||-+|
T Consensus 248 ~~--~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl~~gvDGfR~D 325 (585)
T 1wzl_A 248 QF--FAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRLD 325 (585)
T ss_dssp TS--HHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEET
T ss_pred cc--HHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 22 112111 112333322100 00 0111222 22 234789999999999999998779999999999
Q ss_pred CC
Q 020492 153 MN 154 (325)
Q Consensus 153 ~~ 154 (325)
..
T Consensus 326 ~a 327 (585)
T 1wzl_A 326 VA 327 (585)
T ss_dssp TG
T ss_pred cc
Confidence 64
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0036 Score=61.23 Aligned_cols=134 Identities=24% Similarity=0.334 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC-----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD-----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
.+-..|.+.++.+++.|| ++|||-+-+.. ++ .+ +..|+ +|-. +++|++.+|++|+|+++-+.| ++
T Consensus 28 Gd~~gi~~~ldyl~~lGv--~~i~l~Pi~~~~~~~~gY~~~dy~~id~-~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~ 104 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGV--DIVWICPIYRSPNADNGYDISDYYAIMD-EFGTMDDFDELLAQAHRRGLKVILDLVINHT 104 (555)
T ss_dssp CCHHHHHHTHHHHHHHTC--CEEEECCCEECCCTTTTCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEEECSBC
T ss_pred CCHHHHHHHHHHHHHcCC--CEEEeCCcccCCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 356777788888888886 78888654322 11 23 34553 5554 689999999999999987655 33
Q ss_pred ccCCCccccccc------cccceeeecC--CCCc-------eeeeecC--------------CCccCCCCCChHHHHHHH
Q 020492 85 KHEDGYFVYDSG------SKIDVWIQKA--DGTP-------FIGEVWP--------------GPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 85 ~~~~~~~~~~~~------~~~~~~~~~~--~g~~-------~~~~~w~--------------g~~~~~Df~~p~a~~w~~ 135 (325)
+.+.. -+.++ ...++++-.. +|.+ +-+..|. ....-+|+.||++++...
T Consensus 105 ~~~~~--~f~~~~~~~~~~~~~~y~~~~~~~g~~p~~~~~~f~~~~w~~~~~~~~~~~~~f~~~~pdLn~~np~V~~~l~ 182 (555)
T 2ze0_A 105 SDEHP--WFIESRSSRDNPKRDWYIWRDGKDGREPNNWESIFGGSAWQYDERTGQYYLHIFDVKQPDLNWENSEVRQALY 182 (555)
T ss_dssp CTTSH--HHHHHHHCSSSTTGGGBCEECCBTTBCSSCEECTTSSBSEEEETTTTEEEECSSCTTCCBBCTTCHHHHHHHH
T ss_pred cchhh--HHHHhhcCCCCCccccccccCCCCCCCCCcccccCCCccceecCCCCceeecccCccCCccCCCCHHHHHHHH
Confidence 22211 11110 1123333211 2211 0001110 112236889999999999
Q ss_pred HHHHhhhhCCccEEEecCCC
Q 020492 136 SLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 136 ~~~~~~~~~Gvdg~~~D~~e 155 (325)
+.++.+++.|||||-+|...
T Consensus 183 ~~~~~W~~~gvDGfRlDa~~ 202 (555)
T 2ze0_A 183 EMVNWWLDKGIDGFRIDAIS 202 (555)
T ss_dssp HHHHHHHHHTCCEEEEESGG
T ss_pred HHHHHHHHcCCCEEEEcccc
Confidence 99998888999999999763
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0036 Score=63.03 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=76.3
Q ss_pred CHHHHHHHH-HHHHhcCCCceEEEEecccCC------Cc---eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCCcc
Q 020492 18 SDKRVREIC-RTFREKGIPCDVIWMDIDYMD------GF---RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDPGI 84 (325)
Q Consensus 18 ~~~~v~~~~-~~~~~~~iP~d~i~iD~~w~~------~~---~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P~i 84 (325)
+-..+.+.+ +.+++.|| ++|++-+-... ++ .-|..+ .+|-. ++.||+.+|++|+++++.+.|.=
T Consensus 261 ~~~~l~~~l~~yLk~lG~--t~I~L~Pi~e~~~~~~wGY~~~~y~a~~-~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH 337 (722)
T 3k1d_A 261 SYRQLARELTDYIVDQGF--THVELLPVAEHPFAGSWGYQVTSYYAPT-SRFGTPDDFRALVDALHQAGIGVIVDWVPAH 337 (722)
T ss_dssp CHHHHHHHHHHHHHHHTC--SEEEESCCEECSCGGGTTCSCSEEEEEC-GGGCCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CHHHHHHHHHHHHHHcCC--CeEEECCcccCCCCCCCCCCcccCcCcc-ccCCCHHHHHHHHHHHHHcCCEEEEEEEeec
Confidence 445555544 88888887 66775432211 11 123444 35654 58999999999999999887633
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
.......... .+...+....+........|.. ..+|+.+|+++++..+.++.+++ .|||||-+|..
T Consensus 338 ~~~~~~~~~~--fdg~~~y~~~d~~~~~~~~Wg~--~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDGfR~Dav 404 (722)
T 3k1d_A 338 FPKDAWALGR--FDGTPLYEHSDPKRGEQLDWGT--YVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAV 404 (722)
T ss_dssp CCCCTTTTTT--TTSSCCSBCCCCCSSSTTCCCC--CCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred cCCccchhhc--CCCCcccccCCcccCccCCCCC--eeecCCCHHHHHHHHHHHHHHHHHhCCCEEEEcch
Confidence 2222111100 0100111111111001123422 35799999999999999998887 79999999974
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0033 Score=62.37 Aligned_cols=126 Identities=16% Similarity=0.248 Sum_probs=75.6
Q ss_pred CHHHHHHH-HHHHHhcCCCceEEEEecccCC------Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREI-CRTFREKGIPCDVIWMDIDYMD------GF--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~-~~~~~~~~iP~d~i~iD~~w~~------~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..|.+. ++.+++.|| ++|+|-+-+.. ++ .+ |..++ +|- ++++||+.+|++|+++++.+.| +
T Consensus 153 ~~~~i~~~ll~yl~~lGv--~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~-~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH 229 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGF--THLELLPINEHPFDGSWGYQPTGLYAPTR-RFGTRDDFRYFIDAAHAAGLNVILDWVPGH 229 (617)
T ss_dssp CHHHHHHHHHHHHHHTTC--SEEEESCCEECSCGGGTTSSCSEEEEECG-GGSCHHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEecccccCCCCCCCCcccccCCccCc-cCCCHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 55566555 488888886 77887543221 11 12 34443 444 4689999999999999998776 3
Q ss_pred cccCC-Cccccccccccceee-ecC-CCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 84 IKHED-GYFVYDSGSKIDVWI-QKA-DGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 84 i~~~~-~~~~~~~~~~~~~~~-~~~-~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+..++ ....++ ...++. .++ +|. ...|. ...+|+.||++++...+.++..++ .|||||-+|.-
T Consensus 230 ~~~~~~~~~~~d---~~~~y~~~~~~~g~---~~~w~--~~~ln~~~p~v~~~i~~~~~~W~~~~gvDGfR~D~~ 296 (617)
T 1m7x_A 230 FPTDDFALAEFD---GTNLYEHSDPREGY---HQDWN--TLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAV 296 (617)
T ss_dssp CCCSTTSSTTGG---GSCSSBCC----------------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCS
T ss_pred ccCccchhhhcC---CCccccccCcccCC---cCCCC--CceecCCCHHHHHHHHHHHHHHHHHhCcCEEEEcch
Confidence 32222 111111 011221 111 111 11242 345899999999999999998887 69999999974
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0037 Score=62.13 Aligned_cols=133 Identities=17% Similarity=0.119 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-------Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-------GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..|.+.++.+++.|| ++|||-+-+.. ++ .+ +.+|+ +|-. +++|++.+|++|+|+++-+.+ +
T Consensus 111 dl~gi~~~LdyL~~LGv--~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp-~~Gt~~d~~~Lv~~ah~~GI~VilD~V~NH 187 (628)
T 1g5a_A 111 DLKGLKDKIPYFQELGL--TYLHLMPLFKCPEGKSDGGYAVSSYRDVNP-ALGTIGDLREVIAALHEAGISAVVDFIFNH 187 (628)
T ss_dssp SHHHHHTTHHHHHHHTC--SEEEECCCBCCCSSCSTTTTSCSCSSSBCT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCCCCCCCCCCCCCcCCcccCCcCc-cCCCHHHHHHHHHHHHHCCCEEEEEEecCc
Confidence 45667777888888886 88988654432 11 12 24443 4554 689999999999999987665 3
Q ss_pred cccCCCcccccc-----ccccceeeecCCCC-------------------cee----ee-ecC---CCccCCCCCChHHH
Q 020492 84 IKHEDGYFVYDS-----GSKIDVWIQKADGT-------------------PFI----GE-VWP---GPCVFPDYTQSKVR 131 (325)
Q Consensus 84 i~~~~~~~~~~~-----~~~~~~~~~~~~g~-------------------~~~----~~-~w~---g~~~~~Df~~p~a~ 131 (325)
++.+.. -+.+ ..-.++|+..+++. .+. +. .|. ....-+|+.||+++
T Consensus 188 ~s~~~~--wf~~~~~g~~~y~d~y~~~~~~~~P~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~V~ 265 (628)
T 1g5a_A 188 TSNEHE--WAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVF 265 (628)
T ss_dssp EETTSH--HHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEECSSSTTEEEBCTTSHHHH
T ss_pred ccccch--hHHHHhcCCCccccccccCCCCCCcccccccccccCCCCCCCccccCCCCCEEeccCCCCCCccCCCCHHHH
Confidence 332221 1110 01123333221110 000 00 011 01123789999999
Q ss_pred HHHHHHHHhhhhCCccEEEecCCC
Q 020492 132 SWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 132 ~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
+...+.++.+++.|||||-+|...
T Consensus 266 ~~i~~~l~~w~~~GvDGfRlDa~~ 289 (628)
T 1g5a_A 266 RAMAGEMLFLANLGVDILRMDAVA 289 (628)
T ss_dssp HHHHHHHHHHHTTTCSEEEETTGG
T ss_pred HHHHHHHHHHHHcCCCEEEEeccc
Confidence 999999998889999999999753
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.012 Score=57.97 Aligned_cols=130 Identities=14% Similarity=0.115 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..|.+-++.++++|| ++|+|-+=+.. ++ .+ +..|+ +|.. +++||+.+|++|+|+++-+.| ++..
T Consensus 174 ~~~gi~~~LdyLk~LGv--t~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 250 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGI--TGIYLTPIFRSPSNHKYDTADYFEVDP-HFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGY 250 (588)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCcCccccCccCc-cCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcc
Confidence 56777777888888886 77887643211 11 22 45554 6665 689999999999999997765 3332
Q ss_pred CCCcccccc-------ccccceeeecCCC---C---ceeeeecCC--CccCCCCCChHHHHHHHHHHHhhh-hCCccEEE
Q 020492 87 EDGYFVYDS-------GSKIDVWIQKADG---T---PFIGEVWPG--PCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIW 150 (325)
Q Consensus 87 ~~~~~~~~~-------~~~~~~~~~~~~g---~---~~~~~~w~g--~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~ 150 (325)
+. ..+.+ ..-.+++..+... . .|. .|.+ ...-+|+.||++++...+.++..+ +.|||||-
T Consensus 251 ~~--~~f~~~~~~g~~s~y~dwy~~~~~~~~~~~~~~y~--~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giDGfR 326 (588)
T 1j0h_A 251 EF--APFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYD--TFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWR 326 (588)
T ss_dssp TC--HHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBC--BSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred cc--hhHHHHHhcCCCCCcccccccccCCCCCCCCCCeE--EecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 21 11111 0112223222110 0 111 1111 123468999999999999999888 58999999
Q ss_pred ecCC
Q 020492 151 NDMN 154 (325)
Q Consensus 151 ~D~~ 154 (325)
+|..
T Consensus 327 ~D~a 330 (588)
T 1j0h_A 327 LDVA 330 (588)
T ss_dssp ETTG
T ss_pred Eecc
Confidence 9964
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0064 Score=59.82 Aligned_cols=132 Identities=13% Similarity=0.091 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..|.+-++.++++|| ++|+|-+-+.. ++ .+ +..|+ +|.. +++||+.+|++|+|+++-+.| ++..
T Consensus 170 d~~gi~~~LdyLk~LGv--t~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 246 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGV--NAVYFTPLFKATTNHKYDTEDYFQIDP-QFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGR 246 (583)
T ss_dssp CHHHHHHTHHHHHHHTC--SEEEECCCSSCSSSSTTSCSCTTCCCT-TTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCT
T ss_pred CHHHHHHhhHHHHHcCC--CEEEECCCccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEccccCCC
Confidence 55677777888888886 78888754321 11 12 34443 5554 689999999999999997665 3332
Q ss_pred CCCcccccccc-------ccceeeecC-----CCCceeeeecCCCc--cCCCCCChHHHHHHHHHHHhhh-hCCccEEEe
Q 020492 87 EDGYFVYDSGS-------KIDVWIQKA-----DGTPFIGEVWPGPC--VFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWN 151 (325)
Q Consensus 87 ~~~~~~~~~~~-------~~~~~~~~~-----~g~~~~~~~w~g~~--~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~ 151 (325)
+. ..|+++. -.+++..+. ++.......|.+.. .-+|+.||++++...+.++.++ +.|||||-+
T Consensus 247 ~~--~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR~ 324 (583)
T 1ea9_C 247 TF--PPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRL 324 (583)
T ss_dssp TT--HHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred cc--HHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCceEEEe
Confidence 22 1122111 122332221 11100111222221 2468899999999999999888 689999999
Q ss_pred cCC
Q 020492 152 DMN 154 (325)
Q Consensus 152 D~~ 154 (325)
|..
T Consensus 325 D~~ 327 (583)
T 1ea9_C 325 DVA 327 (583)
T ss_dssp TTC
T ss_pred ccc
Confidence 974
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0046 Score=62.40 Aligned_cols=92 Identities=13% Similarity=0.194 Sum_probs=59.3
Q ss_pred ChHHHHHHHHHCCCEEEeeeCCc-cccCCCc---cccccccccceeeecCCCC-ceeeeecCCCccCCCCCChHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDPG-IKHEDGY---FVYDSGSKIDVWIQKADGT-PFIGEVWPGPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P~-i~~~~~~---~~~~~~~~~~~~~~~~~g~-~~~~~~w~g~~~~~Df~~p~a~~w~~ 135 (325)
++++||+.+|++|++|++-+.+. +...... ..++......++..++++. .|. .+.+...-+|+.||++++...
T Consensus 268 dfk~lv~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~--~~~~~~~~ln~~~p~v~~~i~ 345 (718)
T 2vr5_A 268 SFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYL--DFTGTGNTLNLSHPRVIQMVL 345 (718)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBC--CSSSSSCCBCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeccCcccCccccCccccccCCCCCcceEeCCCCCceee--cCCCccCeecCCCHHHHHHHH
Confidence 47899999999999999977652 3322110 0111111233444333332 121 122333458999999999999
Q ss_pred HHHHhhhh-CCccEEEecCC
Q 020492 136 SLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 136 ~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+.++.+++ .|||||-+|..
T Consensus 346 d~l~~W~~e~gvDGfR~D~~ 365 (718)
T 2vr5_A 346 DSLRYWVTEMHVDGFRFDLA 365 (718)
T ss_dssp HHHHHHHHTTCCCEEEETTG
T ss_pred HHHHHHHHHcCCCEEEEcch
Confidence 99998886 89999999975
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0047 Score=61.03 Aligned_cols=123 Identities=15% Similarity=0.184 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------Cc---eeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------GF---RCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------~~---~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
+-..|.+.++.+++.|| ++|+|-+-+.. ++ ..|..++ +|- ++++||+.+|++|+++++-+.+ ++
T Consensus 142 ~~~gi~~~L~yl~~lGv--~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~-~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~ 218 (602)
T 2bhu_A 142 TYRAAAEKLPYLKELGV--TAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PYGRPEDLMALVDAAHRLGLGVFLDVVYNHF 218 (602)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEECCCEECSSSCCCSTTCCEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECChhhccCCCCCCcccccCcccCc-CCCCHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 55677777888888887 77887643321 11 1234443 444 4689999999999999998765 34
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e 155 (325)
..+..+. .. -..++|.... ...| ...+|+.+|++++...+.++.++ +.|||||-+|...
T Consensus 219 ~~~~~~~--~~-~~~~~~~~~~------~~~w---~~~ln~~~~~v~~~i~~~~~~W~~~~gvDGfR~D~~~ 278 (602)
T 2bhu_A 219 GPSGNYL--SS-YAPSYFTDRF------SSAW---GMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATP 278 (602)
T ss_dssp CSSSCCH--HH-HCGGGEEEEE------ECSS---SEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGG
T ss_pred ccCCccc--cc-cCcccccCCC------CCCC---CCCccCCCHHHHHHHHHHHHHHHHHhCCCEEEEechH
Confidence 3333211 10 1123443210 1112 12379999999999999888888 4899999999853
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0024 Score=63.77 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=80.2
Q ss_pred CHHHHHHH--HHHHHhcCCCceEEEEecccCC---------------Cc--ee-eeecCCCCC--------ChHHHHHHH
Q 020492 18 SDKRVREI--CRTFREKGIPCDVIWMDIDYMD---------------GF--RC-FTFDKERFP--------DPKSLAADL 69 (325)
Q Consensus 18 ~~~~v~~~--~~~~~~~~iP~d~i~iD~~w~~---------------~~--~~-f~~d~~~FP--------d~~~~~~~L 69 (325)
+-..|.+- ++.+++.|| ++|+|-+-+.. ++ .+ |..++ +|- ++++||+.+
T Consensus 175 ~~~gi~~~~~l~yL~~LGv--t~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~-~~G~~p~~~~~d~~~lv~~~ 251 (657)
T 2wsk_A 175 TYKALGHPVMINYLKQLGI--TALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHP-AYACSPETALDEFRDAIKAL 251 (657)
T ss_dssp SHHHHTSHHHHHHHHHHTC--CEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECG-GGCSSGGGHHHHHHHHHHHH
T ss_pred CHHHHhcccchHHHHHcCC--CEEEECCccccCccccccccccccccCcCcccCCCCCH-HHcCCCCcCHHHHHHHHHHH
Confidence 34455554 788888886 66765421110 11 12 35554 453 479999999
Q ss_pred HHCCCEEEeeeCC-ccccCCCcc---ccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-C
Q 020492 70 HLNGFKAIWMLDP-GIKHEDGYF---VYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-N 144 (325)
Q Consensus 70 ~~~G~k~~~~~~P-~i~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~ 144 (325)
|++|+++++-+.+ ++..+.... .++......+|..+++|. +. .+.+...-+|+.||++++...+.++.+++ .
T Consensus 252 H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~--~~~~~~~~ln~~~p~v~~~i~d~~~~W~~e~ 328 (657)
T 2wsk_A 252 HKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGD-YH--NWTGCGNTLNLSHPAVVDYASACLRYWVETC 328 (657)
T ss_dssp HHTTCEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSS-BC--CSSSSSCCBCTTSHHHHHHHHHHHHHHHHTT
T ss_pred HHCCCEEEEEEeecccccccccCccccccCCCCccceEECCCCC-ee--CCCCcCCcccCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999997765 333222110 111111123443344332 22 12233345899999999999999998887 8
Q ss_pred CccEEEecCC
Q 020492 145 GVDGIWNDMN 154 (325)
Q Consensus 145 Gvdg~~~D~~ 154 (325)
|||||-+|..
T Consensus 329 gvDGfR~D~~ 338 (657)
T 2wsk_A 329 HVDGFRFDLA 338 (657)
T ss_dssp CCCEEEETTT
T ss_pred CCcEEEEecc
Confidence 9999999975
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.011 Score=59.40 Aligned_cols=133 Identities=11% Similarity=0.107 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..|.+-++.++++|| ++|||-+-+.. + ..+ +.+|+ +|-. +++|++++|++|+|+++-+.+ +++.
T Consensus 263 dl~Gi~~kLdyLk~LGv--t~IwL~Pi~~s~~~~GYd~~Dy~~idp-~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~ 339 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGV--ETIYLTPIFSSTSYHRYDTIDYKSIDK-YLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNP 339 (696)
T ss_dssp CHHHHHTTHHHHHHHTC--CEEEECCCEEESSSSCCSEEEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECSSEECT
T ss_pred CHHHHHHHhHHHHHcCC--CEEEECCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEeccccccCc
Confidence 56778888888888886 78888653321 1 123 34554 5654 689999999999999997665 2332
Q ss_pred CCCcccccc-------ccccceeeecCCCC--------------ce----------------eeeecCC--CccCCCCCC
Q 020492 87 EDGYFVYDS-------GSKIDVWIQKADGT--------------PF----------------IGEVWPG--PCVFPDYTQ 127 (325)
Q Consensus 87 ~~~~~~~~~-------~~~~~~~~~~~~g~--------------~~----------------~~~~w~g--~~~~~Df~~ 127 (325)
+. ..|.+ ..-.++|....... +. .-..|.+ ...-+|+.|
T Consensus 340 ~~--~~f~~~~~~~~~s~y~dwy~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~y~~~~~~~~~pdLN~~n 417 (696)
T 4aee_A 340 CN--ELFVKALREGENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDN 417 (696)
T ss_dssp TS--HHHHHHHHHCTTSTTGGGBCBCSCCCHHHHHHHHHHHSSSSCCGGGGGGSHHHHHSCCSBCBGGGCTTCEEBCTTC
T ss_pred cC--HHHHHHHhcCCCCCCCCceEecCCCCcccccccccccCCCccccccccccccccCCCCceeeecCCCCchhhcCCC
Confidence 21 11111 11123333221100 00 0001111 122368999
Q ss_pred hHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 128 SKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 128 p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
|++++...+.++.+++.|||||-+|...
T Consensus 418 p~Vr~~i~~~~~~Wl~~GvDGfRlDaa~ 445 (696)
T 4aee_A 418 PRTVDYFIDITKFWIDKGIDGFRIDVAM 445 (696)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEETTGG
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 9999999999998889999999999753
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=96.63 E-value=0.011 Score=56.33 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=29.6
Q ss_pred CCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 123 PDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 123 ~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
+|+.||++++...+.++.+++.|||||-+|...
T Consensus 168 ln~~n~~V~~~l~~~~~~~~~~gvDGfR~D~~k 200 (496)
T 4gqr_A 168 LALEKDYVRSKIAEYMNHLIDIGVAGFRLDASK 200 (496)
T ss_dssp BCTTSHHHHHHHHHHHHHHHHHTCCEEEETTGG
T ss_pred cccCCHHHHHHHHHHHHHHHhcCcceeeccccc
Confidence 688999999999999988888999999999763
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0058 Score=60.52 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC----C--Cc---eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCCc-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM----D--GF---RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDPG-I 84 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~--~~---~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P~-i 84 (325)
+-..+.+.++.+++.|| ++|++-+-.. . ++ .-|..++ +|-. ++.||+.+|++|+++++-+.+. +
T Consensus 152 ~~~~~~~~L~yl~~lGv--~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~-~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~ 228 (618)
T 3m07_A 152 TFRAAIAKLPYLAELGV--TVIEVMPVAQFGGERGWGYDGVLLYAPHS-AYGTPDDFKAFIDAAHGYGLSVVLDIVLNHF 228 (618)
T ss_dssp SHHHHHTTHHHHHHHTC--CEEEECCCEECSSSCCCSTTCCEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCChhccCCCCCCCcCcccccccCc-CcCCHHHHHHHHHHHHHCCCEEEEeecCccC
Confidence 55677788888888886 6677643211 1 11 2234543 5654 6899999999999999987763 4
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMNE 155 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~e 155 (325)
..+..+. .. -...++..+. ...| |. .+|+.+|++++...+.++.++ +.|||||-+|...
T Consensus 229 ~~~~~~~--~~-~~~~~~~~~~------~~~w-g~--~ln~~~p~V~~~i~~~~~~w~~~~gvDGfR~D~~~ 288 (618)
T 3m07_A 229 GPEGNYL--PL-LAPAFFHKER------MTPW-GN--GIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAID 288 (618)
T ss_dssp CSSSCCH--HH-HCGGGEEEEE------EETT-EE--EECTTSHHHHHHHHHHHHHHHHHTTCSEEEETTGG
T ss_pred CCCcccc--cc-cCchhhcCCC------CCCC-CC--CcCCCCHHHHHHHHHHHHHHHHHhCccEEEecchh
Confidence 4333211 10 1223332211 1112 22 379999999999999999888 6999999999863
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0074 Score=57.32 Aligned_cols=134 Identities=10% Similarity=0.024 Sum_probs=76.3
Q ss_pred HHHHHH-HHHHHHhcCCCceEEEEecccCC--------Cc--eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 19 DKRVRE-ICRTFREKGIPCDVIWMDIDYMD--------GF--RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 19 ~~~v~~-~~~~~~~~~iP~d~i~iD~~w~~--------~~--~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
-..|.+ .++.++++|| ++|||-+-+.. ++ .+|..|+ +|.. +++||+++|++|+|+++-+.+ +
T Consensus 13 ~~gi~~~lldyL~~LGv--~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp-~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH 89 (448)
T 1g94_A 13 WQDVAQECEQYLGPKGY--AAVQVSPPNEHITGSQWWTRYQPVSYELQS-RGGNRAQFIDMVNRCSAAGVDIYVDTLINH 89 (448)
T ss_dssp HHHHHHHHHHTHHHHTC--CEEEECCCSCBBCSSSGGGGGSBSCSCSCB-TTBCHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHcCC--CEEEECCccccCCCCCCcccccccccccCC-CCCCHHHHHHHHHHHHHCCCEEEEEEeecc
Confidence 344554 3577778886 88888653321 11 1256654 5654 689999999999999986544 2
Q ss_pred cccCCC----ccccccc----cccceeeec--CCCCcee------eeecCCCccCCCCCChHHHHHHHHHHHhhhhCCcc
Q 020492 84 IKHEDG----YFVYDSG----SKIDVWIQK--ADGTPFI------GEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVD 147 (325)
Q Consensus 84 i~~~~~----~~~~~~~----~~~~~~~~~--~~g~~~~------~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvd 147 (325)
+..+.. -..|... -....|-.. ..|..+. ..+|-....-+|+.||++++...+.++.+++.|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dln~~np~Vr~~i~~~~~~w~~~gvD 169 (448)
T 1g94_A 90 MAAGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQAIGVK 169 (448)
T ss_dssp ECSSCEEBTTSCEEBTTBCSSCCGGGBCCCCBCCTTHHHHCHHHHHHSBSTTCEEBCTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCCCCCCCCCccccCCCCCHHHcCCCCCcCccccCCcccccceeeccCCCCcCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 222210 0011100 000112110 0010110 00111112236889999999999999988889999
Q ss_pred EEEecCCC
Q 020492 148 GIWNDMNE 155 (325)
Q Consensus 148 g~~~D~~e 155 (325)
||-+|...
T Consensus 170 GfR~D~~~ 177 (448)
T 1g94_A 170 GFRFDASK 177 (448)
T ss_dssp EEEEETGG
T ss_pred EEeecccc
Confidence 99999863
|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0063 Score=59.97 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCC-ceee-eecCCCCCChHHHHHHHHHCCCEEEeeeC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDG-FRCF-TFDKERFPDPKSLAADLHLNGFKAIWMLD 81 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-~~~f-~~d~~~FPd~~~~~~~L~~~G~k~~~~~~ 81 (325)
|.+.+++.|+-..++|+ +.+.+|.+|... .++| +.+++ .|++++++..|++|+++++|.+
T Consensus 307 n~~~~k~yIDfAa~~G~--~yvlvD~gW~~~~~~d~~~~~p~--~di~~l~~Ya~~kgV~i~lw~~ 368 (641)
T 3a24_A 307 NNPTYKAYIDFASANGI--EYVILDEGWAVNLQADLMQVVKE--IDLKELVDYAASKNVGIILWAG 368 (641)
T ss_dssp SHHHHHHHHHHHHHTTC--CEEEECTTSBCTTSCCTTCBCTT--CCHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEecccccCCCCCccccCCc--CCHHHHHHHHHhcCCEEEEEee
Confidence 67889999999999997 668889999753 2333 22222 4689999999999999999965
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.012 Score=58.46 Aligned_cols=131 Identities=15% Similarity=0.176 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHHh-cCCCceEEEEecccCC----Cc--ee-eeecCCCCCC---hHHHHHHHHHCC--C--EEEeeeCC
Q 020492 18 SDKRVREICRTFRE-KGIPCDVIWMDIDYMD----GF--RC-FTFDKERFPD---PKSLAADLHLNG--F--KAIWMLDP 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~-~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G--~--k~~~~~~P 82 (325)
+-..|.+-++.+++ +|| ++|+|-+=... ++ .+ |..|+ +|.. +++||+.+|++| + +|++-+.+
T Consensus 189 ~~~gi~~~LdyLk~~LGv--t~I~L~Pi~~~~~~~GYd~~dy~~id~-~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~ 265 (637)
T 1ji1_A 189 DLAGIDQKLGYIKKTLGA--NILYLNPIFKAPTNHKYDTQDYMAVDP-AFGDNSTLQTLINDIHSTANGPKGYLILDGVF 265 (637)
T ss_dssp CHHHHHHTHHHHHTTTCC--CEEEESCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHCSSSSSCCEEEEEECC
T ss_pred CHHHHHHhHHHHHhccCC--CEEEECCCccCCCCCCcCccchhhhcc-ccCCHHHHHHHHHHHHhCCCCccceEEEEECc
Confidence 56777777777777 775 78887642211 11 22 45554 5664 689999999999 9 99997655
Q ss_pred -ccccCCCccccccccc--------------cceeeecCCCCceeeeecCCCc--cCCCCCCh--HHHHHH----HHHHH
Q 020492 83 -GIKHEDGYFVYDSGSK--------------IDVWIQKADGTPFIGEVWPGPC--VFPDYTQS--KVRSWW----GSLVK 139 (325)
Q Consensus 83 -~i~~~~~~~~~~~~~~--------------~~~~~~~~~g~~~~~~~w~g~~--~~~Df~~p--~a~~w~----~~~~~ 139 (325)
++..+.. -|+.... .+++........+ ..|.|.. .-+|+.|| ++++.. .+.++
T Consensus 266 NH~~~~~~--~f~~~~~f~~~g~y~~~~~py~~~y~~~~~~~~~--~~~~g~~~~pdln~~~p~~~Vr~~i~~~~~~~~~ 341 (637)
T 1ji1_A 266 NHTGDSHP--WFDKYNNFSSQGAYESQSSPWYNYYTFYTWPDSY--ASFLGFNSLPKLNYGNSGSAVRGVIYNNSNSVAK 341 (637)
T ss_dssp SBCCTTST--TTCTTCCSSSCCTTTCTTCTTGGGBCEEETTTEE--CEETTEEEEEBBBCCSTTCHHHHHHTTSTTSHHH
T ss_pred ccCCCCcH--HHhhhhccCccccccCCCCccccccccCCCCCCc--ccccCCCCcccccccCChHHHHHHHHhhhHHHHH
Confidence 3333221 1221111 2333322211112 2233422 35799999 999999 88888
Q ss_pred hhhh--CCccEEEecCCC
Q 020492 140 DFIY--NGVDGIWNDMNE 155 (325)
Q Consensus 140 ~~~~--~Gvdg~~~D~~e 155 (325)
..++ .|||||-+|...
T Consensus 342 ~Wl~~~~gvDGfR~Da~~ 359 (637)
T 1ji1_A 342 TYLNPPYSVDGWRLDAAQ 359 (637)
T ss_dssp HHHSTTTCCCEEEETTGG
T ss_pred HHHhCcCCCCEEEEEchh
Confidence 8776 699999999753
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.011 Score=60.67 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=61.9
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceee-ecCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWI-QKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.+|++|++|++-+.+ +...+. .|. ....+||. .+.+|.++. .|.| .-+|+.+|.+++...+.+
T Consensus 371 efk~lV~~~H~~GI~VILDvV~NH~a~~~---~~~-~~~p~yy~~~~~dg~~~~--~~~g--~~ln~~~p~Vr~~i~d~l 442 (877)
T 3faw_A 371 ELKQLIHDIHKRGMGVILDVVYNHTAKTY---LFE-DIEPNYYHFMNEDGSPRE--SFGG--GRLGTTHAMSRRVLVDSI 442 (877)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCCSCTH---HHH-TTSTTTSBCBCTTSCBCE--ETTE--ECBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEEeeccccCcc---ccc-cCCCceeeeeCCCCCeec--cCCC--cccccCCHHHHHHHHHHH
Confidence 3789999999999999998776 333322 222 12345554 355665432 2332 348999999999999999
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+.+++ .|||||-+|..
T Consensus 443 ~~Wv~e~gVDGFRfD~a 459 (877)
T 3faw_A 443 KYLTSEFKVDGFRFDMM 459 (877)
T ss_dssp HHHHHHHCCCEEEETTG
T ss_pred HHHHHHcCCcEEEEecC
Confidence 98887 79999999975
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.004 Score=62.85 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceeee-cCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWIQ-KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.+|++|++|++-+.+ ++..+.. ..|+.. .++++.+ +++|.+..+ .+.| .-+|+.||++++...+.+
T Consensus 317 dfk~LV~~aH~~GI~VIlDvV~NHt~~~~~-~~f~~~-~p~y~~~~~~~g~~~n~-~~~g--~dln~~np~Vr~~i~d~~ 391 (718)
T 2e8y_A 317 ELKQMINTLHQHGLRVILDVVFNHVYKREN-SPFEKT-VPGYFFRHDECGKPSNG-TGVG--NDIASERRMARKFIADCV 391 (718)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCCSSGGG-SHHHHH-STTTSBCBCTTSSBCCT-TSSS--CCBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEecccccCccc-cccccc-CCCeEEecCCCCcccCC-CCcc--cccccCCHHHHHHHHHHH
Confidence 5789999999999999997665 3333221 123322 2344443 333432111 1112 237899999999999999
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+.+++ .|||||-+|..
T Consensus 392 ~~Wl~e~gVDGfR~D~~ 408 (718)
T 2e8y_A 392 VYWLEEYNVDGFRFDLL 408 (718)
T ss_dssp HHHHHHHCCCEEEETTG
T ss_pred HHHHHHhCCCEEEEecc
Confidence 98887 89999999975
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.026 Score=53.99 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=29.7
Q ss_pred CCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 122 FPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 122 ~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
-+|+.||++++...+.++.+++ .|||||-+|...
T Consensus 200 dLn~~np~V~~~l~~~~~~w~~~~gvDGfR~Da~~ 234 (480)
T 1ud2_A 200 NIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIK 234 (480)
T ss_dssp EECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGG
T ss_pred ccCCCCHHHHHHHHHHHHHHHHccCCCEEEEcchh
Confidence 3678899999999999998885 899999999863
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.034 Score=53.14 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=29.4
Q ss_pred CCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 123 PDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 123 ~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
+|+.||++++...+.++.+++ .|||||-+|...
T Consensus 201 ln~~np~V~~~l~~~~~~w~~~~gvDGfR~Da~~ 234 (483)
T 3bh4_A 201 VDYDHPDVVAETKKWGIWYANELSLDGFRIDAAK 234 (483)
T ss_dssp ECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGG
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEechh
Confidence 678999999999999998885 899999999863
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.05 Score=54.46 Aligned_cols=135 Identities=18% Similarity=0.231 Sum_probs=76.9
Q ss_pred CHHHHHHHHH--HHHhcCCCceEEEEecccC-------------C--Cc--ee-eeecCCCCCC---hHHHHHHHHHCCC
Q 020492 18 SDKRVREICR--TFREKGIPCDVIWMDIDYM-------------D--GF--RC-FTFDKERFPD---PKSLAADLHLNGF 74 (325)
Q Consensus 18 ~~~~v~~~~~--~~~~~~iP~d~i~iD~~w~-------------~--~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~ 74 (325)
+-..|.+-++ .++++|| ++|||-+-+. . ++ .+ +..|+ +|-. +++|++++|++|+
T Consensus 50 dl~gi~~kLd~~yLk~LGv--~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp-~~Gt~~df~~Lv~~aH~~GI 126 (680)
T 1cyg_A 50 DWQGIINKINDGYLTDMGV--TAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNP-FFGTLSDFQRLVDAAHAKGI 126 (680)
T ss_dssp CHHHHHHHHHTSTTTTTTC--CEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHhhcCHHHHHhCCC--CEEEeCccccCccccccccCCCCCCCCcCchhccccCc-ccCCHHHHHHHHHHHHHCCC
Confidence 5566677777 6666665 8888765321 1 11 12 44554 6664 6899999999999
Q ss_pred EEEeeeCC-ccccCCC-ccccccccc---cceeeecC--CC-Ccee---eeecCC----------CccCCCCCChHHHHH
Q 020492 75 KAIWMLDP-GIKHEDG-YFVYDSGSK---IDVWIQKA--DG-TPFI---GEVWPG----------PCVFPDYTQSKVRSW 133 (325)
Q Consensus 75 k~~~~~~P-~i~~~~~-~~~~~~~~~---~~~~~~~~--~g-~~~~---~~~w~g----------~~~~~Df~~p~a~~w 133 (325)
|+++-+-+ +...... .+.|.+... .+.++... +- ..+. +..|.. ...-+|+.||++++.
T Consensus 127 kVilD~V~NHts~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~~~~pDLn~~np~Vr~~ 206 (680)
T 1cyg_A 127 KVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRY 206 (680)
T ss_dssp EEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHSSBSTTEEEBCTTSHHHHHH
T ss_pred EEEEEeCCCCCCcccccCcchhhcCccccCcccccccCCCchhceecCCCCCcCCCccccccCcCCCCccccCCHHHHHH
Confidence 99987654 2322110 011110000 00011000 00 0000 001110 112368899999999
Q ss_pred HHHHHHhhhhCCccEEEecCCC
Q 020492 134 WGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 134 ~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
..+.++.+++.|||||-+|...
T Consensus 207 i~~~~~~Wl~~GVDGfRlDa~~ 228 (680)
T 1cyg_A 207 LKDAVKMWIDMGIDGIRMDAVK 228 (680)
T ss_dssp HHHHHHHHHTTTCCEEEESCGG
T ss_pred HHHHHHHHHhCCCCEEEEeccc
Confidence 9999999999999999999753
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.049 Score=55.16 Aligned_cols=129 Identities=15% Similarity=0.215 Sum_probs=79.9
Q ss_pred CHHHHHH-HHHHHHhcCCCceEEEEecccCC------Cc---eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVRE-ICRTFREKGIPCDVIWMDIDYMD------GF---RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~-~~~~~~~~~iP~d~i~iD~~w~~------~~---~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..+.+ .++.+++.|| ++|+|-+=+.. ++ .-|..++ +|-. ++.||+.+|++|++|++-+.| +
T Consensus 199 t~~~l~~~~L~yLk~LGv--t~I~L~Pi~e~~~~~~~GY~~~dy~a~~~-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 275 (755)
T 3aml_A 199 TYREFADNVLPRIRANNY--NTVQLMAIMEHSYYASFGYHVTNFFAVSS-RSGTPEDLKYLVDKAHSLGLRVLMDVVHSH 275 (755)
T ss_dssp CHHHHHHHTHHHHHHTTC--CEEEEESCEECSCGGGTTCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECchhcCCCCCCCCCccCCCCccCC-CCCCHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 5556554 6788888887 67877532210 11 1234443 5554 689999999999999998765 3
Q ss_pred cccCC--Cccccc--cccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 84 IKHED--GYFVYD--SGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 84 i~~~~--~~~~~~--~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+..+. ....|+ .+....+|..+++| + ...|. ...+|+.||++++...+.++.+++ .|||||-+|.-
T Consensus 276 ~~~~~~~g~~~fd~~~~~~~~yf~~~~~g--~-~~~w~--~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDGfR~Dav 346 (755)
T 3aml_A 276 ASNNVTDGLNGYDVGQNTHESYFHTGDRG--Y-HKLWD--SRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGV 346 (755)
T ss_dssp BCCCTTTSGGGGCSSCCGGGSSBCCGGGG--E-ETTTT--EECBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTH
T ss_pred cccccccchhccccCCCCCcceeecCCCC--c-cCCCC--CceeccCCHHHHHHHHHHHHHHHHHcCCCEEEecch
Confidence 33221 111122 11223344322222 1 11232 345899999999999999998887 89999999975
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.01 Score=59.14 Aligned_cols=132 Identities=15% Similarity=0.092 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-------C--ceee-eecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-------G--FRCF-TFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~--~~~f-~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..+.+.++.+++.|| ++|||-+-+.. + ..+| ..|+ +|-+ +++|++.+|++|+++++-+.+ +
T Consensus 109 ~~~gl~~~LdyL~~lGv--~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~-~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V~NH 185 (655)
T 3ucq_A 109 TLKGVEERLDYLEGLGV--KYLHLMPLLRPREGENDGGYAVQDYRAVRP-DLGTMDDLSALARALRGRGISLVLDLVLNH 185 (655)
T ss_dssp SHHHHHTTHHHHHHTTC--CEEEECCCEEECSSCCGGGTSEEEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHhhHHHHHcCC--CEEEECCCcCCCCCCCCCCcCCcCcCccCc-cCCCHHHHHHHHHHHHHCCCEEEEEeeccc
Confidence 56778888888888886 77887654421 1 1233 3443 5654 689999999999999987655 2
Q ss_pred cccCCCccccccc-----cccceeeecCCC-------------------Cce----------eeeecCC---CccCCCCC
Q 020492 84 IKHEDGYFVYDSG-----SKIDVWIQKADG-------------------TPF----------IGEVWPG---PCVFPDYT 126 (325)
Q Consensus 84 i~~~~~~~~~~~~-----~~~~~~~~~~~g-------------------~~~----------~~~~w~g---~~~~~Df~ 126 (325)
++.+.. -+.++ ...++++..+++ ... ....|.. ...-+|+.
T Consensus 186 ~s~~~~--wf~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~qpDLn~~ 263 (655)
T 3ucq_A 186 VAREHA--WAQKARAGDPKYRAYFHLFPDRRGPDAFEATLPEIFPDFAPGNFSWDEEIGEGEGGWVWTTFNSYQWDLNWA 263 (655)
T ss_dssp EETTSH--HHHHHHTTCHHHHTTBCEESSSHHHHHHHTTCCCSCTTTSCSSEEEETTSSSSSCEEEECSSSTTEEEBCTT
T ss_pred cccchH--HHHHhhcCCCCCcccEEEcCCCCCCccccccCccccccCCCCcccccccccccCCceEeccccCCCCccCCC
Confidence 333221 01100 011222111100 000 0001110 11247899
Q ss_pred ChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 127 QSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 127 ~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
||++++...+.++.+.+.|||||-+|..
T Consensus 264 np~V~~~i~~~l~~w~~~GvDGfRlDa~ 291 (655)
T 3ucq_A 264 NPDVFLEFVDIILYLANRGVEVFRLDAI 291 (655)
T ss_dssp SHHHHHHHHHHHHHHHTTTCCEEEETTG
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEech
Confidence 9999999999999888999999999976
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.021 Score=56.90 Aligned_cols=133 Identities=14% Similarity=0.091 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCCC-----c----eee-eecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMDG-----F----RCF-TFDKERFP---DPKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~-----~----~~f-~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-..|.+.++.+++.|| ++|||-+-+... + .+| .+|+ +|- ++++|++.+|++|+++++-+.+ +
T Consensus 104 dl~gi~~~LdyL~~LGv--~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp-~~Gt~~df~~Lv~~aH~~GI~VilD~V~NH 180 (644)
T 3czg_A 104 TLQGVAERVPYLQELGV--RYLHLLPFLRARAGDNDGGFAVSDYGQVEP-SLGSNDDLVALTSRLREAGISLCADFVLNH 180 (644)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEECCCBCBCSSCCTTTTSBSCTTSBCG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCCCcCCCCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEecCC
Confidence 55677777788888886 889886544311 1 122 3332 344 3689999999999999987665 3
Q ss_pred cccCCCccccccc-----cccceeeecCCCC-------------------cee-----ee-ecCC---CccCCCCCChHH
Q 020492 84 IKHEDGYFVYDSG-----SKIDVWIQKADGT-------------------PFI-----GE-VWPG---PCVFPDYTQSKV 130 (325)
Q Consensus 84 i~~~~~~~~~~~~-----~~~~~~~~~~~g~-------------------~~~-----~~-~w~g---~~~~~Df~~p~a 130 (325)
++.+.. -++++ .-.++++..+++. .+. +. .|.. ...-+|+.||++
T Consensus 181 ~s~~~~--wf~~~~~~~~~y~d~y~~~~~~~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~V 258 (644)
T 3czg_A 181 TADDHA--WAQAARAGDARYLDYYHHFADRTVPDRYEATLGQVFPHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPAV 258 (644)
T ss_dssp EETTSH--HHHHHHTTCHHHHTTBCEESSSHHHHHHHHHCCCC------CCEEEETTTTEEEECSSSTTEEEBCTTSHHH
T ss_pred cccchh--hHHHHhcCCCcccCceecCCCCCCCcchhhcccccCCCCCCCCccccCCCCceEecccccCCCcCCCCCHHH
Confidence 332221 11110 1122333221100 000 00 0100 012378999999
Q ss_pred HHHHHHHHHhhhhCCccEEEecCCC
Q 020492 131 RSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 131 ~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
++...+.++.+++.|||||-+|...
T Consensus 259 ~~~i~~~~~~wl~~GvDGfRlDa~~ 283 (644)
T 3czg_A 259 FGDMALAMLRLANLGVEAFRLDSTA 283 (644)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEETGG
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccc
Confidence 9999999999889999999999753
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.025 Score=56.61 Aligned_cols=134 Identities=18% Similarity=0.224 Sum_probs=77.6
Q ss_pred CHHHHHHHHH--HHHhcCCCceEEEEecccC---------------C--Cc--ee-eeecCCCCCC---hHHHHHHHHHC
Q 020492 18 SDKRVREICR--TFREKGIPCDVIWMDIDYM---------------D--GF--RC-FTFDKERFPD---PKSLAADLHLN 72 (325)
Q Consensus 18 ~~~~v~~~~~--~~~~~~iP~d~i~iD~~w~---------------~--~~--~~-f~~d~~~FPd---~~~~~~~L~~~ 72 (325)
+-..|.+-++ .++++|| ++|||-+-+. . ++ .+ +..|+ +|-. +++|++++|++
T Consensus 53 dl~gi~~kLd~~yLk~LGv--taIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp-~~Gt~~dfk~Lv~~aH~~ 129 (683)
T 3bmv_A 53 DWQGIINKINDGYLTGMGV--TAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNP-YFGSFTDFQNLINTAHAH 129 (683)
T ss_dssp CHHHHHHHHHTSTTGGGTC--CEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHhcCHHHHHHcCC--CEEEeCccccCcccccccccccCCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHC
Confidence 5566777777 7777775 7788764321 1 11 23 44554 6664 68999999999
Q ss_pred CCEEEeeeCC-ccccCCC-ccccccccc---cceeeecC--C-CCcee---eeecCC----------CccCCCCCChHHH
Q 020492 73 GFKAIWMLDP-GIKHEDG-YFVYDSGSK---IDVWIQKA--D-GTPFI---GEVWPG----------PCVFPDYTQSKVR 131 (325)
Q Consensus 73 G~k~~~~~~P-~i~~~~~-~~~~~~~~~---~~~~~~~~--~-g~~~~---~~~w~g----------~~~~~Df~~p~a~ 131 (325)
|+|+++-+-+ ++..... .+.|.+... .+.++... + ..-+. +..|.. ...-+|+.||+++
T Consensus 130 GikVilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~y~~~~~~pdLn~~np~Vr 209 (683)
T 3bmv_A 130 NIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTID 209 (683)
T ss_dssp TCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHH
T ss_pred CCEEEEEEcccccccccccCcchhccCccccCCcccccCCCCcccccccCCCCCcCCcccccccCcCCCCCcccCCHHHH
Confidence 9999997655 2322210 011110000 00011000 0 00000 011110 1223788999999
Q ss_pred HHHHHHHHhhhhCCccEEEecCC
Q 020492 132 SWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 132 ~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+...+.++.+++.|||||-+|..
T Consensus 210 ~~i~~~l~~Wl~~GVDGfRlDa~ 232 (683)
T 3bmv_A 210 SYLKSAIKVWLDMGIDGIRLDAV 232 (683)
T ss_dssp HHHHHHHHHHHHTTCCEEEESCG
T ss_pred HHHHHHHHHHHhCCCCEEEEecc
Confidence 99999999988999999999965
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.042 Score=54.17 Aligned_cols=34 Identities=21% Similarity=0.048 Sum_probs=29.9
Q ss_pred CCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 122 FPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 122 ~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
-+|+.||++++...+.++.+++ .|||||-+|...
T Consensus 319 dLn~~np~Vr~~l~~~l~~Wl~e~GVDGfRlDaa~ 353 (599)
T 3bc9_A 319 DVDYENEAVQNDVIDWGQWIINNIDFDGFRLDAVK 353 (599)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHTTCCCEEEETTGG
T ss_pred CcCCCCHHHHHHHHHHHHHHHHcCCCCEEEecccc
Confidence 3678999999999999998886 899999999863
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.049 Score=52.56 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=29.7
Q ss_pred CCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 122 FPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 122 ~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
-+|+.||++++...+.++.+++ .|||||-+|...
T Consensus 203 dLn~~np~V~~~l~~~~~~w~~~~gvDGfRlDaa~ 237 (515)
T 1hvx_A 203 DLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVK 237 (515)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTGG
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhcCCCEEEEehhh
Confidence 3688999999999999988885 899999999864
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.016 Score=55.45 Aligned_cols=125 Identities=10% Similarity=0.070 Sum_probs=72.7
Q ss_pred HHHHHH-HHHHHhcCCCceEEEEecccCC----------Cc--eeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-
Q 020492 20 KRVREI-CRTFREKGIPCDVIWMDIDYMD----------GF--RCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDP- 82 (325)
Q Consensus 20 ~~v~~~-~~~~~~~~iP~d~i~iD~~w~~----------~~--~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P- 82 (325)
..|.+- ++.++++| +++|||-+-+.. ++ .+|..|+ +|. ++++|++.+|++|+|+++-+.+
T Consensus 22 ~gi~~~~ldyL~~LG--v~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp-~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 22 NDIADECERFLQPQG--FGGVQISPPNEYLVADGRPWWERYQPVSYIINT-RSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp HHHHHHHHHTTTTTT--EEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEE-TTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHcC--CCEEEeCccccccCCCCCCcccccccccccccC-CCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 344443 35555555 588988643321 11 2355554 454 3689999999999999987654
Q ss_pred ccccCC------CccccccccccceeeecCCCCce-----ee----eecC----------CCccCCCCCChHHHHHHHHH
Q 020492 83 GIKHED------GYFVYDSGSKIDVWIQKADGTPF-----IG----EVWP----------GPCVFPDYTQSKVRSWWGSL 137 (325)
Q Consensus 83 ~i~~~~------~~~~~~~~~~~~~~~~~~~g~~~-----~~----~~w~----------g~~~~~Df~~p~a~~w~~~~ 137 (325)
++..+. .+ ++.. ..++ .+.|+ .+ ..|. ....-+|+.||++++...+.
T Consensus 99 H~~~~~~~~~~~~~--~~~~-~~~~-----~~~p~~~~~f~~~~~i~~~~~~~~~~~~~~~~~pdLn~~np~V~~~i~~~ 170 (471)
T 1jae_A 99 HMTGMNGVGTSGSS--ADHD-GMNY-----PAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDY 170 (471)
T ss_dssp BCCSSCEEBTTSCE--EBTT-TTBB-----TTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTSHHHHHHHHHH
T ss_pred cccCCCCcCCCCCc--cCcc-CCcC-----CCCCCCHhHcCCCCCccCCCChhhccccccCCCCccCcCCHHHHHHHHHH
Confidence 333221 11 1000 0000 00010 00 0111 11223788999999999999
Q ss_pred HHhhhhCCccEEEecCCC
Q 020492 138 VKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 138 ~~~~~~~Gvdg~~~D~~e 155 (325)
++.+++.|||||-+|...
T Consensus 171 ~~~w~~~gvDGfRlDa~~ 188 (471)
T 1jae_A 171 MNHMIDLGVAGFRVDAAK 188 (471)
T ss_dssp HHHHHHTTCCEEEETTGG
T ss_pred HHHHHHcCCCEEEeechh
Confidence 999889999999999864
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0091 Score=60.53 Aligned_cols=133 Identities=11% Similarity=0.094 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------------------Cce--e-eeecCCCCC----------ChHHHH
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------------------GFR--C-FTFDKERFP----------DPKSLA 66 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------------------~~~--~-f~~d~~~FP----------d~~~~~ 66 (325)
+-..+.+-++.++++|| ++|+|-+-+.. ++. + |..++ +|- ++++||
T Consensus 203 t~~gl~~~l~yLk~LGv--t~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~-~yGt~~~~~~~~~efk~lV 279 (750)
T 1bf2_A 203 TYYGAGLKASYLASLGV--TAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDR-RYAYNKAAGGPTAEFQAMV 279 (750)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCG-GGCSCCSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC--CEEEECCcccCccccccccccccccccccCcCcccccccCc-cccCCCCCccHHHHHHHHH
Confidence 45667777888888886 77876532210 111 1 22332 332 368999
Q ss_pred HHHHHCCCEEEeeeCC-ccccCCCcc--------c--cccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHH
Q 020492 67 ADLHLNGFKAIWMLDP-GIKHEDGYF--------V--YDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 67 ~~L~~~G~k~~~~~~P-~i~~~~~~~--------~--~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~ 135 (325)
+.+|++|++|++-+.+ ++....... . +.......+|...++...|. .|.|...-+|+.+|++++...
T Consensus 280 ~~~H~~Gi~VilDvV~NH~~~~~~~~~~d~~~~p~~~~~~~d~~~~y~~~~~~~~~~--~~~g~~~~ln~~~p~V~~~i~ 357 (750)
T 1bf2_A 280 QAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFY--DNTGIGANFNTYNTVAQNLIV 357 (750)
T ss_dssp HHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHHBCBCTTSSSBC--CSSSSSCCBCTTSHHHHHHHH
T ss_pred HHHHHCCCEEEEEEecccccCcccccccccccCCCcccccCCCCcceEECCCCCcee--cCCCcCCccccCCHHHHHHHH
Confidence 9999999999997665 233221110 0 00000011222222111111 133334468999999999999
Q ss_pred HHHHhhhh-CCccEEEecCCC
Q 020492 136 SLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 136 ~~~~~~~~-~Gvdg~~~D~~e 155 (325)
+.++.+++ .|||||-+|...
T Consensus 358 d~l~~W~~e~gvDGfR~D~a~ 378 (750)
T 1bf2_A 358 DSLAYWANTMGVDGFRFDLAS 378 (750)
T ss_dssp HHHHHHHHTSCCCEEEETTGG
T ss_pred HHHHHHHHHcCCcEEEEechh
Confidence 99998887 899999999753
|
| >2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.018 Score=51.88 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=64.6
Q ss_pred CceEEEEecccCCC-ceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCccc-cccc---cccceeeecCCCC
Q 020492 35 PCDVIWMDIDYMDG-FRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFV-YDSG---SKIDVWIQKADGT 109 (325)
Q Consensus 35 P~d~i~iD~~w~~~-~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~-~~~~---~~~~~~~~~~~g~ 109 (325)
++|.+++|.+..+. .+.|+ ++-|+.||+.|.+++-+++-.-.. .+.. |++. ..+.++....
T Consensus 39 ~yd~vViD~~~~g~~~~~~t---------~~~i~~L~~~G~~viaYlSvGe~E--~~R~y~~~~w~~~~~~~lg~~n--- 104 (309)
T 2aam_A 39 GFEIAVIDYSKDGSESGEYS---------PEEIKIMVDAGVVPVAYVNIGQAE--DYRFYWKESWYTNTPEWLGEED--- 104 (309)
T ss_dssp CCSEEEECSBSSSSGGGBCC---------HHHHHHHHHTTCEEEEEEESSEEE--TTSTTCCTHHHHSCCTTEEEEE---
T ss_pred CCCEEEEcCCcccccccCCC---------HHHHHHHHhCCCEEEEEEeccccc--ccchhhhhccccCCHHHhCccC---
Confidence 78999999664211 01122 366889999999998887632111 1111 1110 1222332211
Q ss_pred ceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 110 PFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 110 ~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
..|+| ..++|.++|+.++...+.++++++.|+||+-+|.-+
T Consensus 105 ----~~W~g-e~~vDi~~~~w~~i~~~rl~~~~~kG~DGvflDnvD 145 (309)
T 2aam_A 105 ----PAWPG-NYFVKYWYNEWKEIVFSYLDRVIDQGFKGIYLDRID 145 (309)
T ss_dssp ----TTEEE-EEEECTTSHHHHHHHHHHHHHHHHTTCSEEEEECTT
T ss_pred ----CCCCC-ceEEecCCHHHHHHHHHHHHHHHHcCCCeEeecccc
Confidence 23544 356899999999999989998889999999999644
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=96.11 E-value=0.022 Score=55.71 Aligned_cols=124 Identities=19% Similarity=0.198 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC----C--Cc---eeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-cc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM----D--GF---RCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GI 84 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~--~~---~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i 84 (325)
+-..+.+.++.+++.|| ++|++-+-.. . ++ .-|..++ +|- +++.||+.+|++|+++++-+.+ ++
T Consensus 117 ~~~~~~~~l~~l~~lG~--~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~-~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~ 193 (558)
T 3vgf_A 117 TFEGVIRKLDYLKDLGI--TAIEIMPIAQFPGKRDWGYDGVYLYAVQN-SYGGPEGFRKLVDEAHKKGLGVILDVVYNHV 193 (558)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEECCCEECSSSCCCSTTCCEEEEECG-GGTHHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHHHHHHHHcCC--cEEEECCcccCCCCCCcCccccccccccc-ccCCHHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 55677788888888886 6777643221 0 11 1244443 443 4689999999999999997765 44
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~ 154 (325)
..+..+ +. ....+|... + ...|.....+-+..+|++++...+.++.++ +.|||||-+|..
T Consensus 194 ~~~~~~--~~--~~~~~~~~~-----~-~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~~gvDGfR~D~~ 254 (558)
T 3vgf_A 194 GPEGNY--MV--KLGPYFSQK-----Y-KTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLSAV 254 (558)
T ss_dssp CSSSCC--GG--GTSCCEEEE-----E-EETTEEEECSSSTTHHHHHHHHHHHHHHHHHHHCCCEEEESCG
T ss_pred cCCCCc--cc--ccCCccCCC-----C-CCCCCCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecc
Confidence 443321 11 111233211 0 011211122223457899999999999888 589999999985
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=95.91 E-value=0.094 Score=52.49 Aligned_cols=134 Identities=15% Similarity=0.201 Sum_probs=77.3
Q ss_pred CHHHHHHHHH--HHHhcCCCceEEEEecccC----------------CCc--ee-eeecCCCCCC---hHHHHHHHHHCC
Q 020492 18 SDKRVREICR--TFREKGIPCDVIWMDIDYM----------------DGF--RC-FTFDKERFPD---PKSLAADLHLNG 73 (325)
Q Consensus 18 ~~~~v~~~~~--~~~~~~iP~d~i~iD~~w~----------------~~~--~~-f~~d~~~FPd---~~~~~~~L~~~G 73 (325)
+-..|.+-++ .++++|| ++|||-+-+. .++ .+ +..|+ +|-. +++|++.+|++|
T Consensus 53 dl~gi~~kLd~~yLk~LGv--t~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp-~~Gt~~dfk~Lv~~aH~~G 129 (686)
T 1d3c_A 53 DWQGIINKINDGYLTGMGV--TAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNP-AYGTIADFQNLIAAAHAKN 129 (686)
T ss_dssp CHHHHHHHHHTTTTGGGTC--CEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHhcCHHHHHhcCC--CEEEeCCcccCCcccccccCccCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHCC
Confidence 5566777777 7777775 7788764321 011 12 45554 6654 689999999999
Q ss_pred CEEEeeeCC-ccccCCC-ccccccccc---cceeeecC-C--CCcee---eeecCC----------CccCCCCCChHHHH
Q 020492 74 FKAIWMLDP-GIKHEDG-YFVYDSGSK---IDVWIQKA-D--GTPFI---GEVWPG----------PCVFPDYTQSKVRS 132 (325)
Q Consensus 74 ~k~~~~~~P-~i~~~~~-~~~~~~~~~---~~~~~~~~-~--g~~~~---~~~w~g----------~~~~~Df~~p~a~~ 132 (325)
+|+++-+-+ ++..... .+.|.+... .+.++... + ..-+. +..|.. ...-+|+.||++++
T Consensus 130 I~VilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~~~~pDLn~~np~Vr~ 209 (686)
T 1d3c_A 130 IKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDTQNLFHHNGGTDFSTTENGIYKNLYDLADLNHNNSTVDV 209 (686)
T ss_dssp CEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCSSSHHHHHHSBBTTEEEBCTTSHHHHH
T ss_pred CEEEEEeCcCccccccccccchhhcCccccCCcccccCCCCccCceecCCCCCcCCCccccccCcCCCCCcccCCHHHHH
Confidence 999987654 2322210 011110000 00011000 0 00000 011110 12247899999999
Q ss_pred HHHHHHHhhhhCCccEEEecCC
Q 020492 133 WWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 133 w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
...+.++.+++.|||||-+|..
T Consensus 210 ~i~~~l~~Wl~~GVDGfRlDa~ 231 (686)
T 1d3c_A 210 YLKDAIKMWLDLGIDGIRMNAV 231 (686)
T ss_dssp HHHHHHHHHHHTTCCEEEETTG
T ss_pred HHHHHHHHHHhCCCCEEEEecc
Confidence 9999999999999999999965
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.066 Score=51.19 Aligned_cols=34 Identities=18% Similarity=0.060 Sum_probs=29.6
Q ss_pred CCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 122 FPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 122 ~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
-+|+.||++++...+.++.+++ .|||||-+|...
T Consensus 205 dln~~np~V~~~l~~~~~~w~~~~gvDGfR~Da~~ 239 (485)
T 1wpc_A 205 DIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVK 239 (485)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGG
T ss_pred ccccCCHHHHHHHHHHHHHHHHhCCCCEEEhHhhh
Confidence 3678999999999999998885 899999999853
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.016 Score=59.95 Aligned_cols=89 Identities=13% Similarity=0.009 Sum_probs=59.0
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceeee-cCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWIQ-KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.+|++|++|++-+.+ ++..+.. ..|+.. .++++.+ +++|.. .. +.|-..-+|+.||++++...+.+
T Consensus 533 dfk~LV~~aH~~GI~VILDvV~NHt~~~~~-~~f~~~-~p~y~~~~~~~g~~-~~--~~g~~~dln~~~p~Vr~~i~d~l 607 (921)
T 2wan_A 533 ELKQLIQSLHQQRIGVNMDVVYNHTFDVMV-SDFDKI-VPQYYYRTDSNGNY-TN--GSGCGNEFATEHPMAQKFVLDSV 607 (921)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCCSCSSS-SHHHHH-STTTTBCBCTTSCB-CC--TTSSSCCBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEEcccccccccc-ccccCC-CCCeEEEcCCCCcc-cC--CCCcccccccCCHHHHHHHHHHH
Confidence 3799999999999999997765 3333221 123321 2334433 233432 11 11222348999999999999999
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+.+++ .|||||-+|..
T Consensus 608 ~~Wl~e~gVDGfR~Da~ 624 (921)
T 2wan_A 608 NYWVNEYHVDGFRFDLM 624 (921)
T ss_dssp HHHHHHHCCCEEEETTG
T ss_pred HHHHHHcCCCEEEeccc
Confidence 98885 89999999975
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.064 Score=53.71 Aligned_cols=130 Identities=18% Similarity=0.304 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccC-----------C--Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEE
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYM-----------D--GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAI 77 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~-----------~--~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~ 77 (325)
.+-..|.+-++.++++|| ++|||-+-+. . ++ .+ +..|+ +|-. +++|++++|++|+|++
T Consensus 49 Gdl~gi~~kLdyLk~LGv--~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp-~~Gt~~df~~Lv~~aH~~GikVi 125 (686)
T 1qho_A 49 GDLEGVRQKLPYLKQLGV--TTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEE-HFGNWTTFDTLVNDAHQNGIKVI 125 (686)
T ss_dssp CCHHHHHHTHHHHHHHTC--CEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHhhHHHHhcCC--CEEEECccccCCcccccCCCCCcCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEE
Confidence 356778888888888886 7788764331 1 11 23 44554 6764 6899999999999999
Q ss_pred eeeCC-ccccCCC-cc-------cccccc-------c--cceeeecCCCCceeeeecC---------------CCccCCC
Q 020492 78 WMLDP-GIKHEDG-YF-------VYDSGS-------K--IDVWIQKADGTPFIGEVWP---------------GPCVFPD 124 (325)
Q Consensus 78 ~~~~P-~i~~~~~-~~-------~~~~~~-------~--~~~~~~~~~g~~~~~~~w~---------------g~~~~~D 124 (325)
+-+.+ +...... .+ .|+.+. . ..+|-... + + ..|. ....-+|
T Consensus 126 lD~V~NHts~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~f~~~~-~---i-~~w~~~~~~~y~~~~~~~~~~~pDLn 200 (686)
T 1qho_A 126 VDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNG-D---I-SNWDDRYEAQWKNFTDPAGFSLADLS 200 (686)
T ss_dssp EEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSSSCTTTCCBCCSC-B---C-SCTTCHHHHHHSBCEETTTEEEEEBC
T ss_pred EEeccccccccccccccccccCccccCCcccccCCCCcccCeeecCC-C---c-CcCCCCcccceeecccCCcCCCCccc
Confidence 87655 2222110 00 111110 0 11111000 0 0 0111 1123468
Q ss_pred CCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 125 YTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 125 f~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+.||++++...+.++.+++.|||||-+|.-
T Consensus 201 ~~np~Vr~~l~~~~~~Wl~~GVDGfRlDa~ 230 (686)
T 1qho_A 201 QENGTIAQYLTDAAVQLVAHGADGLRIDAV 230 (686)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCCEEEETTG
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 899999999999999988999999999975
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.037 Score=57.91 Aligned_cols=86 Identities=23% Similarity=0.253 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceeee-cCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWIQ-KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.+|++|++|++-+.+ +..... .|+. ...+++.. +.+|.++. .|.+ .-++..+|++++...+.+
T Consensus 563 efk~lV~~~H~~GI~VIlDvV~NHt~~~~---~~~~-~~~~yy~~~~~~g~~~~--~~~~--~~l~~~~~~vr~~i~d~l 634 (1014)
T 2ya1_A 563 EFKNLINEIHKRGMGAILDVVYNHTAKVD---LFED-LEPNYYHFMDADGTPRT--SFGG--GRLGTTHHMTKRLLIDSI 634 (1014)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTTCCSCHH---HHHT-TSTTTSBCBCTTCCBCE--ETTE--ECBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEEecccccccc---cccc-CCCCeeEEeCCCCCccc--CCCC--CCcCcCCHHHHHHHHHHH
Confidence 4689999999999999997665 332211 1221 23344432 34454432 2333 247889999999999988
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+.+++ .|||||-+|..
T Consensus 635 ~~W~~e~gvDGfR~D~~ 651 (1014)
T 2ya1_A 635 KYLVDTYKVDGFRFDMM 651 (1014)
T ss_dssp HHHHHHHCCCEEEETTG
T ss_pred HHHHHhcCceEEEEeCC
Confidence 88886 79999999974
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.015 Score=54.91 Aligned_cols=133 Identities=18% Similarity=0.154 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecccC-------CCc--eee----------eecCCCCCC---hHHHHHHHHHCCCEE
Q 020492 19 DKRVREICRTFREKGIPCDVIWMDIDYM-------DGF--RCF----------TFDKERFPD---PKSLAADLHLNGFKA 76 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD~~w~-------~~~--~~f----------~~d~~~FPd---~~~~~~~L~~~G~k~ 76 (325)
-..|.+-++.+++.|+ ++||+-+-+. .++ .+| +.|+ +|-. +++|++++|++|+|+
T Consensus 27 ~~gi~~~Ldyl~~lGv--t~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~-~~Gt~~df~~lv~~~H~~Gi~V 103 (435)
T 1mxg_A 27 WDHIRSKIPEWYEAGI--SAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVET-RFGSKEELVRLIQTAHAYGIKV 103 (435)
T ss_dssp HHHHHHHHHHHHHHTC--CEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSC-SSCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCC-CCCCHHHHHHHHHHHHHCCCEE
Confidence 4667788888888886 7788754221 122 122 1332 4544 689999999999999
Q ss_pred EeeeCC-ccccCCC----c---ccccccc--ccceeeecC---CCCceeeeecCC---CccCCCCCChHHHHHH----HH
Q 020492 77 IWMLDP-GIKHEDG----Y---FVYDSGS--KIDVWIQKA---DGTPFIGEVWPG---PCVFPDYTQSKVRSWW----GS 136 (325)
Q Consensus 77 ~~~~~P-~i~~~~~----~---~~~~~~~--~~~~~~~~~---~g~~~~~~~w~g---~~~~~Df~~p~a~~w~----~~ 136 (325)
++-+.+ ++..+.. + ..+.... ..+.+.++. .+..+ ..++.| ...-+|+.||+++++. .+
T Consensus 104 ilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~g~~~~~~dln~~np~V~~~l~~~~~~ 182 (435)
T 1mxg_A 104 IADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLDFHPNEL-HCCDEGTFGGFPDICHHKEWDQYWLWKSNES 182 (435)
T ss_dssp EEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGGBSSSSS-CSCCSCCCTTSCBBCTTSHHHHHHHTSSTTS
T ss_pred EEEECcccccCCCcccCCCCCccccccCCCccCCCCccccccCCCCCc-CccCCCcccCccccCCCCHHHHHHHHHHHHH
Confidence 997665 3332210 0 0000000 000000000 00000 001111 1234688999999765 45
Q ss_pred HHHhhhhCCccEEEecCCC
Q 020492 137 LVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 137 ~~~~~~~~Gvdg~~~D~~e 155 (325)
.++.+.+.|||||-+|...
T Consensus 183 ~~~~w~~~gvDGfR~Da~~ 201 (435)
T 1mxg_A 183 YAAYLRSIGFDGWRFDYVK 201 (435)
T ss_dssp HHHHHHHTTCCEEEETTGG
T ss_pred HHHHHHHCCCCEEEhhhhh
Confidence 6666778999999999863
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.061 Score=53.44 Aligned_cols=133 Identities=16% Similarity=0.117 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-+-|.+-++-++++|| ++|||-+=+.. + ..+ +.+|+ +|-. +++||+++|++|+|+++-+.| +++.
T Consensus 237 dl~Gi~~kLdYLk~LGv--t~I~L~Pif~s~~~~GYd~~dy~~idp-~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~ 313 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGI--NAIYLTPIFSSLTYHGYDIVDYFHVAR-RLGGDRAFVDLLSELKRFDIKVILDGVFHHTSF 313 (645)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEEESSTTCSSEEEEEEECG-GGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHhhHHHHHcCC--CEEEECCCCCCCCCCCcCccCCCccCc-ccCCHHHHHHHHHHhhhcCCEEEEEeccccccc
Confidence 45667777888888886 78887643211 1 123 34544 5654 689999999999999997655 2322
Q ss_pred CCCccccccc-------cccceeeecCCC-Cc-------eee-----------------eecCCC--ccCCCCCChHHHH
Q 020492 87 EDGYFVYDSG-------SKIDVWIQKADG-TP-------FIG-----------------EVWPGP--CVFPDYTQSKVRS 132 (325)
Q Consensus 87 ~~~~~~~~~~-------~~~~~~~~~~~g-~~-------~~~-----------------~~w~g~--~~~~Df~~p~a~~ 132 (325)
+.. -++++ .-.+++...... .+ ..+ ..+.+. ..-+|+.||++++
T Consensus 314 ~h~--wf~~~~~~~~~s~~~d~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~V~~ 391 (645)
T 4aef_A 314 FHP--YFQDVVRKGENSSFKNFYRIIKFPVVSKEFLQILHSKSSWEEKYKKIKSLGWNYESFFSVWIMPRLNHDNPKVRE 391 (645)
T ss_dssp TSH--HHHHHHHHSTTCTTGGGBCBSSSSCSCTTHHHHHHHSCGGGTTHHHHHHHCCSBCEETTEEEEEBBCTTSHHHHH
T ss_pred CCc--hhhhHhhcCCCCCcccccEeccCCCcccccccccCCCcccccccccccccccccccccccccCccccccCHHHHH
Confidence 211 11110 111222111000 00 000 000011 1236889999999
Q ss_pred HHHHHHHhhhhCCccEEEecCCC
Q 020492 133 WWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 133 w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
...+.++..++.|||||-+|...
T Consensus 392 ~~~~~~~~Wl~~gvDGfR~D~a~ 414 (645)
T 4aef_A 392 FIKNVILFWTNKGVDGFRMDVAH 414 (645)
T ss_dssp HHHHHHHHHHHTTCCEEEETTGG
T ss_pred HHHHHHHHHHhcCCCEEEecccc
Confidence 99999998888999999999753
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.021 Score=57.58 Aligned_cols=86 Identities=23% Similarity=0.253 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccccccceeee-cCCCCceeeeecCCCccCCCCCChHHHHHHHHHH
Q 020492 61 DPKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKIDVWIQ-KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
++++||+.+|++|++|++-+.+ +..... .|+. ...+++.. +.+|.++. .|.+ .-++..+|++++...+.+
T Consensus 256 efk~lV~~~H~~Gi~VilDvV~NH~~~~~---~~~~-~~~~yy~~~~~~g~~~~--~~~~--~~l~~~~~~v~~~i~d~l 327 (714)
T 2ya0_A 256 EFKNLINEIHKRGMGAILDVVYNHTAKVD---LFED-LEPNYYHFMDADGTPRT--SFGG--GRLGTTHHMTKRLLIDSI 327 (714)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTBCSCHH---HHHT-TSTTTSBCBCTTCCBCE--ETTE--EBBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeccCcccCcc---cccc-cCCCeeEEeCCCCCCcc--ccCC--CCcccCCHHHHHHHHHHH
Confidence 3689999999999999997665 222211 1221 23344432 34454332 2333 237889999999999988
Q ss_pred Hhhhh-CCccEEEecCC
Q 020492 139 KDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~-~Gvdg~~~D~~ 154 (325)
+.+++ .|||||-+|..
T Consensus 328 ~~W~~e~~vDGfR~D~~ 344 (714)
T 2ya0_A 328 KYLVDTYKVDGFRFDMM 344 (714)
T ss_dssp HHHHHHHCCCEEEETTG
T ss_pred HHHHHhhCceEEEEeCC
Confidence 88886 79999999975
|
| >2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.089 Score=52.42 Aligned_cols=62 Identities=18% Similarity=0.292 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEE---ecccCCC---ceeeeecC-CCCCC--hHHHHHHHHHCCCEEEeeeC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWM---DIDYMDG---FRCFTFDK-ERFPD--PKSLAADLHLNGFKAIWMLD 81 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~i---D~~w~~~---~~~f~~d~-~~FPd--~~~~~~~L~~~G~k~~~~~~ 81 (325)
|.+.+++.|+-..++|+ +.+.+ |.+|... ...+.||- +-+|| ++++++.-+++|+++++|..
T Consensus 369 nte~~K~YIDFAA~~G~--eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~ 439 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGF--DAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHE 439 (738)
T ss_dssp CHHHHHHHHHHHHHTTC--SEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEc
Confidence 67889999999999997 67889 9888532 22222331 34566 79999999999999999854
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.057 Score=50.81 Aligned_cols=102 Identities=13% Similarity=0.063 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC---C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCCc-ccc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD---G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDPG-IKH 86 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~---~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P~-i~~ 86 (325)
.+-..|.+-++.+++.|| ++|||-+-+.. + ..+ +..|+ +|.. ++++++.+|++|+|+++-+.+. ++
T Consensus 33 Gdl~gi~~~Ldyl~~LGv--~~i~l~Pi~~~~~~~y~~~dy~~idp-~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s- 108 (424)
T 2dh2_A 33 GNLAGLKGRLDYLSSLKV--KGLVLGPIHKNQKDDVAQTDLLQIDP-NFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG- 108 (424)
T ss_dssp CSHHHHHTTHHHHHHTTC--SEEEECCCEEECTTCSTTEEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEECCTTTTS-
T ss_pred CCHHHHHHHHHHHHHcCC--CEEEECCCCCCCCCCCCcccccccCc-cCCCHHHHHHHHHHHHHCCCEEEEEECCCcCC-
Confidence 356777778888888876 88998754422 1 123 34554 5654 6899999999999999876542 21
Q ss_pred CCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 87 EDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+ ..+| .-.+|++++...+.++..++.|||||-+|.-
T Consensus 109 ~-----------~~wF---------------------~~q~~~Vr~~~~~~~~~Wl~~gvDGfRlD~v 144 (424)
T 2dh2_A 109 E-----------NSWF---------------------STQVDTVATKVKDALEFWLQAGVDGFQVRDI 144 (424)
T ss_dssp S-----------STTC---------------------SSCHHHHHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred C-----------cccc---------------------cccCHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 1 1122 0124789999999998888899999999964
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=94.24 E-value=0.28 Score=48.86 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----Cc--eee-eecCCCCCC---hHHHHHHHHHCCCEEEeeeCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----GF--RCF-TFDKERFPD---PKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~f-~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P 82 (325)
+-..+.+.++.++++|| ++|+|-+-+.. ++ .+| .+++ +|-. +++|++.+|++|+++++-+.+
T Consensus 58 ~~~g~~~~l~yl~~lGv--~~i~l~Pi~~~~~~~gY~~~dy~~i~~-~~Gt~~d~~~lv~~~h~~gi~vi~D~V~ 129 (669)
T 3k8k_A 58 DLNGVTQKLDYLNQLGV--KALWLSPIHPCMSYHGYDVTDYTKVNP-QLGTESDFDRLVTEAHNRGIKIYLDYVM 129 (669)
T ss_dssp CHHHHHTTHHHHHTTTC--SEEEECCCSSBSSTTCCSBSCTTSCCT-TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEecccccCCCCCCCCccccccccc-ccCCHHHHHHHHHHHHHcCCEEEEEECc
Confidence 55777777888877775 88998754422 11 122 3433 4554 689999999999999987655
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=93.05 E-value=0.089 Score=52.20 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=28.5
Q ss_pred CCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 124 DYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 124 Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
|+.||++++++.+.++..++ .|||||-+|...
T Consensus 356 n~~np~V~~~l~d~~~~W~~e~gvDGfRlD~a~ 388 (637)
T 1gjw_A 356 KEPNRELWEYLAGVIPHYQKKYGIDGARLDMGH 388 (637)
T ss_dssp SSBCHHHHHHHTTHHHHHHHHHCCCEEEESSGG
T ss_pred ccCCHHHHHHHHHHHHHHhhhcCCceEEecchh
Confidence 67899999999999998886 799999999864
|
| >1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* | Back alignment and structure |
|---|
Probab=92.66 E-value=0.52 Score=45.14 Aligned_cols=129 Identities=19% Similarity=0.187 Sum_probs=74.8
Q ss_pred CHHHHHHHHH-HHHhcCCCceEEEEeccc-CC-----Cc--ee-eeecCCCCCChHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICR-TFREKGIPCDVIWMDIDY-MD-----GF--RC-FTFDKERFPDPKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~-~~~~~~iP~d~i~iD~~w-~~-----~~--~~-f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-..+.+.++ .+ ..+ +++|||-+-+ .. ++ .+ +.+|+ +|...+++.+.++ |+|+++-+.+ +++.
T Consensus 18 ~~~~i~~~ld~yL--~~L-v~~IwL~Pi~~~~~~~~~GY~~~dy~~idp-~~Gt~~df~~Lv~--Gi~VilD~V~NH~s~ 91 (504)
T 1r7a_A 18 TIKSMTDILRTRF--DGV-YDGVHILPFFTPFDGADAGFDPIDHTKVDE-RLGSWDDVAELSK--THNIMVDAIVNHMSW 91 (504)
T ss_dssp SHHHHHHHHHHHS--TTT-CCEEEECCCEECSSSSSTTSSCSEEEEECT-TTCCHHHHHHHHT--TSEEEEEEECSEEET
T ss_pred CHHHHHHHHHHHH--HHH-hCeEEECCcccCCCCCCCCCCccChhhcCc-ccCCHHHHHHHHh--CCEEEEEECCCcCCC
Confidence 3456666666 44 445 7999987644 21 11 23 35654 7777666666554 9999987654 3332
Q ss_pred CCCcccccc-------ccccceeee-c---CCC---------------Cceeee--------ecCC---CccCCCCCChH
Q 020492 87 EDGYFVYDS-------GSKIDVWIQ-K---ADG---------------TPFIGE--------VWPG---PCVFPDYTQSK 129 (325)
Q Consensus 87 ~~~~~~~~~-------~~~~~~~~~-~---~~g---------------~~~~~~--------~w~g---~~~~~Df~~p~ 129 (325)
+.. -+.+ ..-.++++. + +++ .++..- .|.+ ...-+|+.||+
T Consensus 92 ~~~--~f~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~f~~~~pdLn~~np~ 169 (504)
T 1r7a_A 92 ESK--QFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDK 169 (504)
T ss_dssp TSH--HHHHHHHHGGGSTTGGGBCBHHHHCTTCBCHHHHHTSCCSSSSCSEEEEEETTEEEEEECSSSTTEEEBCTTSHH
T ss_pred cch--HHHHHhhcCCCCccccceEeccccCcCCCCCcchhhhcCCCCCCCCCCceEcCCceEEECccCCCCCccCCCCHH
Confidence 221 1111 111244432 1 111 111111 1221 12347899999
Q ss_pred HHHHHHHHHHhhhhCCccEEEecCC
Q 020492 130 VRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 130 a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+++...+.++.+++.|||||-+|..
T Consensus 170 Vr~~i~~~~~~W~~~gvDGfR~Da~ 194 (504)
T 1r7a_A 170 GWEYLMSIFDQMAASHVSYIRLDAV 194 (504)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETG
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccc
Confidence 9999999999888999999999984
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=92.14 E-value=1.5 Score=44.76 Aligned_cols=87 Identities=10% Similarity=-0.014 Sum_probs=53.8
Q ss_pred hHHHHHHHHHCCCEEEeeeCC-ccccCCCccccccc----cccce-eeecCCCCceeeeecCCCccCCCCCChHHHHHHH
Q 020492 62 PKSLAADLHLNGFKAIWMLDP-GIKHEDGYFVYDSG----SKIDV-WIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWG 135 (325)
Q Consensus 62 ~~~~~~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~----~~~~~-~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~ 135 (325)
+++||+.+|++|+|||+-+-| +.+.+.. -+.+. ....+ +...+++.+ .|.+.....++.+|.++++..
T Consensus 381 fk~LV~~aH~~GIkVIlDvV~NHts~~h~--wf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~ 454 (884)
T 4aio_A 381 YRQMVQALNRIGLRVVMDVVYNHLDSSGP--CGISSVLDKIVPGYYVRRDTNGQI----ENSAAMNNTASEHFMVDRLIV 454 (884)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSBCSCCSS--SSTTCCHHHHSTTTSBCBCTTSCB----CCTTSSSBBCTTSHHHHHHHH
T ss_pred HHHHHHHHHhcCCceeeeeccccccCCCc--chhhccccccCcceeeccCCCCCc----cCcCCccccCCCCchhhhhhh
Confidence 799999999999999997665 2222211 11111 11111 112223321 122234457889999999988
Q ss_pred HHHHhhh-hCCccEEEecCC
Q 020492 136 SLVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 136 ~~~~~~~-~~Gvdg~~~D~~ 154 (325)
+.++..+ +.++||+-+|..
T Consensus 455 d~~~~w~~~~~vDg~R~D~~ 474 (884)
T 4aio_A 455 DDLLNWAVNYKVDGFRFDLM 474 (884)
T ss_dssp HHHHHHHHHSCCCEEEETTG
T ss_pred hhhhhhhhhcccccCCcccc
Confidence 8777655 589999999875
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=91.85 E-value=0.86 Score=45.42 Aligned_cols=124 Identities=15% Similarity=0.095 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEec-ccC---CCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCcccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDI-DYM---DGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVY 93 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~-~w~---~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~ 93 (325)
..+..++.++.+++.|+ .++-+.. .|. ...+.|+ |..+..+++.+++.|+++++.+.++-.+ ..
T Consensus 21 ~~~~~~~Dl~~mk~~G~--n~vr~~if~W~~~eP~~g~~~-----f~~ld~~i~~~~~~Gi~vil~~~~~~~P-----~W 88 (675)
T 3tty_A 21 DKATMEEDMRMFNLAGI--DVATVNVFSWAKIQRDEVSYD-----FTWLDDIIERLTKENIYLCLATSTGAHP-----AW 88 (675)
T ss_dssp CHHHHHHHHHHHHHHTC--CEEEECSSCHHHHBSSSSCBC-----CHHHHHHHHHHHHTTCEEEEECCTTSCC-----HH
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEeeechhhhCCcCCccC-----HHHHHHHHHHHHHCCCEEEEeCCCCCCC-----hh
Confidence 56888999999999998 4565553 552 2223332 4467899999999999999876543211 11
Q ss_pred ccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh----C-CccEEEecCCCCCc
Q 020492 94 DSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY----N-GVDGIWNDMNEPAV 158 (325)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~----~-Gvdg~~~D~~e~~~ 158 (325)
-..+.++++..+.+|.+.. | |.....++++|..++.....++.+.+ . .|-+|-++ ||+..
T Consensus 89 l~~~~Pe~l~~d~~G~~~~---~-g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~-NE~g~ 153 (675)
T 3tty_A 89 MAKKYPDVLRVDYEGRKRK---F-GGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVS-NEYGG 153 (675)
T ss_dssp HHHHCGGGBCBCTTSCBCC---S-CSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECS-SSCCC
T ss_pred hhhcCCceeeecCCCcCcc---c-CCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEc-cccCC
Confidence 1113345566666665421 1 33344688999998888877776653 2 36676665 78764
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.97 E-value=0.89 Score=45.47 Aligned_cols=62 Identities=16% Similarity=0.223 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------GF--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P 82 (325)
+-+.+.+.++.+++.|| ++|++-+-+.. ++ .+ +..|+ +|. +++.|++.+|++|+++++-+-|
T Consensus 15 tf~gi~~~LdYLk~LGV--taIwLsPi~~~~~gs~hGYdv~Dy~~Idp-~lGt~edfk~LV~aaH~~GIkVIlDvV~ 88 (720)
T 1iv8_A 15 NFGDVIDNLWYFXDLGV--SHLYLSPVLMASPGSNHGYDVIDHSRIND-ELGGEKEYRRLIETAHTIGLGIIQDIVP 88 (720)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEEECTTCSSCCSEEEEEEECT-TTTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHhCCC--CEEEECCcccCCCCCCCCCCCccCCCcCc-cCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 55778888888888887 77887643321 11 23 35554 454 3689999999999999998776
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=90.96 E-value=0.46 Score=49.89 Aligned_cols=88 Identities=11% Similarity=0.059 Sum_probs=54.8
Q ss_pred hHHHHHHHHHC-CCEEEeeeCC-ccccCCCcc---ccccccccceeee-cC-CCCceeeeecCCCccCCCCCChHHHHHH
Q 020492 62 PKSLAADLHLN-GFKAIWMLDP-GIKHEDGYF---VYDSGSKIDVWIQ-KA-DGTPFIGEVWPGPCVFPDYTQSKVRSWW 134 (325)
Q Consensus 62 ~~~~~~~L~~~-G~k~~~~~~P-~i~~~~~~~---~~~~~~~~~~~~~-~~-~g~~~~~~~w~g~~~~~Df~~p~a~~w~ 134 (325)
+++||+.+|++ |++||+-+.+ +........ .++ .....+|.. ++ +|.. ..+.+ ..-+++.||+++++.
T Consensus 584 fk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d-~~~p~yy~~~~p~~g~~---~~~tg-~~dln~~~p~Vr~~i 658 (1083)
T 2fhf_A 584 FRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLD-KIVPWYYQRLNETTGSV---ESATC-CSDSAPEHRMFAKLI 658 (1083)
T ss_dssp HHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHH-HHSTTTSBCBCTTTCCB---CCTTS-SEEBCTTSHHHHHHH
T ss_pred HHHHHHHHHhhcCCEEEEEeccccCcCCCccchhcccc-CCCCCceeecCCCCCce---ecCCc-cCCcCcCCHHHHHHH
Confidence 68999999998 9999997654 222211100 111 112234433 21 2322 11111 122578999999999
Q ss_pred HHHHHhhhh-CCccEEEecCC
Q 020492 135 GSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 135 ~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
.+.++..++ .|||||-+|..
T Consensus 659 ~d~l~~W~~e~gVDGfR~D~a 679 (1083)
T 2fhf_A 659 ADSLAVWTTDYKIDGFRFDLM 679 (1083)
T ss_dssp HHHHHHHHHHHCCCEEEETTG
T ss_pred HHHHHHHHHHhCCcEEEEeCc
Confidence 999988876 69999999975
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=89.11 E-value=0.36 Score=47.88 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------Cc--eee-eecCCCCC---ChHHHHHHHHHCCCEEEeeeCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------GF--RCF-TFDKERFP---DPKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------~~--~~f-~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P 82 (325)
+-+.+.+.++.+++.|| ++|++-+-+.. ++ .++ ..|+ +|- +++.|++.+|++|+++++-+.|
T Consensus 13 tf~~i~~~LdyL~~LGv--t~V~LsPi~e~~~~s~~GYd~~Dy~~vdp-~lGt~edfk~LV~~aH~~GI~VilDvV~ 86 (704)
T 3hje_A 13 KFSEIRNRLDYFVELGV--THLYLSPVLKARPGSTHGYDVVDYNTIND-ELGGEEEYIRLIDEAKSKGLGIIQDIVP 86 (704)
T ss_dssp CHHHHHTTHHHHHHHTC--SEEEECCCEEESTTCSSSCSEEEEEEECG-GGTHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCC--CEEEECCCccCCCCCCCCCCCcCCCCcCc-cCCCHHHHHHHHHHHHHCCCEEEEeecc
Confidence 55777888888888887 77887653321 11 222 4443 454 4789999999999999987765
|
| >3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* | Back alignment and structure |
|---|
Probab=88.50 E-value=3.1 Score=40.76 Aligned_cols=124 Identities=11% Similarity=0.058 Sum_probs=68.1
Q ss_pred HHHHHHHHHhcCCCceEEEEecccCCCc-eeeeec---CCCCCC----------hHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 22 VREICRTFREKGIPCDVIWMDIDYMDGF-RCFTFD---KERFPD----------PKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 22 v~~~~~~~~~~~iP~d~i~iD~~w~~~~-~~f~~d---~~~FPd----------~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
.++.++.+++..|.. +.. .+|+-.+ ..+--. ...++| .++.|+.+|+.|++.+.+.--+-..+
T Consensus 142 ~~~~i~~L~~yHIN~--~QF-YDW~yrHh~P~~~~~~~~~~W~D~~~R~i~~~tVk~yI~~ah~~gm~aM~YnmiYaA~~ 218 (643)
T 3vmn_A 142 YYRELEQMKNMNINS--YFF-YDVYKSATNPFPNVPKFDQSWNWWSHSQVETDAVKALVNRVHQTGAVAMLYNMILAQNA 218 (643)
T ss_dssp HHHHHHHHHHTTCCE--EEE-TTCCSBTTBCSCSSSEEECTTCTTTCCEEEHHHHHHHHHHHHHTTCEEEEEEESSEEET
T ss_pred hHHHHHHHHhcCcCe--EEe-eeecccccCcCCCCCccccccccccCCEehHHHHHHHHHHHHHcCchhhhhHhhhcccc
Confidence 467788888888752 332 2454211 001000 133443 48999999999999887643222211
Q ss_pred CCccccccccccce-eeecCC------CCc--eeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecC
Q 020492 88 DGYFVYDSGSKIDV-WIQKAD------GTP--FIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDM 153 (325)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~------g~~--~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~ 153 (325)
. +..+....+ ..++.+ +.+ |.-..+| ...+.|..+|+.|+++.+++...++ .|||||-+|.
T Consensus 219 ~----~~~g~~~~~~~y~~~~~~~g~~~~~~~~~~~g~p-~~~~~nP~np~wq~yI~~~~~dvv~~~dfDG~HiD~ 289 (643)
T 3vmn_A 219 N----ETAVLPDTEYIYNYETGGYGQNGQVMTYSIDDKP-LQYYYNPLSKSWQNYISNAMAQAMKNGGFDGWQGDT 289 (643)
T ss_dssp T----SCCSSCGGGBCEESSSBTTBSTTSBCEEEETTEE-EEEEBCTTCHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred C----cccCCcchhhhhccccccccccCccceeccCCCc-eEEEECCCCHHHHHHHHHHHHHHHHhCCCceEeecc
Confidence 1 111111111 111111 111 0000011 1356799999999999999987774 8999999974
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=87.62 E-value=3.9 Score=36.00 Aligned_cols=125 Identities=16% Similarity=0.151 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCceEEEEe---------cccCC--C-------------ceeeeecCCCCCChHHHHHHHH
Q 020492 15 SYDSDKRVREICRTFREKGIPCDVIWMD---------IDYMD--G-------------FRCFTFDKERFPDPKSLAADLH 70 (325)
Q Consensus 15 ~y~~~~~v~~~~~~~~~~~iP~d~i~iD---------~~w~~--~-------------~~~f~~d~~~FPd~~~~~~~L~ 70 (325)
.+.+.+.+++.++.++++|+.+==+|.- ..+.. . ......++..++.+..+++.++
T Consensus 32 ~~~~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~ 111 (387)
T 4awe_A 32 PFNDQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSAT 111 (387)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHH
Confidence 4568899999999999999874333320 00000 0 0011123345777899999999
Q ss_pred HCCCEEEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh----CCc
Q 020492 71 LNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY----NGV 146 (325)
Q Consensus 71 ~~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~----~Gv 146 (325)
+.|+++++-+...-....+...+. . +..+...-.-++++++++++.+.++.++. ...
T Consensus 112 ~~gi~v~~~~~~~~~~~~g~~~~~---------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~ 172 (387)
T 4awe_A 112 KTGIKLIVALTNNWADYGGMDVYT---------V----------NLGGKYHDDFYTVPKIKEAFKRYVKAMVTRYRDSEA 172 (387)
T ss_dssp HHTCEEEEECCBSSSTTCCHHHHH---------H----------HTTCCSTTHHHHCHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HcCCEEEEeecccccccCCCcccc---------c----------ccccccccccccCHHHHHHHHHHHHHHHhhcCCCcc
Confidence 999999986543221111100010 0 00001111235678888888888877663 222
Q ss_pred cEEEecCCCCCc
Q 020492 147 DGIWNDMNEPAV 158 (325)
Q Consensus 147 dg~~~D~~e~~~ 158 (325)
=-.|-..|||..
T Consensus 173 I~~w~l~NEp~~ 184 (387)
T 4awe_A 173 ILAWELANEARC 184 (387)
T ss_dssp EEEEESCBSCCS
T ss_pred eeEeccCCCCCC
Confidence 234667788853
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=86.26 E-value=4.7 Score=39.75 Aligned_cols=73 Identities=16% Similarity=0.061 Sum_probs=52.1
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccC---CCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccc
Q 020492 9 YHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYM---DGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIK 85 (325)
Q Consensus 9 ~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~ 85 (325)
+|.+|+ ..+...+.++.+++.|+.. |-+-..|. ...+.|+|+- --|+..+++.+++.|+++++..-|+|.
T Consensus 32 ~Hy~r~---p~~~W~d~l~kmKa~G~Nt--V~~yv~W~~hEP~~G~fdF~g--~~DL~~fl~~a~~~GL~ViLr~GPyi~ 104 (654)
T 3thd_A 32 IHYSRV---PRFYWKDRLLKMKMAGLNA--IQTYVPWNFHEPWPGQYQFSE--DHDVEYFLRLAHELGLLVILRPGPYIC 104 (654)
T ss_dssp CCGGGS---CGGGHHHHHHHHHHTTCSE--EEEECCHHHHCSBTTBCCCSG--GGCHHHHHHHHHHTTCEEEEECCSCCC
T ss_pred cccccC---CHHHHHHHHHHHHHcCCCE--EEEEechhhcCCCCCccCccc--hHHHHHHHHHHHHcCCEEEeccCCccc
Confidence 455554 3678899999999999864 44444552 1233343331 137999999999999999999999998
Q ss_pred cCC
Q 020492 86 HED 88 (325)
Q Consensus 86 ~~~ 88 (325)
.+-
T Consensus 105 aEw 107 (654)
T 3thd_A 105 AEW 107 (654)
T ss_dssp TTB
T ss_pred ccc
Confidence 764
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=85.90 E-value=3.2 Score=41.01 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEec-ccCCCceeeeecCCC--CCChHHHHHHHHHCCCEEEeeeCCccccCCCccccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDI-DYMDGFRCFTFDKER--FPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYD 94 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~-~w~~~~~~f~~d~~~--FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~~ 94 (325)
..+.+++.++.+++.|+ .++-+.. .|.. ....+.. |..++.+++.++++|+++++.+... .. +..-
T Consensus 12 ~~~~~~~dl~~mk~~G~--N~vR~~if~W~~----~eP~~g~~d~~~ld~~ld~a~~~Gi~vil~~~~~-~~----P~Wl 80 (645)
T 1kwg_A 12 PKERWKEDARRMREAGL--SHVRIGEFAWAL----LEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTA-TP----PKWL 80 (645)
T ss_dssp CHHHHHHHHHHHHHHTC--CEEEECTTCHHH----HCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTT-SC----CHHH
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEeeechhh----cCCCCCccChHHHHHHHHHHHHCCCEEEEeCCCC-CC----ChhH
Confidence 46788999999999997 4555542 3421 1111111 3346899999999999998865211 11 1111
Q ss_pred cccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh----C-CccEEEecCCCCCc
Q 020492 95 SGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY----N-GVDGIWNDMNEPAV 158 (325)
Q Consensus 95 ~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~----~-Gvdg~~~D~~e~~~ 158 (325)
.....+++..+.+|.+. ..|.....++++|..+++....++.+.+ . .|.+|-++ |||..
T Consensus 81 ~~~~P~~~~~~~~G~~~----~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~-NE~~~ 144 (645)
T 1kwg_A 81 VDRYPEILPVDREGRRR----RFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTD-NEYGC 144 (645)
T ss_dssp HHHCGGGSCBCTTSCBC----CSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECS-SSTTT
T ss_pred hhcCCceeeeCCCCcCc----ccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEec-CcCCC
Confidence 11223444445555431 1123334678899988888888777553 1 47777766 78753
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=82.82 E-value=13 Score=34.97 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhcCCCceEEEEecccCC-------CceeeeecCCC---CCC-hHHHHHHHHHCCCEEEeeeC---Ccccc
Q 020492 21 RVREICRTFREKGIPCDVIWMDIDYMD-------GFRCFTFDKER---FPD-PKSLAADLHLNGFKAIWMLD---PGIKH 86 (325)
Q Consensus 21 ~v~~~~~~~~~~~iP~d~i~iD~~w~~-------~~~~f~~d~~~---FPd-~~~~~~~L~~~G~k~~~~~~---P~i~~ 86 (325)
+..+.++.++++|+-. +++-..-.. ...+ |+... =-| .+++++.+++.|+|++++.+ +....
T Consensus 106 Dp~~Wa~~~k~AGaky--vvlTaKHHDGF~lwpSk~t~--~ns~~~~pkrDlv~El~~A~rk~Glk~GlY~S~~~dW~~p 181 (455)
T 2zxd_A 106 DPQEWADLFKKAGAKY--VIPTTKHHDGFCLWGTKYTD--FNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFT 181 (455)
T ss_dssp CHHHHHHHHHHTTCSE--EEEEEECTTCCBSSCCSSCS--CBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEECSCCGGGC
T ss_pred CHHHHHHHHHHhCCCE--EEEEeeccCCccccCCCCCC--CcccccCCCCChHHHHHHHHHHcCCeEEEEecCCccccCc
Confidence 3467788888899754 444322222 2222 22211 115 48999999999999999877 33111
Q ss_pred CCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCCC
Q 020492 87 EDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNEP 156 (325)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e~ 156 (325)
+ .+.. +.. ..|. . +-.+++..+.+..+++.|++ .|.|.+|+|...|
T Consensus 182 ~----~~~~---------~~~-~~y~-----~-----~~~~~~y~~~~~~Ql~ELlt~Y~pd~lWfDg~~~ 228 (455)
T 2zxd_A 182 T----EPIR---------YPE-DLSY-----I-----RPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWP 228 (455)
T ss_dssp C----SCCC---------SGG-GGGT-----C-----SCCSHHHHHHHHHHHHHHHHHHCCSEEEEESCCC
T ss_pred c----cccc---------ccc-cccc-----C-----CCccHHHHHHHHHHHHHHHhhcCCcEEEECCCCC
Confidence 0 0100 000 0000 0 11256778889999998885 7999999997543
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=82.71 E-value=3.6 Score=42.58 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=51.1
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHhcCCCceEEEEecccC---CCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccc
Q 020492 9 YHQCRWSYDSDKRVREICRTFREKGIPCDVIWMDIDYM---DGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIK 85 (325)
Q Consensus 9 ~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~ 85 (325)
+|..|+ .+.+...+.++.+++.|+..=.+. ..|. ...+.|+|+- .-|+..+++.+++.|+++++..-|+|.
T Consensus 27 ~hy~r~--p~~~~W~d~l~kmka~G~NtV~~y--vfW~~hEP~~G~fdF~g--~~dL~~fl~~a~e~Gl~ViLr~GPyi~ 100 (971)
T 1tg7_A 27 VHPYRL--PVASLYIDIFEKVKALGFNCVSFY--VDWALLEGNPGHYSAEG--IFDLQPFFDAAKEAGIYLLARPGPYIN 100 (971)
T ss_dssp CCGGGS--CCGGGHHHHHHHHHTTTCCEEEEE--CCHHHHCSBTTBCCCCG--GGCSHHHHHHHHHHTCEEEEECCSCCC
T ss_pred ECcccC--CchHHHHHHHHHHHHcCCCEEEEe--ccHHHhCCCCCeecccc--hHHHHHHHHHHHHcCCEEEEecCCccc
Confidence 444443 246778999999999998654443 3462 1223333321 237899999999999999999999998
Q ss_pred cCC
Q 020492 86 HED 88 (325)
Q Consensus 86 ~~~ 88 (325)
.+-
T Consensus 101 aE~ 103 (971)
T 1tg7_A 101 AEV 103 (971)
T ss_dssp TTB
T ss_pred cee
Confidence 754
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=81.25 E-value=6.6 Score=37.20 Aligned_cols=103 Identities=17% Similarity=0.331 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhcCCCceEEEEe--cc---cCCCceeeeecCCCCC----Ch-HHHHHHHHHCCCEEEeeeCCccccCCCc
Q 020492 21 RVREICRTFREKGIPCDVIWMD--ID---YMDGFRCFTFDKERFP----DP-KSLAADLHLNGFKAIWMLDPGIKHEDGY 90 (325)
Q Consensus 21 ~v~~~~~~~~~~~iP~d~i~iD--~~---w~~~~~~f~~d~~~FP----d~-~~~~~~L~~~G~k~~~~~~P~i~~~~~~ 90 (325)
+..+.++.++++|.-.-++..- ++ |-....+|+.-..-|. |+ +++++.+++.|+|++++.+|. +
T Consensus 55 d~~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~~----d-- 128 (469)
T 3eyp_A 55 DCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGPH----D-- 128 (469)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECSS----C--
T ss_pred CHHHHHHHHHHcCCCEEEEEEEeCCCccccCCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeChh----H--
Confidence 4577888899999865433321 12 2233444443222232 53 799999999999999998862 0
Q ss_pred cccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CC-ccEEEecCCC
Q 020492 91 FVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NG-VDGIWNDMNE 155 (325)
Q Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~G-vdg~~~D~~e 155 (325)
-+.. . .+|+..++-.+++..+++.|+. .| |+.+|+|...
T Consensus 129 -w~~~-----------~--------------~~~y~~~~Y~~~~~~Ql~ELlt~Yg~i~~lW~Dg~~ 169 (469)
T 3eyp_A 129 -RHEH-----------L--------------SPLYTTERYKEYYAHQLGELMSDYGKIWETWWDGAG 169 (469)
T ss_dssp -HHHH-----------T--------------STTCCHHHHHHHHHHHHHHHHHSSCCCCEEECCCTT
T ss_pred -hCCC-----------c--------------CcccCcHHHHHHHHHHHHHHHhcCCcccEEEeCCCC
Confidence 0100 0 0234445556777888888774 56 7899999853
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=81.25 E-value=20 Score=33.94 Aligned_cols=101 Identities=14% Similarity=0.220 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhcCCCceEEEE---e--cccCCCceeeeecCCCCC----Ch-HHHHHHHHHCCCEEEeeeCCccccCCCc
Q 020492 21 RVREICRTFREKGIPCDVIWM---D--IDYMDGFRCFTFDKERFP----DP-KSLAADLHLNGFKAIWMLDPGIKHEDGY 90 (325)
Q Consensus 21 ~v~~~~~~~~~~~iP~d~i~i---D--~~w~~~~~~f~~d~~~FP----d~-~~~~~~L~~~G~k~~~~~~P~i~~~~~~ 90 (325)
+..+.++.++++|+-.=++.. | +-|-....+++.....|. |+ +++++.+++.|+|++++.+|. +-..
T Consensus 63 d~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~---d~~~ 139 (478)
T 3ues_A 63 DVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPW---DRTE 139 (478)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSC---CSSC
T ss_pred CHHHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChH---HhCC
Confidence 456778888899985433322 1 122233445554433342 53 799999999999999998763 1100
Q ss_pred cccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CC-ccEEEecCCC
Q 020492 91 FVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NG-VDGIWNDMNE 155 (325)
Q Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~G-vdg~~~D~~e 155 (325)
+.| + ..++-.+++..+++.|+. .| ++.+|+|...
T Consensus 140 ~~y--------------~-----------------~~~~y~~~~~~ql~EL~~~Yg~~~~~W~Dg~~ 175 (478)
T 3ues_A 140 ESY--------------G-----------------KGKAYDDFYVGQLTELLTQYGPIFSVWLDGAN 175 (478)
T ss_dssp TTT--------------T-----------------SSHHHHHHHHHHHHHHHHSSSCCSEEEECCCC
T ss_pred ccc--------------C-----------------chHHHHHHHHHHHHHHHhcCCcceEEEeeCCC
Confidence 011 0 124456788888888875 66 7899999864
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=81.03 E-value=9 Score=36.75 Aligned_cols=59 Identities=17% Similarity=0.181 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC---CC-ceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM---DG-FRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPG 83 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~~-~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~ 83 (325)
..+..++.++.+++.|+ +++-++..|. .. .+.|+ |...+.+++.+++.|+++++.+.++
T Consensus 27 ~~~~w~~dl~~mk~~Gl--n~Vr~~V~W~~iEP~g~G~yd-----f~~~d~~id~a~~~GL~viv~L~~h 89 (516)
T 1vem_A 27 NWETFENDLRWAKQNGF--YAITVDFWWGDMEKNGDQQFD-----FSYAQRFAQSVKNAGMKMIPIISTH 89 (516)
T ss_dssp CHHHHHHHHHHHHHTTE--EEEEEEEEHHHHTCSSTTCCC-----CHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEecchhhccCCCCCccc-----hHHHHHHHHHHHHCCCEEEEEeccc
Confidence 56788899999999996 7777777773 12 34443 3346899999999999999555553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 325 | ||||
| d2f2ha4 | 338 | c.1.8.13 (A:248-585) Putative glucosidase YicI, do | 1e-87 | |
| d1zy9a2 | 348 | c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata | 1e-21 |
| >d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Putative glucosidase YicI, domain 2 species: Escherichia coli [TaxId: 562]
Score = 264 bits (675), Expect = 1e-87
Identities = 70/313 (22%), Positives = 120/313 (38%), Gaps = 23/313 (7%)
Query: 1 MPPKWSLGYHQCRWSYDS--DKRVREICRTFREKGIPCDVIWMDIDYMDGFRC--FTFDK 56
+PP WS G + + V E+ +P V D +M F+ F +D
Sbjct: 16 LPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDP 75
Query: 57 ERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVW 116
FPDP+ + L G K ++P I + V+ + +++ DG+ + + W
Sbjct: 76 LTFPDPEGMIRRLKAKGLKICVWINPYIGQK--SPVFKELQEKGYLLKRPDGSLWQWDKW 133
Query: 117 PGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDD 176
D+T W+ +K + GVD D E D
Sbjct: 134 QPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPT---------------DV 178
Query: 177 EIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236
+ + HN Y + + +K ++ + R+ +G+Q++ W GD +
Sbjct: 179 QWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 238
Query: 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDA 296
N+E + S+ L +GLSG F DIGGF+ A ++ RW G + R H
Sbjct: 239 NYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH--GSK 296
Query: 297 IDHEPWSFGEEVL 309
PW++ +E
Sbjct: 297 SYRVPWAYDDESC 309
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Score = 91.8 bits (227), Expect = 1e-21
Identities = 32/259 (12%), Positives = 63/259 (24%), Gaps = 35/259 (13%)
Query: 12 CRW-SYDSDKRVREICRTFRE-KGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADL 69
C W Y D E + + K P +V +D Y + + FP + +A +
Sbjct: 11 CSWYHYFLDLTWEETLKNLKLAKNFPFEVFQIDDAYEKDIGDWLVTRGDFPSVEEMAKVI 70
Query: 70 HLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSK 129
NGF P E + +++ W D ++ +
Sbjct: 71 AENGFIPGIWTAPFSVSETSDVFNEHPDW---VVKENGEPKMAYRNWNKKIYALDLSKDE 127
Query: 130 VRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHN 189
V +W L G D K N +
Sbjct: 128 VLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKK-----------------NITPIQA 170
Query: 190 VYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATW--TGDNVSNWE-----HLH 242
+ E ++ A + + + + + D W +
Sbjct: 171 FRKGI------ETIRKAVGEDSFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIEDNGA 224
Query: 243 MSISMVLQLGLSGQPFSGP 261
+ L+ ++
Sbjct: 225 PAARWALRNAITRYFMHDR 243
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 325 | |||
| d2f2ha4 | 338 | Putative glucosidase YicI, domain 2 {Escherichia c | 100.0 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 99.91 | |
| d1szna2 | 314 | Melibiase {Trichoderma reesei [TaxId: 51453]} | 99.67 | |
| d1uasa2 | 273 | Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | 99.59 | |
| d1r46a2 | 292 | Melibiase {Human (Homo sapiens) [TaxId: 9606]} | 99.39 | |
| d1ktba2 | 293 | Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | 99.24 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 97.8 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 97.65 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 97.52 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 97.45 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 97.33 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 97.25 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 97.25 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 97.25 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 97.23 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 97.18 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 97.06 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 97.03 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 97.02 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 97.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 96.91 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 96.9 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 96.86 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 96.83 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 96.82 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 96.78 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 96.76 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 96.74 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 96.73 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 96.68 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 96.58 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 96.4 | |
| d2aama1 | 285 | Hypothetical protein TM1410 {Thermotoga maritima [ | 95.61 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 94.99 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 94.86 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 92.19 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 90.05 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 89.35 | |
| d1r7aa2 | 434 | Sucrose phosphorylase {Bifidobacterium adolescenti | 87.19 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 86.53 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 86.29 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 85.26 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 84.36 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 82.57 |
| >d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Putative glucosidase YicI, domain 2 species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4e-77 Score=554.12 Aligned_cols=300 Identities=23% Similarity=0.447 Sum_probs=276.4
Q ss_pred CCCccchhhhhhcCCCCC--HHHHHHHHHHHHhcCCCceEEEEecccCCCc--eeeeecCCCCCChHHHHHHHHHCCCEE
Q 020492 1 MPPKWSLGYHQCRWSYDS--DKRVREICRTFREKGIPCDVIWMDIDYMDGF--RCFTFDKERFPDPKSLAADLHLNGFKA 76 (325)
Q Consensus 1 lpP~walG~~~s~~~y~~--~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~--~~f~~d~~~FPd~~~~~~~L~~~G~k~ 76 (325)
|||+||||||+|+++|.+ +++|+++++++++++||||+|+||++|+++. ++|+||+++||||++|+++||++|+|+
T Consensus 16 lpP~walG~~~~~~~~~~~~~~~v~~~~~~~r~~~iP~d~i~iD~~w~~~~~~~~f~~d~~~FPdp~~~i~~l~~~G~~~ 95 (338)
T d2f2ha4 16 LPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKI 95 (338)
T ss_dssp CCCGGGGSEEEECCSSSCCCHHHHHHHHHHHHHTTCCCCEEEECGGGBCTTCCSSCCBCTTTCSCHHHHHHHHHHTTCEE
T ss_pred CCcHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCcceEEEcCchhcCCCcCceeeCcccCCCHHHHHHHHHHCCCeE
Confidence 799999999999998775 6679999999999999999999999999864 689999999999999999999999999
Q ss_pred EeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCC
Q 020492 77 IWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEP 156 (325)
Q Consensus 77 ~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~ 156 (325)
++|++|+|..++ ..|+++.++++++++++|+++.+.+|++..+++||+||+|++||.+.++.+++.||||+|+|++|+
T Consensus 96 ~l~~~P~i~~~~--~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~D~tnp~a~~w~~~~~~~~~~~Gidg~w~D~~e~ 173 (338)
T d2f2ha4 96 CVWINPYIGQKS--PVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGER 173 (338)
T ss_dssp EEEECSEECTTS--TTHHHHHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred EEeecCccCCCC--hhHHHHHhCCEEEECCCCCceeeecCCCCccccccCCHHHHHHHHHHhhcccccCCceEEecCCCC
Confidence 999999998766 478999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CccCCCCCCCCCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCCCCcceeeecCCCCC
Q 020492 157 AVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVS 236 (325)
Q Consensus 157 ~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G~qr~~~~w~GD~~s 236 (325)
..+ +..+.+ + ..+..+||+|+++++++++|++++..+.+|+++++||+++|+|||+++|+||+.+
T Consensus 174 ~~~---------d~~~~~-----~-~~~~~~~n~y~~~~~~~~~~~~~~~~~~~r~~~~~rs~~~Gsqry~~~W~GD~~s 238 (338)
T d2f2ha4 174 IPT---------DVQWFD-----G-SDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYA 238 (338)
T ss_dssp CCS---------SSBCTT-----C-CCHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCS
T ss_pred CCC---------cccccc-----C-cchhhhcchhHHHHHHHHHHHHHHhccccccceeeccccccccccceEecCCCCC
Confidence 432 222211 1 1356799999999999999999988778999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHccccCCCcccccCCCCCCCCChhHHHHHHHhhcccccccccCCCCCCCCCccccChhhHHHHHHHH
Q 020492 237 NWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVI 316 (325)
Q Consensus 237 ~W~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~eL~~RW~q~~af~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~ 316 (325)
+|++|+.+|+.+|++|++|+|++|+|||||.+++++|||+||+|+|+|+|+||+|+.. .+|+||.|++++++++|++|
T Consensus 239 ~w~~L~~~i~~~l~~~l~G~p~~g~DigGf~~~~~~EL~~RW~q~~~f~P~~r~h~~~--~~~~Pw~~~~~~~~~~r~~~ 316 (338)
T d2f2ha4 239 NYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFFT 316 (338)
T ss_dssp SHHHHHHHHHHHHHHHTTTCCCEEEETTCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCccCCCcCCCCCCCCHHHHHHHHHHHhcchheecCCCC--CCCCCccCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999975 57899999999999999999
Q ss_pred HHh
Q 020492 317 IAF 319 (325)
Q Consensus 317 ~~~ 319 (325)
+|.
T Consensus 317 ~lR 319 (338)
T d2f2ha4 317 QLK 319 (338)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=1.4e-23 Score=193.51 Aligned_cols=264 Identities=11% Similarity=0.081 Sum_probs=174.7
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCCCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCccccccc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMDGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSG 96 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~~~~ 96 (325)
-|+++|+++++.+++ +|+++|+||++|+.+.++|++|+++||+++.|++.||++|+|+++|+.|++....+ ..++
T Consensus 20 i~e~~i~~~a~~~~~--~g~~~i~iDdgW~~~~gd~~~d~~~FPglk~l~~~~h~~G~k~gl~~~p~~~~~~s-~~~~-- 94 (348)
T d1zy9a2 20 LTWEETLKNLKLAKN--FPFEVFQIDDAYEKDIGDWLVTRGDFPSVEEMAKVIAENGFIPGIWTAPFSVSETS-DVFN-- 94 (348)
T ss_dssp CCHHHHHHHHHHGGG--TTCSEEEECTTSEEETTEEEEECTTCCCHHHHHHHHHHTTCEEEEEECTTEEETTC-HHHH--
T ss_pred CCHHHHHHHHHHHHc--CCCcEEEECcccccCCCCceECcccCcCHHHHHHHHHhcCCEEEEEeeeccccCCc-HHHH--
Confidence 489999999999875 67899999999999999999999999999999999999999999999998765432 4555
Q ss_pred cccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCCCCccCCCC
Q 020492 97 SKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDD 176 (325)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~~~~~~~~~ 176 (325)
..+++..+...+.+..+.+|.+..+++|+++|++++|+.+.++.+.++|||++|+|++.... +|... ..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~~~~~Gvd~~K~D~~~~~~-------~~~~~-~~--- 163 (348)
T d1zy9a2 95 EHPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKMGYRYFKIDFLFAGA-------VPGER-KK--- 163 (348)
T ss_dssp HCGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHHTTCCEEEECCGGGGG-------CSSBC-SS---
T ss_pred hCccceeccCCCCccccccCCCCeeccCCCcHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcc-------CCccc-Cc---
Confidence 34566666666667778888888999999999999999999999999999999999986432 22110 00
Q ss_pred CCCcccccccccchhHHHHHHHHHHHH---HhhcCCCCcEEEEccccCCCCcceeee--cCCCCCCchH---------HH
Q 020492 177 EIGGCQNHSYYHNVYGMLMARSTYEGM---KLADKDKRPFVLTRAGFIGSQRYAATW--TGDNVSNWEH---------LH 242 (325)
Q Consensus 177 ~~~~~~~~~~~hn~y~~~~~~~~~e~~---~~~~~~~r~~~~srs~~~G~qr~~~~w--~GD~~s~W~~---------L~ 242 (325)
. +.. .++.+.++ ++.......+..+++-....+.|+..| ++|+...|+. .+
T Consensus 164 ------~----~~~-----~~~~~~~l~~~~~~~~~~~~~~~c~~p~~~~~~~~~~~Ris~Di~~~w~~~~~d~~~~~~~ 228 (348)
T d1zy9a2 164 ------N----ITP-----IQAFRKGIETIRKAVGEDSFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAAR 228 (348)
T ss_dssp ------S----CCH-----HHHHHHHHHHHHHHHCTTSEEEECSCBSGGGTTTCSEEECSSCCCSSCCTTSCSSSSSCHH
T ss_pred ------c----cHH-----HHHHHHHHHHHHhhhcCCeEEecCCCcccchhccCCeEEECCCccccccccCCCCccHHHH
Confidence 0 010 12222222 222222333444554333344555544 7888887754 34
Q ss_pred HHHHHHHHcc-ccCCCccc-ccCC----CCCCCCChhHHHHHHHhhcc-cccccccCCCCCCCCCccccChhhHHHHHHH
Q 020492 243 MSISMVLQLG-LSGQPFSG-PDIG----GFDGNATPRLFGRWMGIGAM-FPFCRGHTESDAIDHEPWSFGEEVLFCSSIV 315 (325)
Q Consensus 243 ~~i~~~l~~~-l~G~~~~g-~Dig----Gf~~~~~~eL~~RW~q~~af-~P~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~ 315 (325)
.++...+... ..|.-++. +|+. |..+....|--+.-.-.+++ .|++- .-..-..+++..+++|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~nDpD~l~l~~~~~~lt~~e~~~~~~l~a~~~~pl~~--------~~dl~~l~~~~~~llk~~ 300 (348)
T d1zy9a2 229 WALRNAITRYFMHDRFWLNDPDCLILREEKTDLTQKEKELYSYTCGVLDNMIIE--------SDDLSLVRDHGKKVLKET 300 (348)
T ss_dssp HHHHHHHHTGGGBTTTBEEECCCBCCCSSSCCCCHHHHHHHHHHHHHTTCCEEE--------CSCGGGCCHHHHHHHHHH
T ss_pred HHHHhhhhccccCCCccccCccceeecCCCCCCCHHHHHHHHHHHHHhccchhc--------cCCcccCCHHHHHHHHHH
Confidence 5555555433 23332222 3421 22222344433222222333 57763 224445678899999999
Q ss_pred HHHh
Q 020492 316 IIAF 319 (325)
Q Consensus 316 ~~~~ 319 (325)
+.++
T Consensus 301 ~~~~ 304 (348)
T d1zy9a2 301 LELL 304 (348)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 8876
|
| >d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Trichoderma reesei [TaxId: 51453]
Probab=99.67 E-value=8.2e-17 Score=145.14 Aligned_cols=265 Identities=11% Similarity=0.004 Sum_probs=151.9
Q ss_pred CCCCHHHHHHHHHHHHhcC---CCceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCcccc
Q 020492 15 SYDSDKRVREICRTFREKG---IPCDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKH 86 (325)
Q Consensus 15 ~y~~~~~v~~~~~~~~~~~---iP~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~ 86 (325)
..-|+++|++.++.+.+++ .|++.|+||++|+. ..++|++|+++||+ ++.+++.+|++|+|+++|+.|.+..
T Consensus 24 ~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~~G~~~~d~~kFP~Gl~~~~~~i~~~G~k~Giw~~p~~~~ 103 (314)
T d1szna2 24 CDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTAT 103 (314)
T ss_dssp TCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEESSSBC
T ss_pred ccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCCCCCeeeCHhhcCCchHHHHHHHHhcCCeEEEeecccccc
Confidence 3458999999999999876 47899999999985 36889999999999 7999999999999999999998755
Q ss_pred CCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCC
Q 020492 87 EDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTM 166 (325)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~ 166 (325)
...+ .+.+..... ...... ..-+|+++|+++.+.....+.+.+.|+|++|+|++.......
T Consensus 104 ~~~~--------p~~~~~~~~-~~~~~~-----~~~~d~~~~d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~----- 164 (314)
T d1szna2 104 CAGY--------PASLGYEDV-DAADFA-----DWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTAL----- 164 (314)
T ss_dssp TTSC--------BCCTTCHHH-HHHHHH-----HTTCCEEEEECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTT-----
T ss_pred cCCC--------ccccccccc-chhhhh-----hcCCccccchHHHHHHHHHHHHHHhCCceEEecccccchhcc-----
Confidence 4321 111111000 000000 112577777777776665556667899999999875432110
Q ss_pred CCCCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCC------CCcceee--ecCCCCCCc
Q 020492 167 PESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIG------SQRYAAT--WTGDNVSNW 238 (325)
Q Consensus 167 P~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G------~qr~~~~--w~GD~~s~W 238 (325)
+..... . .+......+. ....+..+++++. .+.++++.+.+.+ ...++.. .++|....|
T Consensus 165 --~~~~~~---~----~~~~~~~~~~-~~~~~~~~~l~~~---~~~~~i~~c~~~~~~~~~~~~~~~~~~R~s~D~~~~w 231 (314)
T d1szna2 165 --DPTLAP---P----GYDWSTSKSA-ERFGAMRNALAKQ---SHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNW 231 (314)
T ss_dssp --CTTBCC---T----TCCGGGSHHH-HHHHHHHHHHHTS---SSCCEEEECCTTGGGHHHHGGGTCSEEECSSCCCSSH
T ss_pred --CcccCc---c----ccCcchhhHH-HHHHHHHHHHHHh---CCCeEEEecCCCCCCchhhhhhcccceeecCCccccc
Confidence 000000 0 0011111111 1122344555543 3444444332211 2334443 378999999
Q ss_pred hHHHHHHHHHHHccccCCCcccc--cCC--CCCCCCChhHHHHHHHhhcc-cccccccCCCCCCCCCccccChhhHHHH-
Q 020492 239 EHLHMSISMVLQLGLSGQPFSGP--DIG--GFDGNATPRLFGRWMGIGAM-FPFCRGHTESDAIDHEPWSFGEEVLFCS- 312 (325)
Q Consensus 239 ~~L~~~i~~~l~~~l~G~~~~g~--Dig--Gf~~~~~~eL~~RW~q~~af-~P~~r~h~~~~~~~~~Pw~~~~~~~~~~- 312 (325)
+.+...+..........-++... |+. |..+....|.-++-.-.+++ .|++-. -++-..+++..+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl~a~~~~pl~~g--------~dl~~~~~~~~~ll~ 303 (314)
T d1szna2 232 GSVTRILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIG--------TDLAQLSQNNINLLK 303 (314)
T ss_dssp HHHHHHHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTTCCEEEC--------SCGGGCCHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHhcCCccCCchhcccCCCCCCHHHHHHHHHHHHHHhCchhcc--------CCcccCCHHHHHHhc
Confidence 99887766555433333333333 432 22222345554433222333 466531 23444566777777
Q ss_pred -HHHHHHh
Q 020492 313 -SIVIIAF 319 (325)
Q Consensus 313 -r~~~~~~ 319 (325)
+++|.+.
T Consensus 304 N~e~ia~n 311 (314)
T d1szna2 304 NKHLLAFN 311 (314)
T ss_dssp CHHHHHHH
T ss_pred CHHHHhhc
Confidence 7777664
|
| >d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=99.59 E-value=5e-14 Score=124.45 Aligned_cols=225 Identities=20% Similarity=0.187 Sum_probs=141.7
Q ss_pred CCHHHHHHHHHHHHhcCC---CceEEEEecccCCC----ceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 17 DSDKRVREICRTFREKGI---PCDVIWMDIDYMDG----FRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~~----~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
-|++.|++.++.+.+.++ +++.|+||++|+.. .++|..|+++||+ ++.+++.+|++|+|+++|+.|......
T Consensus 23 i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~g~~~~~~~~fP~Gl~~~~~~~~~~G~~~Glw~~~~~~~~~ 102 (273)
T d1uasa2 23 INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCS 102 (273)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCCCCCCCCcccCccccCCChHHHHHHHHhCCCeEEEecCCcccccC
Confidence 479999999999998764 57999999999863 6789999999997 899999999999999999998653321
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCCCCccCCCCCCCCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPE 168 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e~~~~~~~~~~~P~ 168 (325)
. ++|++..++....+.+.++|||++|+|++....
T Consensus 103 ~------------------------------------~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~~~---------- 136 (273)
T d1uasa2 103 N------------------------------------KMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAG---------- 136 (273)
T ss_dssp S------------------------------------SSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTT----------
T ss_pred C------------------------------------CCCcchhhHHHHHHHHHhCCCceeccccccccc----------
Confidence 1 122222334555666778999999999863210
Q ss_pred CCccCCCCCCCcccccccccchhHHHHHHHHHHHHHhhcCCCCcEEEEccccCC------CCcceeee--cCCCCCCchH
Q 020492 169 SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIG------SQRYAATW--TGDNVSNWEH 240 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~e~~~~~~~~~r~~~~srs~~~G------~qr~~~~w--~GD~~s~W~~ 240 (325)
+. ....| ....+++++. .|++++.-+...+ ..+|+..| ++|+...|+.
T Consensus 137 ---------------~~-~~~~~-----~~~~~~l~~~---~r~~~~~~~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~ 192 (273)
T d1uasa2 137 ---------------RS-VMERY-----TRMSNAMKTY---GKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGS 192 (273)
T ss_dssp ---------------CC-HHHHH-----HHHHHHHHHH---CTTSEEEEESTTTTCGGGTGGGTCSEEECSSCCCSSHHH
T ss_pred ---------------hH-HHHHH-----HHHHHHHHHh---CCCcEEeecccCCCcchhhhhhhhhhhcccCCcCcchhh
Confidence 00 01111 1233445443 3555555443222 23565544 7899999999
Q ss_pred HHHHHHHHHHccccCCCccccc----CCCCCCCCChhHHHHHHHhhcc-cccccccCCCCCCCCCccccChhhHHHH--H
Q 020492 241 LHMSISMVLQLGLSGQPFSGPD----IGGFDGNATPRLFGRWMGIGAM-FPFCRGHTESDAIDHEPWSFGEEVLFCS--S 313 (325)
Q Consensus 241 L~~~i~~~l~~~l~G~~~~g~D----igGf~~~~~~eL~~RW~q~~af-~P~~r~h~~~~~~~~~Pw~~~~~~~~~~--r 313 (325)
++..+..........-+..-+| +-|..+....|..+.-.-.+++ .|++-.. ++=..+++..+++ +
T Consensus 193 ~~~~~~~~~~~~~~~g~~~~~D~D~~~~~~~~~t~~E~rt~~al~~i~~~pL~i~~--------Dl~~l~~~~l~ll~N~ 264 (273)
T d1uasa2 193 MTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGC--------DVRSMSQQTKNILSNS 264 (273)
T ss_dssp HHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHTTCCEEECS--------CTTSCCHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHhCCCcccCccccccCCCCCCHHHHHHHHHHHHHHhchhhhcC--------CcccCCHHHHHHhcCH
Confidence 9988877776544332333333 2233333456665543222222 5776421 1112456777777 7
Q ss_pred HHHHHh
Q 020492 314 IVIIAF 319 (325)
Q Consensus 314 ~~~~~~ 319 (325)
++|.+.
T Consensus 265 e~IAin 270 (273)
T d1uasa2 265 EVIAVN 270 (273)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 777663
|
| >d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=5.3e-12 Score=112.08 Aligned_cols=101 Identities=23% Similarity=0.197 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHHhcCC---CceEEEEecccCCC----ceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCccccCC
Q 020492 17 DSDKRVREICRTFREKGI---PCDVIWMDIDYMDG----FRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKHED 88 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~~----~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~~~ 88 (325)
-+++.++++++.+.+.|+ +++.|+||++|+.. .++|+.|+++||+ ++.+++.+|++|+|+++|+.|.+....
T Consensus 33 i~E~~~~~~a~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~G~~~~~~~~FP~Gl~~l~~~i~~~G~~~Giw~~~~~~~~~ 112 (292)
T d1r46a2 33 ISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCA 112 (292)
T ss_dssp CSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred cCHHHHHHHHHHHHHccchhhCCeEEEEcCCcCCCCCCCCCCCccCcccccCccHHHHHHHHhcCceecccCCCccccCC
Confidence 368999999999998764 57999999999863 5789999999999 799999999999999999998654422
Q ss_pred CccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 89 GYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
++|++..++....+.+.++|||++|+|++
T Consensus 113 -------------------------------------~~p~~~~~~~~~~~~~~~~GvdyvK~D~~ 141 (292)
T d1r46a2 113 -------------------------------------GFPGSFGYYDIDAQTFADWGVDLLKFDGC 141 (292)
T ss_dssp -------------------------------------SSBCCTTTHHHHHHHHHHHTCCEEEEECC
T ss_pred -------------------------------------CCccHHHHHHHHHHHHHHcCCCeeccCCC
Confidence 12333345556667777899999999976
|
| >d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.24 E-value=3.6e-10 Score=99.91 Aligned_cols=69 Identities=28% Similarity=0.266 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHhcC---CCceEEEEecccCC----CceeeeecCCCCCC-hHHHHHHHHHCCCEEEeeeCCcccc
Q 020492 18 SDKRVREICRTFREKG---IPCDVIWMDIDYMD----GFRCFTFDKERFPD-PKSLAADLHLNGFKAIWMLDPGIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~---iP~d~i~iD~~w~~----~~~~f~~d~~~FPd-~~~~~~~L~~~G~k~~~~~~P~i~~ 86 (325)
+++.|++.++.+.+.| .+++.|+||++|+. ..++|..|+++||+ ++.+++.+|++|+|+++|+.|....
T Consensus 34 ~E~~i~~~a~~~~~~gl~~~G~~~v~iDDGW~~~~~d~~G~~~~~~~kFP~Gl~~l~d~i~~~Gl~~Giw~~~g~~~ 110 (293)
T d1ktba2 34 SEMLFMEMADRIAEDGWRELGYKYINIDDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLGIYGDLGRLT 110 (293)
T ss_dssp SHHHHHHHHHHHHHSSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTHHHHHHHHHHTTTCEEEEEEEBSSBC
T ss_pred hHHHHHHHHHHHHHCcchhcCCEEEEEcCCCcCCCCCCCCCEeeChhhcCCcHHHHHHHHHhcCCceEEEccccccc
Confidence 5899999999999876 57899999999986 46889999999999 8999999999999999999886543
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=97.80 E-value=0.00018 Score=63.53 Aligned_cols=131 Identities=17% Similarity=0.246 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecccCC--------------C--ceeeeecCCCCCC---hHHHHHHHHHCCCEEEee
Q 020492 19 DKRVREICRTFREKGIPCDVIWMDIDYMD--------------G--FRCFTFDKERFPD---PKSLAADLHLNGFKAIWM 79 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD~~w~~--------------~--~~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~ 79 (325)
-..|.+-++.+++.|| ++|||-+-+.. + ..+|+.|+ +|-. +++||+.+|++|++|++-
T Consensus 36 ~~~i~~kl~yl~~lGv--~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~-~~Gt~~df~~LV~~aH~~GI~VIlD 112 (357)
T d1gcya2 36 YNILRQQAATIAADGF--SAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNG-RYGSDAQLRQAASALGGAGVKVLYD 112 (357)
T ss_dssp HHHHHHHHHHHHHTTC--SEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCS-SSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCc-cCCCHHHHHHHHHHHHhcCCeEEEE
Confidence 3678888888888886 88998865532 1 12355543 5654 689999999999999998
Q ss_pred eCC-ccccCCCccccccccc--cceeee------cCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhh-hhCCccEE
Q 020492 80 LDP-GIKHEDGYFVYDSGSK--IDVWIQ------KADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF-IYNGVDGI 149 (325)
Q Consensus 80 ~~P-~i~~~~~~~~~~~~~~--~~~~~~------~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~-~~~Gvdg~ 149 (325)
+.+ +++.... .++.... .+.+.. +..........+.+...-+|+.||++++...+.++.+ .+.|||||
T Consensus 113 ~V~NH~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~v~~~~~~~~~~~~~~~giDGf 190 (357)
T d1gcya2 113 VVPNHMNRGYP--DKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGF 190 (357)
T ss_dssp ECCSBCCTTCS--SCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred EeccccCCCCC--ccccccccCCCccccccCCCCCCCCCCCccccccccccccCCCCHHHHHHHHHHHHHHHHhcCCCEE
Confidence 765 3333221 1111000 000000 0000111111222233347899999999988776654 46999999
Q ss_pred EecCC
Q 020492 150 WNDMN 154 (325)
Q Consensus 150 ~~D~~ 154 (325)
-+|..
T Consensus 191 R~Daa 195 (357)
T d1gcya2 191 RFDFV 195 (357)
T ss_dssp EESCG
T ss_pred EEeeh
Confidence 99975
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=97.65 E-value=5.5e-05 Score=68.80 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=79.1
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC--C----Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCCc-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM--D----GF--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDPG-I 84 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~--~----~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P~-i 84 (325)
+-+.|.+-++-+++.|| ++|+|-+-+. . ++ .+ +++|+ +|- +++++|+++|++|+||++-+.|. +
T Consensus 32 d~~g~~~~ldyl~~LGv--~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp-~~G~~~d~~~lv~~aH~~gi~VilD~V~NH~ 108 (420)
T d2bhua3 32 TYRAAAEKLPYLKELGV--TAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PYGRPEDLMALVDAAHRLGLGVFLDVVYNHF 108 (420)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEECCCEECSSSCCCSTTCCEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHhHHHHHHcCC--CEEEeCCCCcCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHhcccccccccccccc
Confidence 56777788888888886 7888764321 1 11 23 34543 454 46899999999999999987763 3
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~ 154 (325)
..+... +... .. ..+.....++-..-+|+.||+++++..+.++..+ +.|||||-+|..
T Consensus 109 ~~~~~~--~~~~-~~---------~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVDGfR~D~~ 167 (420)
T d2bhua3 109 GPSGNY--LSSY-AP---------SYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDAT 167 (420)
T ss_dssp CSSSCC--HHHH-CG---------GGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTG
T ss_pred CCCCcc--cccc-cc---------ccccccccccccccccccChHHHHHHHHHhheeeecccccEEEEeee
Confidence 332221 1110 11 1111111122233489999999999999999887 579999999964
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=97.52 E-value=9.6e-05 Score=65.69 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC---------------Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEE
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD---------------GF--RC-FTFDKERFP---DPKSLAADLHLNGFKA 76 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~---------------~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~ 76 (325)
+-+.|.+-++.++++|| ++|||-+=... ++ .+ +..|+ +|- ++++||+.+|++|+|+
T Consensus 15 ~f~~i~~~ldyl~~lGv--~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~-~~Gt~~df~~LV~~aH~~Gi~V 91 (344)
T d1ua7a2 15 SFNTLKHNMKDIHDAGY--TAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNR-YLGTEQEFKEMCAAAEEYGIKV 91 (344)
T ss_dssp CHHHHHHTHHHHHHTTC--SEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEET-TTEEHHHHHHHHHHHHTTTCEE
T ss_pred cHHHHHHhHHHHHHcCC--CEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCC-CCCCHHHHHHHHHHhcccceeE
Confidence 35668888888888887 88987543311 01 12 34443 564 4799999999999999
Q ss_pred EeeeCC-ccccCCCccccccc--cccceeeecCCC----Ccee--eeecCCCccCCCCCChHHHHHHHHHHHhhhhCCcc
Q 020492 77 IWMLDP-GIKHEDGYFVYDSG--SKIDVWIQKADG----TPFI--GEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVD 147 (325)
Q Consensus 77 ~~~~~P-~i~~~~~~~~~~~~--~~~~~~~~~~~g----~~~~--~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvd 147 (325)
++-+.| +++.+.. .+.+. ....++-.+.+. .... ...|.+ -.-+|+.||+++++..+.++.+++.|||
T Consensus 92 ilD~V~NH~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~Dln~~np~Vr~~l~~~~~~w~~~giD 168 (344)
T d1ua7a2 92 IVDAVINHTTFDYA--AISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLG-LYDWNTQNTQVQSYLKRFLERALNDGAD 168 (344)
T ss_dssp EEEECCSBCCSCTT--TSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTT-BCEECTTSHHHHHHHHHHHHHHHHTTCC
T ss_pred eeccceeeecCCCc--hhhccccCCcccccCCCCCCCCCCCcCcccCcccc-CCccccCChHHHHHHHHHHHHHHhcCCC
Confidence 998766 4443322 11110 011122111100 0000 011111 1115899999999999999998899999
Q ss_pred EEEecCC
Q 020492 148 GIWNDMN 154 (325)
Q Consensus 148 g~~~D~~ 154 (325)
||-+|..
T Consensus 169 GfR~Daa 175 (344)
T d1ua7a2 169 GFRFDAA 175 (344)
T ss_dssp EEEETTG
T ss_pred eEEEeee
Confidence 9999974
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=97.45 E-value=0.00058 Score=59.50 Aligned_cols=135 Identities=14% Similarity=0.109 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecccCC----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccccC
Q 020492 19 DKRVREICRTFREKGIPCDVIWMDIDYMD----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKHE 87 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~~ 87 (325)
-..|.+-++.+++.|| ++|+|-+-... ++ .+ +..|+.+|-+ +++||+++|++|++|++-+.| ++..+
T Consensus 20 ~~~i~~kLdyl~~lGv--~~i~L~Pi~~~~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~V~NH~~~~ 97 (347)
T d1ht6a2 20 YNMMMGKVDDIAAAGV--THVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHRCAD 97 (347)
T ss_dssp HHHHHTTHHHHHHTTC--CEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCS
T ss_pred HHHHHHhHHHHHHcCC--CEEEECCCCcCCCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeeccccccCCC
Confidence 4778888899988887 77888754421 11 22 4566667876 589999999999999998765 33322
Q ss_pred CCc-----cccccccccceeee------cC-----C-CCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEE
Q 020492 88 DGY-----FVYDSGSKIDVWIQ------KA-----D-GTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGI 149 (325)
Q Consensus 88 ~~~-----~~~~~~~~~~~~~~------~~-----~-g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~ 149 (325)
... ..+.......+... .. + ...+..........-+|+.||+++++..+.++.++ +.|||||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~n~~v~~~l~~~~~~wi~~~gvDGf 177 (347)
T d1ht6a2 98 YKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAW 177 (347)
T ss_dssp EECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred CcccccccccccCCCCCCCcCcCccccCCCcccccccccccccccccCCCCcccccchhhhhhhhhhhhhhcccCCcceE
Confidence 110 00100000000000 00 0 00000000011122368899999999999998887 5899999
Q ss_pred EecCCC
Q 020492 150 WNDMNE 155 (325)
Q Consensus 150 ~~D~~e 155 (325)
-+|...
T Consensus 178 R~D~~~ 183 (347)
T d1ht6a2 178 RLDFAR 183 (347)
T ss_dssp EETTGG
T ss_pred EEechh
Confidence 999764
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=97.33 E-value=0.00093 Score=61.17 Aligned_cols=134 Identities=17% Similarity=0.319 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----Cc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----GF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-..|.+-++-++++|| .+|+|-+-+.. ++ .+ +.+|+ +|-. +++||+.+|++|+||++-+.+ +++
T Consensus 29 d~~Gi~~kLdyLk~LGv--~~I~L~Pi~~~~~~~~GY~~~d~~~vd~-~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 105 (478)
T d1m53a2 29 DIRGIIEKLDYLKSLGI--DAIWINPHYDSPNTDNGYDISNYRQIMK-EYGTMEDFDSLVAEMKKRNMRLMIDVVINHTS 105 (478)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEECCCTTTTSSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHhhHHHHHcCC--CEEEECCCCCCCCCCCCcCccCCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEecccccccc
Confidence 45678888888999887 77877543321 11 12 34543 4554 689999999999999998765 333
Q ss_pred cCCCc---------------cccccccc------------cceeeecCC-CCceeeeecCCCccCCCCCChHHHHHHHHH
Q 020492 86 HEDGY---------------FVYDSGSK------------IDVWIQKAD-GTPFIGEVWPGPCVFPDYTQSKVRSWWGSL 137 (325)
Q Consensus 86 ~~~~~---------------~~~~~~~~------------~~~~~~~~~-g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~ 137 (325)
.+... ..+..+.. ......+.. +..+.. .......-+|+.+|++++.+.+.
T Consensus 106 ~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dln~~~~~V~~~i~~~ 184 (478)
T d1m53a2 106 DQHPWFIQSKSDKNNPYRDYYFWRDGKDNQPPNNYPSFFGGSAWQKDAKSGQYYLH-YFARQQPDLNWDNPKVREDLYAM 184 (478)
T ss_dssp TTSHHHHHHHHCTTCTTGGGBCEECCSSSSCSSCCBCTTSSBSEEECTTTCCEEEC-SSCTTCCBBCTTSHHHHHHHHHH
T ss_pred ccCchhhhcccCCCCCccccccccCCCcCCCCccccccCCCCccccccccCccccc-CcCCCCCcccchhHHHHHHHHHH
Confidence 21100 00000000 000001100 111100 00112234788999999999999
Q ss_pred HHhhhhCCccEEEecCCC
Q 020492 138 VKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 138 ~~~~~~~Gvdg~~~D~~e 155 (325)
++.+.+.|||||-+|...
T Consensus 185 ~~~w~e~gvDGfR~D~~~ 202 (478)
T d1m53a2 185 LRFWLDKGVSGMRFDTVA 202 (478)
T ss_dssp HHHHHTTTCCEEEETTGG
T ss_pred HHHHHhcCCceeccccce
Confidence 988888999999999753
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.25 E-value=0.0012 Score=59.07 Aligned_cols=62 Identities=13% Similarity=0.225 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------Cce--ee----------eecCCCCC---ChHHHHHHHHHCCCEE
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------GFR--CF----------TFDKERFP---DPKSLAADLHLNGFKA 76 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------~~~--~f----------~~d~~~FP---d~~~~~~~L~~~G~k~ 76 (325)
.-+.|.+-++.+++.|| ++|+|-+-+.. ++. ++ ..|+ +|- ++++||+.+|++|+||
T Consensus 22 ~~~~i~~kLdyLk~LGv--~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~-~~Gt~~df~~LV~~aH~~GIkV 98 (393)
T d1hvxa2 22 LWTKVANEANNLSSLGI--TALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRT-KYGTKAQYLQAIQAAHAAGMQV 98 (393)
T ss_dssp HHHHHHHHHHHHHHTTC--CEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSC-SSCCHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHHHHcCC--CEEEECCCCcCCCCCCCCCCccCccccccccccCCcCC-CCCCHHHHHHHHHHHHHCCCEE
Confidence 35789999999999987 88988754411 111 11 1222 343 4799999999999999
Q ss_pred EeeeCC
Q 020492 77 IWMLDP 82 (325)
Q Consensus 77 ~~~~~P 82 (325)
++-+.|
T Consensus 99 IlDvV~ 104 (393)
T d1hvxa2 99 YADVVF 104 (393)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 998765
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.25 E-value=0.0027 Score=56.41 Aligned_cols=135 Identities=19% Similarity=0.326 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
.+-+.|.+-++-+++.|| ++|+|-+-+.. + ..+ ++.|+ +|- ++++|++.+|++|+|+++-+.+ ++.
T Consensus 20 Gd~~gi~~kLdyl~~LGv--~~I~l~Pi~~~~~~~GY~~~d~~~vd~-~~Gt~~d~~~lv~~~h~~gi~VilD~V~NH~~ 96 (391)
T d1lwha2 20 GDFRGLKNAVSYLKELGI--DFVWLMPVFSSISFHGYDVVDFYSFKA-EYGSEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (391)
T ss_dssp CCHHHHHHTHHHHHHTTC--SEEEECCCEECSSSSCCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred cCHHHHHHhhHHHHHcCC--CEEEECCCCCCCCCCCCCccCCCCcCc-ccCCHHHHHHHHHHHHhcCCEEeecccccccc
Confidence 356777788888888776 88988653321 1 123 34554 555 4689999999999999997664 332
Q ss_pred cCCCc--------------ccccc-cc---------ccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhh
Q 020492 86 HEDGY--------------FVYDS-GS---------KIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDF 141 (325)
Q Consensus 86 ~~~~~--------------~~~~~-~~---------~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~ 141 (325)
.+... ..+.. .. ...++-...++..+. ..+.....-+|+.||++++...+.++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pdln~~n~~v~~~i~~~~~~w 175 (391)
T d1lwha2 97 FLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYR-GLFGPFSPDLNYDNPQVFDEMKRLVLHL 175 (391)
T ss_dssp TTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEECTTSCEEE-CTTCTTSCBBCTTSHHHHHHHHHHHHHH
T ss_pred cccccccccccCCccccccceecCCccccCccccCCCCccccccCCCcccc-cccCCcCCccccccchhhHHHHHHHHHH
Confidence 21100 00000 00 000011111111111 1111223347889999999999999988
Q ss_pred hhCCccEEEecCCC
Q 020492 142 IYNGVDGIWNDMNE 155 (325)
Q Consensus 142 ~~~Gvdg~~~D~~e 155 (325)
++.|||||-+|...
T Consensus 176 ~e~gvDGfR~Daa~ 189 (391)
T d1lwha2 176 LDMGVDGFRFDAAK 189 (391)
T ss_dssp HHHTCCEEEETTGG
T ss_pred hhcCCCcceechHH
Confidence 88999999999764
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=97.25 E-value=0.00079 Score=61.71 Aligned_cols=134 Identities=20% Similarity=0.269 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC---Cc----ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD---GF----RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-GIK 85 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~---~~----~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~i~ 85 (325)
+-..|.+-++-++++|| .+|+|-+-+.. .+ .+ +.+|+ +|- ++++||+.+|++|+||++-+.+ +++
T Consensus 29 d~~gi~~kLdYLk~LGv--~~I~l~Pi~~~~~~~~GY~~~d~~~vd~-~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 105 (479)
T d1uoka2 29 DLRGIISKLDYLKELGI--DVIWLSPVYESPNDDNGYDISDYCKIMN-EFGTMEDWDELLHEMHERNMKLMMDLVVNHTS 105 (479)
T ss_dssp CHHHHHTTHHHHHHHTC--CEEEECCCEECCCTTTTSSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHhhHHHHHcCC--CEEEECCCcCCCCCCCCcCccccCCcCc-ccCCHHHHHHHHHHHHHCCCEEEecccccccc
Confidence 45777777888888887 77887543311 11 12 34553 444 4689999999999999997764 333
Q ss_pred cCCCcc----ccccccccceeeecC--CCC------------cee---------eeecCCCccCCCCCChHHHHHHHHHH
Q 020492 86 HEDGYF----VYDSGSKIDVWIQKA--DGT------------PFI---------GEVWPGPCVFPDYTQSKVRSWWGSLV 138 (325)
Q Consensus 86 ~~~~~~----~~~~~~~~~~~~~~~--~g~------------~~~---------~~~w~g~~~~~Df~~p~a~~w~~~~~ 138 (325)
.+..++ ........++++..+ ++. ... ..+......-+|+.+|++++...+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~i~~~~ 185 (479)
T d1uoka2 106 DEHNWFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVYEMM 185 (479)
T ss_dssp TTSHHHHHHTTCTTCTTGGGBCEECCSSSSCSSCBBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTSHHHHHHHHHHH
T ss_pred cccchhhhhhhccCCccccceeccccccCcCcCCccccCCCCccccccccCcceecccCCCccccccCCHHHHHHHHHHH
Confidence 221100 000000111111100 000 000 00001123347889999999999999
Q ss_pred HhhhhCCccEEEecCC
Q 020492 139 KDFIYNGVDGIWNDMN 154 (325)
Q Consensus 139 ~~~~~~Gvdg~~~D~~ 154 (325)
+...+.|||||-+|..
T Consensus 186 ~~W~e~gvDGfR~D~~ 201 (479)
T d1uoka2 186 KFWLEKGIDGFRMDVI 201 (479)
T ss_dssp HHHHHTTCCEEEETTG
T ss_pred HHHHHcCCCCcccccc
Confidence 9888899999999965
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=97.23 E-value=0.0009 Score=59.83 Aligned_cols=135 Identities=23% Similarity=0.344 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccC------------CC--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEe
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYM------------DG--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIW 78 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~------------~~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~ 78 (325)
.+-+.|.+-++.+++.|| ++|+|-+=+. .+ ..+ +.+|+ +|.. +++||+.+|++|+++++
T Consensus 40 G~~~g~~~kLdyL~~LGv--~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~-~~Gt~~~~k~lv~~aH~~Gi~Vil 116 (381)
T d2aaaa2 40 GSWQGIIDHLDYIEGMGF--TAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNS-NFGTADNLKSLSDALHARGMYLMV 116 (381)
T ss_dssp CCHHHHHHTHHHHHTTTC--CEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCHHHHHHHHHHHHHcCC--CEEEeCCCccCCccCCCCCCCCccccccccccccc-ccCCHHHHHHHHHHHhhhhhcccc
Confidence 356778888888888885 7787654321 01 122 44554 5665 68999999999999999
Q ss_pred eeCC-ccccCCC-----cccccccccccee-----eecCCCCceeeeecCCC----ccCCCCCChHHHHHHHHHHHhhhh
Q 020492 79 MLDP-GIKHEDG-----YFVYDSGSKIDVW-----IQKADGTPFIGEVWPGP----CVFPDYTQSKVRSWWGSLVKDFIY 143 (325)
Q Consensus 79 ~~~P-~i~~~~~-----~~~~~~~~~~~~~-----~~~~~g~~~~~~~w~g~----~~~~Df~~p~a~~w~~~~~~~~~~ 143 (325)
-+.| ++..+.. +..+.......++ +.+-+.......+|.+. ..-+|+.||++++.+.+.+..++.
T Consensus 117 D~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~~~~ 196 (381)
T d2aaaa2 117 DVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVS 196 (381)
T ss_dssp EECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHHHHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCccccccccCCcccccccCCCccccccccccccCCCccCCccccCccccccchhhhhHHhhhhhhccc
Confidence 8776 3332211 1111111111111 00000000000111111 113688999999999998888774
Q ss_pred -CCccEEEecCC
Q 020492 144 -NGVDGIWNDMN 154 (325)
Q Consensus 144 -~Gvdg~~~D~~ 154 (325)
.|||||-+|..
T Consensus 197 ~~giDGfR~D~~ 208 (381)
T d2aaaa2 197 NYSVDGLRIDSV 208 (381)
T ss_dssp HHTCCEEEESCS
T ss_pred ceeeeeeeeccc
Confidence 79999999976
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=97.18 E-value=0.00087 Score=59.88 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC----CCc----ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCCc-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM----DGF----RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDPG-I 84 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~~~----~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P~-i 84 (325)
+-..|.+-++.+++.|+ .+|+|-+-+. .++ .+ +.+|+ +|-. +++||+.+|++|++|++-+.|. +
T Consensus 27 d~~gi~~~ldyi~~LGv--~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~-~~Gt~~dlk~lv~~~h~~gi~VilD~V~NH~ 103 (400)
T d1eh9a3 27 TFEGVIRKLDYLKDLGI--TAIEIMPIAQFPGKRDWGYDGVYLYAVQN-SYGGPEGFRKLVDEAHKKGLGVILDVVYNHV 103 (400)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEECCCBCCSSSCCCSTTCCCTTCBCS-TTCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred CHHHHHHHhHHHHHcCC--CEEEeCCcCcCCCCCCCCCCCCCCCCcCc-ccCCHHHHHHHHHHHHhcCCceeeecccccc
Confidence 56778888888888886 7888865432 111 23 24443 4543 6899999999999999987763 3
Q ss_pred ccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhh-hCCccEEEecCC
Q 020492 85 KHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~-~~Gvdg~~~D~~ 154 (325)
+.+..+ +.+ ...++.. ....+ +.....+.++.||++++++.+.++..+ +.|||||-+|..
T Consensus 104 s~~~~~--~~~--~~~~~~~-~~~~~-----~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gvDGfR~Daa 164 (400)
T d1eh9a3 104 GPEGNY--MVK--LGPYFSQ-KYKTP-----WGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLDAV 164 (400)
T ss_dssp CSSSCC--HHH--HSCCSCS-SCCCS-----SSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEEETTG
T ss_pred cCCCcc--hhh--hcccccc-ccccc-----cccccccccccccHHHHHHHHHHHHHHhhcccceEEeech
Confidence 333321 110 1111111 11011 111233567788999999999999877 579999999964
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=97.06 E-value=0.0032 Score=56.07 Aligned_cols=135 Identities=17% Similarity=0.294 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------------C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEee
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------------G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWM 79 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------------~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~ 79 (325)
+-+.|.+-++.++++|| ++|+|-+-+.. + ..+ +..|+ +|-. +++||+.+|++|+|+++-
T Consensus 41 d~~gi~~~Ldyl~~LGv--~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~-~~Gt~~dfk~lv~~~H~~Gi~VilD 117 (381)
T d2guya2 41 TWQGIIDKLDYIQGMGF--TAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNE-NYGTADDLKALSSALHERGMYLMVD 117 (381)
T ss_dssp CHHHHHHTHHHHHTTTC--CEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECT-TSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHhHHHHHHCCC--CEEEeCCCCCCCcccCCCCCCCCCccccccccccc-CCCCHHHHHHHHHHHHhhccceeee
Confidence 56778888888887765 77887542210 1 122 34444 5554 689999999999999998
Q ss_pred eCC-ccccCCC-----ccccccccccceeee-----cCCCCceeeeecCC----CccCCCCCChHHHHHHHHHHHhhh-h
Q 020492 80 LDP-GIKHEDG-----YFVYDSGSKIDVWIQ-----KADGTPFIGEVWPG----PCVFPDYTQSKVRSWWGSLVKDFI-Y 143 (325)
Q Consensus 80 ~~P-~i~~~~~-----~~~~~~~~~~~~~~~-----~~~g~~~~~~~w~g----~~~~~Df~~p~a~~w~~~~~~~~~-~ 143 (325)
+.+ +++.+.. +..+......+++-. +-+..+-...+|-+ ...-+|+.||++++.+.+.++.+. +
T Consensus 118 ~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~ 197 (381)
T d2guya2 118 VVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSN 197 (381)
T ss_dssp ECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHHHHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCcccccccccCCCCcccceeccccccccccccccceeeccCCccccchhccccHHHHHHHHHHhhhcccc
Confidence 765 2222111 111111111122111 00000000001100 122489999999999999888765 5
Q ss_pred CCccEEEecCCC
Q 020492 144 NGVDGIWNDMNE 155 (325)
Q Consensus 144 ~Gvdg~~~D~~e 155 (325)
.|||||-+|...
T Consensus 198 ~giDGfR~D~~~ 209 (381)
T d2guya2 198 YSIDGLRIDTVK 209 (381)
T ss_dssp HTCCEEEETTGG
T ss_pred ccccceeeehHh
Confidence 799999999864
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.03 E-value=0.0039 Score=55.13 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----C---ceeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----G---FRCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~---~~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
+-+.|.+-++.++++|| ++|+|-+=... + ..-+..|+ +|.. ++++|+.+|++|+++++-+.+ ++..
T Consensus 51 ~~~gi~~kldyl~~LGv--~~i~L~Pi~~~~~~~gy~~~d~~~vd~-~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~ 127 (382)
T d1j0ha3 51 DLQGIIDHLDYLVDLGI--TGIYLTPIFRSPSNHKYDTADYFEVDP-HFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGY 127 (382)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHhHHHHHHcCC--CEEEeCCCCcCCcccCCCcccccccCC-CCCCHHHHHHHHHHhhhccceEEEEeeeccccc
Confidence 55777788889988886 77887532210 1 12345554 6665 689999999999999997765 3332
Q ss_pred CCCccc-----cccccccceeeecCCC---Cce-eeeec--CCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 87 EDGYFV-----YDSGSKIDVWIQKADG---TPF-IGEVW--PGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 87 ~~~~~~-----~~~~~~~~~~~~~~~g---~~~-~~~~w--~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+..... .+.....+++...... .+. ....+ .....-+|+.||+++++..+.++.+++ .|||||-+|..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~ 207 (382)
T d1j0ha3 128 EFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVA 207 (382)
T ss_dssp TCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTG
T ss_pred ccccchhhhccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhhccccEEEecch
Confidence 211000 0001112222211100 000 00111 112335799999999999999998774 79999999986
Q ss_pred C
Q 020492 155 E 155 (325)
Q Consensus 155 e 155 (325)
.
T Consensus 208 ~ 208 (382)
T d1j0ha3 208 N 208 (382)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=97.02 E-value=0.00061 Score=60.79 Aligned_cols=133 Identities=12% Similarity=0.061 Sum_probs=71.5
Q ss_pred HHHHHHHHHH-HHhcCCCceEEEEecccC----------CCc--eeeeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC
Q 020492 19 DKRVREICRT-FREKGIPCDVIWMDIDYM----------DGF--RCFTFDKERFP---DPKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 19 ~~~v~~~~~~-~~~~~iP~d~i~iD~~w~----------~~~--~~f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P 82 (325)
-.+|.+-+.. ++++| +.+|+|-+--. .++ .+|.+|+ +|- ++++||+.+|++|+||++-+.+
T Consensus 21 ~~~i~~~~~~yl~~lG--~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~-~~Gt~~df~~LV~~aH~~GI~VilDvV~ 97 (378)
T d1jaea2 21 WNDIADECERFLQPQG--FGGVQISPPNEYLVADGRPWWERYQPVSYIINT-RSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (378)
T ss_dssp HHHHHHHHHHTTTTTT--EEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEE-TTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHhC--CCEEEeCcccccCCCCCCCCccccCCccceeCC-CCCCHHHHHHHHHHHHhcCceeeeeecc
Confidence 3456665654 45555 57787653211 111 2344443 454 4799999999999999997665
Q ss_pred -ccccCCCcc----ccccccc--cceeeecCC-CCceeeeecC----------CCccCCCCCChHHHHHHHHHHHhhhhC
Q 020492 83 -GIKHEDGYF----VYDSGSK--IDVWIQKAD-GTPFIGEVWP----------GPCVFPDYTQSKVRSWWGSLVKDFIYN 144 (325)
Q Consensus 83 -~i~~~~~~~----~~~~~~~--~~~~~~~~~-g~~~~~~~w~----------g~~~~~Df~~p~a~~w~~~~~~~~~~~ 144 (325)
++.....+. .++.... ........+ ........|. +.-.-+|+.||++++...+.++.+++.
T Consensus 98 NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dln~~np~V~~~l~~~~~~w~e~ 177 (378)
T d1jaea2 98 NHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDL 177 (378)
T ss_dssp SBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTSHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCccccccCCCcccCcCCCCCccccCCCCCcCCCCCccccccccccccCccccCCHHHHHHHHHHHHHHHHh
Confidence 332221100 0000000 000000000 0000000010 011226788999999999999988899
Q ss_pred CccEEEecCC
Q 020492 145 GVDGIWNDMN 154 (325)
Q Consensus 145 Gvdg~~~D~~ 154 (325)
|||||-+|..
T Consensus 178 gvDGfR~Daa 187 (378)
T d1jaea2 178 GVAGFRVDAA 187 (378)
T ss_dssp TCCEEEETTG
T ss_pred CCCceeeeee
Confidence 9999999975
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=97.00 E-value=0.0043 Score=55.60 Aligned_cols=133 Identities=14% Similarity=0.050 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC--------C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD--------G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~--------~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P 82 (325)
.+-..|.+-++.+++.|| ++|+|-+-+.. + ..+ +.+|+ +|-. +++||+.+|++|+||++-+.|
T Consensus 50 Gd~~Gl~~kLdyl~~LGv--~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~-~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 126 (422)
T d1h3ga3 50 GDIRGTIDHLDYIAGLGF--TQLWPTPLVENDAAAYSYHGYAATDHYRIDP-RYGSNEDFVRLSTEARKRGMGLIQDVVL 126 (422)
T ss_dssp CCHHHHHHTHHHHHHHTC--CEEEECCCEECCCSSCGGGCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCHHHHHHhHHHHHHCCC--CEEEeCCcccCCCCCCCCCCCCccccCCccc-ccCCHHHHHHHHHHHHHhCccccccCcc
Confidence 356778888889999887 88887653311 1 122 34555 5554 689999999999999998766
Q ss_pred -ccccCCCccccccccccceeeec-----------CCCCcee---------eeecCCCccCCCCCChHHHHHHHHHHHhh
Q 020492 83 -GIKHEDGYFVYDSGSKIDVWIQK-----------ADGTPFI---------GEVWPGPCVFPDYTQSKVRSWWGSLVKDF 141 (325)
Q Consensus 83 -~i~~~~~~~~~~~~~~~~~~~~~-----------~~g~~~~---------~~~w~g~~~~~Df~~p~a~~w~~~~~~~~ 141 (325)
++..+.. -+++....+++... ..+.++. ..+......-+|+.||++++...+.++.+
T Consensus 127 NH~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~~~~~~~~w 204 (422)
T d1h3ga3 127 SHIGKHHW--WMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWW 204 (422)
T ss_dssp SBCCTTSG--GGGSCSSTTSBSCCSSCCBCCCCGGGGSCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHH
T ss_pred ccccccch--hhccccccccccccccccccccccccccccccccCcccceeecccccCccccccccHHHHHHHhhhHHHH
Confidence 3332211 11111111111110 0000100 00111123347899999999999999988
Q ss_pred hh-CCccEEEecCC
Q 020492 142 IY-NGVDGIWNDMN 154 (325)
Q Consensus 142 ~~-~Gvdg~~~D~~ 154 (325)
++ .|||||-+|..
T Consensus 205 ~~~~gvDGfR~Da~ 218 (422)
T d1h3ga3 205 IEYAGLSGLRIDTY 218 (422)
T ss_dssp HHHHTCSEEEETTG
T ss_pred hhheeeeeeeeccc
Confidence 86 69999999975
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.91 E-value=0.0027 Score=56.85 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=29.0
Q ss_pred CCCCChHHHHHHHHHHHhhhhCCccEEEecCC
Q 020492 123 PDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 123 ~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+|+.||++++...+.++.+++.|||||-+|..
T Consensus 168 Ln~~np~Vr~~~~~~l~~~~~~GvdGfR~Da~ 199 (403)
T d1hx0a2 168 LALEKDYVRSMIADYLNKLIDIGVAGFRIDAS 199 (403)
T ss_dssp BCTTSHHHHHHHHHHHHHHHHHTCCEEEETTG
T ss_pred ccCCCHHHHHHHHHHHHHHHHcCCCccccccc
Confidence 67899999999999998888899999999975
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=96.90 E-value=0.0059 Score=53.87 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCCc-ccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDPG-IKH 86 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P~-i~~ 86 (325)
+-..|.+-++.++++|| ++|+|-+=+.. + ..+ +..|+ +|-. ++.+|+.+|++|+++++-+.+. +..
T Consensus 51 ~~~gi~~kLdyl~~lGi--~~I~l~Pv~~~~~~~gY~~~~~~~vd~-~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~ 127 (382)
T d1wzla3 51 DLKGVIDRLPYLEELGV--TALYFTPIFASPSHHKYDTADYLAIDP-QFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGD 127 (382)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCT
T ss_pred CHHHHHHhhHHHHHCCC--CEEEECCcCCCCcccCCcccccccccc-CCCCHHHHHHHHHHHHhcccceEeeeeeccccc
Confidence 56778888899999886 77887542211 1 122 34554 5554 6899999999999999976652 332
Q ss_pred CCCccccc-------cccccceeeecCCC----CceeeeecC---CCccCCCCCChHHHHHHHHHHHhhhhCCccEEEec
Q 020492 87 EDGYFVYD-------SGSKIDVWIQKADG----TPFIGEVWP---GPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWND 152 (325)
Q Consensus 87 ~~~~~~~~-------~~~~~~~~~~~~~g----~~~~~~~w~---g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D 152 (325)
+.. -+. .....+++...... .......+. ....-+|+.||++++...+.++..++.|||||-+|
T Consensus 128 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~gvDGfR~D 205 (382)
T d1wzla3 128 QFF--AFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRLD 205 (382)
T ss_dssp TSH--HHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEET
T ss_pred ccc--cccchhhcCccccccccccccccccccCCCCcccccccccccCCccCCCCHHHHHHHHHHHHHHHHcCCCceeec
Confidence 211 110 01122333322111 000001111 11223789999999999999988888999999999
Q ss_pred CCC
Q 020492 153 MNE 155 (325)
Q Consensus 153 ~~e 155 (325)
...
T Consensus 206 ~~~ 208 (382)
T d1wzla3 206 VAN 208 (382)
T ss_dssp TGG
T ss_pred chh
Confidence 764
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.0073 Score=52.78 Aligned_cols=129 Identities=16% Similarity=0.195 Sum_probs=74.5
Q ss_pred CHHHHHHH-HHHHHhcCCCceEEEEecccCC------Cc--ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCCc-
Q 020492 18 SDKRVREI-CRTFREKGIPCDVIWMDIDYMD------GF--RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDPG- 83 (325)
Q Consensus 18 ~~~~v~~~-~~~~~~~~iP~d~i~iD~~w~~------~~--~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P~- 83 (325)
+-+.|.+- ++-++++|+ ++|||-+=... ++ .+ +..|+ +|- +++++|+.+|++|+||++-+.+.
T Consensus 38 ~~~gi~~klidyl~~LGv--~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp-~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH 114 (396)
T d1m7xa3 38 SYRELADQLVPYAKWMGF--THLELLPINEHPFDGSWGYQPTGLYAPTR-RFGTRDDFRYFIDAAHAAGLNVILDWVPGH 114 (396)
T ss_dssp CHHHHHHHHHHHHHHTTC--SEEEESCCEECSCGGGTTSSCSEEEEECG-GGSCHHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEeCCCCCCCCCCCCCcCcCcCCCcCc-ccCCHHHHHHHHHHHhhhhhhhhhcccccc
Confidence 44555554 588888876 78887642211 11 12 34554 554 46999999999999999987663
Q ss_pred cccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 84 IKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
...+.. -+.......+.. ..+........| ....+++.+|+++.++.+.++.... .|+||+-+|..
T Consensus 115 ~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gvDG~R~D~~ 181 (396)
T d1m7xa3 115 FPTDDF--ALAEFDGTNLYE-HSDPREGYHQDW--NTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAV 181 (396)
T ss_dssp CCCSTT--SSTTGGGSCSSB-CC-------------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCS
T ss_pred cCCccc--ccccccCCcccc-ccCCCCCCCCCC--CCccccCCCchhHHHHHHHHHHHHHHhCCcceeeech
Confidence 332221 111111111111 111111111112 3345789999999999888876554 79999999864
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=96.83 E-value=0.0028 Score=55.71 Aligned_cols=134 Identities=13% Similarity=0.041 Sum_probs=73.4
Q ss_pred HHHHHHHHHH-HHhcCCCceEEEEecccC--------CCc--eeeeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC-c
Q 020492 19 DKRVREICRT-FREKGIPCDVIWMDIDYM--------DGF--RCFTFDKERFPD---PKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 19 ~~~v~~~~~~-~~~~~iP~d~i~iD~~w~--------~~~--~~f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
-++|.+-+.. +++.|| .+|+|-+-.. .++ .+|.+|+ +|-. +++||+.+|++|+||++-+.+ +
T Consensus 13 ~~~i~~~~~dyl~~lG~--tai~l~P~~~~~~~~~~y~gY~~~dy~vd~-~~Gt~~dfk~LV~~aH~~GI~VilDvV~NH 89 (354)
T d1g94a2 13 WQDVAQECEQYLGPKGY--AAVQVSPPNEHITGSQWWTRYQPVSYELQS-RGGNRAQFIDMVNRCSAAGVDIYVDTLINH 89 (354)
T ss_dssp HHHHHHHHHHTHHHHTC--CEEEECCCSCBBCSSSGGGGGSBSCSCSCB-TTBCHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHcCC--CEEEeCcCccCCCCCCCcccCCCCcceeCC-CCCCHHHHHHHHHHHhccCceeEEEeeccc
Confidence 3456554544 677886 7788754322 111 2355543 4654 689999999999999987654 3
Q ss_pred cccCCCc----cccccccccceeee--cCCCC----ceee------eecCCCccCCCCCChHHHHHHHHHHHhhhhCCcc
Q 020492 84 IKHEDGY----FVYDSGSKIDVWIQ--KADGT----PFIG------EVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVD 147 (325)
Q Consensus 84 i~~~~~~----~~~~~~~~~~~~~~--~~~g~----~~~~------~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvd 147 (325)
+...... ..+........... ...+. .+.. ..+-+...-+|+.||++++...+.++.+.+.|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dln~~n~~Vr~~l~d~~~~~~e~gvd 169 (354)
T d1g94a2 90 MAAGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQAIGVK 169 (354)
T ss_dssp ECSSCEEBTTSCEEBTTBCSSCCGGGBCCCCBCCTTHHHHCHHHHHHSBSTTCEEBCTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred cccccCCCcccccccccCCCcCCccccccCCCCCCccccccccceeccccCCCCccccCCHHHHHHHHHHHHHhhhhccc
Confidence 3222110 00000000000000 00000 0000 0000011237889999999999998888889999
Q ss_pred EEEecCCC
Q 020492 148 GIWNDMNE 155 (325)
Q Consensus 148 g~~~D~~e 155 (325)
|+-+|...
T Consensus 170 GfR~Da~~ 177 (354)
T d1g94a2 170 GFRFDASK 177 (354)
T ss_dssp EEEEETGG
T ss_pred hhhccchh
Confidence 99999753
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=96.82 E-value=0.0079 Score=52.94 Aligned_cols=136 Identities=15% Similarity=0.187 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccCC--Cce----e-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCCc-cc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYMD--GFR----C-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDPG-IK 85 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~--~~~----~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P~-i~ 85 (325)
.+-..|.+-++.+++.|| ++|+|-+=+.. +.+ + +..| .+|- ++++||+.+|++|+++++-+.+. ++
T Consensus 48 Gd~~gi~~kLdylk~LGv--~~i~l~Pi~~~~~~~gY~~~~~~~id-~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s 124 (382)
T d1ea9c3 48 GDLQGVIDHLDHLSKLGV--NAVYFTPLFKATTNHKYDTEDYFQID-PQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSG 124 (382)
T ss_dssp CCHHHHHHTHHHHHHHTC--SEEEECCCSSCSSSSTTSCSCTTCCC-TTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred cCHHHHHHhhHHHHhCCC--CEEEeCCCccCCCCCCCCcccccccc-cccCCHHHHHHHHHHHHhhcceEEEeeeccccc
Confidence 356778888888888886 78888654321 111 1 2333 3555 46899999999999999977652 33
Q ss_pred cCCCccc-----cccccccceeeec------CCCCc-eeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEec
Q 020492 86 HEDGYFV-----YDSGSKIDVWIQK------ADGTP-FIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWND 152 (325)
Q Consensus 86 ~~~~~~~-----~~~~~~~~~~~~~------~~g~~-~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D 152 (325)
.+..+.. .+.....+++... .++.. +..........-+|+.||++++...+.+..+++ .|||||-+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gvDGfR~D 204 (382)
T d1ea9c3 125 RTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLD 204 (382)
T ss_dssp TTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEET
T ss_pred ccCcchhhhhhcCCcccccccccccccccccccCcccccccccccccCccccccHHHHHHHHHHHhhcccceeeeEEEec
Confidence 2211000 0000011111111 11110 000011112334789999999999888887776 699999999
Q ss_pred CCC
Q 020492 153 MNE 155 (325)
Q Consensus 153 ~~e 155 (325)
...
T Consensus 205 a~~ 207 (382)
T d1ea9c3 205 VAN 207 (382)
T ss_dssp TCT
T ss_pred chh
Confidence 764
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=96.78 E-value=0.01 Score=52.99 Aligned_cols=135 Identities=19% Similarity=0.317 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC-------------CCc--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEe
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM-------------DGF--RC-FTFDKERFPD---PKSLAADLHLNGFKAIW 78 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~-------------~~~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~ 78 (325)
+-..|.+-++.+++.|| ++|+|-+=+. .++ .+ +.+|+ +|-. +++||+.+|++|+||++
T Consensus 50 d~~gi~~kLdyl~~LGv--~~I~L~Pi~~~~~~~~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~k~Lv~~~H~~Gi~Vil 126 (407)
T d1qhoa4 50 DLEGVRQKLPYLKQLGV--TTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEE-HFGNWTTFDTLVNDAHQNGIKVIV 126 (407)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCccccCCcccCCCCCCCCCceeeeecCCCCC-CCCCHHHHHHHHHHhhhcccceee
Confidence 55777888888999887 8888753221 011 23 34554 5654 68999999999999999
Q ss_pred eeCCc-cccCCC-cccccccc---ccceee----ecCCCCcee--ee--ecCCC---------------ccCCCCCChHH
Q 020492 79 MLDPG-IKHEDG-YFVYDSGS---KIDVWI----QKADGTPFI--GE--VWPGP---------------CVFPDYTQSKV 130 (325)
Q Consensus 79 ~~~P~-i~~~~~-~~~~~~~~---~~~~~~----~~~~g~~~~--~~--~w~g~---------------~~~~Df~~p~a 130 (325)
-+.+. ++.... ...+.+.. ....+. .+.....+. +. .|.+. ..-+|+.||++
T Consensus 127 D~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v 206 (407)
T d1qhoa4 127 DFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTI 206 (407)
T ss_dssp EECTTEEEEEBTTBTTSTTTTCEEETTEEEECSSSCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTTSHHH
T ss_pred ccccccccCCccccccccccCcccccCccccccccccccccccccCCCCCcccccccccccccCCccccCchhhhhhhhH
Confidence 76652 221110 00000000 000000 000000000 00 01100 11267899999
Q ss_pred HHHHHHHHHhhhhCCccEEEecCCC
Q 020492 131 RSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 131 ~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
++...+.++.+++.|||||-+|...
T Consensus 207 ~~~~~~~~~~w~~~gvDGfR~D~~~ 231 (407)
T d1qhoa4 207 AQYLTDAAVQLVAHGADGLRIDAVK 231 (407)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTGG
T ss_pred HHHHHHhHHHHhhhccccccccccc
Confidence 9999999999889999999999764
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=96.76 E-value=0.0048 Score=54.89 Aligned_cols=61 Identities=16% Similarity=0.347 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecccCC------Cce--e-e---------eecCCCCC---ChHHHHHHHHHCCCEEE
Q 020492 19 DKRVREICRTFREKGIPCDVIWMDIDYMD------GFR--C-F---------TFDKERFP---DPKSLAADLHLNGFKAI 77 (325)
Q Consensus 19 ~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------~~~--~-f---------~~d~~~FP---d~~~~~~~L~~~G~k~~ 77 (325)
-..|.+-++.++++|| ++|||-+=+.. ++. + + +.|+ +|- ++++||+.+|++|+||+
T Consensus 20 ~~~i~~kLdyL~~LGv--~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~-~~Gt~~df~~Lv~~aH~~GIkVi 96 (394)
T d2d3na2 20 WNRLNSDASNLKSKGI--TAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRT-KYGTRSQLQAAVTSLKNNGIQVY 96 (394)
T ss_dssp HHHHHHHHHHHHHHTC--CEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSB-TTBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHcCC--CEEEECcCccCCCCCCCCCCcccCcccccccccCCcCC-CCCCHHHHHHHHHHHHHCCCEEE
Confidence 4788999999999987 88988754421 111 1 1 2332 454 36899999999999999
Q ss_pred eeeCC
Q 020492 78 WMLDP 82 (325)
Q Consensus 78 ~~~~P 82 (325)
+-+.|
T Consensus 97 lDvV~ 101 (394)
T d2d3na2 97 GDVVM 101 (394)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 97765
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=96.74 E-value=0.0024 Score=58.26 Aligned_cols=131 Identities=12% Similarity=0.130 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC------------------Cc--ee-eeecCCCC----------CChHHHH
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD------------------GF--RC-FTFDKERF----------PDPKSLA 66 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~------------------~~--~~-f~~d~~~F----------Pd~~~~~ 66 (325)
+-+-|.+-++-++++|| ++|||-+=... ++ .+ +..|+ +| -++++||
T Consensus 41 d~~Gi~~kLdyl~~LGv--naiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~d~~~vdp-~y~~~~~~~Gt~~d~~~LV 117 (475)
T d1bf2a3 41 TYYGAGLKASYLASLGV--TAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDR-RYAYNKAAGGPTAEFQAMV 117 (475)
T ss_dssp SHHHHHHTHHHHHHHTC--CEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCG-GGCSCCSTTHHHHHHHHHH
T ss_pred CHHHHHhhhHHHHHcCC--CEEEeCCCCcCCCcccccccccccCcCCCCCCcccCCCcCc-ccccCCCCCCCHHHHHHHH
Confidence 55667788888888886 77988642210 11 12 23443 23 1379999
Q ss_pred HHHHHCCCEEEeeeCC-ccccCCCcccccccccc-ce----------eeecCCCCceeeeecCCCccCCCCCChHHHHHH
Q 020492 67 ADLHLNGFKAIWMLDP-GIKHEDGYFVYDSGSKI-DV----------WIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWW 134 (325)
Q Consensus 67 ~~L~~~G~k~~~~~~P-~i~~~~~~~~~~~~~~~-~~----------~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~ 134 (325)
+++|++|+||++-+.+ ++..+..+. ....+. ++ +.....|..+.. ...+...-+++.||++++++
T Consensus 118 ~~aH~~GIrVilD~V~NH~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dln~~np~V~~~~ 194 (475)
T d1bf2a3 118 QAFHNAGIKVYMDVVYNHTAEGGTWT--SSDPTTATIYSWRGLDNATYYELTSGNQYFY-DNTGIGANFNTYNTVAQNLI 194 (475)
T ss_dssp HHHHHTTCEEEEEECCSSCTTCSBSS--SSCSSCBBCSSHHHHHHHHHBCBCTTSSSBC-CSSSSSCCBCTTSHHHHHHH
T ss_pred HHHHhcCcEEEEEeccccccCCCccc--ccCCCcCccccccCcccccccccCCCccccc-cCCCccCccchhhhHHHHHH
Confidence 9999999999987654 343322111 100000 00 011112222111 01112223567899999999
Q ss_pred HHHHHhhhh-CCccEEEecCC
Q 020492 135 GSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 135 ~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
.+.++.+++ .|||||-+|..
T Consensus 195 ~~~~~~w~~~~gvDGfR~D~~ 215 (475)
T d1bf2a3 195 VDSLAYWANTMGVDGFRFDLA 215 (475)
T ss_dssp HHHHHHHHHTSCCCEEEETTG
T ss_pred HHHHHhhhhhcCCceEEEehH
Confidence 999988775 79999999965
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=96.73 E-value=0.0024 Score=56.76 Aligned_cols=136 Identities=18% Similarity=0.273 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHHh------cCCCceEEEEecccCC----C--cee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeC
Q 020492 18 SDKRVREICRTFRE------KGIPCDVIWMDIDYMD----G--FRC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLD 81 (325)
Q Consensus 18 ~~~~v~~~~~~~~~------~~iP~d~i~iD~~w~~----~--~~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~ 81 (325)
+-..|.+-++-++. +.+.+++|+|-+-+.. + ..+ +..|+ +|-. ++.||+.+|++|++|++-+.
T Consensus 25 d~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~-~~G~~~dlk~lv~~~H~~Gi~VilD~V 103 (409)
T d1wzaa2 25 DLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINP-DYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (409)
T ss_dssp CHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHhccccccccccHHhhcCccEEEECCCCCCCCCCCcCcccCCCcCc-ccCCHHHHHHHHHHHHhcCCEEEEecc
Confidence 44445554544421 3455688887532211 1 122 45655 4544 69999999999999999876
Q ss_pred Cc-cccCCCcc----ccccccccceeee-cC---------CC-C--------ceeeeecCCCccCCCCCChHHHHHHHHH
Q 020492 82 PG-IKHEDGYF----VYDSGSKIDVWIQ-KA---------DG-T--------PFIGEVWPGPCVFPDYTQSKVRSWWGSL 137 (325)
Q Consensus 82 P~-i~~~~~~~----~~~~~~~~~~~~~-~~---------~g-~--------~~~~~~w~g~~~~~Df~~p~a~~w~~~~ 137 (325)
+. +..+..+. ........+++.- .+ ++ . .+.+..| ....-+|+.||++++...+.
T Consensus 104 ~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dln~~n~~vr~~~~~~ 182 (409)
T d1wzaa2 104 INHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFW-SGMPDLNYNNPEVQEKVIGI 182 (409)
T ss_dssp CSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSC-TTSCBBCTTSHHHHHHHHHH
T ss_pred cccccccCcchhhhhccccccccccccccccccccCccccCCCccccccccccccccCC-CCCcccccccHHHHHHHHHH
Confidence 63 22221000 0000011111110 00 00 0 1111111 12234789999999999999
Q ss_pred HHhhhhCCccEEEecCCC
Q 020492 138 VKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 138 ~~~~~~~Gvdg~~~D~~e 155 (325)
++.+++.|||||-+|...
T Consensus 183 ~~~wi~~gVDGfR~D~~~ 200 (409)
T d1wzaa2 183 AKYWLKQGVDGFRLDGAM 200 (409)
T ss_dssp HHHHHHTTCCEEEEECCC
T ss_pred HHHHHHcCCCeecccchh
Confidence 999888999999999764
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=96.68 E-value=0.0076 Score=53.63 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=28.5
Q ss_pred CCCCChHHHHHHHHHHHhhhh-CCccEEEecCC
Q 020492 123 PDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMN 154 (325)
Q Consensus 123 ~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~ 154 (325)
+|+.||++++...+.++.+.+ .|||||-+|..
T Consensus 201 ln~~np~v~~~~~~~~~~w~~~~GiDGfR~Da~ 233 (393)
T d1e43a2 201 VDYDHPDVVAETKKWGIWYANELSLDGFRIDAA 233 (393)
T ss_dssp ECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTG
T ss_pred cccCChhhhHHHHHHHHhhhhhcCcceEEeecc
Confidence 588999999999999988875 69999999975
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=96.58 E-value=0.0037 Score=58.79 Aligned_cols=131 Identities=16% Similarity=0.072 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccCC-----Cc----ee-eeecCCCCC---ChHHHHHHHHHCCCEEEeeeCC-c
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYMD-----GF----RC-FTFDKERFP---DPKSLAADLHLNGFKAIWMLDP-G 83 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~~-----~~----~~-f~~d~~~FP---d~~~~~~~L~~~G~k~~~~~~P-~ 83 (325)
+-+-|.+-++-+++.|| .+|||-+-+.. +. .+ +.+|+ +|- |++++|+.+|++|+|+++-+.+ +
T Consensus 111 Dl~Gi~~kLdYLk~LGV--t~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp-~lGt~edl~~Lv~~aH~rGI~VilD~V~NH 187 (554)
T d1g5aa2 111 DLKGLKDKIPYFQELGL--TYLHLMPLFKCPEGKSDGGYAVSSYRDVNP-ALGTIGDLREVIAALHEAGISAVVDFIFNH 187 (554)
T ss_dssp SHHHHHTTHHHHHHHTC--SEEEECCCBCCCSSCSTTTTSCSCSSSBCT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHhhHHHHHcCC--CEEEECCCCCCCCCCCCCCcCcccCCCCCc-ccCCHHHHHHHHHHHHHCCCEEEEEECcCC
Confidence 56778888888888885 78888653321 11 12 23443 454 4689999999999999997655 2
Q ss_pred cccCCCcccccccc------ccceee---------------------------ecCCCCceeeeecCCCccCCCCCChHH
Q 020492 84 IKHEDGYFVYDSGS------KIDVWI---------------------------QKADGTPFIGEVWPGPCVFPDYTQSKV 130 (325)
Q Consensus 84 i~~~~~~~~~~~~~------~~~~~~---------------------------~~~~g~~~~~~~w~g~~~~~Df~~p~a 130 (325)
++.+..+ ++++. +..+++ ...++.. ..........-+|+.||++
T Consensus 188 ts~~h~w--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~dln~~np~V 264 (554)
T d1g5aa2 188 TSNEHEW--AQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRW-VWTTFNSFQWDLNYSNPWV 264 (554)
T ss_dssp EETTSHH--HHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCE-EECSSSTTEEEBCTTSHHH
T ss_pred CCCCccc--hhhhhccCCccccceEEcCCCCCCccccCCCcccCCCCCCcceeecCCCce-eecccCCcccccccCCHHH
Confidence 3221110 00000 001111 1111110 0000011123478999999
Q ss_pred HHHHHHHHHhhhhCCccEEEecCC
Q 020492 131 RSWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 131 ~~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
++...+.++.+.+.|||||-+|..
T Consensus 265 ~~~~~~~~~~w~~~gvDGfRlDa~ 288 (554)
T d1g5aa2 265 FRAMAGEMLFLANLGVDILRMDAV 288 (554)
T ss_dssp HHHHHHHHHHHHTTTCSEEEETTG
T ss_pred HHHHHhhhhhhhhccccccccccc
Confidence 999999999888999999999975
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=96.40 E-value=0.033 Score=49.31 Aligned_cols=133 Identities=15% Similarity=0.151 Sum_probs=74.8
Q ss_pred CHHHHHHHHH--HHHhcCCCceEEEEeccc------------------CC-Ccee-eeecCCCCCC---hHHHHHHHHHC
Q 020492 18 SDKRVREICR--TFREKGIPCDVIWMDIDY------------------MD-GFRC-FTFDKERFPD---PKSLAADLHLN 72 (325)
Q Consensus 18 ~~~~v~~~~~--~~~~~~iP~d~i~iD~~w------------------~~-~~~~-f~~d~~~FPd---~~~~~~~L~~~ 72 (325)
+-.-|.+-++ -++++|| ++|+|-+=+ .+ ...+ +..|+ +|-. +++||+++|++
T Consensus 53 dl~Gi~~kLd~~YLk~LGv--~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp-~~Gt~~dfk~LV~~aH~~ 129 (406)
T d3bmva4 53 DWQGIINKINDGYLTGMGV--TAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNP-YFGSFTDFQNLINTAHAH 129 (406)
T ss_dssp CHHHHHHHHHTSTTGGGTC--CEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHhcCHHHHHHcCC--CEEEECCcccccccccCCCCCCCChhhcCcccccccccCc-ccccHHHHHHHHHHHHhc
Confidence 4455666665 4566665 788874311 11 0123 34554 6665 68999999999
Q ss_pred CCEEEeeeCC-ccccCCCccccccccc------cceeeecCCC--C----ceeeeecC--------C--CccCCCCCChH
Q 020492 73 GFKAIWMLDP-GIKHEDGYFVYDSGSK------IDVWIQKADG--T----PFIGEVWP--------G--PCVFPDYTQSK 129 (325)
Q Consensus 73 G~k~~~~~~P-~i~~~~~~~~~~~~~~------~~~~~~~~~g--~----~~~~~~w~--------g--~~~~~Df~~p~ 129 (325)
|+||++-+.+ +.+.... .+....+ .+.+...... . .+.+..|. . ...-+++.+|+
T Consensus 130 Gi~VilD~V~NH~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~ 207 (406)
T d3bmva4 130 NIKVIIDFAPNHTSPASE--TDPTYAENGRLYDNGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNST 207 (406)
T ss_dssp TCEEEEEECTTEEEECCS--SCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHH
T ss_pred cccceeeeeccccccccc--chhhhcccCccccCCccccccccccccccccccCccccccccccccccccccccccccHH
Confidence 9999998765 3322211 0111111 1111111000 0 00010110 0 11236788999
Q ss_pred HHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 130 VRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 130 a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
++++..+.++.+.+.|||||-+|...
T Consensus 208 v~~~l~~~~~~~~~~giDGfR~D~~~ 233 (406)
T d3bmva4 208 IDSYLKSAIKVWLDMGIDGIRLDAVK 233 (406)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEESCGG
T ss_pred HHHHHHHHHHHHhhcCCCcccccccc
Confidence 99999999988888999999999753
|
| >d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: TM1410-like domain: Hypothetical protein TM1410 species: Thermotoga maritima [TaxId: 2336]
Probab=95.61 E-value=0.017 Score=49.30 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=64.4
Q ss_pred CCceEEEEecccCCCc-eeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCccc-cccc---cccceeeecCCC
Q 020492 34 IPCDVIWMDIDYMDGF-RCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFV-YDSG---SKIDVWIQKADG 108 (325)
Q Consensus 34 iP~d~i~iD~~w~~~~-~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~-~~~~---~~~~~~~~~~~g 108 (325)
-|.|.+++|.+..+.. ..|+ ++-|+.||+.|.+++-+++-.-.. ++.. ++.. ....++....
T Consensus 25 ~~~d~~ViD~~~~g~~~~~~t---------~~~i~~L~~~g~~viaYlsvGe~e--~~R~yw~~~~~~~~~~~~~~~~-- 91 (285)
T d2aama1 25 SGFEIAVIDYSKDGSESGEYS---------PEEIKIMVDAGVVPVAYVNIGQAE--DYRFYWKESWYTNTPEWLGEED-- 91 (285)
T ss_dssp SCCSEEEECSBSSSSGGGBCC---------HHHHHHHHHTTCEEEEEEESSEEE--TTSTTCCTHHHHSCCTTEEEEE--
T ss_pred cCCCEEEEcCCcCCCccccCC---------HHHHHHHHhCCCEEEEEEeccccc--ccccccchhhhcCCHHHhCCCC--
Confidence 4679999997653221 1122 467999999999988776532111 1111 1110 1122222111
Q ss_pred CceeeeecCCCccCCCCCChHHHHHHHHHHHhhhhCCccEEEecCCC
Q 020492 109 TPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNE 155 (325)
Q Consensus 109 ~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~~Gvdg~~~D~~e 155 (325)
..|+| ..++|+++|+-++...++++.+.+.|+||+-+|.-+
T Consensus 92 -----~~W~~-~~~vd~~~~~w~~il~~ri~~~~~~GfDGvflD~lD 132 (285)
T d2aama1 92 -----PAWPG-NYFVKYWYNEWKEIVFSYLDRVIDQGFKGIYLDRID 132 (285)
T ss_dssp -----TTEEE-EEEECTTSHHHHHHHHHHHHHHHHTTCSEEEEECTT
T ss_pred -----CCCCC-CeeEecCcHHHHHHHHHHHHHHHHcCCCeEEecccc
Confidence 12322 346899999999999999999999999999999654
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=94.99 E-value=0.17 Score=43.92 Aligned_cols=60 Identities=25% Similarity=0.391 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecccC--C-----Cce--ee----------eecCCCCCC---hHHHHHHHHHCCCEEE
Q 020492 20 KRVREICRTFREKGIPCDVIWMDIDYM--D-----GFR--CF----------TFDKERFPD---PKSLAADLHLNGFKAI 77 (325)
Q Consensus 20 ~~v~~~~~~~~~~~iP~d~i~iD~~w~--~-----~~~--~f----------~~d~~~FPd---~~~~~~~L~~~G~k~~ 77 (325)
..|.+-++.+++.|| ++|||-+-+. . ++. ++ +.|+ +|-+ +++||+.+|++|+||+
T Consensus 28 ~gi~~kLdylk~LGv--~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~-~~Gt~~d~~~LV~~aH~~GikVI 104 (361)
T d1mxga2 28 DHIRSKIPEWYEAGI--SAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVET-RFGSKEELVRLIQTAHAYGIKVI 104 (361)
T ss_dssp HHHHHHHHHHHHHTC--CEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSC-SSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCC--CEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCC-CCCCHHHHHHHHHHHHHCCCEEE
Confidence 688899999999987 7788876542 1 111 22 2332 5544 6899999999999999
Q ss_pred eeeCC
Q 020492 78 WMLDP 82 (325)
Q Consensus 78 ~~~~P 82 (325)
+-+.+
T Consensus 105 lD~V~ 109 (361)
T d1mxga2 105 ADVVI 109 (361)
T ss_dssp EEECC
T ss_pred EEeee
Confidence 97665
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=94.86 E-value=0.12 Score=44.44 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC----CCce----e-e---------eecCCCCCC---hHHHHHHHHHCCCEE
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM----DGFR----C-F---------TFDKERFPD---PKSLAADLHLNGFKA 76 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~~~~----~-f---------~~d~~~FPd---~~~~~~~L~~~G~k~ 76 (325)
+-..|.+-++.++++|| ++|+|-+-.. ..++ + | +.|+ +|.. +++||+.+|++|++|
T Consensus 21 ~~~~i~~kLdyLk~LGv--t~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~-~~Gt~~efk~lV~~~H~~GI~V 97 (390)
T d1ud2a2 21 HWNRLHDDAAALSDAGI--TAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRT-KYGTKAQLERAIGSLKSNDINV 97 (390)
T ss_dssp HHHHHHHHHHHHHHHTC--CEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSC-SSCCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCC-CCCCHHHHHHHHHHHHhcCCce
Confidence 35778888899999987 7788765431 1111 1 1 2232 4543 689999999999999
Q ss_pred EeeeCC
Q 020492 77 IWMLDP 82 (325)
Q Consensus 77 ~~~~~P 82 (325)
++-+.|
T Consensus 98 ilDvV~ 103 (390)
T d1ud2a2 98 YGDVVM 103 (390)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 998765
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=92.19 E-value=0.36 Score=43.82 Aligned_cols=88 Identities=8% Similarity=-0.073 Sum_probs=49.2
Q ss_pred hHHHHHHH-HHCCCEEEeeeCC-ccccCCCcccccccc----ccc-eeeecCCCCceeeeecCCCccCCCCCChHHHHHH
Q 020492 62 PKSLAADL-HLNGFKAIWMLDP-GIKHEDGYFVYDSGS----KID-VWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWW 134 (325)
Q Consensus 62 ~~~~~~~L-~~~G~k~~~~~~P-~i~~~~~~~~~~~~~----~~~-~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~ 134 (325)
+|+||+.+ |++|+||++-+.| +.+..... +.++. ... ++........ ...| +....++..+|.++.++
T Consensus 182 fk~lV~a~~H~rGIkVIlD~V~NHts~~h~w--f~~~~~~~~~~~~y~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ 256 (563)
T d2fhfa5 182 FRTMIQAIKQDLGMNVIMDVVYNHTNAAGPT--DRTSVLDKIVPWYYQRLNETTGS--VESA-TCCSDSAPEHRMFAKLI 256 (563)
T ss_dssp HHHHHHHHHHTSCCEEEEEECTTEESCCSSS--CTTCCHHHHSTTTSBCBCTTTCC--BCCT-TSSEEBCTTSHHHHHHH
T ss_pred HHHHHHHHhhccCceeeecCcccccCCCCCc--hhhcccCCCCCcceeccCCCCCc--ccCC-CCCcccCccchhHHHHH
Confidence 56777777 8889999987654 33322211 11110 011 1111111111 0111 11233678899999998
Q ss_pred HHHHHhhh-hCCccEEEecCC
Q 020492 135 GSLVKDFI-YNGVDGIWNDMN 154 (325)
Q Consensus 135 ~~~~~~~~-~~Gvdg~~~D~~ 154 (325)
.+...... +.|+||+-+|..
T Consensus 257 ~d~~~~~~~~~~~dg~r~D~~ 277 (563)
T d2fhfa5 257 ADSLAVWTTDYKIDGFRFDLM 277 (563)
T ss_dssp HHHHHHHHHHHCCCEEEETTG
T ss_pred HHhhHHHHhhhcccccchhhh
Confidence 88777655 589999999875
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=90.05 E-value=0.42 Score=40.17 Aligned_cols=126 Identities=13% Similarity=0.056 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEec-ccC---CCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccCCCcccc
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDI-DYM---DGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVY 93 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~-~w~---~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~ 93 (325)
..+..++-++.+++.|+ .++=+.. .|. ...+.|. |.....+++.++++|+++++.+.++..+.- +.
T Consensus 12 ~~~~~~~D~~~~~~~G~--n~vR~~i~~W~~iep~~G~~~-----~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w---~~ 81 (393)
T d1kwga2 12 PKERWKEDARRMREAGL--SHVRIGEFAWALLEPEPGRLE-----WGWLDEAIATLAAEGLKVVLGTPTATPPKW---LV 81 (393)
T ss_dssp CHHHHHHHHHHHHHHTC--CEEEECTTCHHHHCSBTTBCC-----CHHHHHHHHHHHTTTCEEEEECSTTSCCHH---HH
T ss_pred CHHHHHHHHHHHHHcCC--CEEEecccchhhcCCCCCccC-----HHHHHHHHHHHHHCCCEEEEEcCCCCCchh---hh
Confidence 46778888999999996 5676665 673 2223332 345689999999999999988876543210 11
Q ss_pred ccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh----CCccEEEecCCCCCcc
Q 020492 94 DSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY----NGVDGIWNDMNEPAVF 159 (325)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~----~Gvdg~~~D~~e~~~~ 159 (325)
+ ...+...++.+|... ..+.....++.+|+.++.+...++.+.. ...-..+.=.||+..+
T Consensus 82 ~--~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 82 D--RYPEILPVDREGRRR----RFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp H--HCGGGSCBCTTSCBC----CSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred c--cCcccccccCCCccc----ccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 1 112222233333221 1123455788999999988888776664 1222233344676543
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=89.35 E-value=0.57 Score=41.28 Aligned_cols=83 Identities=18% Similarity=0.248 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC---C-CceeeeecCCCCCChHHHHHHHHHCCCEE--EeeeC---------C
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM---D-GFRCFTFDKERFPDPKSLAADLHLNGFKA--IWMLD---------P 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~-~~~~f~~d~~~FPd~~~~~~~L~~~G~k~--~~~~~---------P 82 (325)
+.+.+++-++.+++.|+ +.|.+|.-|. . ..+.|+| ...+++++.+++.|+|+ ++.++ |
T Consensus 27 ~~~~~~~~L~~LK~aGV--~gV~vdVwWGivE~~~Pg~Ydw-----s~yd~l~~mv~~~GLKi~vvmsfH~cGgnvgd~~ 99 (417)
T d1vema2 27 NWETFENDLRWAKQNGF--YAITVDFWWGDMEKNGDQQFDF-----SYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDC 99 (417)
T ss_dssp CHHHHHHHHHHHHHTTE--EEEEEEEEHHHHTCSSTTCCCC-----HHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCC
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEeeeeeeeecCCCCccCc-----HHHHHHHHHHHHcCCeEEEEEEecccCCCCCCcc
Confidence 57888899999999986 8999997772 1 2333443 35789999999999986 44442 4
Q ss_pred ccccCCCccccccccccceeeecCCCC
Q 020492 83 GIKHEDGYFVYDSGSKIDVWIQKADGT 109 (325)
Q Consensus 83 ~i~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (325)
.|..+. -+.+...+++++.++..|.
T Consensus 100 ti~lP~--Wv~e~~~~pDi~~tDr~G~ 124 (417)
T d1vema2 100 NVPIPS--WVWNQKSDDSLYFKSETGT 124 (417)
T ss_dssp CBCCCG--GGGGGCSSSCSSEECTTCC
T ss_pred ccCCCH--HHHhcccCCCeeEEcCCCC
Confidence 444322 3444446778888888774
|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Sucrose phosphorylase species: Bifidobacterium adolescentis [TaxId: 1680]
Probab=87.19 E-value=2.1 Score=36.20 Aligned_cols=133 Identities=17% Similarity=0.110 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccC----CCce----e-eeecCCCCCChHHHHHHHHHCCCEEEeeeCC-cccc
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYM----DGFR----C-FTFDKERFPDPKSLAADLHLNGFKAIWMLDP-GIKH 86 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~~~~----~-f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P-~i~~ 86 (325)
.+-+-|.+-++-+++.|| ++|+|-+-+. .++| + +.+|+ +|-.++++ ++| .+|+|||+-+.+ +++.
T Consensus 17 Gdl~g~~~~Ldyl~~LGv--~~I~L~Pi~~~~~~~d~GY~~~Dy~~vdp-~~Gt~~d~-k~L-~rGi~VIlDvV~NHt~~ 91 (434)
T d1r7aa2 17 GTIKSMTDILRTRFDGVY--DGVHILPFFTPFDGADAGFDPIDHTKVDE-RLGSWDDV-AEL-SKTHNIMVDAIVNHMSW 91 (434)
T ss_dssp SSHHHHHHHHHHHSTTTC--CEEEECCCEECSSSSSTTSSCSEEEEECT-TTCCHHHH-HHH-HTTSEEEEEEECSEEET
T ss_pred CCHHHHHHHHHHHHHcCC--CEEEECCCCCCCCCCCCCcCcccccccCc-ccCCHHHH-HHH-HhCCeeeEEeccccccc
Confidence 456778888888877775 8899876552 1222 3 35665 67777665 444 579999987654 3322
Q ss_pred CCCccc-----cccccccceeee-------------------cCCCCcee--------eeecC---CCccCCCCCChHHH
Q 020492 87 EDGYFV-----YDSGSKIDVWIQ-------------------KADGTPFI--------GEVWP---GPCVFPDYTQSKVR 131 (325)
Q Consensus 87 ~~~~~~-----~~~~~~~~~~~~-------------------~~~g~~~~--------~~~w~---g~~~~~Df~~p~a~ 131 (325)
...++. .........+.. ...+.... ...|. ....-+|+.+|+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~~p~v~ 171 (434)
T d1r7aa2 92 ESKQFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDKGW 171 (434)
T ss_dssp TSHHHHHHHHHGGGSTTGGGBCBHHHHCTTCBCHHHHHTSCCSSSSCSEEEEEETTEEEEEECSSSTTEEEBCTTSHHHH
T ss_pred ccchhhhhhhccCCCcccccccccCCCCCCccccCCCCcccccCCcccccccccccccceeeeccccccchhcccchhhh
Confidence 110000 000000000000 00000000 01111 11234789999999
Q ss_pred HHHHHHHHhhhhCCccEEEecCC
Q 020492 132 SWWGSLVKDFIYNGVDGIWNDMN 154 (325)
Q Consensus 132 ~w~~~~~~~~~~~Gvdg~~~D~~ 154 (325)
+...+.++...+.|+||+-+|..
T Consensus 172 ~~~~~~~~~w~~~g~dg~r~d~~ 194 (434)
T d1r7aa2 172 EYLMSIFDQMAASHVSYIRLDAV 194 (434)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETG
T ss_pred hhhhhHhhhhhccCCcccccccc
Confidence 99999998888899999999975
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=86.53 E-value=4.8 Score=34.36 Aligned_cols=114 Identities=16% Similarity=0.102 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhcCCCceEEEE---e--cccCCCceeeeecCCCC-CC-hHHHHHHHHHCCCEEEeeeCCccccCCCcccc
Q 020492 21 RVREICRTFREKGIPCDVIWM---D--IDYMDGFRCFTFDKERF-PD-PKSLAADLHLNGFKAIWMLDPGIKHEDGYFVY 93 (325)
Q Consensus 21 ~v~~~~~~~~~~~iP~d~i~i---D--~~w~~~~~~f~~d~~~F-Pd-~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~ 93 (325)
+..+.|+.++++|+-.-++.. | +=|-+...+|+.-..-+ .| .+++++.+|+.|+|+++..++...-... .+
T Consensus 100 Da~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~G~YyS~~~dw~~~--~~ 177 (350)
T d1hl9a2 100 DPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFT--TE 177 (350)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEECEEECCSCCTTSC--CS
T ss_pred CHHHHHHHHHHcCCCEEEEEEEecCCcccCCCCCCCCCCcCCCCCCchHHHHHHHHHhcCCceeEEeccccccccc--cC
Confidence 357788889999986544332 1 11223334443211111 14 4899999999999999998864321110 00
Q ss_pred ccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh-CCccEEEecCCC
Q 020492 94 DSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY-NGVDGIWNDMNE 155 (325)
Q Consensus 94 ~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~-~Gvdg~~~D~~e 155 (325)
. ... +..........++-.+.+..+++.|++ .|.|.+|+|.+-
T Consensus 178 ~------------~~~-------~~~~~~~~~~~~~y~~~~~~Ql~EL~~~Y~p~~~w~D~~~ 221 (350)
T d1hl9a2 178 P------------IRY-------PEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGW 221 (350)
T ss_dssp C------------CCS-------GGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSCEEECSCC
T ss_pred C------------CCC-------cchhcccCccchHHHHHHHHHHHHHHhccCCceEEecccc
Confidence 0 000 001112333456677888889998885 789999999864
|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Streptomyces plicatus, endoglycosidase H [TaxId: 1922]
Probab=86.29 E-value=0.95 Score=37.44 Aligned_cols=61 Identities=16% Similarity=0.216 Sum_probs=42.2
Q ss_pred ChHHHHHHHHHCCCEEEeeeCCccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHh
Q 020492 61 DPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKD 140 (325)
Q Consensus 61 d~~~~~~~L~~~G~k~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~ 140 (325)
+....++.||++|+|+++.|- . |.+...+-++..++.++=+.+.+.+
T Consensus 66 ~~~~~i~~l~~~g~KvllsiG----G-----------------------------~~~~~~f~~~~s~~~~~~Fa~~~~~ 112 (265)
T d1edta_ 66 NAVTQIRPLQQQGIKVLLSVL----G-----------------------------NHQGAGFANFPSQQAASAFAKQLSD 112 (265)
T ss_dssp THHHHTHHHHHTTCEEEEEEE----E-----------------------------CTTSCCTTCCSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCEEEEEEc----c-----------------------------CcCCCCceecCCHHHHHHHHHHHHH
Confidence 345778889999999998742 1 1111223456678877767777776
Q ss_pred hh-hCCccEEEecCC
Q 020492 141 FI-YNGVDGIWNDMN 154 (325)
Q Consensus 141 ~~-~~Gvdg~~~D~~ 154 (325)
++ +.|+||+=+|.-
T Consensus 113 ~~~~~~~DGiDiD~E 127 (265)
T d1edta_ 113 AVAKYGLDGVDFDDE 127 (265)
T ss_dssp HHHHHTCCEEEEECS
T ss_pred HHHhcCCCceEeccc
Confidence 66 489999999984
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=85.26 E-value=1.6 Score=40.92 Aligned_cols=62 Identities=15% Similarity=0.196 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEecccC----CC--c--ee-eeecCCCCCC---hHHHHHHHHHCCCEEEeeeCC
Q 020492 18 SDKRVREICRTFREKGIPCDVIWMDIDYM----DG--F--RC-FTFDKERFPD---PKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 18 ~~~~v~~~~~~~~~~~iP~d~i~iD~~w~----~~--~--~~-f~~d~~~FPd---~~~~~~~L~~~G~k~~~~~~P 82 (325)
+=+.+.+.+.-+++.|| +.||+-+-.. +. | .| +.+|+ .|-+ ++.+++.+|++|+++++-+.|
T Consensus 15 tF~~~~~~LpYL~~LGV--s~IyLsPi~~a~~gS~HGYDv~D~~~Vdp-~lGt~edf~~LV~aaH~~Gm~VIlDiVp 88 (653)
T d1iv8a2 15 NFGDVIDNLWYFKDLGV--SHLYLSPVLMASPGSNHGYDVIDHSRIND-ELGGEKEYRRLIETAHTIGLGIIQDIVP 88 (653)
T ss_dssp CHHHHHHTHHHHHHHTC--CEEEECCCEEECTTCSSCCSEEEEEEECT-TTTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhhHHHHHCCC--CEEEECccCCCCCCCCCCccccCccccch-hcCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 56788899999999887 7888875332 11 1 23 24454 5653 689999999999999998766
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=84.36 E-value=4.2 Score=33.64 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEE------ecccC--------CCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCC
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWM------DIDYM--------DGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDP 82 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~i------D~~w~--------~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P 82 (325)
.+.+++++.++.+++.|+.+==+++ +..+. ...+...++++.+-.+..+++.+++.|+++++-++.
T Consensus 33 ~~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~ 112 (344)
T d1qnra_ 33 TNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCB
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccC
Confidence 3678899999999999975322221 11110 112345567777777899999999999999987664
Q ss_pred ccccCCCccccccccccceeeecCCCCceeeeecCCCccCCCCCChHHHHHHHHHHHhhhh----CCccEEEecCCCCC
Q 020492 83 GIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIY----NGVDGIWNDMNEPA 157 (325)
Q Consensus 83 ~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~w~g~~~~~Df~~p~a~~w~~~~~~~~~~----~Gvdg~~~D~~e~~ 157 (325)
..........+.. +.+......++++++++++.+.++.+.+ ...--.|-=.|||.
T Consensus 113 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~ 171 (344)
T d1qnra_ 113 NWSDYGGINAYVN--------------------AFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPR 171 (344)
T ss_dssp SSSTTSHHHHHHH--------------------HHCSCTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCC
T ss_pred Ccccccccccccc--------------------ccccccccccCCHHHHHHHHHHHHHHHHHhCCCCceeeeccCCccC
Confidence 3221111001100 0011112346788888887777776553 22212244456764
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=82.57 E-value=2.2 Score=36.45 Aligned_cols=67 Identities=15% Similarity=0.183 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhcCCCceEEEEecccC---CCceeeeecCCCCCChHHHHHHHHHCCCEEEeeeCCccccC
Q 020492 17 DSDKRVREICRTFREKGIPCDVIWMDIDYM---DGFRCFTFDKERFPDPKSLAADLHLNGFKAIWMLDPGIKHE 87 (325)
Q Consensus 17 ~~~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~~~~~f~~d~~~FPd~~~~~~~L~~~G~k~~~~~~P~i~~~ 87 (325)
.+.+..++.++.+++.|+.. |-+-..|. ...+.|+| +...|+..+++.++++|+++++...|++...
T Consensus 33 ~~~~~w~~~l~~mk~~G~n~--vr~~~~W~~~ep~~g~~df--~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~~ 102 (354)
T d1tg7a5 33 PVASLYIDIFEKVKALGFNC--VSFYVDWALLEGNPGHYSA--EGIFDLQPFFDAAKEAGIYLLARPGPYINAE 102 (354)
T ss_dssp CCGGGHHHHHHHHHTTTCCE--EEEECCHHHHCSBTTBCCC--CGGGCSHHHHHHHHHHTCEEEEECCSCCCTT
T ss_pred CCHHHHHHHHHHHHHcCCCE--EEEecchhccCCCCCcccc--cchhhHHHHHHHHHHcCCEEEEcCCCCcCcc
Confidence 35567889999999999854 44433452 11233322 1244789999999999999999888887653
|