Citrus Sinensis ID: 020511

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MEGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN
ccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHHcccccccccccccccHHHccccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccccHcccccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccHEccccccc
MEGAFAVLVLFVAMAVTSVhcqagtrvgfysrscpraesIVKSTVQAhfrsdptvapgllrmhfhdcfvhgcdasilingpntektappnrllrgydviddaKSQIEAACPGIVSCADILALAARDSVVVTrgiswqvptgrrdgrislasdtanlpgftESVEAQKQKFldkglntqDLVTLVGAHTIGTTACQIFKYRLynfttttatgadptidatfipqlralcpengdgarrvaldtgspnrfdtsffsnlrngrgvlesdqklwsDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKmsnigvktgtdgEIRKICSAIN
MEGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILIngpntektappnrLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVvtrgiswqvptgrrdgrisLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALdtgspnrfdTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFnvefgrsmvkmsnigvktgtdgeiRKICSAIN
MEGafavlvlfvamavTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFttttatgadptidatFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN
***AFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNT*****PNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISL******************QKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVAL*******FDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKI*****
***AFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRA*CP***D*ARRVALDTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN
MEGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN
*EGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKT*P**RLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICS***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query325 2.2.26 [Sep-21-2011]
Q9XIV8330 Peroxidase N1 OS=Nicotian N/A no 0.981 0.966 0.736 1e-139
P22196330 Cationic peroxidase 2 OS= N/A no 0.990 0.975 0.699 1e-133
O80822328 Peroxidase 25 OS=Arabidop yes no 0.978 0.969 0.611 1e-118
Q43387328 Peroxidase 71 OS=Arabidop no no 0.969 0.960 0.606 1e-115
Q9FKA4319 Peroxidase 62 OS=Arabidop no no 0.963 0.981 0.613 1e-112
Q9FMI7330 Peroxidase 70 OS=Arabidop no no 0.987 0.972 0.536 4e-99
Q96511331 Peroxidase 69 OS=Arabidop no no 0.901 0.885 0.585 1e-94
Q9SZH2326 Peroxidase 43 OS=Arabidop no no 0.975 0.972 0.464 9e-82
Q43729313 Peroxidase 57 OS=Arabidop no no 0.953 0.990 0.474 2e-74
O49293319 Peroxidase 13 OS=Arabidop no no 0.916 0.934 0.472 6e-74
>sp|Q9XIV8|PERN1_TOBAC Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1 Back     alignment and function desciption
 Score =  494 bits (1271), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 237/322 (73%), Positives = 276/322 (85%), Gaps = 3/322 (0%)

Query: 4   AFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMH 63
           A  +++L +A+ VT V  Q GTRVGFYS +CPRAESIV+STV+AHF+SDPTVAPG+LRMH
Sbjct: 12  AMFMVILVLAIDVTMVLGQ-GTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMH 70

Query: 64  FHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALA 123
           FHDCFV GCD SILI G + E+TA PNR L+G+DVI+DAK+QIEA CPG+VSCADILALA
Sbjct: 71  FHDCFVLGCDGSILIEGSDAERTAIPNRNLKGFDVIEDAKTQIEAICPGVVSCADILALA 130

Query: 124 ARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTL 183
           ARDSVV TRG++W VPTGRRDGR+S A+D  +LP F +SV+ QK+KFL KGLNTQDLV L
Sbjct: 131 ARDSVVATRGLTWSVPTGRRDGRVSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVAL 190

Query: 184 VGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTG 243
            GAHTIGT  C + + RL+NF +T   G DP+IDATF+PQLRALCP+NGD +RRV LDTG
Sbjct: 191 TGAHTIGTAGCAVIRDRLFNFNST--GGPDPSIDATFLPQLRALCPQNGDASRRVGLDTG 248

Query: 244 SPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVK 303
           S N FDTS+FSNLRNGRGVLESDQKLW+DAST+  VQRFLG+RGLLGLTF VEFGRSMVK
Sbjct: 249 SVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLTFGVEFGRSMVK 308

Query: 304 MSNIGVKTGTDGEIRKICSAIN 325
           MSNI VKTGT+GEIRK+CSAIN
Sbjct: 309 MSNIEVKTGTNGEIRKVCSAIN 330
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue. Can use NADH, NADPH and monolignols as substrates.
Nicotiana tabacum (taxid: 4097)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description
>sp|O80822|PER25_ARATH Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|Q9FKA4|PER62_ARATH Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1 Back     alignment and function description
>sp|Q9FMI7|PER70_ARATH Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1 Back     alignment and function description
>sp|Q96511|PER69_ARATH Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1 Back     alignment and function description
>sp|Q9SZH2|PER43_ARATH Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2 Back     alignment and function description
>sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1 Back     alignment and function description
>sp|O49293|PER13_ARATH Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
225447881324 PREDICTED: peroxidase N1 [Vitis vinifera 0.996 1.0 0.763 1e-147
147779371324 hypothetical protein VITISV_020254 [Viti 0.996 1.0 0.763 1e-147
19698452328 bacterial-induced class III peroxidase [ 0.975 0.966 0.774 1e-146
225447879328 PREDICTED: cationic peroxidase 2-like [V 0.978 0.969 0.755 1e-144
345104339327 bacterial-induced peroxidase [Gossypium 0.975 0.969 0.760 1e-144
359485970311 PREDICTED: peroxidase N1-like [Vitis vin 0.956 1.0 0.769 1e-144
324984185327 bacterial-induced peroxidase [Gossypium 0.975 0.969 0.757 1e-144
359485923324 PREDICTED: peroxidase N1-like [Vitis vin 0.929 0.932 0.791 1e-144
147861260311 hypothetical protein VITISV_024915 [Viti 0.956 1.0 0.772 1e-144
345104347327 bacterial-induced peroxidase [Gossypium 0.975 0.969 0.753 1e-143
>gi|225447881|ref|XP_002272847.1| PREDICTED: peroxidase N1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/325 (76%), Positives = 287/325 (88%), Gaps = 1/325 (0%)

Query: 1   MEGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLL 60
           ME +  + +L +A A   V  Q GTRVGFYSR+CP+AESIV+ TVQ+HF+S+P +APGLL
Sbjct: 1   METSSFLFLLLIATAAAFVQGQ-GTRVGFYSRTCPQAESIVQKTVQSHFQSNPAIAPGLL 59

Query: 61  RMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADIL 120
           RMHFHDCFV GCDASILI+G +TEKTA PNRLLRGYDVIDDAK+Q+EAACPG+VSCADIL
Sbjct: 60  RMHFHDCFVQGCDASILIDGSSTEKTAGPNRLLRGYDVIDDAKTQLEAACPGVVSCADIL 119

Query: 121 ALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDL 180
           ALAARDSVV+T+G+ W+VPTGRRDGR+SLASD  NLPG  +SVE QKQKF DKGLN QDL
Sbjct: 120 ALAARDSVVLTKGLMWKVPTGRRDGRVSLASDVNNLPGPRDSVEVQKQKFADKGLNDQDL 179

Query: 181 VTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVAL 240
           VTLVG HTIGT+ACQ F+YRLYNF+TTTA GADP++DATF+ QL+ALCP +GD +RR+AL
Sbjct: 180 VTLVGGHTIGTSACQAFRYRLYNFSTTTANGADPSMDATFVTQLQALCPADGDASRRIAL 239

Query: 241 DTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRS 300
           DTGS + FD SFF+NL+NGRGVLESDQKLW+DASTK +VQRFLGVRGL GL FNVEFGRS
Sbjct: 240 DTGSSDTFDASFFTNLKNGRGVLESDQKLWTDASTKTLVQRFLGVRGLRGLNFNVEFGRS 299

Query: 301 MVKMSNIGVKTGTDGEIRKICSAIN 325
           MVKMSNIGVKTGT+GEIRK+CSA N
Sbjct: 300 MVKMSNIGVKTGTEGEIRKLCSANN 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147779371|emb|CAN63424.1| hypothetical protein VITISV_020254 [Vitis vinifera] Back     alignment and taxonomy information
>gi|19698452|gb|AAL93154.1|AF485268_1 bacterial-induced class III peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|225447879|ref|XP_002269270.1| PREDICTED: cationic peroxidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|345104339|gb|AEN70991.1| bacterial-induced peroxidase [Gossypium mustelinum] gi|345104351|gb|AEN70997.1| bacterial-induced peroxidase [Gossypium barbadense var. brasiliense] Back     alignment and taxonomy information
>gi|359485970|ref|XP_003633366.1| PREDICTED: peroxidase N1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|324984185|gb|ADY68826.1| bacterial-induced peroxidase [Gossypium barbadense] gi|345104343|gb|AEN70993.1| bacterial-induced peroxidase [Gossypium darwinii] gi|345104355|gb|AEN70999.1| bacterial-induced peroxidase [Gossypium barbadense var. peruvianum] Back     alignment and taxonomy information
>gi|359485923|ref|XP_002269172.2| PREDICTED: peroxidase N1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147861260|emb|CAN84000.1| hypothetical protein VITISV_024915 [Vitis vinifera] Back     alignment and taxonomy information
>gi|345104347|gb|AEN70995.1| bacterial-induced peroxidase [Gossypium tomentosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
TAIR|locus:2164366328 AT5G64120 [Arabidopsis thalian 0.910 0.902 0.607 1.3e-98
TAIR|locus:2164865319 AT5G39580 [Arabidopsis thalian 0.907 0.924 0.613 1.2e-97
TAIR|locus:2164431330 AT5G64110 [Arabidopsis thalian 0.910 0.896 0.556 2.6e-86
TAIR|locus:2164426331 AT5G64100 [Arabidopsis thalian 0.901 0.885 0.568 7.2e-84
TAIR|locus:2175951313 AT5G17820 [Arabidopsis thalian 0.898 0.932 0.481 9.4e-66
TAIR|locus:2128308326 AT4G11290 [Arabidopsis thalian 0.92 0.917 0.454 9.7e-64
TAIR|locus:2207210326 RCI3 "RARE COLD INDUCIBLE GENE 0.92 0.917 0.451 2e-63
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.907 0.919 0.447 1.6e-61
TAIR|locus:2012156350 AT1G49570 [Arabidopsis thalian 0.889 0.825 0.454 5.5e-61
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.913 0.925 0.430 6.4e-60
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
 Identities = 184/303 (60%), Positives = 234/303 (77%)

Query:    23 AGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPN 82
             +GTR+GFY  +CPRAE+IV++ V A F SDP +APG+LRMHFHDCFV GCD SILI+G N
Sbjct:    33 SGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGAN 92

Query:    83 TEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGR 142
             TE+TA PN  L+G++VID+AK+Q+EAACPG+VSCADILALAARD+V++T+G  WQVPTGR
Sbjct:    93 TERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGR 152

Query:   143 RDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLY 202
             RDGR+SLAS+  NLPG  +SV  Q+QKF   GLNT+DLV LVG HTIGT  C +F+ RL+
Sbjct:   153 RDGRVSLASNANNLPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLF 212

Query:   203 NFXXXXXXXXXXXXXXXFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGV 262
             N                F+ QL+  CP+NGDG+ RV LDTGS + +DTS+++NL  GRGV
Sbjct:   213 N---TTGQTADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGV 269

Query:   263 LESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICS 322
             L+SDQ LW+D +T+ +VQ+ +  R     TFNVEF RSMV+MSNIGV TG +GEIR++CS
Sbjct:   270 LQSDQVLWTDPATRPIVQQLMAPRS----TFNVEFARSMVRMSNIGVVTGANGEIRRVCS 325

Query:   323 AIN 325
             A+N
Sbjct:   326 AVN 328
GO:0004601 "peroxidase activity" evidence=IEA;ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0045730 "respiratory burst" evidence=IDA
GO:0050832 "defense response to fungus" evidence=RCA;IMP
GO:0016020 "membrane" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0002679 "respiratory burst involved in defense response" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
TAIR|locus:2164865 AT5G39580 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164431 AT5G64110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164426 AT5G64100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012156 AT1G49570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P22196PER2_ARAHY1, ., 1, 1, ., 1, ., 70.69960.99070.9757N/Ano
O80822PER25_ARATH1, ., 1, 1, ., 1, ., 70.61180.97840.9695yesno
Q9XIV8PERN1_TOBAC1, ., 1, 1, ., 1, ., 70.73600.98150.9666N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031599001
SubName- Full=Chromosome chr12 scaffold_57, whole genome shotgun sequence; (324 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00037462001
RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (427 aa)
     •  0.899
GSVIVG00036840001
SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (514 aa)
     •  0.899
GSVIVG00036664001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (357 aa)
     •  0.899
GSVIVG00032723001
RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (410 aa)
     •  0.899
GSVIVG00032463001
RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (450 aa)
     •  0.899
GSVIVG00027735001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (422 aa)
     •  0.899
GSVIVG00024993001
SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (481 aa)
     •  0.899
GSVIVG00024561001
SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (717 aa)
     •  0.899
GSVIVG00023211001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (710 aa)
     •  0.899
GSVIVG00018772001
RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (423 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 0.0
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-171
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-66
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 1e-28
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 7e-05
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 8e-05
cd00692328 cd00692, ligninase, Ligninase and other manganese- 1e-04
pfam00141180 pfam00141, peroxidase, Peroxidase 4e-04
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 0.002
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information 
 Score =  568 bits (1465), Expect = 0.0
 Identities = 251/325 (77%), Positives = 285/325 (87%), Gaps = 2/325 (0%)

Query: 1   MEGAFAVLVLFVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLL 60
                 +  L   MA T V  Q GTRVGFYS +CP+AESIV+ TVQ+HF+S+P +APGLL
Sbjct: 2   QRFIVILFFLLAMMATTLVQGQ-GTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLL 60

Query: 61  RMHFHDCFVHGCDASILINGPNTEKTAPPNRLLRGYDVIDDAKSQIEAACPGIVSCADIL 120
           RMHFHDCFV GCDASILI+G NTEKTA PN LLRGYDVIDDAK+Q+EAACPG+VSCADIL
Sbjct: 61  RMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRGYDVIDDAKTQLEAACPGVVSCADIL 120

Query: 121 ALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDL 180
           ALAARDSVV+T G++W VPTGRRDGR+SLASD +NLPGFT+S++ QKQKF  KGLNTQDL
Sbjct: 121 ALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNTQDL 180

Query: 181 VTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVAL 240
           VTLVG HTIGTTACQ F+YRLYNF TTT  GADP+IDA+F+PQL+ALCP+NGDG+RR+AL
Sbjct: 181 VTLVGGHTIGTTACQFFRYRLYNF-TTTGNGADPSIDASFVPQLQALCPQNGDGSRRIAL 239

Query: 241 DTGSPNRFDTSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRS 300
           DTGS NRFD SFFSNL+NGRG+LESDQKLW+DAST+  VQRFLGVRGL GL FNVEFGRS
Sbjct: 240 DTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRS 299

Query: 301 MVKMSNIGVKTGTDGEIRKICSAIN 325
           MVKMSNIGVKTGT+GEIRK+CSAIN
Sbjct: 300 MVKMSNIGVKTGTNGEIRKVCSAIN 324

Length = 324
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 325
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.49
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-109  Score=792.02  Aligned_cols=309  Identities=79%  Similarity=1.285  Sum_probs=288.8

Q ss_pred             HHHHHHhhhhccCCCCcCcccCCCchHHHHHHHHHHHHHhcCCCCccchhhhhhccccccCCCceeecCCCCCCcCCCCC
Q 020511           11 FVAMAVTSVHCQAGTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEKTAPPN   90 (325)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~~E~~~~~N   90 (325)
                      |++++.+...+.++|+++||++|||++|+||++.|++++.+||+++|++|||+||||||+||||||||+++..||++++|
T Consensus        11 ~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N   90 (324)
T PLN03030         11 LLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPN   90 (324)
T ss_pred             HHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCC
Confidence            33344444345577999999999999999999999999999999999999999999999999999999976689999999


Q ss_pred             CCCchhhHHHHHHHHHHHhCCCCCcHHHHHHHhhhhhhhhcCCccccccCCCCCCCCCCcccCCCCCCCCCCHHHHHHHH
Q 020511           91 RLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDTANLPGFTESVEAQKQKF  170 (325)
Q Consensus        91 ~~L~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F  170 (325)
                      .+|+||++|+.||++||++||++||||||||+||||||+++|||.|+|++||||+++|.+.++.+||.|+.++++|++.|
T Consensus        91 ~~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F  170 (324)
T PLN03030         91 LLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF  170 (324)
T ss_pred             cCcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999987765578999999999999999


Q ss_pred             HHCCCCHHHHHHHhhcccccccccccccccccccCCCCCC-CCCCCCCcccHHHHhhcCCCCCCCCcccccCCCCCCccC
Q 020511          171 LDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNFTTTTAT-GADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFD  249 (325)
Q Consensus       171 ~~~Gls~~dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FD  249 (325)
                      +++||+.+|||+||||||||++||.+|.+|||||+++  + .+||+||++|+.+|++.||..+++...+++|+.||.+||
T Consensus       171 ~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~--~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FD  248 (324)
T PLN03030        171 AAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTT--GNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFD  248 (324)
T ss_pred             HHcCCCHHHheeeeeccccceeeeeccccccccccCC--CCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccc
Confidence            9999999999999999999999999999999999876  3 479999999999999999964333457889999999999


Q ss_pred             hHHHHHhhcCCcccchhhhhccCcchHHHHHHHhccC----CchhhHHHHHHHHHHHHHhcCCCCCCCCCcccccCccCC
Q 020511          250 TSFFSNLRNGRGVLESDQKLWSDASTKAVVQRFLGVR----GLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN  325 (325)
Q Consensus       250 n~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~yA~d~----~~~~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  325 (325)
                      |+||+||+.++|+|+|||+|+.|++|+++|++||.|+    +    .|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       249 n~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~----~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        249 ASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGL----NFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             cHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchh----hhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999999999999999999999999874    5    8999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
1sch_A294 Peanut Peroxidase Length = 294 3e-64
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 1e-63
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 8e-60
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 4e-59
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 4e-59
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 5e-57
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 2e-55
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-55
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 5e-55
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 6e-55
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 8e-55
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 8e-55
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 8e-55
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 1e-54
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-54
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-54
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 6e-54
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 4e-53
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-52
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-04
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 7e-04
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 7e-04
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 8e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 130/302 (43%), Positives = 176/302 (58%), Gaps = 18/302 (5%)
Query: 29  FYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNT---EK 85
           FY+  CP A S +KS V +    +  +   LLR+HFHDCFV GCDAS+L++  +    EK
Sbjct: 6   FYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEK 65
Query: 86  TAPPN-RLLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRD 144
           TA PN   +RG++VID  KSQ+E+ CPG+VSCADILA+AARDSVV   G SW V  GRRD
Sbjct: 66  TAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRD 125
Query: 145 GRI-SLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYN 203
               SL+S  ++LP    ++      F +KG  T++LVTL GAHTIG   C  F+ R+YN
Sbjct: 126 STTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYN 185
Query: 204 FXXXXXXXXXXXXXXXFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVL 263
                           +   L+A CP  G        D  +PN+FD +++ NLRN +G+L
Sbjct: 186 ---------ESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLL 236
Query: 264 ESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSA 323
            SDQ+L++  ST + V  +         TFN +FG +M+KM N+   TGT G+IR  C  
Sbjct: 237 HSDQQLFNGVSTDSQVTAYSNNAA----TFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRK 292
Query: 324 IN 325
            N
Sbjct: 293 TN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-172
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-172
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-171
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-170
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-169
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-168
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-162
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 3e-71
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-65
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 1e-57
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 8e-55
2e39_A344 Peroxidase; heme protein, coordination geometry of 3e-53
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 6e-50
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-49
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-10
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-09
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 6e-06
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
 Score =  478 bits (1234), Expect = e-172
 Identities = 124/305 (40%), Positives = 181/305 (59%), Gaps = 13/305 (4%)

Query: 26  RVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNTEK 85
               Y++SCP    IV+  V    +++  +A  L+R+HFHDCFV+GCDAS+L++G ++EK
Sbjct: 3   SPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSEK 62

Query: 86  TAPPNR-LLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRD 144
            A PN    RG++VID  K+ +E ACPG+VSCADIL LAARDSVV++ G  W+V  GR+D
Sbjct: 63  LAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKD 122

Query: 145 GRISLASDTANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYRLYNF 204
           G ++  +   NLP   E ++A   KF+   LN  D+V L GAHT G   C +F  RL+NF
Sbjct: 123 GLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNF 182

Query: 205 TTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGRGVLE 264
           T       D T++ + +  L+ +CP  G+      LD  + + FD ++F NL  G+G+L 
Sbjct: 183 TGA--GNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLS 240

Query: 265 SDQKLWSD----ASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKI 320
           SDQ L+S      +TK +V+ +   + L    F  +F  +M++M NI    G  GE+R  
Sbjct: 241 SDQILFSSDLAVNTTKKLVEAYSRSQSL----FFRDFTCAMIRMGNI--SNGASGEVRTN 294

Query: 321 CSAIN 325
           C  IN
Sbjct: 295 CRVIN 299
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query325
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=2.1e-110  Score=794.17  Aligned_cols=295  Identities=46%  Similarity=0.794  Sum_probs=286.9

Q ss_pred             CCcCcccCCCchHHHHHHHHHHHHHhcCCCCccchhhhhhccccccCCCceeecCCCC---CCcCCCCCC-CCchhhHHH
Q 020511           25 TRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPN---TEKTAPPNR-LLRGYDVID  100 (325)
Q Consensus        25 l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~---~E~~~~~N~-~L~g~~~I~  100 (325)
                      |+++||++|||++|+|||+.|++++.+||+++|++||||||||||+||||||||++++   +||++++|. +|+||++|+
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999875   799999998 899999999


Q ss_pred             HHHHHHHHhCCCCCcHHHHHHHhhhhhhhhcCCccccccCCCCCCCCCCcccC-CCCCCCCCCHHHHHHHHHHCCCCHHH
Q 020511          101 DAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDT-ANLPGFTESVEAQKQKFLDKGLNTQD  179 (325)
Q Consensus       101 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~d  179 (325)
                      +||++||++||++||||||||||||+||+++|||.|+|++||||++++...++ ++||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999988777 78999999999999999999999999


Q ss_pred             HHHHhhcccccccccccccccccccCCCCCCCCCCCCCcccHHHHhhcCCCCCC--CCcccccCCCCCCccChHHHHHhh
Q 020511          180 LVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGD--GARRVALDTGSPNRFDTSFFSNLR  257 (325)
Q Consensus       180 lVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~D~~tp~~FDn~Yy~~l~  257 (325)
                      |||||||||||++||.+|.+|||||+|+  +.+||+||+.|++.|++.||.+++  +++.++||+.||.+|||+||+||+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~--~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~  239 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSG--SGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ  239 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSS--SSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             hhhhhccccccccccchhhhhhcccCCC--CCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHH
Confidence            9999999999999999999999999987  678999999999999999998766  677899999999999999999999


Q ss_pred             cCCcccchhhhhccCcchHHHHHHHhccCCchhhHHHHHHHHHHHHHhcCCCCCCCCCcccccCccCC
Q 020511          258 NGRGVLESDQKLWSDASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN  325 (325)
Q Consensus       258 ~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~~~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  325 (325)
                      .++|||+|||+|+.|++|+++|++||.||+    +|+++|++||+||++|+|+||.+||||++|++||
T Consensus       240 ~~~glL~SDq~L~~d~~t~~~V~~yA~~~~----~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          240 LTLGLLTSDQALVTEANLSAAVKANAMNLT----AWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             TTCCCSHHHHGGGSSHHHHHHHHHHHHCHH----HHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hCcCCCCCCHHHhcCccHHHHHHHhccCHH----HHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            999999999999999999999999999999    9999999999999999999999999999999998
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 325
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-116
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-116
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-115
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-113
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-112
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-110
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 6e-63
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 1e-59
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 4e-57
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 1e-45
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 4e-41
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-40
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  337 bits (864), Expect = e-116
 Identities = 130/307 (42%), Positives = 175/307 (57%), Gaps = 13/307 (4%)

Query: 26  RVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPNT-- 83
              FY  +CP    IV   +     +DP +   L+R+HFHDCFV GCD S+L+N  +T  
Sbjct: 3   TPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIE 62

Query: 84  -EKTAPPNR-LLRGYDVIDDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTG 141
            E+ A PN   +RG DV++D K+ +E +CP  VSCADILA+AA  + V+  G  W VP G
Sbjct: 63  SEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLG 122

Query: 142 RRDGRISLASD-TANLPGFTESVEAQKQKFLDKGLNTQDLVTLVGAHTIGTTACQIFKYR 200
           RRD   +  +    NLP    ++   K  F  +GLNT DLVTL G HT G   C  F  R
Sbjct: 123 RRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINR 182

Query: 201 LYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRNGR 260
           LYNF+ T     DPT++ T++  LRA CP+N  G     LD  +P++FD  ++SNL    
Sbjct: 183 LYNFSNT--GNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN 240

Query: 261 GVLESDQKLWSD--ASTKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIR 318
           G+L+SDQ+L+S   A T  +V  F   +      F   F  SM+KM NIGV TG +GEIR
Sbjct: 241 GLLQSDQELFSTPGADTIPIVNSFSSNQNT----FFSNFRVSMIKMGNIGVLTGDEGEIR 296

Query: 319 KICSAIN 325
             C+ +N
Sbjct: 297 LQCNFVN 303
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query325
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.98
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.3e-104  Score=754.63  Aligned_cols=296  Identities=44%  Similarity=0.753  Sum_probs=287.0

Q ss_pred             CCCcCcccCCCchHHHHHHHHHHHHHhcCCCCccchhhhhhccccccCCCceeecCCCC---CCcCCCCCCC-CchhhHH
Q 020511           24 GTRVGFYSRSCPRAESIVKSTVQAHFRSDPTVAPGLLRMHFHDCFVHGCDASILINGPN---TEKTAPPNRL-LRGYDVI   99 (325)
Q Consensus        24 ~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~~~---~E~~~~~N~~-L~g~~~I   99 (325)
                      ||+.+||++|||++|+||+++|++.+.+||+++|+||||+||||||+||||||||++++   +|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999875   7999999985 5999999


Q ss_pred             HHHHHHHHHhCCCCCcHHHHHHHhhhhhhhhcCCccccccCCCCCCCCCCcccC-CCCCCCCCCHHHHHHHHHHCCCCHH
Q 020511          100 DDAKSQIEAACPGIVSCADILALAARDSVVVTRGISWQVPTGRRDGRISLASDT-ANLPGFTESVEAQKQKFLDKGLNTQ  178 (325)
Q Consensus       100 ~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~  178 (325)
                      +.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|+..++ .+||.|+.++++|+..|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999988777 7899999999999999999999999


Q ss_pred             HHHHHhhcccccccccccccccccccCCCCCCCCCCCCCcccHHHHhhcCCCCCCCCcccccCCCCCCccChHHHHHhhc
Q 020511          179 DLVTLVGAHTIGTTACQIFKYRLYNFTTTTATGADPTIDATFIPQLRALCPENGDGARRVALDTGSPNRFDTSFFSNLRN  258 (325)
Q Consensus       179 dlVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~  258 (325)
                      |||||+||||||++||.+|.+|+|+|+++  +.+||++++.|+..|+..||..+.+...+.+|+.||.+|||+||++++.
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~--~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~  238 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNT--GNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQ  238 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGS--SSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCC--CCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhh
Confidence            99999999999999999999999999987  7799999999999999999998777788999999999999999999999


Q ss_pred             CCcccchhhhhccCc--chHHHHHHHhccCCchhhHHHHHHHHHHHHHhcCCCCCCCCCcccccCccCC
Q 020511          259 GRGVLESDQKLWSDA--STKAVVQRFLGVRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAIN  325 (325)
Q Consensus       259 ~~gll~SD~~L~~d~--~t~~~V~~yA~d~~~~~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  325 (325)
                      ++|+|+|||+|+.||  +|+++|+.||.|++    +|+++|++||+||++|+|+||.+||||++|+++|
T Consensus       239 ~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~----~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQN----TFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             TCCSSHHHHTTTSSTTCSSHHHHHHHHHCHH----HHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCcccHhhHHHHhCCCchHHHHHHHHhhCHH----HHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            999999999999996  79999999999999    9999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure