Citrus Sinensis ID: 020518
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 325 | 2.2.26 [Sep-21-2011] | |||||||
| Q8K4F5 | 307 | Alpha/beta hydrolase doma | yes | no | 0.741 | 0.785 | 0.245 | 2e-11 | |
| Q6DRD9 | 317 | Alpha/beta hydrolase doma | yes | no | 0.698 | 0.716 | 0.243 | 7e-11 | |
| Q3SZ73 | 303 | Alpha/beta hydrolase doma | yes | no | 0.738 | 0.792 | 0.269 | 3e-10 | |
| Q8NFV4 | 315 | Alpha/beta hydrolase doma | yes | no | 0.670 | 0.692 | 0.217 | 2e-09 | |
| Q9BIB3 | 364 | Probable protein phosphat | yes | no | 0.729 | 0.651 | 0.265 | 7e-09 | |
| Q0V9K2 | 319 | Alpha/beta hydrolase doma | yes | no | 0.815 | 0.830 | 0.244 | 9e-07 | |
| Q2TAP9 | 312 | Alpha/beta hydrolase doma | N/A | no | 0.738 | 0.769 | 0.237 | 4e-06 | |
| Q9Y570 | 386 | Protein phosphatase methy | no | no | 0.301 | 0.253 | 0.318 | 1e-05 | |
| Q5R4F9 | 386 | Protein phosphatase methy | yes | no | 0.301 | 0.253 | 0.318 | 1e-05 | |
| P53219 | 342 | Abhydrolase domain-contai | yes | no | 0.652 | 0.619 | 0.236 | 1e-05 |
| >sp|Q8K4F5|ABHDB_MOUSE Alpha/beta hydrolase domain-containing protein 11 OS=Mus musculus GN=Abhd11 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHGL GS N+ S ++ + + R++ VD RNHG S P A
Sbjct: 64 LHGLFGSKTNFNSLAKAMVQRTGR-------RVLTVDARNHGDSPH-----SPDASYEAM 111
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+ + + P V++GHSMGGK A+ A R D + ++L V+D P
Sbjct: 112 SQDLQGLLPQLGLVPCVLVGHSMGGKTAMLLA--LQRPD------VVERLVVVDISPVGT 163
Query: 170 KTENSEGEVEKVLQTLQSLPSSIP---SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE 226
+ G ++ ++ +P +P +RK + + + +++ TNL + G R
Sbjct: 164 TPGSHIGAFIAAMKAVE-IPEKVPHSQARKLADKQLSSVVKEAGIRQFLLTNLVEVGGRF 222
Query: 227 TWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQ 286
+W NLD Q + ++ +P P G + ++ S P + L
Sbjct: 223 SWRLNLDTLAQHLD---KIMTFPQQREPYSGPTLFLL-GGNSTYVQPSHHSEIRRLFP-- 276
Query: 287 GDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323
+ + +PNAGHWVH D P+ ++ V +A
Sbjct: 277 ------QAQIQTVPNAGHWVHSDKPQDFMDAVTSFLA 307
|
Mus musculus (taxid: 10090) EC: 3EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|Q6DRD9|ABHDB_DANRE Alpha/beta hydrolase domain-containing protein 11 OS=Danio rerio GN=abhd11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 40/267 (14%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHGL GS N+ S +++L + +++ +D RNHG+S P
Sbjct: 73 LHGLFGSKSNFHSIAKSLVQRTGR-------KVLTIDARNHGKSPH----SPVLTYDTMT 121
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+DL +L+ + V+IGHSMGGKVA+ A S L ++L V+D P
Sbjct: 122 SDLTHLL-GQLHIGKCVLIGHSMGGKVAMTTALSQPN--------LVERLVVVDISPSLT 172
Query: 170 KTENSEGEVEKVLQTLQSLPSSIP---SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE 226
+ + ++ ++ +PS IP +R+ + + ++ +S+ +++ TNL++ +
Sbjct: 173 SAHTNFHAYIQAMKEVK-IPSDIPRSTARRLAEDQLRKIVKERSVRQFLLTNLEEQNGQY 231
Query: 227 TWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV--IQRLEGLAN 284
W NL+ + N ++ +P + +G + + + + D IQRL A+
Sbjct: 232 GWRINLE---SISNHLEDILGFPEFDTTYEGPTLFLGGSSSAYISSDDYPEIQRLFPCAD 288
Query: 285 RQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ +P+A HW+H D P
Sbjct: 289 -----------IQYIPDASHWIHADKP 304
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Danio rerio (taxid: 7955) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q3SZ73|ABHDB_BOVIN Alpha/beta hydrolase domain-containing protein 11 OS=Bos taurus GN=ABHD11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 38/278 (13%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHGL GS N+ +A TL+Q + R++ VD RNHG S+ P +
Sbjct: 60 LHGLFGSKTNFNF----VAKTLAQQTGR---RVLTVDARNHGESSH----SPDMSYEAMS 108
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
DL +L+ G P V+IGHSMGG+ A+ A Q L ++L +D +V
Sbjct: 109 KDLQDLLPHLGL-VPCVLIGHSMGGRTAMLLAL--------QRPELVERLIAVDI--SQV 157
Query: 170 KTENSEGEVEKVLQT----LQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGER 225
+T +S + + + S +RK + + S S+ + + TNL + R
Sbjct: 158 ETTSSSNFPNYIAAMRAVDMANEASLSGARKLADERLRSVIQSASIRQLLLTNLVEVDGR 217
Query: 226 ETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANR 285
W NLD Q + + +P + G + +R S P + L R
Sbjct: 218 FVWRLNLDALAQHLDKILD---FPARQETYSGPTL-FLRGGNSQFLLPSHYPEIRRLFPR 273
Query: 286 QGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323
+ +PNAGHWVH D P+ + V +A
Sbjct: 274 --------AQMQTVPNAGHWVHSDRPQDFMAAVQSFLA 303
|
Bos taurus (taxid: 9913) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8NFV4|ABHDB_HUMAN Alpha/beta hydrolase domain-containing protein 11 OS=Homo sapiens GN=ABHD11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 72/290 (24%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHGL GS N+ S ++ LA + R++ VD RNHG S P +
Sbjct: 72 LHGLFGSKTNFNSIAKILAQQTGR-------RVLTVDARNHGDSPH----SPDMSYEIMS 120
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA------------------QSCARADYGQ 151
DL +L+ G P VV+GHSMGGK A+ A +S + +
Sbjct: 121 QDLQDLLPQLGL-VPCVVVGHSMGGKTAMLLALQRPELVERLIAVDISPVESTGVSHFAT 179
Query: 152 FVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL 211
+VA + + + D +P + ++ ++ V+Q + ++
Sbjct: 180 YVAAMRAINIADELPRSRARKLADEQLSSVIQDM------------------------AV 215
Query: 212 SEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS--- 268
+ + TNL + R W NLD Q + ++ +P + G + ++
Sbjct: 216 RQHLLTNLVEVDGRFVWRVNLDALTQHLD---KILAFPQRQESYLGPTLFLLGGNSQFVH 272
Query: 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
P++++ + + +PNAGHW+H D P+ + +
Sbjct: 273 PSHHPEIMRLFP------------RAQMQTVPNAGHWIHADRPQDFIAAI 310
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Homo sapiens (taxid: 9606) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9BIB3|PPME1_CAEEL Probable protein phosphatase methylesterase 1 OS=Caenorhabditis elegans GN=B0464.9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 42/279 (15%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG--RSAEIEGLDPPHDI 105
++LHG SG W F++ LA+ +S R+V DLR HG + ++ L I
Sbjct: 88 YLLHGGGYSGLTWACFAKELATLIS-------CRVVAPDLRGHGDTKCSDEHDLSKETQI 140
Query: 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165
+ N+ D P ++GHSMGG +A+H A+ + A L V+D V
Sbjct: 141 KDIGAIFKNIFGED--DSPVCIVGHSMGGALAIHTLN--AKMISSKVAA----LIVIDVV 192
Query: 166 PGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEW---IGTNLKKS 222
G ++ + ++ L S PSS PS + ++ + G +++ + + + +++
Sbjct: 193 EG-----SAMEALGGMVHFLHSRPSSFPSIEKAIHWCLSSGTARNPTAARVSMPSQIREV 247
Query: 223 GERE-TWAFNLDGAVQMFNSYRE-MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280
E E TW +L Q + + E +S L P+ + +A V DR D D+
Sbjct: 248 SEHEYTWRIDLTTTEQYWKGWFEGLSKEFLGCSVPKMLVLAGV-----DRLDRDLT---- 298
Query: 281 GLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVA 319
+ Q GK VLP GH V D+P+ L + V
Sbjct: 299 -IGQMQ-----GKFQTCVLPKVGHCVQEDSPQNLADEVG 331
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Demethylates proteins that have been reversibly carboxymethylated. Caenorhabditis elegans (taxid: 6239) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 9 |
| >sp|Q0V9K2|ABHDB_XENTR Alpha/beta hydrolase domain-containing protein 11 OS=Xenopus tropicalis GN=abhd11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 122/311 (39%), Gaps = 46/311 (14%)
Query: 20 NSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSE 79
N+ TR + L+Y+ S+ P +LHGL GS N++S +R L +
Sbjct: 48 NTHATRVVD-LSYDLYDGSAPGP---PLVLLHGLFGSKSNFQSIARALVRKTGR------ 97
Query: 80 WRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALH 139
+++ +D RNHG S + + P A+ L L V+IGHSMGGK A+
Sbjct: 98 -KVLTLDARNHGCSPHDDIMTYPAMSADVCQILHKLQITSC-----VLIGHSMGGKTAMT 151
Query: 140 FAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP---SRK 196
A Q L ++ +D P + +Q + L IP +R+
Sbjct: 152 VAL--------QEPKLVERFVSVDISPAATVPQTGFPHYIAAMQKVH-LEGKIPRSTARR 202
Query: 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256
+ S+ +++ TNL + W NL+ Q +++ +P + P
Sbjct: 203 LAEEQLSSTVKEASIRQFLLTNLVQENGTFKWRVNLEVISQHL---QDLLDFPEFQEPYP 259
Query: 257 GMEIAIVRAEK---SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG 313
G + + A S P+ I+RL AN V + AGHWVH D
Sbjct: 260 GPALFLGGANSPYISSENYPE-IERLFPCAN-----------VEYIFGAGHWVHADKTHD 307
Query: 314 LLEIVAPRIAS 324
L + + S
Sbjct: 308 FLNSICNFVES 318
|
Xenopus tropicalis (taxid: 8364) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q2TAP9|ABHDB_XENLA Alpha/beta hydrolase domain-containing protein 11 OS=Xenopus laevis GN=abhd11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 112/282 (39%), Gaps = 42/282 (14%)
Query: 49 VLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108
+LHGL GS N+++ +R L + +++ +D RNHG S + + P A+
Sbjct: 66 LLHGLFGSKSNFQTIARALVRKTGR-------KVLTLDARNHGCSPHDDIMTYPAMSADV 118
Query: 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168
L L V+IGHSMGGK A+ A Q L ++L +D P
Sbjct: 119 CQILHQLQITNC-----VLIGHSMGGKTAMTVAL--------QEPKLVERLVSVDISPAP 165
Query: 169 VKTENSEGEVEKVLQTL---QSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGER 225
+ +Q + + +P S +R+ + S+ +++ TNL +
Sbjct: 166 TVPQTGFPHYIAAMQKVHFEEKMPRST-ARRLADEQLSSTVKEASIRQFLLTNLVQENGT 224
Query: 226 ETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK---SDRWDPDVIQRLEGL 282
W NL+ + +++ +P + P G + + A S P+ I+RL
Sbjct: 225 FKWRVNLEVISRHL---QDLLDFPEFQEPYPGPVLFLGGANSPYISSENYPE-IERLFPF 280
Query: 283 ANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
AN V + AGHWVH D L + + S
Sbjct: 281 AN-----------VEYIFGAGHWVHADKTHDFLNAICNFVES 311
|
Xenopus laevis (taxid: 8355) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9Y570|PPME1_HUMAN Protein phosphatase methylesterase 1 OS=Homo sapiens GN=PPME1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 32 YEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG 91
+ +S S+ P +LHG S +W F+ + S + + R+V +DLR+HG
Sbjct: 67 FRVYKSGSEGP---VLLLLHGGGHSALSWAVFTAAIISRV-------QCRIVALDLRSHG 116
Query: 92 RSAEIEGLDPPHDIA--NAANDLANLVKAKGWDWPD--VVIGHSMGGKVALHFAQS 143
+ + P D++ A D+ N+V+A D P ++IGHSMGG +A+H A S
Sbjct: 117 ETK----VKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASS 168
|
Demethylates proteins that have been reversibly carboxymethylated. Demethylates PPP2CB (in vitro) and PPP2CA. Binding to PPP2CA displaces the manganese ion and inactivates the enzyme. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 9 |
| >sp|Q5R4F9|PPME1_PONAB Protein phosphatase methylesterase 1 OS=Pongo abelii GN=PPME1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 32 YEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG 91
+ +S S+ P +LHG S +W F+ + S + + R+V +DLR+HG
Sbjct: 67 FRVYKSGSEGP---VLLLLHGGGHSALSWAVFTAAIISRV-------QCRIVALDLRSHG 116
Query: 92 RSAEIEGLDPPHDIA--NAANDLANLVKAKGWDWPD--VVIGHSMGGKVALHFAQS 143
+ + P D++ A D+ N+V+A D P ++IGHSMGG +A+H A S
Sbjct: 117 ETK----VKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASS 168
|
Demethylates proteins that have been reversibly carboxymethylated. Demethylates PPP2CB (in vitro) and PPP2CA. Binding to PPP2CA displaces the manganese ion and inactivates the enzyme. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 9 |
| >sp|P53219|IMO32_YEAST Abhydrolase domain-containing protein IMO32 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IMO32 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 22 PTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR 81
P S + + V++ + +LHGL G+ N RS RNL L +
Sbjct: 52 PLDLSYDIIKRDAVKTGDEGKPRPPIIILHGLFGNKLNNRSIGRNLNKKLGRD------- 104
Query: 82 MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALH 139
+ L+DLRNHG S H+ + D+ + + + ++IGHSMGGKVA+
Sbjct: 105 VYLLDLRNHGSSPH----SSVHNYEVMSEDVKHFITKHELNTNGGPIIIGHSMGGKVAMM 160
Query: 140 FAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE-VEKVLQTLQSLPSSIPSRKWL 198
+ L L +++ P ++ E ++ +++ + +I + K
Sbjct: 161 LVLKNPQ--------LCSMLVCIENAPVSLRPNAEFVEYIKALMEIVNDKGKTIRTLKQA 212
Query: 199 VNHMME-LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257
H+ E +G ++ + ++ T LKK V+M NS SY P
Sbjct: 213 DEHLAERIGGNELVRRFLLTALKK--------------VKMDNSSSVSSYTFEERIPLAT 258
Query: 258 MEIAIVRAE 266
++ AIV+ E
Sbjct: 259 LKDAIVKGE 267
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 325 | ||||||
| 225440825 | 331 | PREDICTED: abhydrolase domain-containing | 0.996 | 0.978 | 0.782 | 1e-146 | |
| 255578981 | 317 | valacyclovir hydrolase, putative [Ricinu | 0.941 | 0.965 | 0.761 | 1e-135 | |
| 449500882 | 330 | PREDICTED: alpha/beta hydrolase domain-c | 0.993 | 0.978 | 0.692 | 1e-126 | |
| 449462942 | 330 | PREDICTED: alpha/beta hydrolase domain-c | 0.993 | 0.978 | 0.689 | 1e-126 | |
| 224138450 | 310 | predicted protein [Populus trichocarpa] | 0.904 | 0.948 | 0.684 | 1e-125 | |
| 357125989 | 343 | PREDICTED: abhydrolase domain-containing | 0.96 | 0.909 | 0.679 | 1e-124 | |
| 297816548 | 333 | hypothetical protein ARALYDRAFT_485626 [ | 0.990 | 0.966 | 0.683 | 1e-123 | |
| 22331752 | 335 | esterase/lipase domain-containing protei | 0.987 | 0.958 | 0.673 | 1e-123 | |
| 242059325 | 342 | hypothetical protein SORBIDRAFT_03g04068 | 0.956 | 0.909 | 0.678 | 1e-122 | |
| 226494143 | 344 | catalytic/ hydrolase [Zea mays] gi|19560 | 0.956 | 0.904 | 0.681 | 1e-121 |
| >gi|225440825|ref|XP_002282116.1| PREDICTED: abhydrolase domain-containing protein 11 [Vitis vinifera] gi|297740142|emb|CBI30324.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/331 (78%), Positives = 291/331 (87%), Gaps = 7/331 (2%)
Query: 1 MARILKNRHNSLNLLTRFLNSPT------TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLL 54
MAR L+N+ +LL RFLNSP+ R L+T+AYEEVR S++RPY STAFV+HGLL
Sbjct: 1 MARALRNK-PGFHLLARFLNSPSPGFLGSLRWLETIAYEEVRVSTERPYNSTAFVVHGLL 59
Query: 55 GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLAN 114
GSGRNWRSFSRNLA+TLS +S+SS+WRMVLVD RNHGRSAE+EGL PPHDI NAA DLAN
Sbjct: 60 GSGRNWRSFSRNLAATLSNSSSSSDWRMVLVDQRNHGRSAEVEGLYPPHDIVNAAQDLAN 119
Query: 115 LVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENS 174
LVK++GW WPDVV+GHS+GGKVAL FA+SCAR DYG+ ALPKQL VLDSVPGKV EN
Sbjct: 120 LVKSQGWAWPDVVMGHSLGGKVALQFAESCARGDYGESAALPKQLLVLDSVPGKVNHENG 179
Query: 175 EGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDG 234
+GEVEKVL+TLQ+LPSS+PSRKWLVNHMMELGFSKSLS WIG+NLKKSGE ETWAFNL+G
Sbjct: 180 DGEVEKVLETLQNLPSSVPSRKWLVNHMMELGFSKSLSNWIGSNLKKSGEHETWAFNLEG 239
Query: 235 AVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKV 294
AVQMFNSYRE YW LLEHPPQGMEI IVRAE SDRWDPDVIQRLE LA R+G+GSEGKV
Sbjct: 240 AVQMFNSYRETDYWSLLEHPPQGMEITIVRAENSDRWDPDVIQRLESLAAREGNGSEGKV 299
Query: 295 SVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
SVHVLP AGHWVHVDNPKGLL+IVAP++AS+
Sbjct: 300 SVHVLPKAGHWVHVDNPKGLLDIVAPKLASL 330
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578981|ref|XP_002530343.1| valacyclovir hydrolase, putative [Ricinus communis] gi|223530147|gb|EEF32059.1| valacyclovir hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/314 (76%), Positives = 276/314 (87%), Gaps = 8/314 (2%)
Query: 12 LNLLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL 71
NLLTRFL R+L+TLA+EEVRSS ++PYTSTAF+LHGLLGSGRNWRS S
Sbjct: 10 FNLLTRFL---YRRTLETLAFEEVRSSPEKPYTSTAFILHGLLGSGRNWRS-----FSRS 61
Query: 72 SQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHS 131
+S SSEWRMVLVDLRNHG+SA+++ LDPPHD+ NAA DL+NL+K++GW WPDVVIGHS
Sbjct: 62 LTSSLSSEWRMVLVDLRNHGKSADLKSLDPPHDMFNAAKDLSNLIKSQGWAWPDVVIGHS 121
Query: 132 MGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191
MGGKVAL FA SCAR DYGQ VA PKQLWVLDSVPG+V ENS+G+VEKVL+TLQSLPSS
Sbjct: 122 MGGKVALQFANSCARGDYGQSVAFPKQLWVLDSVPGEVSPENSDGDVEKVLKTLQSLPSS 181
Query: 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251
+PSRKWLVNHM+ELGFSKSLSEWIG+NLKKSG++ETWAFNL+GA+QMFNSYRE SYW LL
Sbjct: 182 LPSRKWLVNHMIELGFSKSLSEWIGSNLKKSGDQETWAFNLEGAIQMFNSYRETSYWSLL 241
Query: 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
EH P+GMEI IV AEKSDRW PDVI++LE LA R+G+GSEGKVS+HVL N+GHWVHVDNP
Sbjct: 242 EHLPEGMEIGIVVAEKSDRWKPDVIEQLESLAGRKGNGSEGKVSLHVLANSGHWVHVDNP 301
Query: 312 KGLLEIVAPRIASV 325
KGLL+IVAP+IAS+
Sbjct: 302 KGLLDIVAPKIASL 315
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449500882|ref|XP_004161219.1| PREDICTED: alpha/beta hydrolase domain-containing protein 11-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/332 (69%), Positives = 274/332 (82%), Gaps = 9/332 (2%)
Query: 1 MARILKNRHNSLNLLTRFLNSP-------TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGL 53
MA I +N+ + + LL+R +NSP + RSLQTLAYEEVR+S D PY STAF+LHGL
Sbjct: 1 MAGIFRNK-SGIRLLSRIINSPDLSFNCCSWRSLQTLAYEEVRTSPDGPYDSTAFILHGL 59
Query: 54 LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLA 113
LGSGRNWRSFSRNL S S+SSEWR+VLVDLRNHG+SAE+EG PPHD+ NAA DLA
Sbjct: 60 LGSGRNWRSFSRNLLSR-LSNSSSSEWRVVLVDLRNHGKSAELEGFGPPHDMVNAAKDLA 118
Query: 114 NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173
L++++ W WPDVV+GHSMGGKVAL F +SC R DYG +LPKQLWVLDSVPG V EN
Sbjct: 119 KLIESQDWAWPDVVMGHSMGGKVALQFLESCNRGDYGNSASLPKQLWVLDSVPGNVNPEN 178
Query: 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLD 233
S+GEVEKVL+TLQ LPS IPSRKWLV HM+E GFSKSLS+WIG+NLKKSGE ETW+FNL+
Sbjct: 179 SDGEVEKVLKTLQGLPSLIPSRKWLVTHMIERGFSKSLSDWIGSNLKKSGEHETWSFNLE 238
Query: 234 GAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGK 293
GA+QMFNS+RE SYW LLEHPP+ EIAI+RA SDRW DV+Q+LE L+++ + S+G+
Sbjct: 239 GAIQMFNSFRETSYWSLLEHPPKDTEIAIIRAANSDRWSSDVVQQLERLSSKGSEESKGR 298
Query: 294 VSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
VS HVLPN+GHWVHVDNPKGLLEIVAP+I+S+
Sbjct: 299 VSAHVLPNSGHWVHVDNPKGLLEIVAPKISSL 330
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449462942|ref|XP_004149194.1| PREDICTED: alpha/beta hydrolase domain-containing protein 11-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/332 (68%), Positives = 274/332 (82%), Gaps = 9/332 (2%)
Query: 1 MARILKNRHNSLNLLTRFLNSP-------TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGL 53
MA + +N+ + + LL+R +NSP + RSLQTLAYEEVR+S D PY STAF+LHGL
Sbjct: 1 MAGVFRNK-SGIRLLSRIINSPDLSFNCCSWRSLQTLAYEEVRTSPDGPYDSTAFILHGL 59
Query: 54 LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLA 113
LGSGRNWRSFSRNL S S+SSEWR+VLVDLRNHG+SAE+EG PPHD+ NAA DLA
Sbjct: 60 LGSGRNWRSFSRNLLSR-LSNSSSSEWRVVLVDLRNHGKSAELEGFGPPHDMVNAAKDLA 118
Query: 114 NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173
L++++ W WPDVV+GHSMGGKVAL F +SC R DYG +LPKQLWVLDSVPG V EN
Sbjct: 119 KLIESQDWAWPDVVMGHSMGGKVALQFLESCNRGDYGNSASLPKQLWVLDSVPGNVNPEN 178
Query: 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLD 233
S+GEVEKVL+TLQ LPS IPSRKWLV HM+E GFSKSLS+WIG+NLKKSGE ETW+FNL+
Sbjct: 179 SDGEVEKVLKTLQGLPSLIPSRKWLVTHMIERGFSKSLSDWIGSNLKKSGEHETWSFNLE 238
Query: 234 GAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGK 293
GA+QMFNS+RE SYW LLEHPP+ EIAI+RA SDRW DV+Q+LE L+++ + S+G+
Sbjct: 239 GAIQMFNSFRETSYWSLLEHPPKDTEIAIIRAANSDRWRSDVVQQLERLSSKGSEESKGR 298
Query: 294 VSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
VS HVLPN+GHWVHVDNPKGLLEIVAP+I+S+
Sbjct: 299 VSAHVLPNSGHWVHVDNPKGLLEIVAPKISSL 330
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138450|ref|XP_002322817.1| predicted protein [Populus trichocarpa] gi|222867447|gb|EEF04578.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 259/323 (80%), Gaps = 29/323 (8%)
Query: 10 NSLNLLTRFLNSPT-------TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS 62
LNL+TRF+NS T TR+LQTLA++E++SS ++P TAF+LHGLLGS
Sbjct: 8 QCLNLVTRFINSRTPPFHYKNTRTLQTLAFKEIQSSPNKPDAPTAFILHGLLGS------ 61
Query: 63 FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122
EWRMVLVD+RNHG+S +IEGLDPPH++ NAA D+ANLVK KGW+
Sbjct: 62 ----------------EWRMVLVDMRNHGKSVDIEGLDPPHNMFNAAMDVANLVKEKGWE 105
Query: 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182
WPDVVIGHSMGGKVAL FA+SC R DYG V+ PKQLWVLDSVP +V E S+GEVEKVL
Sbjct: 106 WPDVVIGHSMGGKVALQFAESCTRGDYGHSVSFPKQLWVLDSVPVEVSPEYSDGEVEKVL 165
Query: 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY 242
+TL SLPS IPSR WLVNHM++LGFSKSLSEWIG+NLKKSGE+E+WAF+L GA+QMFNSY
Sbjct: 166 RTLHSLPSPIPSRSWLVNHMIQLGFSKSLSEWIGSNLKKSGEQESWAFDLKGAIQMFNSY 225
Query: 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNA 302
RE SYW LLEHPP+ MEI +V AEKSDRWDPD+IQRLE L++R GD SEGK S+HVLPN+
Sbjct: 226 RETSYWSLLEHPPKEMEIGLVVAEKSDRWDPDLIQRLESLSSRTGDESEGKFSLHVLPNS 285
Query: 303 GHWVHVDNPKGLLEIVAPRIASV 325
GHWVHVDNPKGLLEIV PR+AS+
Sbjct: 286 GHWVHVDNPKGLLEIVTPRMASL 308
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357125989|ref|XP_003564671.1| PREDICTED: abhydrolase domain-containing protein 11-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 259/312 (83%)
Query: 14 LLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ 73
LL+ ++S + +TLA++E++ S ++P T+TAFVLHGLLGSGRNWR+FSR LAS L
Sbjct: 29 LLSSSVHSDASHKTETLAFDEIQLSPEKPSTATAFVLHGLLGSGRNWRTFSRTLASQLRD 88
Query: 74 TSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMG 133
S S EWRMVLVDLRNHG SA I+GL PPHD+++AA DLA+LVKAKGW WP+VV+GHSMG
Sbjct: 89 RSPSDEWRMVLVDLRNHGNSARIKGLCPPHDMSSAAKDLADLVKAKGWSWPEVVMGHSMG 148
Query: 134 GKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP 193
GKVAL FA+SC+R DYG+ ALPKQLWVLDSVPG+VK +NS+GEVE+VLQTL SLP+S+P
Sbjct: 149 GKVALDFAESCSRGDYGESAALPKQLWVLDSVPGQVKIDNSDGEVERVLQTLASLPASLP 208
Query: 194 SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253
SRKW+V+HM+ LGFSKSLS+WIG+NLKK E TW F+L A+ MFNSYRE SYW LLE+
Sbjct: 209 SRKWVVDHMISLGFSKSLSDWIGSNLKKDNEHVTWGFDLQAAIDMFNSYRERSYWTLLEN 268
Query: 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG 313
PP+GMEI+IV+AE+SDRW PD +QRL+ L+ R GKVS+HVLPN+GHWVHVDNPKG
Sbjct: 269 PPKGMEISIVQAEQSDRWHPDDVQRLKALSRRGSKPDGGKVSLHVLPNSGHWVHVDNPKG 328
Query: 314 LLEIVAPRIASV 325
LLEI+AP S
Sbjct: 329 LLEIMAPNFLST 340
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297816548|ref|XP_002876157.1| hypothetical protein ARALYDRAFT_485626 [Arabidopsis lyrata subsp. lyrata] gi|297321995|gb|EFH52416.1| hypothetical protein ARALYDRAFT_485626 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/332 (68%), Positives = 263/332 (79%), Gaps = 10/332 (3%)
Query: 1 MARILKNRHNSLNLLTRFLNSP--------TTRSLQTLAYEEVRSSSDRPYTSTAFVLHG 52
MAR LKNR S L RFL SP T+RSLQTLAYEEVRSS DR STA +LHG
Sbjct: 1 MARTLKNRFES-RFLIRFLQSPSLFVSCFTTSRSLQTLAYEEVRSSGDRKSESTALILHG 59
Query: 53 LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL 112
LLGSGRNWRS ++ S++S W+M+LVDLRNHGRSAE+EGL+PPHD+ N+A DL
Sbjct: 60 LLGSGRNWRS-FSRSLASSLSVSSASHWKMILVDLRNHGRSAEVEGLNPPHDLVNSAKDL 118
Query: 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172
A+LVKA GW WPDVVIGHS+GGKVAL F +SCAR D+G + PKQLWVLDSVPG+VK E
Sbjct: 119 ADLVKASGWKWPDVVIGHSLGGKVALQFMESCARGDFGDTASPPKQLWVLDSVPGEVKAE 178
Query: 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNL 232
S+GEVEKVL+TLQSLPS IPSRKWLV+HM+ELGFS+SLSEWIG+NLK+SG+ E WAFNL
Sbjct: 179 KSDGEVEKVLKTLQSLPSPIPSRKWLVDHMVELGFSRSLSEWIGSNLKRSGDSEIWAFNL 238
Query: 233 DGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEG 292
DGAVQMFNSYRE SYW LLE+P + EI V AEKSDRWD D +RLE +AN++ SEG
Sbjct: 239 DGAVQMFNSYRETSYWSLLENPSKETEINFVIAEKSDRWDNDTTKRLEKIANQRQHVSEG 298
Query: 293 KVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
KV+ H+L N+GHWVH DNPKGLLEIV+P S
Sbjct: 299 KVATHLLRNSGHWVHTDNPKGLLEIVSPNFFS 330
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331752|ref|NP_190825.2| esterase/lipase domain-containing protein [Arabidopsis thaliana] gi|18377853|gb|AAL67113.1| AT3g52570/F22O6_50 [Arabidopsis thaliana] gi|20453341|gb|AAM19909.1| AT3g52570/F22O6_50 [Arabidopsis thaliana] gi|332645443|gb|AEE78964.1| esterase/lipase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/331 (67%), Positives = 266/331 (80%), Gaps = 10/331 (3%)
Query: 2 ARILKNRHNSLNLLTRFLNSPT--------TRSLQTLAYEEVRSSSDRPYTSTAFVLHGL 53
RI+ NR S L RFL SPT +RSLQTLAYEEVR+S DR STA +LHGL
Sbjct: 4 TRIITNRFES-RFLIRFLESPTLFASCFTSSRSLQTLAYEEVRTSGDRESESTALILHGL 62
Query: 54 LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLA 113
LGSGRNWRS ++ S++S+W+M+LVDLRNHGRSAE+EGL+PPHD+ N+A DLA
Sbjct: 63 LGSGRNWRS-FSRSLASSLSVSSASDWKMILVDLRNHGRSAEVEGLNPPHDLVNSAKDLA 121
Query: 114 NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173
+LVKA GW+WPDVVIGHS+GGKVAL F +SCAR D+G+ + PKQLWVLDSVPG+VK E
Sbjct: 122 DLVKASGWNWPDVVIGHSLGGKVALQFMESCARGDFGESASPPKQLWVLDSVPGEVKAEK 181
Query: 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLD 233
S+GEVEKVL+TLQSLPSSIPSRKWLV+ M+ELGFS+SLSEWIG+NLK+SG+ ETW FNLD
Sbjct: 182 SDGEVEKVLKTLQSLPSSIPSRKWLVDRMVELGFSRSLSEWIGSNLKRSGDSETWTFNLD 241
Query: 234 GAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGK 293
GAVQMFNSYRE SYW LLE+PP+ EI V AEKSDRWD D +RLE +AN++ + +EGK
Sbjct: 242 GAVQMFNSYRETSYWSLLENPPKETEINFVIAEKSDRWDNDTTKRLETIANQRQNVAEGK 301
Query: 294 VSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
V+ H+L N+GHWVH DNPKGLLEIV+P S
Sbjct: 302 VATHLLRNSGHWVHTDNPKGLLEIVSPNFFS 332
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242059325|ref|XP_002458808.1| hypothetical protein SORBIDRAFT_03g040680 [Sorghum bicolor] gi|241930783|gb|EES03928.1| hypothetical protein SORBIDRAFT_03g040680 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/311 (67%), Positives = 255/311 (81%)
Query: 14 LLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ 73
LL+ ++S T++ +TLA++E++ S ++P T+TAFVLHGLLGSGRNWRSFSR L S L
Sbjct: 28 LLSSPVHSVTSQQTETLAFDEIQLSPEKPPTATAFVLHGLLGSGRNWRSFSRALVSELHN 87
Query: 74 TSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMG 133
S S EWRMVLVDLRNHGRSA I+G PPH+I+ AA DLA+LVKA+GW WPDVV+GHSMG
Sbjct: 88 RSPSDEWRMVLVDLRNHGRSAGIKGFGPPHNISTAAKDLADLVKARGWPWPDVVVGHSMG 147
Query: 134 GKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP 193
GKVAL FA+SC+R YG LPKQLWVLDSVPG+V+T+NS+GEVE+VLQTL SLPSS+P
Sbjct: 148 GKVALDFAESCSRGVYGDSADLPKQLWVLDSVPGQVETDNSDGEVERVLQTLASLPSSLP 207
Query: 194 SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253
SRKW+V+HM+ LGFSKSLSEWIG+NLKK + TWAF+L A+ MF+SYRE YW LLEH
Sbjct: 208 SRKWVVDHMLSLGFSKSLSEWIGSNLKKDNDHVTWAFDLQAAIDMFSSYRERDYWALLEH 267
Query: 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG 313
PP+ +EIAIV+AE SDRW PD +QRL+ LA R+ GKVS+HVLPN+GHWVHVDNPKG
Sbjct: 268 PPKDLEIAIVQAEHSDRWVPDDVQRLKALARRESKTDIGKVSLHVLPNSGHWVHVDNPKG 327
Query: 314 LLEIVAPRIAS 324
LLEI+ P S
Sbjct: 328 LLEIMVPNFLS 338
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226494143|ref|NP_001147010.1| catalytic/ hydrolase [Zea mays] gi|195606444|gb|ACG25052.1| catalytic/ hydrolase [Zea mays] gi|414879581|tpg|DAA56712.1| TPA: catalytic/ hydrolase [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/311 (68%), Positives = 253/311 (81%)
Query: 14 LLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ 73
LL+ ++S +TLA++E++ S ++P T+TAFVLHGLLGSGRNWRSFSR L S L
Sbjct: 30 LLSSPVHSDAPHQTETLAFDEIQLSPEKPATATAFVLHGLLGSGRNWRSFSRALVSELRN 89
Query: 74 TSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMG 133
S S EWRMVLVDLRNHGRSA I+GL PPH+I+ AA DLA+LVKA+GW WPDVV+GHSMG
Sbjct: 90 RSPSDEWRMVLVDLRNHGRSAGIKGLGPPHNISTAAKDLADLVKARGWPWPDVVVGHSMG 149
Query: 134 GKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP 193
GKVAL FA+SC+R YG LPKQLWVLDSVPG+V+TENS+GEVE+VLQTL SLPSS+P
Sbjct: 150 GKVALDFAESCSRGVYGDSANLPKQLWVLDSVPGQVETENSDGEVEQVLQTLASLPSSLP 209
Query: 194 SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253
SRKW+V+HM+ LGFSKSLSEWIG+NLKK + TWAFNL A+ MF+SYRE YW +LEH
Sbjct: 210 SRKWVVDHMLSLGFSKSLSEWIGSNLKKDNDHVTWAFNLQAAIDMFSSYRERDYWSVLEH 269
Query: 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG 313
PP+ +EIAIV+AE SDRW PD +QRL+ LA R+ GKVS+HVLPN+GHWVHVDNPKG
Sbjct: 270 PPKDLEIAIVQAEHSDRWVPDDVQRLKALAGRESKPDVGKVSLHVLPNSGHWVHVDNPKG 329
Query: 314 LLEIVAPRIAS 324
LLEI+ P S
Sbjct: 330 LLEIMVPNFLS 340
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 325 | ||||||
| TAIR|locus:2079899 | 335 | AT3G52570 [Arabidopsis thalian | 0.984 | 0.955 | 0.651 | 3.5e-114 | |
| TAIR|locus:2140563 | 380 | AT4G10030 "AT4G10030" [Arabido | 0.803 | 0.686 | 0.346 | 7.3e-43 | |
| RGD|1304681 | 307 | Abhd11 "abhydrolase domain con | 0.553 | 0.586 | 0.268 | 2.8e-09 | |
| UNIPROTKB|Q8EEP4 | 258 | ybfF "Putative esterase YbfF" | 0.516 | 0.651 | 0.252 | 5.7e-07 | |
| TIGR_CMR|SO_2333 | 258 | SO_2333 "hydrolase, alpha/beta | 0.516 | 0.651 | 0.252 | 5.7e-07 | |
| FB|FBgn0029942 | 308 | CG2059 [Drosophila melanogaste | 0.52 | 0.548 | 0.248 | 2.9e-06 | |
| ZFIN|ZDB-GENE-040909-1 | 317 | abhd11 "abhydrolase domain con | 0.584 | 0.599 | 0.253 | 1.1e-05 | |
| TIGR_CMR|SPO_2943 | 252 | SPO_2943 "hydrolase, alpha/bet | 0.421 | 0.543 | 0.289 | 1.3e-05 | |
| UNIPROTKB|F1PRS1 | 304 | ABHD11 "Uncharacterized protei | 0.566 | 0.605 | 0.251 | 4.2e-05 | |
| UNIPROTKB|F1RJM8 | 312 | ABHD11 "Uncharacterized protei | 0.566 | 0.589 | 0.260 | 8.9e-05 |
| TAIR|locus:2079899 AT3G52570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 215/330 (65%), Positives = 253/330 (76%)
Query: 3 RILKNRHNSLNLLTRFLNSPT--------TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLL 54
RI+ NR S L RFL SPT +RSLQTLAYEEVR+S DR STA +LHGLL
Sbjct: 5 RIITNRFES-RFLIRFLESPTLFASCFTSSRSLQTLAYEEVRTSGDRESESTALILHGLL 63
Query: 55 GSGRNWRSFSRNXXXXXXXXXXXXEWRMVLVDLRNHGRSAEIEGLDPPHDIXXXXXXXXX 114
GSGRNWRSFSR+ +W+M+LVDLRNHGRSAE+EGL+PPHD+
Sbjct: 64 GSGRNWRSFSRSLASSLSVSSAS-DWKMILVDLRNHGRSAEVEGLNPPHDLVNSAKDLAD 122
Query: 115 XXXXXGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENS 174
GW+WPDVVIGHS+GGKVAL F +SCAR D+G+ + PKQLWVLDSVPG+VK E S
Sbjct: 123 LVKASGWNWPDVVIGHSLGGKVALQFMESCARGDFGESASPPKQLWVLDSVPGEVKAEKS 182
Query: 175 EGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDG 234
+GEVEKVL+TLQSLPSSIPSRKWLV+ M+ELGFS+SLSEWIG+NLK+SG+ ETW FNLDG
Sbjct: 183 DGEVEKVLKTLQSLPSSIPSRKWLVDRMVELGFSRSLSEWIGSNLKRSGDSETWTFNLDG 242
Query: 235 AVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKV 294
AVQMFNSYRE SYW LLE+PP+ EI V AEKSDRWD D +RLE +AN++ + +EGKV
Sbjct: 243 AVQMFNSYRETSYWSLLENPPKETEINFVIAEKSDRWDNDTTKRLETIANQRQNVAEGKV 302
Query: 295 SVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
+ H+L N+GHWVH DNPKGLLEIV+P S
Sbjct: 303 ATHLLRNSGHWVHTDNPKGLLEIVSPNFFS 332
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| TAIR|locus:2140563 AT4G10030 "AT4G10030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 99/286 (34%), Positives = 158/286 (55%)
Query: 42 PYTSTAFVLHGLLGSGRNWRSFSRNXXXXXXXXXXXXEWRMVLVDLRNHGRSAEIEGLDP 101
P T TA +LHG+LGSG+NW +F+R W+ +LVDLR HG S ++ P
Sbjct: 104 PDTPTAVLLHGILGSGKNWGTFARRLAHEFPT------WQFLLVDLRCHGDSTSLKKRGP 157
Query: 102 PHDIXXXXXXXXXXXXXXGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161
H + P V++GHS GGKV L + A+ + P + WV
Sbjct: 158 -HSVATTASDVLKLVGQLRLT-PRVLVGHSFGGKVVLSMVEQAAKP-----LPRPVRAWV 210
Query: 162 LDSVPGKVKTE-NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLK 220
LD+ PGKV+ + E +++ L+ LP + S++ ++ ++ GFS +++W+ TNL+
Sbjct: 211 LDATPGKVRAGGDGEDHPRELISFLRKLPKVVLSKREVLKALINEGFSNDVAQWVITNLR 270
Query: 221 KSGERET---WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS-DRWDPDVI 276
+G + W F+LDG +++ SY E + W +E+ P+G+ + ++AE+S RW + +
Sbjct: 271 PTGPSASSFSWTFDLDGIAELYQSYEETNLWNFVENLPRGVHVNFLKAERSLHRWALEDL 330
Query: 277 QRL---EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVA 319
QR+ E LA+ +G G V +HVL +AGHWVH DNP GL I++
Sbjct: 331 QRIHAAEELASEEGGG----VEMHVLEDAGHWVHTDNPDGLFRILS 372
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| RGD|1304681 Abhd11 "abhydrolase domain containing 11" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 122 (48.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 55/205 (26%), Positives = 83/205 (40%)
Query: 40 DRPYTSTAFVL-HGLLGSGRNWRSFSRNXXXXXXXXXXXXEWRMVLVDLRNHGRSAEIEG 98
D T A VL HGL GS N+ S ++ R++ VD RNHG S
Sbjct: 53 DGDATLPAIVLLHGLFGSKSNFNSLAKALVQRTGR-------RVLTVDARNHGDSPH--- 102
Query: 99 LDPPHDIXXXXXXXXXXXXXXGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQ 158
P G P V++GHSMGGK A+ A R D + ++
Sbjct: 103 -SPDASYEAMSQDLQGLLPQLGLV-PSVLVGHSMGGKTAMLLALQ--RPD------VVER 152
Query: 159 LWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP---SRKWLVNHMMELGFSKSLSEWI 215
L V+D P + G ++ + +P +IP +RK + + S+ +++
Sbjct: 153 LVVVDISPAGTTPGSYLGNFIAAMKAVD-IPENIPHSRARKLADEQLSSVVKEASVRQFL 211
Query: 216 GTNLKKSGERETWAFNLDGAVQMFN 240
TNL + R +W NLD Q +
Sbjct: 212 LTNLVEVNGRFSWRVNLDALAQQLD 236
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| UNIPROTKB|Q8EEP4 ybfF "Putative esterase YbfF" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 117 (46.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 50/198 (25%), Positives = 84/198 (42%)
Query: 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186
++GHSMGGK+A+ A +A P + ++ V + + V L+
Sbjct: 78 IVGHSMGGKIAMATA-----------LAYPNR--IISLVAADIAPVAYQPRHNAVFAALE 124
Query: 187 SLP-SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM 245
SLP R++ + H++ G + ++++ NL++SG W NL G + + Y +
Sbjct: 125 SLPLEGHTDRRFALAHLLAAGIDDATAQFLLKNLQRSGTGFRWKMNLTG---LKSGYPNI 181
Query: 246 SYWPLLEHPPQ----GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN 301
W L + PQ G + +R S+ R E L RQ ++ K L
Sbjct: 182 IGWHNLPNEPQLVFAGPSL-FIRGGDSNY--VAAAHRDEIL--RQFPQAQAKT----LEG 232
Query: 302 AGHWVHVDNPKGLLEIVA 319
GHW+H P IV+
Sbjct: 233 CGHWLHAQKPTIFNRIVS 250
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| TIGR_CMR|SO_2333 SO_2333 "hydrolase, alpha/beta fold family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 117 (46.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 50/198 (25%), Positives = 84/198 (42%)
Query: 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186
++GHSMGGK+A+ A +A P + ++ V + + V L+
Sbjct: 78 IVGHSMGGKIAMATA-----------LAYPNR--IISLVAADIAPVAYQPRHNAVFAALE 124
Query: 187 SLP-SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM 245
SLP R++ + H++ G + ++++ NL++SG W NL G + + Y +
Sbjct: 125 SLPLEGHTDRRFALAHLLAAGIDDATAQFLLKNLQRSGTGFRWKMNLTG---LKSGYPNI 181
Query: 246 SYWPLLEHPPQ----GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN 301
W L + PQ G + +R S+ R E L RQ ++ K L
Sbjct: 182 IGWHNLPNEPQLVFAGPSL-FIRGGDSNY--VAAAHRDEIL--RQFPQAQAKT----LEG 232
Query: 302 AGHWVHVDNPKGLLEIVA 319
GHW+H P IV+
Sbjct: 233 CGHWLHAQKPTIFNRIVS 250
|
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| FB|FBgn0029942 CG2059 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 91 (37.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 128 IGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187
+GHSMGG+ ++FA+ Y + V ++L V+D P + S GE+ ++ + S
Sbjct: 124 MGHSMGGRSMMYFARK-----YPELV---ERLIVVDISP--ISVPRSTGEMTEIFDAMVS 173
Query: 188 L---PS-SIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE--TWAFN---LDGAVQM 238
L PS S+ + + + ++I NL+K+ + +WA N L +
Sbjct: 174 LDLSPSMSMSEGRKIAREKLLKATEDETVDFIMLNLRKNPDTGAFSWACNAHVLREFLTR 233
Query: 239 FNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHV 298
F+ Y+ L E PP + +S + +++ + SE +H
Sbjct: 234 FDKYQSN----LEELPPYTGPTTFICGTRSPYMRREQWPQIQ----KMFPNSE----IHW 281
Query: 299 LPNAGHWVHVDNPKGLLEIVA 319
L +AGH VH + P+ L IV+
Sbjct: 282 L-DAGHLVHFEKPQEFLTIVS 301
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| ZFIN|ZDB-GENE-040909-1 abhd11 "abhydrolase domain containing 11" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 20 NSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNXXXXXXXXXXXXE 79
+S T S L Y+ D T F LHGL GS N+ S +++
Sbjct: 46 DSMRTASPVNLTYDVFDGKGDS--TPLVF-LHGLFGSKSNFHSIAKSLVQRTGR------ 96
Query: 80 WRMVLVDLRNHGRSAEIEGLDPPHDIXXXXXXXXXXXXXXGWDWPDVVIGHSMGGKVALH 139
+++ +D RNHG+S L +D G V+IGHSMGGKVA+
Sbjct: 97 -KVLTIDARNHGKSPHSPVLT--YDTMTSDLTHLLGQLHIG---KCVLIGHSMGGKVAMT 150
Query: 140 FAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP---SRK 196
A S L ++L V+D P + + ++ ++ +PS IP +R+
Sbjct: 151 TALSQPN--------LVERLVVVDISPSLTSAHTNFHAYIQAMKEVK-IPSDIPRSTARR 201
Query: 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLD 233
+ + ++ +S+ +++ TNL++ + W NL+
Sbjct: 202 LAEDQLRKIVKERSVRQFLLTNLEEQNGQYGWRINLE 238
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| TIGR_CMR|SPO_2943 SPO_2943 "hydrolase, alpha/beta fold family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/169 (28%), Positives = 72/169 (42%)
Query: 49 VLHGLLGSGRNWRSFSRNXXXXXXXXXXXXEWRMVLVDLRNHGRSAEIEGLDPPHDIXXX 108
+ HGL GSGRNW +R E +++ VD+RNHG S E PHD
Sbjct: 18 IAHGLYGSGRNWGVIARRLAD---------ERQVIAVDMRNHGHSPWAE----PHDYPAL 64
Query: 109 XXXXXXXXXXXGWDWPDVVIGHSMGGKVALHFA----QSCAR---ADYGQFVALPKQLWV 161
G D+ +GHSMGGK A+ A Q R AD Q+
Sbjct: 65 AADLADVIEAHGGR-ADL-LGHSMGGKAAMVLALTHGQLLRRLVVADIAPVTYSHSQMPF 122
Query: 162 LDSVPG----KVKTENSEGE------VEKVLQTLQSLPSSIPSRKWLVN 200
++++ G +V+ + E VEK LQ+ + +P ++W +N
Sbjct: 123 IEAMRGVDLSRVERRSDAEEMLAAQGVEKALQSFFTQSLDLPGKRWRLN 171
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| UNIPROTKB|F1PRS1 ABHD11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 95 (38.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 53/211 (25%), Positives = 83/211 (39%)
Query: 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNXXXXXXXXXXXXEWRMVLVDLRN 89
L+Y+ + + RP + F LHGL GS N+ S ++ R++ VD RN
Sbjct: 44 LSYKLLDGEAARP--ALVF-LHGLFGSKTNFNSIAKALAQQTGR-------RVLTVDARN 93
Query: 90 HGRSAEIEGLDPPHDIXXXXXXXXXXXXXXGWDWPDVVIGHSMGGKVALHFAQSCARADY 149
HG S P G P V+IGHSMGGK A+ A R +
Sbjct: 94 HGDSPH----SPEMSYEAMSQDLQDLLPQLGLV-PCVLIGHSMGGKTAMLLALQ--RPE- 145
Query: 150 GQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP---SRKWLVNHMMELG 206
L ++L +D P + T +S+ +P + +RK + +
Sbjct: 146 -----LVERLIAVDISPVET-TSSSDFPSYMAAMRAVDIPDEVSRSSARKLADEQLSTVI 199
Query: 207 FSKSLSEWIGTNLKKSGERETWAFNLDGAVQ 237
+ +++ TNL + R W NL+ Q
Sbjct: 200 QDMAERQFLLTNLVEVDGRFVWRVNLEALAQ 230
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| UNIPROTKB|F1RJM8 ABHD11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 96 (38.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 55/211 (26%), Positives = 86/211 (40%)
Query: 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNXXXXXXXXXXXXEWRMVLVDLRN 89
L+Y+ + RP F LHGL GS N+ S ++ R++ VD RN
Sbjct: 52 LSYKLLDGEVARP--PLVF-LHGLFGSKANFSSIAKALAQQTGR-------RVLTVDARN 101
Query: 90 HGRSAEIEGLDPPHDIXXXXXXXXXXXXXXGWDWPDVVIGHSMGGKVALHFAQSCARADY 149
HG S P G P V+IGHSMGGK A+ A R +
Sbjct: 102 HGDSPH----SPDMSYEAMSQDLQDLLPQLGLV-PCVLIGHSMGGKTAMLLALQ--RPE- 153
Query: 150 GQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS--SIPSRKWLVNHMMELGF 207
L ++L +D P + + ++ ++ + LP+ S+ S + L + +
Sbjct: 154 -----LVERLIAVDISPVESTSSSNFPNYVAAMKAID-LPNGASLSSARKLASEKLSSVI 207
Query: 208 -SKSLSEWIGTNLKKSGERETWAFNLDGAVQ 237
S S+ +++ TNL + W NLD Q
Sbjct: 208 QSISVRQFLLTNLVEVDGHFVWRVNLDALSQ 238
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00021578001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (331 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 325 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 3e-14 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 4e-14 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 1e-12 | |
| PRK11126 | 242 | PRK11126, PRK11126, 2-succinyl-6-hydroxy-2,4-cyclo | 4e-10 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-08 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 9e-08 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-07 | |
| PRK10673 | 255 | PRK10673, PRK10673, acyl-CoA esterase; Provisional | 9e-07 | |
| COG3208 | 244 | COG3208, GrsT, Predicted thioesterase involved in | 2e-06 | |
| PLN02980 | 1655 | PLN02980, PLN02980, 2-oxoglutarate decarboxylase/ | 5e-06 | |
| pfam07819 | 225 | pfam07819, PGAP1, PGAP1-like protein | 2e-04 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 6e-04 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 0.001 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 0.001 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 0.002 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 0.003 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 0.004 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 71.2 bits (173), Expect = 3e-14
Identities = 55/284 (19%), Positives = 94/284 (33%), Gaps = 36/284 (12%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG GS WR + L + ++ +R++ DLR HGRS + ++ A
Sbjct: 27 LHGFPGSSSVWRPVFKVLPA------LAARYRVIAPDLRGHGRSDP-----AGYSLSAYA 75
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+DLA L+ A G + V++GHSMGG VAL A + V VL
Sbjct: 76 DDLAALLDALGLE-KVVLVGHSMGGAVALALA-----LRHPDRVRG----LVLIGPAPPP 125
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPS------RKWLVNHMMELGFSKSLSEWIGTNLKKSG 223
+ L +L + L + + + + L+
Sbjct: 126 GLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPL 185
Query: 224 ERETWAFNLDGAVQMFNSYREMSYWPLL--EHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281
A A + L + I+ E ++ +RL
Sbjct: 186 LGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAA 245
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
+ V+P AGH+ H++ P+ + + +
Sbjct: 246 ALP-------NDARLVVIPGAGHFPHLEAPEAFAAALLAFLERL 282
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 4e-14
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG GS +WR + LA+ +R++ DL HG S P+ + + A
Sbjct: 4 LHGAGGSAESWRPLAEALAA---------GYRVLAPDLPGHGDSDGPP--RTPYSLEDDA 52
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
DLA L+ A G P V++GHS+GG VAL A
Sbjct: 53 ADLAALLDALGLG-PVVLVGHSLGGAVALAAAA 84
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 1e-12
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG LGSG +W++ L +R + +DL HG S ++ +D A
Sbjct: 8 LHGFLGSGADWQALIELLGPH---------FRCLAIDLPGHGSSQSPSDIER-YDFEEIA 57
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
L + + P ++G+SMGG++AL++A
Sbjct: 58 QLLLATLLDQLGIEPFFLVGYSMGGRIALYYA 89
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This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|236855 PRK11126, PRK11126, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 4e-10
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHGLLGSG++W+ L ++ + +DL HG SA I A+ +
Sbjct: 8 LHGLLGSGQDWQPVGEAL----------PDYPRLYIDLPGHGGSAAI----SVDGFADVS 53
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA-QSCAR 146
L+ +++ P ++G+S+GG++A+++A Q A
Sbjct: 54 RLLSQTLQSYN-ILPYWLVGYSLGGRIAMYYACQGLAG 90
|
Length = 242 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-08
Identities = 51/264 (19%), Positives = 81/264 (30%), Gaps = 63/264 (23%)
Query: 80 WRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALH 139
+ ++ DLR GRS + + A DL L+ A G D ++GHSMGG +AL
Sbjct: 1 FDVIAFDLRGFGRS-SPPKDFADYRFDDLAEDLEALLDALGLDKV-NLVGHSMGGLIALA 58
Query: 140 FAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199
+A A Y V K L ++ +V + L L
Sbjct: 59 YA-----AKYPDRV---KALVLVGTVHPAGLSSPLTPRGN--LLGLLL--------DNFF 100
Query: 200 NHMMELGFSKSLSEWIGT-----------NLKKSGERETWAFNLDGAVQMFNSYREMSYW 248
N + + L I LK+ F A+ Y
Sbjct: 101 NRLYD-SVEALLGRAIKQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDL 159
Query: 249 -------------PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVS 295
P L I+ + PD ++L L
Sbjct: 160 VWDRSAALKDIDVPTL----------IIWGDDDPLVPPDASEKLAALFP--------NAQ 201
Query: 296 VHVLPNAGHWVHVDNPKGLLEIVA 319
+ V+ +AGH ++ P + E++
Sbjct: 202 LVVIDDAGHLAQLEKPDEVAELIL 225
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 9e-08
Identities = 66/289 (22%), Positives = 109/289 (37%), Gaps = 57/289 (19%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
+LHG S +WR LA + +R+V DL HG + +
Sbjct: 30 LLLLLHGTGASTHSWRDLMPPLARS---------FRVVAPDLPGHGFTRAPFRFRF--TL 78
Query: 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165
+ A DL+ L A+G PD VIGHS G +AL A P+ + +++
Sbjct: 79 PSMAEDLSALCAAEGLS-PDGVIGHSAGAAIALRLALDGP--------VTPRMVVGINAA 129
Query: 166 PGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFS-----KSLSEWIGTNLK 220
EG + + + + P MM G + + L G+ L
Sbjct: 130 LM-----PFEGMAGTLFPYMARVLACNP----FTPPMMSRGAADQQRVERLIRDTGSLLD 180
Query: 221 KSGERETWAF-----NLDGAVQMFNSYREMSYW---PLLEHPPQ-GMEIAIVRAEKSDRW 271
K+G ++DGA+ M M+ W PL P+ + + ++ E+
Sbjct: 181 KAGMTYYGRLIRSPAHVDGALSM------MAQWDLAPLNRDLPRITIPLHLIAGEEDKAV 234
Query: 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
PD +R A R ++HV+P GH VH + G++ ++
Sbjct: 235 PPDESKR---AATRVPTA-----TLHVVPGGGHLVHEEQADGVVGLILQ 275
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 2e-07
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 22/94 (23%)
Query: 49 VLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108
+LHG G + +R LAS + +V VD HG S
Sbjct: 4 LLHGAGGDPEAYAPLARALAS--------RGYNVVAVDYPGHGASLG------------- 42
Query: 109 ANDLANLVKAKGWDWPDVVI-GHSMGGKVALHFA 141
A D ++ D +V+ GHS+GG VAL A
Sbjct: 43 APDAEAVLADAPLDPERIVLVGHSLGGGVALLLA 76
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|182637 PRK10673, PRK10673, acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 9e-07
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 38 SSDRPYTSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96
++ P+ ++ VL HGL GS N +R+L + + ++ VD+RNHG S
Sbjct: 9 TAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN---------DHDIIQVDMRNHGLSPR- 58
Query: 97 EGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVAL 138
DP + A DL + + A + IGHSMGGK +
Sbjct: 59 ---DPVMNYPAMAQDLLDTLDALQIE-KATFIGHSMGGKAVM 96
|
Length = 255 |
| >gnl|CDD|225749 COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 55 GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLAN 114
GS +RS+SR L ++ ++ V L GR G DI + A++LAN
Sbjct: 18 GSASLFRSWSRRL---------PADIELLAVQLP--GRGDRF-GEPLLTDIESLADELAN 65
Query: 115 LVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
+ D P + GHSMG +A A+ RA P+ L++
Sbjct: 66 ELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGL-----PPRALFISGCRA 112
|
Length = 244 |
| >gnl|CDD|215530 PLN02980, PLN02980, 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 67/300 (22%), Positives = 114/300 (38%), Gaps = 59/300 (19%)
Query: 35 VRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS- 93
V S LHG LG+G +W + S S+ R + +DL HG S
Sbjct: 1362 VHEVGQNAEGSVVLFLHGFLGTGEDW-------IPIMKAISGSA--RCISIDLPGHGGSK 1412
Query: 94 ----AEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADY 149
A+ +P + A+ L L++ ++G+SMG ++AL+ A
Sbjct: 1413 IQNHAKETQTEPTLSVELVADLLYKLIEHIT-PGKVTLVGYSMGARIALYMA-------- 1463
Query: 150 GQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSK 209
L D + G V S G ++V + ++S +R L++H +E+
Sbjct: 1464 ---------LRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRAR-MLIDHGLEI---- 1509
Query: 210 SLSEWIGTNLKKSGERETWAFN--------------LDGAVQMFNSYREMSYWPLLEHPP 255
L W L KS R FN L + + R+ S W L+
Sbjct: 1510 FLENWYSGELWKS-LRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQ-- 1566
Query: 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQ----GDGSEGKVSVHVLPNAGHWVHVDNP 311
+ +V EK ++ + Q++ + D + + + +PN GH VH++NP
Sbjct: 1567 CDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENP 1625
|
Length = 1655 |
| >gnl|CDD|203773 pfam07819, PGAP1, PGAP1-like protein | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 10/95 (10%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN-----HGRSAEIEGLDPPHD 104
+ G GS + RS + VD HGR+ LD
Sbjct: 10 IPGNAGSYKQVRSIASVALRKAELNDNGFHLDFFSVDFNEELSAFHGRTL----LDQAEY 65
Query: 105 IANAANDLANLVKAKGWDWPDVV-IGHSMGGKVAL 138
+ +A + +L + V+ IGHSMGG VA
Sbjct: 66 LNDAIRYILSLYNSNRPPPTSVILIGHSMGGLVAR 100
|
The sequences found in this family are similar to PGAP1. This is an endoplasmic reticulum membrane protein with a catalytic serine containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body. Length = 225 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 52 GLLGSGRNWRSFSRNLASTLSQTSA-SSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAN 110
GL GSG W Q + + + +V D R GRS L P + IA+ A+
Sbjct: 20 GLGGSGSYW----------APQLAVLTQRFHVVTYDHRGTGRSPGE--LPPDYSIAHMAD 67
Query: 111 DLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
D+ L+ A G + V GH++GG + L A
Sbjct: 68 DVLQLLDALGIERFHFV-GHALGGLIGLQLA 97
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 77 SSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKV 136
S+ + + LVDL HGRS P +A+AA +A P + +G S+GG V
Sbjct: 28 SAHFTLHLVDLPGHGRSRGFG----PLSLADAAEAIAAQA-----PDPAIWLGWSLGGLV 78
Query: 137 ALHFA 141
ALH A
Sbjct: 79 ALHIA 83
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 55 GSGRNWRSFSRNLASTLS----QTSA-SSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
G F +L + L A + ++R++ D R HG S EG P+ I + A
Sbjct: 10 ADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEG---PYSIEDLA 66
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+D+ L+ G + V G S+GG +A A
Sbjct: 67 DDVLALLDHLGIE-RAVFCGLSLGGLIAQGLA 97
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.002
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)
Query: 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEI 317
+ ++ E P+ +RL + VLP AGH H+++P+ + E
Sbjct: 138 VLVIHGEDDPLVPPEAARRLAEAL--------PGAELVVLPGAGHLPHLEHPEEVAEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 86 DLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD---VVIGHSMGGKVALHFAQ 142
DLR HGRS + A+ +DL V+ P ++GHSMGG +AL +
Sbjct: 68 DLRGHGRSPRGQ-RGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLA 126
|
Length = 298 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
++HG G NW + + ++ ++ +DL HG S++ G +
Sbjct: 133 PVVLIHGFGGDLNNWL---------FNHAALAAGRPVIALDLPGHGASSKAVG---AGSL 180
Query: 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143
A + + A G + +V GHSMGG VAL A
Sbjct: 181 DELAAAVLAFLDALGIERAHLV-GHSMGGAVALRLAAR 217
|
Length = 371 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 325 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 100.0 | |
| PRK07581 | 339 | hypothetical protein; Validated | 100.0 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 100.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 100.0 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.98 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.98 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.96 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.96 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.96 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.96 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.96 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.96 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.96 | |
| PLN02511 | 388 | hydrolase | 99.95 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.95 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.94 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.94 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.94 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.92 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.91 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.91 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.9 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.9 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.9 | |
| PRK10566 | 249 | esterase; Provisional | 99.89 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.89 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.89 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.87 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.87 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.86 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.86 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.84 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.83 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.82 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.81 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.81 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.8 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.79 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.79 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.78 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.78 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.78 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.76 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.75 | |
| PLN00021 | 313 | chlorophyllase | 99.74 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.73 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.73 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.71 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.7 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.68 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.66 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.65 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.64 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.64 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.6 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.6 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.59 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.59 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.59 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.57 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.56 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.55 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.55 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.54 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.54 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.54 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.54 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.53 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.51 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.5 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.48 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.47 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.43 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.39 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.38 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.38 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.37 | |
| PRK10115 | 686 | protease 2; Provisional | 99.37 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.35 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.34 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.32 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.29 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.28 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.27 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.27 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.26 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.25 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.24 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.21 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.19 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.19 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.18 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.16 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.15 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.13 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.11 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.07 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.03 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.0 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.0 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.0 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.97 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.9 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.9 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.89 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.89 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.87 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.86 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.85 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.83 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.82 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.8 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.77 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.75 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.7 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.69 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 98.69 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.68 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.66 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.64 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.62 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.62 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.61 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.6 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.5 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.49 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.48 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.46 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.41 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.41 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.32 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.3 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.28 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.28 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.24 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.24 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.18 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.16 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.13 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.1 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.04 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.03 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.96 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.86 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.84 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.82 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.72 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.67 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.65 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.64 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.62 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.47 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.46 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.39 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.39 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.28 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.25 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.16 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.14 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.09 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.03 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.03 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.0 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.0 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.93 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.92 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.91 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.84 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 96.79 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.75 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.69 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.68 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.62 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.5 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.42 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.41 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.39 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.38 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.3 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.26 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.24 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.11 | |
| PLN02408 | 365 | phospholipase A1 | 95.98 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 95.86 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.8 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.61 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 95.57 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.52 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.42 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.29 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.22 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 95.17 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.16 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.1 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.06 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.91 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 94.75 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 94.69 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 94.13 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.09 | |
| PLN02847 | 633 | triacylglycerol lipase | 93.92 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 93.34 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 93.11 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 91.33 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 90.74 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 90.56 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 90.3 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 89.08 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 89.08 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 88.03 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 87.29 | |
| PLN02209 | 437 | serine carboxypeptidase | 87.04 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 86.62 | |
| ) proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor" target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF06309">PF06309 | 127 | Torsin: Torsin; InterPro: IPR010448 This family co | 84.3 | |
| PF00698 | 318 | Acyl_transf_1: Acyl transferase domain; InterPro: | 81.26 | |
| smart00827 | 298 | PKS_AT Acyl transferase domain in polyketide synth | 80.44 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=256.47 Aligned_cols=263 Identities=17% Similarity=0.187 Sum_probs=171.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC----CC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL----DP 101 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~----~~ 101 (325)
++.+++|...|++ +++|||+||+++++..|..+++.|+ +.|+|+++|+||||.|+.+... ..
T Consensus 16 ~~~~i~y~~~G~~-----~~~vlllHG~~~~~~~w~~~~~~L~---------~~~~vi~~DlpG~G~S~~~~~~~~~~~~ 81 (294)
T PLN02824 16 KGYNIRYQRAGTS-----GPALVLVHGFGGNADHWRKNTPVLA---------KSHRVYAIDLLGYGYSDKPNPRSAPPNS 81 (294)
T ss_pred cCeEEEEEEcCCC-----CCeEEEECCCCCChhHHHHHHHHHH---------hCCeEEEEcCCCCCCCCCCccccccccc
Confidence 5778999998752 5799999999999999999999998 5679999999999999876421 13
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 102 PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
.++++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+...............
T Consensus 82 ~~~~~~~a~~l~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lili~~~~~~~~~~~~~~~~~~~ 152 (294)
T PLN02824 82 FYTFETWGEQLNDFCSDVVGD-PAFVICNSVGGVVGLQAAVDAPE--------LVRGVMLINISLRGLHIKKQPWLGRPF 152 (294)
T ss_pred cCCHHHHHHHHHHHHHHhcCC-CeEEEEeCHHHHHHHHHHHhChh--------heeEEEEECCCcccccccccchhhhHH
Confidence 689999999999999999998 99999999999999999999999 999999999764322111110001111
Q ss_pred HHHhhcCCCC-CCcHH--------HHHHHHHhhccc---hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 182 LQTLQSLPSS-IPSRK--------WLVNHMMELGFS---KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 182 ~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
...+...... ..... .....+....+. ....+.+......... .........+...........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN02824 153 IKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE----PGAVDVFLDFISYSGGPLPEE 228 (294)
T ss_pred HHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC----chHHHHHHHHhccccccchHH
Confidence 1111100000 00000 000011000000 0000000000000000 000111111111111111123
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+.+++ +|+++|+|++|..++.+..+.+.+..+. +++++++++||++++|+|++|++.|.+|++++
T Consensus 229 ~l~~i~--~P~lvi~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 229 LLPAVK--CPVLIAWGEKDPWEPVELGRAYANFDAV--------EDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HHhhcC--CCeEEEEecCCCCCChHHHHHHHhcCCc--------cceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 345554 8999999999999998877777665554 89999999999999999999999999999864
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=256.26 Aligned_cols=264 Identities=19% Similarity=0.208 Sum_probs=168.7
Q ss_pred cc-ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 27 LQ-TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 27 ~~-~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
|. +++|.+.|++...+++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.. ..+++
T Consensus 70 g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~---------~~~~via~Dl~G~G~S~~~~~--~~~~~ 138 (360)
T PLN02679 70 GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLA---------KNYTVYAIDLLGFGASDKPPG--FSYTM 138 (360)
T ss_pred CceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEECCCCCCCCCCCCC--ccccH
Confidence 45 8999998864223356899999999999999999999888 689999999999999988654 47899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH-ccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH----
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS-CARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK---- 180 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~---- 180 (325)
+++++++.+++++++.+ +++|+||||||.+++.++.+ +|+ +|+++|++++................
T Consensus 139 ~~~a~~l~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~P~--------rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~ 209 (360)
T PLN02679 139 ETWAELILDFLEEVVQK-PTVLIGNSVGSLACVIAASESTRD--------LVRGLVLLNCAGGMNNKAVVDDWRIKLLLP 209 (360)
T ss_pred HHHHHHHHHHHHHhcCC-CeEEEEECHHHHHHHHHHHhcChh--------hcCEEEEECCccccccccccchHHHhhhcc
Confidence 99999999999999999 99999999999999999875 799 99999999986432211110000000
Q ss_pred ---HHHHhhcCCC-------CCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC
Q 020518 181 ---VLQTLQSLPS-------SIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE 244 (325)
Q Consensus 181 ---~~~~~~~~~~-------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (325)
....+...+. ...... ....+.... ......+....... .......+.........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 281 (360)
T PLN02679 210 LLWLIDFLLKQRGIASALFNRVKQRD-NLKNILLSVYGNKEAVDDELVEIIRGPAD-------DEGALDAFVSIVTGPPG 281 (360)
T ss_pred hHHHHHHHhhchhhHHHHHHHhcCHH-HHHHHHHHhccCcccCCHHHHHHHHhhcc-------CCChHHHHHHHHhcCCC
Confidence 0000000000 000000 000000000 00000010000000 00001112222211112
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChHH--HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV--IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.+....+.+++ +|+++|+|++|..++++. .+.+.++....++ ++++++++|||++++|+|++|++.|.+||
T Consensus 282 ~~~~~~l~~i~--~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-----~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 282 PNPIKLIPRIS--LPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-----VTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred CCHHHHhhhcC--CCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-----eEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 22234455554 899999999999988763 1222333333332 89999999999999999999999999999
Q ss_pred hcC
Q 020518 323 ASV 325 (325)
Q Consensus 323 ~~~ 325 (325)
+++
T Consensus 355 ~~~ 357 (360)
T PLN02679 355 AQL 357 (360)
T ss_pred Hhc
Confidence 764
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=246.39 Aligned_cols=260 Identities=17% Similarity=0.199 Sum_probs=166.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|.+.|. +++|||+||++++...|..+++.|.+ .++|+++|+||||.|+.+. ..+++
T Consensus 15 ~g~~i~y~~~G~------g~~vvllHG~~~~~~~w~~~~~~L~~---------~~~via~D~~G~G~S~~~~---~~~~~ 76 (295)
T PRK03592 15 LGSRMAYIETGE------GDPIVFLHGNPTSSYLWRNIIPHLAG---------LGRCLAPDLIGMGASDKPD---IDYTF 76 (295)
T ss_pred CCEEEEEEEeCC------CCEEEEECCCCCCHHHHHHHHHHHhh---------CCEEEEEcCCCCCCCCCCC---CCCCH
Confidence 678899999874 57999999999999999999999984 5699999999999998875 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++|+.+++++++.+ +++++||||||.+|+.+|.++|+ +|+++|++++....................+
T Consensus 77 ~~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 147 (295)
T PRK03592 77 ADHARYLDAWFDALGLD-DVVLVGHDWGSALGFDWAARHPD--------RVRGIAFMEAIVRPMTWDDFPPAVRELFQAL 147 (295)
T ss_pred HHHHHHHHHHHHHhCCC-CeEEEEECHHHHHHHHHHHhChh--------heeEEEEECCCCCCcchhhcchhHHHHHHHH
Confidence 99999999999999998 99999999999999999999999 9999999997432211111111112222222
Q ss_pred hcCC--CC-CCcHHHHHHHHHhhc----cchhHHHHHhhcccCCCcccccccChhHHHHhhhc-c------cCCcccccc
Q 020518 186 QSLP--SS-IPSRKWLVNHMMELG----FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-Y------REMSYWPLL 251 (325)
Q Consensus 186 ~~~~--~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~ 251 (325)
.... .. ......+........ ........+......... .............. . ...+....+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPES---RRPTLSWPRELPIDGEPADVVALVEEYAQWL 224 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchh---hhhhhhhhhhcCCCCcchhhHhhhhHhHHHh
Confidence 1110 00 000011111111110 000000000100000000 00000000000000 0 000111223
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.++ ++|+++|+|++|..+++... +.+.+..++ +++++++++||++++|+|+++++.|.+|++++
T Consensus 225 ~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 225 ATS--DVPKLLINAEPGAILTTGAIRDWCRSWPNQ--------LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred ccC--CCCeEEEeccCCcccCcHHHHHHHHHhhhh--------cceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 444 48999999999999955444 444445555 89999999999999999999999999999763
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=247.13 Aligned_cols=277 Identities=14% Similarity=0.094 Sum_probs=172.6
Q ss_pred ccccccccccCCccccc-cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 11 SLNLLTRFLNSPTTRSL-QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
..+...++++.....++ .+++|.+.|.+ ++++|||+||++++...|..+++.|.+ +||+|+++|+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~G~~----~~~~lvliHG~~~~~~~w~~~~~~L~~--------~gy~vi~~Dl~G 83 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDEGPA----DGPPVLLLHGEPSWSYLYRKMIPILAA--------AGHRVIAPDLIG 83 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEecCCC----CCCEEEEECCCCCchhhHHHHHHHHHh--------CCCEEEEECCCC
Confidence 33444444544433333 57999998753 468999999999999999999999986 789999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 90 HGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 90 ~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
||.|+.+... ..++++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.....
T Consensus 84 ~G~S~~~~~~-~~~~~~~~a~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~ 153 (302)
T PRK00870 84 FGRSDKPTRR-EDYTYARHVEWMRSWFEQLDLT-DVTLVCQDWGGLIGLRLAAEHPD--------RFARLVVANTGLPTG 153 (302)
T ss_pred CCCCCCCCCc-ccCCHHHHHHHHHHHHHHcCCC-CEEEEEEChHHHHHHHHHHhChh--------heeEEEEeCCCCCCc
Confidence 9999876421 3589999999999999999999 99999999999999999999999 999999998642211
Q ss_pred CCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhc-------c
Q 020518 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-------Y 242 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 242 (325)
.. ........+.......+. ......................+....... .+............. .
T Consensus 154 ~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T PRK00870 154 DG-PMPDAFWAWRAFSQYSPV--LPVGRLVNGGTVRDLSDAVRAAYDAPFPDE----SYKAGARAFPLLVPTSPDDPAVA 226 (302)
T ss_pred cc-cchHHHhhhhcccccCch--hhHHHHhhccccccCCHHHHHHhhcccCCh----hhhcchhhhhhcCCCCCCCcchH
Confidence 10 001111111111000000 000000000000000100000000000000 000000000000000 0
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.....+..+.+++ +|+++|+|++|..+++.. +.+.+.+++... ..+++++++||++++|+|++|++.|.+||
T Consensus 227 ~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~-----~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 298 (302)
T PRK00870 227 ANRAAWAVLERWD--KPFLTAFSDSDPITGGGD-AILQKRIPGAAG-----QPHPTIKGAGHFLQEDSGEELAEAVLEFI 298 (302)
T ss_pred HHHHHHHhhhcCC--CceEEEecCCCCcccCch-HHHHhhcccccc-----cceeeecCCCccchhhChHHHHHHHHHHH
Confidence 0001122344444 899999999999998765 667777665111 23889999999999999999999999999
Q ss_pred hc
Q 020518 323 AS 324 (325)
Q Consensus 323 ~~ 324 (325)
+.
T Consensus 299 ~~ 300 (302)
T PRK00870 299 RA 300 (302)
T ss_pred hc
Confidence 75
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=243.48 Aligned_cols=254 Identities=13% Similarity=0.146 Sum_probs=168.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...+.+ +++++|||+||++++...|..+++.|. ++|+|+++|+||||.|..+. ..+++
T Consensus 10 ~~~~~~~~~~~~~---~~~~plvllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~---~~~~~ 74 (276)
T TIGR02240 10 DGQSIRTAVRPGK---EGLTPLLIFNGIGANLELVFPFIEALD---------PDLEVIAFDVPGVGGSSTPR---HPYRF 74 (276)
T ss_pred CCcEEEEEEecCC---CCCCcEEEEeCCCcchHHHHHHHHHhc---------cCceEEEECCCCCCCCCCCC---CcCcH
Confidence 5678999775321 235799999999999999999999887 67999999999999998764 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++.+++++++++ +++|+||||||.+++.+|.++|+ +|+++|+++++............... ....
T Consensus 75 ~~~~~~~~~~i~~l~~~-~~~LvG~S~GG~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~ 144 (276)
T TIGR02240 75 PGLAKLAARMLDYLDYG-QVNAIGVSWGGALAQQFAHDYPE--------RCKKLILAATAAGAVMVPGKPKVLMM-MASP 144 (276)
T ss_pred HHHHHHHHHHHHHhCcC-ceEEEEECHHHHHHHHHHHHCHH--------HhhheEEeccCCccccCCCchhHHHH-hcCc
Confidence 99999999999999999 99999999999999999999999 99999999987643211111111000 0000
Q ss_pred hcCCCCCCcHHHHHHHHHhhcc--chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 186 QSLPSSIPSRKWLVNHMMELGF--SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
........... .......... .............. .. ............ ..+....+.+++ +|+++|
T Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~-~~~~~~~l~~i~--~P~lii 213 (276)
T TIGR02240 145 RRYIQPSHGIH-IAPDIYGGAFRRDPELAMAHASKVRS---GG----KLGYYWQLFAGL-GWTSIHWLHKIQ--QPTLVL 213 (276)
T ss_pred hhhhccccccc-hhhhhccceeeccchhhhhhhhhccc---CC----CchHHHHHHHHc-CCchhhHhhcCC--CCEEEE
Confidence 00000000000 0000000000 00000000000000 00 000111111111 111223345554 899999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|++|.+++++..+.+.+.+++ ++++++++ ||++++|+|+++++.|.+|+++
T Consensus 214 ~G~~D~~v~~~~~~~l~~~~~~--------~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 214 AGDDDPIIPLINMRLLAWRIPN--------AELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred EeCCCCcCCHHHHHHHHHhCCC--------CEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 9999999999888888877765 89999986 9999999999999999999975
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=234.54 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=170.7
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
++.|+.+++ .+..++|+|||+||++++...|..++..|. ++|+|+++|+||||.|..+ ..++++++
T Consensus 2 ~~~~~~~~~-~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~s~~~----~~~~~~~~ 67 (255)
T PRK10673 2 KLNIRAQTA-QNPHNNSPIVLVHGLFGSLDNLGVLARDLV---------NDHDIIQVDMRNHGLSPRD----PVMNYPAM 67 (255)
T ss_pred cceeeeccC-CCCCCCCCEEEECCCCCchhHHHHHHHHHh---------hCCeEEEECCCCCCCCCCC----CCCCHHHH
Confidence 456666554 223568999999999999999999999988 6899999999999999875 45899999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++|+.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+......... ........+..
T Consensus 68 ~~d~~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~- 136 (255)
T PRK10673 68 AQDLLDTLDALQIE-KATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDIAPVDYHVRRHD-EIFAAINAVSE- 136 (255)
T ss_pred HHHHHHHHHHcCCC-ceEEEEECHHHHHHHHHHHhCHh--------hcceEEEEecCCCCccchhhH-HHHHHHHHhhh-
Confidence 99999999999998 99999999999999999999999 999999998765332111111 11111111100
Q ss_pred CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCC
Q 020518 189 PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
............+...........+........ .+..........+. ....+..+..+ ++|+++|+|++|
T Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~--~~P~l~i~G~~D 206 (255)
T PRK10673 137 -AGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDG----EWRFNVPVLWDQYP---HIVGWEKIPAW--PHPALFIRGGNS 206 (255)
T ss_pred -cccccHHHHHHHHHHhcCCHHHHHHHHhcCCcc----eeEeeHHHHHHhHH---HHhCCcccCCC--CCCeEEEECCCC
Confidence 011111111111111111111122222111110 11111111111111 11112233333 389999999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++++..+.+.+..++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 207 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 207 PYVTEAYRDDLLAQFPQ--------ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCHHHHHHHHHhCCC--------cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999888888887776 8999999999999999999999999999974
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=231.88 Aligned_cols=262 Identities=17% Similarity=0.149 Sum_probs=173.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|.+.|+ +++|.|+++||++.++.+|+.++..|+. .||+|+|+|+||+|.|+.|... ..|++
T Consensus 30 ~gI~~h~~e~g~----~~gP~illlHGfPe~wyswr~q~~~la~--------~~~rviA~DlrGyG~Sd~P~~~-~~Yt~ 96 (322)
T KOG4178|consen 30 KGIRLHYVEGGP----GDGPIVLLLHGFPESWYSWRHQIPGLAS--------RGYRVIAPDLRGYGFSDAPPHI-SEYTI 96 (322)
T ss_pred ccEEEEEEeecC----CCCCEEEEEccCCccchhhhhhhhhhhh--------cceEEEecCCCCCCCCCCCCCc-ceeeH
Confidence 557888888876 3689999999999999999999999997 7899999999999999998864 68999
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
..++.|+..++++++.+ +++++||+||+++|+.+|..+|+ +|+++|.++.+......+.............
T Consensus 97 ~~l~~di~~lld~Lg~~-k~~lvgHDwGaivaw~la~~~Pe--------rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~ 167 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLK-KAFLVGHDWGAIVAWRLALFYPE--------RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSY 167 (322)
T ss_pred HHHHHHHHHHHHHhccc-eeEEEeccchhHHHHHHHHhChh--------hcceEEEecCCCCCcccchhhhhccccCccc
Confidence 99999999999999999 99999999999999999999999 9999999998755111111000000000000
Q ss_pred hcCCCCCCc----------HHHHHHHHHhhcc------c-----------hhHHHHHhhcccCCCcccccccChhHHHHh
Q 020518 186 QSLPSSIPS----------RKWLVNHMMELGF------S-----------KSLSEWIGTNLKKSGERETWAFNLDGAVQM 238 (325)
Q Consensus 186 ~~~~~~~~~----------~~~~~~~~~~~~~------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (325)
.....+.+. .+.+...+..... . ....+.....+. .....-....+..+
T Consensus 168 y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~----~~g~~gplNyyrn~ 243 (322)
T KOG4178|consen 168 YICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQ----IDGFTGPLNYYRNF 243 (322)
T ss_pred eeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccc----cccccccchhhHHH
Confidence 000000000 0000000000000 0 000001111110 00011112222222
Q ss_pred hhcccCCcccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHH
Q 020518 239 FNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEI 317 (325)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 317 (325)
.+... .....+..+. +|+++|+|+.|.+.+.. ..+...+.++++ .+.++++++||++++|+|+++++.
T Consensus 244 ~r~w~--a~~~~~~~i~--iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l-------~~~vv~~~~gH~vqqe~p~~v~~~ 312 (322)
T KOG4178|consen 244 RRNWE--AAPWALAKIT--IPVLFIWGDLDPVLPYPIFGELYRKDVPRL-------TERVVIEGIGHFVQQEKPQEVNQA 312 (322)
T ss_pred hhCch--hccccccccc--cceEEEEecCcccccchhHHHHHHHhhccc-------cceEEecCCcccccccCHHHHHHH
Confidence 22211 1122333343 89999999999988765 455566666652 478899999999999999999999
Q ss_pred HHHHHhc
Q 020518 318 VAPRIAS 324 (325)
Q Consensus 318 i~~fl~~ 324 (325)
|.+|+++
T Consensus 313 i~~f~~~ 319 (322)
T KOG4178|consen 313 ILGFINS 319 (322)
T ss_pred HHHHHHh
Confidence 9999975
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=237.64 Aligned_cols=248 Identities=19% Similarity=0.216 Sum_probs=161.9
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.++|..+|.+ .|+|||+||+++++..|..+++.|. ++|+|+++|+||||.|..+ ..++++++
T Consensus 3 ~~~y~~~G~g-----~~~ivllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~----~~~~~~~~ 64 (256)
T PRK10349 3 NIWWQTKGQG-----NVHLVLLHGWGLNAEVWRCIDEELS---------SHFTLHLVDLPGFGRSRGF----GALSLADM 64 (256)
T ss_pred ccchhhcCCC-----CCeEEEECCCCCChhHHHHHHHHHh---------cCCEEEEecCCCCCCCCCC----CCCCHHHH
Confidence 4677777752 3579999999999999999999998 6799999999999999864 35788888
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++++.+ ++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+..................+...
T Consensus 65 ~~~l~~----~~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (256)
T PRK10349 65 AEAVLQ----QAPD-KAIWLGWSLGGLVASQIALTHPE--------RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQ 131 (256)
T ss_pred HHHHHh----cCCC-CeEEEEECHHHHHHHHHHHhChH--------hhheEEEecCccceecCCCCCcccHHHHHHHHHH
Confidence 877654 5667 99999999999999999999999 9999999998654321111111111111111000
Q ss_pred CCCCCcHHHHHHHHHhh-cc-----chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 189 PSSIPSRKWLVNHMMEL-GF-----SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
... ........+... .. ......+.......... ...........+...+....+..++ +|+++
T Consensus 132 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~i~--~P~li 201 (256)
T PRK10349 132 LSD--DFQRTVERFLALQTMGTETARQDARALKKTVLALPMP------EVDVLNGGLEILKTVDLRQPLQNVS--MPFLR 201 (256)
T ss_pred HHh--chHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCC------cHHHHHHHHHHHHhCccHHHHhhcC--CCeEE
Confidence 000 000011111100 00 00111111100000000 0111111111222334445566555 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
|+|++|.+++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+|-++|
T Consensus 202 i~G~~D~~~~~~~~~~~~~~i~~--------~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~~ 256 (256)
T PRK10349 202 LYGYLDGLVPRKVVPMLDKLWPH--------SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (256)
T ss_pred EecCCCccCCHHHHHHHHHhCCC--------CeEEEeCCCCCCccccCHHHHHHHHHHHhccC
Confidence 99999999998888877777766 99999999999999999999999999997664
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=235.36 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=157.8
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
.|||+||++.+...|..+++.|.+ .+|+|+++|+||||.|..+.. ..++++++++|+.+++++++..+++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~--------~~~~via~Dl~G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l~~~~~~ 74 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDA--------AGFKSTCVDLTGAGISLTDSN--TVSSSDQYNRPLFALLSDLPPDHKV 74 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhh--------CCceEEEecCCcCCCCCCCcc--ccCCHHHHHHHHHHHHHhcCCCCCE
Confidence 599999999999999999999965 789999999999999986543 4688999999999999999863399
Q ss_pred EEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC-----CC--CCCc----
Q 020518 126 VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL-----PS--SIPS---- 194 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~---- 194 (325)
+++||||||.+++.+|.++|+ +|+++|++++........ ............... .. ....
T Consensus 75 ~lvGhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCKFTD--------KISMAIYVAAAMVKPGSI-ISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIM 145 (255)
T ss_pred EEEecCcchHHHHHHHHhCch--------heeEEEEEccccCCCCCC-ccHHHHhhhhccccceeeeeccCCCCCcchhh
Confidence 999999999999999999999 999999999863211111 011111101000000 00 0000
Q ss_pred -HHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCCh
Q 020518 195 -RKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP 273 (325)
Q Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 273 (325)
...................+......... ..... ... +....+..+ ++|+++|+|++|..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~~--~~~~~~~~i--~vP~lvi~g~~D~~~~~ 209 (255)
T PLN02965 146 MKPEFVRHYYYNQSPLEDYTLSSKLLRPAP--------VRAFQ----DLD--KLPPNPEAE--KVPRVYIKTAKDNLFDP 209 (255)
T ss_pred cCHHHHHHHHhcCCCHHHHHHHHHhcCCCC--------Ccchh----hhh--hccchhhcC--CCCEEEEEcCCCCCCCH
Confidence 00010000000000000000000000000 00000 000 111122233 48999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 274 DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
...+.+.+.+++ ++++++++|||++++|+|++|++.|.+|++++
T Consensus 210 ~~~~~~~~~~~~--------a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 210 VRQDVMVENWPP--------AQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHhCCc--------ceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 988888887776 89999999999999999999999999999764
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=224.24 Aligned_cols=269 Identities=35% Similarity=0.562 Sum_probs=226.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+-.++.|..+....+-...|+++++||+.++...|..+...|+..+ +..|+++|.|.||.|... ...+.
T Consensus 34 ~p~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l-------~~~v~~vd~RnHG~Sp~~----~~h~~ 102 (315)
T KOG2382|consen 34 GPVRLAYDSVYSSENLERAPPAIILHGLLGSKENWRSVAKNLSRKL-------GRDVYAVDVRNHGSSPKI----TVHNY 102 (315)
T ss_pred CCcccceeeeecccccCCCCceEEecccccCCCCHHHHHHHhcccc-------cCceEEEecccCCCCccc----cccCH
Confidence 3467888876444444568999999999999999999999999865 559999999999999987 46779
Q ss_pred HHHHHHHHHHHHHhC----CCCCEEEEEeChhH-HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 106 ANAANDLANLVKAKG----WDWPDVVIGHSMGG-KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg-~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+++++|+..|++..+ .. +++++|||||| .+++..+..+|+ .+.++|+++.+|.. ..........
T Consensus 103 ~~ma~dv~~Fi~~v~~~~~~~-~~~l~GHsmGG~~~~m~~t~~~p~--------~~~rliv~D~sP~~--~~~~~~e~~e 171 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGGSTRLD-PVVLLGHSMGGVKVAMAETLKKPD--------LIERLIVEDISPGG--VGRSYGEYRE 171 (315)
T ss_pred HHHHHHHHHHHHHcccccccC-CceecccCcchHHHHHHHHHhcCc--------ccceeEEEecCCcc--CCcccchHHH
Confidence 999999999999885 45 99999999999 888889999999 99999999988763 3334445556
Q ss_pred HHHHhhcCCCC---CCcHHHHHHHHHhhccchhHHHHHhhccc--CCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 181 VLQTLQSLPSS---IPSRKWLVNHMMELGFSKSLSEWIGTNLK--KSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 181 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
.+..+...... ...+.+....+........+.+|+..++. .......|.++.......+..+....++..+...+
T Consensus 172 ~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~ 251 (315)
T KOG2382|consen 172 LIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGP 251 (315)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccc
Confidence 66666655554 57778888888888888888899999887 55667789999999999988877777777776655
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...||++|.|.++..++.+....+.+.++. ++++.+++||||+|.|+|++|.+.|.+|+..
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~--------~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKIFPN--------VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHhccc--------hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 568999999999999999989999999988 9999999999999999999999999999864
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=237.33 Aligned_cols=252 Identities=18% Similarity=0.204 Sum_probs=163.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|...|. +++|||+||++.+...|..+++.|. ++|+|+++|+||||.|+.+.. ..+++
T Consensus 22 ~~~~i~y~~~G~------~~~iv~lHG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~~~ 84 (286)
T PRK03204 22 SRGRIHYIDEGT------GPPILLCHGNPTWSFLYRDIIVALR---------DRFRCVAPDYLGFGLSERPSG--FGYQI 84 (286)
T ss_pred CCcEEEEEECCC------CCEEEEECCCCccHHHHHHHHHHHh---------CCcEEEEECCCCCCCCCCCCc--cccCH
Confidence 457899998774 6799999999998889999999888 679999999999999987654 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++.+++++++.+ +++++||||||.+++.++.++|+ +|+++|++++..... .... ......+
T Consensus 85 ~~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~-~~~~----~~~~~~~ 150 (286)
T PRK03204 85 DEHARVIGEFVDHLGLD-RYLSMGQDWGGPISMAVAVERAD--------RVRGVVLGNTWFWPA-DTLA----MKAFSRV 150 (286)
T ss_pred HHHHHHHHHHHHHhCCC-CEEEEEECccHHHHHHHHHhChh--------heeEEEEECccccCC-Cchh----HHHHHHH
Confidence 99999999999999998 99999999999999999999999 999999987643111 0000 0111111
Q ss_pred h-cCCCC--CCcHHHHHHHHHhhc----cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC-----CcccccccC
Q 020518 186 Q-SLPSS--IPSRKWLVNHMMELG----FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE-----MSYWPLLEH 253 (325)
Q Consensus 186 ~-~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 253 (325)
. ..... ..........+.... .......+........ .. ......+...+.. ......+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T PRK03204 151 MSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNA----AA---RRGVAEMPKQILAARPLLARLAREVPA 223 (286)
T ss_pred hccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCH----HH---HHHHHHHHHhcchhhHHHHHhhhhhhh
Confidence 0 00000 000000111111100 0000011110000000 00 0000000000000 000011111
Q ss_pred CCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 254 PPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
...++|+++|+|++|..+++. ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||.
T Consensus 224 ~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~--------~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 224 TLGTKPTLLVWGMKDVAFRPKTILPRLRATFPD--------HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hcCCCCeEEEecCCCcccCcHHHHHHHHHhcCC--------CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 112589999999999988664 46777777776 899999999999999999999999999973
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=240.85 Aligned_cols=257 Identities=16% Similarity=0.229 Sum_probs=168.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.|.+++|.+.|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..++.
T Consensus 74 ~~~~i~Y~~~g~------g~~vvliHG~~~~~~~w~~~~~~l~---------~~~~v~~~D~~G~G~S~~~~---~~~~~ 135 (354)
T PLN02578 74 RGHKIHYVVQGE------GLPIVLIHGFGASAFHWRYNIPELA---------KKYKVYALDLLGFGWSDKAL---IEYDA 135 (354)
T ss_pred CCEEEEEEEcCC------CCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEECCCCCCCCCCcc---cccCH
Confidence 467889988764 5789999999999999999999998 67999999999999999875 57899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch--------hH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE--------GE 177 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~--------~~ 177 (325)
+.+++++.++++++..+ +++++||||||.+++.+|.++|+ +|+++|++++++......... ..
T Consensus 136 ~~~a~~l~~~i~~~~~~-~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~ 206 (354)
T PLN02578 136 MVWRDQVADFVKEVVKE-PAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNSAGQFGSESREKEEAIVVEETV 206 (354)
T ss_pred HHHHHHHHHHHHHhccC-CeEEEEECHHHHHHHHHHHhChH--------hcceEEEECCCccccccccccccccccccch
Confidence 99999999999999988 99999999999999999999999 999999998765332111000 00
Q ss_pred HHH-HHHHhh----cCC-----CCCCcHHHHHHHHHhhccc--hhHHHHHhhcccCCCcccccccChhHHHHhhhc----
Q 020518 178 VEK-VLQTLQ----SLP-----SSIPSRKWLVNHMMELGFS--KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---- 241 (325)
Q Consensus 178 ~~~-~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 241 (325)
... ....+. ... ....... .........+. ....+++............ ....+...+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 282 (354)
T PLN02578 207 LTRFVVKPLKEWFQRVVLGFLFWQAKQPS-RIESVLKSVYKDKSNVDDYLVESITEPAADPN---AGEVYYRLMSRFLFN 282 (354)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHHhcCHH-HHHHHHHHhcCCcccCCHHHHHHHHhcccCCc---hHHHHHHHHHHHhcC
Confidence 000 000000 000 0000000 00000000000 0000111100000000000 00111111111
Q ss_pred ccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 242 YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
....+....+..++ +|+++|+|++|..++++..+.+.+.+++ ++++++ ++||++++|+|+++++.|.+|
T Consensus 283 ~~~~~~~~~l~~i~--~PvLiI~G~~D~~v~~~~~~~l~~~~p~--------a~l~~i-~~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 283 QSRYTLDSLLSKLS--CPLLLLWGDLDPWVGPAKAEKIKAFYPD--------TTLVNL-QAGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred CCCCCHHHHhhcCC--CCEEEEEeCCCCCCCHHHHHHHHHhCCC--------CEEEEe-CCCCCccccCHHHHHHHHHHH
Confidence 11222334455554 8999999999999999888888887765 889889 589999999999999999999
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
+++
T Consensus 352 l~~ 354 (354)
T PLN02578 352 LSS 354 (354)
T ss_pred HhC
Confidence 964
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=241.39 Aligned_cols=278 Identities=18% Similarity=0.228 Sum_probs=171.0
Q ss_pred cCCccccccceEEEEcccCCC---CCCCceEEEecCCCCCCCChH--HHHHHHHhhhhccC-CCCceEEEEeCCCCCCCC
Q 020518 20 NSPTTRSLQTLAYEEVRSSSD---RPYTSTAFVLHGLLGSGRNWR--SFSRNLASTLSQTS-ASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 20 ~~~~~~~~~~l~y~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~-~~~~~~vi~~D~~G~G~S 93 (325)
.+....+|.+++|.++|.+.. ...+|+|||+||++++...|. .+.+.|.... .. ..++|+||++|+||||.|
T Consensus 42 ~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~--~~l~~~~~~Via~Dl~GhG~S 119 (360)
T PRK06489 42 HSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPG--QPLDASKYFIILPDGIGHGKS 119 (360)
T ss_pred cCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCC--CcccccCCEEEEeCCCCCCCC
Confidence 334556788999999986310 011689999999999988886 5555541000 00 017899999999999999
Q ss_pred CCCCCC----CCCCCHHHHHHHHHHHH-HHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 94 AEIEGL----DPPHDIANAANDLANLV-KAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 94 ~~~~~~----~~~~~~~~~~~~l~~~l-~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+.+. ...++++++++++.+++ ++++++ +++ ++||||||++|+.+|.++|+ +|+++|++++.+.
T Consensus 120 ~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~--------~V~~LVLi~s~~~ 190 (360)
T PRK06489 120 SKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVK-HLRLILGTSMGGMHAWMWGEKYPD--------FMDALMPMASQPT 190 (360)
T ss_pred CCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCC-ceeEEEEECHHHHHHHHHHHhCch--------hhheeeeeccCcc
Confidence 876421 01589999999988865 889998 875 89999999999999999999 9999999988643
Q ss_pred CCCCCCchhHHHHHHHHhhcCCC----CCCcHH-HHHHHH--H---h----------hccchhHHHHHhhcccCCCcccc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPS----SIPSRK-WLVNHM--M---E----------LGFSKSLSEWIGTNLKKSGERET 227 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~--~---~----------~~~~~~~~~~~~~~~~~~~~~~~ 227 (325)
........ ........+..... ...... ...... . . .........++........
T Consensus 191 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 265 (360)
T PRK06489 191 EMSGRNWM-WRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV---- 265 (360)
T ss_pred cccHHHHH-HHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh----
Confidence 22111100 00111111111100 000000 000000 0 0 0000001111111110000
Q ss_pred cccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH--HHHHHHhhhcCCCCCCceeEEEecCC---
Q 020518 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI--QRLEGLANRQGDGSEGKVSVHVLPNA--- 302 (325)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--- 302 (325)
......+..........+....+.+++ +|+|+|+|++|..++++.. +.+.+.+++ ++++++++|
T Consensus 266 -~~~~~~~~~~~~~~~~~d~~~~L~~I~--~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--------a~l~~i~~a~~~ 334 (360)
T PRK06489 266 -TADANDFLYQWDSSRDYNPSPDLEKIK--APVLAINSADDERNPPETGVMEAALKRVKH--------GRLVLIPASPET 334 (360)
T ss_pred -hcCHHHHHHHHHHhhccChHHHHHhCC--CCEEEEecCCCcccChhhHHHHHHHHhCcC--------CeEEEECCCCCC
Confidence 001112212222222334455666665 8999999999999988754 566666665 899999996
Q ss_pred -CccccccChHHHHHHHHHHHhcC
Q 020518 303 -GHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 303 -gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
||+++ |+|++|++.|.+||+.+
T Consensus 335 ~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 335 RGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCcccc-cCHHHHHHHHHHHHHhc
Confidence 99997 89999999999999864
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=241.57 Aligned_cols=270 Identities=15% Similarity=0.156 Sum_probs=169.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++.+++|...++.. .+.+++|||+||++++...|.. +++.|.+... ++|+|+++|+||||.|+.+.. ..++
T Consensus 184 ~~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~-----~~yrVia~Dl~G~G~S~~p~~--~~yt 255 (481)
T PLN03087 184 SNESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFWTETLFPNFSDAAK-----STYRLFAVDLLGFGRSPKPAD--SLYT 255 (481)
T ss_pred CCeEEEEEEecCCC-CCCCCeEEEECCCCccHHHHHHHHHHHHHHHhh-----CCCEEEEECCCCCCCCcCCCC--CcCC
Confidence 44689999988742 2346899999999999999985 4566663221 689999999999999987754 5689
Q ss_pred HHHHHHHHH-HHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 105 IANAANDLA-NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 105 ~~~~~~~l~-~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
++++++++. .++++++.+ +++++||||||++++.+|.++|+ +|+++|+++++........ ........
T Consensus 256 l~~~a~~l~~~ll~~lg~~-k~~LVGhSmGG~iAl~~A~~~Pe--------~V~~LVLi~~~~~~~~~~~--~~~~~~~~ 324 (481)
T PLN03087 256 LREHLEMIERSVLERYKVK-SFHIVAHSLGCILALALAVKHPG--------AVKSLTLLAPPYYPVPKGV--QATQYVMR 324 (481)
T ss_pred HHHHHHHHHHHHHHHcCCC-CEEEEEECHHHHHHHHHHHhChH--------hccEEEEECCCccccccch--hHHHHHHH
Confidence 999999994 899999999 99999999999999999999999 9999999997643322111 00111111
Q ss_pred HhhcCC--CCCC--c-HHHHHHHHHhhc-----cchhHHHHHhhcccCCCccccc---------ccChhHHHHhhhccc-
Q 020518 184 TLQSLP--SSIP--S-RKWLVNHMMELG-----FSKSLSEWIGTNLKKSGERETW---------AFNLDGAVQMFNSYR- 243 (325)
Q Consensus 184 ~~~~~~--~~~~--~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~- 243 (325)
...... .... . ............ ......+++............. .........+.....
T Consensus 325 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~ 404 (481)
T PLN03087 325 KVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGS 404 (481)
T ss_pred HhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhh
Confidence 110000 0000 0 000000000000 0000011110000000000000 000000000010000
Q ss_pred --CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHH
Q 020518 244 --EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAP 320 (325)
Q Consensus 244 --~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~ 320 (325)
..........++ +|+++|+|++|..+|++..+.+++.+++ +++++++++||++++ |+|++|++.|.+
T Consensus 405 ~l~~~l~~l~~~I~--vPtLII~Ge~D~ivP~~~~~~la~~iP~--------a~l~vI~~aGH~~~v~e~p~~fa~~L~~ 474 (481)
T PLN03087 405 KLDGYLDHVRDQLK--CDVAIFHGGDDELIPVECSYAVKAKVPR--------ARVKVIDDKDHITIVVGRQKEFARELEE 474 (481)
T ss_pred hhhhHHHHHHHhCC--CCEEEEEECCCCCCCHHHHHHHHHhCCC--------CEEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 000111122344 8999999999999999998888888876 999999999999986 999999999999
Q ss_pred HHhc
Q 020518 321 RIAS 324 (325)
Q Consensus 321 fl~~ 324 (325)
|.++
T Consensus 475 F~~~ 478 (481)
T PLN03087 475 IWRR 478 (481)
T ss_pred Hhhc
Confidence 9864
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=229.85 Aligned_cols=253 Identities=18% Similarity=0.237 Sum_probs=168.1
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHH
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 109 (325)
++|..+|++ .+++|+|||+||+++++..|..+++.|. ++|+|+++|+||||.|..+.. ..+++++++
T Consensus 1 ~~~~~~~~~--~~~~~~iv~lhG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~ 67 (257)
T TIGR03611 1 MHYELHGPP--DADAPVVVLSSGLGGSGSYWAPQLDVLT---------QRFHVVTYDHRGTGRSPGELP--PGYSIAHMA 67 (257)
T ss_pred CEEEEecCC--CCCCCEEEEEcCCCcchhHHHHHHHHHH---------hccEEEEEcCCCCCCCCCCCc--ccCCHHHHH
Confidence 467777753 2357899999999999999999988887 689999999999999987654 678999999
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
+++.+++++++.+ +++++||||||.+++.++.++|+ +|+++|++++....... ...........+....
T Consensus 68 ~~~~~~i~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 136 (257)
T TIGR03611 68 DDVLQLLDALNIE-RFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSRPDPH--TRRCFDVRIALLQHAG 136 (257)
T ss_pred HHHHHHHHHhCCC-cEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCCCChh--HHHHHHHHHHHHhccC
Confidence 9999999999988 99999999999999999999999 99999999976433211 0001111111111100
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccC----CCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKK----SGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
.. ..........+. ..|+...... ........................+....+..++ +|+++++|
T Consensus 137 ~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~l~i~g 206 (257)
T TIGR03611 137 PE-----AYVHAQALFLYP---ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQ--HPVLLIAN 206 (257)
T ss_pred cc-----hhhhhhhhhhcc---ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccC--ccEEEEec
Confidence 00 000000000000 0000000000 0000000000111111112222223334455554 89999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|..++++..+.+.+..++ ++++.++++||++++++|+++++.|.+||++
T Consensus 207 ~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 207 RDDMLVPYTQSLRLAAALPN--------AQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CcCcccCHHHHHHHHHhcCC--------ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 99999999888777776655 8999999999999999999999999999974
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=232.81 Aligned_cols=249 Identities=15% Similarity=0.187 Sum_probs=159.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH---HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS---RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+.+++|...|. +++|||+||++++...|..+. ..+.+ .+|+|+++|+||||.|+.+.. ...
T Consensus 19 ~~~~~y~~~g~------~~~ivllHG~~~~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~~~~--~~~ 82 (282)
T TIGR03343 19 NFRIHYNEAGN------GEAVIMLHGGGPGAGGWSNYYRNIGPFVD--------AGYRVILKDSPGFNKSDAVVM--DEQ 82 (282)
T ss_pred ceeEEEEecCC------CCeEEEECCCCCchhhHHHHHHHHHHHHh--------CCCEEEEECCCCCCCCCCCcC--ccc
Confidence 45688887663 578999999999888887543 34443 689999999999999987532 111
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC--CCchhHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT--ENSEGEVEKV 181 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~--~~~~~~~~~~ 181 (325)
....+++++.++++.++.+ +++++||||||.+++.+|.++|+ +|+++|++++....... ..........
T Consensus 83 ~~~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T TIGR03343 83 RGLVNARAVKGLMDALDIE-KAHLVGNSMGGATALNFALEYPD--------RIGKLILMGPGGLGPSLFAPMPMEGIKLL 153 (282)
T ss_pred ccchhHHHHHHHHHHcCCC-CeeEEEECchHHHHHHHHHhChH--------hhceEEEECCCCCCccccccCchHHHHHH
Confidence 2225789999999999999 99999999999999999999999 99999999975321110 0000111111
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhcc-----chhHHHHHhhcccCCCcccccccChhHHHHhhh-----cccCCcccccc
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGF-----SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFN-----SYREMSYWPLL 251 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 251 (325)
...+ .. .........+....+ .....+........ .......... .+...+....+
T Consensus 154 ~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l 219 (282)
T TIGR03343 154 FKLY---AE--PSYETLKQMLNVFLFDQSLITEELLQGRWENIQR---------QPEHLKNFLISSQKAPLSTWDVTARL 219 (282)
T ss_pred HHHh---cC--CCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhc---------CHHHHHHHHHhccccccccchHHHHH
Confidence 1110 00 000001100000000 00000000000000 0000001100 01111223344
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||++
T Consensus 220 ~~i~--~Pvlli~G~~D~~v~~~~~~~~~~~~~~--------~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 220 GEIK--AKTLVTWGRDDRFVPLDHGLKLLWNMPD--------AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hhCC--CCEEEEEccCCCcCCchhHHHHHHhCCC--------CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 5555 8999999999999999888888877765 9999999999999999999999999999964
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=230.28 Aligned_cols=255 Identities=21% Similarity=0.282 Sum_probs=169.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|.+.|+. ++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+.. ..+++
T Consensus 14 ~~~~~~~~~~g~~----~~~~vv~~hG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~~~ 78 (278)
T TIGR03056 14 GPFHWHVQDMGPT----AGPLLLLLHGTGASTHSWRDLMPPLA---------RSFRVVAPDLPGHGFTRAPFR--FRFTL 78 (278)
T ss_pred CCEEEEEEecCCC----CCCeEEEEcCCCCCHHHHHHHHHHHh---------hCcEEEeecCCCCCCCCCccc--cCCCH
Confidence 6778999988763 46899999999999999999999988 679999999999999987654 47899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC--chhHHHHHHH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN--SEGEVEKVLQ 183 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~~~~ 183 (325)
+++++++.+++++++.+ +++|+||||||.+++.+|.++|+ +++++|++++......... ........
T Consensus 79 ~~~~~~l~~~i~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~-- 147 (278)
T TIGR03056 79 PSMAEDLSALCAAEGLS-PDGVIGHSAGAAIALRLALDGPV--------TPRMVVGINAALMPFEGMAGTLFPYMARV-- 147 (278)
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEECccHHHHHHHHHhCCc--------ccceEEEEcCcccccccccccccchhhHh--
Confidence 99999999999999988 99999999999999999999999 9999999987643221100 00000000
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCc-cc-------ccccChhHHHHhhhcccCCcccccccCCC
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGE-RE-------TWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
+.... . ......... ........+.......... .. ...............+........+..+
T Consensus 148 -~~~~~-~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i- 219 (278)
T TIGR03056 148 -LACNP-F---TPPMMSRGA--ADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRI- 219 (278)
T ss_pred -hhhcc-c---chHHHHhhc--ccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccC-
Confidence 00000 0 000000000 0000000000000000000 00 0000001111111111111122234444
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
++|+++|+|++|..++++..+.+.+.+++ ++++.++++||++++|.|+++++.|.+|++
T Consensus 220 -~~P~lii~g~~D~~vp~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 220 -TIPLHLIAGEEDKAVPPDESKRAATRVPT--------ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred -CCCEEEEEeCCCcccCHHHHHHHHHhccC--------CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 48999999999999999888888777665 899999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=233.17 Aligned_cols=261 Identities=14% Similarity=0.117 Sum_probs=167.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~ 103 (325)
.++.+++|.+.|+. ++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+... ...+
T Consensus 112 ~~~~~~~y~~~G~~----~~~~ivllHG~~~~~~~w~~~~~~L~---------~~~~Via~DlpG~G~S~~p~~~~~~~y 178 (383)
T PLN03084 112 SDLFRWFCVESGSN----NNPPVLLIHGFPSQAYSYRKVLPVLS---------KNYHAIAFDWLGFGFSDKPQPGYGFNY 178 (383)
T ss_pred CCceEEEEEecCCC----CCCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEECCCCCCCCCCCcccccccC
Confidence 57889999998863 46899999999999999999999988 7899999999999999887531 1368
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++++++++.+++++++++ +++|+|||+||.+++.+|.++|+ +|+++|+++++...... ........+..
T Consensus 179 s~~~~a~~l~~~i~~l~~~-~~~LvG~s~GG~ia~~~a~~~P~--------~v~~lILi~~~~~~~~~-~~p~~l~~~~~ 248 (383)
T PLN03084 179 TLDEYVSSLESLIDELKSD-KVSLVVQGYFSPPVVKYASAHPD--------KIKKLILLNPPLTKEHA-KLPSTLSEFSN 248 (383)
T ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEECHHHHHHHHHHHhChH--------hhcEEEEECCCCccccc-cchHHHHHHHH
Confidence 9999999999999999999 99999999999999999999999 99999999986432110 01111111100
Q ss_pred Hhhc-CCCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCC------cccccccC
Q 020518 184 TLQS-LPSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM------SYWPLLEH 253 (325)
Q Consensus 184 ~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 253 (325)
.+.. ...... .......+.... ..+............... .. .....+...+... +....+..
T Consensus 249 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~---~~---~~l~~~~r~~~~~l~~~~~~l~~~l~~ 321 (383)
T PLN03084 249 FLLGEIFSQDP-LRASDKALTSCGPYAMKEDDAMVYRRPYLTSGS---SG---FALNAISRSMKKELKKYIEEMRSILTD 321 (383)
T ss_pred HHhhhhhhcch-HHHHhhhhcccCccCCCHHHHHHHhccccCCcc---hH---HHHHHHHHHhhcccchhhHHHHhhhcc
Confidence 0000 000000 000000000000 000000011100000000 00 0000111111100 01111111
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...++|+++|+|++|..++++..+.+.+.. + ++++++++|||++++|+|+++++.|.+||+.
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~--------a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKSS-Q--------HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-C--------CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 123589999999999999987776666652 3 8999999999999999999999999999863
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=233.36 Aligned_cols=264 Identities=17% Similarity=0.143 Sum_probs=168.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+|.+|+|..+++.. .+.+++|||+||++++... |..++..|++ .||+|+++|+||||.|+.+.. ...
T Consensus 69 ~~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~--------~g~~v~~~D~~G~G~S~~~~~--~~~ 137 (349)
T PLN02385 69 SRGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIARKIAS--------SGYGVFAMDYPGFGLSEGLHG--YIP 137 (349)
T ss_pred CCCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCCC--CcC
Confidence 468899999988642 2357899999999988765 5788888986 799999999999999987643 346
Q ss_pred CHHHHHHHHHHHHHHhCCC-----CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAKGWD-----WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++++++|+.++++.+... .+++|+||||||++++.++.++|+ +|+++|++++..............
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--------~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--------AWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--------hhhheeEecccccccccccCchHH
Confidence 8999999999999877532 279999999999999999999999 999999999865432111111111
Q ss_pred HHHHHHhhcCCCCC--CcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 179 EKVLQTLQSLPSSI--PSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
......+....... .......... +............. ..............++... .+....+..++
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~--~~~~~~l~~i~- 279 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELA----FRDLKKRKMAEYNV---IAYKDKPRLRTAVELLRTT--QEIEMQLEEVS- 279 (349)
T ss_pred HHHHHHHHHHCCCceecCCCcccccc----ccCHHHHHHhhcCc---ceeCCCcchHHHHHHHHHH--HHHHHhcccCC-
Confidence 12221111111000 0000000000 00000000000000 0000000111111122111 12223344554
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH----HHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG----LLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 324 (325)
+|+|+|+|++|.++++...+.+.+.+.. +++++++++++||+++.|+|++ +++.|.+||++
T Consensus 280 -~P~Lii~G~~D~vv~~~~~~~l~~~~~~------~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 280 -LPLLILHGEADKVTDPSVSKFLYEKASS------SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred -CCEEEEEeCCCCccChHHHHHHHHHcCC------CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 8999999999999999888877776642 1279999999999999999987 88889999974
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=230.92 Aligned_cols=259 Identities=17% Similarity=0.161 Sum_probs=159.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCC------------ChHHHHH---HHHhhhhccCCCCceEEEEeCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR------------NWRSFSR---NLASTLSQTSASSEWRMVLVDLRNH 90 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~---~l~~~~~~~~~~~~~~vi~~D~~G~ 90 (325)
++.+++|...|.. ++|+||+||+.++.. .|..++. .|.. ++|+||++|+|||
T Consensus 44 ~~~~l~y~~~G~~-----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~--------~~~~Vi~~Dl~G~ 110 (343)
T PRK08775 44 EDLRLRYELIGPA-----GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP--------ARFRLLAFDFIGA 110 (343)
T ss_pred CCceEEEEEeccC-----CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCc--------cccEEEEEeCCCC
Confidence 6788999998863 446777777766665 6887775 4532 6899999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 91 GRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 91 G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
|.|.. ..++++++++|+.++++++++++.++|+||||||++|+.+|.++|+ +|+++|++++.+....
T Consensus 111 g~s~~-----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~--------~V~~LvLi~s~~~~~~ 177 (343)
T PRK08775 111 DGSLD-----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPA--------RVRTLVVVSGAHRAHP 177 (343)
T ss_pred CCCCC-----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChH--------hhheEEEECccccCCH
Confidence 98843 4578899999999999999997235799999999999999999999 9999999998653211
Q ss_pred CCCchhHHHHHHHHhhcCCCCC---CcHHHHHHHH--HhhccchhHHHHHhhcccCCCc---------------cccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSI---PSRKWLVNHM--MELGFSKSLSEWIGTNLKKSGE---------------RETWAF 230 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 230 (325)
................... .......... ............+......... ......
T Consensus 178 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 254 (343)
T PRK08775 178 ---YAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVART 254 (343)
T ss_pred ---HHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhc
Confidence 0101111111111111000 0000000000 0000000011111100000000 000000
Q ss_pred ChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHh-hhcCCCCCCceeEEEecC-CCccccc
Q 020518 231 NLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLA-NRQGDGSEGKVSVHVLPN-AGHWVHV 308 (325)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~ 308 (325)
.............. ....+.+++ +|+|+|+|++|..++++..+.+.+.+ ++ ++++++++ +||++++
T Consensus 255 ~~~~~~~~~~~~~~--~~~~l~~I~--~PtLvi~G~~D~~~p~~~~~~~~~~i~p~--------a~l~~i~~~aGH~~~l 322 (343)
T PRK08775 255 PVNAYLRLSESIDL--HRVDPEAIR--VPTVVVAVEGDRLVPLADLVELAEGLGPR--------GSLRVLRSPYGHDAFL 322 (343)
T ss_pred ChhHHHHHHHHHhh--cCCChhcCC--CCeEEEEeCCCEeeCHHHHHHHHHHcCCC--------CeEEEEeCCccHHHHh
Confidence 01111111111000 011234444 89999999999999988777776655 34 89999985 9999999
Q ss_pred cChHHHHHHHHHHHhcC
Q 020518 309 DNPKGLLEIVAPRIASV 325 (325)
Q Consensus 309 e~p~~~~~~i~~fl~~~ 325 (325)
|+|++|++.|.+||+++
T Consensus 323 E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 323 KETDRIDAILTTALRST 339 (343)
T ss_pred cCHHHHHHHHHHHHHhc
Confidence 99999999999999764
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=230.40 Aligned_cols=272 Identities=13% Similarity=0.166 Sum_probs=164.1
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH---HHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS---RNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
++.....++.+++|..+|+..+ ...|+||++||++++...|..++ +.|.. ++|+||++|+||||.|+.
T Consensus 17 ~~~g~~~~~~~l~y~~~G~~~~-~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~ 87 (339)
T PRK07581 17 LQSGATLPDARLAYKTYGTLNA-AKDNAILYPTWYSGTHQDNEWLIGPGRALDP--------EKYFIIIPNMFGNGLSSS 87 (339)
T ss_pred ecCCCCcCCceEEEEecCccCC-CCCCEEEEeCCCCCCcccchhhccCCCccCc--------CceEEEEecCCCCCCCCC
Confidence 4455556788999999986321 23466777788887777776543 34543 689999999999999986
Q ss_pred CCCCCCCCCHHH-----HHHHHHH----HHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 96 IEGLDPPHDIAN-----AANDLAN----LVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 96 ~~~~~~~~~~~~-----~~~~l~~----~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+......+++++ +++++.+ ++++++++ + ++||||||||++|+.+|.++|+ +|+++|++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~-~~~~lvG~S~GG~va~~~a~~~P~--------~V~~Lvli~~~ 158 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIE-RLALVVGWSMGAQQTYHWAVRYPD--------MVERAAPIAGT 158 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCC-ceEEEEEeCHHHHHHHHHHHHCHH--------HHhhheeeecC
Confidence 642112344332 4555554 67889999 8 5899999999999999999999 99999999976
Q ss_pred CCCCCCCCchhHHHHHHHHhhcCCC---CCC---c---HHHHHHHHHhhccchh--------------HHHHHhhcccCC
Q 020518 166 PGKVKTENSEGEVEKVLQTLQSLPS---SIP---S---RKWLVNHMMELGFSKS--------------LSEWIGTNLKKS 222 (325)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~---~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 222 (325)
+..... ...........+..... ... . ............+... ..+++.......
T Consensus 159 ~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (339)
T PRK07581 159 AKTTPH--NFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGN 236 (339)
T ss_pred CCCCHH--HHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHh
Confidence 542210 00001111111111000 000 0 0000000000000000 001110000000
Q ss_pred CcccccccChhHHHHhhhcc------c----CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCC
Q 020518 223 GERETWAFNLDGAVQMFNSY------R----EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEG 292 (325)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 292 (325)
....+......++... . ..+....+.+++ +|+|+|+|++|..++++..+.+.+.+++
T Consensus 237 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~--~PtLvI~G~~D~~~p~~~~~~l~~~ip~------- 303 (339)
T PRK07581 237 ----FLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSIT--AKTFVMPISTDLYFPPEDCEAEAALIPN------- 303 (339)
T ss_pred ----hcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCC--CCEEEEEeCCCCCCCHHHHHHHHHhCCC-------
Confidence 0000111111111100 1 113444555565 8999999999999999888887777766
Q ss_pred ceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 293 KVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 293 ~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++++++++ +||++++|+|++++..|.+||+.
T Consensus 304 -a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 304 -AELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred -CeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 89999999 99999999999999999999975
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=216.92 Aligned_cols=249 Identities=11% Similarity=0.114 Sum_probs=162.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.++.|.+-. .++|+|||+||++.+...|..++..|.+ .||+|+++|+||||.|..... ..+++
T Consensus 5 ~~~~~~~~~~~-----~~~p~vvliHG~~~~~~~w~~~~~~L~~--------~g~~vi~~dl~g~G~s~~~~~--~~~~~ 69 (273)
T PLN02211 5 NGEEVTDMKPN-----RQPPHFVLIHGISGGSWCWYKIRCLMEN--------SGYKVTCIDLKSAGIDQSDAD--SVTTF 69 (273)
T ss_pred ccccccccccc-----CCCCeEEEECCCCCCcCcHHHHHHHHHh--------CCCEEEEecccCCCCCCCCcc--cCCCH
Confidence 56677777621 3478999999999999999999999986 799999999999999865432 35899
Q ss_pred HHHHHHHHHHHHHhC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 106 ANAANDLANLVKAKG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
+++++++.+++++++ .+ +++||||||||++++.++.++|+ +|+++|++++........ ...........
T Consensus 70 ~~~~~~l~~~i~~l~~~~-~v~lvGhS~GG~v~~~~a~~~p~--------~v~~lv~~~~~~~~~g~~-~~~~~~~~~~~ 139 (273)
T PLN02211 70 DEYNKPLIDFLSSLPENE-KVILVGHSAGGLSVTQAIHRFPK--------KICLAVYVAATMLKLGFQ-TDEDMKDGVPD 139 (273)
T ss_pred HHHHHHHHHHHHhcCCCC-CEEEEEECchHHHHHHHHHhChh--------heeEEEEeccccCCCCCC-HHHHHhccccc
Confidence 999999999999985 46 99999999999999999999999 999999998754321110 00000000000
Q ss_pred hhcCCC-----------CC-C---cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 185 LQSLPS-----------SI-P---SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 185 ~~~~~~-----------~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
+..... .. . ........+...........+......... ...+...+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 204 (273)
T PLN02211 140 LSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGP---------------ILALRSARFEE 204 (273)
T ss_pred hhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcC---------------ccccccccccc
Confidence 000000 00 0 000000111111111111111100000000 00111111111
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...+. ..+|+++|.|++|..+|++..+.+.+.++. .+++.++ +||.+++++|+++++.|.++...
T Consensus 205 ~~~~~-~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~--------~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 205 ETGDI-DKVPRVYIKTLHDHVVKPEQQEAMIKRWPP--------SQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccccc-CccceEEEEeCCCCCCCHHHHHHHHHhCCc--------cEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 12222 148999999999999999988888877665 7899997 79999999999999999988754
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=219.08 Aligned_cols=233 Identities=22% Similarity=0.346 Sum_probs=147.2
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+|+|||+||+++++..|..+++.|. +|+|+++|+||||.|..+. ..+++++++++.+++++++.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~----------~~~vi~~D~~G~G~S~~~~----~~~~~~~~~~l~~~l~~~~~~- 66 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP----------DYPRLYIDLPGHGGSAAIS----VDGFADVSRLLSQTLQSYNIL- 66 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC----------CCCEEEecCCCCCCCCCcc----ccCHHHHHHHHHHHHHHcCCC-
Confidence 5789999999999999999988653 4899999999999998764 358999999999999999998
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMM 203 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (325)
+++++||||||.+|+.+|.++|+ .+|++++++++.+........................ .. .......+.
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 137 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLA-------GGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQ-EP-LEQVLADWY 137 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCc-------ccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhcc-Cc-HHHHHHHHH
Confidence 99999999999999999999976 1499999988765332111000000000000000000 00 000111100
Q ss_pred h-h---ccch-hHHHHHhhcccCCCcccccccChhHHHHhhhc---ccCCcccccccCCCCCCcEEEEeeCCCCCCChHH
Q 020518 204 E-L---GFSK-SLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV 275 (325)
Q Consensus 204 ~-~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 275 (325)
. . .... ....+...... ........++.. ....+.+..+.+++ +|+++|+|++|..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~G~~D~~~~--- 203 (242)
T PRK11126 138 QQPVFASLNAEQRQQLVAKRSN---------NNGAAVAAMLEATSLAKQPDLRPALQALT--FPFYYLCGERDSKFQ--- 203 (242)
T ss_pred hcchhhccCccHHHHHHHhccc---------CCHHHHHHHHHhcCcccCCcHHHHhhccC--CCeEEEEeCCcchHH---
Confidence 0 0 0000 00000000000 000111111111 11223344555555 899999999997542
Q ss_pred HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+.+.. + ++++++++|||++++|+|+++++.|.+|++.+
T Consensus 204 --~~~~~~-~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 204 --ALAQQL-A--------LPLHVIPNAGHNAHRENPAAFAASLAQILRLI 242 (242)
T ss_pred --HHHHHh-c--------CeEEEeCCCCCchhhhChHHHHHHHHHHHhhC
Confidence 122221 2 89999999999999999999999999999753
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=220.25 Aligned_cols=243 Identities=19% Similarity=0.263 Sum_probs=164.7
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
+++|...|+. +++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+. ..++++++
T Consensus 1 ~~~~~~~g~~---~~~~~li~~hg~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~~~---~~~~~~~~ 65 (251)
T TIGR02427 1 RLHYRLDGAA---DGAPVLVFINSLGTDLRMWDPVLPALT---------PDFRVLRYDKRGHGLSDAPE---GPYSIEDL 65 (251)
T ss_pred CceEEeecCC---CCCCeEEEEcCcccchhhHHHHHHHhh---------cccEEEEecCCCCCCCCCCC---CCCCHHHH
Confidence 3677776653 247899999999999999999998887 78999999999999997654 57899999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++++.++++.++.+ +++++||||||++++.+|.++|+ +|+++|++++.......... ......+..
T Consensus 66 ~~~~~~~i~~~~~~-~v~liG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~~~~~~~~~~~----~~~~~~~~~- 131 (251)
T TIGR02427 66 ADDVLALLDHLGIE-RAVFCGLSLGGLIAQGLAARRPD--------RVRALVLSNTAAKIGTPESW----NARIAAVRA- 131 (251)
T ss_pred HHHHHHHHHHhCCC-ceEEEEeCchHHHHHHHHHHCHH--------HhHHHhhccCccccCchhhH----HHHHhhhhh-
Confidence 99999999999988 99999999999999999999999 99999999876432211100 000000000
Q ss_pred CCCCCcHHHHHHHHHhh----ccc----hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 189 PSSIPSRKWLVNHMMEL----GFS----KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
. ............ .+. .....+.. ... ......+......+...+....+..++ +|+
T Consensus 132 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Pv 196 (251)
T TIGR02427 132 --E--GLAALADAVLERWFTPGFREAHPARLDLYRN-MLV--------RQPPDGYAGCCAAIRDADFRDRLGAIA--VPT 196 (251)
T ss_pred --c--cHHHHHHHHHHHHcccccccCChHHHHHHHH-HHH--------hcCHHHHHHHHHHHhcccHHHHhhhcC--CCe
Confidence 0 000000000000 000 00000000 000 000111111111222223333444444 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
++|+|++|..++++..+.+.+..++ .++++++++||++++++|+++++.|.+|++
T Consensus 197 lii~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 197 LCIAGDQDGSTPPELVREIADLVPG--------ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EEEEeccCCcCChHHHHHHHHhCCC--------ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999877777766654 899999999999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-32 Score=217.60 Aligned_cols=236 Identities=19% Similarity=0.243 Sum_probs=153.0
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+|+|||+||++++...|..+++.|. ++|+|+++|+||||.|... ..++++++++++.+.+ .+
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~---------~~~~vi~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~----~~- 65 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS---------AHFTLHLVDLPGHGRSRGF----GPLSLADAAEAIAAQA----PD- 65 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc---------cCeEEEEecCCcCccCCCC----CCcCHHHHHHHHHHhC----CC-
Confidence 4799999999999999999999887 6799999999999998764 3578888888876654 25
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch-hHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE-GEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++++||||||.+++.+|.++|+ +++++|++++.+......... .........+...... ........+
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 135 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPD--------RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSD--DYQRTIERF 135 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHH--------hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhh--hHHHHHHHH
Confidence 99999999999999999999999 999999999876433211111 0000111111000000 000000000
Q ss_pred H-----hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 203 M-----ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 203 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
. ...........+........ ..........+..+...+....+.+++ +|+++|+|++|..++++..+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvlii~g~~D~~~~~~~~~ 208 (245)
T TIGR01738 136 LALQTLGTPTARQDARALKQTLLARP-----TPNVQVLQAGLEILATVDLRQPLQNIS--VPFLRLYGYLDGLVPAKVVP 208 (245)
T ss_pred HHHHHhcCCccchHHHHHHHHhhccC-----CCCHHHHHHHHHHhhcccHHHHHhcCC--CCEEEEeecCCcccCHHHHH
Confidence 0 00000000000000000000 000112222222223333344455555 89999999999999998887
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.+.+.+++ +++++++++||++++|+|+++++.|.+|+
T Consensus 209 ~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 209 YLDKLAPH--------SELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHhCCC--------CeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 77777665 89999999999999999999999999996
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=224.90 Aligned_cols=263 Identities=20% Similarity=0.271 Sum_probs=167.2
Q ss_pred ceEEEEcccC-----CCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCCCCCCCC
Q 020518 29 TLAYEEVRSS-----SDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPP 102 (325)
Q Consensus 29 ~l~y~~~~~~-----~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~~~~~~~ 102 (325)
.+....++.. +.+.++++||++|||+++...|+.+++.|.+. .|++|+++|++|+| .|..+.+ ..
T Consensus 38 ~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~-------~~~~v~aiDl~G~g~~s~~~~~--~~ 108 (326)
T KOG1454|consen 38 TIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKA-------KGLRVLAIDLPGHGYSSPLPRG--PL 108 (326)
T ss_pred eeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccc-------cceEEEEEecCCCCcCCCCCCC--Cc
Confidence 5555555543 22246899999999999999999999999963 35999999999999 5555554 66
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe---cCCCCCCCCCchhHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD---SVPGKVKTENSEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~---~~~~~~~~~~~~~~~~ 179 (325)
|+..++++.+..++.+.+.. +++++|||+||.+|+.+|+.+|+ .|+++|+++ +.....+ .......
T Consensus 109 y~~~~~v~~i~~~~~~~~~~-~~~lvghS~Gg~va~~~Aa~~P~--------~V~~lv~~~~~~~~~~~~~--~~~~~~~ 177 (326)
T KOG1454|consen 109 YTLRELVELIRRFVKEVFVE-PVSLVGHSLGGIVALKAAAYYPE--------TVDSLVLLDLLGPPVYSTP--KGIKGLR 177 (326)
T ss_pred eehhHHHHHHHHHHHhhcCc-ceEEEEeCcHHHHHHHHHHhCcc--------cccceeeecccccccccCC--cchhHHH
Confidence 99999999999999999999 89999999999999999999999 999999555 3322211 1111111
Q ss_pred HHHH----HhhcCCCCCCc-H-HHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC--C
Q 020518 180 KVLQ----TLQSLPSSIPS-R-KWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE--M 245 (325)
Q Consensus 180 ~~~~----~~~~~~~~~~~-~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 245 (325)
..+. ........... . ......+.... ........... ..... ...........++..... .
T Consensus 178 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~ 253 (326)
T KOG1454|consen 178 RLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHL-LSRPV---KEHFHRDARLSLFLELLGFDE 253 (326)
T ss_pred HhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhh-eeccc---ccchhhhheeeEEEeccCccc
Confidence 1111 11111110000 0 00000000000 00000000000 00000 000011111122222221 1
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.....+.++. ++|+++|+|++|.+++.+....+.+..++ ++++++++|||.+|+|+|+++++.|..|+++
T Consensus 254 ~~~~~~~~i~-~~pvlii~G~~D~~~p~~~~~~~~~~~pn--------~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 254 NLLSLIKKIW-KCPVLIIWGDKDQIVPLELAEELKKKLPN--------AELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred hHHHhhcccc-CCceEEEEcCcCCccCHHHHHHHHhhCCC--------ceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 1122233332 48999999999999999977777776655 9999999999999999999999999999976
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=226.31 Aligned_cols=275 Identities=16% Similarity=0.165 Sum_probs=171.0
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCC-----------ChHHHHH---HHHhhhhccCCCCceEEEE
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-----------NWRSFSR---NLASTLSQTSASSEWRMVL 84 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-----------~~~~~~~---~l~~~~~~~~~~~~~~vi~ 84 (325)
+++....+|.+|+|..+|+... ..+++|||+||+++++. .|..++. .|.. ++|+|++
T Consensus 7 ~~~g~~~~~~~~~y~~~g~~~~-~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~--------~~~~vi~ 77 (351)
T TIGR01392 7 LESGGVLSDVRVAYETYGTLNA-ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT--------DRYFVVC 77 (351)
T ss_pred cCCCCccCCceEEEEeccccCC-CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC--------CceEEEE
Confidence 3455556788999999986321 23579999999999763 4676652 3433 7899999
Q ss_pred eCCCC--CCCCCCC----CCC-----CCCCCHHHHHHHHHHHHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCCc
Q 020518 85 VDLRN--HGRSAEI----EGL-----DPPHDIANAANDLANLVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 85 ~D~~G--~G~S~~~----~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
+|+|| ||.|... .+. ...++++++++++.+++++++++ + ++++||||||++++.+|.++|+
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~------ 150 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPE------ 150 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChH------
Confidence 99999 5555431 110 12589999999999999999999 8 9999999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC---CC-CC-----Cc-HHHHHHHHHh--hccchhHHHHHhhccc
Q 020518 153 VALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL---PS-SI-----PS-RKWLVNHMME--LGFSKSLSEWIGTNLK 220 (325)
Q Consensus 153 ~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-----~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 220 (325)
+|+++|++++.+...... ..........+... .. .. +. .......+.. ......+..++.....
T Consensus 151 --~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 226 (351)
T TIGR01392 151 --RVRAIVVLATSARHSAWC--IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQ 226 (351)
T ss_pred --hhheEEEEccCCcCCHHH--HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcc
Confidence 999999999875432110 00001111111110 00 00 00 0000011100 0111112222211110
Q ss_pred CCC-c-------------------ccccccChhHHHHhhhcccC-------CcccccccCCCCCCcEEEEeeCCCCCCCh
Q 020518 221 KSG-E-------------------RETWAFNLDGAVQMFNSYRE-------MSYWPLLEHPPQGMEIAIVRAEKSDRWDP 273 (325)
Q Consensus 221 ~~~-~-------------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 273 (325)
... . ......+...+......+.. .+.+..+.+++ +|+|+|+|++|..+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~--~P~Lvi~G~~D~~~p~ 304 (351)
T TIGR01392 227 SGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIK--APFLVVSITSDWLFPP 304 (351)
T ss_pred cccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCC--CCEEEEEeCCccccCH
Confidence 000 0 00011111111111111111 12345566665 8999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEE-----EecCCCccccccChHHHHHHHHHHHh
Q 020518 274 DVIQRLEGLANRQGDGSEGKVSVH-----VLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+..+.+.+.+++ ++++ ++++|||++++|+|++|++.|.+||+
T Consensus 305 ~~~~~~a~~i~~--------~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 305 AESRELAKALPA--------AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHHhh--------cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 999999988887 5544 45789999999999999999999985
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=226.24 Aligned_cols=279 Identities=16% Similarity=0.168 Sum_probs=170.9
Q ss_pred CCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-------------hHHHHH---HHHhhhhccCCCCceEEEE
Q 020518 21 SPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-------------WRSFSR---NLASTLSQTSASSEWRMVL 84 (325)
Q Consensus 21 ~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-------------~~~~~~---~l~~~~~~~~~~~~~~vi~ 84 (325)
.....++.+++|..+|... ...+|+|||+||++++... |..++. .|.. ++|+||+
T Consensus 26 ~g~~~~~~~~~y~~~G~~~-~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~--------~~~~vi~ 96 (379)
T PRK00175 26 SGAVLPPVELAYETYGTLN-ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT--------DRYFVIC 96 (379)
T ss_pred CCCCcCCceEEEEeccccC-CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc--------cceEEEe
Confidence 3444567789999998631 1236899999999999874 555542 2322 7899999
Q ss_pred eCCCCC-CCCCCCCCC-----------CCCCCHHHHHHHHHHHHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCC
Q 020518 85 VDLRNH-GRSAEIEGL-----------DPPHDIANAANDLANLVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQ 151 (325)
Q Consensus 85 ~D~~G~-G~S~~~~~~-----------~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~ 151 (325)
+|++|+ |.|+.+... ...++++++++++.+++++++++ + ++++||||||++++.+|.++|+
T Consensus 97 ~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~----- 170 (379)
T PRK00175 97 SNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPD----- 170 (379)
T ss_pred ccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChH-----
Confidence 999993 545432210 02689999999999999999999 8 5999999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC----------CCCcHH-HHHHHHH--hhccchhHHHHHhhc
Q 020518 152 FVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS----------SIPSRK-WLVNHMM--ELGFSKSLSEWIGTN 218 (325)
Q Consensus 152 ~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~ 218 (325)
+|+++|++++.+....... .........+..... ..+... ....... ..........++...
T Consensus 171 ---~v~~lvl~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~ 245 (379)
T PRK00175 171 ---RVRSALVIASSARLSAQNI--AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRE 245 (379)
T ss_pred ---hhhEEEEECCCcccCHHHH--HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcc
Confidence 9999999998754321100 000001111111000 000000 0000000 000000111111110
Q ss_pred ccCCC-------------------cccccccChhHHHHhhhcccC--------CcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 219 LKKSG-------------------ERETWAFNLDGAVQMFNSYRE--------MSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 219 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
..... ......++...+......+.. .+++..+.+++ +|+|+|+|++|.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~--~PtLvI~G~~D~~~ 323 (379)
T PRK00175 246 LQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIK--ARFLVVSFTSDWLF 323 (379)
T ss_pred ccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCC--CCEEEEEECCcccc
Confidence 00000 000011111111111111111 12455666666 89999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEec-CCCccccccChHHHHHHHHHHHhcC
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLP-NAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+++..+.+.+.+++.+. ++++++++ ++||++++|+|++|++.|.+||+.+
T Consensus 324 p~~~~~~la~~i~~a~~----~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 324 PPARSREIVDALLAAGA----DVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred CHHHHHHHHHHHHhcCC----CeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 99999999998887221 14788785 8999999999999999999999753
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=213.59 Aligned_cols=252 Identities=17% Similarity=0.193 Sum_probs=162.8
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-LDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
.+++++|||||+|++...|..-++.|+ +.++|+++|++|+|+|+.|.- .+.......+++-++++....+
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La---------~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~ 158 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLA---------KIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG 158 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhh---------hcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999 678999999999999998863 1234456689999999999999
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch---hHHHHHHHHhhcCC--------
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE---GEVEKVLQTLQSLP-------- 189 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------- 189 (325)
++ +.+|+|||+||.+|..||.+||+ +|++|||++|........... .....+...+....
T Consensus 159 L~-KmilvGHSfGGYLaa~YAlKyPe--------rV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~ 229 (365)
T KOG4409|consen 159 LE-KMILVGHSFGGYLAAKYALKYPE--------RVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLAL 229 (365)
T ss_pred Cc-ceeEeeccchHHHHHHHHHhChH--------hhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHH
Confidence 99 99999999999999999999999 999999999986544321000 00011111111100
Q ss_pred --CCCCcHHHHHHHHHhhc--------cchhHHHHHhhcccCCCcccccccChhHHHHhhhc--ccCCcccccccCCCCC
Q 020518 190 --SSIPSRKWLVNHMMELG--------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS--YREMSYWPLLEHPPQG 257 (325)
Q Consensus 190 --~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 257 (325)
...+-...+...+.... ..+.+.+++.......... ...+..++.. +......+.+..++..
T Consensus 230 LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psg------E~~fk~l~~~~g~Ar~Pm~~r~~~l~~~ 303 (365)
T KOG4409|consen 230 LRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSG------ETAFKNLFEPGGWARRPMIQRLRELKKD 303 (365)
T ss_pred HHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcH------HHHHHHHHhccchhhhhHHHHHHhhccC
Confidence 00011111111111100 1111122222221111110 1111122221 2222344455556667
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
||+++|+|++|-+ .......+....... .++.++++++||.+.+++|+.|++.|.++++.
T Consensus 304 ~pv~fiyG~~dWm-D~~~g~~~~~~~~~~------~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 304 VPVTFIYGDRDWM-DKNAGLEVTKSLMKE------YVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred CCEEEEecCcccc-cchhHHHHHHHhhcc------cceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 9999999998754 333344444432221 28999999999999999999999999999875
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-31 Score=222.09 Aligned_cols=266 Identities=15% Similarity=0.156 Sum_probs=163.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC-ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+|.+|+|+.+++....+.+++|||+||++.+.. .|..+...|.+ .||+|+++|+||||.|..... ...
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~--------~Gy~V~~~D~rGhG~S~~~~~--~~~ 109 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQ--------MGFACFALDLEGHGRSEGLRA--YVP 109 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHh--------CCCEEEEecCCCCCCCCCccc--cCC
Confidence 4789999998876432234678999999986643 45667777876 799999999999999986543 356
Q ss_pred CHHHHHHHHHHHHHHhCCC-----CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAKGWD-----WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++.+++|+.++++.+... .+++|+||||||++++.++.++|+ +|+++|++++..............
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~ 181 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--------GFDGAVLVAPMCKISDKIRPPWPI 181 (330)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--------cceeEEEecccccCCcccCCchHH
Confidence 8999999999999987531 279999999999999999999999 999999999864332111100011
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHh-hcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIG-TNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
......+........... . ...............+. ........ ..........+.... .....+..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~l~~i~-- 251 (330)
T PLN02298 182 PQILTFVARFLPTLAIVP-T-ADLLEKSVKVPAKKIIAKRNPMRYNG----KPRLGTVVELLRVTD--YLGKKLKDVS-- 251 (330)
T ss_pred HHHHHHHHHHCCCCcccc-C-CCcccccccCHHHHHHHHhCccccCC----CccHHHHHHHHHHHH--HHHHhhhhcC--
Confidence 111111111000000000 0 00000000000000000 00000000 000111111111100 1123344554
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH----HHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG----LLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 324 (325)
+|+|+|+|++|.+++++..+.+.+.++. +++++++++++||++++++|+. +.+.|.+||.+
T Consensus 252 ~PvLii~G~~D~ivp~~~~~~l~~~i~~------~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 252 IPFIVLHGSADVVTDPDVSRALYEEAKS------EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHhcc------CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999888887766643 1289999999999999998864 66677888764
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=215.35 Aligned_cols=259 Identities=14% Similarity=0.191 Sum_probs=157.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCCh-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.++.++.|...+.. ..+++|||+||++++...| ..+...+.+ .||+|+++|+||||.|..+......+
T Consensus 9 ~~~~~~~~~~~~~~---~~~~~vl~~hG~~g~~~~~~~~~~~~l~~--------~g~~vi~~d~~G~G~s~~~~~~~~~~ 77 (288)
T TIGR01250 9 VDGGYHLFTKTGGE---GEKIKLLLLHGGPGMSHEYLENLRELLKE--------EGREVIMYDQLGCGYSDQPDDSDELW 77 (288)
T ss_pred CCCCeEEEEeccCC---CCCCeEEEEcCCCCccHHHHHHHHHHHHh--------cCCEEEEEcCCCCCCCCCCCcccccc
Confidence 34667788877653 2368999999987766555 444444443 48999999999999998764311248
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++....... .........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~-~~~liG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~---~~~~~~~~~ 145 (288)
T TIGR01250 78 TIDYFVDELEEVREKLGLD-KFYLLGHSWGGMLAQEYALKYGQ--------HLKGLIISSMLDSAPEY---VKELNRLRK 145 (288)
T ss_pred cHHHHHHHHHHHHHHcCCC-cEEEEEeehHHHHHHHHHHhCcc--------ccceeeEecccccchHH---HHHHHHHHh
Confidence 9999999999999999988 89999999999999999999999 99999999875422110 000000000
Q ss_pred HhhcCCCCCCcHHHHHHHHHh-hc-c----chhHHHHHhhcccCCCc--ccc----cccChhHHHH--------hhhccc
Q 020518 184 TLQSLPSSIPSRKWLVNHMME-LG-F----SKSLSEWIGTNLKKSGE--RET----WAFNLDGAVQ--------MFNSYR 243 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~--------~~~~~~ 243 (325)
. .... .......... .. . ......+.......... ... .......... ....+.
T Consensus 146 ~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (288)
T TIGR01250 146 E---LPPE---VRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLK 219 (288)
T ss_pred h---cChh---HHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccccccccc
Confidence 0 0000 0000000000 00 0 00000000000000000 000 0000000000 000011
Q ss_pred CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 244 EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+....+..++ +|+++++|++|. ++++..+.+.+..++ +++++++++||++++|+|+++++.|.+||+
T Consensus 220 ~~~~~~~l~~i~--~P~lii~G~~D~-~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 220 DWDITDKLSEIK--VPTLLTVGEFDT-MTPEAAREMQELIAG--------SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ccCHHHHhhccC--CCEEEEecCCCc-cCHHHHHHHHHhccC--------CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 112223344444 899999999997 466666666666654 899999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=215.23 Aligned_cols=257 Identities=15% Similarity=0.154 Sum_probs=162.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|.|+.+.+. ...++.|+++||+++++..|..+++.|.+ .||+|+++|+||||.|..... ...++
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~~l~~--------~g~~via~D~~G~G~S~~~~~--~~~~~ 76 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAENISS--------LGILVFSHDHIGHGRSNGEKM--MIDDF 76 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHHHHHh--------CCCEEEEccCCCCCCCCCccC--CcCCH
Confidence 7889999988663 23456777779999999999999999987 799999999999999976432 34577
Q ss_pred HHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 106 ANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 106 ~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
.++++|+...++.+ ... +++|+||||||.+|+.+|.++|+ +++++|++++....... .....+...
T Consensus 77 ~~~~~d~~~~l~~~~~~~~~~-~~~lvG~S~GG~ia~~~a~~~p~--------~i~~lil~~p~~~~~~~-~~~~~~~~~ 146 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTYPGV-PVFLLGHSMGATISILAAYKNPN--------LFTAMILMSPLVNAEAV-PRLNLLAAK 146 (276)
T ss_pred HHHHHHHHHHHHHHHhhCCCC-CEEEEEcCchHHHHHHHHHhCcc--------ccceEEEeccccccccc-cHHHHHHHH
Confidence 77788888777654 334 89999999999999999999999 99999999986432110 001111111
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
..... ........ .......... .....+....... .. .........+... ..+....+..++ +|++
T Consensus 147 ~~~~~-~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~--~~~~~~~l~~i~--~Pvl 213 (276)
T PHA02857 147 LMGIF-YPNKIVGK--LCPESVSRDM-DEVYKYQYDPLVN-HE----KIKAGFASQVLKA--TNKVRKIIPKIK--TPIL 213 (276)
T ss_pred HHHHh-CCCCccCC--CCHhhccCCH-HHHHHHhcCCCcc-CC----CccHHHHHHHHHH--HHHHHHhcccCC--CCEE
Confidence 11110 00000000 0000000000 0000111000000 00 0011111111110 011223445554 8999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh---HHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP---KGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 324 (325)
+|+|++|.+++++..+.+.+.+.. ++++++++++||+++.|++ +++.+.|.+||+.
T Consensus 214 iv~G~~D~i~~~~~~~~l~~~~~~-------~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 214 ILQGTNNEISDVSGAYYFMQHANC-------NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred EEecCCCCcCChHHHHHHHHHccC-------CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 999999999999888877776532 2899999999999999976 5788999999964
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=219.31 Aligned_cols=273 Identities=12% Similarity=0.102 Sum_probs=167.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC---CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL---DP 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~---~~ 101 (325)
.+|.+++|..+++. ..+++||++||++++...|..++..|.+ .||+|+++|+||||.|..+... ..
T Consensus 38 ~~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~~~~l~~--------~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 38 VDDIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAELAYDLFH--------LGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred CCCCEEEEEEccCC---CCCcEEEEECCccchHHHHHHHHHHHHH--------CCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 36788999998863 2467999999999988899999988877 8999999999999999764321 02
Q ss_pred CCCHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 102 PHDIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
.++++++++|+..+++++ +.. +++++||||||.+++.++.++|+ +++++|++++......... ...
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~-~~~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl~~p~~~~~~~~~-~~~ 176 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYR-KRYALAHSMGGAILTLFLQRHPG--------VFDAIALCAPMFGIVLPLP-SWM 176 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCC-CeEEEEEcHHHHHHHHHHHhCCC--------CcceEEEECchhccCCCCC-cHH
Confidence 358999999999999886 556 99999999999999999999999 9999999988643321111 111
Q ss_pred HHHHHHHhhcCC---CCC--CcHHHHHHHHHhhc--c-chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 178 VEKVLQTLQSLP---SSI--PSRKWLVNHMMELG--F-SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 178 ~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
.......+.... ... ....+......... . ......+.. .....................+... .....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 253 (330)
T PRK10749 177 ARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLR-FYADDPELRVGGPTYHWVRESILAG--EQVLA 253 (330)
T ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHH-HHHhCCCcccCCCcHHHHHHHHHHH--HHHHh
Confidence 111111111000 000 00000000000000 0 000001110 0000000000000011111111000 01112
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh---HHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP---KGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 324 (325)
.+.+++ +|+|+|+|++|.+++++..+.+.+.+++.+.. .++++++++|+|||.++.|.+ +.+.+.|.+||++
T Consensus 254 ~~~~i~--~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~-~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 254 GAGDIT--TPLLLLQAEEERVVDNRMHDRFCEARTAAGHP-CEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred hccCCC--CCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCC-CCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 334444 89999999999999998888887776543210 012689999999999999876 6788899999975
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=213.91 Aligned_cols=226 Identities=24% Similarity=0.371 Sum_probs=151.7
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|..+.. ...++++++++++.+++++++.+ +++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~~~~-~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA---------RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDALGIK-KVI 69 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH---------TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHHTTTS-SEE
T ss_pred eEEECCCCCCHHHHHHHHHHHh---------CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcccccccc-ccc
Confidence 7999999999999999999996 899999999999999988653 13689999999999999999998 999
Q ss_pred EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH-HHHhh
Q 020518 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN-HMMEL 205 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 205 (325)
++|||+||.+++.++.++|+ +|+++|++++......... .......+..+...... ....... .+...
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 138 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPD--------RVKGLVLLSPPPPLPDSPS-RSFGPSFIRRLLAWRSR--SLRRLASRFFYRW 138 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGG--------GEEEEEEESESSSHHHHHC-HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc--------ccccceeeccccccccccc-ccccchhhhhhhhcccc--ccccccccccccc
Confidence 99999999999999999999 9999999998753221000 00001111111100000 0000000 00000
Q ss_pred ccchhHHHHHhhcccCCCcccccccChhHHHHhhhc-ccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhh
Q 020518 206 GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN 284 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 284 (325)
.......+.+.. ........+.. ....+....+..++ +|+++|+|++|..++.+..+.+.+..+
T Consensus 139 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~pvl~i~g~~D~~~~~~~~~~~~~~~~ 203 (228)
T PF12697_consen 139 FDGDEPEDLIRS-------------SRRALAEYLRSNLWQADLSEALPRIK--VPVLVIHGEDDPIVPPESAEELADKLP 203 (228)
T ss_dssp HTHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHGSS--SEEEEEEETTSSSSHHHHHHHHHHHST
T ss_pred cccccccccccc-------------cccccccccccccccccccccccccC--CCeEEeecCCCCCCCHHHHHHHHHHCC
Confidence 001111111111 01111111111 11122334445554 899999999999999877777777666
Q ss_pred hcCCCCCCceeEEEecCCCccccccChHHHHHH
Q 020518 285 RQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEI 317 (325)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 317 (325)
+ +++++++++||++++|+|++|++.
T Consensus 204 ~--------~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 204 N--------AELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp T--------EEEEEETTSSSTHHHHSHHHHHHH
T ss_pred C--------CEEEEECCCCCccHHHCHHHHhcC
Confidence 5 999999999999999999999874
|
... |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=214.52 Aligned_cols=246 Identities=17% Similarity=0.170 Sum_probs=148.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD----IANAANDLANLVK 117 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~----~~~~~~~l~~~l~ 117 (325)
.++|+|||+||++++...|...+..|. ++|+|+++|+||||.|..+.. ...+ .+.+++++.++++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~D~rG~G~S~~~~~--~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALA---------SRFRVIAIDQLGWGGSSRPDF--TCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHH---------hCCEEEEECCCCCCCCCCCCc--ccccHHHHHHHHHHHHHHHHH
Confidence 357999999999999999998888888 579999999999999987542 1112 2245778888999
Q ss_pred HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH----HHHHhhc-CCCCC
Q 020518 118 AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK----VLQTLQS-LPSSI 192 (325)
Q Consensus 118 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~ 192 (325)
.++++ +++++||||||.+++.+|.++|+ +|+++|++++................ +...+.. .....
T Consensus 172 ~l~~~-~~~lvGhS~GG~la~~~a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 172 AKNLS-NFILLGHSFGGYVAAKYALKHPE--------HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HcCCC-CeEEEEECHHHHHHHHHHHhCch--------hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 99999 99999999999999999999999 99999999876433222111100000 0000000 00000
Q ss_pred CcHHH-----------HHHHHHhhccc-------------hhHHHHHhhcccCCCcccccccChhHHHHhhhc---ccCC
Q 020518 193 PSRKW-----------LVNHMMELGFS-------------KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREM 245 (325)
Q Consensus 193 ~~~~~-----------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 245 (325)
..... .........+. ....+++........ ........... ....
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 315 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKA-------SGELCLKYIFSFGAFARK 315 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCC-------chHHHHHHhccCchhhcc
Confidence 00000 00000000000 000000000000000 00000111111 1122
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+....+..++ +|+++|+|++|.+.+ .....+.+.... .+++++++++||++++|+|++|++.|.+|++.
T Consensus 316 ~~~~~l~~I~--vP~liI~G~~D~i~~-~~~~~~~~~~~~-------~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 316 PLLESASEWK--VPTTFIYGRHDWMNY-EGAVEARKRMKV-------PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred hHhhhcccCC--CCEEEEEeCCCCCCc-HHHHHHHHHcCC-------CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 3333455554 899999999997654 444444333321 27899999999999999999999999998864
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-30 Score=206.28 Aligned_cols=237 Identities=23% Similarity=0.443 Sum_probs=150.9
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAND-LANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~-l~~~l~~~~~~ 122 (325)
+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+... ..+++++++++ +..+++.++.+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~---------~~~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 70 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG---------PHFRCLAIDLPGHGSSQSPDEI-ERYDFEEAAQDILATLLDQLGIE 70 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc---------ccCeEEEEcCCCCCCCCCCCcc-ChhhHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999998 7899999999999999875421 46789999999 78888888888
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH---HHHHHhhcCCCCCCcHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE---KVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 199 (325)
+++++||||||.+++.+|.++|+ +|++++++++.+............. .+...+... ......
T Consensus 71 -~~~l~G~S~Gg~ia~~~a~~~~~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 136 (251)
T TIGR03695 71 -PFFLVGYSMGGRIALYYALQYPE--------RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQE-----GLEAFL 136 (251)
T ss_pred -eEEEEEeccHHHHHHHHHHhCch--------heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhc-----CccHHH
Confidence 99999999999999999999999 9999999997654321110000000 000000000 000000
Q ss_pred HHHHhh-c------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcc---cCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 200 NHMMEL-G------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY---REMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 200 ~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
..+... . ........+...... .........+... ...+....+..++ +|+++|+|++|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~g~~D~ 206 (251)
T TIGR03695 137 DDWYQQPLFASQKNLPPEQRQALRAKRLA--------NNPEGLAKMLRATGLGKQPSLWPKLQALT--IPVLYLCGEKDE 206 (251)
T ss_pred HHHhcCceeeecccCChHHhHHHHHhccc--------ccchHHHHHHHHhhhhcccchHHHhhCCC--CceEEEeeCcch
Confidence 000000 0 000000000000000 0001111111111 1122223344444 899999999997
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.++ +..+.+.+..++ +++++++++||++++|+|+++++.|.+||+
T Consensus 207 ~~~-~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 207 KFV-QIAKEMQKLLPN--------LTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHH-HHHHHHHhcCCC--------CcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 653 444444444443 899999999999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-29 Score=212.31 Aligned_cols=249 Identities=19% Similarity=0.275 Sum_probs=160.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..++|...++ +++++|||+||++++...|..+...|. ++|+|+++|+||||.|.... ...++
T Consensus 117 ~~~~i~~~~~g~----~~~~~vl~~HG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~g~G~s~~~~---~~~~~ 180 (371)
T PRK14875 117 GGRTVRYLRLGE----GDGTPVVLIHGFGGDLNNWLFNHAALA---------AGRPVIALDLPGHGASSKAV---GAGSL 180 (371)
T ss_pred cCcEEEEecccC----CCCCeEEEECCCCCccchHHHHHHHHh---------cCCEEEEEcCCCCCCCCCCC---CCCCH
Confidence 456788887765 247899999999999999999999888 56999999999999996554 46799
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++..+++.++.+ +++++||||||.+++.+|.++|+ ++.++|++++........ . .+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~~~--------~v~~lv~~~~~~~~~~~~--~----~~~~~~ 245 (371)
T PRK14875 181 DELAAAVLAFLDALGIE-RAHLVGHSMGGAVALRLAARAPQ--------RVASLTLIAPAGLGPEIN--G----DYIDGF 245 (371)
T ss_pred HHHHHHHHHHHHhcCCc-cEEEEeechHHHHHHHHHHhCch--------heeEEEEECcCCcCcccc--h----hHHHHh
Confidence 99999999999999988 99999999999999999999999 999999998753221110 0 011111
Q ss_pred hcCCCCCCcHHHHHHHHHhh--ccchhH-HHHHhhcccCCCcccccccChhHHH-Hhhhc-ccCCcccccccCCCCCCcE
Q 020518 186 QSLPSSIPSRKWLVNHMMEL--GFSKSL-SEWIGTNLKKSGERETWAFNLDGAV-QMFNS-YREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~P~ 260 (325)
....... ............ ...... ....... .... ......... ..+.. ....+....+..++ +|+
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pv 317 (371)
T PRK14875 246 VAAESRR-ELKPVLELLFADPALVTRQMVEDLLKYK-RLDG----VDDALRALADALFAGGRQRVDLRDRLASLA--IPV 317 (371)
T ss_pred hcccchh-HHHHHHHHHhcChhhCCHHHHHHHHHHh-cccc----HHHHHHHHHHHhccCcccchhHHHHHhcCC--CCE
Confidence 0000000 000000000000 000000 0000000 0000 000000000 00000 01112222344444 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|++|..+++...+. +... +++.+++++||++++++|+++++.|.+||++
T Consensus 318 lii~g~~D~~vp~~~~~~---l~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 318 LVIWGEQDRIIPAAHAQG---LPDG--------VAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EEEEECCCCccCHHHHhh---ccCC--------CeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999998765433 2222 8999999999999999999999999999975
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=199.98 Aligned_cols=119 Identities=25% Similarity=0.313 Sum_probs=98.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|.+.|.+ ++++|||+||++++...+ .+...+.. .+|+|+++|+||||.|..+... ..++
T Consensus 12 ~~~~~l~y~~~g~~----~~~~lvllHG~~~~~~~~-~~~~~~~~--------~~~~vi~~D~~G~G~S~~~~~~-~~~~ 77 (306)
T TIGR01249 12 SDNHQLYYEQSGNP----DGKPVVFLHGGPGSGTDP-GCRRFFDP--------ETYRIVLFDQRGCGKSTPHACL-EENT 77 (306)
T ss_pred CCCcEEEEEECcCC----CCCEEEEECCCCCCCCCH-HHHhccCc--------cCCEEEEECCCCCCCCCCCCCc-ccCC
Confidence 35889999998752 367899999998876543 33344433 6899999999999999865421 3568
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+++++++..++++++++ +++++||||||.+++.++.++|+ +|+++|++++..
T Consensus 78 ~~~~~~dl~~l~~~l~~~-~~~lvG~S~GG~ia~~~a~~~p~--------~v~~lvl~~~~~ 130 (306)
T TIGR01249 78 TWDLVADIEKLREKLGIK-NWLVFGGSWGSTLALAYAQTHPE--------VVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHHHcCCC-CEEEEEECHHHHHHHHHHHHChH--------hhhhheeecccc
Confidence 899999999999999998 99999999999999999999999 999999998764
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=236.99 Aligned_cols=261 Identities=18% Similarity=0.306 Sum_probs=164.3
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-----CCCCCC
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-----LDPPHD 104 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~ 104 (325)
++|.+.|.. +++++|||+||++++...|..++..|. ++|+|+++|+||||.|..+.. ....++
T Consensus 1360 i~~~~~G~~---~~~~~vVllHG~~~s~~~w~~~~~~L~---------~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1360 IKVHEVGQN---AEGSVVLFLHGFLGTGEDWIPIMKAIS---------GSARCISIDLPGHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred EEEEecCCC---CCCCeEEEECCCCCCHHHHHHHHHHHh---------CCCEEEEEcCCCCCCCCCccccccccccccCC
Confidence 444555532 346899999999999999999999887 679999999999999976431 013578
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH-H
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL-Q 183 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~-~ 183 (325)
++++++++.+++++++.+ +++|+||||||.+++.++.++|+ +|+++|++++.+...... ........ .
T Consensus 1428 i~~~a~~l~~ll~~l~~~-~v~LvGhSmGG~iAl~~A~~~P~--------~V~~lVlis~~p~~~~~~--~~~~~~~~~~ 1496 (1655)
T PLN02980 1428 VELVADLLYKLIEHITPG-KVTLVGYSMGARIALYMALRFSD--------KIEGAVIISGSPGLKDEV--ARKIRSAKDD 1496 (1655)
T ss_pred HHHHHHHHHHHHHHhCCC-CEEEEEECHHHHHHHHHHHhChH--------hhCEEEEECCCCccCchH--HHHHHhhhhh
Confidence 999999999999999998 99999999999999999999999 999999998765432110 00000000 0
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhc---ccCCcccccccCC
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREMSYWPLLEHP 254 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 254 (325)
........ .....+...+.... .......++..... ..+.......+.. ....+.+..+..+
T Consensus 1497 ~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~dl~~~L~~I 1567 (1655)
T PLN02980 1497 SRARMLID-HGLEIFLENWYSGELWKSLRNHPHFNKIVASRLL--------HKDVPSLAKLLSDLSIGRQPSLWEDLKQC 1567 (1655)
T ss_pred HHHHHHHh-hhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHh--------cCCHHHHHHHHHHhhhcccchHHHHHhhC
Confidence 00000000 00000000000000 00001111110000 0011111112211 1233445556666
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCC----CCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 255 PQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGD----GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+ +|+|+|+|++|..++ +..+.+.+.+++... ...+.++++++++|||++++|+|+++++.|.+||+++
T Consensus 1568 ~--~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1568 D--TPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred C--CCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 6 899999999998774 555566665554200 0001268999999999999999999999999999753
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=180.90 Aligned_cols=264 Identities=16% Similarity=0.111 Sum_probs=179.8
Q ss_pred ccccccccccccccCCccccccceEEEEcccCCCCCCCceEEEecCCCC-CCCChHHHHHHHHhhhhccCCCCceEEEEe
Q 020518 7 NRHNSLNLLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLG-SGRNWRSFSRNLASTLSQTSASSEWRMVLV 85 (325)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~ 85 (325)
..|.+....+.+.++..--+|.+|+|.++|.+ ...|++++|..+ ....|.+.+..|...+ .+.|+++
T Consensus 10 ~s~~~~~~~~~~te~kv~vng~ql~y~~~G~G-----~~~iLlipGalGs~~tDf~pql~~l~k~l-------~~Tivaw 77 (277)
T KOG2984|consen 10 SSHLSPMTQSDYTESKVHVNGTQLGYCKYGHG-----PNYILLIPGALGSYKTDFPPQLLSLFKPL-------QVTIVAW 77 (277)
T ss_pred hccCCccccchhhhheeeecCceeeeeecCCC-----CceeEecccccccccccCCHHHHhcCCCC-------ceEEEEE
Confidence 34555444455555555568999999999986 457899999855 4578888887777643 3899999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 86 DLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 86 D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
|.||+|.|.+|.......-+...+++..++++.+..+ ++.++|||=||..|+..|+++++ .|.++|+.++.
T Consensus 78 DPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~-~fsvlGWSdGgiTalivAak~~e--------~v~rmiiwga~ 148 (277)
T KOG2984|consen 78 DPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLE-PFSVLGWSDGGITALIVAAKGKE--------KVNRMIIWGAA 148 (277)
T ss_pred CCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCC-CeeEeeecCCCeEEEEeeccChh--------hhhhheeeccc
Confidence 9999999998864223345667788889999999999 99999999999999999999999 99999999876
Q ss_pred CCCCCCC-CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC
Q 020518 166 PGKVKTE-NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE 244 (325)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (325)
....... .....++..-.+...... .....+....+......|+.. ..........
T Consensus 149 ayvn~~~~ma~kgiRdv~kWs~r~R~------P~e~~Yg~e~f~~~wa~wvD~-----------------v~qf~~~~dG 205 (277)
T KOG2984|consen 149 AYVNHLGAMAFKGIRDVNKWSARGRQ------PYEDHYGPETFRTQWAAWVDV-----------------VDQFHSFCDG 205 (277)
T ss_pred ceecchhHHHHhchHHHhhhhhhhcc------hHHHhcCHHHHHHHHHHHHHH-----------------HHHHhhcCCC
Confidence 5432211 111111111111111000 001111111122222223221 1111111111
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.-....+++++ ||+++++|++|++++...+..+....+. +++.++|+++|.+++..+++|+..+.+||++
T Consensus 206 ~fCr~~lp~vk--cPtli~hG~kDp~~~~~hv~fi~~~~~~--------a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 206 RFCRLVLPQVK--CPTLIMHGGKDPFCGDPHVCFIPVLKSL--------AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred chHhhhccccc--CCeeEeeCCcCCCCCCCCccchhhhccc--------ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 11233455555 9999999999999998877777777776 9999999999999999999999999999986
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=202.80 Aligned_cols=264 Identities=12% Similarity=0.104 Sum_probs=161.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..+.|..+.+.. .+.+++|||+||++++...|..+++.|.+ .||+|+++|+||||.|..... ...++
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~--------~Gy~V~~~D~rGhG~S~~~~~--~~~~~ 187 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFAKQLTS--------CGFGVYAMDWIGHGGSDGLHG--YVPSL 187 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHHHHHHH--------CCCEEEEeCCCCCCCCCCCCC--CCcCH
Confidence 45567777776632 23467899999999998889999999987 899999999999999987643 45688
Q ss_pred HHHHHHHHHHHHHhCC---CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLANLVKAKGW---DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
+.+++|+.++++.+.. ..+++++||||||.+++.++. +|+ ...+++++|+.+|..................
T Consensus 188 ~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~-----~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~ 261 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPS-----IEDKLEGIVLTSPALRVKPAHPIVGAVAPIF 261 (395)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccC-----cccccceEEEECcccccccchHHHHHHHHHH
Confidence 9999999999988742 127999999999999998764 553 0127999999987643221110000111111
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
..+.... ....... ...................... ..+ ........+.... ......+.+++ +|+|+
T Consensus 262 ~~~~p~~-~~~~~~~--~~~~~s~~~~~~~~~~~dp~~~----~g~-i~~~~~~~~~~~~--~~l~~~L~~I~--vPvLI 329 (395)
T PLN02652 262 SLVAPRF-QFKGANK--RGIPVSRDPAALLAKYSDPLVY----TGP-IRVRTGHEILRIS--SYLTRNFKSVT--VPFMV 329 (395)
T ss_pred HHhCCCC-cccCccc--ccCCcCCCHHHHHHHhcCCCcc----cCC-chHHHHHHHHHHH--HHHHhhcccCC--CCEEE
Confidence 1110000 0000000 0000000000000000000000 000 0011111111110 01123344554 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
|+|++|.+++++..+.+.+.+... +.+++++|+++|.++.| .++++.+.|.+||++
T Consensus 330 i~G~~D~vvp~~~a~~l~~~~~~~------~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 330 LHGTADRVTDPLASQDLYNEAASR------HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCCC------CceEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 999999999998887776665431 27899999999999887 799999999999974
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-27 Score=197.35 Aligned_cols=283 Identities=13% Similarity=0.108 Sum_probs=172.8
Q ss_pred cCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCC-------------ChHHHHHHHHhhhhccCCCCceEEEEeC
Q 020518 20 NSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-------------NWRSFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 20 ~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
+...+....+|+|+.+|..+. ...++||++|++.+++. .|..++-.=.... +..|.||++|
T Consensus 33 ~~G~~l~~~~~~Y~t~G~ln~-~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lD-----t~~yfvi~~n 106 (389)
T PRK06765 33 EGGRTIPDVQMGYETYGTLNR-AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAID-----TNKYFVISTD 106 (389)
T ss_pred cCCCCcCCceEEEEeccccCC-CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcC-----CCceEEEEec
Confidence 344444667899999998543 34589999999988542 2555433211100 2679999999
Q ss_pred CCCCCCCCCC-----------CC-------CCCCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHcccc
Q 020518 87 LRNHGRSAEI-----------EG-------LDPPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARA 147 (325)
Q Consensus 87 ~~G~G~S~~~-----------~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~ 147 (325)
..|-|.|+.| +. ..+.++++++++++.+++++++++ ++. ++||||||++++.+|.++|+
T Consensus 107 ~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~- 184 (389)
T PRK06765 107 TLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPH- 184 (389)
T ss_pred ccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChH-
Confidence 9998764322 10 013589999999999999999999 886 99999999999999999999
Q ss_pred ccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC---------CCCcH--HHHHHHHHhhccc-hhHHHHH
Q 020518 148 DYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS---------SIPSR--KWLVNHMMELGFS-KSLSEWI 215 (325)
Q Consensus 148 ~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~~~-~~~~~~~ 215 (325)
+|+++|++++.+...... ...........+...+. ..+.. ............. +.+.+-+
T Consensus 185 -------~v~~lv~ia~~~~~~~~~-~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f 256 (389)
T PRK06765 185 -------MVERMIGVIGNPQNDAWT-SVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTF 256 (389)
T ss_pred -------hhheEEEEecCCCCChhH-HHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHc
Confidence 999999999875432110 01111112222222111 00100 0000000000011 1111100
Q ss_pred hhcccCC--------------------CcccccccChhHHHHhhhcccCC-------cccccccCCCCCCcEEEEeeCCC
Q 020518 216 GTNLKKS--------------------GERETWAFNLDGAVQMFNSYREM-------SYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 216 ~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
....... ......+++...+..+....... +....+..++ +|+++|.|++|
T Consensus 257 ~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~--~PtLvI~G~~D 334 (389)
T PRK06765 257 PRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIE--ANVLMIPCKQD 334 (389)
T ss_pred CcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCC--CCEEEEEeCCC
Confidence 0000000 00011122222233332322222 2344555555 89999999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++++..+.+.+.++..+. +++++++++ +||++++|+|+++++.|.+||++
T Consensus 335 ~l~p~~~~~~la~~lp~~~~----~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 335 LLQPPRYNYKMVDILQKQGK----YAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCCHHHHHHHHHHhhhcCC----CeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99999888888888764221 289999986 99999999999999999999964
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-27 Score=182.36 Aligned_cols=266 Identities=16% Similarity=0.178 Sum_probs=180.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
..|..+.+..+-+......+..|+++||++... ..|..++..|+. .||.|+++|++|||.|+.... ...
T Consensus 35 ~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~--------~g~~v~a~D~~GhG~SdGl~~--yi~ 104 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAK--------SGFAVYAIDYEGHGRSDGLHA--YVP 104 (313)
T ss_pred CCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHh--------CCCeEEEeeccCCCcCCCCcc--cCC
Confidence 357888888887754335677899999998876 677789999998 999999999999999998765 677
Q ss_pred CHHHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++..++|+..+++... .+.+..++||||||+|++.++.+.|+ ...++|+++|..............
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--------~w~G~ilvaPmc~i~~~~kp~p~v 176 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--------FWDGAILVAPMCKISEDTKPHPPV 176 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--------ccccceeeecccccCCccCCCcHH
Confidence 99999999999998642 22379999999999999999999999 999999999876555444344344
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
...+..+..+.+.+...+ ........+.+. .......+.... .-.-.......+++. ..++...+..+.
T Consensus 177 ~~~l~~l~~liP~wk~vp--~~d~~~~~~kdp~~r~~~~~npl~y----~g~pRl~T~~ElLr~--~~~le~~l~~vt-- 246 (313)
T KOG1455|consen 177 ISILTLLSKLIPTWKIVP--TKDIIDVAFKDPEKRKILRSDPLCY----TGKPRLKTAYELLRV--TADLEKNLNEVT-- 246 (313)
T ss_pred HHHHHHHHHhCCceeecC--CccccccccCCHHHHHHhhcCCcee----cCCccHHHHHHHHHH--HHHHHHhccccc--
Confidence 444433333322221000 000000011111 111111111111 111112223333332 123334555555
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc----cChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~ 324 (325)
+|.++++|+.|.++.|..++.+.+.+... +.++..+||+=|.++. |+-+.|...|.+||+.
T Consensus 247 vPflilHG~dD~VTDp~~Sk~Lye~A~S~------DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 247 VPFLILHGTDDKVTDPKVSKELYEKASSS------DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred ccEEEEecCCCcccCcHHHHHHHHhccCC------CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 89999999999999999999998888763 3799999999999886 3456788888899864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=219.47 Aligned_cols=264 Identities=17% Similarity=0.180 Sum_probs=155.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+|+|..+|+. ++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+... ..++
T Consensus 10 ~~g~~l~~~~~g~~----~~~~ivllHG~~~~~~~w~~~~~~L~---------~~~~Vi~~D~~G~G~S~~~~~~-~~~~ 75 (582)
T PRK05855 10 SDGVRLAVYEWGDP----DRPTVVLVHGYPDNHEVWDGVAPLLA---------DRFRVVAYDVRGAGRSSAPKRT-AAYT 75 (582)
T ss_pred eCCEEEEEEEcCCC----CCCeEEEEcCCCchHHHHHHHHHHhh---------cceEEEEecCCCCCCCCCCCcc-cccC
Confidence 36789999998763 47899999999999999999999985 7899999999999999865421 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCCCCCCCC--------c
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPGKVKTEN--------S 174 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~~~~~~~--------~ 174 (325)
++++++|+..++++++.+++++|+||||||.+++.++.+. ++ ++..++.++++........ .
T Consensus 76 ~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~--------~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (582)
T PRK05855 76 LARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAG--------RIASFTSVSGPSLDHVGFWLRSGLRRPT 147 (582)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchh--------hhhhheeccCCchHHHHHHHhhcccccc
Confidence 9999999999999998873599999999999999888762 23 4444444443211000000 0
Q ss_pred hhHHHHHHHHhhcC----CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCccccccc---C-hhHHHHhhhcccCCc
Q 020518 175 EGEVEKVLQTLQSL----PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAF---N-LDGAVQMFNSYREMS 246 (325)
Q Consensus 175 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~ 246 (325)
..........+... ....+... .............+................. . ...............
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (582)
T PRK05855 148 PRRLARALGQLLRSWYIYLFHLPVLP---ELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSL 224 (582)
T ss_pred hhhhhHHHHHHhhhHHHHHHhCCCCc---HHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhh
Confidence 00000000000000 00000000 0000000000011101000000000000000 0 000000000000111
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+..+ ++|+++|+|++|.++++...+.+.+..+. .++++++ +||++++|+|+++++.|.+|+..
T Consensus 225 ~~~~~~~~--~~P~lii~G~~D~~v~~~~~~~~~~~~~~--------~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 225 SRPRERYT--DVPVQLIVPTGDPYVRPALYDDLSRWVPR--------LWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred ccCccCCc--cCceEEEEeCCCcccCHHHhccccccCCc--------ceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 11112223 48999999999999999877777665554 7888887 59999999999999999999975
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-27 Score=191.31 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=166.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC-CCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA-EIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~ 103 (325)
.++..+.|..+....+ ...+||++||++.+..-|..++..|.. .||.|+++|+||||.|. ...+ ...
T Consensus 17 ~d~~~~~~~~~~~~~~--~~g~Vvl~HG~~Eh~~ry~~la~~l~~--------~G~~V~~~D~RGhG~S~r~~rg--~~~ 84 (298)
T COG2267 17 ADGTRLRYRTWAAPEP--PKGVVVLVHGLGEHSGRYEELADDLAA--------RGFDVYALDLRGHGRSPRGQRG--HVD 84 (298)
T ss_pred CCCceEEEEeecCCCC--CCcEEEEecCchHHHHHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCCcC--Cch
Confidence 4688999998876422 237899999999999999999999998 99999999999999998 4444 556
Q ss_pred CHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 104 DIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+++++.+|+..+++... .+.+++++||||||.|++.++.+++. +|+++||.+|...... .........
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--------~i~~~vLssP~~~l~~-~~~~~~~~~ 155 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--------RIDGLVLSSPALGLGG-AILRLILAR 155 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--------cccEEEEECccccCCh-hHHHHHHHH
Confidence 69999999999998875 33499999999999999999999998 9999999998765442 000000011
Q ss_pred H-HHHhhcCCCCCCcHHHHHHHHHhh--ccchhHHHHHhhcccCCCcccccccC-hhHHHHhhhcccCCcccccccCCCC
Q 020518 181 V-LQTLQSLPSSIPSRKWLVNHMMEL--GFSKSLSEWIGTNLKKSGERETWAFN-LDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 181 ~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
. ...+..+.....-........... .......+....... ...... ..+......... ..... .....
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~-----~~~~~~~~~w~~~~~~a~~-~~~~~--~~~~~ 227 (298)
T COG2267 156 LALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPL-----IGVGGPVSRWVDLALLAGR-VPALR--DAPAI 227 (298)
T ss_pred HhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCc-----cccCCccHHHHHHHHHhhc-ccchh--ccccc
Confidence 1 111111111111000000000000 000011111111110 011111 111111111111 11111 12334
Q ss_pred CCcEEEEeeCCCCCCC-hHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC-h--HHHHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWD-PDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN-P--KGLLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p--~~~~~~i~~fl~~ 324 (325)
.+|+|+++|++|.+++ .+....+.+.... +++++++++|+.|.++.|. . +++.+.+.+|+..
T Consensus 228 ~~PvLll~g~~D~vv~~~~~~~~~~~~~~~------~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 228 ALPVLLLQGGDDRVVDNVEGLARFFERAGS------PDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred cCCEEEEecCCCccccCcHHHHHHHHhcCC------CCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 5899999999999998 5555444444433 3479999999999999884 4 7888999999864
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=202.54 Aligned_cols=256 Identities=16% Similarity=0.187 Sum_probs=149.1
Q ss_pred cccccceEEEEcccC--CCCCCCceEEEecCCCCCCCC-h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSS--SDRPYTSTAFVLHGLLGSGRN-W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~--~~~~~~~~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+.||..+.+...... ....++|+||++||+++++.. | ..++..+.+ +||+|+++|+||||.|....
T Consensus 78 ~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~--------~g~~vv~~d~rG~G~s~~~~-- 147 (388)
T PLN02511 78 TPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARS--------KGWRVVVFNSRGCADSPVTT-- 147 (388)
T ss_pred CCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH--------CCCEEEEEecCCCCCCCCCC--
Confidence 357777776554321 122457899999999877654 5 456665555 89999999999999997643
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC---CCCEEEEEeChhHHHHHHHHHHccccccCCccCC--cceEEEEecCCCCCCCC-C
Q 020518 100 DPPHDIANAANDLANLVKAKGW---DWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL--PKQLWVLDSVPGKVKTE-N 173 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~--v~~lvli~~~~~~~~~~-~ 173 (325)
.......+++|+.++++++.. +.+++++||||||.+++.++.++|+ + |.++++++++....... .
T Consensus 148 -~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~--------~~~v~~~v~is~p~~l~~~~~~ 218 (388)
T PLN02511 148 -PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGE--------NCPLSGAVSLCNPFDLVIADED 218 (388)
T ss_pred -cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCC--------CCCceEEEEECCCcCHHHHHHH
Confidence 223335667777777777654 1289999999999999999999998 5 88888887543220000 0
Q ss_pred chhHHHHHH-HHhhcCCCCCCcHHHHHH---HHHhh---ccc-------hhHHHHHhhcccCCCcccccccChhHHHHhh
Q 020518 174 SEGEVEKVL-QTLQSLPSSIPSRKWLVN---HMMEL---GFS-------KSLSEWIGTNLKKSGERETWAFNLDGAVQMF 239 (325)
Q Consensus 174 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (325)
....+.... ..+... ...... ..... .+. ....++.. .... .........++
T Consensus 219 ~~~~~~~~y~~~~~~~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~-~~t~------~~~gf~~~~~y- 284 (388)
T PLN02511 219 FHKGFNNVYDKALAKA------LRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDD-GLTR------VSFGFKSVDAY- 284 (388)
T ss_pred HhccHHHHHHHHHHHH------HHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHH-hhhh------hcCCCCCHHHH-
Confidence 000000000 000000 000000 00000 000 00000000 0000 00000011111
Q ss_pred hcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH-----
Q 020518 240 NSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG----- 313 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----- 313 (325)
|...+....+..++ +|+++|+|++|+++++... ....+..++ +++++++++||+.++|+|+.
T Consensus 285 --y~~~s~~~~L~~I~--vPtLiI~g~dDpi~p~~~~~~~~~~~~p~--------~~l~~~~~gGH~~~~E~p~~~~~~~ 352 (388)
T PLN02511 285 --YSNSSSSDSIKHVR--VPLLCIQAANDPIAPARGIPREDIKANPN--------CLLIVTPSGGHLGWVAGPEAPFGAP 352 (388)
T ss_pred --HHHcCchhhhccCC--CCeEEEEcCCCCcCCcccCcHhHHhcCCC--------EEEEECCCcceeccccCCCCCCCCc
Confidence 12223344556665 8999999999999987644 223333333 99999999999999999976
Q ss_pred -HHHHHHHHHhc
Q 020518 314 -LLEIVAPRIAS 324 (325)
Q Consensus 314 -~~~~i~~fl~~ 324 (325)
+.+.|.+||+.
T Consensus 353 w~~~~i~~Fl~~ 364 (388)
T PLN02511 353 WTDPVVMEFLEA 364 (388)
T ss_pred cHHHHHHHHHHH
Confidence 58999999875
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-26 Score=189.20 Aligned_cols=272 Identities=14% Similarity=0.133 Sum_probs=162.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC-Ch-------------------------HHHHHHHHhhhhccCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NW-------------------------RSFSRNLASTLSQTSASS 78 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~-------------------------~~~~~~l~~~~~~~~~~~ 78 (325)
.+|.+|+++.+.+. +.+.+|+++||++.+.. .| ..+++.|.+ .
T Consensus 5 ~~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~--------~ 73 (332)
T TIGR01607 5 KDGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK--------N 73 (332)
T ss_pred CCCCeEEEeeeecc---CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH--------C
Confidence 46888998887653 34779999999999885 11 457888887 8
Q ss_pred ceEEEEeCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhC----------------------C-CCCEEEEEeChhH
Q 020518 79 EWRMVLVDLRNHGRSAEIEG-LDPPHDIANAANDLANLVKAKG----------------------W-DWPDVVIGHSMGG 134 (325)
Q Consensus 79 ~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~l~~~l~~~~----------------------~-~~~~~lvGhS~Gg 134 (325)
||+|+++|+||||.|..... .....+++++++|+..+++... . +.|++++||||||
T Consensus 74 G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg 153 (332)
T TIGR01607 74 GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGG 153 (332)
T ss_pred CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCcc
Confidence 99999999999999986421 0022589999999999998642 1 3389999999999
Q ss_pred HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC-----CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccch
Q 020518 135 KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE-----NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSK 209 (325)
Q Consensus 135 ~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (325)
.+++.++.++++...-.....++++|++++........ .........+..+....+...... . .......
T Consensus 154 ~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~-~~~~~~~ 228 (332)
T TIGR01607 154 NIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----K-IRYEKSP 228 (332)
T ss_pred HHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----c-cccccCh
Confidence 99999998765310000001588999888763221100 001111112221111111100000 0 0000000
Q ss_pred hHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCC
Q 020518 210 SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 289 (325)
...+..... ...............++..... ....+..++.++|+++|+|++|.+++++..+.+.+.+..
T Consensus 229 ~~~~~~~~D----p~~~~~~~s~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~---- 298 (332)
T TIGR01607 229 YVNDIIKFD----KFRYDGGITFNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI---- 298 (332)
T ss_pred hhhhHHhcC----ccccCCcccHHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC----
Confidence 111111110 0000011122333333332211 112334444458999999999999999877766554432
Q ss_pred CCCceeEEEecCCCccccccC-hHHHHHHHHHHHhc
Q 020518 290 SEGKVSVHVLPNAGHWVHVDN-PKGLLEIVAPRIAS 324 (325)
Q Consensus 290 ~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 324 (325)
++++++++++++|.++.|. ++++.+.|.+||..
T Consensus 299 --~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 299 --SNKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred --CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 1379999999999999985 79999999999863
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-26 Score=173.24 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=176.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..+.+..|-..++...+|.++++||++.+...|..++..|... -..+|+++|+||||.+...++ ...+.
T Consensus 56 ~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~-------~~~r~~a~DlRgHGeTk~~~e--~dlS~ 126 (343)
T KOG2564|consen 56 DGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSK-------IRCRCLALDLRGHGETKVENE--DDLSL 126 (343)
T ss_pred CCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhh-------cceeEEEeeccccCccccCCh--hhcCH
Confidence 344445555444443467999999999999999999999999875 467889999999999988776 67999
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
+.++.|+.++++++- +. +++||||||||.+|...|..--= ..+.++++|+..-+ .....+..+.
T Consensus 127 eT~~KD~~~~i~~~fge~~~-~iilVGHSmGGaIav~~a~~k~l-------psl~Gl~viDVVEg-----tAmeAL~~m~ 193 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELPP-QIILVGHSMGGAIAVHTAASKTL-------PSLAGLVVIDVVEG-----TAMEALNSMQ 193 (343)
T ss_pred HHHHHHHHHHHHHHhccCCC-ceEEEeccccchhhhhhhhhhhc-------hhhhceEEEEEech-----HHHHHHHHHH
Confidence 999999999999884 45 89999999999999888765311 14889999997632 2223334445
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchh---HHHHHhhcccCCC--cccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKS---LSEWIGTNLKKSG--ERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
..+...+..+.+.+..+++-......+. ..--+...+.... ....|+.+......++..+.. .+....-. .+
T Consensus 194 ~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~-gLS~~Fl~--~p 270 (343)
T KOG2564|consen 194 HFLRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFK-GLSDKFLG--LP 270 (343)
T ss_pred HHHhcCCccccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHh-hhhhHhhC--CC
Confidence 5566667777766666665544322111 1111111222222 245666666655555554332 11122222 23
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|-++|.++.|..-..-. +.++. .+.++.+++.+||+++.+.|..++..+..|+.+
T Consensus 271 ~~klLilAg~d~LDkdLt-------iGQMQ----Gk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~R 326 (343)
T KOG2564|consen 271 VPKLLILAGVDRLDKDLT-------IGQMQ----GKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIR 326 (343)
T ss_pred ccceeEEecccccCccee-------eeeec----cceeeeeecccCceeccCCcchHHHHHHHHHhh
Confidence 788888888875432211 11111 238999999999999999999999999999853
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=165.32 Aligned_cols=224 Identities=17% Similarity=0.190 Sum_probs=151.8
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL---VKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~---l~~~~ 120 (325)
+..|+|+|||.++....+.+.+.|.+ +||.|.+|.+||||.....- -..+.++|-+++.+. |...+
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e--------~GyTv~aP~ypGHG~~~e~f---l~t~~~DW~~~v~d~Y~~L~~~g 83 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNE--------NGYTVYAPRYPGHGTLPEDF---LKTTPRDWWEDVEDGYRDLKEAG 83 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHH--------CCceEecCCCCCCCCCHHHH---hcCCHHHHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999 99999999999999876432 345566665555444 45557
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC-CCCcHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS-SIPSRKWLV 199 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 199 (325)
.+ .+.++|-||||.+++.+|..+| ++++|.++++...... ...+...+........ ...+...+.
T Consensus 84 y~-eI~v~GlSmGGv~alkla~~~p----------~K~iv~m~a~~~~k~~---~~iie~~l~y~~~~kk~e~k~~e~~~ 149 (243)
T COG1647 84 YD-EIAVVGLSMGGVFALKLAYHYP----------PKKIVPMCAPVNVKSW---RIIIEGLLEYFRNAKKYEGKDQEQID 149 (243)
T ss_pred CC-eEEEEeecchhHHHHHHHhhCC----------ccceeeecCCcccccc---hhhhHHHHHHHHHhhhccCCCHHHHH
Confidence 78 9999999999999999999986 6999999876432222 2222333332222111 111111111
Q ss_pred HHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHH
Q 020518 200 NHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
+.+... .. .+......+..+.. +....++.|. .|++++.|++|++++.+.+..+
T Consensus 150 ~e~~~~-------------~~------~~~~~~~~~~~~i~-----~~~~~~~~I~--~pt~vvq~~~D~mv~~~sA~~I 203 (243)
T COG1647 150 KEMKSY-------------KD------TPMTTTAQLKKLIK-----DARRSLDKIY--SPTLVVQGRQDEMVPAESANFI 203 (243)
T ss_pred HHHHHh-------------hc------chHHHHHHHHHHHH-----HHHhhhhhcc--cchhheecccCCCCCHHHHHHH
Confidence 111100 00 00000111111211 1223445555 7999999999999999998888
Q ss_pred HHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
....... +.++.+++++||.+..+ ..|++.+.|..||+.
T Consensus 204 y~~v~s~------~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 204 YDHVESD------DKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHhccCC------cceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 7777653 37999999999998875 679999999999974
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=186.91 Aligned_cols=273 Identities=15% Similarity=0.138 Sum_probs=145.2
Q ss_pred CCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC
Q 020518 21 SPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98 (325)
Q Consensus 21 ~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 98 (325)
..++.+|..+.+.....+....++|+||++||++++... +..++..|.+ .||+|+++|+||||.+.....
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQK--------RGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHH--------CCCEEEEEeCCCCCCCccCCc
Confidence 345567777665543222223457899999999887554 3457778887 899999999999997754321
Q ss_pred -CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC-chh
Q 020518 99 -LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN-SEG 176 (325)
Q Consensus 99 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~-~~~ 176 (325)
.......++....+..+.++++.. +++++||||||.+++.++.++++. ..+.++|+++++........ ...
T Consensus 107 ~~~~~~~~~D~~~~i~~l~~~~~~~-~~~~vG~S~GG~i~~~~~~~~~~~------~~~~~~v~i~~p~~~~~~~~~~~~ 179 (324)
T PRK10985 107 RIYHSGETEDARFFLRWLQREFGHV-PTAAVGYSLGGNMLACLLAKEGDD------LPLDAAVIVSAPLMLEACSYRMEQ 179 (324)
T ss_pred ceECCCchHHHHHHHHHHHHhCCCC-CEEEEEecchHHHHHHHHHhhCCC------CCccEEEEEcCCCCHHHHHHHHhh
Confidence 001112333333333344445666 899999999999999999887650 13889999987643211000 000
Q ss_pred HHHHHHHH-hhcCCCCCCcHHHHHHHHHh--hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 177 EVEKVLQT-LQSLPSSIPSRKWLVNHMME--LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
........ +... ........... ........ .+...................+......+...+....+..
T Consensus 180 ~~~~~~~~~l~~~-----l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~ 253 (324)
T PRK10985 180 GFSRVYQRYLLNL-----LKANAARKLAAYPGTLPINLA-QLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQ 253 (324)
T ss_pred hHHHHHHHHHHHH-----HHHHHHHHHHhccccccCCHH-HHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhC
Confidence 00000000 0000 00000000000 00000000 0000000000000000011111112222222333445555
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-----HHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-----KGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-----~~~~~~i~~fl~~ 324 (325)
++ +|+++|+|++|.+++++..+.+.+..++ +++++++++||+.++|.. ...-+.+.+|++.
T Consensus 254 i~--~P~lii~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 254 IR--KPTLIIHAKDDPFMTHEVIPKPESLPPN--------VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CC--CCEEEEecCCCCCCChhhChHHHHhCCC--------eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 55 8999999999999998777666554443 899999999999999742 3455666666643
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-22 Score=173.59 Aligned_cols=230 Identities=15% Similarity=0.078 Sum_probs=144.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++..|....+.+. .....|+||++||+.+.. ..|..++..|.+ .||.|+++|+||+|.|.... ...+
T Consensus 177 ~g~~l~g~l~~P~-~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~--------~Gy~vl~~D~pG~G~s~~~~---~~~d 244 (414)
T PRK05077 177 GGGPITGFLHLPK-GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAP--------RGIAMLTIDMPSVGFSSKWK---LTQD 244 (414)
T ss_pred CCcEEEEEEEECC-CCCCccEEEEeCCcccchhhhHHHHHHHHHh--------CCCEEEEECCCCCCCCCCCC---cccc
Confidence 4546665554443 223466777777776653 568888888887 89999999999999997632 2234
Q ss_pred HHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 105 IANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
......++.+++... +.+ ++.++||||||.+++.+|..+|+ +|+++|+++++....... ...
T Consensus 245 ~~~~~~avld~l~~~~~vd~~-ri~l~G~S~GG~~Al~~A~~~p~--------ri~a~V~~~~~~~~~~~~------~~~ 309 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHT-RVAAFGFRFGANVAVRLAYLEPP--------RLKAVACLGPVVHTLLTD------PKR 309 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcc-cEEEEEEChHHHHHHHHHHhCCc--------CceEEEEECCccchhhcc------hhh
Confidence 555556666666655 556 89999999999999999999998 999999998764211000 000
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc-cCCCCCCcE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL-EHPPQGMEI 260 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~ 260 (325)
...+ +.. ....+. ..+. ... .+.......+..+.. .....+ .++ ++|+
T Consensus 310 ~~~~-------p~~--~~~~la---------~~lg----~~~------~~~~~l~~~l~~~sl-~~~~~l~~~i--~~Pv 358 (414)
T PRK05077 310 QQQV-------PEM--YLDVLA---------SRLG----MHD------ASDEALRVELNRYSL-KVQGLLGRRC--PTPM 358 (414)
T ss_pred hhhc-------hHH--HHHHHH---------HHhC----CCC------CChHHHHHHhhhccc-hhhhhhccCC--CCcE
Confidence 0000 000 000000 0000 000 000111111111110 000011 233 4899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|+|++|.++|++..+.+.+..++ .+++++|++ ++.+.++++++.|.+||+.
T Consensus 359 LiI~G~~D~ivP~~~a~~l~~~~~~--------~~l~~i~~~---~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 359 LSGYWKNDPFSPEEDSRLIASSSAD--------GKLLEIPFK---PVYRNFDKALQEISDWLED 411 (414)
T ss_pred EEEecCCCCCCCHHHHHHHHHhCCC--------CeEEEccCC---CccCCHHHHHHHHHHHHHH
Confidence 9999999999999988877766654 899999986 5668999999999999974
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-22 Score=164.19 Aligned_cols=231 Identities=14% Similarity=0.069 Sum_probs=133.1
Q ss_pred CCceEEEecCCCCC----CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGS----GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++||++||++.. ...|..+++.|++ .||+|+++|+||||.|... ..+++++.+|+.++++.
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~--------~G~~v~~~Dl~G~G~S~~~-----~~~~~~~~~d~~~~~~~ 91 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAE--------AGFPVLRFDYRGMGDSEGE-----NLGFEGIDADIAAAIDA 91 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHH--------CCCEEEEeCCCCCCCCCCC-----CCCHHHHHHHHHHHHHH
Confidence 35678888887642 2335566777876 8999999999999998753 35677888888888877
Q ss_pred h-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 020518 119 K-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP 193 (325)
Q Consensus 119 ~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (325)
+ +.+ +++++||||||.+++.+|.. ++ +|+++|++++........ ............ ...
T Consensus 92 l~~~~~g~~-~i~l~G~S~Gg~~a~~~a~~-~~--------~v~~lil~~p~~~~~~~~-~~~~~~~~~~~~--~~~--- 155 (274)
T TIGR03100 92 FREAAPHLR-RIVAWGLCDAASAALLYAPA-DL--------RVAGLVLLNPWVRTEAAQ-AASRIRHYYLGQ--LLS--- 155 (274)
T ss_pred HHhhCCCCC-cEEEEEECHHHHHHHHHhhh-CC--------CccEEEEECCccCCcccc-hHHHHHHHHHHH--HhC---
Confidence 6 456 89999999999999999875 45 799999999763321111 111111110000 000
Q ss_pred cHHHHHHHHHhhc--cchhHHHHHhhcccC-CCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCC
Q 020518 194 SRKWLVNHMMELG--FSKSLSEWIGTNLKK-SGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDR 270 (325)
Q Consensus 194 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 270 (325)
. .....+.... +.............. ....... ... ...+....+..+. +|+++++|++|..
T Consensus 156 -~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~l~~~~--~P~ll~~g~~D~~ 220 (274)
T TIGR03100 156 -A-DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVA---HGG--------LAERMKAGLERFQ--GPVLFILSGNDLT 220 (274)
T ss_pred -h-HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcc---cch--------HHHHHHHHHHhcC--CcEEEEEcCcchh
Confidence 0 0001000000 000000000000000 0000000 000 0111223344443 8999999999987
Q ss_pred CChHHH------HHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 271 WDPDVI------QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 271 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
.+ ... ....+.+.. ++++++.+++++|++..| .++++.+.|.+||++
T Consensus 221 ~~-~~~~~~~~~~~~~~~l~~------~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 221 AQ-EFADSVLGEPAWRGALED------PGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HH-HHHHHhccChhhHHHhhc------CCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 53 222 233333321 138999999999999555 569999999999964
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-22 Score=153.30 Aligned_cols=186 Identities=18% Similarity=0.163 Sum_probs=126.3
Q ss_pred ceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 45 STAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
|+|||+||++++...|.. +.+.+.+.. .+|+|+++|+|||+ ++.++++.+++++++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~------~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~ 61 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH------PDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGD 61 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC------CCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCC
Confidence 589999999999999985 345565433 58999999999874 36888999999999988
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++++||||||.+++.+|.++|. + +|+++++... ...+..+.....
T Consensus 62 -~~~lvG~S~Gg~~a~~~a~~~~~--------~---~vl~~~~~~~----------~~~~~~~~~~~~------------ 107 (190)
T PRK11071 62 -PLGLVGSSLGGYYATWLSQCFML--------P---AVVVNPAVRP----------FELLTDYLGENE------------ 107 (190)
T ss_pred -CeEEEEECHHHHHHHHHHHHcCC--------C---EEEECCCCCH----------HHHHHHhcCCcc------------
Confidence 99999999999999999999874 3 5788875321 111111100000
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
... ....+........+. . ..+ +..++.++|+++|+|.+|..++++.+..+.+
T Consensus 108 -----------------~~~-~~~~~~~~~~~~~d~-~---~~~----~~~i~~~~~v~iihg~~De~V~~~~a~~~~~- 160 (190)
T PRK11071 108 -----------------NPY-TGQQYVLESRHIYDL-K---VMQ----IDPLESPDLIWLLQQTGDEVLDYRQAVAYYA- 160 (190)
T ss_pred -----------------ccc-CCCcEEEcHHHHHHH-H---hcC----CccCCChhhEEEEEeCCCCcCCHHHHHHHHH-
Confidence 000 000011111111111 1 111 1223344789999999999999988766655
Q ss_pred hhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
. ++.++++|++|.. ...+++.+.|.+|+.
T Consensus 161 --~--------~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 161 --A--------CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred --h--------cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 3 6777889999988 455999999999985
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=159.30 Aligned_cols=222 Identities=14% Similarity=0.087 Sum_probs=133.9
Q ss_pred ccccceEEEEcccCC-CCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS-DRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~~ 102 (325)
.+|..|.-+...+.. .....++||++||+++....+..+++.|.+ .||.|+.+|.||+ |.|+.... .
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~--------~G~~vLrfD~rg~~GeS~G~~~---~ 85 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSS--------NGFHVIRYDSLHHVGLSSGTID---E 85 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHH--------CCCEEEEecCCCCCCCCCCccc---c
Confidence 468888877766532 234568899999999987778899999998 9999999999988 99976432 2
Q ss_pred CCHHHHHHHHH---HHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 103 HDIANAANDLA---NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~---~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
.+......|+. ++++..+.+ ++.|+||||||.+|+..|.+ . .++.+|+.+|..... ..+.
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~~~~-~I~LiG~SmGgava~~~A~~--~--------~v~~lI~~sp~~~l~------d~l~ 148 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTRGIN-NLGLIAASLSARIAYEVINE--I--------DLSFLITAVGVVNLR------DTLE 148 (307)
T ss_pred CcccccHHHHHHHHHHHHhcCCC-ceEEEEECHHHHHHHHHhcC--C--------CCCEEEEcCCcccHH------HHHH
Confidence 33333355654 444444666 89999999999999777763 2 588888888764321 0111
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcc--c-CCcccccccCCCC
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY--R-EMSYWPLLEHPPQ 256 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 256 (325)
..+.... ...+ .......+ .-.........+......+ . .......+..++
T Consensus 149 ~~~~~~~---~~~p-~~~lp~~~---------------------d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~- 202 (307)
T PRK13604 149 RALGYDY---LSLP-IDELPEDL---------------------DFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLD- 202 (307)
T ss_pred Hhhhccc---ccCc-cccccccc---------------------ccccccccHHHHHHHHHhcCccccccHHHHHhhcC-
Confidence 1000000 0000 00000000 0000000000011100000 0 001112233343
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH 307 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 307 (325)
+|+|+|+|..|+.++++.++.+.+.+.. .+++++++||++|.+.
T Consensus 203 -~PvLiIHG~~D~lVp~~~s~~l~e~~~s------~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 203 -IPFIAFTANNDSWVKQSEVIDLLDSIRS------EQCKLYSLIGSSHDLG 246 (307)
T ss_pred -CCEEEEEcCCCCccCHHHHHHHHHHhcc------CCcEEEEeCCCccccC
Confidence 7999999999999999999888887653 1289999999999875
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-24 Score=171.48 Aligned_cols=215 Identities=20% Similarity=0.251 Sum_probs=130.4
Q ss_pred eEEEEeCCCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCc
Q 020518 80 WRMVLVDLRNHGRSAE---IEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 80 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
|+|+++|+||+|.|++ ... ..++.+++++++..+++.++.+ +++++||||||.+++.+|+++|+ +|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~--------~v 69 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDF--PDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPE--------RV 69 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGS--CTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGG--------GE
T ss_pred CEEEEEeCCCCCCCCCCccCCc--ccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCch--------hh
Confidence 6899999999999995 333 7899999999999999999999 89999999999999999999999 99
Q ss_pred ceEEEEecCCC--C-CCCCCchh-HHHHHH-HHhhcCCCCCCcHHHHHHHHH-------hhccchhHHHHHhhcccCCCc
Q 020518 157 KQLWVLDSVPG--K-VKTENSEG-EVEKVL-QTLQSLPSSIPSRKWLVNHMM-------ELGFSKSLSEWIGTNLKKSGE 224 (325)
Q Consensus 157 ~~lvli~~~~~--~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 224 (325)
+++|++++++. . ........ ...... ....... ............ .....................
T Consensus 70 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (230)
T PF00561_consen 70 KKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFL--SDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAE 147 (230)
T ss_dssp EEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCH
T ss_pred cCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccc--cccchhhhhhhhhheeeccCccccchhhccchhhhhHHHH
Confidence 99999998630 0 00000000 000000 0000000 000000000000 000000000000000000000
Q ss_pred ccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCc
Q 020518 225 RETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGH 304 (325)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 304 (325)
.... ..........+...+....+..++ +|++++.|++|..++++....+.+.+++ .++++++++||
T Consensus 148 -~~~~--~~~~~~~~~~~~~~~~~~~l~~i~--~p~l~i~~~~D~~~p~~~~~~~~~~~~~--------~~~~~~~~~GH 214 (230)
T PF00561_consen 148 -TDAF--DNMFWNALGYFSVWDPSPALSNIK--VPTLIIWGEDDPLVPPESSEQLAKLIPN--------SQLVLIEGSGH 214 (230)
T ss_dssp -HHHH--HHHHHHHHHHHHHHHHHHHHTTTT--SEEEEEEETTCSSSHHHHHHHHHHHSTT--------EEEEEETTCCS
T ss_pred -HHHH--hhhccccccccccccccccccccC--CCeEEEEeCCCCCCCHHHHHHHHHhcCC--------CEEEECCCCCh
Confidence 0000 000000111122222333444554 8999999999999999988888888887 99999999999
Q ss_pred cccccChHHHHHHHHH
Q 020518 305 WVHVDNPKGLLEIVAP 320 (325)
Q Consensus 305 ~~~~e~p~~~~~~i~~ 320 (325)
+.+++.|+++++.|.+
T Consensus 215 ~~~~~~~~~~~~~i~~ 230 (230)
T PF00561_consen 215 FAFLEGPDEFNEIIIK 230 (230)
T ss_dssp THHHHSHHHHHHHHH-
T ss_pred HHHhcCHHhhhhhhcC
Confidence 9999999999998863
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-22 Score=168.61 Aligned_cols=279 Identities=15% Similarity=0.077 Sum_probs=159.2
Q ss_pred ccccccceEEEEcccCCC---CCCCceEEEecCCCCCCCChH------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSD---RPYTSTAFVLHGLLGSGRNWR------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
+++||..|....+....+ ...+|+|+|+||+++++..|. .+...|++ +||+|+++|+||++.|
T Consensus 50 ~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~--------~GydV~l~n~RG~~~s 121 (395)
T PLN02872 50 QTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD--------HGFDVWVGNVRGTRWS 121 (395)
T ss_pred ECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh--------CCCCcccccccccccc
Confidence 447899998887643221 134789999999999998884 34445665 8999999999998866
Q ss_pred CCCC-----C-CCCCCCHHHHH-HHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 94 AEIE-----G-LDPPHDIANAA-NDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 94 ~~~~-----~-~~~~~~~~~~~-~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
.... + ....+++++++ .|+.++++.+ ..+ +++++||||||.+++.++ .+|+. ..+|+.+++++
T Consensus 122 ~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~-~v~~VGhS~Gg~~~~~~~-~~p~~-----~~~v~~~~~l~ 194 (395)
T PLN02872 122 YGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNS-KIFIVGHSQGTIMSLAAL-TQPNV-----VEMVEAAALLC 194 (395)
T ss_pred cCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCC-ceEEEEECHHHHHHHHHh-hChHH-----HHHHHHHHHhc
Confidence 3211 1 00257899999 7999999876 346 999999999999998555 56751 12588888888
Q ss_pred cCCCCCCCCCchh-HHHH-HHHHh---hcCCCCCCc---HHHHHHHHHhhc----------------cchhH-HHHHhhc
Q 020518 164 SVPGKVKTENSEG-EVEK-VLQTL---QSLPSSIPS---RKWLVNHMMELG----------------FSKSL-SEWIGTN 218 (325)
Q Consensus 164 ~~~~~~~~~~~~~-~~~~-~~~~~---~~~~~~~~~---~~~~~~~~~~~~----------------~~~~~-~~~~~~~ 218 (325)
|............ .+.. .+..+ .....-.+. ...+...+.... +.... ..++...
T Consensus 195 P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~ 274 (395)
T PLN02872 195 PISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYE 274 (395)
T ss_pred chhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcC
Confidence 8754322111111 0000 00001 100010111 111111111000 00000 0000000
Q ss_pred ccC------------CCcccccccChhHHHHhhhcccCCc-ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhh
Q 020518 219 LKK------------SGERETWAFNLDGAVQMFNSYREMS-YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANR 285 (325)
Q Consensus 219 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 285 (325)
... ........++..... -...|.+.. ..-.+.+++.++|+++++|++|..++++.++.+.+.++.
T Consensus 275 pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~-n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 275 PHPSSVKNLRHLFQMIRKGTFAHYDYGIFK-NLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCcchHHHHHHHHHHHhcCCcccCCCCchh-hHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 000 000001111111111 111122211 111345555458999999999999999887777666653
Q ss_pred cCCCCCCceeEEEecCCCccc---cccChHHHHHHHHHHHhc
Q 020518 286 QGDGSEGKVSVHVLPNAGHWV---HVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~gH~~---~~e~p~~~~~~i~~fl~~ 324 (325)
..+++.++++||.. ..+.|+++.+.|.+||++
T Consensus 354 -------~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 354 -------KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred -------ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 15788899999963 448899999999999974
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-21 Score=156.20 Aligned_cols=209 Identities=19% Similarity=0.182 Sum_probs=126.5
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH-------HHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI-------ANAANDLANL 115 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~-------~~~~~~l~~~ 115 (325)
..|+||++||++++...|..++..|.+ .||+|+++|+||||.+.... ....+ .+..+++.++
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQ--------AGFRVIMPDAPMHGARFSGD---EARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHh--------CCCEEEEecCCcccccCCCc---cccchhhHHHHHHHHHHHHHHH
Confidence 468999999999999899999999987 89999999999999864321 11111 1223344333
Q ss_pred HHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 116 VKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 116 l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
++.+ +.+ +++++|||+||.+++.++.++|+ ....++++++.. . ......+. .
T Consensus 95 ~~~l~~~~~~~~~-~i~v~G~S~Gg~~al~~~~~~~~--------~~~~~~~~~~~~-~----------~~~~~~~~--~ 152 (249)
T PRK10566 95 RAAIREEGWLLDD-RLAVGGASMGGMTALGIMARHPW--------VKCVASLMGSGY-F----------TSLARTLF--P 152 (249)
T ss_pred HHHHHhcCCcCcc-ceeEEeecccHHHHHHHHHhCCC--------eeEEEEeeCcHH-H----------HHHHHHhc--c
Confidence 3332 345 89999999999999999999886 333334433221 0 00000000 0
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
...... .. ........+......+....+.++ .++|+++|+|++|.
T Consensus 153 ~~~~~~------------~~---------------------~~~~~~~~~~~~~~~~~~~~~~~i-~~~P~Lii~G~~D~ 198 (249)
T PRK10566 153 PLIPET------------AA---------------------QQAEFNNIVAPLAEWEVTHQLEQL-ADRPLLLWHGLADD 198 (249)
T ss_pred cccccc------------cc---------------------cHHHHHHHHHHHhhcChhhhhhhc-CCCCEEEEEcCCCC
Confidence 000000 00 000000001111111111222332 13799999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.++++..+.+.+.++..+. +.++++..++++||.+. + ...+.+.+||++
T Consensus 199 ~v~~~~~~~l~~~l~~~g~--~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 199 VVPAAESLRLQQALRERGL--DKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred cCCHHHHHHHHHHHHhcCC--CcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 9999999988887765432 01278889999999864 3 456788888864
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.4e-21 Score=163.34 Aligned_cols=260 Identities=15% Similarity=0.149 Sum_probs=146.4
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCCh-----HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-----RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
+..+.+.+......++|||++||+..+...+ ..+++.|.+ .||+|+++|++|+|.|.. ..+
T Consensus 48 ~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~--------~G~~V~~~D~~g~g~s~~------~~~ 113 (350)
T TIGR01836 48 VVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE--------RGQDVYLIDWGYPDRADR------YLT 113 (350)
T ss_pred EEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHH--------CCCeEEEEeCCCCCHHHh------cCC
Confidence 3444444432223467899999987655444 578999987 899999999999998754 345
Q ss_pred HHHHHHH-H----HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH--
Q 020518 105 IANAAND-L----ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE-- 177 (325)
Q Consensus 105 ~~~~~~~-l----~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~-- 177 (325)
+++++.+ + ..+++..+.+ +++++||||||.+++.+++++|+ +|+++|+++++............
T Consensus 114 ~~d~~~~~~~~~v~~l~~~~~~~-~i~lvGhS~GG~i~~~~~~~~~~--------~v~~lv~~~~p~~~~~~~~~~~~~~ 184 (350)
T TIGR01836 114 LDDYINGYIDKCVDYICRTSKLD-QISLLGICQGGTFSLCYAALYPD--------KIKNLVTMVTPVDFETPGNMLSNWA 184 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-cccEEEECHHHHHHHHHHHhCch--------heeeEEEeccccccCCCCchhhhhc
Confidence 6666533 3 3444556777 99999999999999999999999 99999999986543321111100
Q ss_pred ----HHHHHHHhhcCCCC---------CCc---HHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhc
Q 020518 178 ----VEKVLQTLQSLPSS---------IPS---RKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS 241 (325)
Q Consensus 178 ----~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (325)
.......+..++.. .+. ..............+...++.... ..... ...........++..
T Consensus 185 ~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~d--~~~~~~~~~~~~~~~ 261 (350)
T TIGR01836 185 RHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRME-KWIFD--SPDQAGEAFRQFVKD 261 (350)
T ss_pred cccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHH-HHhcC--CcCccHHHHHHHHHH
Confidence 01111111000000 000 000000000000011111111000 00000 000001111111111
Q ss_pred ----cc--C-----CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC
Q 020518 242 ----YR--E-----MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN 310 (325)
Q Consensus 242 ----~~--~-----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 310 (325)
.. . ......+..+ ++|+++++|++|.+++++..+.+.+.++. ++.++++++ +||...+..
T Consensus 262 ~~~~n~l~~g~~~~~~~~~~l~~i--~~Pvliv~G~~D~i~~~~~~~~~~~~~~~------~~~~~~~~~-~gH~~~~~~ 332 (350)
T TIGR01836 262 FYQQNGLINGEVEIGGRKVDLKNI--KMPILNIYAERDHLVPPDASKALNDLVSS------EDYTELSFP-GGHIGIYVS 332 (350)
T ss_pred HHhcCcccCCeeEECCEEccHHhC--CCCeEEEecCCCCcCCHHHHHHHHHHcCC------CCeEEEEcC-CCCEEEEEC
Confidence 00 0 0011123334 48999999999999999888888777654 126788888 599988765
Q ss_pred ---hHHHHHHHHHHHhc
Q 020518 311 ---PKGLLEIVAPRIAS 324 (325)
Q Consensus 311 ---p~~~~~~i~~fl~~ 324 (325)
++++...|.+||.+
T Consensus 333 ~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 333 GKAQKEVPPAIGKWLQA 349 (350)
T ss_pred chhHhhhhHHHHHHHHh
Confidence 48899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-21 Score=166.08 Aligned_cols=254 Identities=11% Similarity=0.060 Sum_probs=151.6
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChH-----HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR-----SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+....|.+..+...++|||++||+......|+ .++..|.+ +||+|+++|++|+|.|...... ..|
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~--------qGf~V~~iDwrgpg~s~~~~~~-ddY 243 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE--------QGHTVFVISWRNPDASQADKTF-DDY 243 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHH--------CCcEEEEEECCCCCcccccCCh-hhh
Confidence 455555655433346799999999998888885 79999998 8999999999999988664321 345
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHH----HHHHHc-cccccCCccCCcceEEEEecCCCCCCCCCch---
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVAL----HFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTENSE--- 175 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~----~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~--- 175 (325)
..+.+.+.+..+++.++.+ +++++||||||.++. .+++.. ++ +|++++++++...........
T Consensus 244 ~~~~i~~al~~v~~~~g~~-kv~lvG~cmGGtl~a~ala~~aa~~~~~--------rv~slvll~t~~Df~~~G~l~~f~ 314 (532)
T TIGR01838 244 IRDGVIAALEVVEAITGEK-QVNCVGYCIGGTLLSTALAYLAARGDDK--------RIKSATFFTTLLDFSDPGELGVFV 314 (532)
T ss_pred HHHHHHHHHHHHHHhcCCC-CeEEEEECcCcHHHHHHHHHHHHhCCCC--------ccceEEEEecCcCCCCcchhhhhc
Confidence 5566777788888888888 999999999999852 345555 67 899999999876544321110
Q ss_pred --hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhH-HHHHhhcccCCC----cccccc-----cChhHHHHhhhcc-
Q 020518 176 --GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL-SEWIGTNLKKSG----ERETWA-----FNLDGAVQMFNSY- 242 (325)
Q Consensus 176 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~- 242 (325)
..+...-+.+.. .... ....+...+......... ..++...+.... .-..|. ........+++.+
T Consensus 315 ~~~~~~~~e~~~~~-~G~l-pg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly 392 (532)
T TIGR01838 315 DEEIVAGIERQNGG-GGYL-DGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLY 392 (532)
T ss_pred CchhHHHHHHHHHh-cCCC-CHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHH
Confidence 001011111111 1111 111111111111111111 111111111000 000111 1112222222111
Q ss_pred c----------CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH
Q 020518 243 R----------EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK 312 (325)
Q Consensus 243 ~----------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 312 (325)
. ..+....+..++ +|+++|.|++|.+++++..+.+.+.+++ .+..+++++||.+++++|.
T Consensus 393 ~~N~L~~G~~~v~g~~~dL~~I~--vPvLvV~G~~D~IvP~~sa~~l~~~i~~--------~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 393 LQNALTTGGLEVCGVRLDLSKVK--VPVYIIATREDHIAPWQSAYRGAALLGG--------PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hcCCCcCCeeEECCEecchhhCC--CCEEEEeeCCCCcCCHHHHHHHHHHCCC--------CEEEEECCCCCchHhhCCC
Confidence 1 112223444554 8999999999999999988888777765 7888999999999999874
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-19 Score=140.04 Aligned_cols=239 Identities=15% Similarity=0.178 Sum_probs=152.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
..+||-+||-+++..+|+.+.+.|.+ .|.|+|.+++||+|.+..+.+ ..|+-.+...-+.++++.++++.
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~--------~~iR~I~iN~PGf~~t~~~~~--~~~~n~er~~~~~~ll~~l~i~~ 104 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDE--------AGIRFIGINYPGFGFTPGYPD--QQYTNEERQNFVNALLDELGIKG 104 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHH--------cCeEEEEeCCCCCCCCCCCcc--cccChHHHHHHHHHHHHHcCCCC
Confidence 45899999999999999999999998 999999999999999999887 78999999999999999999988
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMM 203 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (325)
+++++|||.|+-.|+.+|..+| +.++++++|+................+.++...... ...+.+.
T Consensus 105 ~~i~~gHSrGcenal~la~~~~----------~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~-----~~~~~i~ 169 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTHP----------LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPR-----FIINAIM 169 (297)
T ss_pred ceEEEEeccchHHHHHHHhcCc----------cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhH-----HHHHHHH
Confidence 9999999999999999999985 469999998754432222211111222222111100 1111111
Q ss_pred hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc---cccccCCC-CCCcEEEEeeCCCCCCChHHHHHH
Q 020518 204 ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY---WPLLEHPP-QGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
... -+++.- +.... +......+.....++ ...++.++ .++|+++++|++|..+..+...+.
T Consensus 170 ~~~-----y~~iG~--KV~~G--------eeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~ 234 (297)
T PF06342_consen 170 YFY-----YRMIGF--KVSDG--------EEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEF 234 (297)
T ss_pred HHH-----HHHhCe--eecCh--------HHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHH
Confidence 000 000000 00000 001111111111111 11122221 248999999999988877666555
Q ss_pred HHHhhhcCC--------------------CCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 280 EGLANRQGD--------------------GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 280 ~~~~~~~~~--------------------~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
......+.. .+. +..-+.+.+.||+.+-.+++.+++.+.+.|+
T Consensus 235 a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~-~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 235 AMKFKGLDHFNIEKEISEEEKPKILKSFASGQ-KGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHhCCccceeeecCCChhHHHHHHHHHhcCC-ceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 443322100 000 1334456666999999999999999987763
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-20 Score=151.98 Aligned_cols=116 Identities=34% Similarity=0.529 Sum_probs=93.9
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
...+.|...+.. +++++++||++++...|......+.... ..|+++++|+||||.|. . ..++..
T Consensus 9 ~~~~~~~~~~~~-----~~~i~~~hg~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~~g~g~s~-~----~~~~~~ 72 (282)
T COG0596 9 GVRLAYREAGGG-----GPPLVLLHGFPGSSSVWRPVFKVLPALA------ARYRVIAPDLRGHGRSD-P----AGYSLS 72 (282)
T ss_pred CeEEEEeecCCC-----CCeEEEeCCCCCchhhhHHHHHHhhccc------cceEEEEecccCCCCCC-c----ccccHH
Confidence 445666666653 5599999999999999988444444321 12899999999999997 1 134555
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..++++..++++++.. +++++||||||.+++.++.++|+ +++++|++++...
T Consensus 73 ~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~~ 124 (282)
T COG0596 73 AYADDLAALLDALGLE-KVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCCC
Confidence 5599999999999999 89999999999999999999999 9999999997654
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.5e-20 Score=139.10 Aligned_cols=225 Identities=21% Similarity=0.258 Sum_probs=150.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
..+..++++|=.|+++..|+.+...|. ....++++++||+|.....+ ...+++++++.|..-+...-.
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp---------~~iel~avqlPGR~~r~~ep---~~~di~~Lad~la~el~~~~~ 72 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP---------ADIELLAVQLPGRGDRFGEP---LLTDIESLADELANELLPPLL 72 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC---------chhheeeecCCCcccccCCc---ccccHHHHHHHHHHHhccccC
Confidence 347789999999999999999988777 56799999999999886654 578999999999998884333
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC-----CCchhHHHHHHHHhhcCCCCCCcHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT-----ENSEGEVEKVLQTLQSLPSSIPSRK 196 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (325)
+.++.++||||||++|.++|.+... ....+..+++.++.++.... ......+.+.+..+...+......
T Consensus 73 d~P~alfGHSmGa~lAfEvArrl~~-----~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led- 146 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVARRLER-----AGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLED- 146 (244)
T ss_pred CCCeeecccchhHHHHHHHHHHHHH-----cCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcC-
Confidence 4499999999999999999988755 11246677777665432111 111111112222221111111111
Q ss_pred HHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH
Q 020518 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI 276 (325)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 276 (325)
.++.+++... ...-......|.- ....+..||+.++.|++|..++.+..
T Consensus 147 ------------~El~~l~LPi-------------lRAD~~~~e~Y~~------~~~~pl~~pi~~~~G~~D~~vs~~~~ 195 (244)
T COG3208 147 ------------PELMALFLPI-------------LRADFRALESYRY------PPPAPLACPIHAFGGEKDHEVSRDEL 195 (244)
T ss_pred ------------HHHHHHHHHH-------------HHHHHHHhccccc------CCCCCcCcceEEeccCcchhccHHHH
Confidence 1111111111 1111112222221 12234459999999999999999887
Q ss_pred HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 277 QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+.+.... ..++.+++| |||...++.+++.+.|.+.+.
T Consensus 196 ~~W~~~t~~-------~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 196 GAWREHTKG-------DFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHHHHhhcC-------CceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 777766653 389999998 999999999999999998874
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.1e-20 Score=147.35 Aligned_cols=278 Identities=16% Similarity=0.188 Sum_probs=177.0
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-----------hHHHHHHHHhhhhccCCCCceEEEEeCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-----------WRSFSRNLASTLSQTSASSEWRMVLVDL 87 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~vi~~D~ 87 (325)
+++..+.+...+.|+.+|.... .....|+++||+.+++.. |..++-.=... -+..|.||+.|-
T Consensus 27 le~G~~l~~~~vay~T~Gtln~-~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~i-----Dt~r~fvIc~Nv 100 (368)
T COG2021 27 LESGGVLSDARVAYETYGTLNA-EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPI-----DTERFFVICTNV 100 (368)
T ss_pred ecCCCcccCcEEEEEecccccc-cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCC-----CccceEEEEecC
Confidence 3344555677899999998543 446789999999996533 33332211000 025699999999
Q ss_pred CCCC-CCCCCCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCCccCC
Q 020518 88 RNHG-RSAEIEGLD----------PPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVAL 155 (325)
Q Consensus 88 ~G~G-~S~~~~~~~----------~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~ 155 (325)
.|.+ .|+.|.... +.+++.|++..-+.+++++|++ ++. +||-||||+.|++++.+||+ +
T Consensus 101 lG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~yPd--------~ 171 (368)
T COG2021 101 LGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRYPD--------R 171 (368)
T ss_pred CCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhChH--------H
Confidence 9976 555544221 4578999999999999999999 655 99999999999999999999 9
Q ss_pred cceEEEEecCCCCCCCCCchhHHHHHH-HHhhcCCCC---------CCcH-HHHHHHHH--hhccchhHHHHHhh-----
Q 020518 156 PKQLWVLDSVPGKVKTENSEGEVEKVL-QTLQSLPSS---------IPSR-KWLVNHMM--ELGFSKSLSEWIGT----- 217 (325)
Q Consensus 156 v~~lvli~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~-~~~~~~~~--~~~~~~~~~~~~~~----- 217 (325)
|++++.+++++....... .+.... +.+..-+.. .+.. ....+.+. .......+.+.+..
T Consensus 172 V~~~i~ia~~~r~s~~~i---a~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~ 248 (368)
T COG2021 172 VRRAIPIATAARLSAQNI---AFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQAD 248 (368)
T ss_pred HhhhheecccccCCHHHH---HHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccccc
Confidence 999999998754432111 111111 111111111 0000 01111110 01111111111111
Q ss_pred -------------cccCCCcccccccChhHHHHhhhcccCCccccc-------ccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 218 -------------NLKKSGERETWAFNLDGAVQMFNSYREMSYWPL-------LEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 218 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
.+.....+...+++...+..+.+.....+.... +++++ +|++++--..|..+|++..+
T Consensus 249 ~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~--~~~lv~gi~sD~lfp~~~~~ 326 (368)
T COG2021 249 PLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIK--APVLVVGITSDWLFPPELQR 326 (368)
T ss_pred ccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCc--cCEEEEEecccccCCHHHHH
Confidence 111122334445666666666555555554443 66666 89999999999999999988
Q ss_pred HHHHHhhhcCCCCCCcee-EEEec-CCCccccccChHHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVS-VHVLP-NAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+.+.++. +. +++++ ..||..++...+.+...|.+||+.
T Consensus 327 ~~~~~L~~--------~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 327 ALAEALPA--------AGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHHhccc--------cCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 88888876 33 65654 479999999999999999999975
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-19 Score=167.26 Aligned_cols=256 Identities=13% Similarity=0.161 Sum_probs=150.1
Q ss_pred ceEEEEcccCCC----CCCCceEEEecCCCCCCCChHHH-----HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSD----RPYTSTAFVLHGLLGSGRNWRSF-----SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 29 ~l~y~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
.+..+.|.+... ...++||||+||++.+...|+.. ++.|.+ .||+|+++| +|.|+.+...
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~--------~g~~v~~~d---~G~~~~~~~~ 116 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHR--------AGLDPWVID---FGSPDKVEGG 116 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHH--------CCCEEEEEc---CCCCChhHcC
Confidence 444455544321 24679999999999999999864 788876 899999999 4666654321
Q ss_pred CCCCCHHHHHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCCC--
Q 020518 100 DPPHDIANAANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTEN-- 173 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~-- 173 (325)
...++.+++..+.+.++. ...+ +++++||||||.+++.+++.+ ++ +|+++|+++++........
T Consensus 117 -~~~~l~~~i~~l~~~l~~v~~~~~~-~v~lvG~s~GG~~a~~~aa~~~~~--------~v~~lvl~~~~~d~~~~~~~~ 186 (994)
T PRK07868 117 -MERNLADHVVALSEAIDTVKDVTGR-DVHLVGYSQGGMFCYQAAAYRRSK--------DIASIVTFGSPVDTLAALPMG 186 (994)
T ss_pred -ccCCHHHHHHHHHHHHHHHHHhhCC-ceEEEEEChhHHHHHHHHHhcCCC--------ccceEEEEecccccCCCCccc
Confidence 236778877777766654 3456 899999999999999998755 55 8999999888743321100
Q ss_pred chhHH-HH---H-HHHhhcCCCCCCcH-H-------------HHHHHHHhhccchh-------HHHHHhhcccCCCcccc
Q 020518 174 SEGEV-EK---V-LQTLQSLPSSIPSR-K-------------WLVNHMMELGFSKS-------LSEWIGTNLKKSGERET 227 (325)
Q Consensus 174 ~~~~~-~~---~-~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 227 (325)
..... .. + ...+.... ..+.. . .....+........ ..++.... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~--------~ 257 (994)
T PRK07868 187 IPAGLAAAAADFMADHVFNRL-DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESE--------G 257 (994)
T ss_pred chhhhhhcccccchhhhhhcC-CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHh--------h
Confidence 00000 00 0 00000000 00100 0 00000000000000 00111000 0
Q ss_pred c-ccChhHHHHhhhcccC--------Ccc---cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCcee
Q 020518 228 W-AFNLDGAVQMFNSYRE--------MSY---WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVS 295 (325)
Q Consensus 228 ~-~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (325)
| .........+...+.. ... ...+.+++ +|+|+|+|++|.+++++..+.+.+.+++ .+
T Consensus 258 w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~--~P~L~i~G~~D~ivp~~~~~~l~~~i~~--------a~ 327 (994)
T PRK07868 258 WIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT--CPVLAFVGEVDDIGQPASVRGIRRAAPN--------AE 327 (994)
T ss_pred ccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC--CCEEEEEeCCCCCCCHHHHHHHHHhCCC--------Ce
Confidence 1 0111112222222111 001 11345555 8999999999999999998888887766 77
Q ss_pred E-EEecCCCcccccc---ChHHHHHHHHHHHhc
Q 020518 296 V-HVLPNAGHWVHVD---NPKGLLEIVAPRIAS 324 (325)
Q Consensus 296 ~-~~~~~~gH~~~~e---~p~~~~~~i~~fl~~ 324 (325)
+ .+++++||+.++- .|+++...|.+||+.
T Consensus 328 ~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 328 VYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred EEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 7 6789999998873 678888999999864
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=133.12 Aligned_cols=145 Identities=25% Similarity=0.408 Sum_probs=110.1
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
+||++||++++...|..+...|++ .||.|+.+|+||+|.+.. ....+++.+++. ....+.+ ++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~-~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE--------QGYAVVAFDYPGHGDSDG------ADAVERVLADIR--AGYPDPD-RI 63 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH--------TTEEEEEESCTTSTTSHH------SHHHHHHHHHHH--HHHCTCC-EE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEEecCCCCccch------hHHHHHHHHHHH--hhcCCCC-cE
Confidence 589999999999999999999998 899999999999999833 222333333332 1123566 99
Q ss_pred EEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhh
Q 020518 126 VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMEL 205 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (325)
+++|||+||.+++.++.+. . +++++|++++.+..
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~--------~v~~~v~~~~~~~~------------------------------------- 97 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-P--------RVKAVVLLSPYPDS------------------------------------- 97 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-T--------TESEEEEESESSGC-------------------------------------
T ss_pred EEEEEccCcHHHHHHhhhc-c--------ceeEEEEecCccch-------------------------------------
Confidence 9999999999999999998 4 79999999983100
Q ss_pred ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhh
Q 020518 206 GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANR 285 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 285 (325)
..+... ++|+++++|++|..++++..+.+.+.++.
T Consensus 98 -------------------------------------------~~~~~~--~~pv~~i~g~~D~~~~~~~~~~~~~~~~~ 132 (145)
T PF12695_consen 98 -------------------------------------------EDLAKI--RIPVLFIHGENDPLVPPEQVRRLYEALPG 132 (145)
T ss_dssp -------------------------------------------HHHTTT--TSEEEEEEETT-SSSHHHHHHHHHHHHCS
T ss_pred -------------------------------------------hhhhcc--CCcEEEEEECCCCcCCHHHHHHHHHHcCC
Confidence 000111 15999999999999988888887776662
Q ss_pred cCCCCCCceeEEEecCCCcc
Q 020518 286 QGDGSEGKVSVHVLPNAGHW 305 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~gH~ 305 (325)
+.+++++++++|+
T Consensus 133 -------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 133 -------PKELYIIPGAGHF 145 (145)
T ss_dssp -------SEEEEEETTS-TT
T ss_pred -------CcEEEEeCCCcCc
Confidence 2899999999996
|
... |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.2e-18 Score=138.02 Aligned_cols=217 Identities=15% Similarity=0.147 Sum_probs=132.0
Q ss_pred ccCCccccccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCC--CCCCCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDL--RNHGRS 93 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~--~G~G~S 93 (325)
.+...-..+..+.|..+.++.. ..+.|+|+|+||++++...|... +..+++. .|+.|+++|. +|+|.+
T Consensus 16 ~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~-------~g~~Vv~Pd~~~~g~~~~ 88 (275)
T TIGR02821 16 YRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAE-------HGLALVAPDTSPRGTGIA 88 (275)
T ss_pred EEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhh-------cCcEEEEeCCCCCcCCCC
Confidence 3333334566777888876432 23478999999999999888543 3345432 5899999998 555543
Q ss_pred CCCC-----------------CCCCCCCHHH-HHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHccccccCCc
Q 020518 94 AEIE-----------------GLDPPHDIAN-AANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 94 ~~~~-----------------~~~~~~~~~~-~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
.... .....++..+ +++++..++++ ++.+ +++++||||||.+++.++.++|+
T Consensus 89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~G~S~GG~~a~~~a~~~p~------ 161 (275)
T TIGR02821 89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGE-RQGITGHSMGGHGALVIALKNPD------ 161 (275)
T ss_pred CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCC-ceEEEEEChhHHHHHHHHHhCcc------
Confidence 2110 0001233333 46788888877 3556 89999999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccCh
Q 020518 153 VALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNL 232 (325)
Q Consensus 153 ~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (325)
.+++++++++.......... .... ..++... .. .....+.
T Consensus 162 --~~~~~~~~~~~~~~~~~~~~---------------------~~~~------------~~~l~~~----~~-~~~~~~~ 201 (275)
T TIGR02821 162 --RFKSVSAFAPIVAPSRCPWG---------------------QKAF------------SAYLGAD----EA-AWRSYDA 201 (275)
T ss_pred --cceEEEEECCccCcccCcch---------------------HHHH------------HHHhccc----cc-chhhcch
Confidence 99999998876432110000 0000 0011000 00 0000000
Q ss_pred hHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCCh-HHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 233 DGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP-DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
...........|+++++|+.|..++. .....+.+.+...+. ++++.++||++|....
T Consensus 202 ---------------~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~----~v~~~~~~g~~H~f~~ 259 (275)
T TIGR02821 202 ---------------SLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ----ALTLRRQAGYDHSYYF 259 (275)
T ss_pred ---------------HHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC----CeEEEEeCCCCccchh
Confidence 00001111225888889999999887 455666666666554 3899999999998753
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=140.00 Aligned_cols=103 Identities=19% Similarity=0.165 Sum_probs=84.9
Q ss_pred CceEEEecCCCCCCC----ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---H
Q 020518 44 TSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL---V 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~---l 116 (325)
+++|||+||+++... .|..+++.|++ .||+|+++|+||||.|.... ...+++.+++|+..+ +
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~--------~Gy~Vl~~Dl~G~G~S~g~~---~~~~~~~~~~Dv~~ai~~L 93 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAA--------GGFGVLQIDLYGCGDSAGDF---AAARWDVWKEDVAAAYRWL 93 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHH--------CCCEEEEECCCCCCCCCCcc---ccCCHHHHHHHHHHHHHHH
Confidence 678999999987544 45556677776 89999999999999997654 345788888887665 4
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++.+.+ +++|+||||||.+++.+|.++|+ +++++|+++|..
T Consensus 94 ~~~~~~-~v~LvG~SmGG~vAl~~A~~~p~--------~v~~lVL~~P~~ 134 (266)
T TIGR03101 94 IEQGHP-PVTLWGLRLGALLALDAANPLAA--------KCNRLVLWQPVV 134 (266)
T ss_pred HhcCCC-CEEEEEECHHHHHHHHHHHhCcc--------ccceEEEecccc
Confidence 555667 99999999999999999999999 999999999763
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-18 Score=127.33 Aligned_cols=220 Identities=12% Similarity=0.088 Sum_probs=141.2
Q ss_pred CCceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 43 YTSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+...+|++||+-++... ...++..|.+ .|+.++.+|++|.|.|...-. .-.....|+|+..+++.+.
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~--------~gis~fRfDF~GnGeS~gsf~---~Gn~~~eadDL~sV~q~~s 100 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEK--------EGISAFRFDFSGNGESEGSFY---YGNYNTEADDLHSVIQYFS 100 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHh--------cCceEEEEEecCCCCcCCccc---cCcccchHHHHHHHHHHhc
Confidence 46789999999886643 2345666666 899999999999999987542 2344555699999999885
Q ss_pred CCCC--EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 121 WDWP--DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 121 ~~~~--~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
-..+ .+++|||-||.+++.+|.++++ ++-+|-+++-..... .+
T Consensus 101 ~~nr~v~vi~gHSkGg~Vvl~ya~K~~d---------~~~viNcsGRydl~~----------~I---------------- 145 (269)
T KOG4667|consen 101 NSNRVVPVILGHSKGGDVVLLYASKYHD---------IRNVINCSGRYDLKN----------GI---------------- 145 (269)
T ss_pred cCceEEEEEEeecCccHHHHHHHHhhcC---------chheEEcccccchhc----------ch----------------
Confidence 3312 4689999999999999999986 677776665422110 00
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
.....+...+|+.+.-........-.+........+...-..+..+...+|++.||||-++|..|.++|.+.+..
T Consensus 146 -----~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake 220 (269)
T KOG4667|consen 146 -----NERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE 220 (269)
T ss_pred -----hhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH
Confidence 000111122222222111111100000111111111222233455566678888999999999999999999999
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
+++.+++ .++.++||+.|.....+ ++.+.....|.
T Consensus 221 fAk~i~n--------H~L~iIEgADHnyt~~q-~~l~~lgl~f~ 255 (269)
T KOG4667|consen 221 FAKIIPN--------HKLEIIEGADHNYTGHQ-SQLVSLGLEFI 255 (269)
T ss_pred HHHhccC--------CceEEecCCCcCccchh-hhHhhhcceeE
Confidence 9888887 89999999999876543 44444444443
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=133.11 Aligned_cols=180 Identities=14% Similarity=0.181 Sum_probs=118.8
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC--------CCCCC---CHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG--------LDPPH---DIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~--------~~~~~---~~~~~~~ 110 (325)
+.++.|||+||++++...|..+.+.|.+. ++.+..++++|...+..... ..... .+.+..+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~--------~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~ 85 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPA--------FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMP 85 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHH--------CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHH
Confidence 45789999999999999999999999863 33344444445432211000 00111 1223333
Q ss_pred HHHHHH----HHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 111 DLANLV----KAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 111 ~l~~~l----~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
.+.+++ ++.+++ .+++++|||+||.+++.++.++|+ .+.+++.+++.....
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--------~~~~vv~~sg~~~~~---------------- 141 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--------LAGRVIAFSGRYASL---------------- 141 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--------cceEEEEeccccccc----------------
Confidence 333333 333432 279999999999999999999998 777777665421000
Q ss_pred hcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 186 QSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
+ . .. ..++|+++++|
T Consensus 142 -------~---------------~-----------------------------------------~~--~~~~pvli~hG 156 (232)
T PRK11460 142 -------P---------------E-----------------------------------------TA--PTATTIHLIHG 156 (232)
T ss_pred -------c---------------c-----------------------------------------cc--cCCCcEEEEec
Confidence 0 0 00 01269999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
++|++++.+..+.+.+.+...+. ++++++++++||.+..+.-+.+.+.|.++|
T Consensus 157 ~~D~vvp~~~~~~~~~~L~~~g~----~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 157 GEDPVIDVAHAVAAQEALISLGG----DVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCCCccCHHHHHHHHHHHHHCCC----CeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 99999999999888888876543 389999999999997665566666665555
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.4e-18 Score=129.45 Aligned_cols=192 Identities=14% Similarity=0.118 Sum_probs=132.4
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG-W 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~-~ 121 (325)
..++|++.||...+......+...|..+ -+++++++|++|+|.|...+. .....+.++.+.++|++-. .
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~-------ln~nv~~~DYSGyG~S~G~ps---E~n~y~Di~avye~Lr~~~g~ 128 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIF-------LNCNVVSYDYSGYGRSSGKPS---ERNLYADIKAVYEWLRNRYGS 128 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhc-------ccceEEEEecccccccCCCcc---cccchhhHHHHHHHHHhhcCC
Confidence 3589999999976666555555556543 378999999999999998774 3445555555555555544 2
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
+.+++|+|+|+|...++.+|++.| +.++||.+|..... +.+..
T Consensus 129 ~~~Iil~G~SiGt~~tv~Lasr~~----------~~alVL~SPf~S~~-------------rv~~~-------------- 171 (258)
T KOG1552|consen 129 PERIILYGQSIGTVPTVDLASRYP----------LAAVVLHSPFTSGM-------------RVAFP-------------- 171 (258)
T ss_pred CceEEEEEecCCchhhhhHhhcCC----------cceEEEeccchhhh-------------hhhcc--------------
Confidence 339999999999999999999975 68999998763221 00000
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 281 (325)
. .. ..+.++ .+ .....+..+ +||+|+++|.+|++++......+.+
T Consensus 172 ----------------~----~~-~~~~~d---------~f---~~i~kI~~i--~~PVLiiHgtdDevv~~sHg~~Lye 216 (258)
T KOG1552|consen 172 ----------------D----TK-TTYCFD---------AF---PNIEKISKI--TCPVLIIHGTDDEVVDFSHGKALYE 216 (258)
T ss_pred ----------------C----cc-eEEeec---------cc---cccCcceec--cCCEEEEecccCceecccccHHHHH
Confidence 0 00 000000 00 001223333 4899999999999999998888888
Q ss_pred HhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+. ..+..++.|+||.-. +...++.+.+.+|+..
T Consensus 217 ~~k~-------~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 217 RCKE-------KVEPLWVKGAGHNDI-ELYPEYIEHLRRFISS 251 (258)
T ss_pred hccc-------cCCCcEEecCCCccc-ccCHHHHHHHHHHHHH
Confidence 8775 258889999999765 5566788888888865
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-17 Score=126.09 Aligned_cols=261 Identities=14% Similarity=0.135 Sum_probs=159.7
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHHHH--HHHHhhhhccCCCCceEEEEeCCCCCCCCC--CCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRSFS--RNLASTLSQTSASSEWRMVLVDLRNHGRSA--EIEGLDPP 102 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~--~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~--~~~~~~~~ 102 (325)
..++...+|.... ++|++|-.|.++.+... |..+. +..++.. ..+.|+.+|.|||-.-. .+.+. ..
T Consensus 32 G~v~V~V~Gd~~~--~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~------~~fcv~HV~~PGqe~gAp~~p~~y-~y 102 (326)
T KOG2931|consen 32 GVVHVTVYGDPKG--NKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL------EHFCVYHVDAPGQEDGAPSFPEGY-PY 102 (326)
T ss_pred ccEEEEEecCCCC--CCceEEEecccccchHhHhHHhhcCHhHHHHH------hheEEEecCCCccccCCccCCCCC-CC
Confidence 5788888887533 68889999999998755 55432 2222222 45899999999995443 33321 35
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
.|+++++++|..++++++.+ .++-+|--.|+.|..++|..||+ +|.+||||++.+.... +......++.
T Consensus 103 Psmd~LAd~l~~VL~~f~lk-~vIg~GvGAGAyIL~rFAl~hp~--------rV~GLvLIn~~~~a~g--wiew~~~K~~ 171 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHFGLK-SVIGMGVGAGAYILARFALNHPE--------RVLGLVLINCDPCAKG--WIEWAYNKVS 171 (326)
T ss_pred CCHHHHHHHHHHHHHhcCcc-eEEEecccccHHHHHHHHhcChh--------heeEEEEEecCCCCch--HHHHHHHHHH
Confidence 59999999999999999999 99999999999999999999999 9999999998764422 2222222222
Q ss_pred HHh-hcCCCCCCcHHHHHHHHHhhccc---hhHHHHHhhcccCCCcccccccChhHHHHhhhccc-CCcccccccCC--C
Q 020518 183 QTL-QSLPSSIPSRKWLVNHMMELGFS---KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR-EMSYWPLLEHP--P 255 (325)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~ 255 (325)
..+ ............+....+..... ..+.+.....+. ...+......++..|. +.|+....... .
T Consensus 172 s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~-------~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~t 244 (326)
T KOG2931|consen 172 SNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLG-------ERLNPKNLALFLNAYNGRRDLSIERPKLGTT 244 (326)
T ss_pred HHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHH-------hcCChhHHHHHHHHhcCCCCccccCCCcCcc
Confidence 111 11111111111111111111111 111111111111 1112333333333332 22222222221 2
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.+||++++.|.+.+.+.. +..+...+.. .++.+..+.+||-.++.++|..+++.+.-|++
T Consensus 245 lkc~vllvvGd~Sp~~~~--vv~~n~~Ldp------~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 245 LKCPVLLVVGDNSPHVSA--VVECNSKLDP------TYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ccccEEEEecCCCchhhh--hhhhhcccCc------ccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 359999999999866543 2222222222 24899999999999999999999999999986
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.1e-18 Score=134.76 Aligned_cols=263 Identities=17% Similarity=0.199 Sum_probs=141.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|..+-.....+ +.+..+|.||++||+.+++.+ | +.+++.+.+ +||.|++++.|||+.+..... ..
T Consensus 57 pdg~~~~ldw~~~-p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~--------rg~~~Vv~~~Rgcs~~~n~~p--~~ 125 (345)
T COG0429 57 PDGGFIDLDWSED-PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSR--------RGWLVVVFHFRGCSGEANTSP--RL 125 (345)
T ss_pred CCCCEEEEeeccC-ccccCCceEEEEeccCCCCcCHHHHHHHHHHHh--------cCCeEEEEecccccCCcccCc--ce
Confidence 4555555554443 334567899999999776643 3 346666666 899999999999998876432 12
Q ss_pred CCHHHHHHHHHHHHH---HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC------CCCC
Q 020518 103 HDIANAANDLANLVK---AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV------KTEN 173 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~---~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~------~~~~ 173 (325)
|+ .-..+|+..+++ +....+++..+|.|+||.+...|..+..+ + ..+.+.+.++.+.... ....
T Consensus 126 yh-~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~-----d-~~~~aa~~vs~P~Dl~~~~~~l~~~~ 198 (345)
T COG0429 126 YH-SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGD-----D-LPLDAAVAVSAPFDLEACAYRLDSGF 198 (345)
T ss_pred ec-ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhcc-----C-cccceeeeeeCHHHHHHHHHHhcCch
Confidence 21 111244444443 33455599999999999655555555443 1 2455555554331110 0011
Q ss_pred chhHHHH-HHHHhhcCCCCCCcHHHHHHHHHh--hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 174 SEGEVEK-VLQTLQSLPSSIPSRKWLVNHMME--LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 174 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
+.....+ +.+.+.. .+...+.. ..........++................-.+.+....|++....+.
T Consensus 199 s~~ly~r~l~~~L~~---------~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~ 269 (345)
T COG0429 199 SLRLYSRYLLRNLKR---------NAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPL 269 (345)
T ss_pred hhhhhHHHHHHHHHH---------HHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccc
Confidence 1000000 0011000 00000000 0011111111111111111111112223344444555666666677
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc----ChH-HHHHHHHHHHh
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD----NPK-GLLEIVAPRIA 323 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e----~p~-~~~~~i~~fl~ 323 (325)
++.|. +|+|+|++.+|++++++.+.......+ |++.+.+-+.+||.-++. +|. ...+.|.+||+
T Consensus 270 L~~Ir--~PtLii~A~DDP~~~~~~iP~~~~~~n-------p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 270 LPKIR--KPTLIINAKDDPFMPPEVIPKLQEMLN-------PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred ccccc--cceEEEecCCCCCCChhhCCcchhcCC-------CceEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 77777 799999999999999977665555311 349999999999999987 443 45556666664
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-17 Score=129.61 Aligned_cols=261 Identities=13% Similarity=0.120 Sum_probs=139.7
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHHHH--HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-CCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRSFS--RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-PPH 103 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~--~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-~~~ 103 (325)
..++....|... .++|++|-.|-.|.+... |..+. +...+.. +.+.++-+|.||+..-...-..+ ...
T Consensus 9 G~v~V~v~G~~~--~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~------~~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 9 GSVHVTVQGDPK--GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL------QNFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEEEEESS----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH------TTSEEEEEE-TTTSTT-----TT----
T ss_pred eEEEEEEEecCC--CCCceEEEeccccccchHHHHHHhcchhHHHHh------hceEEEEEeCCCCCCCccccccccccc
Confidence 367777777742 269999999999987765 65542 2222222 78899999999997654433211 345
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
|++++++++..++++++++ .++.+|--.||.|..++|..+|+ +|.++||+++.+.... +.+....++..
T Consensus 81 smd~LAe~l~~Vl~~f~lk-~vIg~GvGAGAnIL~rfAl~~p~--------~V~GLiLvn~~~~~~g--w~Ew~~~K~~~ 149 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLK-SVIGFGVGAGANILARFALKHPE--------RVLGLILVNPTCTAAG--WMEWFYQKLSS 149 (283)
T ss_dssp -HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGG--------GEEEEEEES---S-----HHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCcc-EEEEEeeccchhhhhhccccCcc--------ceeEEEEEecCCCCcc--HHHHHHHHHhc
Confidence 9999999999999999999 99999999999999999999999 9999999998764422 11111111111
Q ss_pred H-hhcCCCCCCcHHHHHHHHHhhcc---chhHHHHHhhcccCCCcccccccChhHHHHhhhcc-cCCcccccccCCCCCC
Q 020518 184 T-LQSLPSSIPSRKWLVNHMMELGF---SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY-REMSYWPLLEHPPQGM 258 (325)
Q Consensus 184 ~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (325)
. +............+......... ...+.+.....+.. ..+......++..+ .+.++....+... |
T Consensus 150 ~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~-------~~Np~Nl~~f~~sy~~R~DL~~~~~~~~--c 220 (283)
T PF03096_consen 150 WLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDE-------RINPKNLALFLNSYNSRTDLSIERPSLG--C 220 (283)
T ss_dssp ------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT--------TTHHHHHHHHHHHHT-----SECTTCC--S
T ss_pred ccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhc-------CCCHHHHHHHHHHHhccccchhhcCCCC--C
Confidence 1 11111111111111111111100 11111111111111 11233444444443 2334444444443 9
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|+|.|+..+... .+..+...+.. .++++..+++||=.+..|+|+.+++.++=||+.
T Consensus 221 ~vLlvvG~~Sp~~~--~vv~~ns~Ldp------~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 221 PVLLVVGDNSPHVD--DVVEMNSKLDP------TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp -EEEEEETTSTTHH--HHHHHHHHS-C------CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcchh--hHHHHHhhcCc------ccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 99999999976543 23344444432 249999999999999999999999999999974
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.2e-17 Score=132.35 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=84.2
Q ss_pred ccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHH---HHHHHhhhhccCCCCceEEEEeCCCCCCC-----CCC--
Q 020518 27 LQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSF---SRNLASTLSQTSASSEWRMVLVDLRNHGR-----SAE-- 95 (325)
Q Consensus 27 ~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-----S~~-- 95 (325)
+..+.|..+-|+.. ....|+|+|+||++++...|... ...+.. .|+.|+.+|..++|. +..
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~--------~g~~Vv~pd~~~~g~~~~~~~~~~~ 100 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA--------RGIALVAPDTSPRGLNVEGEADSWD 100 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh--------cCeEEEecCCCCCCCCCCCCccccc
Confidence 56777777665422 23568999999999988777543 233343 799999999887661 110
Q ss_pred -C-------CCCC--------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceE
Q 020518 96 -I-------EGLD--------PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQL 159 (325)
Q Consensus 96 -~-------~~~~--------~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l 159 (325)
. .... ..+-.+++.+.+...++.++.+ +++++||||||..|+.++.++|+ +++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~--------~~~~~ 171 (283)
T PLN02442 101 FGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPD--------KYKSV 171 (283)
T ss_pred cCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCch--------hEEEE
Confidence 0 0000 0112334444455555556777 89999999999999999999999 99999
Q ss_pred EEEecCC
Q 020518 160 WVLDSVP 166 (325)
Q Consensus 160 vli~~~~ 166 (325)
+.+++..
T Consensus 172 ~~~~~~~ 178 (283)
T PLN02442 172 SAFAPIA 178 (283)
T ss_pred EEECCcc
Confidence 9988764
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=133.88 Aligned_cols=272 Identities=13% Similarity=0.128 Sum_probs=143.0
Q ss_pred ccccccceEEEEcccCCC-----CCCCceEEEecCCCCCCCC-hH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSD-----RPYTSTAFVLHGLLGSGRN-WR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~-----~~~~~~vv~~HG~~~~~~~-~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
.+.||..+.+....++.. ....|.||++||+.+++.. |- .++..+.+ +||+|+.++.||+|.|.-
T Consensus 99 ~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~--------~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 99 KTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQR--------KGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred EeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHh--------CCcEEEEECCCCCCCCcc
Confidence 446788888887644322 2467999999999776643 32 34444444 899999999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC-Cc
Q 020518 96 IEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE-NS 174 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~-~~ 174 (325)
...--..+...+..+.+.+.+++.-++.+...+|.||||.+.+.|..+..+ +...+.++.+++|.-...... ..
T Consensus 171 tTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~-----~~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 171 TTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGD-----NTPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred CCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccC-----CCCceeEEEEeccchhhhhhhHHh
Confidence 653112223333333344444444555589999999999999999998766 222445555555542110000 00
Q ss_pred hhHHHHHHHHhhcC--CC-CCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 175 EGEVEKVLQTLQSL--PS-SIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 175 ~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
..........+... .. ....+..+.+.... .+.+.+...............-.+......|+.......+
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd-------~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v 318 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVD-------FDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYV 318 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccch-------hhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhc
Confidence 00000000000000 00 00000000000000 0000000000000000111112222333445555666677
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC----hHHHHHH-HHHHHh
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN----PKGLLEI-VAPRIA 323 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~-i~~fl~ 323 (325)
+.++ +|+++|.+.+|+++++.....- ....+ |++-+++-..+||..++|. +....+. +.+|+.
T Consensus 319 ~~I~--VP~L~ina~DDPv~p~~~ip~~-~~~~n------p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 319 DKIK--VPLLCINAADDPVVPEEAIPID-DIKSN------PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cccc--ccEEEEecCCCCCCCcccCCHH-HHhcC------CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 7776 8999999999999988644222 12222 2478888888899999986 2333333 666654
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.8e-18 Score=124.20 Aligned_cols=217 Identities=16% Similarity=0.180 Sum_probs=143.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
+|..+++-...-+ ..+.|+++.+||..++.....+.+.-+-.. -+.+|+.+++||+|.|...+. ...
T Consensus 62 ~D~vtL~a~~~~~---E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~-------l~mnv~ivsYRGYG~S~Gsps---E~G 128 (300)
T KOG4391|consen 62 RDKVTLDAYLMLS---ESSRPTLLYFHANAGNMGHRLPIARVFYVN-------LKMNVLIVSYRGYGKSEGSPS---EEG 128 (300)
T ss_pred CcceeEeeeeecc---cCCCceEEEEccCCCcccchhhHHHHHHHH-------cCceEEEEEeeccccCCCCcc---ccc
Confidence 3455555444332 247899999999999999988888877765 478999999999999998763 333
Q ss_pred HHHHHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 105 IANAANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 105 ~~~~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
+.-.++.+.+.+-. ++.. ++++.|-|+||++|..+|+++.+ ++.++|+-++...... ..
T Consensus 129 L~lDs~avldyl~t~~~~dkt-kivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF~SIp~---------~~ 190 (300)
T KOG4391|consen 129 LKLDSEAVLDYLMTRPDLDKT-KIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTFLSIPH---------MA 190 (300)
T ss_pred eeccHHHHHHHHhcCccCCcc-eEEEEecccCCeeEEEeeccchh--------heeeeeeechhccchh---------hh
Confidence 33333333333321 1334 89999999999999999999998 9999999887643210 00
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
...+...+ .+-+..|..+ ..+.++ ..+. ...+|.|
T Consensus 191 i~~v~p~~------------------~k~i~~lc~k-------------------n~~~S~------~ki~--~~~~P~L 225 (300)
T KOG4391|consen 191 IPLVFPFP------------------MKYIPLLCYK-------------------NKWLSY------RKIG--QCRMPFL 225 (300)
T ss_pred hheeccch------------------hhHHHHHHHH-------------------hhhcch------hhhc--cccCceE
Confidence 00000000 0000011110 001111 1111 2348999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|.|.+|..+||...+.+.++.+... .++..+|++.|.-.+- -+-..++|.+||..
T Consensus 226 FiSGlkDelVPP~~Mr~Ly~~c~S~~------Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 226 FISGLKDELVPPVMMRQLYELCPSRT------KRLAEFPDGTHNDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred EeecCccccCCcHHHHHHHHhCchhh------hhheeCCCCccCceEE-eccHHHHHHHHHHH
Confidence 99999999999999888888887633 6899999999976554 26677888888864
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-16 Score=128.18 Aligned_cols=122 Identities=22% Similarity=0.178 Sum_probs=83.3
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.+.+..+.+. .....|+|||+||++.+...|..+++.|++ .||.|+++|++|++.+.... ...+..+.
T Consensus 38 ~~p~~v~~P~-~~g~~PvVv~lHG~~~~~~~y~~l~~~Las--------~G~~VvapD~~g~~~~~~~~---~i~d~~~~ 105 (313)
T PLN00021 38 PKPLLVATPS-EAGTYPVLLFLHGYLLYNSFYSQLLQHIAS--------HGFIVVAPQLYTLAGPDGTD---EIKDAAAV 105 (313)
T ss_pred CceEEEEeCC-CCCCCCEEEEECCCCCCcccHHHHHHHHHh--------CCCEEEEecCCCcCCCCchh---hHHHHHHH
Confidence 3444444442 224578999999999999999999999987 79999999999975332111 11122223
Q ss_pred HHHHHHHHHH-------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 109 ANDLANLVKA-------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 109 ~~~l~~~l~~-------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+.+.+.++. .+.+ +++++||||||.+++.+|.++++... ..+++++|++++..
T Consensus 106 ~~~l~~~l~~~l~~~~~~d~~-~v~l~GHS~GG~iA~~lA~~~~~~~~---~~~v~ali~ldPv~ 166 (313)
T PLN00021 106 INWLSSGLAAVLPEGVRPDLS-KLALAGHSRGGKTAFALALGKAAVSL---PLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHhhhhhhcccccccChh-heEEEEECcchHHHHHHHhhcccccc---ccceeeEEeecccc
Confidence 3333332222 2345 89999999999999999999885111 12689999998864
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=127.41 Aligned_cols=105 Identities=25% Similarity=0.391 Sum_probs=88.3
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCc-eEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSE-WRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
++|+|+|+.+++...|..+++.|. .. +.|++++.+|.+.... ...+++++++.+.+.|.....++
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~---------~~~~~v~~i~~~~~~~~~~-----~~~si~~la~~y~~~I~~~~~~g 66 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALP---------DDVIGVYGIEYPGRGDDEP-----PPDSIEELASRYAEAIRARQPEG 66 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHT---------TTEEEEEEECSTTSCTTSH-----EESSHHHHHHHHHHHHHHHTSSS
T ss_pred CeEEEEcCCccCHHHHHHHHHhCC---------CCeEEEEEEecCCCCCCCC-----CCCCHHHHHHHHHHHhhhhCCCC
Confidence 479999999999999999999998 54 8999999999994333 46799999999999998887776
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
+++|+|||+||.+|+++|.+--+. ...|..++++|+.++.
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~-----G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEA-----GEEVSRLILIDSPPPS 106 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHT-----T-SESEEEEESCSSTT
T ss_pred CeeehccCccHHHHHHHHHHHHHh-----hhccCceEEecCCCCC
Confidence 999999999999999999875441 1269999999976543
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-17 Score=136.96 Aligned_cols=109 Identities=20% Similarity=0.233 Sum_probs=84.0
Q ss_pred CCCCceEEEecCCCCCC--CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG--RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
++++|++|++|||+++. ..|.. +...|.... .+|+||++|++|+|.|..+.. ......+++++.++++
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~------~d~nVI~VDw~g~g~s~y~~a---~~~t~~vg~~la~lI~ 108 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYERE------PSANVIVVDWLSRAQQHYPTS---AAYTKLVGKDVAKFVN 108 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhcc------CCCEEEEEECCCcCCCCCccc---cccHHHHHHHHHHHHH
Confidence 34689999999998754 34654 444443211 369999999999998876542 2334677777777777
Q ss_pred Hh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 118 AK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 118 ~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+ +++ +++||||||||.+|..++.++|+ +|.++++++|+.+
T Consensus 109 ~L~~~~gl~l~-~VhLIGHSLGAhIAg~ag~~~p~--------rV~rItgLDPAgP 155 (442)
T TIGR03230 109 WMQEEFNYPWD-NVHLLGYSLGAHVAGIAGSLTKH--------KVNRITGLDPAGP 155 (442)
T ss_pred HHHHhhCCCCC-cEEEEEECHHHHHHHHHHHhCCc--------ceeEEEEEcCCCC
Confidence 54 367 99999999999999999999998 9999999999754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=9e-16 Score=138.84 Aligned_cols=230 Identities=16% Similarity=0.126 Sum_probs=143.3
Q ss_pred ccccceEEEEcccCCCCCCC--ceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC---C--CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYT--STAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR---S--AE 95 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~--~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~---S--~~ 95 (325)
.+|.++....+.+.+.++.+ |.||++||.+..... |......|+. +||.|+.+++||.+. . ..
T Consensus 373 ~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~--------~G~~V~~~n~RGS~GyG~~F~~~ 444 (620)
T COG1506 373 NDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS--------AGYAVLAPNYRGSTGYGREFADA 444 (620)
T ss_pred CCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc--------CCeEEEEeCCCCCCccHHHHHHh
Confidence 46889999888876554443 889999999876554 5566777776 999999999997543 2 11
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
..........+++.+.+. ++.+.+ .+ ++.+.|||+||.+++..+...|. +++.+...+.....
T Consensus 445 ~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~-ri~i~G~SyGGymtl~~~~~~~~---------f~a~~~~~~~~~~~--- 510 (620)
T COG1506 445 IRGDWGGVDLEDLIAAVD-ALVKLPLVDPE-RIGITGGSYGGYMTLLAATKTPR---------FKAAVAVAGGVDWL--- 510 (620)
T ss_pred hhhccCCccHHHHHHHHH-HHHhCCCcChH-HeEEeccChHHHHHHHHHhcCch---------hheEEeccCcchhh---
Confidence 111013446777777777 665554 34 89999999999999999998874 66665555432110
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
....... ..+.....+...... . +... +..........
T Consensus 511 ----------~~~~~~~---------------~~~~~~~~~~~~~~~--------~--~~~~-------~~~~sp~~~~~ 548 (620)
T COG1506 511 ----------LYFGEST---------------EGLRFDPEENGGGPP--------E--DREK-------YEDRSPIFYAD 548 (620)
T ss_pred ----------hhccccc---------------hhhcCCHHHhCCCcc--------c--ChHH-------HHhcChhhhhc
Confidence 0000000 000000000000000 0 0000 11111112233
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
+++ +|+|+|||..|+.++.+.+..+.+.+...+. +++++++|+.||.+-- ++-..+.+.+.+|+++
T Consensus 549 ~i~--~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~----~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 549 NIK--TPLLLIHGEEDDRVPIEQAEQLVDALKRKGK----PVELVVFPDEGHGFSRPENRVKVLKEILDWFKR 615 (620)
T ss_pred ccC--CCEEEEeecCCccCChHHHHHHHHHHHHcCc----eEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH
Confidence 444 8999999999999999999888888877554 4999999999999876 4455566666677653
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-16 Score=122.92 Aligned_cols=198 Identities=17% Similarity=0.137 Sum_probs=115.4
Q ss_pred hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeCh
Q 020518 60 WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPHDIANAANDLANLVKAK------GWDWPDVVIGHSM 132 (325)
Q Consensus 60 ~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~ 132 (325)
|......|++ +||.|+.+|+||.+........ .....-...++|+.+.++.+ +.+ ++.++|||+
T Consensus 3 f~~~~~~la~--------~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~-ri~i~G~S~ 73 (213)
T PF00326_consen 3 FNWNAQLLAS--------QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPD-RIGIMGHSY 73 (213)
T ss_dssp -SHHHHHHHT--------TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEE-EEEEEEETH
T ss_pred eeHHHHHHHh--------CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccce-eEEEEcccc
Confidence 3455566766 8999999999998743211000 01112233444444444433 345 899999999
Q ss_pred hHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHH
Q 020518 133 GGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLS 212 (325)
Q Consensus 133 Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (325)
||.+++.++.++|+ ++++++..++.............+.. ...........
T Consensus 74 GG~~a~~~~~~~~~--------~f~a~v~~~g~~d~~~~~~~~~~~~~-------------------~~~~~~~~~~~-- 124 (213)
T PF00326_consen 74 GGYLALLAATQHPD--------RFKAAVAGAGVSDLFSYYGTTDIYTK-------------------AEYLEYGDPWD-- 124 (213)
T ss_dssp HHHHHHHHHHHTCC--------GSSEEEEESE-SSTTCSBHHTCCHHH-------------------GHHHHHSSTTT--
T ss_pred cccccchhhcccce--------eeeeeeccceecchhccccccccccc-------------------ccccccCccch--
Confidence 99999999999999 99999998886543321100000000 00000000000
Q ss_pred HHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCC
Q 020518 213 EWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEG 292 (325)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 292 (325)
....+.... .+ ..+..+..++|+|+++|++|..+++.....+.+.+...+.
T Consensus 125 ------------------~~~~~~~~s-~~------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~---- 175 (213)
T PF00326_consen 125 ------------------NPEFYRELS-PI------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK---- 175 (213)
T ss_dssp ------------------SHHHHHHHH-HG------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS----
T ss_pred ------------------hhhhhhhhc-cc------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC----
Confidence 000000000 00 0111100237999999999999999998888888887655
Q ss_pred ceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 293 KVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 293 ~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
+++++++|++||.+. .+...+..+.+.+||+.
T Consensus 176 ~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 176 PVELLIFPGEGHGFGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp SEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHH
Confidence 399999999999554 34556788888888864
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-15 Score=117.81 Aligned_cols=183 Identities=16% Similarity=0.117 Sum_probs=110.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC------CCC---CCCCC---CCCC---CCCHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN------HGR---SAEIE---GLDP---PHDIA 106 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G------~G~---S~~~~---~~~~---~~~~~ 106 (325)
+..+.|||+||+|++...|..... +.... .+.++++++-|- .|. +-.+. .... ...+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~-~~~~~------~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAE-LNLAL------PNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHH-HHTCS------TTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHh-hcccC------CceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 568899999999998855554433 11112 677888776542 122 11110 0001 12244
Q ss_pred HHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 107 NAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 107 ~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
+.++.+.++++.. ..+ ++++.|+|.||++|+.++.++|+ .+.++|.+++.......
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~-ri~l~GFSQGa~~al~~~l~~p~--------~~~gvv~lsG~~~~~~~---------- 145 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPS-RIFLGGFSQGAAMALYLALRYPE--------PLAGVVALSGYLPPESE---------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GG-GEEEEEETHHHHHHHHHHHCTSS--------TSSEEEEES---TTGCC----------
T ss_pred HHHHHHHHHHHHHHHcCCChh-heehhhhhhHHHHHHHHHHHcCc--------CcCEEEEeecccccccc----------
Confidence 4455566666543 334 89999999999999999999999 99999999976322100
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
......... ++|++
T Consensus 146 -----------------------------------------------------------------~~~~~~~~~-~~pi~ 159 (216)
T PF02230_consen 146 -----------------------------------------------------------------LEDRPEALA-KTPIL 159 (216)
T ss_dssp -----------------------------------------------------------------CHCCHCCCC-TS-EE
T ss_pred -----------------------------------------------------------------ccccccccC-CCcEE
Confidence 000001111 37999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|.+|+++|.+..+...+.+..... ++++..+++.||.+. .+..+.+.+||+.
T Consensus 160 ~~hG~~D~vvp~~~~~~~~~~L~~~~~----~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 160 IIHGDEDPVVPFEWAEKTAEFLKAAGA----NVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp EEEETT-SSSTHHHHHHHHHHHHCTT-----GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred EEecCCCCcccHHHHHHHHHHHHhcCC----CEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 999999999999989888888887665 499999999999885 4556667777754
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.3e-16 Score=126.21 Aligned_cols=107 Identities=21% Similarity=0.293 Sum_probs=80.0
Q ss_pred CCceEEEecCCCCCC-CChHHH-HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 43 YTSTAFVLHGLLGSG-RNWRSF-SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~-~~~~~~-~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
++|++|++|||+++. ..|... ...+... .+|+|+++|+++++.+..+. ...+...+++++..+++.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~-------~~~nVi~vD~~~~~~~~y~~---a~~~~~~v~~~la~~l~~L~ 104 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSR-------GDYNVIVVDWGRGANPNYPQ---AVNNTRVVGAELAKFLDFLV 104 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhc-------CCCEEEEEECccccccChHH---HHHhHHHHHHHHHHHHHHHH
Confidence 488999999999987 677654 4444431 57999999999984332221 2345555666666666554
Q ss_pred -----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 120 -----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 120 -----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
+.+ ++++|||||||.+|..++.++|+ +|.++++++|+...
T Consensus 105 ~~~g~~~~-~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa~p~ 149 (275)
T cd00707 105 DNTGLSLE-NVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPAGPL 149 (275)
T ss_pred HhcCCChH-HEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCCccc
Confidence 346 89999999999999999999998 99999999987543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.1e-14 Score=112.10 Aligned_cols=109 Identities=11% Similarity=0.059 Sum_probs=72.8
Q ss_pred CCCceEEEecCCCCCCCChH---HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-------CCCCCHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWR---SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-------DPPHDIANAAND 111 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~ 111 (325)
...|.||++||.+++...|. .+...+.+ .||.|+++|.+|++.+...... .......++.+.
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~--------~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADR--------YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQL 82 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHh--------CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHH
Confidence 35789999999998876664 23333333 7999999999998754321100 001112222222
Q ss_pred HHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 112 LANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 112 l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+..+.++.+++ .+++|+|||+||.+++.++.++|+ ++.+++.+++.+
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--------~~~~~~~~~g~~ 130 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--------VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch--------hheEEEeecCCc
Confidence 23333333332 289999999999999999999999 999998888764
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-13 Score=119.62 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=92.9
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCCh-----HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-----RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+..+.|.+..+...++|||+++.+-.....| ..+++.|.+ +||.|+.+|+++-+.+. ...
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~--------qG~~VflIsW~nP~~~~------r~~ 265 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLK--------NQLQVFIISWRNPDKAH------REW 265 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHH--------cCCeEEEEeCCCCChhh------cCC
Confidence 34445555543445678999999998766666 478999988 99999999999866553 367
Q ss_pred CHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHH----HHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 104 DIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALH----FAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~----~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
+++++++.+.+.++.. |.+ +++++|||+||.+++. +++++++ .+|++++++.+.....
T Consensus 266 ~ldDYv~~i~~Ald~V~~~tG~~-~vnl~GyC~GGtl~a~~~a~~aA~~~~-------~~V~sltllatplDf~ 331 (560)
T TIGR01839 266 GLSTYVDALKEAVDAVRAITGSR-DLNLLGACAGGLTCAALVGHLQALGQL-------RKVNSLTYLVSLLDST 331 (560)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCC-CeeEEEECcchHHHHHHHHHHHhcCCC-------CceeeEEeeecccccC
Confidence 8899988877777665 556 9999999999999997 7888874 2799999999876543
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.1e-14 Score=114.24 Aligned_cols=125 Identities=17% Similarity=0.214 Sum_probs=103.6
Q ss_pred ccccceEEEEcccCCCC--CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCC--ceEEEEeCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASS--EWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
..|-++||....++... ..-.||+++|||+++-..|..+++.|...-.. +... -|.||++.+||+|-|+.+..
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~h-g~~~d~~FEVI~PSlPGygwSd~~sk-- 207 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRH-GNESDYAFEVIAPSLPGYGWSDAPSK-- 207 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCcccc-CCccceeEEEeccCCCCcccCcCCcc--
Confidence 36889999988765332 23357999999999999999999999863210 1001 27899999999999999886
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEE
Q 020518 101 PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvl 161 (325)
......+.|.-++.++-.+|.+ ++.+-|-.||+.|+..+|..+|+ .|.++=+
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg~n-kffiqGgDwGSiI~snlasLyPe--------nV~GlHl 259 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLGYN-KFFIQGGDWGSIIGSNLASLYPE--------NVLGLHL 259 (469)
T ss_pred CCccHHHHHHHHHHHHHHhCcc-eeEeecCchHHHHHHHHHhhcch--------hhhHhhh
Confidence 7889999999999999999999 99999999999999999999999 7776544
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.2e-13 Score=99.72 Aligned_cols=179 Identities=17% Similarity=0.182 Sum_probs=119.8
Q ss_pred CCCCceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 41 RPYTSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
.+..|..|.+|--+....+ ..+++..++..+.+ .||.++.+|+||-|.|....+ ....-.+.+....++++..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~----~G~atlRfNfRgVG~S~G~fD--~GiGE~~Da~aaldW~~~~ 98 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVK----RGFATLRFNFRGVGRSQGEFD--NGIGELEDAAAALDWLQAR 98 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHh----CCceEEeecccccccccCccc--CCcchHHHHHHHHHHHHhh
Confidence 4567888999876543322 23344444333333 899999999999999998764 3444455566667777776
Q ss_pred CCCCCE-EEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 120 GWDWPD-VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 120 ~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
..+.+. .+.|+|+|+.|++.+|.+.|+ ....+.+.+.....
T Consensus 99 hp~s~~~~l~GfSFGa~Ia~~la~r~~e---------~~~~is~~p~~~~~----------------------------- 140 (210)
T COG2945 99 HPDSASCWLAGFSFGAYIAMQLAMRRPE---------ILVFISILPPINAY----------------------------- 140 (210)
T ss_pred CCCchhhhhcccchHHHHHHHHHHhccc---------ccceeeccCCCCch-----------------------------
Confidence 655233 588999999999999999887 33333333322100
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
++ ..+. +.++|.++|+|+.|+++++...-.
T Consensus 141 -----------------------------------------------df-s~l~--P~P~~~lvi~g~~Ddvv~l~~~l~ 170 (210)
T COG2945 141 -----------------------------------------------DF-SFLA--PCPSPGLVIQGDADDVVDLVAVLK 170 (210)
T ss_pred -----------------------------------------------hh-hhcc--CCCCCceeEecChhhhhcHHHHHH
Confidence 00 0001 223688999999999988865544
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+++- .+ .+++++++++||++- +-+.+.+.|.+||.
T Consensus 171 ~~~~---~~------~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 171 WQES---IK------ITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred hhcC---CC------CceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 4433 11 789999999999875 46788999999983
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-13 Score=123.46 Aligned_cols=123 Identities=15% Similarity=0.015 Sum_probs=92.7
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCC---ChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR---NWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~---~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+.+|.+|++..+.+.. ....|+||++||++.+.. .+. .....|.+ +||.|+++|+||+|.|.....
T Consensus 3 ~~DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~--------~Gy~vv~~D~RG~g~S~g~~~- 72 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA--------QGYAVVIQDTRGRGASEGEFD- 72 (550)
T ss_pred CCCCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhccccccccHHHHHh--------CCcEEEEEeccccccCCCceE-
Confidence 4688899988776642 235789999999987653 222 23455665 899999999999999987542
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC----CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 100 DPPHDIANAANDLANLVKAKGW----DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.++ ...++|+.++++.+.. +.++.++|||+||.+++.+|.++|+ +++++|..++...
T Consensus 73 --~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--------~l~aiv~~~~~~d 133 (550)
T TIGR00976 73 --LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--------ALRAIAPQEGVWD 133 (550)
T ss_pred --ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--------ceeEEeecCcccc
Confidence 222 4566777777665521 2389999999999999999999998 8999999887643
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.4e-13 Score=109.99 Aligned_cols=234 Identities=15% Similarity=0.005 Sum_probs=129.3
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+..+.+.+.. ...|.||++||.+ ++...|..++..|+.. .|+.|+++|+|....... ...+
T Consensus 68 ~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~-------~g~~Vv~vdYrlape~~~------p~~~ 132 (318)
T PRK10162 68 QVETRLYYPQP--DSQATLFYLHGGGFILGNLDTHDRIMRLLASY-------SGCTVIGIDYTLSPEARF------PQAI 132 (318)
T ss_pred ceEEEEECCCC--CCCCEEEEEeCCcccCCCchhhhHHHHHHHHH-------cCCEEEEecCCCCCCCCC------CCcH
Confidence 35555555532 3468899999976 4556788888888863 489999999996543322 2233
Q ss_pred HHH---HHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 106 ANA---ANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 106 ~~~---~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
++. .+.+.+..++++++ .+++|+|+|+||.+++.++.+..+... ...++.+++++.+....... . .
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~--~~~~~~~~vl~~p~~~~~~~---~---s-- 202 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQI--DCGKVAGVLLWYGLYGLRDS---V---S-- 202 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCC--CccChhheEEECCccCCCCC---h---h--
Confidence 443 33344444456542 289999999999999999986532100 01278999999876432110 0 0
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc-cCCCCCCcE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL-EHPPQGMEI 260 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~ 260 (325)
...... ....... ...+++...+...... ..++ +.. .....+ ..+ -|+
T Consensus 203 ~~~~~~-~~~~l~~--------------~~~~~~~~~y~~~~~~---~~~p---------~~~-p~~~~l~~~l---Pp~ 251 (318)
T PRK10162 203 RRLLGG-VWDGLTQ--------------QDLQMYEEAYLSNDAD---RESP---------YYC-LFNNDLTRDV---PPC 251 (318)
T ss_pred HHHhCC-CccccCH--------------HHHHHHHHHhCCCccc---cCCc---------ccC-cchhhhhcCC---CCe
Confidence 000000 0000000 0011111111100000 0000 000 000112 122 388
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-----ChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-----NPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl~~ 324 (325)
++++|+.|...+ ....+.+.+...+. ++++++++|..|.+..- ...+..+.+.+||+.
T Consensus 252 ~i~~g~~D~L~d--e~~~~~~~L~~aGv----~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 252 FIAGAEFDPLLD--DSRLLYQTLAAHQQ----PCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTA 314 (318)
T ss_pred EEEecCCCcCcC--hHHHHHHHHHHcCC----CEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHH
Confidence 999999998764 35566666666554 39999999999976532 234566677777753
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.1e-14 Score=104.24 Aligned_cols=156 Identities=16% Similarity=0.292 Sum_probs=98.1
Q ss_pred EEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 47 AFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 47 vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
|+++||++++. .+|.+....-.+ ..++|-.+++ ...+.+++...+.+.+.... + ++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~--------~~~~V~~~~~-------------~~P~~~~W~~~l~~~i~~~~-~-~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE--------NSVRVEQPDW-------------DNPDLDEWVQALDQAIDAID-E-PT 57 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT--------TSEEEEEC---------------TS--HHHHHHHHHHCCHC-T-T-TE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC--------CCeEEecccc-------------CCCCHHHHHHHHHHHHhhcC-C-Ce
Confidence 68999998875 677765433332 3367777666 13367888888888887653 4 79
Q ss_pred EEEEeChhHHHHHHHH-HHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHh
Q 020518 126 VVIGHSMGGKVALHFA-QSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMME 204 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a-~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (325)
++||||+|+..++.++ ..... +|.+++|++++.......
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~--------~v~g~lLVAp~~~~~~~~-------------------------------- 97 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQK--------KVAGALLVAPFDPDDPEP-------------------------------- 97 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCS--------SEEEEEEES--SCGCHHC--------------------------------
T ss_pred EEEEeCHHHHHHHHHHhhcccc--------cccEEEEEcCCCcccccc--------------------------------
Confidence 9999999999999999 55555 999999999873210000
Q ss_pred hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhh
Q 020518 205 LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN 284 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 284 (325)
... .+..+. .+...+..+|.++|.+++|++++.+..+.+++.+.
T Consensus 98 --~~~----------------------------~~~~f~------~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~ 141 (171)
T PF06821_consen 98 --FPP----------------------------ELDGFT------PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG 141 (171)
T ss_dssp --CTC----------------------------GGCCCT------TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT
T ss_pred --hhh----------------------------hccccc------cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC
Confidence 000 000000 00111112567999999999999998888888775
Q ss_pred hcCCCCCCceeEEEecCCCccccccC
Q 020518 285 RQGDGSEGKVSVHVLPNAGHWVHVDN 310 (325)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~gH~~~~e~ 310 (325)
++++.++++||+.-.+-
T Consensus 142 ---------a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 142 ---------AELIILGGGGHFNAASG 158 (171)
T ss_dssp ----------EEEEETS-TTSSGGGT
T ss_pred ---------CCeEECCCCCCcccccC
Confidence 79999999999987653
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.1e-14 Score=110.39 Aligned_cols=182 Identities=19% Similarity=0.163 Sum_probs=114.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC-CCCCCCCCCCC--------CHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR-SAEIEGLDPPH--------DIANAANDL 112 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-S~~~~~~~~~~--------~~~~~~~~l 112 (325)
.+.|.||++|++.+-....+.+++.|++ .||.|+++|+.+-.. ...... .... ..+...+++
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~--------~Gy~v~~pD~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAE--------EGYVVLAPDLFGGRGAPPSDPE-EAFAAMRELFAPRPEQVAADL 82 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHH--------TT-EEEEE-CCCCTS--CCCHH-CHHHHHHHCHHHSHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHh--------cCCCEEecccccCCCCCccchh-hHHHHHHHHHhhhHHHHHHHH
Confidence 3579999999998877666678888887 899999999864443 111100 0000 134556677
Q ss_pred HHHHHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 113 ANLVKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 113 ~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
.+.++.+. .+ ++.++|+||||.+++.++.+. + .+++.|..-+.....
T Consensus 83 ~aa~~~l~~~~~~~~~-kig~vGfc~GG~~a~~~a~~~-~--------~~~a~v~~yg~~~~~----------------- 135 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPG-KIGVVGFCWGGKLALLLAARD-P--------RVDAAVSFYGGSPPP----------------- 135 (218)
T ss_dssp HHHHHHHHCTTTCEEE-EEEEEEETHHHHHHHHHHCCT-T--------TSSEEEEES-SSSGG-----------------
T ss_pred HHHHHHHHhccccCCC-cEEEEEEecchHHhhhhhhhc-c--------ccceEEEEcCCCCCC-----------------
Confidence 66666552 23 899999999999999999887 4 688888776610000
Q ss_pred cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 187 SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
........+ ++|+++++|+
T Consensus 136 -----------------------------------------------------------~~~~~~~~~--~~P~l~~~g~ 154 (218)
T PF01738_consen 136 -----------------------------------------------------------PPLEDAPKI--KAPVLILFGE 154 (218)
T ss_dssp -----------------------------------------------------------GHHHHGGG----S-EEEEEET
T ss_pred -----------------------------------------------------------cchhhhccc--CCCEeecCcc
Confidence 000001222 2799999999
Q ss_pred CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh--------HHHHHHHHHHHhc
Q 020518 267 KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP--------KGLLEIVAPRIAS 324 (325)
Q Consensus 267 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~fl~~ 324 (325)
+|+.++++..+.+.+.+...+. .+++++++|++|-+..... ++-.+.+.+||++
T Consensus 155 ~D~~~~~~~~~~~~~~l~~~~~----~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 155 NDPFFPPEEVEALEEALKAAGV----DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp T-TTS-HHHHHHHHHHHHCTTT----TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CCCCCChHHHHHHHHHHHhcCC----cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999887777777755443 3999999999998876432 3445566677654
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=104.23 Aligned_cols=175 Identities=19% Similarity=0.186 Sum_probs=120.2
Q ss_pred CCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC--CC----CCCCCCCCCCCCCH-------HH
Q 020518 41 RPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN--HG----RSAEIEGLDPPHDI-------AN 107 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G--~G----~S~~~~~~~~~~~~-------~~ 107 (325)
.+..|.||++||+|++...+-+....+. .++.++.+.-+= .| .+.... ..++. +.
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~---------P~~~~is~rG~v~~~g~~~~f~~~~~---~~~d~edl~~~~~~ 82 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELIL---------PNATLVSPRGPVAENGGPRFFRRYDE---GSFDQEDLDLETEK 82 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcC---------CCCeEEcCCCCccccCcccceeecCC---CccchhhHHHHHHH
Confidence 3567789999999998888877544444 566776653210 01 000100 22333 33
Q ss_pred HHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 108 AANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 108 ~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++.+....++.++ + +++++|+|-||++++.+..++|+ .++++|++.+.......
T Consensus 83 ~~~~l~~~~~~~gi~~~-~ii~~GfSqGA~ial~~~l~~~~--------~~~~ail~~g~~~~~~~-------------- 139 (207)
T COG0400 83 LAEFLEELAEEYGIDSS-RIILIGFSQGANIALSLGLTLPG--------LFAGAILFSGMLPLEPE-------------- 139 (207)
T ss_pred HHHHHHHHHHHhCCChh-heEEEecChHHHHHHHHHHhCch--------hhccchhcCCcCCCCCc--------------
Confidence 44445555556666 6 89999999999999999999999 99999999876432210
Q ss_pred hcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 186 QSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
.... ...+|+++++|
T Consensus 140 ----------------------------------------------------------------~~~~-~~~~pill~hG 154 (207)
T COG0400 140 ----------------------------------------------------------------LLPD-LAGTPILLSHG 154 (207)
T ss_pred ----------------------------------------------------------------cccc-cCCCeEEEecc
Confidence 0001 12269999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..|++++.....++.+.+...+.. +++..++ .||.+.. +..+.+.+|+..
T Consensus 155 ~~Dpvvp~~~~~~l~~~l~~~g~~----v~~~~~~-~GH~i~~----e~~~~~~~wl~~ 204 (207)
T COG0400 155 TEDPVVPLALAEALAEYLTASGAD----VEVRWHE-GGHEIPP----EELEAARSWLAN 204 (207)
T ss_pred CcCCccCHHHHHHHHHHHHHcCCC----EEEEEec-CCCcCCH----HHHHHHHHHHHh
Confidence 999999999999999988886654 8999999 6998854 444555556643
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-14 Score=93.48 Aligned_cols=79 Identities=19% Similarity=0.333 Sum_probs=69.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
|.+|+|+.+.++.+ .+.+|+++||++..+..|..++..|++ .||.|+++|+||||.|..... ...+++
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~ry~~~a~~L~~--------~G~~V~~~D~rGhG~S~g~rg--~~~~~~ 68 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGRYAHLAEFLAE--------QGYAVFAYDHRGHGRSEGKRG--HIDSFD 68 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHHHHHHHHHHHh--------CCCEEEEECCCcCCCCCCccc--ccCCHH
Confidence 56889999887533 588999999999999999999999998 999999999999999997665 567999
Q ss_pred HHHHHHHHHHH
Q 020518 107 NAANDLANLVK 117 (325)
Q Consensus 107 ~~~~~l~~~l~ 117 (325)
++++|+..+++
T Consensus 69 ~~v~D~~~~~~ 79 (79)
T PF12146_consen 69 DYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHhC
Confidence 99999998874
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-13 Score=108.67 Aligned_cols=249 Identities=16% Similarity=0.153 Sum_probs=87.7
Q ss_pred CCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
....||||.|++..- .....++..|.. .+|.++-+-++-....- ...++++.++||.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~--------~~wsl~q~~LsSSy~G~------G~~SL~~D~~eI~~~v~yl 97 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEE--------TGWSLFQVQLSSSYSGW------GTSSLDRDVEEIAQLVEYL 97 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT---------TT-EEEEE--GGGBTTS-------S--HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhcc--------CCeEEEEEEecCccCCc------CcchhhhHHHHHHHHHHHH
Confidence 456899999998754 334556666754 69999999876211110 2457888888888887754
Q ss_pred --------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH---HHHHHHHhhcC
Q 020518 120 --------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE---VEKVLQTLQSL 188 (325)
Q Consensus 120 --------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~---~~~~~~~~~~~ 188 (325)
+.+ +|+|+|||.|+.-+++|+...... .....|++.||-+|............. ..+.+......
T Consensus 98 r~~~~g~~~~~-kIVLmGHSTGcQdvl~Yl~~~~~~---~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~ 173 (303)
T PF08538_consen 98 RSEKGGHFGRE-KIVLMGHSTGCQDVLHYLSSPNPS---PSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKEL 173 (303)
T ss_dssp HHHS------S--EEEEEECCHHHHHHHHHHH-TT------CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHH
T ss_pred HHhhccccCCc-cEEEEecCCCcHHHHHHHhccCcc---ccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHH
Confidence 234 899999999999999999875310 002379999999998765543333222 22222221111
Q ss_pred CCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCCCcccccccChhHHHHhhhc-ccCCcccccccCCCCCCcEEEEe
Q 020518 189 PSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-YREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
.........+...+.... ..-...+|..-. ....-.+++.. +....+...+..+. +|+|++.
T Consensus 174 i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~------------s~~gdDD~FSSDL~de~l~~tfG~v~--~plLvl~ 239 (303)
T PF08538_consen 174 IAEGKGDEILPREFTPLVFYDTPITAYRFLSLA------------SPGGDDDYFSSDLSDERLKKTFGKVS--KPLLVLY 239 (303)
T ss_dssp HHCT-TT-GG----GGTTT-SS---HHHHHT-S-------------SSHHHHTHHHHHTT-HHHHTGGG----S-EEEEE
T ss_pred HHcCCCCceeeccccccccCCCcccHHHHHhcc------------CCCCcccccCCCCCHHHHHHHhccCC--CceEEEe
Confidence 000000000000000000 001111111111 11122223322 11222333445555 5999999
Q ss_pred eCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccCh----HHHHHHHHHHHh
Q 020518 265 AEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP----KGLLEIVAPRIA 323 (325)
Q Consensus 265 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 323 (325)
+++|..+|+..- +.+.+.+....+...-...-.++|||+|.+--+.. +.+.+.|..||+
T Consensus 240 Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 240 SGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp E--TT-----------------------------------------------------------
T ss_pred cCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999999987432 22222222211100001224589999999875433 358888888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-14 Score=127.98 Aligned_cols=111 Identities=19% Similarity=0.174 Sum_probs=85.9
Q ss_pred ccccceEEEEcccCC-----CCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC---
Q 020518 25 RSLQTLAYEEVRSSS-----DRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI--- 96 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~-----~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~--- 96 (325)
.++.++.|...+.+. +....|+|||+||++++...|..+++.|.+ .||+|+++|+||||.|...
T Consensus 425 p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~--------~Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 425 PNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAA--------AGVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred cCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHh--------CCcEEEEeCCCCCCcccccccc
Confidence 456666666654432 122346899999999999999999999987 7999999999999999443
Q ss_pred ------CCCCC-----------CCCHHHHHHHHHHHHHHhC----------------CCCCEEEEEeChhHHHHHHHHHH
Q 020518 97 ------EGLDP-----------PHDIANAANDLANLVKAKG----------------WDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 97 ------~~~~~-----------~~~~~~~~~~l~~~l~~~~----------------~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
..... ...+.+.+.|+..+...+. .. +++++||||||+++..++..
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~-~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS-KVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC-cEEEEecCHHHHHHHHHHHh
Confidence 11001 2378999999998888776 23 89999999999999999976
Q ss_pred c
Q 020518 144 C 144 (325)
Q Consensus 144 ~ 144 (325)
.
T Consensus 576 a 576 (792)
T TIGR03502 576 A 576 (792)
T ss_pred c
Confidence 3
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.7e-12 Score=107.39 Aligned_cols=231 Identities=13% Similarity=0.042 Sum_probs=120.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC-CCCCCC------
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR-SAEIEG------ 98 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-S~~~~~------ 98 (325)
+|..++=.-+.+......-|.||.+||.++....|...+. ++. .||.|+++|.||+|. +.....
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~--------~G~~vl~~d~rGqg~~~~d~~~~~~~~~ 135 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAA--------AGYAVLAMDVRGQGGRSPDYRGSSGGTL 135 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHH--------TT-EEEEE--TTTSSSS-B-SSBSSS-S
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-ccc--------CCeEEEEecCCCCCCCCCCccccCCCCC
Confidence 3445544444443233557889999999998877776554 444 899999999999993 321110
Q ss_pred -------C---CCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEE
Q 020518 99 -------L---DPPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVL 162 (325)
Q Consensus 99 -------~---~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli 162 (325)
. ...+-+..+..|....++.+ +.+ ++.+.|.|.||.+++.+|+..| +|++++..
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~-rI~v~G~SqGG~lal~~aaLd~---------rv~~~~~~ 205 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGK-RIGVTGGSQGGGLALAAAALDP---------RVKAAAAD 205 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHSS---------T-SEEEEE
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcc-eEEEEeecCchHHHHHHHHhCc---------cccEEEec
Confidence 0 01122334445555555543 234 8999999999999999999876 69999998
Q ss_pred ecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcc
Q 020518 163 DSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY 242 (325)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (325)
.|..... ...+..-. .. .....+..|+...-.. .......+..+
T Consensus 206 vP~l~d~---------~~~~~~~~----~~-------------~~y~~~~~~~~~~d~~----------~~~~~~v~~~L 249 (320)
T PF05448_consen 206 VPFLCDF---------RRALELRA----DE-------------GPYPEIRRYFRWRDPH----------HEREPEVFETL 249 (320)
T ss_dssp SESSSSH---------HHHHHHT------S-------------TTTHHHHHHHHHHSCT----------HCHHHHHHHHH
T ss_pred CCCccch---------hhhhhcCC----cc-------------ccHHHHHHHHhccCCC----------cccHHHHHHHH
Confidence 8765331 11111000 00 0011112222200000 01111122222
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHH-HHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGL-LEIVAPR 321 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~-~~~i~~f 321 (325)
.-.|......+++ +|+++-.|-.|..+||...-.....+.. ..++.+++..||.. +.++ .+...+|
T Consensus 250 ~Y~D~~nfA~ri~--~pvl~~~gl~D~~cPP~t~fA~yN~i~~-------~K~l~vyp~~~He~----~~~~~~~~~~~~ 316 (320)
T PF05448_consen 250 SYFDAVNFARRIK--CPVLFSVGLQDPVCPPSTQFAAYNAIPG-------PKELVVYPEYGHEY----GPEFQEDKQLNF 316 (320)
T ss_dssp HTT-HHHHGGG----SEEEEEEETT-SSS-HHHHHHHHCC--S-------SEEEEEETT--SST----THHHHHHHHHHH
T ss_pred hhhhHHHHHHHcC--CCEEEEEecCCCCCCchhHHHHHhccCC-------CeeEEeccCcCCCc----hhhHHHHHHHHH
Confidence 2223333445555 8999999999999999776444444432 27999999999955 3444 6677777
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
|..
T Consensus 317 l~~ 319 (320)
T PF05448_consen 317 LKE 319 (320)
T ss_dssp HHH
T ss_pred Hhc
Confidence 753
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.6e-13 Score=102.29 Aligned_cols=226 Identities=15% Similarity=0.146 Sum_probs=112.4
Q ss_pred cccccceEEEEcccCCCCCC-CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPY-TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDP 101 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~-~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~ 101 (325)
+.+|..|+.++..|..+.+. .++||+.+||+.....|..++.+|+. .||+|+.+|.-.| |.|+... .
T Consensus 9 ~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~--------NGFhViRyDsl~HvGlSsG~I---~ 77 (294)
T PF02273_consen 9 LEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSA--------NGFHVIRYDSLNHVGLSSGDI---N 77 (294)
T ss_dssp ETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHT--------TT--EEEE---B-------------
T ss_pred cCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhh--------CCeEEEeccccccccCCCCCh---h
Confidence 45788999998877655443 48999999999999999999999998 9999999998876 8888876 5
Q ss_pred CCCHHHHHHHHHHHHH---HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 102 PHDIANAANDLANLVK---AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~---~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
.+++....+++..+++ ..|.. ++-|+.-|+.|-+|+..|.+- .+.-+|..-+... +
T Consensus 78 eftms~g~~sL~~V~dwl~~~g~~-~~GLIAaSLSaRIAy~Va~~i----------~lsfLitaVGVVn----------l 136 (294)
T PF02273_consen 78 EFTMSIGKASLLTVIDWLATRGIR-RIGLIAASLSARIAYEVAADI----------NLSFLITAVGVVN----------L 136 (294)
T ss_dssp ---HHHHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTTS------------SEEEEES--S-----------H
T ss_pred hcchHHhHHHHHHHHHHHHhcCCC-cchhhhhhhhHHHHHHHhhcc----------CcceEEEEeeeee----------H
Confidence 7888888887766655 45778 899999999999999999853 3555555544321 1
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc---cccccCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY---WPLLEHPP 255 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 255 (325)
+..+.. .....+-.. ++. .+.....-.....+...+..-+-.....++ ...++.+
T Consensus 137 r~TLe~-----------------al~~Dyl~~---~i~-~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l- 194 (294)
T PF02273_consen 137 RDTLEK-----------------ALGYDYLQL---PIE-QLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRL- 194 (294)
T ss_dssp HHHHHH-----------------HHSS-GGGS----GG-G--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--
T ss_pred HHHHHH-----------------Hhccchhhc---chh-hCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhC-
Confidence 111111 100000000 000 000000001111111222211111111111 1233344
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 311 (325)
.+|++.+++++|.++....+..+...+.. +.+++..++|++|... |+|
T Consensus 195 -~iP~iaF~A~~D~WV~q~eV~~~~~~~~s------~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 195 -SIPFIAFTANDDDWVKQSEVEELLDNINS------NKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHTT-TT--------EEEEEETT-SS-TT-SSH
T ss_pred -CCCEEEEEeCCCccccHHHHHHHHHhcCC------CceeEEEecCccchhh-hCh
Confidence 48999999999999998777666554443 3489999999999875 444
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.54 E-value=4e-12 Score=96.35 Aligned_cols=89 Identities=20% Similarity=0.247 Sum_probs=68.5
Q ss_pred EEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 020518 47 AFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWP 124 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 124 (325)
|+++|||.++..+... +...+.+.. ....++.+|++ .+.++..+.+.+++++...+ .
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~------~~~~~~~p~l~--------------~~p~~a~~~l~~~i~~~~~~-~ 60 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHG------PDIQYPCPDLP--------------PFPEEAIAQLEQLIEELKPE-N 60 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhC------CCceEECCCCC--------------cCHHHHHHHHHHHHHhCCCC-C
Confidence 7999999999988765 344444422 34566666653 56778888999999999877 7
Q ss_pred EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 125 DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.|||.||||..|..+|.+++- ++ ||++|+..
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~----------~a-vLiNPav~ 92 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGL----------PA-VLINPAVR 92 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCC----------CE-EEEcCCCC
Confidence 9999999999999999999853 34 88998753
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.7e-13 Score=105.35 Aligned_cols=104 Identities=21% Similarity=0.246 Sum_probs=90.7
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWP 124 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 124 (325)
|+|+++|+.++....|..+...|. ....|+.++.||++.-.. ...+++++++...+.|.+...+++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~---------~~~~v~~l~a~g~~~~~~-----~~~~l~~~a~~yv~~Ir~~QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG---------PLLPVYGLQAPGYGAGEQ-----PFASLDDMAAAYVAAIRRVQPEGP 66 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc---------cCceeeccccCccccccc-----ccCCHHHHHHHHHHHHHHhCCCCC
Confidence 589999999999999999999998 568999999999987444 467999999999999999998889
Q ss_pred EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 125 DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
++|+|||+||.+|+..|.+--. ....|..++++|+.+.
T Consensus 67 y~L~G~S~GG~vA~evA~qL~~-----~G~~Va~L~llD~~~~ 104 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQLEA-----QGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEEeeccccHHHHHHHHHHHh-----CCCeEEEEEEeccCCC
Confidence 9999999999999999987533 1127999999999876
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.53 E-value=4e-12 Score=102.91 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=94.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE---GLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+..++|++|.+|-.+.|..++..|.+.+. ..+.|+++.+.||-.+.... .....++++++++.-.+++++.-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~-----~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLN-----PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCC-----CCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 56799999999999999999999997642 78999999999998776651 01268999999999888887653
Q ss_pred -----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 121 -----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 121 -----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+.+++++|||.|+.++++.+.+.++ ...+|.+++++-|+....
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~-----~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPD-----LKFRVKKVILLFPTIEDI 125 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccc-----cCCceeEEEEeCCccccc
Confidence 33479999999999999999999991 012899999999875444
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-12 Score=107.66 Aligned_cols=105 Identities=19% Similarity=0.166 Sum_probs=69.8
Q ss_pred CCCceEEEecCCCCCCCChHHH-HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSF-SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
...|+||++.|+-+-...+..+ .+.|.. .|+.++++|.||.|.|...+- ..+.+.+-..+.+.+...
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~--------rGiA~LtvDmPG~G~s~~~~l---~~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAP--------RGIAMLTVDMPGQGESPKWPL---TQDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHH--------CT-EEEEE--TTSGGGTTT-S----S-CCHHHHHHHHHHHHST
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHh--------CCCEEEEEccCCCcccccCCC---CcCHHHHHHHHHHHHhcCC
Confidence 4567788888887777665544 455666 899999999999999865331 222344555666666554
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.. ++.++|.|+||.+|.++|..+++ |++++|.++++.
T Consensus 257 ~VD~~-RV~~~G~SfGGy~AvRlA~le~~--------RlkavV~~Ga~v 296 (411)
T PF06500_consen 257 WVDHT-RVGAWGFSFGGYYAVRLAALEDP--------RLKAVVALGAPV 296 (411)
T ss_dssp TEEEE-EEEEEEETHHHHHHHHHHHHTTT--------T-SEEEEES---
T ss_pred ccChh-heEEEEeccchHHHHHHHHhccc--------ceeeEeeeCchH
Confidence 345 89999999999999999998888 999999999864
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.7e-12 Score=98.92 Aligned_cols=179 Identities=21% Similarity=0.233 Sum_probs=129.8
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCC----C----CCCHHHHHHHHHHH
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLD----P----PHDIANAANDLANL 115 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~----~----~~~~~~~~~~l~~~ 115 (325)
|.||++|++.+-....+.+++.|+. .||.|+++|+-+. |.+....... . ..+..+...|+.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~--------~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~ 99 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAK--------AGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAA 99 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHh--------CCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHH
Confidence 8999999999988899999999998 9999999998773 3333222100 1 12336777888888
Q ss_pred HHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 116 VKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 116 l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
++.+. .+ ++.++|+||||.+++.++.+.|+ +++.+..-+.......
T Consensus 100 ~~~L~~~~~~~~~-~ig~~GfC~GG~~a~~~a~~~~~---------v~a~v~fyg~~~~~~~------------------ 151 (236)
T COG0412 100 LDYLARQPQVDPK-RIGVVGFCMGGGLALLAATRAPE---------VKAAVAFYGGLIADDT------------------ 151 (236)
T ss_pred HHHHHhCCCCCCc-eEEEEEEcccHHHHHHhhcccCC---------ccEEEEecCCCCCCcc------------------
Confidence 77662 34 79999999999999999999875 8888776655321100
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
....+.++|+++++|+.|.
T Consensus 152 -------------------------------------------------------------~~~~~~~~pvl~~~~~~D~ 170 (236)
T COG0412 152 -------------------------------------------------------------ADAPKIKVPVLLHLAGEDP 170 (236)
T ss_pred -------------------------------------------------------------cccccccCcEEEEecccCC
Confidence 0011234899999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC-----------hHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN-----------PKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-----------p~~~~~~i~~fl~~ 324 (325)
.++....+.+.+.+...+. ++++.+++++.|.++-+. .+.-.+.+.+|+++
T Consensus 171 ~~p~~~~~~~~~~~~~~~~----~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 171 YIPAADVDALAAALEDAGV----KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred CCChhHHHHHHHHHHhcCC----CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 9999888888887777542 289999999989887442 13444555666653
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=129.45 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=88.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+++++|+||++++...|..+...|. .+++|++++++|++.+.. ..++++++++++.+.++.+...+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~---------~~~~v~~~~~~g~~~~~~-----~~~~l~~la~~~~~~i~~~~~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD---------PQWSIYGIQSPRPDGPMQ-----TATSLDEVCEAHLATLLEQQPHG 1133 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC---------CCCcEEEEECCCCCCCCC-----CCCCHHHHHHHHHHHHHhhCCCC
Confidence 5789999999999999999998887 678999999999987632 46899999999999999876555
Q ss_pred CEEEEEeChhHHHHHHHHHHc---cccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSC---ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~---p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++++||||||.+|+++|.+. ++ ++..++++++.+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~--------~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGE--------EVAFLGLLDTWP 1171 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCC--------ceeEEEEecCCC
Confidence 899999999999999999874 55 899999998754
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-11 Score=102.11 Aligned_cols=259 Identities=13% Similarity=0.106 Sum_probs=148.0
Q ss_pred CceEEEecCCCCCCCCh-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNW-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.|+||++.-+.+..... +.+++.|. .|+.|+.+|+..-+...... ..++++++++-+.++++++|.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll---------~g~dVYl~DW~~p~~vp~~~---~~f~ldDYi~~l~~~i~~~G~- 168 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALL---------PDHDVYITDWVNARMVPLSA---GKFDLEDYIDYLIEFIRFLGP- 168 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHh---------CCCcEEEEeCCCCCCCchhc---CCCCHHHHHHHHHHHHHHhCC-
Confidence 37999999988644333 34555555 79999999998777554322 578999999999999999974
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH------HHHHHhh-cCCC-----
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE------KVLQTLQ-SLPS----- 190 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~----- 190 (325)
+++++|+|+||..++.+++...+... ..+++++++++++............+. ...+.+. ..+.
T Consensus 169 -~v~l~GvCqgG~~~laa~Al~a~~~~---p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~ 244 (406)
T TIGR01849 169 -DIHVIAVCQPAVPVLAAVALMAENEP---PAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGA 244 (406)
T ss_pred -CCcEEEEchhhHHHHHHHHHHHhcCC---CCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCC
Confidence 48999999999998888777633110 117999999998765543211111111 1111111 1111
Q ss_pred ---CCCcHHHHHHHHHhhcc---chhHHHHHhhcccCCCcc------------cccccChhHHHHhhhcc-cCCc-----
Q 020518 191 ---SIPSRKWLVNHMMELGF---SKSLSEWIGTNLKKSGER------------ETWAFNLDGAVQMFNSY-REMS----- 246 (325)
Q Consensus 191 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~----- 246 (325)
..+... ....+..... .....+++........+. .........+..++... ....
T Consensus 245 gr~v~PG~~-~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~ 323 (406)
T TIGR01849 245 GRLVYPGFL-QLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGK 323 (406)
T ss_pred CCcccCHHH-HHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCc
Confidence 111111 1111111010 111111111110000000 00011122222222221 1111
Q ss_pred -----ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc---ChHHHHHHH
Q 020518 247 -----YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGLLEIV 318 (325)
Q Consensus 247 -----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i 318 (325)
..-.+.+|+ ++|++.|.|++|+++++.....+.++..+++.. +.+..+.+++||.-.+. -++++...|
T Consensus 324 l~v~G~~Vdl~~I~-~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~---~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i 399 (406)
T TIGR01849 324 FIVEGKRVDPGAIT-RVALLTVEGENDDISGLGQTKAALRLCTGIPED---MKRHHLQPGVGHYGVFSGSRFREEIYPLV 399 (406)
T ss_pred EEECCEEecHHHCc-ccceEEEeccCCCcCCHHHhHHHHHHhhcCChh---hceEeecCCCCeEEEeeChhhhhhhchHH
Confidence 011222232 289999999999999999999999987554431 25677787889998874 467888999
Q ss_pred HHHHhc
Q 020518 319 APRIAS 324 (325)
Q Consensus 319 ~~fl~~ 324 (325)
.+||.+
T Consensus 400 ~~wl~~ 405 (406)
T TIGR01849 400 REFIRR 405 (406)
T ss_pred HHHHHh
Confidence 999875
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.43 E-value=7e-12 Score=99.62 Aligned_cols=216 Identities=13% Similarity=0.160 Sum_probs=125.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHH-hhhhccCCCCceEE--EEeCCCCC----CC--C-CCCC----CCC-CC-CCHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLA-STLSQTSASSEWRM--VLVDLRNH----GR--S-AEIE----GLD-PP-HDIA 106 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~v--i~~D~~G~----G~--S-~~~~----~~~-~~-~~~~ 106 (325)
+..|.||+||++++...+..++..+. +.- ..-.+ +-++.-|. |. . ...+ .+. .. .+..
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~------~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~ 83 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQG------VAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYK 83 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCST------S-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcC------CCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHH
Confidence 46799999999999999999999997 421 12233 33333342 21 1 1111 000 22 4688
Q ss_pred HHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 107 NAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 107 ~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
..+..+..+|..| +++ ++.+|||||||..++.|+..+.... ....+.++|.|+++............
T Consensus 84 ~qa~wl~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~---~~P~l~K~V~Ia~pfng~~~~~~~~~----- 154 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDK---NLPKLNKLVTIAGPFNGILGMNDDQN----- 154 (255)
T ss_dssp HHHHHHHHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGT---TS-EEEEEEEES--TTTTTCCSC-TT-----
T ss_pred HHHHHHHHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCC---CCcccceEEEeccccCccccccccch-----
Confidence 8888888888766 678 9999999999999999998864311 11268999999986433211100000
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
........+. .....+..+...+ -..++..+.+|-
T Consensus 155 --~~~~~~~gp~-----------------------------------~~~~~y~~l~~~~--------~~~~p~~i~VLn 189 (255)
T PF06028_consen 155 --QNDLNKNGPK-----------------------------------SMTPMYQDLLKNR--------RKNFPKNIQVLN 189 (255)
T ss_dssp --TT-CSTT-BS-----------------------------------S--HHHHHHHHTH--------GGGSTTT-EEEE
T ss_pred --hhhhcccCCc-----------------------------------ccCHHHHHHHHHH--------HhhCCCCeEEEE
Confidence 0000000000 0011111111110 123445578999
Q ss_pred EeeC------CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC--CCccccccChHHHHHHHHHHHh
Q 020518 263 VRAE------KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN--AGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 263 i~g~------~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
|.|. .|..||...+..+..++..... .-+-.++.| +.|.-..|+| +|.+.|.+||-
T Consensus 190 I~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~----~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 190 IYGDLEDGSNSDGIVPNASSLSLRYLLKNRAK----SYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp EEEESBTTCSBTSSSBHHHHCTHHHHCTTTSS----EEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred EecccCCCCCCCeEEeHHHHHHHHHHhhcccC----ceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 9998 7889999888888888866443 266677765 6898888876 67789999983
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.4e-11 Score=86.75 Aligned_cols=172 Identities=16% Similarity=0.167 Sum_probs=112.6
Q ss_pred CceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.+.+|++||+.+|. .+|....+ ..+ ...+ .+++. .. ..-..+++++.+.+.+... .+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we---~~l------~~a~--rveq~--------~w--~~P~~~dWi~~l~~~v~a~-~~ 59 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWE---SAL------PNAR--RVEQD--------DW--EAPVLDDWIARLEKEVNAA-EG 59 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHH---hhC------ccch--hcccC--------CC--CCCCHHHHHHHHHHHHhcc-CC
Confidence 35799999998766 56665432 211 1111 11111 11 4557889999888888887 34
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++||+||+|+.+++.++.+... .|.+++|++++-...... . .
T Consensus 60 -~~vlVAHSLGc~~v~h~~~~~~~--------~V~GalLVAppd~~~~~~-~----~----------------------- 102 (181)
T COG3545 60 -PVVLVAHSLGCATVAHWAEHIQR--------QVAGALLVAPPDVSRPEI-R----P----------------------- 102 (181)
T ss_pred -CeEEEEecccHHHHHHHHHhhhh--------ccceEEEecCCCcccccc-c----h-----------------------
Confidence 79999999999999999998877 899999999863211000 0 0
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
......+. .+..+..-|.++|...+|++++.+..+.+...
T Consensus 103 -------------------------------------~~~~tf~~---~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 103 -------------------------------------KHLMTFDP---IPREPLPFPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred -------------------------------------hhccccCC---CccccCCCceeEEEecCCCCCCHHHHHHHHHh
Confidence 00000011 11222235889999999999999888777776
Q ss_pred hhhcCCCCCCceeEEEecCCCcccccc---ChHHHHHHHHHHHh
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGLLEIVAPRIA 323 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i~~fl~ 323 (325)
.. +.++.+.++||+.-.+ .-.+....+.+|+.
T Consensus 143 wg---------s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 143 WG---------SALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred cc---------HhheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 65 6899999999976543 33455556666654
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.2e-11 Score=99.74 Aligned_cols=127 Identities=19% Similarity=0.214 Sum_probs=92.8
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChH------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE 97 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 97 (325)
+.||..+....+.... ..+|+|++.||+.+++..|- .+.-.|++ +||.|+.-+.||.-.|.+..
T Consensus 55 T~DgYiL~lhRIp~~~--~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~Lad--------aGYDVWLgN~RGn~ySr~h~ 124 (403)
T KOG2624|consen 55 TEDGYILTLHRIPRGK--KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLAD--------AGYDVWLGNNRGNTYSRKHK 124 (403)
T ss_pred ccCCeEEEEeeecCCC--CCCCcEEEeeccccccccceecCccccHHHHHHH--------cCCceeeecCcCcccchhhc
Confidence 3566655555443322 56899999999999999994 34555666 89999999999987775432
Q ss_pred CC-------CCCCCHHHHHH-HH----HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 98 GL-------DPPHDIANAAN-DL----ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 98 ~~-------~~~~~~~~~~~-~l----~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.. ...+++.+++. || ..+++..+.+ +++.||||.|+.+....+...|+-. .+|+..++++|+
T Consensus 125 ~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~-----~kI~~~~aLAP~ 198 (403)
T KOG2624|consen 125 KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE-KLHYVGHSQGTTTFFVMLSERPEYN-----KKIKSFIALAPA 198 (403)
T ss_pred ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcccc-ceEEEEEEccchhheehhcccchhh-----hhhheeeeecch
Confidence 11 14567777653 44 4444555667 9999999999999999999887621 379999999988
Q ss_pred C
Q 020518 166 P 166 (325)
Q Consensus 166 ~ 166 (325)
.
T Consensus 199 ~ 199 (403)
T KOG2624|consen 199 A 199 (403)
T ss_pred h
Confidence 6
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.9e-12 Score=96.87 Aligned_cols=228 Identities=13% Similarity=0.095 Sum_probs=134.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC----CCCC-C
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE----IEGL-D 100 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~----~~~~-~ 100 (325)
.|.+|.-+..-+.......|.||-.||+++....|..+...-. .||.|+.+|-||.|.|.. ++.. .
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~---------~Gyavf~MdvRGQg~~~~dt~~~p~~~s 135 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV---------AGYAVFVMDVRGQGSSSQDTADPPGGPS 135 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc---------cceeEEEEecccCCCccccCCCCCCCCc
Confidence 4566665554444333567899999999999988877665444 899999999999998843 2110 0
Q ss_pred -------------CCCCHHHHHHHHHHHHH------HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEE
Q 020518 101 -------------PPHDIANAANDLANLVK------AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161 (325)
Q Consensus 101 -------------~~~~~~~~~~~l~~~l~------~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvl 161 (325)
..|-+.....|+..+++ ..+.+ ++.+.|.|.||.+++.+++..| ++++++.
T Consensus 136 ~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~-Ri~v~G~SqGGglalaaaal~~---------rik~~~~ 205 (321)
T COG3458 136 DPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEE-RIGVTGGSQGGGLALAAAALDP---------RIKAVVA 205 (321)
T ss_pred CCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchh-heEEeccccCchhhhhhhhcCh---------hhhcccc
Confidence 11112233344444443 33445 8999999999999999999887 6999888
Q ss_pred EecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhc
Q 020518 162 LDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS 241 (325)
Q Consensus 162 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (325)
+-|..+..+. ++.. ...... .++..+++..-.. ....+..
T Consensus 206 ~~Pfl~df~r---------~i~~-----~~~~~y-------------dei~~y~k~h~~~-------------e~~v~~T 245 (321)
T COG3458 206 DYPFLSDFPR---------AIEL-----ATEGPY-------------DEIQTYFKRHDPK-------------EAEVFET 245 (321)
T ss_pred cccccccchh---------heee-----cccCcH-------------HHHHHHHHhcCch-------------HHHHHHH
Confidence 7766433211 1100 000011 1111122211100 1111122
Q ss_pred ccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 242 YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
+.-.|......+++ +|+|+..|-.|++++|...-.+...+.. ..+..+++.-+|. +-|.-..+.+..|
T Consensus 246 L~yfD~~n~A~RiK--~pvL~svgL~D~vcpPstqFA~yN~l~~-------~K~i~iy~~~aHe---~~p~~~~~~~~~~ 313 (321)
T COG3458 246 LSYFDIVNLAARIK--VPVLMSVGLMDPVCPPSTQFAAYNALTT-------SKTIEIYPYFAHE---GGPGFQSRQQVHF 313 (321)
T ss_pred HhhhhhhhHHHhhc--cceEEeecccCCCCCChhhHHHhhcccC-------CceEEEeeccccc---cCcchhHHHHHHH
Confidence 22223333344555 8999999999999999765444444433 1677778776664 3455555556666
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
++.
T Consensus 314 l~~ 316 (321)
T COG3458 314 LKI 316 (321)
T ss_pred HHh
Confidence 653
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=93.42 Aligned_cols=251 Identities=16% Similarity=0.153 Sum_probs=138.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.||..+.-..+...+. ....|+.-.+.+.....|++++..+++ .||.|..+|+||.|.|.........+.
T Consensus 13 ~DG~~l~~~~~pA~~~--~~g~~~va~a~Gv~~~fYRrfA~~a~~--------~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 13 PDGYSLPGQRFPADGK--ASGRLVVAGATGVGQYFYRRFAAAAAK--------AGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred CCCccCccccccCCCC--CCCcEEecccCCcchhHhHHHHHHhhc--------cCceEEEEecccccCCCccccccCccc
Confidence 4677776666655321 222455555556666777788887776 999999999999999988764334567
Q ss_pred HHHHHH-HHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 105 IANAAN-DLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 105 ~~~~~~-~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+.|++. |+.+.++.++ ...+.+.||||+||.+.-.+.+ ++ +.......++.+...........+..
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~---------k~~a~~vfG~gagwsg~m~~~~~l~~ 152 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP---------KYAAFAVFGSGAGWSGWMGLRERLGA 152 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc---------ccceeeEeccccccccchhhhhcccc
Confidence 777653 4555554442 3448999999999997655544 33 34444444444332211100000000
Q ss_pred HHHHhhcC--CCCCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 181 VLQTLQSL--PSSIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 181 ~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
+ .+..+ +........+...+.... .-+...+|......... -.... ...+..+
T Consensus 153 ~--~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fd--------dp~~~---------~~~q~ya 213 (281)
T COG4757 153 V--LLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFD--------DPAMR---------NYRQVYA 213 (281)
T ss_pred e--eeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcccccc--------ChhHh---------HHHHHHH
Confidence 0 00000 000000000111111111 11122223222210000 00000 1112223
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCC----CccccccCh-HHHHHHHHHHH
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNA----GHWVHVDNP-KGLLEIVAPRI 322 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----gH~~~~e~p-~~~~~~i~~fl 322 (325)
.+. +|++.+...+|+..|+...+.+.....+.+ .+...++.+ ||+-..-+| |.+.+.+.+|+
T Consensus 214 aVr--tPi~~~~~~DD~w~P~As~d~f~~~y~nAp------l~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 214 AVR--TPITFSRALDDPWAPPASRDAFASFYRNAP------LEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred Hhc--CceeeeccCCCCcCCHHHHHHHHHhhhcCc------ccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 333 799999999999999999999988888744 566666554 999988877 77777776665
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.6e-11 Score=107.19 Aligned_cols=216 Identities=12% Similarity=0.067 Sum_probs=132.1
Q ss_pred ccccceEE-EEcccCC-CCCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC---CC
Q 020518 25 RSLQTLAY-EEVRSSS-DRPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE---IE 97 (325)
Q Consensus 25 ~~~~~l~y-~~~~~~~-~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~---~~ 97 (325)
.||.+|.+ ..+.+.. .....|.||++||..+... .|......|.+ +||.|+.++.||-|.-.. ..
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~--------rG~~v~~~n~RGs~g~G~~w~~~ 495 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD--------RGFVYAIVHVRGGGELGQQWYED 495 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH--------CCcEEEEEEcCCCCccCHHHHHh
Confidence 57888886 3443321 2244699999999877663 46665666776 899999999998653321 11
Q ss_pred C--CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 98 G--LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 98 ~--~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
+ .....+++|+++.+..++++- ..+ ++.+.|.|.||.++..++.++|+ +++++|...+.....
T Consensus 496 g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~-rl~i~G~S~GG~l~~~~~~~~Pd--------lf~A~v~~vp~~D~~---- 562 (686)
T PRK10115 496 GKFLKKKNTFNDYLDACDALLKLGYGSPS-LCYGMGGSAGGMLMGVAINQRPE--------LFHGVIAQVPFVDVV---- 562 (686)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCChH-HeEEEEECHHHHHHHHHHhcChh--------heeEEEecCCchhHh----
Confidence 0 003457778777777777653 235 89999999999999999999999 999999887764321
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
..+..- .......+ ..+|- ... + .....++..+.. ...+.+
T Consensus 563 ---------~~~~~~-~~p~~~~~-------------~~e~G----~p~--------~-~~~~~~l~~~SP---~~~v~~ 603 (686)
T PRK10115 563 ---------TTMLDE-SIPLTTGE-------------FEEWG----NPQ--------D-PQYYEYMKSYSP---YDNVTA 603 (686)
T ss_pred ---------hhcccC-CCCCChhH-------------HHHhC----CCC--------C-HHHHHHHHHcCc---hhccCc
Confidence 111000 00000000 00000 000 0 001111222221 122333
Q ss_pred CCCCCc-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEe---cCCCccc
Q 020518 254 PPQGME-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVL---PNAGHWV 306 (325)
Q Consensus 254 ~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gH~~ 306 (325)
+ ..| +|+++|.+|..|++....++...+...+. +++++++ +++||..
T Consensus 604 ~--~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~----~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 604 Q--AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT----DDHLLLLCTDMDSGHGG 654 (686)
T ss_pred c--CCCceeEEecCCCCCcCchHHHHHHHHHHhcCC----CCceEEEEecCCCCCCC
Confidence 3 268 56679999999999888888777776543 2677777 8999984
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=97.34 Aligned_cols=112 Identities=20% Similarity=0.197 Sum_probs=73.6
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA----ANDLANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~----~~~l~~~l~~ 118 (325)
++.|||||||.+++...|+.+...+.+..........++++++|+......-. ...+.+. .+.+..+++.
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~------g~~l~~q~~~~~~~i~~i~~~ 76 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH------GRTLQRQAEFLAEAIKYILEL 76 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc------cccHHHHHHHHHHHHHHHHHh
Confidence 47899999999999988888876663211111112468899999876543222 1223333 3334444444
Q ss_pred h-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 119 K-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 119 ~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
. ..+ ++++|||||||.+|..++...+. ....|+.+|.++++.
T Consensus 77 ~~~~~~~~~-~vilVgHSmGGlvar~~l~~~~~-----~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 77 YKSNRPPPR-SVILVGHSMGGLVARSALSLPNY-----DPDSVKTIITLGTPH 123 (225)
T ss_pred hhhccCCCC-ceEEEEEchhhHHHHHHHhcccc-----ccccEEEEEEEcCCC
Confidence 4 345 89999999999999988876442 112799999999764
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3e-11 Score=105.20 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=90.3
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh----------hccCCCCceEEEEeCCC-CCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL----------SQTSASSEWRMVLVDLR-NHGRSAE 95 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~vi~~D~~-G~G~S~~ 95 (325)
+..+.|.-+.+.....+.|.||+++|.++++..+-.+.+ ..... ...+-++...++.+|.| |+|.|..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E-~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAE-NGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhcc-CCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccC
Confidence 567888887766555678999999999998865422211 10000 00012345689999975 8888876
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC--CccCCcceEEEEecCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG--QFVALPKQLWVLDSVP 166 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~--~~~~~v~~lvli~~~~ 166 (325)
... ....+.++.++|+.++++.. ... +++|+|||+||..+..+|.+.-++... .....++++++-++..
T Consensus 139 ~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~-~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 139 DKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRAN-DLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred CCC-CCCCChHHHHHHHHHHHHHHHHhCccccCC-CEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 432 13456788999998888854 335 999999999999998888764321110 0112578888877754
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-10 Score=94.44 Aligned_cols=242 Identities=16% Similarity=0.187 Sum_probs=131.0
Q ss_pred CCCceEEEecCCCCCCCChHH--H-HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-CCCCHHHH---------
Q 020518 42 PYTSTAFVLHGLLGSGRNWRS--F-SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-PPHDIANA--------- 108 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~--------- 108 (325)
+.+|.+|.++|-|+.. .|+. + +..|.+ .|+..+.+..|-||...+..... .-.+..|+
T Consensus 90 ~~rp~~IhLagTGDh~-f~rR~~l~a~pLl~--------~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~ 160 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG-FWRRRRLMARPLLK--------EGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATIL 160 (348)
T ss_pred CCCceEEEecCCCccc-hhhhhhhhhhHHHH--------cCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHH
Confidence 4688899999988744 4433 3 566666 89999999999999876544210 11122221
Q ss_pred -HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc
Q 020518 109 -ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187 (325)
Q Consensus 109 -~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (325)
+..|..++++.|.. ++.+.|.||||.+|...|+..|. .|..+-.+++.... .......+..
T Consensus 161 E~~~Ll~Wl~~~G~~-~~g~~G~SmGG~~A~laa~~~p~--------pv~~vp~ls~~sAs--~vFt~Gvls~------- 222 (348)
T PF09752_consen 161 ESRALLHWLEREGYG-PLGLTGISMGGHMAALAASNWPR--------PVALVPCLSWSSAS--VVFTEGVLSN------- 222 (348)
T ss_pred HHHHHHHHHHhcCCC-ceEEEEechhHhhHHhhhhcCCC--------ceeEEEeecccCCC--cchhhhhhhc-------
Confidence 22345555666888 99999999999999999999997 66555555533211 1111111111
Q ss_pred CCCCCCcHHHHHHHHHhhccchhHHHHHhhcccC-CCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 188 LPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKK-SGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
...+..+...+....+.+............ .........+.+....+...+........+......-.+++|.+.
T Consensus 223 ----~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~ 298 (348)
T PF09752_consen 223 ----SINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAK 298 (348)
T ss_pred ----CCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEec
Confidence 011111111110000001000000000000 000000000111111111111111111122222222357899999
Q ss_pred CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc-cccChHHHHHHHHHHHh
Q 020518 267 KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV-HVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 267 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~ 323 (325)
+|.++|......+++..+. +++..+++ ||.. ++-+.+.|.+.|.+-++
T Consensus 299 ~DaYVPr~~v~~Lq~~WPG--------sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 299 NDAYVPRHGVLSLQEIWPG--------SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CceEechhhcchHHHhCCC--------CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 9999998888888888876 99999998 9974 44677899999888665
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.7e-10 Score=88.46 Aligned_cols=103 Identities=21% Similarity=0.265 Sum_probs=65.3
Q ss_pred EEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----
Q 020518 47 AFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA----- 118 (325)
Q Consensus 47 vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~----- 118 (325)
||++||.+... .....++..+++. .|+.|+.+|+|=..... ....+++..+.+.-++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~-------~g~~v~~~~Yrl~p~~~------~p~~~~D~~~a~~~l~~~~~~~~ 67 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE-------RGFVVVSIDYRLAPEAP------FPAALEDVKAAYRWLLKNADKLG 67 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH-------HTSEEEEEE---TTTSS------TTHHHHHHHHHHHHHHHTHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh-------ccEEEEEeecccccccc------ccccccccccceeeecccccccc
Confidence 79999987643 4445566666643 68999999999331111 223344444444444554
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+.+ +++|+|+|.||.+++.++.+..+.. ...++++++++|...
T Consensus 68 ~d~~-~i~l~G~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 68 IDPE-RIVLIGDSAGGHLALSLALRARDRG----LPKPKGIILISPWTD 111 (211)
T ss_dssp EEEE-EEEEEEETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSS
T ss_pred cccc-ceEEeecccccchhhhhhhhhhhhc----ccchhhhhccccccc
Confidence 3456 8999999999999999998776511 114899999998643
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-10 Score=90.29 Aligned_cols=110 Identities=26% Similarity=0.314 Sum_probs=76.5
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
+=|.|||+||+......|..+..+++. .||-|+++|+...+...... ...+..++++++.+=++..
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAS--------hGyIVV~~d~~~~~~~~~~~---~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVAS--------HGYIVVAPDLYSIGGPDDTD---EVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHh--------CceEEEEecccccCCCCcch---hHHHHHHHHHHHHhcchhhccc
Confidence 468999999999877778889999998 89999999976644321111 1223344444433322221
Q ss_pred ----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 120 ----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 120 ----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.. ++.|.|||-||-+|..++..+-+... ..+++++++++|..+
T Consensus 85 ~v~~D~s-~l~l~GHSrGGk~Af~~al~~~~~~~---~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 85 GVKPDFS-KLALAGHSRGGKVAFAMALGNASSSL---DLRFSALILLDPVDG 132 (259)
T ss_pred ccccccc-ceEEeeeCCCCHHHHHHHhhhccccc---ccceeEEEEeccccc
Confidence 445 89999999999999999988721000 128999999999853
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.8e-09 Score=86.68 Aligned_cols=131 Identities=20% Similarity=0.133 Sum_probs=91.6
Q ss_pred ccccccceEEEEcccCCCC--CCCceEEEecCCCCC-----CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGS-----GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
+......+..+.|.+.... ...|.||++||.|.. +..|..++..++.. .+.-|+++|+|=--...
T Consensus 67 ~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~-------~~~vvvSVdYRLAPEh~- 138 (336)
T KOG1515|consen 67 TIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE-------LNCVVVSVDYRLAPEHP- 138 (336)
T ss_pred EecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHH-------cCeEEEecCcccCCCCC-
Confidence 3345667788877775443 357889999998762 45677888888765 57899999998333222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKA------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+..++|-.+.+.-+.++ .+.+ ++.|+|-|.||.+|..+|.+.-+.. ....++++.|++-|.....
T Consensus 139 -----~Pa~y~D~~~Al~w~~~~~~~~~~~D~~-rv~l~GDSaGGNia~~va~r~~~~~--~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 139 -----FPAAYDDGWAALKWVLKNSWLKLGADPS-RVFLAGDSAGGNIAHVVAQRAADEK--LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred -----CCccchHHHHHHHHHHHhHHHHhCCCcc-cEEEEccCccHHHHHHHHHHHhhcc--CCCcceEEEEEEecccCCC
Confidence 344566666666555553 2566 8999999999999999998865311 1123899999999875443
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-10 Score=86.75 Aligned_cols=185 Identities=21% Similarity=0.198 Sum_probs=118.1
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA----KG 120 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~----~~ 120 (325)
..+||+-|=++-...=..++..|++ +|+.|+.+|-+-|=.+.+ +.++.+.|+.++++. .+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~--------~G~~VvGvdsl~Yfw~~r--------tP~~~a~Dl~~~i~~y~~~w~ 66 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAK--------QGVPVVGVDSLRYFWSER--------TPEQTAADLARIIRHYRARWG 66 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHH--------CCCeEEEechHHHHhhhC--------CHHHHHHHHHHHHHHHHHHhC
Confidence 4578888777644333457777877 999999999776655544 456667777666654 46
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
.+ +++|+|.|+|+-+.-....+.|..... +|+.++|+++.....
T Consensus 67 ~~-~vvLiGYSFGADvlP~~~nrLp~~~r~----~v~~v~Ll~p~~~~d------------------------------- 110 (192)
T PF06057_consen 67 RK-RVVLIGYSFGADVLPFIYNRLPAALRA----RVAQVVLLSPSTTAD------------------------------- 110 (192)
T ss_pred Cc-eEEEEeecCCchhHHHHHhhCCHHHHh----heeEEEEeccCCcce-------------------------------
Confidence 67 999999999999999888888864433 899999999764221
Q ss_pred HHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
+.-....|+...... ...+..+.+.+++. .|+++|+|.+++-.....
T Consensus 111 ------Feihv~~wlg~~~~~---------------------~~~~~~pei~~l~~-~~v~CiyG~~E~d~~cp~----- 157 (192)
T PF06057_consen 111 ------FEIHVSGWLGMGGDD---------------------AAYPVIPEIAKLPP-APVQCIYGEDEDDSLCPS----- 157 (192)
T ss_pred ------EEEEhhhhcCCCCCc---------------------ccCCchHHHHhCCC-CeEEEEEcCCCCCCcCcc-----
Confidence 011111222211100 00122233444443 589999998876433221
Q ss_pred HHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.. ++++.+.+|| ||.+- ++.+.+++.|.+-|++
T Consensus 158 --l~~------~~~~~i~lpG-gHHfd-~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 158 --LRQ------PGVEVIALPG-GHHFD-GDYDALAKRILDALKA 191 (192)
T ss_pred --ccC------CCcEEEEcCC-CcCCC-CCHHHHHHHHHHHHhc
Confidence 111 2389999998 88765 4467777777776653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.6e-11 Score=93.26 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=95.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCC-ceEEEEeCCCCC-----CCCCC---------CCC---------
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASS-EWRMVLVDLRNH-----GRSAE---------IEG--------- 98 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~vi~~D~~G~-----G~S~~---------~~~--------- 98 (325)
.++.|+|+||++.++..|+.....|.+.+. + ++.++.+|-|-- |-... ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~-----~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 77 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALK-----KLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPD 77 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHH-----HTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHh-----hCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecC
Confidence 378899999999999999988888887764 4 788888876522 11110 000
Q ss_pred --CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchh
Q 020518 99 --LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEG 176 (325)
Q Consensus 99 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~ 176 (325)
......+++..+.+.+++++.+. =.-|+|+|.||.+|..++..............++-+|++++.......
T Consensus 78 ~~~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~----- 150 (212)
T PF03959_consen 78 DDDHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD----- 150 (212)
T ss_dssp S-SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE------
T ss_pred CCcccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-----
Confidence 00134567777788888888772 246999999999999998654321100011257788888776421100
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
+. ... .-.. .
T Consensus 151 -----------------------------------------------------------------~~--~~~-~~~~--i 160 (212)
T PF03959_consen 151 -----------------------------------------------------------------YQ--ELY-DEPK--I 160 (212)
T ss_dssp -----------------------------------------------------------------GT--TTT---TT---
T ss_pred -----------------------------------------------------------------hh--hhh-cccc--C
Confidence 00 000 0122 2
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN 310 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 310 (325)
++|+|.|+|.+|.+++++..+.+.+.... +.+++..++ ||.++...
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~-------~~~v~~h~g-GH~vP~~~ 206 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP-------DARVIEHDG-GHHVPRKK 206 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH-------HEEEEEESS-SSS----H
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC-------CcEEEEECC-CCcCcCCh
Confidence 48999999999999999888888888875 156677776 99988653
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.5e-10 Score=92.27 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=83.6
Q ss_pred cCCCCCCCceEEEecCCCCCCCChH-----HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHH--
Q 020518 37 SSSDRPYTSTAFVLHGLLGSGRNWR-----SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA-- 109 (325)
Q Consensus 37 ~~~~~~~~~~vv~~HG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-- 109 (325)
+..+..-++|++++|-+......|+ +++..|.+ .|+.|+.+++++=..+.. ..++++++
T Consensus 100 p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~--------~g~~vfvIsw~nPd~~~~------~~~~edYi~e 165 (445)
T COG3243 100 PLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLE--------QGLDVFVISWRNPDASLA------AKNLEDYILE 165 (445)
T ss_pred CCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHH--------cCCceEEEeccCchHhhh------hccHHHHHHH
Confidence 4334446789999999988776663 57777877 899999999987655544 33455555
Q ss_pred ---HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCC-cceEEEEecCCCCC
Q 020518 110 ---NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL-PKQLWVLDSVPGKV 169 (325)
Q Consensus 110 ---~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~-v~~lvli~~~~~~~ 169 (325)
+.+..+.+..+.+ ++.++|+|.||.++..+++.++. + |+.++++.+...+.
T Consensus 166 ~l~~aid~v~~itg~~-~InliGyCvGGtl~~~ala~~~~--------k~I~S~T~lts~~DF~ 220 (445)
T COG3243 166 GLSEAIDTVKDITGQK-DINLIGYCVGGTLLAAALALMAA--------KRIKSLTLLTSPVDFS 220 (445)
T ss_pred HHHHHHHHHHHHhCcc-ccceeeEecchHHHHHHHHhhhh--------cccccceeeecchhhc
Confidence 4455555666778 99999999999999999999988 5 99999988765443
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.6e-10 Score=91.46 Aligned_cols=124 Identities=18% Similarity=0.121 Sum_probs=80.2
Q ss_pred cccceEEEEccc-CCCCCCCceEEEecCCCCCCCChHHHH----------HHHHhhhhccCCCCceEEEEeCCCCCCCCC
Q 020518 26 SLQTLAYEEVRS-SSDRPYTSTAFVLHGLLGSGRNWRSFS----------RNLASTLSQTSASSEWRMVLVDLRNHGRSA 94 (325)
Q Consensus 26 ~~~~l~y~~~~~-~~~~~~~~~vv~~HG~~~~~~~~~~~~----------~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~ 94 (325)
||.+|....+.+ ......-|+||..|+++.+...-.... ..+.+ +||.|+..|.||.|.|.
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~--------~GY~vV~~D~RG~g~S~ 72 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAE--------RGYAVVVQDVRGTGGSE 72 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH--------TT-EEEEEE-TTSTTS-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHh--------CCCEEEEECCcccccCC
Confidence 577888888877 223345688999999986441111111 11555 89999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH---HHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 95 EIEGLDPPHDIANAANDLANLV---KAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~~l---~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.... . . ..+.++|..++| ..... +++|-++|.|++|..++.+|+..|. .+++++...+.....
T Consensus 73 G~~~--~-~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p--------~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 73 GEFD--P-M-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPP--------HLKAIVPQSGWSDLY 139 (272)
T ss_dssp S-B---T-T-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T--------TEEEEEEESE-SBTC
T ss_pred Cccc--c-C-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC--------CceEEEecccCCccc
Confidence 8653 1 1 444555544444 44332 2389999999999999999998887 899999987764433
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.1e-09 Score=74.55 Aligned_cols=103 Identities=22% Similarity=0.217 Sum_probs=76.8
Q ss_pred CceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCC-----CCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNH-----GRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
.-+||+-||.+.+.++ ...++..|+. .|+.|..++++-. |...+++. ...-..++...+.++.
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~--------~G~~vaRfefpYma~Rrtg~rkPp~~--~~t~~~~~~~~~aql~ 83 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALAR--------RGWLVARFEFPYMAARRTGRRKPPPG--SGTLNPEYIVAIAQLR 83 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHh--------CceeEEEeecchhhhccccCCCCcCc--cccCCHHHHHHHHHHH
Confidence 4579999999887654 4567777776 8999999998754 32223332 3344566777777777
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+.-. +.++-|+||||-++-+++..-.- .|+++++++-+
T Consensus 84 ~~l~~g-pLi~GGkSmGGR~aSmvade~~A--------~i~~L~clgYP 123 (213)
T COG3571 84 AGLAEG-PLIIGGKSMGGRVASMVADELQA--------PIDGLVCLGYP 123 (213)
T ss_pred hcccCC-ceeeccccccchHHHHHHHhhcC--------CcceEEEecCc
Confidence 777666 99999999999999999987655 68999988843
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.3e-09 Score=80.85 Aligned_cols=188 Identities=17% Similarity=0.101 Sum_probs=116.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC----CCCCC--------CCC-------------
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN----HGRSA--------EIE------------- 97 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G----~G~S~--------~~~------------- 97 (325)
.++-|+|+||+-.+...|..-...+.+.+. +-+.++.+|-|- -+.+. .+.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~-----k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n 78 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLK-----KLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNN 78 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHH-----hhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccc
Confidence 467899999999999888765444444442 346777777762 01111 010
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch
Q 020518 98 --GLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE 175 (325)
Q Consensus 98 --~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~ 175 (325)
.......+++-.+.|.+.+.+.|+= --|+|.|-|+.++..++...+.+..-.....++-+|++++.......
T Consensus 79 ~~~~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~---- 152 (230)
T KOG2551|consen 79 EASFTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK---- 152 (230)
T ss_pred ccccccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch----
Confidence 0002234566677788888888731 25899999999999998833221111112245667777765311000
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
. + ......+
T Consensus 153 ------~---------------------------------------------------------------~--~~~~~~~ 161 (230)
T KOG2551|consen 153 ------L---------------------------------------------------------------D--ESAYKRP 161 (230)
T ss_pred ------h---------------------------------------------------------------h--hhhhccC
Confidence 0 0 0001112
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.++|.|.|.|+.|.+++...++.+.+...+ ..+..-+| ||+++-.. ...+.|.+||+
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~--------a~vl~Hpg-gH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFKD--------ATVLEHPG-GHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcCC--------CeEEecCC-CccCCCch--HHHHHHHHHHH
Confidence 348999999999999999888888888886 66666675 99998754 55556666654
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-08 Score=85.84 Aligned_cols=124 Identities=20% Similarity=0.158 Sum_probs=80.5
Q ss_pred ccceEEEEccc-CCCCCCCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRS-SSDRPYTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 27 ~~~l~y~~~~~-~~~~~~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+..+.++.+.+ .......|+||++||.+... .....++..+... .|+.|+++|+|-.-.-. ..
T Consensus 61 ~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~-------~g~~vv~vdYrlaPe~~------~p 127 (312)
T COG0657 61 GDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAA-------AGAVVVSVDYRLAPEHP------FP 127 (312)
T ss_pred CCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHH-------cCCEEEecCCCCCCCCC------CC
Confidence 34456666665 23334579999999986633 3443455555443 89999999998443332 34
Q ss_pred CCHHHHHHHHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 103 HDIANAANDLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
..+++..+.+.-+.++ ++ .+ ++.++|+|.||.+++.++..-.+. ........+++.+....
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~-~i~v~GdSAGG~La~~~a~~~~~~----~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPS-RIAVAGDSAGGHLALALALAARDR----GLPLPAAQVLISPLLDL 193 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCcc-ceEEEecCcccHHHHHHHHHHHhc----CCCCceEEEEEecccCC
Confidence 4555544444444433 33 45 899999999999999999876541 01146888888887544
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.8e-09 Score=96.86 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=57.3
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-------------------CCCCEEEEEeChhHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG-------------------WDWPDVVIGHSMGGKVAL 138 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~-------------------~~~~~~lvGhS~Gg~~a~ 138 (325)
+||.|+..|.||+|.|..... ... .+..+|..++|+-+. .+++|.++|.|+||.+++
T Consensus 278 rGYaVV~~D~RGtg~SeG~~~---~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~ 353 (767)
T PRK05371 278 RGFAVVYVSGIGTRGSDGCPT---TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPN 353 (767)
T ss_pred CCeEEEEEcCCCCCCCCCcCc---cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHH
Confidence 899999999999999988542 221 333444444443332 024999999999999999
Q ss_pred HHHHHccccccCCccCCcceEEEEecCC
Q 020518 139 HFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 139 ~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+|...|. .++.+|.+++..
T Consensus 354 ~aAa~~pp--------~LkAIVp~a~is 373 (767)
T PRK05371 354 AVATTGVE--------GLETIIPEAAIS 373 (767)
T ss_pred HHHhhCCC--------cceEEEeeCCCC
Confidence 99999888 899999877653
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.16 E-value=4e-09 Score=82.06 Aligned_cols=121 Identities=20% Similarity=0.140 Sum_probs=77.5
Q ss_pred eEEEEcccCCCC-CCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCC------CCCCC
Q 020518 30 LAYEEVRSSSDR-PYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAE------IEGLD 100 (325)
Q Consensus 30 l~y~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~------~~~~~ 100 (325)
|.|+.|-++... ...|.||++||.+++...+... ...+++. .||-|+.++......... .....
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~-------~GfivvyP~~~~~~~~~~cw~w~~~~~~~ 73 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADR-------EGFIVVYPEQSRRANPQGCWNWFSDDQQR 73 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhc-------CCeEEEcccccccCCCCCccccccccccc
Confidence 457777665332 2458899999999988766542 3456654 788999888542111110 00000
Q ss_pred CCCCHHHHHHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 101 PPHDIANAANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.......++..+..+..+.. .+ +|++.|+|.||+.+..++..+|+ .+.++...++.+
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~-RVyv~G~S~Gg~ma~~la~~~pd--------~faa~a~~sG~~ 132 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPS-RVYVTGLSNGGMMANVLACAYPD--------LFAAVAVVSGVP 132 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCC-ceeeEEECHHHHHHHHHHHhCCc--------cceEEEeecccc
Confidence 11122223333344444444 45 89999999999999999999999 999988888764
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.4e-09 Score=83.43 Aligned_cols=99 Identities=19% Similarity=0.249 Sum_probs=73.1
Q ss_pred EecCCC--CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 49 VLHGLL--GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 49 ~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
++|+.+ ++...|..+...|. ..+.|+++|++|++.+... ..+++++++.+...+......++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~---------~~~~v~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~ 67 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR---------GRRDVSALPLPGFGPGEPL-----PASADALVEAQAEAVLRAAGGRPFV 67 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC---------CCccEEEecCCCCCCCCCC-----CCCHHHHHHHHHHHHHHhcCCCCeE
Confidence 455544 55667888888777 6689999999999876553 4577888887766655543333899
Q ss_pred EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++|||+||.++...+.+..+ ....+.+++++++..
T Consensus 68 l~g~s~Gg~~a~~~a~~l~~-----~~~~~~~l~~~~~~~ 102 (212)
T smart00824 68 LVGHSSGGLLAHAVAARLEA-----RGIPPAAVVLLDTYP 102 (212)
T ss_pred EEEECHHHHHHHHHHHHHHh-----CCCCCcEEEEEccCC
Confidence 99999999999999987543 011789999998754
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-09 Score=79.67 Aligned_cols=179 Identities=20% Similarity=0.255 Sum_probs=119.3
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC-----CCC----------CCCCCCCHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA-----EIE----------GLDPPHDIANA 108 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~-----~~~----------~~~~~~~~~~~ 108 (325)
..+||++||.+.+...|..++..|.- ++...|++.-|-.-.+. .+. .......+...
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l--------~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~a 74 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPL--------PNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRA 74 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCC--------CCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHH
Confidence 46899999999999999888877654 77788877544221110 000 00023345566
Q ss_pred HHHHHHHHHHh---C--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 109 ANDLANLVKAK---G--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 109 ~~~l~~~l~~~---~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
++.+..++++. + .+ ++.+-|.|+||++++..+..+|. .+.+++-..+.......
T Consensus 75 a~~i~~Li~~e~~~Gi~~~-rI~igGfs~G~a~aL~~~~~~~~--------~l~G~~~~s~~~p~~~~------------ 133 (206)
T KOG2112|consen 75 ADNIANLIDNEPANGIPSN-RIGIGGFSQGGALALYSALTYPK--------ALGGIFALSGFLPRASI------------ 133 (206)
T ss_pred HHHHHHHHHHHHHcCCCcc-ceeEcccCchHHHHHHHHhcccc--------ccceeeccccccccchh------------
Confidence 77777777654 3 24 78999999999999999999987 67776655544221100
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
.+..| ....+ .+|++..
T Consensus 134 --------------------------~~~~~------------------------------------~~~~~-~~~i~~~ 150 (206)
T KOG2112|consen 134 --------------------------GLPGW------------------------------------LPGVN-YTPILLC 150 (206)
T ss_pred --------------------------hccCC------------------------------------ccccC-cchhhee
Confidence 00000 00000 3689999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHH
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 318 (325)
+|+.|+++|-...+...+.+...... +++..+++.+|...-+.-+++...|
T Consensus 151 Hg~~d~~vp~~~g~~s~~~l~~~~~~----~~f~~y~g~~h~~~~~e~~~~~~~~ 201 (206)
T KOG2112|consen 151 HGTADPLVPFRFGEKSAQFLKSLGVR----VTFKPYPGLGHSTSPQELDDLKSWI 201 (206)
T ss_pred cccCCceeehHHHHHHHHHHHHcCCc----eeeeecCCccccccHHHHHHHHHHH
Confidence 99999999998888888888776653 8999999999987755444444333
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.2e-10 Score=81.89 Aligned_cols=113 Identities=13% Similarity=0.038 Sum_probs=69.8
Q ss_pred EEEEcccCCCCCCCceEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHH
Q 020518 31 AYEEVRSSSDRPYTSTAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107 (325)
Q Consensus 31 ~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 107 (325)
....+|+. ...+..||+||.-..... ...++..+.. .||+|..+ |++.+..... -..++.+
T Consensus 57 ~VDIwg~~---~~~klfIfIHGGYW~~g~rk~clsiv~~a~~--------~gY~vasv---gY~l~~q~ht--L~qt~~~ 120 (270)
T KOG4627|consen 57 LVDIWGST---NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVR--------RGYRVASV---GYNLCPQVHT--LEQTMTQ 120 (270)
T ss_pred EEEEecCC---CCccEEEEEecchhhcCchhcccchhhhhhh--------cCeEEEEe---ccCcCccccc--HHHHHHH
Confidence 34445553 457889999997432222 2223333333 89999998 4566654211 1223444
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 108 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...-+.-+++...-.+.+.+-|||.|+.+|+.+..|.-+ .+|.+++++++..
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~l~~GvY 172 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLILLCGVY 172 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-------chHHHHHHHhhHh
Confidence 444444445555433267788999999999999987543 3899999988763
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.7e-08 Score=72.74 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=37.3
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCce-eEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKV-SVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+++....|.+.+...+ .+.... + +..+.+|++|-+ +.=++....|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~a---~~~y~~--------~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRT---AEELHP--------YYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHH---HHHhcc--------CceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 458899999999887543 444444 5 888889877765 334667888888875
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.9e-09 Score=87.82 Aligned_cols=107 Identities=20% Similarity=0.220 Sum_probs=60.4
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCC-CCC-CC--------------------C
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS-AEI-EG--------------------L 99 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S-~~~-~~--------------------~ 99 (325)
..-|.|||-||++++...|..++..|+. .||-|+++|+|..-.+ ... .+ .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS--------~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELAS--------HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPL 169 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHH--------TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHh--------CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecc
Confidence 3468899999999999999999999998 8999999999953211 000 00 0
Q ss_pred CCC---C-------CHHHHHHHHHHHHHHh--------------------------CCCCCEEEEEeChhHHHHHHHHHH
Q 020518 100 DPP---H-------DIANAANDLANLVKAK--------------------------GWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 100 ~~~---~-------~~~~~~~~l~~~l~~~--------------------------~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
... . .++.-+.++..+++.+ +.+ ++.++|||+||..++..+.+
T Consensus 170 ~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~-~i~~~GHSFGGATa~~~l~~ 248 (379)
T PF03403_consen 170 RDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLS-RIGLAGHSFGGATALQALRQ 248 (379)
T ss_dssp ----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEE-EEEEEEETHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchh-heeeeecCchHHHHHHHHhh
Confidence 000 0 0111223333333222 133 69999999999999998887
Q ss_pred ccccccCCccCCcceEEEEecCC
Q 020518 144 CARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 144 ~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
. . +++..|++|++.
T Consensus 249 d-~--------r~~~~I~LD~W~ 262 (379)
T PF03403_consen 249 D-T--------RFKAGILLDPWM 262 (379)
T ss_dssp --T--------T--EEEEES---
T ss_pred c-c--------CcceEEEeCCcc
Confidence 6 3 799999999874
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.2e-10 Score=94.60 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=70.7
Q ss_pred CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhH
Q 020518 55 GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGG 134 (325)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 134 (325)
.....|..+++.|.+ .||.+ ..|++|+|.+.+.... ....++++.+.+.++.++.+.. +++|+||||||
T Consensus 105 ~~~~~~~~li~~L~~--------~GY~~-~~dL~g~gYDwR~~~~-~~~~~~~Lk~lIe~~~~~~g~~-kV~LVGHSMGG 173 (440)
T PLN02733 105 DEVYYFHDMIEQLIK--------WGYKE-GKTLFGFGYDFRQSNR-LPETMDGLKKKLETVYKASGGK-KVNIISHSMGG 173 (440)
T ss_pred chHHHHHHHHHHHHH--------cCCcc-CCCcccCCCCcccccc-HHHHHHHHHHHHHHHHHHcCCC-CEEEEEECHhH
Confidence 455789999999997 77755 8999999998775310 1122344444455555556667 99999999999
Q ss_pred HHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 135 KVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 135 ~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+++.++..+|+... ..|+++|.++++.
T Consensus 174 lva~~fl~~~p~~~~----k~I~~~I~la~P~ 201 (440)
T PLN02733 174 LLVKCFMSLHSDVFE----KYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHHCCHhHH----hHhccEEEECCCC
Confidence 999999999886221 1589999998763
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.4e-09 Score=83.88 Aligned_cols=52 Identities=17% Similarity=0.164 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 107 NAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 107 ~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
++.+...++|.+. ..+ ++.|+|.|.||-+|+.+|.++|+ |+.+|.++++...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~-~Igi~G~SkGaelALllAs~~~~---------i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPD-KIGIIGISKGAELALLLASRFPQ---------ISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--S-SEEEEEETHHHHHHHHHHHHSSS---------EEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCC-CEEEEEECHHHHHHHHHHhcCCC---------ccEEEEeCCceeE
Confidence 3455556666554 235 89999999999999999999995 9999999987533
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=84.23 Aligned_cols=110 Identities=23% Similarity=0.196 Sum_probs=80.4
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
..=|.|+|+||+.-....|..+..+++. .||-|+++++-.--. +.+.+...+....++++..-++++
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HIAS--------HGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp 112 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHIAS--------HGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLP 112 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHHhh--------cCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCC
Confidence 3458899999999999999999999997 899999999875311 221112233444455555445444
Q ss_pred -----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 120 -----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 120 -----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
++. ++.++|||.||..|..+|+.+.. ...++.||.+||..+..
T Consensus 113 ~~V~~nl~-klal~GHSrGGktAFAlALg~a~------~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 113 ENVEANLS-KLALSGHSRGGKTAFALALGYAT------SLKFSALIGIDPVAGTS 160 (307)
T ss_pred CCcccccc-eEEEeecCCccHHHHHHHhcccc------cCchhheecccccCCCC
Confidence 345 89999999999999999998742 13789999999986554
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.1e-08 Score=74.28 Aligned_cols=192 Identities=16% Similarity=0.129 Sum_probs=118.4
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCC-CCCCCCCCCCCC-----C
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDL-RNHGRSAEIEGL-----D 100 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~-~G~G~S~~~~~~-----~ 100 (325)
..+.-+..|+.. ++..||++--+.+.. ..-+..++.++. .||.|+.+|+ +|--.|...... -
T Consensus 26 ~gldaYv~gs~~---~~~~li~i~DvfG~~~~n~r~~Adk~A~--------~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~ 94 (242)
T KOG3043|consen 26 GGLDAYVVGSTS---SKKVLIVIQDVFGFQFPNTREGADKVAL--------NGYTVLVPDFFRGDPWSPSLQKSERPEWM 94 (242)
T ss_pred cCeeEEEecCCC---CCeEEEEEEeeeccccHHHHHHHHHHhc--------CCcEEEcchhhcCCCCCCCCChhhhHHHH
Confidence 344444455542 245666666554433 335566777775 8999999996 441111110000 0
Q ss_pred CCCCHHHHHHH---HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 101 PPHDIANAAND---LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 101 ~~~~~~~~~~~---l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
...+..-.-.+ +..+|+..+...++-++|.+|||.++..+....|+ +.+.+.+-|.....
T Consensus 95 ~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~---------f~a~v~~hps~~d~-------- 157 (242)
T KOG3043|consen 95 KGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPE---------FDAGVSFHPSFVDS-------- 157 (242)
T ss_pred hcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchh---------heeeeEecCCcCCh--------
Confidence 11122222233 34444455644489999999999999998888775 66666655442110
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
..+..++
T Consensus 158 -----------------------------------------------------------------------~D~~~vk-- 164 (242)
T KOG3043|consen 158 -----------------------------------------------------------------------ADIANVK-- 164 (242)
T ss_pred -----------------------------------------------------------------------hHHhcCC--
Confidence 0112223
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-----cCh------HHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-----DNP------KGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----e~p------~~~~~~i~~fl~ 323 (325)
+|++++.++.|..+++.....+.+.+...+.. ..++.++++.+|-.+. +.| |+..+.+.+|+.
T Consensus 165 ~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~---~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 165 APILFLFAELDEDVPPKDVKAWEEKLKENPAV---GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFK 238 (242)
T ss_pred CCEEEEeecccccCCHHHHHHHHHHHhcCccc---ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988876653 2579999999997763 344 344455555554
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.7e-09 Score=86.08 Aligned_cols=120 Identities=18% Similarity=0.170 Sum_probs=64.8
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC--------------h----HHHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN--------------W----RSFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~--------------~----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
.++.....-+.+-...-|.||++||-++..+. + ..+...|++ .||-|+++|.+|
T Consensus 99 ~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk--------~GYVvla~D~~g 170 (390)
T PF12715_consen 99 SRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAK--------RGYVVLAPDALG 170 (390)
T ss_dssp B-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHT--------TTSEEEEE--TT
T ss_pred eeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHh--------CCCEEEEEcccc
Confidence 34443333333223456899999998764311 1 124666776 899999999999
Q ss_pred CCCCCCCCCCC--CCCCHHHHHH---------------HHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 90 HGRSAEIEGLD--PPHDIANAAN---------------DLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 90 ~G~S~~~~~~~--~~~~~~~~~~---------------~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+|......... ..++...++. |....++.+ +.+ +|.++|+||||..++.+|+..+
T Consensus 171 ~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~-RIG~~GfSmGg~~a~~LaALDd- 248 (390)
T PF12715_consen 171 FGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPD-RIGCMGFSMGGYRAWWLAALDD- 248 (390)
T ss_dssp SGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEE-EEEEEEEGGGHHHHHHHHHH-T-
T ss_pred ccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCcc-ceEEEeecccHHHHHHHHHcch-
Confidence 99876544211 1222223222 112223332 345 8999999999999999999865
Q ss_pred cccCCccCCcceEEEEecC
Q 020518 147 ADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 147 ~~~~~~~~~v~~lvli~~~ 165 (325)
+|+..|..+..
T Consensus 249 --------RIka~v~~~~l 259 (390)
T PF12715_consen 249 --------RIKATVANGYL 259 (390)
T ss_dssp --------T--EEEEES-B
T ss_pred --------hhHhHhhhhhh
Confidence 68887776644
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=80.79 Aligned_cols=116 Identities=17% Similarity=0.121 Sum_probs=71.9
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
+++..+||+||+..+...-..-...+...+. -.-.++.+.+|..|.-..... ...+...-...+..+|..+
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~-----~~~~~i~FsWPS~g~~~~Y~~--d~~~a~~s~~~l~~~L~~L~~ 88 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLG-----FPGVVILFSWPSDGSLLGYFY--DRESARFSGPALARFLRDLAR 88 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhC-----CCceEEEEEcCCCCChhhhhh--hhhhHHHHHHHHHHHHHHHHh
Confidence 3578999999999875443333333443221 222899999998886322211 1223444455566666554
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHHHccccccC-CccCCcceEEEEecC
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQSCARADYG-QFVALPKQLWVLDSV 165 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~-~~~~~v~~lvli~~~ 165 (325)
+.. ++++++||||+.+.+............ ....++..+|+++|-
T Consensus 89 ~~~~~-~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 89 APGIK-RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred ccCCc-eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 456 999999999999999987664331110 011267888888754
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-09 Score=85.03 Aligned_cols=90 Identities=17% Similarity=0.318 Sum_probs=53.0
Q ss_pred ceEEEecCCCC-CCCChHHHHHHHHhhhhccCCCCceE---EEEeCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh
Q 020518 45 STAFVLHGLLG-SGRNWRSFSRNLASTLSQTSASSEWR---MVLVDLRNHGRSAEIEGLD-PPHDIANAANDLANLVKAK 119 (325)
Q Consensus 45 ~~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~---vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~~l~~~l~~~ 119 (325)
.||||+||.++ ....|..+.+.|.+ +||. ++++++-....+....... ...+..++++-|.+++++.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~--------~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T 73 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKA--------AGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT 73 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHH--------TT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHH--------cCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh
Confidence 58999999998 66899999999998 9999 7999884333322111000 0111233444444444555
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+ . +|.||||||||.++..+....
T Consensus 74 G-a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 74 G-A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp T----EEEEEETCHHHHHHHHHHHC
T ss_pred C-C-EEEEEEcCCcCHHHHHHHHHc
Confidence 6 4 899999999999998888643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.8e-07 Score=71.12 Aligned_cols=217 Identities=13% Similarity=0.111 Sum_probs=124.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC----CCCCCCCC--------CCCCCCHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH----GRSAEIEG--------LDPPHDIANAAND 111 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~----G~S~~~~~--------~~~~~~~~~~~~~ 111 (325)
.-|.||+||.+++..+....+..|..... ..+.-=++.+|--|- |.=++... .....+..++...
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~---~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYK---AGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhccc---ccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 34789999999999999999988885220 001112445555551 11111110 0134566777888
Q ss_pred HHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc
Q 020518 112 LANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187 (325)
Q Consensus 112 l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (325)
+..++..| +++ .+.+|||||||.-...|+..+.. ......+.++|.++++.. .......
T Consensus 122 lk~~msyL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~---dks~P~lnK~V~l~gpfN-~~~l~~d------------ 184 (288)
T COG4814 122 LKKAMSYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGD---DKSLPPLNKLVSLAGPFN-VGNLVPD------------ 184 (288)
T ss_pred HHHHHHHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcC---CCCCcchhheEEeccccc-ccccCCC------------
Confidence 88877665 678 99999999999999999988754 112236899999997643 1000000
Q ss_pred CCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCC
Q 020518 188 LPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 267 (325)
+...+..... .. .. ......++. .....+..++-+++|.|+-
T Consensus 185 ---------------------e~v~~v~~~~-----~~---~~-~t~y~~y~~--------~n~k~v~~~~evl~IaGDl 226 (288)
T COG4814 185 ---------------------ETVTDVLKDG-----PG---LI-KTPYYDYIA--------KNYKKVSPNTEVLLIAGDL 226 (288)
T ss_pred ---------------------cchheeeccC-----cc---cc-CcHHHHHHH--------hcceeCCCCcEEEEEeccc
Confidence 0000000000 00 00 000000000 1123344557889999986
Q ss_pred C------CCCChHHHHHHHHHhhhcCCCCCCceeEEEec--CCCccccccChHHHHHHHHHHHh
Q 020518 268 S------DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLP--NAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 268 D------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
| ..+|...+-....++...++. ..-.+++ ++-|.-+.|+|. +++.+..||-
T Consensus 227 ~dg~~tDG~Vp~assls~~~lf~~~~ks----y~e~~~~Gk~a~Hs~lhen~~-v~~yv~~FLw 285 (288)
T COG4814 227 DDGKQTDGAVPWASSLSIYHLFKKNGKS----YIESLYKGKDARHSKLHENPT-VAKYVKNFLW 285 (288)
T ss_pred ccCCcCCCceechHhHHHHHHhccCcce----eEEEeeeCCcchhhccCCChh-HHHHHHHHhh
Confidence 6 456666666677777765442 3333454 478988888765 6667778874
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.6e-07 Score=72.10 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=85.6
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC---CCC---CCCCCCCHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA---EIE---GLDPPHDIANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~---~~~---~~~~~~~~~~~~~~l~~~ 115 (325)
.+++.+++++|.+|....|..+...|...+. +.++++.+-.-||-.-. ... .....+++++.++.=.++
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~-----~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLI-----DRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcc-----cccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 4588899999999999999999999886542 44678988888886543 111 112578999999999999
Q ss_pred HHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 116 VKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 116 l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+++.-+ +.+++++|||-|+++.+........ .-.|.+.+++-|.
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~------~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKL------VFSVQKAVLLFPT 146 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhccc------ccceEEEEEecch
Confidence 987743 3489999999999999998874322 1267888887765
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.5e-09 Score=88.08 Aligned_cols=114 Identities=19% Similarity=0.263 Sum_probs=64.7
Q ss_pred CCCCceEEEecCCCCCC--CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG--RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
+.++|++|++|||.++. ..|.. +...+.+.. +.++.||++|+...-...-.. .......+.+.|..+|.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~-----~~d~NVI~VDWs~~a~~~Y~~---a~~n~~~vg~~la~~l~ 139 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKD-----TGDYNVIVVDWSRGASNNYPQ---AVANTRLVGRQLAKFLS 139 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC-------S-EEEEEEE-HHHHSS-HHH---HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhc-----cCCceEEEEcchhhccccccc---hhhhHHHHHHHHHHHHH
Confidence 46789999999998877 45654 455454421 037999999995322110000 01122333444444443
Q ss_pred Hh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 118 AK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 118 ~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+ ..+ +++|||||+||.+|-.++..... ..+|.+++.+||+.+..
T Consensus 140 ~L~~~~g~~~~-~ihlIGhSLGAHvaG~aG~~~~~------~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 140 FLINNFGVPPE-NIHLIGHSLGAHVAGFAGKYLKG------GGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHH---GG-GEEEEEETCHHHHHHHHHHHTTT---------SSEEEEES-B-TTT
T ss_pred HHHhhcCCChh-HEEEEeeccchhhhhhhhhhccC------cceeeEEEecCcccccc
Confidence 32 346 89999999999999998887653 12799999999985443
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.5e-07 Score=86.85 Aligned_cols=223 Identities=16% Similarity=0.105 Sum_probs=135.8
Q ss_pred cccceEEEEcccCCCC--CCCceEEEecCCCCCC-------CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGSG-------RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 96 (325)
+|....+...-|+.-+ ..=|.||.+||.+++. -.|..+ .... .|+.|+.+|.||-|.....
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~--------~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSS--------RGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhcc--------CCeEEEEEcCCCcCCcchh
Confidence 6667777776664322 2336678889988733 233333 1233 7999999999998765432
Q ss_pred C-----CCCCCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 97 E-----GLDPPHDIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 97 ~-----~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
- ..-.....+++...+..+++..-++ .++.+.|+|.||.+++..+...|+ ..++..+.++|.....-
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~-------~~fkcgvavaPVtd~~~ 648 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPG-------DVFKCGVAVAPVTDWLY 648 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcC-------ceEEEEEEecceeeeee
Confidence 1 1013456777777777777765333 279999999999999999999985 13444488887643221
Q ss_pred CCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
...... + +++..... . ... |........
T Consensus 649 yds~~t--e---------------------------------rymg~p~~--~--------~~~-------y~e~~~~~~ 676 (755)
T KOG2100|consen 649 YDSTYT--E---------------------------------RYMGLPSE--N--------DKG-------YEESSVSSP 676 (755)
T ss_pred eccccc--H---------------------------------hhcCCCcc--c--------cch-------hhhccccch
Confidence 000000 0 00000000 0 000 111112222
Q ss_pred ccCCCCCCc-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-HHHHHHHHHHHh
Q 020518 251 LEHPPQGME-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-KGLLEIVAPRIA 323 (325)
Q Consensus 251 ~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~ 323 (325)
+..++ .| .|+|+|..|+.+..+....+.+.+...+. ..+..++|+.+|.+..-.. ..+...+..|+.
T Consensus 677 ~~~~~--~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv----~~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 677 ANNIK--TPKLLLIHGTEDDNVHFQQSAILIKALQNAGV----PFRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred hhhhc--cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC----ceEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 23333 23 49999999999998888777777766554 2899999999999876443 566667777765
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.1e-08 Score=83.98 Aligned_cols=140 Identities=19% Similarity=0.111 Sum_probs=86.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhc-----------cCCCCceEEEEeCCC-CCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ-----------TSASSEWRMVLVDLR-NHGRS 93 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~vi~~D~~-G~G~S 93 (325)
.+..++|.-+.......+.|.||++.|.++++..|..+.+ .....-+ .+-++..+++.+|.| |.|.|
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS 100 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFS 100 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCceEEeecccccccccccccccccceEEEeecCceEEe
Confidence 5678888888776666778999999999998887743322 1100000 011244689999955 99999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC--CccCCcceEEEEec
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG--QFVALPKQLWVLDS 164 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~--~~~~~v~~lvli~~ 164 (325)
..........+.++.++++..+|+.. .-. +++|.|.|+||..+-.+|.+--+.... .....++++++.++
T Consensus 101 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng 179 (415)
T PF00450_consen 101 YGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSN-PLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNG 179 (415)
T ss_dssp EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTS-EEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE
T ss_pred eccccccccchhhHHHHHHHHHHHHhhhhhhhccCC-CEEEEccccccccchhhHHhhhhccccccccccccccceecCc
Confidence 87654212457899999998888765 334 899999999999887777553221110 00135889998887
Q ss_pred CCC
Q 020518 165 VPG 167 (325)
Q Consensus 165 ~~~ 167 (325)
...
T Consensus 180 ~~d 182 (415)
T PF00450_consen 180 WID 182 (415)
T ss_dssp -SB
T ss_pred ccc
Confidence 643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.2e-07 Score=75.44 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=40.4
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC-CCCCCceeEEEecCCCccccc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG-DGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~ 308 (325)
++|+++.+|..|.++|+...+.+.+.....+ . +++++.+++.+|....
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a----~V~~~~~~~~~H~~~~ 267 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGA----DVEYVRYPGGGHLGAA 267 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC----CEEEEecCCCChhhhh
Confidence 5899999999999999988888877777766 3 3999999999998643
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.6e-07 Score=73.50 Aligned_cols=102 Identities=15% Similarity=0.139 Sum_probs=67.3
Q ss_pred CceEEEecCCC--CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 020518 44 TSTAFVLHGLL--GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA--- 118 (325)
Q Consensus 44 ~~~vv~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~--- 118 (325)
..|||+.||++ ++...+..+...+.+. .++.+..+. .|-+.. .+ ....+.+.++.+.+-+..
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~-------~~~pg~~v~-ig~~~~---~s--~~~~~~~Qv~~vce~l~~~~~ 92 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINH-------SGYPGTCVE-IGNGVQ---DS--LFMPLRQQASIACEKIKQMKE 92 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhC-------CCCCeEEEE-ECCCcc---cc--cccCHHHHHHHHHHHHhcchh
Confidence 56899999999 5555677777766521 355444444 232211 11 223455666655555543
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+. + -+++||+|-||.++-.++.+.|+ ...|+.+|.++++-
T Consensus 93 L~-~-G~naIGfSQGglflRa~ierc~~------~p~V~nlISlggph 132 (306)
T PLN02606 93 LS-E-GYNIVAESQGNLVARGLIEFCDN------APPVINYVSLGGPH 132 (306)
T ss_pred hc-C-ceEEEEEcchhHHHHHHHHHCCC------CCCcceEEEecCCc
Confidence 22 3 69999999999999999999976 01599999999763
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.7e-08 Score=78.37 Aligned_cols=95 Identities=20% Similarity=0.198 Sum_probs=66.3
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC--CCCCCCCCCC---CCCCHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH--GRSAEIEGLD---PPHDIANAANDLANLVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~--G~S~~~~~~~---~~~~~~~~~~~l~~~l~ 117 (325)
.-|.|++-||.++....|..+.+.+++ .||-|.++|.+|- |......... ...-+.+-..|+..+|+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs--------~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd 141 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLAS--------YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLD 141 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhh--------CceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHH
Confidence 468899999999999999999999998 8999999999994 3333221100 11112233333333332
Q ss_pred H-------------hCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 118 A-------------KGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 118 ~-------------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
. ++.. +|.++|||+||..++..+.-..+
T Consensus 142 ~L~~~~~sP~l~~~ld~~-~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 142 ALLQLTASPALAGRLDPQ-RVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HHHHhhcCcccccccCcc-ceEEEecccccHHHHHhcccccc
Confidence 2 2345 89999999999999999876544
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.4e-06 Score=70.93 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=57.8
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
.|+.|+.+.+. +.+. ...++++.+.....+++++ +.. +.+|+|.+-||+.++.+|+.+|+
T Consensus 99 ~GHPvYFV~F~----p~P~----pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd------ 163 (581)
T PF11339_consen 99 AGHPVYFVGFF----PEPE----PGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPD------ 163 (581)
T ss_pred cCCCeEEEEec----CCCC----CCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcC------
Confidence 79999988664 1111 5679999999888888766 234 89999999999999999999999
Q ss_pred cCCcceEEEEecCCC
Q 020518 153 VALPKQLWVLDSVPG 167 (325)
Q Consensus 153 ~~~v~~lvli~~~~~ 167 (325)
.+.-+|+-+++..
T Consensus 164 --~~gplvlaGaPls 176 (581)
T PF11339_consen 164 --LVGPLVLAGAPLS 176 (581)
T ss_pred --ccCceeecCCCcc
Confidence 8888887766543
|
Their function is unknown. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.8e-06 Score=69.42 Aligned_cols=234 Identities=16% Similarity=0.159 Sum_probs=123.5
Q ss_pred eEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--
Q 020518 46 TAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD-- 122 (325)
Q Consensus 46 ~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-- 122 (325)
|||++=||.+.. ....+......+ .|++++.+-.+-...... .-.+...++.+.+.+......
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~--------~g~~il~~~~~~~~~~~~------~~~~~~~~~~l~~~l~~~~~~~~ 66 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQD--------PGFDILLVTSPPADFFWP------SKRLAPAADKLLELLSDSQSASP 66 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHh--------cCCeEEEEeCCHHHHeee------ccchHHHHHHHHHHhhhhccCCC
Confidence 456666776544 444455555555 899999887653322211 134566667676666655433
Q ss_pred CCEEEEEeChhHHHHHHHHHH-ccc-cccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQS-CAR-ADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~-~p~-~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
.++++-..|.||...+..... +.+ ...+.-..+++++|+ |++|......... ..+...+ +...........
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~-DS~P~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~ 139 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIF-DSCPGIPTYSSSA---RAFSAAL---PKSSPRWFVPLW 139 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEE-eCCCCccccccHH---HHHHHHc---CccchhhHHHHH
Confidence 279999999988777665542 111 001111224777775 5444333221111 1111111 111000000000
Q ss_pred HHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
.+................. .. ........+ ......+..+|-++|++..|.+++.+.++...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~---------~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~ 201 (240)
T PF05705_consen 140 PLLQFLLRLSIISYFIFGY--PD-------VQEYYRRAL---------NDFANSPSRCPRLYLYSKADPLIPWRDVEEHA 201 (240)
T ss_pred HHHHHHHHHHHHHHHHhcC--Cc-------HHHHHHHHH---------hhhhcCCCCCCeEEecCCCCcCcCHHHHHHHH
Confidence 0000000000000000000 00 001111111 12222333478999999999999999998888
Q ss_pred HHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHH
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRI 322 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 322 (325)
+...+.+. +++...++++.|..|+ ++|++..+.+.+|+
T Consensus 202 ~~~~~~G~----~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 202 EEARRKGW----DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred HHHHHcCC----eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 88877554 3888999999999998 58999999999985
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.8e-07 Score=71.44 Aligned_cols=121 Identities=14% Similarity=0.055 Sum_probs=74.7
Q ss_pred ccccceEEEEcccCCCC--CCC-ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC---CCCC---
Q 020518 25 RSLQTLAYEEVRSSSDR--PYT-STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG---RSAE--- 95 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~--~~~-~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G---~S~~--- 95 (325)
..|..|.|+-+.+..-+ ..- |.|||+||.+..+..-... +. .|..-++.+.|-.+ .+..
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~---l~---------sg~gaiawa~pedqcfVlAPQy~~ 236 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV---LS---------SGIGAIAWAGPEDQCFVLAPQYNP 236 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh---hh---------cCccceeeecccCceEEEcccccc
Confidence 45889999998874322 223 7899999999877654332 22 34444444444443 1110
Q ss_pred -CCCCC--CCCCHHHHHHHHH-HHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 96 -IEGLD--PPHDIANAANDLA-NLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 96 -~~~~~--~~~~~~~~~~~l~-~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
-.+.+ ...-.....+.+. .+.++.+++ .+++++|.|+||+-++.++.++|+ .+.+.+++++.
T Consensus 237 if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--------fFAaa~~iaG~ 303 (387)
T COG4099 237 IFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--------FFAAAVPIAGG 303 (387)
T ss_pred cccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--------hhheeeeecCC
Confidence 00000 1112333344444 233344443 279999999999999999999999 99999999875
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.2e-08 Score=77.17 Aligned_cols=107 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred CCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS-AEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
+..|||+.||++.+. ..+..+...+.+.. .|--|.+++. |-+.+ +...+ ..-.+.+.++.+.+.++.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~------PG~yV~si~i-g~~~~~D~~~s--~f~~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQH------PGTYVHSIEI-GNDPSEDVENS--FFGNVNDQVEQVCEQLAN 74 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHS------TT--EEE--S-SSSHHHHHHHH--HHSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhC------CCceEEEEEE-CCCcchhhhhh--HHHHHHHHHHHHHHHHhh
Confidence 467899999999864 35666766666655 7888888887 32221 11100 123455666666666654
Q ss_pred hC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 119 KG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 119 ~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.. +..-++++|+|-||.++-.++.++|+ ..|+.+|.++++
T Consensus 75 ~p~L~~G~~~IGfSQGgl~lRa~vq~c~~-------~~V~nlISlggp 115 (279)
T PF02089_consen 75 DPELANGFNAIGFSQGGLFLRAYVQRCND-------PPVHNLISLGGP 115 (279)
T ss_dssp -GGGTT-EEEEEETCHHHHHHHHHHH-TS-------S-EEEEEEES--
T ss_pred ChhhhcceeeeeeccccHHHHHHHHHCCC-------CCceeEEEecCc
Confidence 21 22279999999999999999999986 379999999976
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.3e-07 Score=71.96 Aligned_cols=126 Identities=20% Similarity=0.114 Sum_probs=88.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH--HHHHhhhhccCCCCceEEEEeCC-C------CCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS--RNLASTLSQTSASSEWRMVLVDL-R------NHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~vi~~D~-~------G~G~S~~~ 96 (325)
++.+..|..+.+.....+.|.||.+||-.++........ +.|++. .||-|+.+|- + +.+.+..+
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~-------~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR-------EGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc-------cCcEEECcCccccccCCCcccccCCc
Confidence 677888888888766666788999999999886665543 556654 7899999852 2 22333222
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 97 EG-LDPPHDIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 97 ~~-~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.. .....+...+++.+..++.+.+++ .+|++.|.|-||.++..+++.+|+ .+.++.++++..
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--------~faa~A~VAg~~ 179 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--------IFAAIAPVAGLL 179 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--------cccceeeeeccc
Confidence 21 001223334444555555566654 379999999999999999999999 899998888765
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-06 Score=70.56 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=68.5
Q ss_pred CceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Q 020518 44 TSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG- 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~- 120 (325)
..|+|+.||+|++... ...+...+ +.. .|..+.++.. |.+.. .+ ....+.+.++.+.+-+....
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~-~~~------~g~~~~~i~i---g~~~~-~s--~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLL-TNL------SGSPGFCLEI---GNGVG-DS--WLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHH-HhC------CCCceEEEEE---CCCcc-cc--ceeCHHHHHHHHHHHHhhchh
Confidence 5689999999987653 33444444 323 5667766654 33321 11 34456666666665554421
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
...-+++||+|-||.++-.++.+.|+ ...|+.+|.++++
T Consensus 92 l~~G~naIGfSQGGlflRa~ierc~~------~p~V~nlISlggp 130 (314)
T PLN02633 92 LSQGYNIVGRSQGNLVARGLIEFCDG------GPPVYNYISLAGP 130 (314)
T ss_pred hhCcEEEEEEccchHHHHHHHHHCCC------CCCcceEEEecCC
Confidence 11269999999999999999999986 0159999999976
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-07 Score=79.31 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=81.1
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceE---EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR---MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
..+++++||++.+...|..+...+.. .|+. ++.+++++- ....+ .....+++...+.+++...+
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~-~~~~~----~~~~~~ql~~~V~~~l~~~g 125 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAI--------LGWLTNGVYAFELSGG-DGTYS----LAVRGEQLFAYVDEVLAKTG 125 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcc--------hHHHhccccccccccc-CCCcc----ccccHHHHHHHHHHHHhhcC
Confidence 55899999998888999888777665 5666 888888866 11111 34566777777888888888
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+ ++.++||||||.++..++...+.. .+|+.++.++++-
T Consensus 126 a~-~v~LigHS~GG~~~ry~~~~~~~~------~~V~~~~tl~tp~ 164 (336)
T COG1075 126 AK-KVNLIGHSMGGLDSRYYLGVLGGA------NRVASVVTLGTPH 164 (336)
T ss_pred CC-ceEEEeecccchhhHHHHhhcCcc------ceEEEEEEeccCC
Confidence 88 999999999999999999998831 1899999999864
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.6e-08 Score=76.09 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=52.8
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAND----LANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~----l~~~l~~ 118 (325)
..-.|||+||+.++...|..+...+.... +.+.--.+...++...... ....++..++. |.+.++.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~------~~~~~~~i~~~~~~~n~~~----T~~gI~~~g~rL~~eI~~~~~~ 72 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIP------EDLPNARIVVLGYSNNEFK----TFDGIDVCGERLAEEILEHIKD 72 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhh------hhcchhhhhhhcccccccc----cchhhHHHHHHHHHHHHHhccc
Confidence 35679999999999999988877776511 1222112222222211111 22344444444 4444443
Q ss_pred hCCC-CCEEEEEeChhHHHHHHHHHH
Q 020518 119 KGWD-WPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 119 ~~~~-~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
.... .++++|||||||.++-.+...
T Consensus 73 ~~~~~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 73 YESKIRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccccccceEEEecccHHHHHHHHHH
Confidence 3322 389999999999998766553
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2e-06 Score=65.11 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=74.5
Q ss_pred CceEEEecCCCCCCC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+--|||+-|++..-. .-..+...|.+ .+|.++-+.++.+-.-. ...++++.++|+..++++++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde--------~~wslVq~q~~Ssy~G~------Gt~slk~D~edl~~l~~Hi~ 101 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDE--------NSWSLVQPQLRSSYNGY------GTFSLKDDVEDLKCLLEHIQ 101 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhh--------ccceeeeeecccccccc------ccccccccHHHHHHHHHHhh
Confidence 456899999988553 33456667776 88999988876322111 35678899999999999875
Q ss_pred CC---CCEEEEEeChhHHHHHHHHHH--ccccccCCccCCcceEEEEecCCC
Q 020518 121 WD---WPDVVIGHSMGGKVALHFAQS--CARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 121 ~~---~~~~lvGhS~Gg~~a~~~a~~--~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.. ..++|+|||.|+.-.+.|... .|. .+...|+.+|...
T Consensus 102 ~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r--------~iraaIlqApVSD 145 (299)
T KOG4840|consen 102 LCGFSTDVVLVGHSTGCQDIMYYLTNTTKDR--------KIRAAILQAPVSD 145 (299)
T ss_pred ccCcccceEEEecCccchHHHHHHHhccchH--------HHHHHHHhCccch
Confidence 43 279999999999999998833 233 6777777777643
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-05 Score=68.66 Aligned_cols=121 Identities=17% Similarity=0.077 Sum_probs=70.7
Q ss_pred eEEEEcccCCC-CCCCceEEEecCCCCCCC-ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCCCCCCCCCCHH
Q 020518 30 LAYEEVRSSSD-RPYTSTAFVLHGLLGSGR-NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPPHDIA 106 (325)
Q Consensus 30 l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~~~~~~~~~~~ 106 (325)
..+..|.++.. ....|.|+++||-..... .....++.|.+. +.....-++.+|..+.. ++..... ...-.+
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~----g~i~P~ivV~id~~~~~~R~~el~~--~~~f~~ 267 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHR----GQLPPAVYLLIDAIDTTHRSQELPC--NADFWL 267 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHc----CCCCceEEEEECCCCcccccccCCc--hHHHHH
Confidence 34444444321 234688999999643221 122344444431 00122446777753211 1111110 111234
Q ss_pred HHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 107 NAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 107 ~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.++++|.-++++. +.+ +.+|+|+||||..|+.++.++|+ ++.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~-~~~IaG~S~GGl~AL~~al~~Pd--------~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDAD-RTVVAGQSFGGLAALYAGLHWPE--------RFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCcc-ceEEEEEChHHHHHHHHHHhCcc--------cccEEEEeccc
Confidence 4567777777764 234 68999999999999999999999 99999999975
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.6e-06 Score=64.63 Aligned_cols=99 Identities=20% Similarity=0.217 Sum_probs=73.9
Q ss_pred ceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 45 STAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHG--RSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
-|+|++||++++..+ ...+.+.+.+ . .|..|+++|. |-| .| ....+.+.++...+.+...
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~-~------~g~~v~~lei-g~g~~~s-------~l~pl~~Qv~~~ce~v~~m~ 88 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEE-L------PGSPVYCLEI-GDGIKDS-------SLMPLWEQVDVACEKVKQMP 88 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHh-C------CCCeeEEEEe-cCCcchh-------hhccHHHHHHHHHHHHhcch
Confidence 689999999998877 7778877777 3 8899999996 555 22 2334555665555555422
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
....-++++|.|-||.++-.++...++ ..|+.+|.++++
T Consensus 89 ~lsqGynivg~SQGglv~Raliq~cd~-------ppV~n~ISL~gP 127 (296)
T KOG2541|consen 89 ELSQGYNIVGYSQGGLVARALIQFCDN-------PPVKNFISLGGP 127 (296)
T ss_pred hccCceEEEEEccccHHHHHHHHhCCC-------CCcceeEeccCC
Confidence 122279999999999999999999877 479999998876
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-06 Score=69.63 Aligned_cols=107 Identities=20% Similarity=0.251 Sum_probs=71.7
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC------C-CCC-----------C--C
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE------I-EGL-----------D--P 101 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~------~-~~~-----------~--~ 101 (325)
+.-|.|||-||++++...|..++-.|+. .||-|.++..|-+-.+.. + .+. . .
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAS--------hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~e 187 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLAS--------HGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANE 187 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhh--------CceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCc
Confidence 3458899999999999999999999998 899999999987643321 0 000 0 0
Q ss_pred C-C-----CHHHHHHHHH---HHHHHh------------------------CCCCCEEEEEeChhHHHHHHHHHHccccc
Q 020518 102 P-H-----DIANAANDLA---NLVKAK------------------------GWDWPDVVIGHSMGGKVALHFAQSCARAD 148 (325)
Q Consensus 102 ~-~-----~~~~~~~~l~---~~l~~~------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~ 148 (325)
. . .+-.-++.+. .+|+++ .-. ++.++|||+||+.++.....+.
T Consensus 188 kef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s-~~aViGHSFGgAT~i~~ss~~t--- 263 (399)
T KOG3847|consen 188 KEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTS-QAAVIGHSFGGATSIASSSSHT--- 263 (399)
T ss_pred eeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhh-hhhheeccccchhhhhhhcccc---
Confidence 0 0 0111122222 222222 122 6899999999999998888765
Q ss_pred cCCccCCcceEEEEecCC
Q 020518 149 YGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 149 ~~~~~~~v~~lvli~~~~ 166 (325)
.++..|++|.+.
T Consensus 264 ------~FrcaI~lD~WM 275 (399)
T KOG3847|consen 264 ------DFRCAIALDAWM 275 (399)
T ss_pred ------ceeeeeeeeeee
Confidence 489999999764
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.3e-05 Score=62.48 Aligned_cols=112 Identities=14% Similarity=0.204 Sum_probs=72.0
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC--CCCCC--------------CCCCCCC---
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH--GRSAE--------------IEGLDPP--- 102 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~--G~S~~--------------~~~~~~~--- 102 (325)
.....||++||.+.+. .|..++..|...+.+ .||..+++.+|.- ..... .......
T Consensus 85 ~~~G~vIilp~~g~~~-d~p~~i~~LR~~L~~----~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~ 159 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHP-DWPGLIAPLRRELPD----HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPS 159 (310)
T ss_pred CCceEEEEecCCCCCC-CcHhHHHHHHHHhhh----cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCc
Confidence 3466899999998866 566666666655544 8999999998871 10000 0000000
Q ss_pred -------CCHHHH----HHH---HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 103 -------HDIANA----AND---LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 103 -------~~~~~~----~~~---l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.....+ ..- +.+++...+.. +++||||+.|+..++.|....+. ..+.++|+|++-.
T Consensus 160 ~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~-------~~~daLV~I~a~~ 229 (310)
T PF12048_consen 160 PASAQEAEAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPP-------PMPDALVLINAYW 229 (310)
T ss_pred cccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCC-------cccCeEEEEeCCC
Confidence 111122 222 23333344545 69999999999999999999876 3589999999753
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.1e-06 Score=71.26 Aligned_cols=90 Identities=17% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCceEEEecCCCCCCCCh------HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNW------RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~ 115 (325)
.+...+++.-|.++.-+.. ...+..+++. .+-+|+.+++||.|.|.... +.++++.|..+.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~-------~~aNvl~fNYpGVg~S~G~~------s~~dLv~~~~a~ 201 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE-------LGANVLVFNYPGVGSSTGPP------SRKDLVKDYQAC 201 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH-------cCCcEEEECCCccccCCCCC------CHHHHHHHHHHH
Confidence 4577899999988866551 1234444443 57799999999999998753 468888887777
Q ss_pred HHHh-----C--CCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 116 VKAK-----G--WDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 116 l~~~-----~--~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
++.+ | .+ .+++.|||+||.++..++.++.
T Consensus 202 v~yL~d~~~G~ka~-~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 202 VRYLRDEEQGPKAK-NIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHhcccCCChh-eEEEeeccccHHHHHHHHHhcc
Confidence 7665 2 24 7999999999999998776654
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1e-06 Score=71.07 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=71.5
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL-VKAKGW 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~-l~~~~~ 121 (325)
....|||+-|..+-.+. .++..-.+ .||.|+.+++||++.|...+. ...-.+.++.+.++ ++.++.
T Consensus 242 gq~LvIC~EGNAGFYEv--G~m~tP~~--------lgYsvLGwNhPGFagSTG~P~---p~n~~nA~DaVvQfAI~~Lgf 308 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEV--GVMNTPAQ--------LGYSVLGWNHPGFAGSTGLPY---PVNTLNAADAVVQFAIQVLGF 308 (517)
T ss_pred CceEEEEecCCccceEe--eeecChHH--------hCceeeccCCCCccccCCCCC---cccchHHHHHHHHHHHHHcCC
Confidence 35567788776653321 12222222 799999999999999998763 34444445554444 566664
Q ss_pred C-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 122 D-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 122 ~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
. ..+++.|||.||..++.+|..||+ |+++||-++.
T Consensus 309 ~~edIilygWSIGGF~~~waAs~YPd---------VkavvLDAtF 344 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVAWAASNYPD---------VKAVVLDATF 344 (517)
T ss_pred CccceEEEEeecCCchHHHHhhcCCC---------ceEEEeecch
Confidence 2 279999999999999999999997 9999987665
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.8e-05 Score=56.32 Aligned_cols=80 Identities=26% Similarity=0.387 Sum_probs=60.7
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
||.+|||.+|..+.+... +.+. +..|.|-.+.|.+. ...+....++.+..++.+.+-+ ...
T Consensus 2 ilYlHGFnSSP~shka~l--~~q~------------~~~~~~~i~y~~p~----l~h~p~~a~~ele~~i~~~~~~-~p~ 62 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LLQF------------IDEDVRDIEYSTPH----LPHDPQQALKELEKAVQELGDE-SPL 62 (191)
T ss_pred eEEEecCCCCcccHHHHH--HHHH------------HhccccceeeecCC----CCCCHHHHHHHHHHHHHHcCCC-Cce
Confidence 899999999888887643 1211 22233444444433 3568899999999999999977 799
Q ss_pred EEEeChhHHHHHHHHHHcc
Q 020518 127 VIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p 145 (325)
+||-|+||..|.+++.++.
T Consensus 63 ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 63 IVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred EEeecchHHHHHHHHHHhC
Confidence 9999999999999999874
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.41 E-value=2e-05 Score=68.93 Aligned_cols=228 Identities=14% Similarity=0.122 Sum_probs=130.6
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCC---CChHH--H--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSG---RNWRS--F--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~---~~~~~--~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
+.|.+++-..+.+.. +...-|+++++=|.++-. ..|.. . ...|+. .||-|+.+|-||......
T Consensus 621 ~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Las--------lGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLAS--------LGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhh--------cceEEEEEcCCCccccch
Confidence 445555544554432 123458899999998733 22321 1 234454 899999999999765533
Q ss_pred CCC-----CCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 96 IEG-----LDPPHDIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 96 ~~~-----~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.-+ .-....++|.++-+.-+.++.| .+ ++.+.|||.||.+++....++|+ -++..|.=+|...
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmd-rV~vhGWSYGGYLSlm~L~~~P~--------IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMD-RVGVHGWSYGGYLSLMGLAQYPN--------IFRVAIAGAPVTD 763 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccch-heeEeccccccHHHHHHhhcCcc--------eeeEEeccCccee
Confidence 211 0034568899999999998874 57 89999999999999999999998 4444333222211
Q ss_pred CCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
....... ..+..+.. ++ .+. ..+..........
T Consensus 764 W~~YDTg-----------------------YTERYMg~--P~-------------~nE--~gY~agSV~~~Ve------- 796 (867)
T KOG2281|consen 764 WRLYDTG-----------------------YTERYMGY--PD-------------NNE--HGYGAGSVAGHVE------- 796 (867)
T ss_pred eeeeccc-----------------------chhhhcCC--Cc-------------cch--hcccchhHHHHHh-------
Confidence 0000000 00000000 00 000 0000000111111
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
.+..-+ -..++|+|--|.-+--.....+...+-+.++ .-++.++|+--|.+-- |.-+-....|..||+.
T Consensus 797 --klpdep--nRLlLvHGliDENVHF~Hts~Lvs~lvkagK----pyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 797 --KLPDEP--NRLLLVHGLIDENVHFAHTSRLVSALVKAGK----PYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred --hCCCCC--ceEEEEecccccchhhhhHHHHHHHHHhCCC----ceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 111111 2358999999987766555555555544444 3899999999998754 4456677788888864
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.4e-05 Score=57.67 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=54.2
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceE-EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR-MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
+..|||+.||+.+...+..+.. . .++. ++++|+|..- ++. + + .+.+
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~---------~~~D~l~~yDYr~l~-------------~d~---~----~--~~y~ 57 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--P---------ENYDVLICYDYRDLD-------------FDF---D----L--SGYR 57 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--C---------CCccEEEEecCcccc-------------ccc---c----c--ccCc
Confidence 5689999999998877765431 1 3444 4567876221 110 1 1 1346
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.++|||+|||-++|..+.... .+++-|.|++.+.+.
T Consensus 58 -~i~lvAWSmGVw~A~~~l~~~----------~~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 58 -EIYLVAWSMGVWAANRVLQGI----------PFKRAIAINGTPYPI 93 (213)
T ss_pred -eEEEEEEeHHHHHHHHHhccC----------CcceeEEEECCCCCc
Confidence 999999999999998876543 467777788776544
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00077 Score=58.38 Aligned_cols=140 Identities=14% Similarity=0.030 Sum_probs=86.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccC----------CCCceEEEEeCCC-CCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTS----------ASSEWRMVLVDLR-NHGRS 93 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~vi~~D~~-G~G~S 93 (325)
..+..|+|.-+.+..+..++|.||.+.|.++.+..- .+..++....-+.+ =++--.++.+|.| |-|.|
T Consensus 54 ~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFS 132 (454)
T KOG1282|consen 54 SEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFS 132 (454)
T ss_pred CCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcc
Confidence 357889999887765556789999999999977554 33333321111000 0233468889977 88888
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC--CccCCcceEEEEec
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG--QFVALPKQLWVLDS 164 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~--~~~~~v~~lvli~~ 164 (325)
......+...+-+..|+|...+|.+. .-+ +++|.|-|.+|...-.+|.+--+.... .....++++++=++
T Consensus 133 Ys~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~-~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 133 YSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSN-DFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred ccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCC-CeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCc
Confidence 75543212345556667766666533 334 899999999998888777664332211 11125677777665
Q ss_pred CC
Q 020518 165 VP 166 (325)
Q Consensus 165 ~~ 166 (325)
..
T Consensus 212 ~t 213 (454)
T KOG1282|consen 212 LT 213 (454)
T ss_pred cc
Confidence 53
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=7.2e-06 Score=71.79 Aligned_cols=127 Identities=18% Similarity=0.086 Sum_probs=90.9
Q ss_pred CccccccceEEEEcccCCCCCCCceEEEecCCCCCCC---Ch--HHHHH---HHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 22 PTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR---NW--RSFSR---NLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 22 ~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~---~~--~~~~~---~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
..++||.+|+-..|.+... ...|+++..+-++-... .+ ....+ .++. .||.|+..|.||.|.|
T Consensus 24 V~MRDGvrL~~dIy~Pa~~-g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa--------~GYavV~qDvRG~~~S 94 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGA-GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAA--------QGYAVVNQDVRGRGGS 94 (563)
T ss_pred EEecCCeEEEEEEEccCCC-CCCceeEEeeccccccccccCcchhhcccccceeec--------CceEEEEecccccccC
Confidence 3568999999999987533 55788888883333222 11 11122 2344 8999999999999999
Q ss_pred CCCCCCCCCCC-HHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 94 AEIEGLDPPHD-IANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..... ..++ -.+..-|+.+++.+.-. +++|..+|-|++|...+.+|+..|. .++.++...+...
T Consensus 95 eG~~~--~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--------aLkai~p~~~~~D 160 (563)
T COG2936 95 EGVFD--PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--------ALKAIAPTEGLVD 160 (563)
T ss_pred Ccccc--eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--------hheeecccccccc
Confidence 98764 3344 34445567777766533 3489999999999999999999887 7888888776644
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.1e-06 Score=66.81 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=65.7
Q ss_pred CCCceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG--LDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~~~l~~~l~~ 118 (325)
..+..+||+||+..+-.. -...+.-... . ......+.+.+|..|.--...- ....++-..+..-|..+.+.
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d-~-----g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~ 187 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHD-S-----GNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATD 187 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhh-c-----CCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhC
Confidence 467889999999875432 1222222222 1 0455778888987775332211 00233344444444444444
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
...+ +++|++||||.+++++...+---+.......+++-+||-+|-
T Consensus 188 ~~~~-~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 188 KPVK-RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred CCCc-eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 4566 899999999999999887553211111011266777776643
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.9e-05 Score=66.74 Aligned_cols=163 Identities=16% Similarity=0.114 Sum_probs=100.8
Q ss_pred CCceEEEecCCCC--CCCChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 020518 43 YTSTAFVLHGLLG--SGRNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA- 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~--~~~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~- 118 (325)
..|.++++||.+. ....|.. +...|.-.. +-..+-++|++.-- ....+..-++.+..+...
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~g------evvev~tfdl~n~i---------gG~nI~h~ae~~vSf~r~k 239 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKG------EVVEVPTFDLNNPI---------GGANIKHAAEYSVSFDRYK 239 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhc------eeeeeccccccCCC---------CCcchHHHHHHHHHHhhhh
Confidence 4678899999982 2223322 223333211 33456677765211 124555666666665552
Q ss_pred -------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 020518 119 -------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191 (325)
Q Consensus 119 -------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (325)
+... +++|+|.|||+.++.+......+ .-|.++|.++-+........
T Consensus 240 vlei~gefpha-~IiLvGrsmGAlVachVSpsnsd-------v~V~~vVCigypl~~vdgpr------------------ 293 (784)
T KOG3253|consen 240 VLEITGEFPHA-PIILVGRSMGALVACHVSPSNSD-------VEVDAVVCIGYPLDTVDGPR------------------ 293 (784)
T ss_pred hhhhhccCCCC-ceEEEecccCceeeEEeccccCC-------ceEEEEEEecccccCCCccc------------------
Confidence 2234 89999999999988888876654 24788887774432211000
Q ss_pred CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
. ...+.+..+ +.|+|+|.|..|..+
T Consensus 294 -------------------------------------------------g----irDE~Lldm--k~PVLFV~Gsnd~mc 318 (784)
T KOG3253|consen 294 -------------------------------------------------G----IRDEALLDM--KQPVLFVIGSNDHMC 318 (784)
T ss_pred -------------------------------------------------C----CcchhhHhc--CCceEEEecCCcccC
Confidence 0 000111222 279999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
++...+.+++.... ..+++++.+++|.+-.
T Consensus 319 spn~ME~vreKMqA-------~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 319 SPNSMEEVREKMQA-------EVELHVIGGADHSMAI 348 (784)
T ss_pred CHHHHHHHHHHhhc-------cceEEEecCCCccccC
Confidence 99888888776654 2889999999998765
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.5e-06 Score=66.75 Aligned_cols=53 Identities=25% Similarity=0.227 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhC-CCC-CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 106 ANAANDLANLVKAKG-WDW-PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~-~~~-~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+-+.++|..+|++.- ... +..|+|+||||..|+.++.++|+ .+.+++.+++..
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--------~F~~~~~~S~~~ 150 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--------LFGAVIAFSGAL 150 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--------TESEEEEESEES
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--------ccccccccCccc
Confidence 345567777777652 221 37999999999999999999999 999999999764
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.6e-05 Score=58.76 Aligned_cols=127 Identities=17% Similarity=0.136 Sum_probs=78.1
Q ss_pred cccceEEEEcccCCCCC--CCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCC--CCCCCCCCCCC-
Q 020518 26 SLQTLAYEEVRSSSDRP--YTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDL--RNHGRSAEIEG- 98 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~--~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~--~G~G~S~~~~~- 98 (325)
-.+.+.+-.+-++.... .-|+|.++-|+.++.+.|.. .....+.. .|+.|+++|- ||.--...+..
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~-------hgl~vV~PDTSPRG~~v~g~~esw 96 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASK-------HGLAVVAPDTSPRGVEVAGDDESW 96 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhh-------cCeEEECCCCCCCccccCCCcccc
Confidence 35667777666543222 24889999999999988753 22222221 6889999984 44321111100
Q ss_pred -CC---------------CCCCHH-HHHHHHHHHHHH----hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcc
Q 020518 99 -LD---------------PPHDIA-NAANDLANLVKA----KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157 (325)
Q Consensus 99 -~~---------------~~~~~~-~~~~~l~~~l~~----~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~ 157 (325)
+. ..|.+- -+++.+-+++.. ++.. ++.+.||||||.=|+..+++.|. +.+
T Consensus 97 DFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~-k~~IfGHSMGGhGAl~~~Lkn~~--------kyk 167 (283)
T KOG3101|consen 97 DFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPL-KVGIFGHSMGGHGALTIYLKNPS--------KYK 167 (283)
T ss_pred cccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccch-hcceeccccCCCceEEEEEcCcc--------ccc
Confidence 00 112222 234455555542 2345 78999999999999999999998 888
Q ss_pred eEEEEecCCCC
Q 020518 158 QLWVLDSVPGK 168 (325)
Q Consensus 158 ~lvli~~~~~~ 168 (325)
++-..+|...+
T Consensus 168 SvSAFAPI~NP 178 (283)
T KOG3101|consen 168 SVSAFAPICNP 178 (283)
T ss_pred ceeccccccCc
Confidence 87776665433
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.8e-05 Score=62.79 Aligned_cols=115 Identities=20% Similarity=0.200 Sum_probs=79.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHH---HhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNL---ASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
+.|.||++||.|-.-......+..| ...+ ....++++|+.-...-.... ..+..+.+.++-...+++..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l------~~~SILvLDYsLt~~~~~~~--~yPtQL~qlv~~Y~~Lv~~~ 192 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL------PEVSILVLDYSLTSSDEHGH--KYPTQLRQLVATYDYLVESE 192 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc------CCCeEEEEeccccccccCCC--cCchHHHHHHHHHHHHHhcc
Confidence 4699999999987665554443333 3333 45588888886543111111 15677888999999999888
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
|.+ +++|+|-|.||.+++.+.+...+.. .....+++|+++|+....
T Consensus 193 G~~-nI~LmGDSAGGnL~Ls~LqyL~~~~---~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 GNK-NIILMGDSAGGNLALSFLQYLKKPN---KLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCC-eEEEEecCccHHHHHHHHHHHhhcC---CCCCCceeEEECCCcCCc
Confidence 888 9999999999999998876532200 112578999999986554
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00015 Score=56.74 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=46.3
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc-cccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV-HVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 324 (325)
+.++.+.+|.+++......+++..++ +++..+++ ||.. .+-+-+.+-..|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg--------~eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG--------CEVRYLEG-GHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC--------CEEEEeec-CceeeeehhchHHHHHHHHHHHh
Confidence 57788999999998888888888887 99999995 9974 446778999999888865
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.002 Score=54.35 Aligned_cols=159 Identities=15% Similarity=0.130 Sum_probs=96.6
Q ss_pred HHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc
Q 020518 111 DLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187 (325)
Q Consensus 111 ~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (325)
.+.+++++. .++ +++|.|.|==|..++..|+- .. ||++++-+.-... .....+....+.+.
T Consensus 158 ~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWltaa~-D~--------RV~aivP~Vid~L-----N~~~~l~h~y~~yG- 221 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTAAV-DP--------RVKAIVPIVIDVL-----NMKANLEHQYRSYG- 221 (367)
T ss_pred HHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhhcc-Cc--------ceeEEeeEEEccC-----CcHHHHHHHHHHhC-
Confidence 345555555 677 99999999999999999994 44 8999886664321 11222222222222
Q ss_pred CCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCC
Q 020518 188 LPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 267 (325)
..+...+.++....+.... +-..+..+........+. +++. +|.++|.|..
T Consensus 222 -----------------~~ws~a~~dY~~~gi~~~l-------~tp~f~~L~~ivDP~~Y~---~rL~--~PK~ii~atg 272 (367)
T PF10142_consen 222 -----------------GNWSFAFQDYYNEGITQQL-------DTPEFDKLMQIVDPYSYR---DRLT--MPKYIINATG 272 (367)
T ss_pred -----------------CCCccchhhhhHhCchhhc-------CCHHHHHHHHhcCHHHHH---HhcC--ccEEEEecCC
Confidence 1223333333333322111 122233333332222222 3333 7999999999
Q ss_pred CCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 268 SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 268 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+++.|+........+++ ...+..+|+++|..-. ..+.+.|..|+.+
T Consensus 273 DeFf~pD~~~~y~d~L~G-------~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 273 DEFFVPDSSNFYYDKLPG-------EKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred CceeccCchHHHHhhCCC-------CeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 999999887666665554 2789999999998876 6677778888764
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0012 Score=55.64 Aligned_cols=47 Identities=11% Similarity=0.098 Sum_probs=34.3
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEe
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVL 299 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
........++-.+..|+..|+..|.+.-+.+.+.+..++=. +++..+
T Consensus 285 ~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfd----a~l~lI 331 (403)
T PF11144_consen 285 KIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFD----ATLHLI 331 (403)
T ss_pred HHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCC----eEEEEe
Confidence 33333433345577899999999999888888888877653 788777
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.2e-05 Score=67.23 Aligned_cols=107 Identities=23% Similarity=0.299 Sum_probs=69.4
Q ss_pred CceEEEecCCCCCCCC-h--HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRN-W--RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD----PPHDIANAANDLANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~-~--~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~l~~~l 116 (325)
+|.+|++-| -+.... | ..++..|++.+ |--++++.+|-+|.|.+..... ...+.++..+|+..++
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~-------~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~ 100 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEF-------GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFI 100 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHH-------TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHc-------CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHH
Confidence 565555544 343322 2 23566677664 5589999999999998654211 4568999999999998
Q ss_pred HHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+. .+.|++++|-|.||++|..+-.+||+ .|.+.+.-+++.
T Consensus 101 ~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--------~~~ga~ASSapv 148 (434)
T PF05577_consen 101 RYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--------LFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--------T-SEEEEET--C
T ss_pred HHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--------eeEEEEecccee
Confidence 7653 23489999999999999999999999 888887766553
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.9e-05 Score=64.53 Aligned_cols=85 Identities=22% Similarity=0.240 Sum_probs=57.8
Q ss_pred ChHHHHHHHHhhhhccCCCCceE------EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEE
Q 020518 59 NWRSFSRNLASTLSQTSASSEWR------MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK---GWDWPDVVIG 129 (325)
Q Consensus 59 ~~~~~~~~l~~~~~~~~~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvG 129 (325)
.|..+++.|.+ .||. ..-+|+|-- ....+++...+..++++. . .++++|||
T Consensus 66 ~~~~li~~L~~--------~GY~~~~~l~~~pYDWR~~-----------~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~ 125 (389)
T PF02450_consen 66 YFAKLIENLEK--------LGYDRGKDLFAAPYDWRLS-----------PAERDEYFTKLKQLIEEAYKKN-GKKVVLIA 125 (389)
T ss_pred hHHHHHHHHHh--------cCcccCCEEEEEeechhhc-----------hhhHHHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 78899999986 5554 222677611 113446666666666543 3 34999999
Q ss_pred eChhHHHHHHHHHHccccc-cCCccCCcceEEEEecCC
Q 020518 130 HSMGGKVALHFAQSCARAD-YGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 130 hS~Gg~~a~~~a~~~p~~~-~~~~~~~v~~lvli~~~~ 166 (325)
|||||.++..+....+... . ...|+++|.++++.
T Consensus 126 HSmGgl~~~~fl~~~~~~~W~---~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 126 HSMGGLVARYFLQWMPQEEWK---DKYIKRFISIGTPF 160 (389)
T ss_pred eCCCchHHHHHHHhccchhhH---HhhhhEEEEeCCCC
Confidence 9999999999998886510 0 02699999999764
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0001 Score=66.01 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=65.7
Q ss_pred CCCceEEEecCCCCC---CCChHHHHHHHHhhhhccCCCC-ceEEEEeCCC----CCCCCCCCCCCCCCCCHHHH---HH
Q 020518 42 PYTSTAFVLHGLLGS---GRNWRSFSRNLASTLSQTSASS-EWRMVLVDLR----NHGRSAEIEGLDPPHDIANA---AN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~---~~~~~~~~~~l~~~~~~~~~~~-~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~~ 110 (325)
+..|.||++||.+.. ...+ ....|... . ++-|+.+++| |+..+.... ......+.|. .+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~-------~~~~~vv~~~yRlg~~g~~~~~~~~-~~~n~g~~D~~~al~ 162 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLARE-------GDNVIVVSINYRLGVLGFLSTGDIE-LPGNYGLKDQRLALK 162 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhc-------CCCEEEEEecccccccccccCCCCC-CCcchhHHHHHHHHH
Confidence 457899999996432 2222 22344432 3 3899999999 333332211 0022334443 34
Q ss_pred HHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 111 DLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 111 ~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+.+-++..+ .+ +|+|+|+|.||..+..++..... ...++++|+.++...
T Consensus 163 wv~~~i~~fggd~~-~v~~~G~SaG~~~~~~~~~~~~~------~~lf~~~i~~sg~~~ 214 (493)
T cd00312 163 WVQDNIAAFGGDPD-SVTIFGESAGGASVSLLLLSPDS------KGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHhCCCcc-eEEEEeecHHHHHhhhHhhCcch------hHHHHHHhhhcCCcc
Confidence 4555556654 45 89999999999999888775211 117889998887643
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00038 Score=57.71 Aligned_cols=71 Identities=18% Similarity=0.188 Sum_probs=51.8
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH---HHHHHHHHHHh
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK---GLLEIVAPRIA 323 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~ 323 (325)
....+..+.. +|+++++|.+|..++......+.......+ .+...+++++|......+. +..+.+.+|+.
T Consensus 223 ~~~~~~~i~~-~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~------~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 223 PFDDAEKISP-RPVLLVHGERDEVVPLRDAEDLYEAARERP------KKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred chhhHhhcCC-cceEEEecCCCcccchhhhHHHHhhhccCC------ceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 3334444433 699999999999999988877776665421 6888888999998865444 67778888876
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 296 ~ 296 (299)
T COG1073 296 R 296 (299)
T ss_pred H
Confidence 4
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00015 Score=65.23 Aligned_cols=113 Identities=19% Similarity=0.211 Sum_probs=64.5
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccC--------CCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTS--------ASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLA 113 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~ 113 (325)
.++-||+|++|..|+...-+.++..-...+.+.. .-..|+.+++|+-+- .|.- ...++.+.++-+.
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~tAm-----~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FTAM-----HGHILLDQTEYVN 160 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hhhh-----ccHhHHHHHHHHH
Confidence 4678999999999988776666554442111000 012356677776421 0111 2345666666555
Q ss_pred HHHHHh-----C-------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 114 NLVKAK-----G-------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 114 ~~l~~~-----~-------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+.++.. + ..+.+++|||||||++|...+. +|....+ .|.-++.++++
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~----sVntIITlssP 219 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQG----SVNTIITLSSP 219 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccc----hhhhhhhhcCc
Confidence 554422 2 1125999999999999887664 3431111 56666666654
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00016 Score=49.46 Aligned_cols=58 Identities=10% Similarity=0.025 Sum_probs=51.1
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.|+|+|.++.|...+.+..+.+.+.+.+ ++++.+++.||......-.-+.+.+.+||.
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~--------s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG--------SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC--------ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 7999999999999999999988888876 899999999999987555677888888885
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00068 Score=59.42 Aligned_cols=234 Identities=13% Similarity=0.070 Sum_probs=124.7
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC--
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-- 98 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-- 98 (325)
+..||.+|.|...+..-..++.|++|+-=|...-+ -.|........+ +|...+.-++||=|.-.+.-+
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLe--------rGg~~v~ANIRGGGEfGp~WH~A 471 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLE--------RGGVFVLANIRGGGEFGPEWHQA 471 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHh--------cCCeEEEEecccCCccCHHHHHH
Confidence 34689999999987221222567776555443322 234444444444 788888889999765432110
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 99 ---LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 99 ---~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
......+++++.-...++++- .++ ++-+-|-|-||.+.-....++|| .+.++|+--|...+..
T Consensus 472 a~k~nrq~vfdDf~AVaedLi~rgitspe-~lgi~GgSNGGLLvg~alTQrPe--------lfgA~v~evPllDMlR--- 539 (648)
T COG1505 472 GMKENKQNVFDDFIAVAEDLIKRGITSPE-KLGIQGGSNGGLLVGAALTQRPE--------LFGAAVCEVPLLDMLR--- 539 (648)
T ss_pred HhhhcchhhhHHHHHHHHHHHHhCCCCHH-HhhhccCCCCceEEEeeeccChh--------hhCceeeccchhhhhh---
Confidence 002223444444444444332 123 68899999999999999999999 7777665444432211
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
.-. .. .-..|+.+.-.... +... ..+..|... ..+..
T Consensus 540 ----------Yh~----l~-----------------aG~sW~~EYG~Pd~--------P~d~-~~l~~YSPy---~nl~~ 576 (648)
T COG1505 540 ----------YHL----LT-----------------AGSSWIAEYGNPDD--------PEDR-AFLLAYSPY---HNLKP 576 (648)
T ss_pred ----------hcc----cc-----------------cchhhHhhcCCCCC--------HHHH-HHHHhcCch---hcCCc
Confidence 000 00 00112221111110 1111 122222222 12222
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH--HHHHHHHHHHh
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK--GLLEIVAPRIA 323 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~--~~~~~i~~fl~ 323 (325)
-.+--|+|+-.+..|+.|-|..+..+...+...+.. +=+.+=-++||..--...+ .-...+..||.
T Consensus 577 g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~p----v~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~ 644 (648)
T COG1505 577 GQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAP----VLLREETKGGHGGAAPTAEIARELADLLAFLL 644 (648)
T ss_pred cccCCCeEEEcccccccccchHHHHHHHHHHhcCCc----eEEEeecCCcccCCCChHHHHHHHHHHHHHHH
Confidence 111137899999999999999888888888776531 3333334579987654333 22334445554
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0004 Score=57.88 Aligned_cols=87 Identities=21% Similarity=0.108 Sum_probs=59.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
+...-||+-|=|+-...=+.+...|.+ .|+.|+.+|-.-|--| .-+.++.++|+..+++..
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~--------~gvpVvGvdsLRYfW~--------~rtPe~~a~Dl~r~i~~y~~~ 322 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQK--------QGVPVVGVDSLRYFWS--------ERTPEQIAADLSRLIRFYARR 322 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHH--------CCCceeeeehhhhhhc--------cCCHHHHHHHHHHHHHHHHHh
Confidence 344556776665533333445666666 8999999995434333 335678888888888754
Q ss_pred -CCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 120 -GWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 120 -~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+.. ++.|+|+|+|+-+.-..-.+.|.
T Consensus 323 w~~~-~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 323 WGAK-RVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred hCcc-eEEEEeecccchhhHHHHHhCCH
Confidence 556 89999999999987766666554
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0017 Score=61.47 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=75.5
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
...|+++|+|-.-+....+++++..|. .|-||.-....- +..++++.+.-...-++++.+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle------------------~PaYglQ~T~~v--P~dSies~A~~yirqirkvQP 2180 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE------------------IPAYGLQCTEAV--PLDSIESLAAYYIRQIRKVQP 2180 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC------------------CcchhhhccccC--CcchHHHHHHHHHHHHHhcCC
Confidence 457899999998877666655544332 355554333222 567899999999999999998
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
.+|+.++|+|+|+.++..+|....++. ....+|++++.+..
T Consensus 2181 ~GPYrl~GYSyG~~l~f~ma~~Lqe~~------~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2181 EGPYRLAGYSYGACLAFEMASQLQEQQ------SPAPLILLDGSPTY 2221 (2376)
T ss_pred CCCeeeeccchhHHHHHHHHHHHHhhc------CCCcEEEecCchHH
Confidence 889999999999999999997655421 45669999987643
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0019 Score=48.59 Aligned_cols=55 Identities=24% Similarity=0.126 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
--++-+.+|..|++.+. .+..+.++|||+|+.++-..+...+. .+..+|+++++.
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--------~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--------RVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--------CcccEEEECCCC
Confidence 35666777888887663 23379999999999999999887555 899999998764
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00088 Score=57.66 Aligned_cols=120 Identities=17% Similarity=0.070 Sum_probs=69.5
Q ss_pred EcccCCCCCCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCc-eEEEEeCCC-C-CCC---CCCCC--CCCCC
Q 020518 34 EVRSSSDRPYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSE-WRMVLVDLR-N-HGR---SAEIE--GLDPP 102 (325)
Q Consensus 34 ~~~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~-~~vi~~D~~-G-~G~---S~~~~--~~~~~ 102 (325)
.+.+..+..+.|++|+|||.+- +......--..|++ +| +-|+++++| | +|. |.... .....
T Consensus 84 IwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~--------~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n 155 (491)
T COG2272 84 IWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAA--------RGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN 155 (491)
T ss_pred eeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHh--------cCCEEEEEeCcccccceeeehhhcccccccccc
Confidence 3333323345699999999743 33321111234665 55 888888887 1 121 11110 00012
Q ss_pred CCHHHH---HHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 103 HDIANA---ANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 103 ~~~~~~---~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.-+.|+ .+.+.+-|++.|-+ .+|.|+|+|.||+.++.+.+. |+ .. ..+.++|+.++...
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~-Ak----GLF~rAi~~Sg~~~ 218 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PS-AK----GLFHRAIALSGAAS 218 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-cc-ch----HHHHHHHHhCCCCC
Confidence 233443 45667778888643 279999999999988877764 54 11 16777788887654
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0068 Score=46.10 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=69.8
Q ss_pred CCCceEEEecCCCCC-CCChHH------------HHHHHHhhhhccCCCCceEEEEeCCCC---CCCCCCCCCCCCCCCH
Q 020518 42 PYTSTAFVLHGLLGS-GRNWRS------------FSRNLASTLSQTSASSEWRMVLVDLRN---HGRSAEIEGLDPPHDI 105 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~-~~~~~~------------~~~~l~~~~~~~~~~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~ 105 (325)
.....+|+|||-|-- +..|.+ +++.+.+... .||.|+..+.-- +-.+...+.. ...+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~-----~Gygviv~N~N~~~kfye~k~np~k-yirt~ 172 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVA-----EGYGVIVLNPNRERKFYEKKRNPQK-YIRTP 172 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHH-----cCCcEEEeCCchhhhhhhcccCcch-hccch
Confidence 446689999998763 344531 1222222221 799999887531 2222221110 12233
Q ss_pred HHHHHH-HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 106 ANAAND-LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 106 ~~~~~~-l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
.+.+.- ...++...... .+.++.||.||...+.+..++|+. ++|.++.+-+++...
T Consensus 173 veh~~yvw~~~v~pa~~~-sv~vvahsyGG~~t~~l~~~f~~d------~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 173 VEHAKYVWKNIVLPAKAE-SVFVVAHSYGGSLTLDLVERFPDD------ESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHHHHHHHhcccCcc-eEEEEEeccCChhHHHHHHhcCCc------cceEEEEeecccccC
Confidence 344433 34455555667 899999999999999999999972 478888888877433
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00087 Score=55.55 Aligned_cols=112 Identities=25% Similarity=0.224 Sum_probs=68.9
Q ss_pred CCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCC--C------------CCCCCCCCCCCC-----
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDL--R------------NHGRSAEIEGLD----- 100 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~--~------------G~G~S~~~~~~~----- 100 (325)
.+-|+++++||..++...|..+ ++..... .++.++++|- | |-+.|-......
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~-------~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~ 124 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADE-------SGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWAS 124 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhh-------cCeEEecCCCCcccCCCCccccccCCCccceecccccCcccc
Confidence 3457888999998886444321 2222322 6777777632 2 333332111100
Q ss_pred CCCCHHHH-HHHHHHHHHHhCC-CC---CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 101 PPHDIANA-ANDLANLVKAKGW-DW---PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 101 ~~~~~~~~-~~~l~~~l~~~~~-~~---~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
..+.++++ .+++-+.+++... .. ...++||||||.=|+.+|+++|+ +++.+..+++....
T Consensus 125 ~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--------~f~~~sS~Sg~~~~ 189 (316)
T COG0627 125 GPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--------RFKSASSFSGILSP 189 (316)
T ss_pred CccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--------hhceeccccccccc
Confidence 12555554 4456545554432 21 57899999999999999999999 99998888876443
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00069 Score=50.29 Aligned_cols=56 Identities=20% Similarity=0.126 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 106 ANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 106 ~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
..+...+...+++. ... +++++|||+||.+|..++........ ..+..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~-~i~v~GHSlGg~lA~l~a~~~~~~~~----~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDY-KIHVTGHSLGGALAGLAGLDLRGRGL----GRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCC-eEEEEEcCHHHHHHHHHHHHHHhccC----CCceEEEEeCCCc
Confidence 34445555555443 445 89999999999999999988765110 1456677777653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00071 Score=49.33 Aligned_cols=40 Identities=30% Similarity=0.297 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+...+.+..++++.... ++++.|||+||.+|..++....+
T Consensus 48 ~~~~~~l~~~~~~~~~~-~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 48 DQILDALKELVEKYPDY-SIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHSTTS-EEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCc-cchhhccchHHHHHHHHHHhhhh
Confidence 34556666766666645 89999999999999999987644
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0017 Score=54.39 Aligned_cols=96 Identities=23% Similarity=0.242 Sum_probs=68.4
Q ss_pred CceEEEecCCCCCCCChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-------CCCCCHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-------DPPHDIANAANDLA 113 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~l~ 113 (325)
+.||+|.-|--++.+.|.. ++-.++..+ +--+|...+|-+|.|.+-... -...+.++-..|..
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~-------~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA 152 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPEL-------KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFA 152 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhh-------CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHH
Confidence 3689999999887765542 344444432 337889999999999764321 02335666667777
Q ss_pred HHHHHhCC-----CCCEEEEEeChhHHHHHHHHHHccc
Q 020518 114 NLVKAKGW-----DWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 114 ~~l~~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
.++..+.- ..+++++|-|.||++|..+=.+||.
T Consensus 153 ~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 153 ELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred HHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 77766532 2389999999999999999999999
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0033 Score=54.88 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=82.2
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh---------------hccCCCCceEEEEeC-CCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL---------------SQTSASSEWRMVLVD-LRNH 90 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~~~vi~~D-~~G~ 90 (325)
+..+.|.-+.+.....+.|.|+++.|.++++..+..+.+ +.... ...+-++-.+++.+| ..|.
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e-~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 129 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFE-NGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGS 129 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHh-cCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCC
Confidence 456777766655445568999999999998866533221 11000 000123456899999 6699
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc--CCccCCcceEEE
Q 020518 91 GRSAEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY--GQFVALPKQLWV 161 (325)
Q Consensus 91 G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~--~~~~~~v~~lvl 161 (325)
|.|...... ...+-++.++++..++... ... +++|.|.|.||..+-.+|..--+... ......++++++
T Consensus 130 GfSy~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~i 207 (437)
T PLN02209 130 GFSYSKTPI-ERTSDTSEVKKIHEFLQKWLIKHPQFLSN-PFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVL 207 (437)
T ss_pred CccCCCCCC-CccCCHHHHHHHHHHHHHHHHhCccccCC-CEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEe
Confidence 998654321 1223334557766666543 224 89999999999987777755322110 011125678888
Q ss_pred EecCC
Q 020518 162 LDSVP 166 (325)
Q Consensus 162 i~~~~ 166 (325)
.++..
T Consensus 208 gng~t 212 (437)
T PLN02209 208 GNPIT 212 (437)
T ss_pred cCccc
Confidence 87753
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.077 Score=42.74 Aligned_cols=255 Identities=13% Similarity=0.150 Sum_probs=132.5
Q ss_pred CceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.|.|+++--+.++... .+..++.|. ....|+..|+-.-..-.... ..++++++.+-+.+++..+|.+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alL---------p~~~vyitDW~dAr~Vp~~~---G~FdldDYIdyvie~~~~~Gp~ 170 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALL---------PYHDVYITDWVDARMVPLEA---GHFDLDDYIDYVIEMINFLGPD 170 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhc---------cccceeEeeccccceeeccc---CCccHHHHHHHHHHHHHHhCCC
Confidence 5577777777664433 344566665 56688888886544333322 5789999999999999999965
Q ss_pred CCEEEEEeChh-----HHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH--HHHHHHhhc-----CCC
Q 020518 123 WPDVVIGHSMG-----GKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV--EKVLQTLQS-----LPS 190 (325)
Q Consensus 123 ~~~~lvGhS~G-----g~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~ 190 (325)
.++++-+-= +.++++.+...|. ....+++++++............+ .+-+.++.. .+.
T Consensus 171 --~hv~aVCQP~vPvLAAisLM~~~~~p~--------~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~ 240 (415)
T COG4553 171 --AHVMAVCQPTVPVLAAISLMEEDGDPN--------VPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPP 240 (415)
T ss_pred --CcEEEEecCCchHHHHHHHHHhcCCCC--------CCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCC
Confidence 556665543 4455555555665 778999998875433221111111 111111111 111
Q ss_pred C--------CCcHHHHHHHHHhhccch---hHHHHHhhcccCCCccc----------------ccccChhHHHHhhhccc
Q 020518 191 S--------IPSRKWLVNHMMELGFSK---SLSEWIGTNLKKSGERE----------------TWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 191 ~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 243 (325)
. .+........ ...+..+ .-.+++......+.+.. ...+-.+.....+..+.
T Consensus 241 ~ypg~gR~VYPGFlQlagF-msmNldrH~~aH~~~~~~Lv~~D~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~ 319 (415)
T COG4553 241 PYPGFGRRVYPGFLQLAGF-MSMNLDRHIDAHKDFFLSLVKNDGDSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHA 319 (415)
T ss_pred CCCCccccccccHHHhhhH-hhcChhhhHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhc
Confidence 1 1111111111 1111111 00111111111110000 00011111111222111
Q ss_pred C--CcccccccCCC----CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc---ChHHH
Q 020518 244 E--MSYWPLLEHPP----QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGL 314 (325)
Q Consensus 244 ~--~~~~~~~~~~~----~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~ 314 (325)
- -.....-..++ .++-.+-|-|+.|++...-+.+....+..++++. ..+...-+++||+..+. -.+++
T Consensus 320 LpkG~~vhrg~~vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~---mk~hy~qp~vGHYGVFnGsrfr~eI 396 (415)
T COG4553 320 LPKGEMVHRGKPVDPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPED---MKQHYMQPDVGHYGVFNGSRFREEI 396 (415)
T ss_pred ccCCceeecCCcCChhheeceeEEEeecccccccccchhHHHHHHHhcChHH---HHHHhcCCCCCccceeccchHHHHH
Confidence 0 00111111111 1345577899999998887788888888877653 24567779999998775 35788
Q ss_pred HHHHHHHHhc
Q 020518 315 LEIVAPRIAS 324 (325)
Q Consensus 315 ~~~i~~fl~~ 324 (325)
...|.+|+.+
T Consensus 397 vPri~dFI~~ 406 (415)
T COG4553 397 VPRIRDFIRR 406 (415)
T ss_pred HHHHHHHHHH
Confidence 8899999864
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.018 Score=52.33 Aligned_cols=110 Identities=13% Similarity=-0.015 Sum_probs=62.1
Q ss_pred CCceEEEecCCCCCCC----ChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHH---HHH
Q 020518 43 YTSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANA---AND 111 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~~~ 111 (325)
..|++|+|||.+.... ....-...+.. ++.-||.+++| |+-.+.........+-+.|+ .+.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~--------~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~W 195 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAAS--------KDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKW 195 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHH--------HTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccC--------CCEEEEEecccccccccccccccccCchhhhhhhhHHHHHH
Confidence 4699999999755332 12222333343 78899999998 33332221110023344444 345
Q ss_pred HHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 112 LANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 112 l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+-|...| .+ +|+|+|||.||..+...+.. |. ....+++.|+.++.+.
T Consensus 196 V~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s-p~-----~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 196 VQDNIAAFGGDPD-NVTLFGQSAGAASVSLLLLS-PS-----SKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHG-GG-----GTTSBSEEEEES--TT
T ss_pred HHhhhhhcccCCc-ceeeeeecccccccceeeec-cc-----cccccccccccccccc
Confidence 566666775 34 79999999999988877766 43 1238999999998643
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.019 Score=46.57 Aligned_cols=107 Identities=18% Similarity=0.082 Sum_probs=62.7
Q ss_pred CCCceEEEecCCCC--CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLG--SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH---GRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 42 ~~~~~vv~~HG~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
..-|.+++.||--. +...+. +++.|... +....--++.+|.--- ..... . ....+..++++|.=++
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~----g~i~pai~vgid~~d~~~R~~~~~--~--n~~~~~~L~~eLlP~v 166 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPR-ILDSLIAA----GEIPPAILVGIDYIDVKKRREELH--C--NEAYWRFLAQELLPYV 166 (299)
T ss_pred ccccEEEEeccHHHHhcCChHH-HHHHHHHc----CCCCCceEEecCCCCHHHHHHHhc--c--cHHHHHHHHHHhhhhh
Confidence 34678899997532 222232 33333321 1113345555554321 00000 0 2234455555666666
Q ss_pred HHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++.- .+ .-+|.|-|+||.+++..+.++|+ ++..++..++..
T Consensus 167 ~~~yp~~~~a~-~r~L~G~SlGG~vsL~agl~~Pe--------~FG~V~s~Sps~ 212 (299)
T COG2382 167 EERYPTSADAD-GRVLAGDSLGGLVSLYAGLRHPE--------RFGHVLSQSGSF 212 (299)
T ss_pred hccCcccccCC-CcEEeccccccHHHHHHHhcCch--------hhceeeccCCcc
Confidence 5442 23 57899999999999999999999 999988888764
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.013 Score=46.15 Aligned_cols=94 Identities=17% Similarity=0.217 Sum_probs=60.2
Q ss_pred CceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHH
Q 020518 44 TSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL----ANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l----~~~l 116 (325)
+..|-|+-|..-.+ -.|+.+.+.|++ +||.|++.-+. ...+-...|+.+ ...+
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~--------~Gy~ViAtPy~------------~tfDH~~~A~~~~~~f~~~~ 76 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLAD--------RGYAVIATPYV------------VTFDHQAIAREVWERFERCL 76 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHh--------CCcEEEEEecC------------CCCcHHHHHHHHHHHHHHHH
Confidence 44566777763333 457788899997 99999998653 223333333332 2222
Q ss_pred HHh----CCC---CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 117 KAK----GWD---WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 117 ~~~----~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+.+ +.. -|++-+|||||+.+-+.+...++. .-++-++++-.
T Consensus 77 ~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~--------~r~gniliSFN 124 (250)
T PF07082_consen 77 RALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDV--------ERAGNILISFN 124 (250)
T ss_pred HHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccC--------cccceEEEecC
Confidence 222 221 267889999999999998888765 44677777754
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0064 Score=53.08 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=79.1
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh---------------hccCCCCceEEEEeC-CCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL---------------SQTSASSEWRMVLVD-LRNH 90 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~~~vi~~D-~~G~ 90 (325)
+..++|.-+.+.....+.|.|+++.|.++++..+..+. ++.... ...+-++..+++.+| .-|.
T Consensus 49 ~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~-e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 127 (433)
T PLN03016 49 NVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIF-ENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGS 127 (433)
T ss_pred CeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHH-hcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCC
Confidence 45677777666545567899999999988776432211 111100 001123456899999 6699
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc--CCccCCcceEEE
Q 020518 91 GRSAEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY--GQFVALPKQLWV 161 (325)
Q Consensus 91 G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~--~~~~~~v~~lvl 161 (325)
|.|..........+. +.++++..++... ... +++|.|.|.||..+-.+|..--++.. ......++++++
T Consensus 128 GfSy~~~~~~~~~d~-~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~i 205 (433)
T PLN03016 128 GFSYSKTPIDKTGDI-SEVKRTHEFLQKWLSRHPQYFSN-PLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML 205 (433)
T ss_pred CccCCCCCCCccCCH-HHHHHHHHHHHHHHHhChhhcCC-CEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEe
Confidence 999754321111122 2335555555432 234 89999999999987777765322110 001125788888
Q ss_pred EecC
Q 020518 162 LDSV 165 (325)
Q Consensus 162 i~~~ 165 (325)
-++.
T Consensus 206 GNg~ 209 (433)
T PLN03016 206 GNPV 209 (433)
T ss_pred cCCC
Confidence 7765
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.055 Score=45.38 Aligned_cols=63 Identities=19% Similarity=0.250 Sum_probs=51.3
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
.+.+.+.+..|.+++.+..+.+.++....+.. ++-+-+.++-|..+.. .|..+.+...+|+++
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~----v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVN----VKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCce----EEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 46689999999999999998887776665432 6777778889998874 799999999999975
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0026 Score=56.34 Aligned_cols=95 Identities=18% Similarity=0.129 Sum_probs=54.9
Q ss_pred ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCCEEEEEeChhH
Q 020518 59 NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK----GWDWPDVVIGHSMGG 134 (325)
Q Consensus 59 ~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg 134 (325)
.|..+++.|.. -||. -.++.|...--+.... ....-+++-..+..+++.. +-+ +++|+||||||
T Consensus 157 vw~kLIe~L~~--------iGY~--~~nL~gAPYDWRls~~-~le~rd~YF~rLK~lIE~ay~~nggk-KVVLV~HSMGg 224 (642)
T PLN02517 157 VWAVLIANLAR--------IGYE--EKNMYMAAYDWRLSFQ-NTEVRDQTLSRLKSNIELMVATNGGK-KVVVVPHSMGV 224 (642)
T ss_pred eHHHHHHHHHH--------cCCC--CCceeecccccccCcc-chhhhhHHHHHHHHHHHHHHHHcCCC-eEEEEEeCCch
Confidence 56889999987 7776 3444433222111100 1122355555566666543 335 99999999999
Q ss_pred HHHHHHHHHccc--cccCC-----ccCCcceEEEEecC
Q 020518 135 KVALHFAQSCAR--ADYGQ-----FVALPKQLWVLDSV 165 (325)
Q Consensus 135 ~~a~~~a~~~p~--~~~~~-----~~~~v~~lvli~~~ 165 (325)
.+++.+...... ...|. ....|++.|.++++
T Consensus 225 lv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 225 LYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 999998764221 00000 01257888888875
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.014 Score=52.01 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=68.2
Q ss_pred CCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC---CCCC--CCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA---EIEG--LDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~---~~~~--~~~~~~~~~~~~~l~~ 114 (325)
.++|.+|..+|.-+-+ -.|..-...|.+ .|+-....|.||=|.-. ...+ .....+++++.....-
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld--------~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~Aey 539 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLD--------RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEY 539 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEe--------cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHH
Confidence 4567777666654422 233332222333 67777778899865432 2211 0034567777776666
Q ss_pred HHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 115 LVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 115 ~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
++++- ..+ +..+.|.|.||.++..++..+|+ .+..+|+-.|.
T Consensus 540 Lve~gyt~~~-kL~i~G~SaGGlLvga~iN~rPd--------LF~avia~Vpf 583 (712)
T KOG2237|consen 540 LVENGYTQPS-KLAIEGGSAGGLLVGACINQRPD--------LFGAVIAKVPF 583 (712)
T ss_pred HHHcCCCCcc-ceeEecccCccchhHHHhccCch--------HhhhhhhcCcc
Confidence 66643 234 79999999999999999999999 88887765554
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0064 Score=52.65 Aligned_cols=130 Identities=18% Similarity=0.170 Sum_probs=76.7
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhcc----------CCCCceEEEEeC-CCCCCCCCCCCC
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQT----------SASSEWRMVLVD-LRNHGRSAEIEG 98 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~vi~~D-~~G~G~S~~~~~ 98 (325)
+.++.+.+.....++|.++++.|.++++..|..+.+.=-.+...+ +.+..-.++.+| .-|.|.|....+
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc
Confidence 334444443444578999999999999988766543111111000 011223689999 669999985221
Q ss_pred CCCCCCHHHHHHHHHHHHHHh--------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 99 LDPPHDIANAANDLANLVKAK--------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 99 ~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+..-+.....+|+..+++.. .+-.+.+|+|.|+||.-+..+|..--++. ...++++++.+.
T Consensus 167 -e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~-----~~~~~~~nlssv 235 (498)
T COG2939 167 -EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDN-----IALNGNVNLSSV 235 (498)
T ss_pred -ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhc-----cccCCceEeeee
Confidence 13445555555555544322 22228999999999999999887654410 024555555543
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.026 Score=44.59 Aligned_cols=52 Identities=23% Similarity=0.227 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++-+..+++.. .+ ++++.|||.||.+|..++...++... .+|.+++..+++.
T Consensus 72 ~~yl~~~~~~~-~~-~i~v~GHSkGGnLA~yaa~~~~~~~~----~rI~~vy~fDgPG 123 (224)
T PF11187_consen 72 LAYLKKIAKKY-PG-KIYVTGHSKGGNLAQYAAANCDDEIQ----DRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHhC-CC-CEEEEEechhhHHHHHHHHHccHHHh----hheeEEEEeeCCC
Confidence 33444444443 34 79999999999999999988543111 2789999999864
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0025 Score=46.58 Aligned_cols=119 Identities=15% Similarity=0.120 Sum_probs=71.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCc-eEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSE-WRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
++.+.+..+|.. +.+||+++--++....|+. .+..|++... .| ...++++ |-..-+-........
T Consensus 14 ~RdMel~ryGHa-----G~pVvvFpts~Grf~eyed~G~v~ala~fie-----~G~vQlft~~--gldsESf~a~h~~~a 81 (227)
T COG4947 14 NRDMELNRYGHA-----GIPVVVFPTSGGRFNEYEDFGMVDALASFIE-----EGLVQLFTLS--GLDSESFLATHKNAA 81 (227)
T ss_pred cchhhhhhccCC-----CCcEEEEecCCCcchhhhhcccHHHHHHHHh-----cCcEEEEEec--ccchHhHhhhcCCHH
Confidence 456677778875 6677777777776666654 3566665542 33 3444443 332211111000111
Q ss_pred CHHHHHHHHHHHH-HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLV-KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l-~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+-...-+.+.+.+ ++.-+. +.++-|.||||.-|..+..++|+ ...++|.+++..
T Consensus 82 dr~~rH~AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~--------lftkvialSGvY 136 (227)
T COG4947 82 DRAERHRAYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPH--------LFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHHHHHHHHHhhcCC-CccccccchhhhhhhhhheeChh--------Hhhhheeeccee
Confidence 1122223333433 444444 78889999999999999999999 999999998764
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0032 Score=50.06 Aligned_cols=48 Identities=19% Similarity=0.307 Sum_probs=38.5
Q ss_pred HHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 110 NDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 110 ~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+.-++++- +.+ +-.++|||+||.+++.....+|+ .+...++++|+.
T Consensus 122 ~~lkP~Ie~~y~~~~~-~~~i~GhSlGGLfvl~aLL~~p~--------~F~~y~~~SPSl 172 (264)
T COG2819 122 EQLKPFIEARYRTNSE-RTAIIGHSLGGLFVLFALLTYPD--------CFGRYGLISPSL 172 (264)
T ss_pred HhhHHHHhcccccCcc-cceeeeecchhHHHHHHHhcCcc--------hhceeeeecchh
Confidence 3444555542 334 68999999999999999999999 999999999874
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0054 Score=48.92 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=19.8
Q ss_pred CEEEEEeChhHHHHHHHHHHcc
Q 020518 124 PDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
++++.|||+||.+|..++....
T Consensus 129 ~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 129 KIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred eEEEEccCHHHHHHHHHHHHHH
Confidence 8999999999999999888754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0023 Score=38.99 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=22.6
Q ss_pred ccccccceEEEEcccCC----CCCCCceEEEecCCCCCCCChH
Q 020518 23 TTRSLQTLAYEEVRSSS----DRPYTSTAFVLHGLLGSGRNWR 61 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~----~~~~~~~vv~~HG~~~~~~~~~ 61 (325)
+++||.-|.......+. ....+|+|++.||+.+++..|-
T Consensus 18 ~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 18 TTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp E-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 34678777766655443 4467899999999999998883
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.023 Score=49.11 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=79.1
Q ss_pred CCCceEEEecCCCCCCCChHH----HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----CCCCHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRS----FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD----PPHDIANAANDLA 113 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~l~ 113 (325)
+++|..++|-|=+.-...|-. ..-.+++.+ |-.|+-+.+|=+|.|.+..+.. ...+..+...|+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf-------gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla 156 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF-------GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLA 156 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHh-------CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHH
Confidence 457777888777665555521 233445443 5599999999999986654321 2347888899999
Q ss_pred HHHHHhCCC------CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 114 NLVKAKGWD------WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 114 ~~l~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+|+++..+ .+++.+|-|+-|.++..+=.+||+ .+.+-|.-+++
T Consensus 157 ~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--------l~~GsvASSap 206 (514)
T KOG2182|consen 157 EFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--------LTVGSVASSAP 206 (514)
T ss_pred HHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--------hheeecccccc
Confidence 999877321 289999999999999999999999 77776655543
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0081 Score=46.28 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=47.3
Q ss_pred CceEEEEeCCCCCCCCCCC-CC-----CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 78 SEWRMVLVDLRNHGRSAEI-EG-----LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~-~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
.-.+|+++=+|-....... .. ........|..+....+|++.+-+++++|+|||-|+.++.++..++
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4458888887754322221 10 0023356677777888888887777999999999999999999876
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0018 Score=44.75 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=23.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS 64 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~ 64 (325)
+|..|+|....+. .++..||||+|||++|-..|.+++
T Consensus 76 ~g~~iHFih~rs~--~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 76 DGLDIHFIHVRSK--RPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTEEEEEEEE--S---TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEEEEEeeCC--CCCCeEEEEECCCCccHHhHHhhC
Confidence 4889999987763 346789999999999887776653
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0065 Score=52.10 Aligned_cols=71 Identities=25% Similarity=0.318 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhhhhccCCCCceE------EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHhCCCCCEEEE
Q 020518 59 NWRSFSRNLASTLSQTSASSEWR------MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV----KAKGWDWPDVVI 128 (325)
Q Consensus 59 ~~~~~~~~l~~~~~~~~~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~lv 128 (325)
.|..++..|.. -||. -..+|+|= |.. .....+++...+...+ +.-|-+ +++||
T Consensus 125 ~w~~~i~~lv~--------~GYe~~~~l~ga~YDwRl---s~~-----~~e~rd~yl~kLK~~iE~~~~~~G~k-kVvli 187 (473)
T KOG2369|consen 125 YWHELIENLVG--------IGYERGKTLFGAPYDWRL---SYH-----NSEERDQYLSKLKKKIETMYKLNGGK-KVVLI 187 (473)
T ss_pred HHHHHHHHHHh--------hCcccCceeeccccchhh---ccC-----ChhHHHHHHHHHHHHHHHHHHHcCCC-ceEEE
Confidence 67778887775 4554 33567662 111 1223344444444444 444556 99999
Q ss_pred EeChhHHHHHHHHHHccc
Q 020518 129 GHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 129 GhS~Gg~~a~~~a~~~p~ 146 (325)
+||||+.+.+.+...+++
T Consensus 188 sHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 188 SHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred ecCCccHHHHHHHhcccc
Confidence 999999999999988876
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.43 Score=43.18 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=71.1
Q ss_pred CCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC---CC--CCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI---EG--LDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~---~~--~~~~~~~~~~~~~l~~ 114 (325)
.+.|.++..=|.-+.+ ..|....-.|.+ +|+-.-...-||=|.=... .+ .....++.++.+....
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlD--------RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~ 517 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLD--------RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARH 517 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeec--------CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHH
Confidence 4566666666654432 233333333443 6765555566775432211 00 1156788999888888
Q ss_pred HHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 115 LVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 115 ~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++++--.+ ..++++|-|.||++.-..+...|+ .++++|+--|..
T Consensus 518 Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--------lf~~iiA~VPFV 562 (682)
T COG1770 518 LVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--------LFAGIIAQVPFV 562 (682)
T ss_pred HHHcCcCCccceEEeccCchhHHHHHHHhhChh--------hhhheeecCCcc
Confidence 88764322 279999999999999999999999 999998766653
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.011 Score=51.00 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
..++.+.+.+++.+.... ++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~-kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNL-KYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCc-eEEEEecChHHHHHHHHHH
Confidence 445556667777665545 8999999999999998865
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.014 Score=50.59 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
..++.+.+..++++.... ++++.|||+||++|..+|..
T Consensus 267 yy~i~~~Lk~ll~~~p~~-kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTS-KFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHHHCCCC-eEEEEecCHHHHHHHHHHHH
Confidence 445667788888776655 89999999999999998853
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0098 Score=50.79 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHc
Q 020518 108 AANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 108 ~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+...+..+++...-. .++++.||||||.+|+.+|...
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 344455555544333 1399999999999999998664
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.061 Score=39.10 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=51.4
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceE-EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR-MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
..||.+-||+..+..+..++ +. +++. ++++|+...... .++.. .+
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lp---------eN~dl~lcYDY~dl~ld---------fDfsA-------------y~- 57 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LP---------ENHDLLLCYDYQDLNLD---------FDFSA-------------YR- 57 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CC---------CCCcEEEEeehhhcCcc---------cchhh-------------hh-
Confidence 37888999998877665543 12 4444 567887643321 11111 24
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+-||++|||-.+|-++.... +.++.+.+++.
T Consensus 58 hirlvAwSMGVwvAeR~lqg~----------~lksatAiNGT 89 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGI----------RLKSATAINGT 89 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhc----------cccceeeecCC
Confidence 678999999999999998876 56777777765
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.012 Score=50.40 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++.+++..+++..... .++++.||||||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 55667777877765432 2689999999999999988763
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.015 Score=49.02 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccc
Q 020518 107 NAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
++.+++..++++..-. .++++.|||+||.+|..+|.....
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 4456677777765433 259999999999999998876543
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.0096 Score=50.12 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=54.8
Q ss_pred CCceEEEecCCCC-CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 43 YTSTAFVLHGLLG-SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
.+-.+|+.||+-+ +...|...+....... .+..++ .+|+-............--+..++++.+.+....+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~------p~~~iv---~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si 149 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKM------PDKLIV---VRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI 149 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCC------CcceEe---eeccccchhhccccceeeecccHHHHhhhhhcccc
Confidence 3457899999987 5667777776666543 344333 33433222221101122234455556666665667
Q ss_pred CCCEEEEEeChhHHHHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+ ++-++|||+||.++..+...
T Consensus 150 ~-kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 150 E-KISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred c-eeeeeeeecCCeeeeEEEEe
Confidence 8 99999999999987765543
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.019 Score=49.02 Aligned_cols=39 Identities=28% Similarity=0.326 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++.+.+..+++... .+.++++.|||+||.+|..+|...
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 455667777776552 233799999999999999988653
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.023 Score=49.65 Aligned_cols=38 Identities=32% Similarity=0.437 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
..++.+.+..++++.... ++++.|||+||.+|..+|..
T Consensus 304 y~~v~~~lk~ll~~~p~~-kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNA-KFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHHCCCC-eEEEeccccHHHHHHHHHHH
Confidence 445667777777776555 89999999999999998753
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.025 Score=42.69 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=52.9
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC---hHHHHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN---PKGLLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~~ 324 (325)
+++.+-|-|+.|++..+-+......+..+++.. ....++.+||||+-.+.- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~---~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPAD---MKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHH---HhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 367788999999999998888888898887653 356778899999987753 47888899999864
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.029 Score=48.01 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHc
Q 020518 107 NAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
++.+.|..+++...-. .++++.|||+||.+|...|...
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 3455677777765432 2699999999999999998653
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.029 Score=49.15 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
++..+++..+++... .+.++++.|||+||.+|+..|...
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 445677777776653 233699999999999999988653
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.057 Score=41.10 Aligned_cols=108 Identities=11% Similarity=0.009 Sum_probs=55.3
Q ss_pred eEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 46 TAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 46 ~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
-||+..|-+..... -..+...+.+..+. ....+..+++|-..... . ...+..+=+.++...++..
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~----~~~~~~~V~YpA~~~~~---~--y~~S~~~G~~~~~~~i~~~~~~ 77 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGG----TSVAVQGVEYPASLGPN---S--YGDSVAAGVANLVRLIEEYAAR 77 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTT----CEEEEEE--S---SCGG---S--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCC----CeeEEEecCCCCCCCcc---c--ccccHHHHHHHHHHHHHHHHHh
Confidence 35566665543322 22345555544311 34566667766322211 0 1224444444454444432
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHH--ccccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQS--CARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.++.+++|+|+|.|+.++..++.. .+.. ...+|.++++++-+.
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~l~~~----~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDGLPPD----VADRIAAVVLFGDPR 122 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTTSSHH----HHHHEEEEEEES-TT
T ss_pred CCCCCEEEEecccccHHHHHHHHhccCChh----hhhhEEEEEEecCCc
Confidence 345489999999999999999877 2210 112789999988653
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.038 Score=48.56 Aligned_cols=39 Identities=31% Similarity=0.432 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhCC----CCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKGW----DWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++...+..++++... +.++++.|||+||.+|...|...
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 4455666777766532 33899999999999999998653
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.14 Score=41.88 Aligned_cols=143 Identities=18% Similarity=0.057 Sum_probs=83.4
Q ss_pred cccccceEEEEcccCCCC-CCCceEEEecCCCCCCC----ChHHHHHHHHhhhhccC-CCCceEEEEeCCC-CCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDR-PYTSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTS-ASSEWRMVLVDLR-NHGRSAEI 96 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~-~~~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~-~~~~~~vi~~D~~-G~G~S~~~ 96 (325)
++++..+.|.-|-...+. ..+|..+.+.|.++.+. .|+.+-+.=.....+.. -.+.-.++.+|-| |.|.|.-.
T Consensus 10 vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVd 89 (414)
T KOG1283|consen 10 VRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVD 89 (414)
T ss_pred eecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeec
Confidence 345556665554443332 45677788999877553 23332211000000000 0023467888866 88888765
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccCC-ccCCcceEEEEecCCC
Q 020518 97 EGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQ-FVALPKQLWVLDSVPG 167 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~-~~~~v~~lvli~~~~~ 167 (325)
.......+.++++.|+.++++.+ .-. |++++..|.||-+|..++...-+..... -.....+++|=++...
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~-P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTV-PLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCcccccc-ceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 44224457889999999999876 233 8999999999999999887654311111 1114566777666543
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.041 Score=48.30 Aligned_cols=39 Identities=28% Similarity=0.364 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++.+.|..+++... .+.++++.|||+||.+|...|...
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445666777776652 223699999999999999988643
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.083 Score=44.42 Aligned_cols=43 Identities=21% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.. |++|||||+|+.+.+.....-.+. .....|+.+++++++.
T Consensus 218 G~R-pVtLvG~SLGarvI~~cL~~L~~~---~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GER-PVTLVGHSLGARVIYYCLLELAER---KAFGLVENVVLMGAPV 260 (345)
T ss_pred CCC-ceEEEeecccHHHHHHHHHHHHhc---cccCeEeeEEEecCCC
Confidence 444 899999999999998887766552 1112589999998764
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.046 Score=47.86 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHcc
Q 020518 106 ANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+++.+++..+++...- +.++++.|||+||.+|...|...-
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 3455667777766532 226899999999999999887643
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.051 Score=47.61 Aligned_cols=39 Identities=28% Similarity=0.403 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++...|..+++... .+.++++.|||+||.+|...|...
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 345566666666543 223799999999999999988654
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.12 Score=43.12 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=41.6
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+|..+|.+..|++++|+........+++ ...+.++|+..|... +..+.+.|..|+.
T Consensus 330 lpKyivnaSgDdff~pDsa~lYyd~LPG-------~kaLrmvPN~~H~~~---n~~i~esl~~fln 385 (507)
T COG4287 330 LPKYIVNASGDDFFVPDSANLYYDDLPG-------EKALRMVPNDPHNLI---NQFIKESLEPFLN 385 (507)
T ss_pred ccceeecccCCcccCCCccceeeccCCC-------ceeeeeCCCCcchhh---HHHHHHHHHHHHH
Confidence 6889999999999999877666555554 267888999999765 3455556666654
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.29 Score=44.69 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=60.1
Q ss_pred CceEEEecCCCCCCCC---hHHH--HHHHHhhhhccCCCCceEEEEeCCC----CC---CCCCCCCCCCCCCCHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRN---WRSF--SRNLASTLSQTSASSEWRMVLVDLR----NH---GRSAEIEGLDPPHDIANAAND 111 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~---~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~----G~---G~S~~~~~~~~~~~~~~~~~~ 111 (325)
-|++|++||.+-.... +... ...+.. ++.-|+.+.+| |+ |.+.. + ..+.+.|+...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~--------~~VVvVt~~YRLG~lGF~st~d~~~-~---gN~gl~Dq~~A 179 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLL--------KDVVVVTINYRLGPLGFLSTGDSAA-P---GNLGLFDQLLA 179 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhcccc--------CCEEEEEecccceeceeeecCCCCC-C---CcccHHHHHHH
Confidence 6889999998653322 2111 111121 45567777766 33 22222 2 34555555444
Q ss_pred ---HHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 112 ---LANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 112 ---l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+..-|...| .+ +++|+|||.||..+..+... |.. ..++.+.|..++..
T Consensus 180 L~wv~~~I~~FGGdp~-~vTl~G~saGa~~v~~l~~S-p~s-----~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 180 LRWVKDNIPSFGGDPK-NVTLFGHSAGAASVSLLTLS-PHS-----RGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeechhHHHHHHHhcC-Hhh-----HHHHHHHHhhcccc
Confidence 455555664 44 89999999999998777653 220 01567777776653
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.25 Score=41.59 Aligned_cols=67 Identities=13% Similarity=0.067 Sum_probs=48.4
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------CCC------CC-ceeEEEecCCCccccccChHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------DGS------EG-KVSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~~~------~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
+++||+..|..|-+++....+.+...+.-.+ +.. .. +.+++.+-+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4789999999998888766555544443100 000 01 278888999999997 59999999999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99864
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.12 Score=44.01 Aligned_cols=105 Identities=20% Similarity=0.032 Sum_probs=79.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
.++|+|+..-|++.+...... ++...+ +-+-+.+.+|=+|.|.+.+..=...++++-++|.+.+++++
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~---Ept~Ll-------d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRS---EPTQLL-------DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred CCCCeEEEecCcccccCcccc---chhHhh-------ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 357899999999886543332 333332 22778999999999987653224568999999998888766
Q ss_pred -CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 120 -GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 -~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+ +.+--|-|=||+.++.+=.-||+ -|.+.|.--.+
T Consensus 131 iY~~-kWISTG~SKGGmTa~y~rrFyP~--------DVD~tVaYVAP 168 (448)
T PF05576_consen 131 IYPG-KWISTGGSKGGMTAVYYRRFYPD--------DVDGTVAYVAP 168 (448)
T ss_pred hccC-CceecCcCCCceeEEEEeeeCCC--------CCCeeeeeecc
Confidence 345 89999999999999999999999 88887764443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.12 Score=46.17 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=18.1
Q ss_pred CEEEEEeChhHHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+++++|||+||.+|..++..
T Consensus 252 kLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred eEEEeccChHHHHHHHHHHH
Confidence 79999999999999988765
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.96 Score=51.41 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=74.1
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
.+.|++.|...++...+..+...+. .+..++.+..++.-.... ...++++++....+.+......+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~---------~~~~~~~l~~~~~~~d~~-----~~~~~~~~~~~y~~~~~~~~~~~ 3757 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILE---------GDRHVLGLTCRHLLDDGW-----QDTSLQAMAVQYADYILWQQAKG 3757 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhC---------CCCcEEEEeccccccccC-----CccchHHHHHHHHHHHHHhccCC
Confidence 3569999999988887777776665 566888887765532222 24578888888888888776665
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+..+.|+|+||.++..++..--. ..+.+.-+.+++..+
T Consensus 3758 p~~l~g~s~g~~~a~~~~~~l~~-----~g~~~~~~~~~~~~~ 3795 (3956)
T PRK12467 3758 PYGLLGWSLGGTLARLVAELLER-----EGESEAFLGLFDNTL 3795 (3956)
T ss_pred CeeeeeeecchHHHHHHHHHHHH-----cCCceeEEEEEeccc
Confidence 89999999999999988865322 012566666665443
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.18 Score=42.71 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
..+.+++..+++... +-++.+-|||+||.+|..+|..-
T Consensus 155 ~~~~~~~~~L~~~~~-~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP-NYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcC-CcEEEEecCChHHHHHHHHHHHH
Confidence 567777778787776 44899999999999999888764
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=91.33 E-value=1.2 Score=35.34 Aligned_cols=66 Identities=23% Similarity=0.231 Sum_probs=41.7
Q ss_pred ceEEEEeCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 79 EWRMVLVDLRNH-GRSAEIEGLDPPHDIANAANDLANLVKAK-GWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 79 ~~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
|+.+..+++|.. +--..........+..+=++.+.+.++.. ..+.+++++|+|.|+.++..++.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 567777777761 11000011013456666677777777652 2334899999999999999888765
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.53 Score=42.03 Aligned_cols=62 Identities=27% Similarity=0.351 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccc---cCCccCCcceEEEEecC
Q 020518 104 DIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARAD---YGQFVALPKQLWVLDSV 165 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~---~~~~~~~v~~lvli~~~ 165 (325)
++..-...+...+.+. |-+++++.+||||||.++=.+....-+.. ....-...+++|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 4444444555555544 33468999999999998877665432100 00011145678887765
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=90.56 E-value=1.2 Score=37.44 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=51.2
Q ss_pred EEEEeCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc--C
Q 020518 81 RMVLVDLR-NHGRSAEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY--G 150 (325)
Q Consensus 81 ~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~--~ 150 (325)
+++.+|.| |.|.|...... ...+-++.++|+..+|+.. .-. +++|.|-|.||..+-.+|.+--++.. +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~-~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~-~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPI-DKTGDISEVKRTHEFLQKWLSRHPQYFSN-PLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCCCCCCC-CccccHHHHHHHHHHHHHHHHhCcccccC-CeEEEeeccccchHHHHHHHHHhhccccc
Confidence 78999988 99999754321 1112223446666655542 334 89999999999988877765422110 0
Q ss_pred CccCCcceEEEEecCC
Q 020518 151 QFVALPKQLWVLDSVP 166 (325)
Q Consensus 151 ~~~~~v~~lvli~~~~ 166 (325)
.....++++++-++..
T Consensus 81 ~~~inLkGi~IGNg~t 96 (319)
T PLN02213 81 EPPINLQGYMLGNPVT 96 (319)
T ss_pred CCceeeeEEEeCCCCC
Confidence 0112567887777653
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=90.30 E-value=2.7 Score=37.58 Aligned_cols=77 Identities=17% Similarity=0.066 Sum_probs=53.0
Q ss_pred CceEEEEeCCCCCCCCCC--CCCCCCCCC-----------HHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAE--IEGLDPPHD-----------IANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~--~~~~~~~~~-----------~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
.||.+++=|- ||..+.. ... ...+ +.+.+.--+++++.. ..+ .-+..|.|-||.-++..|
T Consensus 58 ~G~A~~~TD~-Gh~~~~~~~~~~--~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~-~sY~~GcS~GGRqgl~~A 133 (474)
T PF07519_consen 58 RGYATASTDS-GHQGSAGSDDAS--FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPK-YSYFSGCSTGGRQGLMAA 133 (474)
T ss_pred cCeEEEEecC-CCCCCccccccc--ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEeCCCcchHHHHH
Confidence 8999999996 7765543 111 1122 222223334444444 334 689999999999999999
Q ss_pred HHccccccCCccCCcceEEEEecCC
Q 020518 142 QSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 142 ~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++||+ ..++++.-+|..
T Consensus 134 QryP~--------dfDGIlAgaPA~ 150 (474)
T PF07519_consen 134 QRYPE--------DFDGILAGAPAI 150 (474)
T ss_pred HhChh--------hcCeEEeCCchH
Confidence 99999 899999877653
|
It also includes several bacterial homologues of unknown function. |
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.58 Score=37.73 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
-||...+.++.++.++.|-|||+||.+|..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344445556666668999999999999999988873
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.58 Score=37.73 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
-||...+.++.++.++.|-|||+||.+|..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344445556666668999999999999999988873
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=88.03 E-value=19 Score=32.04 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=58.4
Q ss_pred Cce-EEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TST-AFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~-vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+|| .|.+-|+-. ++.|+.+ +..|.. =-.+.-|.|=-|.+--... ..+ -+.+.+-|.+.|++|+
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~----------PfLL~~DpRleGGaFYlGs--~ey-E~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYFMMKRLGA----------PFLLIGDPRLEGGAFYLGS--DEY-EQGIINVIQEKLDYLG 353 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHHHHHhcCC----------CeEEeeccccccceeeeCc--HHH-HHHHHHHHHHHHHHhC
Confidence 444 588888855 6666653 333332 1344558887776644321 122 4456677788889998
Q ss_pred CCC-CEEEEEeChhHHHHHHHHHHc
Q 020518 121 WDW-PDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 121 ~~~-~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
.+. ..+|-|-|||..-|+.|+++.
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccC
Confidence 752 699999999999999999875
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=87.29 E-value=3.1 Score=36.70 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=48.7
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------CC------CCC-ceeEEEecCCCccccccChHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------DG------SEG-KVSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~~------~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
+++||+..|..|-+++....+.+.+.+.-.. +. ... +.+++.+-+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4789999999998888866665544432100 00 002 278889999999996 58999999999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99864
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=87.04 E-value=2.9 Score=36.96 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=48.9
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------CC------CCCc-eeEEEecCCCccccccChHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------DG------SEGK-VSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~~------~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
.+++++..|..|-+++....+.+...++-.. +. ...+ .+++.+-+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4789999999998888766655544443100 00 0123 78889999999996 69999999999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99863
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.62 E-value=1.3 Score=39.65 Aligned_cols=107 Identities=20% Similarity=0.190 Sum_probs=60.0
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV-- 116 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l-- 116 (325)
+++..|+-+||.|. ++..-+...+..+.. -+..|+.+|+-=--... .+..+++..-...=+|
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a-------L~cPiiSVdYSLAPEaP------FPRaleEv~fAYcW~inn 460 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA-------LGCPIISVDYSLAPEAP------FPRALEEVFFAYCWAINN 460 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHH-------hCCCeEEeeeccCCCCC------CCcHHHHHHHHHHHHhcC
Confidence 35667889999876 333334444444543 46799999974222221 2233444332222222
Q ss_pred -HHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 117 -KAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 117 -~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+|.. .+++++|-|.||.+.+-.|.+.-+ ++ ....+++++.-++
T Consensus 461 ~allG~TgEriv~aGDSAGgNL~~~VaLr~i~--~g--vRvPDGl~laY~p 507 (880)
T KOG4388|consen 461 CALLGSTGERIVLAGDSAGGNLCFTVALRAIA--YG--VRVPDGLMLAYPP 507 (880)
T ss_pred HHHhCcccceEEEeccCCCcceeehhHHHHHH--hC--CCCCCceEEecCh
Confidence 344542 289999999999987777766433 11 1134677765543
|
|
| >PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins | Back alignment and domain information |
|---|
Probab=84.30 E-value=6.2 Score=27.96 Aligned_cols=28 Identities=29% Similarity=0.590 Sum_probs=21.0
Q ss_pred CCCCceEEEecCCCCCCCChHH--HHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSGRNWRS--FSRNLA 68 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~~~~--~~~~l~ 68 (325)
.+++|.|+-+||+.|+.-+|-. +++.|-
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly 78 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLY 78 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHH
Confidence 3578999999999999987743 455544
|
Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins ( |
| >PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 | Back alignment and domain information |
|---|
Probab=81.26 E-value=1.2 Score=37.59 Aligned_cols=30 Identities=50% Similarity=0.698 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.++++..|+. +..++|||+|=..|+.++.
T Consensus 74 l~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIK-PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHC-ESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccc-cceeeccchhhHHHHHHCC
Confidence 45666788888 9999999999888886654
|
3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A .... |
| >smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=80.44 E-value=2.3 Score=35.34 Aligned_cols=30 Identities=43% Similarity=0.588 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.+++...|+. +..++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 44556788998 9999999999998887764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 325 | ||||
| 3c5w_P | 310 | Complex Between Pp2a-Specific Methylesterase Pme-1 | 2e-06 | ||
| 3c5v_A | 316 | Pp2a-Specific Methylesterase Apo Form (Pme) Length | 2e-04 |
| >pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 | Back alignment and structure |
|
| >pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme) Length = 316 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 2e-42
Identities = 53/271 (19%), Positives = 96/271 (35%), Gaps = 44/271 (16%)
Query: 49 VLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108
++HGL GS N +R+L + + ++ VD+RNHG S +P +
Sbjct: 21 LVHGLFGSLDNLGVLARDLVN---------DHNIIQVDVRNHGLSPR----EPVMNYPAM 67
Query: 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168
A DL + + A D IGHSMGGK + +L +D P
Sbjct: 68 AQDLVDTLDALQID-KATFIGHSMGGKAVMALT--------ALAPDRIDKLVAIDIAPVD 118
Query: 169 VKTENSEGEVEKVLQTLQSLP-SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
+++ + ++ S +R+ M + + + +++ +
Sbjct: 119 YHVR----RHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSF----VDGE 170
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQG 287
W FN+ +++ Y + W + P + S L +
Sbjct: 171 WRFNVPV---LWDQYPHIVGWEKI--PAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQ-- 223
Query: 288 DGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
HV+ AGHWVH + P +L +
Sbjct: 224 ------ARAHVIAGAGHWVHAEKPDAVLRAI 248
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 7e-35
Identities = 55/284 (19%), Positives = 95/284 (33%), Gaps = 51/284 (17%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HGLLGSG +W+ +LA T + + +DL HG + E + A A
Sbjct: 22 VHGLLGSGADWQPVLSHLART--------QCAALTLDLPGHGTNPER----HCDNFAEAV 69
Query: 110 NDLANLVKAKGWDWPDVV-IGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168
+ V+A V+ +G+S+GG++ +H A L G
Sbjct: 70 EMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGL--AQGAFS------RLNLRGAIIEGGH 121
Query: 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETW 228
+ E Q Q + +E S + + ++L +
Sbjct: 122 FGLQ-ENEEKAARWQHDQQW------AQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLI 174
Query: 229 AFNLDG-AVQMFNSYREMS------YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281
A + + S P L+ + I V E+ + Q+L
Sbjct: 175 AQRSANLGSSVAHMLLATSLAKQPYLLPALQA--LKLPIHYVCGEQDSK-----FQQLAE 227
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
+ +S + AGH VH + P+ +IV I S+
Sbjct: 228 SSG---------LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-32
Identities = 51/274 (18%), Positives = 91/274 (33%), Gaps = 42/274 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD--IAN 107
LHG + W + L + VDL HG SA +
Sbjct: 87 LHGGGQNAHTWDTVIVGLG-----------EPALAVDLPGHGHSAW----REDGNYSPQL 131
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
+ LA +++ + V+G S+GG A+ A A V +L ++D P
Sbjct: 132 NSETLAPVLRELAPG-AEFVVGMSLGGLTAIRLA-----AMAPDLVG---ELVLVDVTPS 182
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEW---IGTNLKKSGE 224
++ ++ L PS + +++ + + + + N ++ +
Sbjct: 183 ALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRR-LD 241
Query: 225 RETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN 284
W + D + L P I +VR S L +
Sbjct: 242 NGNWVWRYDAIRTFGDFAGLWDDVDALSAP-----ITLVRGGSSGFVTDQDTAEL----H 292
Query: 285 RQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
R+ VH++ +GH V D P+ L+EIV
Sbjct: 293 RRATHFR---GVHIVEKSGHSVQSDQPRALIEIV 323
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-31
Identities = 60/284 (21%), Positives = 103/284 (36%), Gaps = 49/284 (17%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD--IAN 107
LHG S +W F+ + + + R+V +DLR+HG + + P D
Sbjct: 44 LHGGGHSALSWAVFTAAII-------SRVQCRIVALDLRSHGETK----VKNPEDLSAET 92
Query: 108 AANDLANLVKAKGWDW--PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165
A D+ N+V+A D P ++IGHSMGG +A+H A V L ++D V
Sbjct: 93 MAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTA-------SSNLVPSLLGLCMIDVV 145
Query: 166 PGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGER 225
G + + L+ P + S + + ++ G ++L + + + +
Sbjct: 146 EGTAM-----DALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQC 200
Query: 226 ETWAFNLDGAVQM-----FNSYREMSYWPLLEHPPQGMEIAI------VRAEKSDRWDPD 274
E + YW + ++ + A
Sbjct: 201 EGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDL 260
Query: 275 VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
I +++G K + VLP GH VH D P + E V
Sbjct: 261 TIGQMQG-----------KFQMQVLPQCGHAVHEDAPDKVAEAV 293
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-25
Identities = 46/277 (16%), Positives = 96/277 (34%), Gaps = 47/277 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG L R + + + + ++ +DL HG D +
Sbjct: 22 LHGFLSDSRTYHNHIEKF---------TDNYHVITIDLPGHGEDQSSM--DETWNFDYIT 70
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
L ++ + G+SMGG+VAL++A + + L + + PG +
Sbjct: 71 TLLDRILDKYKDK-SITLFGYSMGGRVALYYA-----INGHIPI---SNLILESTSPG-I 120
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
K E ++ E V + + VN +L +S E + ++ ++ +
Sbjct: 121 KEEANQLERRLVDDARAKVLDIAGI-ELFVNDWEKLPLFQSQLE-LPVEIQHQIRQQRLS 178
Query: 230 FNLDGAVQMFNSY---REMSYWPLLEHPPQGMEIA----IVRAEKSDRWDPDVIQRL-EG 281
+ + Y + + WP L+ EI I+ E D + +++
Sbjct: 179 QSPHKMAKALRDYGTGQMPNLWPRLK------EIKVPTLILAGEY-DEKFVQIAKKMANL 231
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ N ++ GH +HV++ ++
Sbjct: 232 IPN---------SKCKLISATGHTIHVEDSDEFDTMI 259
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-24
Identities = 29/268 (10%), Positives = 69/268 (25%), Gaps = 35/268 (13%)
Query: 51 HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAN 110
G + N+ + L ++ +D N G S + + N
Sbjct: 50 AGFFSTADNFANIIDKL---------PDSIGILTIDAPNSGYSPVSN--QANVGLRDWVN 98
Query: 111 DLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170
+ + + + ++ HS+GG AL + L+ +
Sbjct: 99 AILMIFEHFKFQ-SYLLCVHSIGGFAALQIM-----NQSSKAC---LGFIGLEPTTVMIY 149
Query: 171 TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAF 230
++ L + + R + + FS + L + +
Sbjct: 150 RAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFK----QLWRGYDYCQRQL 205
Query: 231 NLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGS 290
N ++ F + + + + + + L
Sbjct: 206 NDVQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESF-REKEYLESEYLNKHTQ------ 258
Query: 291 EGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ +L H++H +LE V
Sbjct: 259 ----TKLILCGQHHYLHWSETNSILEKV 282
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 6e-24
Identities = 58/323 (17%), Positives = 109/323 (33%), Gaps = 50/323 (15%)
Query: 30 LAYEEVRSSSDRPYTSTA-----FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVL 84
L Y+ S+ + + TA LHG S W + L + ++ + + + +++L
Sbjct: 33 LTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAID-KVLL 91
Query: 85 VDLRNHGRSAEI--EGLDPPHDIANAANDLANLVKAKGWD-----WPDVVIGHSMGGKVA 137
+D NHG SA L + + A D+ + + +VVIGHSMGG A
Sbjct: 92 IDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQA 151
Query: 138 LHFAQSCARADYGQFVALPKQLWVLDSV--PGKVKTENSEGEVEKVLQTLQSLPSSI--- 192
L L L +++ V K G Q ++L +S+
Sbjct: 152 LACDV--------LQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLK 203
Query: 193 -----PSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE---------TWAFNLDGAVQM 238
+ V +M F + I N+ + ++ A +
Sbjct: 204 TCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNL 263
Query: 239 FNSYREMSYWPLLEHPPQGMEI--AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSV 296
++ P L + + + +S+ P L+ +
Sbjct: 264 LCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN--------YHL 315
Query: 297 HVLPNAGHWVHVDNPKGLLEIVA 319
V+P H V+V+ P ++E +
Sbjct: 316 DVIPGGSHLVNVEAPDLVIERIN 338
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 6e-24
Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 42/273 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
HG+ + + L+ + + VD R HG S + E ++ + A
Sbjct: 74 FHGITSNSAVFEPLMIRLSD---------RFTTIAVDQRGHGLSDKPET---GYEANDYA 121
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+D+A L++ +++GHS+G + ++ A A Y V + +D P +
Sbjct: 122 DDIAGLIRTLARG-HAILVGHSLGARNSVTAA-----AKYPDLVR---SVVAIDFTPY-I 171
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+TE + +E + L I + + + + ++ + +
Sbjct: 172 ETEALDA-LEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPL 230
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDPDVIQRLEGLANR 285
+ Q R P ++ IVR E S + + L
Sbjct: 231 ASSAAMAQTARGLRS-DLVPAYR------DVTKPVLIVRGESSKLVSAAALAKTSRLR-- 281
Query: 286 QGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
V V+P A H+V+ +P+ L+ +
Sbjct: 282 --PDLP----VVVVPGADHYVNEVSPEITLKAI 308
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 1e-23
Identities = 48/290 (16%), Positives = 97/290 (33%), Gaps = 41/290 (14%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR 88
L + RP L GL + R++ LA+ L+ +WR++ ++R
Sbjct: 17 RLHFRAYEGDISRP---PVLCLPGLTRNARDFED----LATRLAG-----DWRVLCPEMR 64
Query: 89 NHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARAD 148
G S + + DL L+ +G + V IG S+GG + + A
Sbjct: 65 GRGDSDYAKDPMT-YQPMQYLQDLEALLAQEGIE-RFVAIGTSLGGLLTMLLA------- 115
Query: 149 YGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFS 208
A + D P + + + ++ + + + + L ++
Sbjct: 116 -AANPARIAAAVLNDVGP--EVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPD 172
Query: 209 KSLSEWIGTNLKKSGERE--TWAFNLDGAV-----QMFNSYREMSYWPLLEHPPQGMEIA 261
+++W+ + AF+ D + + ++ WPL + +
Sbjct: 173 WDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDA-LATRPLL 231
Query: 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
++R E SD ++ V + LP GH +D P
Sbjct: 232 VLRGETSDILSAQTAAKMASRPG---------VELVTLPRIGHAPTLDEP 272
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 6e-23
Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 38/271 (14%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHGL ++ F L S +++ + +DL G S + + P
Sbjct: 27 LHGLSLDKQSTCLFFEPL-------SNVGQYQRIYLDLPGMGNS---DPISPSTSDNVLE 76
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+ + + G ++ GHS GG +A A +++ V
Sbjct: 77 TLIEAIEEIIGAR-RFILYGHSYGGYLAQAIA-----FHLKDQT---LGVFLTCPVIT-- 125
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
++S+ K + L+ + + ++++ + + + + NL G ++
Sbjct: 126 -ADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDK 184
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW-DPDVIQRL-EGLANRQG 287
+ + ++ L++ I+ D+ +L N
Sbjct: 185 ----TFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRN-DQVVGYQEQLKLINHNEN--- 236
Query: 288 DGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ +L GH + +D + +
Sbjct: 237 ------GEIVLLNRTGHNLMIDQREAVGFHF 261
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 5e-20
Identities = 35/284 (12%), Positives = 82/284 (28%), Gaps = 39/284 (13%)
Query: 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87
L+Y + + +D P +L G R ++ + L + +R+++ +
Sbjct: 14 NKLSYIDNQRDTDGP---AILLLPGWCHDHRVYKYLIQELDAD---------FRVIVPNW 61
Query: 88 RNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARA 147
R HG S D ++ G + V HS GG V + +A
Sbjct: 62 RGHGLSPSEVP---DFGYQEQVKDALEILDQLGVETFLPV-SHSHGGWVLVELL---EQA 114
Query: 148 DYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGF 207
+ ++D + + + K L L+ L + ++
Sbjct: 115 ----GPERAPRGIIMDWLMW-----APKPDFAKSLTLLKDPERWREGTHGLFDVWLDGHD 165
Query: 208 SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267
K + + + G + W + + ++ + + I + ++
Sbjct: 166 EKRVRHHLLEEMADYG-YDCWGRSGRVIEDAYGRNGSP--MQMMANLTKTRPIRHIFSQP 222
Query: 268 SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
++ + L H+ +D P
Sbjct: 223 TEPEYEKINSDFAEQH----PWFS----YAKLGGPTHFPAIDVP 258
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 8e-19
Identities = 34/278 (12%), Positives = 80/278 (28%), Gaps = 37/278 (13%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
V H N +F+ + + LV+L+ G S + + +
Sbjct: 27 CVTHLYSEYNDNGNTFANPFTDH---------YSVYLVNLKGCGNSDSAKNDSE-YSMTE 76
Query: 108 AANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
DL + +A + W GHS GG +AL +A + + + ++ V +
Sbjct: 77 TIKDLEAIREALYINKW--GFAGHSAGGMLALVYAT-----EAQESL---TKIIVGGAAA 126
Query: 167 GKVKTENSE---GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSG 223
K + + + S+ +++ + L +L + +
Sbjct: 127 SKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEA 186
Query: 224 ERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ-GMEIAIVRAEKSDRW-DPDVIQRL-E 280
+ + G + E + + + + I + D +
Sbjct: 187 LKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKH-DVQCPYIFSCEIAN 245
Query: 281 GLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ N + + + H V+ + V
Sbjct: 246 LIPN-----AT----LTKFEESNHNPFVEEIDKFNQFV 274
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 5e-18
Identities = 46/287 (16%), Positives = 101/287 (35%), Gaps = 49/287 (17%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS---AEIEGLDPPHDIA 106
+HG+L ++ + +A L A+ +R+V DL HGRS + +A
Sbjct: 32 IHGIL---EQGLAW-QEVALPL----AAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLA 83
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
+ +++ P +++GHSMG +A A K+L +++
Sbjct: 84 ----QIDRVIQELPDQ-PLLLVGHSMGAMLATAIA--------SVRPKKIKELILVELPL 130
Query: 167 G--KVKTENSEGEVEKVLQTLQSLPS--SIPSRKWLVNHMMEL--GFSKSLSEWIGTNLK 220
+ K E++ ++ L L S P P + + + S+ S + +
Sbjct: 131 PAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRIT 190
Query: 221 KSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME-----IAIVRAEKSDRWDPDV 275
+ + ++ D ++ + + + ++ +V + S P+
Sbjct: 191 QPNQ-GGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPED 249
Query: 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322
+Q+ + + L GH +H+D +A I
Sbjct: 250 LQQQKMTMTQ--------AKRVFLS-GGHNLHIDAA----AALASLI 283
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 3e-17
Identities = 43/300 (14%), Positives = 95/300 (31%), Gaps = 72/300 (24%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87
L Y V + + HG + + + ++ +L+DL
Sbjct: 4 MLHYVHV----GNKKSPNTLLFVHGSGCNLKIFGE----------LEKYLEDYNCILLDL 49
Query: 88 RNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD---VVIGHSMGGKVALHFAQSC 144
+ HG S P + +++AN + +IG+SMGG + L A
Sbjct: 50 KGHGES----KGQCPSTVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVA--- 102
Query: 145 ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMME 204
V +++ L + + + ++ + + +L+ +
Sbjct: 103 --LKKLPNV---RKVVSLSGGA-RFDKLDKDF--------MEKIYHNQLDNNYLLECIG- 147
Query: 205 LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA--- 261
G LSE L+K + + + + + L+ I
Sbjct: 148 -GIDNPLSEKYFETLEKDPD---------IMINDLIACKLIDLVDNLK------NIDIPV 191
Query: 262 -IVRAEKSDRW-DPDVIQRL-EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ A+ + + + + + + N SE + + H++ V N KG+ E +
Sbjct: 192 KAIVAKD-ELLTLVEYSEIIKKEVEN-----SE----LKIFETGKHFLLVVNAKGVAEEI 241
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-16
Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 46/271 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG W ++ RN+ + +R++L D +S + A
Sbjct: 39 LHGGGPGAGGWSNYYRNVGPFVDA-----GYRVILKDSPGFNKSDAVV--MDEQRGLVNA 91
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+ L+ A D +V G++MGG AL+FA +Y + +L ++ +
Sbjct: 92 RAVKGLMDALDIDRAHLV-GNAMGGATALNFA-----LEYPDRI---GKLILMGPGG--L 140
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL-SEWIGTNLKKSGERETW 228
+ ++ L L + PS + L + + +SL +E + + W
Sbjct: 141 GPSMFAPMPMEGIKLLFKLYAE-PSYETLKQMLQVFLYDQSLITEEL--------LQGRW 191
Query: 229 AFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE------KSDRW-DPDVIQRL-E 280
+ N PL + ++A+ + DR+ D +L
Sbjct: 192 EAIQRQPEHLKNFLISAQKAPLSTWDVTAR-LGEIKAKTFITWGRDDRFVPLDHGLKLLW 250
Query: 281 GLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ + +HV G W ++
Sbjct: 251 NIDD---------ARLHVFSKCGAWAQWEHA 272
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-16
Identities = 37/269 (13%), Positives = 101/269 (37%), Gaps = 49/269 (18%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG + ++ + L++ +R++ +D+ G++A+ D +
Sbjct: 42 IHGGGAGAESEGNWRNVIP-ILAR-----HYRVIAMDMLGFGKTAKP---DIEYTQDRRI 92
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
L + +KA +D ++G+SMGG L + + + V L ++ S
Sbjct: 93 RHLHDFIKAMNFDGKVSIVGNSMGGATGLGVS-----VLHSELV---NALVLMGSA---- 140
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKS-----LSEWIGTNLKKSGE 224
G V ++ + L+ + + +R+ +V+ + L + T
Sbjct: 141 ------GLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEAT 194
Query: 225 RETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW-DPDVIQRL-EGL 282
R+ + + + + + + ++ P +V+ + D+ + + + +
Sbjct: 195 RKAYVATMQWIREQGGLFYDPEFIRKVQVP-----TLVVQGKD-DKVVPVETAYKFLDLI 248
Query: 283 ANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ +++P+ GHW +++P
Sbjct: 249 DD---------SWGYIIPHCGHWAMIEHP 268
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-16
Identities = 51/277 (18%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG W +FSRN+ + +R++L+D G+S + + A
Sbjct: 42 LHGSGPGATGWANFSRNIDPLVEAG-----YRVILLDCPGWGKSDSVV--NSGSRSDLNA 94
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
L ++V ++G+SMGG ++ F + + V +L ++ G
Sbjct: 95 RILKSVVDQLDIA-KIHLLGNSMGGHSSVAFT-----LKWPERV---GKLVLMGGGTG-- 143
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL-SEWI-----GTNLKKSG 223
+ ++ L L P+ + L M F S ++ + L +
Sbjct: 144 GMSLFTPMPTEGIKRLNQLYRQ-PTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRD 202
Query: 224 ERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP-DVIQRL-EG 281
E + +L+ + F + ++ IV DR+ P D RL G
Sbjct: 203 HLENFVKSLEANPKQFPDFGPR--LAEIKAQ-----TLIVWGRN-DRFVPMDAGLRLLSG 254
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+A +H+ + GHW ++ ++V
Sbjct: 255 IAG---------SELHIFRDCGHWAQWEHADAFNQLV 282
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 7e-16
Identities = 39/268 (14%), Positives = 96/268 (35%), Gaps = 45/268 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG + ++ + LS+ +R++ D+ G + E + + +
Sbjct: 31 IHGSGPGVSAYANWRLTIP-ALSKF-----YRVIAPDMVGFGFTDRPE--NYNYSKDSWV 82
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+ + ++ A + ++G++ GG +A+ A Y + V ++ ++ +
Sbjct: 83 DHIIGIMDALEIE-KAHIVGNAFGGGLAIATA-----LRYSERV---DRMVLMGAA---- 129
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL-SEWIGTNLKKSGERETW 228
G V + L ++ PS + + N + + +SL ++ + ++ + +
Sbjct: 130 ------GTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGF 183
Query: 229 AFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRW-DPDVIQRLEGLA 283
+ MF R+ L + I+ + D+ RL L
Sbjct: 184 ---QESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGRE-DQVVPLSSSLRLGELI 239
Query: 284 NRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
D ++ +HV GHW ++
Sbjct: 240 ----DRAQ----LHVFGRCGHWTQIEQT 259
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-14
Identities = 53/277 (19%), Positives = 88/277 (31%), Gaps = 54/277 (19%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG + WR L+S + + LVDL GRS +A
Sbjct: 19 LHGWGLNAEVWRCIDEELSS---------HFTLHLVDLPGFGRSRGF----GALSLA--- 62
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
D+A V + D + +G S+GG VA A + + V L + S P
Sbjct: 63 -DMAEAVLQQAPD-KAIWLGWSLGGLVASQIA-----LTHPERVR---ALVTVASSPCFS 112
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSR---KWLVNHMMELGFSKSLSEWIGTNLKKSGERE 226
+ G VL Q S R ++L M ++ + LKK+
Sbjct: 113 ARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARA----LKKTVLAL 168
Query: 227 TWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDP-DVIQRLEG 281
+D + + L+ ++ + D P V+ L+
Sbjct: 169 PMP-EVDVLNGGLEILKTVDLRQPLQ------NVSMPFLRLYGYL-DGLVPRKVVPMLDK 220
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
L SE ++ A H + +P ++
Sbjct: 221 LWP----HSE----SYIFAKAAHAPFISHPAEFCHLL 249
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 1e-14
Identities = 47/278 (16%), Positives = 90/278 (32%), Gaps = 45/278 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG W LA + +R++ VD +S++ + A
Sbjct: 52 MHGKNFCAGTWERTIDVLAD--------AGYRVIAVDQVGFCKSSKPA--HYQYSFQQLA 101
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV-PGK 168
+ L++ G VIGHSMGG +A +A Y + V +L +++ +
Sbjct: 102 ANTHALLERLGVA-RASVIGHSMGGMLATRYA-----LLYPRQVE---RLVLVNPIGLED 152
Query: 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGT--NLKKSGERE 226
K S+ R++ + W+ + + RE
Sbjct: 153 WKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRE 212
Query: 227 TWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDPDVIQRLEGL 282
+ A+N +Y + P++ + ++ EK D L
Sbjct: 213 SVAWN------SALTYDMIFTQPVVYELD---RLQMPTLLLIGEK-DNTAIGKDAAPAEL 262
Query: 283 ANRQGDGSE-GKVS--------VHVLPNAGHWVHVDNP 311
R G+ ++ GK + + P+ GH + P
Sbjct: 263 KARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAP 300
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 1e-14
Identities = 53/272 (19%), Positives = 96/272 (35%), Gaps = 47/272 (17%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG +W +FSRN+A L++ + ++ VD +G S + + AA
Sbjct: 42 LHGGGPGAASWTNFSRNIAV-LARH-----FHVLAVDQPGYGHSDKRA--EHGQFNRYAA 93
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
L L G ++G+++GG A+ FA DY +L ++ PG +
Sbjct: 94 MALKGLFDQLGLG-RVPLVGNALGGGTAVRFA-----LDYPARA---GRLVLMG--PGGL 142
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL--SEWIGTNLKKSGERET 227
+ + ++ L + P+R+ L + + + K+L E + + E+
Sbjct: 143 SINLFAPDPTEGVKRLSKFSVA-PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPES 201
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE------KSDRW-DPDVIQRL- 279
M S+ E E+ +R + DR D
Sbjct: 202 LTATRA----MGKSFA----GADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVAL 253
Query: 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ + +HV GHWV V+
Sbjct: 254 KTIPR---------AQLHVFGQCGHWVQVEKF 276
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 1e-14
Identities = 40/311 (12%), Positives = 87/311 (27%), Gaps = 55/311 (17%)
Query: 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN 89
+ + +P+ VLHG G N+ + LA + ++ D
Sbjct: 40 TWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALA-------DETGRTVIHYDQVG 92
Query: 90 HGRSAEIEGLDPPH-DIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARA 147
G S + ++ + A G + + V+G S GG + A
Sbjct: 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERY--HVLGQSWGGMLGAEIA-----V 145
Query: 148 DYGQFVALPKQLWVLDSVPGKVKTENS----------EGEVEKVLQTLQSLPSSIPSRKW 197
+ L + + P ++ + + + + + P
Sbjct: 146 RQPSGL---VSL-AICNSPASMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQ 201
Query: 198 LVNHMME---LGFSKSLSEWIGTNLKKSGERETW-AFNLDGAVQMFNSYREMSYWPLLEH 253
+ ++ + + E + N + + + S L
Sbjct: 202 AAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLP- 260
Query: 254 PPQGMEIA----IVRAEKSDRWDPDVIQRL-EGLANRQGDGSEGKVSVHVLPNAGHWVHV 308
++ ++ E D P Q + + + V HV P H H+
Sbjct: 261 -----DVTAPVLVIAGEH-DEATPKTWQPFVDHIPD---------VRSHVFPGTSHCTHL 305
Query: 309 DNPKGLLEIVA 319
+ P+ +VA
Sbjct: 306 EKPEEFRAVVA 316
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 3e-14
Identities = 36/262 (13%), Positives = 71/262 (27%), Gaps = 37/262 (14%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
L G R ++ NLA L++ + ++ D R H G D A
Sbjct: 27 LSGWCQDHRLFK----NLAPLLARD-----FHVICPDWRGHDAKQTDSG---DFDSQTLA 74
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
DL + AKG ++ S G V + + A + + ++D +
Sbjct: 75 QDLLAFIDAKGIR-DFQMVSTSHGCWVNIDVCEQLGAARLPKTI-------IIDWLLQ-- 124
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+ L Q + R+ + E + + + + E W
Sbjct: 125 ----PHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFH-GEMWQ 179
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
+ ++ + + +LE A
Sbjct: 180 RACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQ----PLSQDYRQLQLEFAAGHSW-- 233
Query: 290 SEGKVSVHVLPNAGHWVHVDNP 311
+P H+ ++NP
Sbjct: 234 ----FHPRHIPGRTHFPSLENP 251
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 9e-14
Identities = 42/272 (15%), Positives = 87/272 (31%), Gaps = 45/272 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--PPHDIAN 107
LHG ++ + L++ + +V DL G+S E +
Sbjct: 35 LHGAGPGAHAASNWRPIIP-DLAEN-----FFVVAPDLIGFGQSEYPETYPGHIMSWVGM 88
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
+ L+ G + +V G+SMGG V L + + ++ ++ SV
Sbjct: 89 RVEQILGLMNHFGIEKSHIV-GNSMGGAVTLQLV-----VEAPERFD---KVALMGSVGA 139
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
+ E L + P P R+ + + + + + E + + + + + E
Sbjct: 140 PMNARPPELA---RLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEV 196
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE------KSDRW-DPDVIQRL- 279
MF S + ++ + + + + DR D L
Sbjct: 197 RRI----QEVMFESMKAGMESLVIPPA----TLGRLPHDVLVFHGRQDRIVPLDTSLYLT 248
Query: 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ L + + VL GHW ++
Sbjct: 249 KHLKH---------AELVVLDRCGHWAQLERW 271
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-13
Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 60/270 (22%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
+L G+LGSG F L + L++ + +V D R +G S + P
Sbjct: 27 LLLPGMLGSG--ETDFGPQLKN-LNK----KLFTVVAWDPRGYGHSRPPDRDFPADFFER 79
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
A D +L+KA + ++ G S GG AL A A Y ++ ++ + +
Sbjct: 80 DAKDAVDLMKALKFKKVSLL-GWSDGGITALIAA-----AKYPSYI---HKMVIWGANAY 130
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
+ + + + ++ + +RK L F+++ +W+
Sbjct: 131 ---VTDEDSMIYEGIRDVSKWSE--RTRKPLEALYGYDYFARTCEKWV------------ 173
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDP-DVIQRL-EG 281
DG Q + LL + IV EK D P + +
Sbjct: 174 -----DGIRQFKHLPDGNICRHLLP------RVQCPALIVHGEK-DPLVPRFHADFIHKH 221
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ S +H++P H +H+
Sbjct: 222 VKG-----SR----LHLMPEGKHNLHLRFA 242
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-13
Identities = 47/273 (17%), Positives = 87/273 (31%), Gaps = 48/273 (17%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
HG + +W S LA+ +R++ D R HGRS++ +D+ A
Sbjct: 25 SHGWPLNADSWESQMIFLAA--------QGYRVIAHDRRGHGRSSQPWS---GNDMDTYA 73
Query: 110 NDLANLVKAKGWDWPDVV-IGHSMGGKVALHFAQSCARADYGQFVAL------PKQLWVL 162
+DLA L++ D D V G S GG + R + P +
Sbjct: 74 DDLAQLIEH--LDLRDAVLFGFSTGGGEVARYI---GRHGTARVAKAGLISAVPPLMLKT 128
Query: 163 DSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKS 222
++ PG + E +G + L L + S + + S + +W
Sbjct: 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWF------- 181
Query: 223 GERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDPDVIQR 278
+ A A ++ E + L+ +I +V + +
Sbjct: 182 -WLQGMAAGHKNAYDCIKAFSETDFTEDLK------KIDVPTLVVHGDADQVVPIEASGI 234
Query: 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
+ GS + + A H + +
Sbjct: 235 ---ASAALVKGST----LKIYSGAPHGLTDTHK 260
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 3e-13
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 15/92 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+ G L + + LA + ++ D R G S + PP+ +
Sbjct: 29 VGGALSTRAGGAPLAERLAP---------HFTVICYDRRGRGDSGD----TPPYAVEREI 75
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
DLA ++ A G V G S G ++L A
Sbjct: 76 EDLAAIIDAAGG--AAFVFGMSSGAGLSLLAA 105
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 1e-12
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR 88
+ ++ + S+R + + HG + +W +L + + + + D
Sbjct: 15 RVFQRKMVTDSNRR---SIALFHGYSFTSMDWDK--ADLFNNY----SKIGYNVYAPDYP 65
Query: 89 NHGRSAEIEGLDPP-HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
GRSA E D+ +AA + + +KA G V++G SMGG + +
Sbjct: 66 GFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVA-RSVIMGASMGGGMVIMTT 118
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 4e-12
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 9/114 (7%)
Query: 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87
Q L + E + +LHG+ S W++ A + +R V +DL
Sbjct: 17 QALFFREALPG-SGQARFSVLLLHGIRFSSETWQNLGTLHRL------AQAGYRAVAIDL 69
Query: 88 RNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
G S E P + LA +V A P VVI S+ G +L F
Sbjct: 70 PGLGHSKEAAA-PAPIGELAPGSFLAAVVDALELGPP-VVISPSLSGMYSLPFL 121
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 4e-12
Identities = 50/274 (18%), Positives = 90/274 (32%), Gaps = 52/274 (18%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
HG L W L+S +R + D R GRS + +D A
Sbjct: 25 SHGWLLDADMWEYQMEYLSS--------RGYRTIAFDRRGFGRSDQPWT---GNDYDTFA 73
Query: 110 NDLANLVKAKGWDWPDVV-IGHSMGGKVALHFAQSCARADYGQFVALPKQLWVL-DSV-P 166
+D+A L++ D +V +G SMGG + AR + L VL +V P
Sbjct: 74 DDIAQLIEH--LDLKEVTLVGFSMGGGDVARY---IARHGSARVAGL-----VLLGAVTP 123
Query: 167 GKVKTE-NSEGEVEKVLQTLQSLPSSIPSR--KWLVNHMMELGFSKSLSEWIGTNLKKSG 223
+ +G V ++ ++ + + +S+ + T +
Sbjct: 124 LFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIA 183
Query: 224 ERETWAFNLDGAVQMFNSYREMSYWPLLE--HPP----QGMEIAIVRAEKSDRWDPDVIQ 277
+ V ++ E + P + P G IV E + + ++I+
Sbjct: 184 LLASLK----ATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIK 239
Query: 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
G+E + V +A H V +
Sbjct: 240 -----------GAE----LKVYKDAPHGFAVTHA 258
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 5e-12
Identities = 32/160 (20%), Positives = 48/160 (30%), Gaps = 33/160 (20%)
Query: 3 RILKNRHNSLNLLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTS----TAFV--------- 49
+I + H+ N + Y E S S T F
Sbjct: 5 KIHHHHHHMSNHSSSIPELSDNGIRYYQTYNESLSLWPVRCKSFYISTRFGQTHVIASGP 64
Query: 50 --------LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP 101
LHG L S W N+A S +R VD+ + E
Sbjct: 65 EDAPPLVLLHGALFSSTMWY---PNIA-DWSSK-----YRTYAVDIIGDKNKSIPEN--V 113
Query: 102 PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+ AN L ++ G + +IG S+GG ++F
Sbjct: 114 SGTRTDYANWLLDVFDNLGIE-KSHMIGLSLGGLHTMNFL 152
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 7e-12
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 17/119 (14%)
Query: 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRM 82
T +LAY + ++++P + + + + W + L++ +R+
Sbjct: 10 ATSDGASLAYR-LDGAAEKP---LLALSNSIGTTLHMWDA----QLPALTR-----HFRV 56
Query: 83 VLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+ D R HG S+ G P+ +A D+ L+ A +G S+GG V A
Sbjct: 57 LRYDARGHGASSVPPG---PYTLARLGEDVLELLDALEVR-RAHFLGLSLGGIVGQWLA 111
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 7e-12
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+ GL GSG W + L Q E+++V D R G + + L + IA A
Sbjct: 21 ISGLGGSGSYWLP----QLAVLEQ-----EYQVVCYDQRGTGNNPDT--LAEDYSIAQMA 69
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+L + A G + V+GH++G V + A
Sbjct: 70 AELHQALVAAGIE-HYAVVGHALGALVGMQLA 100
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 8e-12
Identities = 51/320 (15%), Positives = 92/320 (28%), Gaps = 57/320 (17%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVL--HGLLGSGRNWRS-FSRNLASTLSQTSASSEWRMVLV 85
L ++ +D +L G S W F+R LA ++
Sbjct: 12 ELWSDDFGDPADPA------LLLVMGGNLSALGWPDEFARRLAD--------GGLHVIRY 57
Query: 86 DLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145
D R+ GRS + P+ A D ++ G D V+G SMG + A
Sbjct: 58 DHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVD-RAHVVGLSMGATITQVIA---- 112
Query: 146 RADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMEL 205
D+ ++ L +L + + + V + TL LP P + +L +
Sbjct: 113 -LDHHDRLS---SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG--PQQPFLDALALMN 166
Query: 206 GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME--IAIV 263
++ + + + K D + + E + + +
Sbjct: 167 QPAEGRAAEVAKRVSKWRILSGTGVPFD--DAEYARWEERAIDHAGGVLAEPYAHYSLTL 224
Query: 264 RAEKSDRWD-------P--------DVIQRLEG---LANRQGDGSEGKVSVHVLPNAGHW 305
R P D I LA + + +P GH
Sbjct: 225 PPP--SRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGL-IPTAR----LAEIPGMGHA 277
Query: 306 VHVDNPKGLLEIVAPRIASV 325
+ L E++ S
Sbjct: 278 LPSSVHGPLAEVILAHTRSA 297
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 1e-11
Identities = 50/365 (13%), Positives = 97/365 (26%), Gaps = 106/365 (29%)
Query: 14 LLTRFLNSPTTRSLQTLAYEEVRS---SSDRPYT----------------------STAF 48
L++ S+ T Y E R + ++ + +
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 49 VLHGLLGSGRNW------RSFSRNLAS-------TLSQTSASSEWRMVLVDLRNHGRSAE 95
++ G+LGSG+ W S+ L ++ +L L
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 96 IEGLD----PPHDIANAANDLANLVKAKG-----------WDWPDVVIGHSMGGKVALHF 140
D I + +L L+K+K + K F
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA-----------KAWNAF 262
Query: 141 AQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL----------PS 190
SC + + + V D + T S L + P
Sbjct: 263 NLSC------KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 191 SIPSRKWLVNHMMELGFSKSLSEWIGT--NLKKSGERETWAFNLDGAVQMF------NSY 242
+P N ++S+ + + T N K + L ++ Y
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK-----LTTIIESSLNVLEPAEY 371
Query: 243 REMSYWPLL---EH---PPQGMEIAIVRAEKSDRWDPDVIQRLE--GLANRQGDGSEGKV 294
R+M + L P + ++ + V+ +L L +Q E +
Sbjct: 372 RKM-FDRLSVFPPSAHIPTILLS--LIWFDVIKSDVMVVVNKLHKYSLVEKQPK--ESTI 426
Query: 295 SVHVL 299
S+ +
Sbjct: 427 SIPSI 431
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 25/116 (21%), Positives = 37/116 (31%), Gaps = 19/116 (16%)
Query: 28 QTLAYE-EVRSSSDRPYTSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLV 85
L Y + + P VL + L W L+ +R++
Sbjct: 12 TELHYRIDGERHGNAP----WIVLSNSLGTDLSMWAPQVAALSK---------HFRVLRY 58
Query: 86 DLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
D R HG S +G P+ I D+ L+ G SMGG + A
Sbjct: 59 DTRGHGHSEAPKG---PYTIEQLTGDVLGLMDTLKIA-RANFCGLSMGGLTGVALA 110
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-11
Identities = 41/270 (15%), Positives = 97/270 (35%), Gaps = 42/270 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG SGR+W L + +R++ D R G+S++ ++
Sbjct: 33 IHGWPLSGRSWEYQVPALVE--------AGYRVITYDRRGFGKSSQPWE---GYEYDTFT 81
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV-PGK 168
+DL L++ ++G SMGG + + YG +++ +V P
Sbjct: 82 SDLHQLLEQLELQNV-TLVGFSMGGGEVARYI-----STYGT--DRIEKVVFAGAVPPYL 133
Query: 169 VKTE-NSEGEVEK-VLQTLQSLPSSIPSRKWLVNHMMELGFSKS-LSEWIGTNLKKSGER 225
K+E + EG ++ ++T +S I R ++ + F+ ++ + + +
Sbjct: 134 YKSEDHPEGALDDATIETFKSGV--INDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWD 191
Query: 226 ETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDPDVIQRLEG 281
+ G + ++ + + LE + I+ + + +
Sbjct: 192 IAAGASPKGTLDCITAFSKTDFRKDLE------KFNIPTLIIHGDSDATVPFEYSGK--- 242
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311
L + S+ V ++ H ++ +
Sbjct: 243 LTHEAIPNSK----VALIKGGPHGLNATHA 268
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 5e-11
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 11/93 (11%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS-AEIEGLDPPHDIANA 108
G W + +A + R++L D G S L+ +
Sbjct: 26 APGFGCDQSVWNA----VAPAFEED-----HRVILFDYVGSGHSDLRAYDLNRYQTLDGY 76
Query: 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
A D+ ++ +A V +GHS+G + + +
Sbjct: 77 AQDVLDVCEALDLK-ETVFVGHSVGALIGMLAS 108
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-11
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+ G G+GR W + + L+ +R + D R G + EG
Sbjct: 49 IAGRGGAGRTWHP--HQVPAFLAA-----GYRCITFDNRGIGATENAEG----FTTQTMV 97
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
D A L++ P V+G SMG +A
Sbjct: 98 ADTAALIETLDIA-PARVVGVSMGAFIAQELM 128
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 7e-11
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 14/93 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG +G W+ + + +R + D R HG S + +D A
Sbjct: 25 IHGWPLNGDAWQDQLKAVVDA--------GYRGIAHDRRGHGHSTPVWD---GYDFDTFA 73
Query: 110 NDLANLVKAKGWDWPDVV-IGHSMGGKVALHFA 141
+DL +L+ D DV + HSMGG +
Sbjct: 74 DDLNDLLTD--LDLRDVTLVAHSMGGGELARYV 104
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 8e-11
Identities = 27/115 (23%), Positives = 38/115 (33%), Gaps = 15/115 (13%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR 88
L E+V FVLHG G L +R+V D R
Sbjct: 14 ELYVEDVGPVEGPA----LFVLHGGPGGNAYV--LREGLQD------YLEGFRVVYFDQR 61
Query: 89 NHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQ 142
GRS E+ + D L +A G + + ++ H G VAL +
Sbjct: 62 GSGRSLELPQDPRLFTVDALVEDTLLLAEALGVERF--GLLAHGFGAVVALEVLR 114
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-10
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSA--SSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
HG S +W + Q + +R+V D R HGRS+++ HD+ +
Sbjct: 28 HHGWPLSADDWDA----------QLLFFLAHGYRVVAHDRRGHGRSSQVWD---GHDMDH 74
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
A+D+A +V G V +GHS GG + +
Sbjct: 75 YADDVAAVVAHLGIQGA-VHVGHSTGGGEVVRYM 107
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 3e-10
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG G +W +R L + +R++ D R G S+++ +D A
Sbjct: 29 IHGYPLDGHSWERQTRELLA--------QGYRVITYDRRGFGGSSKVNT---GYDYDTFA 77
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
DL +++ V++G SMG +
Sbjct: 78 ADLHTVLETLDLR-DVVLVGFSMGTGELARYV 108
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 5e-10
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 15/95 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSA-SSEWRMVLVDLRNHGRS-AEIEGLDPPHDIAN 107
HG WR ++ +++ D G+S E +
Sbjct: 34 AHGFGCDQNMWRF----------MLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEG 83
Query: 108 AANDLANLVKAKGWDWPDVV-IGHSMGGKVALHFA 141
A D+ ++ A +V IGHS+ +A +
Sbjct: 84 YAKDVEEILVALDLV--NVSIIGHSVSSIIAGIAS 116
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 6e-10
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 18/95 (18%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTS--ASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
+HG SG +W Q++ + +R++ D R G+S++ +D
Sbjct: 30 IHGFPLSGHSWER----------QSAALLDAGYRVITYDRRGFGQSSQPTT---GYDYDT 76
Query: 108 AANDLANLVKAKGWDWPDVV-IGHSMGGKVALHFA 141
A DL +++ D D V +G SMG +
Sbjct: 77 FAADLNTVLET--LDLQDAVLVGFSMGTGEVARYV 109
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-10
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 9/96 (9%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
+LHG G+ + R R L S + + HG E P D
Sbjct: 20 LLLHGFTGNSADVRMLGRFLES--------KGYTCHAPIYKGHGVPPEELVHTGPDDWWQ 71
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143
+ +K KG++ V G S+GG +L +
Sbjct: 72 DVMNGYEFLKNKGYE-KIAVAGLSLGGVFSLKLGYT 106
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 9e-10
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 18/95 (18%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTS--ASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
+HG SG +W Q++ + +R++ D R G+S++ +D
Sbjct: 29 IHGFPLSGHSWER----------QSAALLDAGYRVITYDRRGFGQSSQPTT---GYDYDT 75
Query: 108 AANDLANLVKAKGWDWPDVV-IGHSMGGKVALHFA 141
A DL +++ D D V +G S G +
Sbjct: 76 FAADLNTVLET--LDLQDAVLVGFSTGTGEVARYV 108
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 1e-09
Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 23/119 (19%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR 88
+ Y+ ++ ++ +HG G ++ R++ ++ D
Sbjct: 16 YIYYKLCKAPEEKA---KLMTMHGGPGMSHDYLLSLRDMTK--------EGITVLFYDQF 64
Query: 89 NHGRSAEIEGLDPPHDIAN----AANDLANLVKA-KGWDWPDVVIGHSMGGKVALHFAQ 142
GRS + P + L G + ++G S GG +AL +A
Sbjct: 65 GCGRS------EEPDQSKFTIDYGVEEAEALRSKLFGNEKV-FLMGSSYGGALALAYAV 116
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 2e-09
Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 65/295 (22%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH---DIA 106
+HG G+ W + L L++ + ++ DL G+S +PP
Sbjct: 36 VHGF---GQTWYEW-HQLMPELAKR-----FTVIAPDLPGLGQS------EPPKTGYSGE 80
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDS-V 165
A L L + D P ++ H +G + +L +++ +
Sbjct: 81 QVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMV-----VKNQADI---ARLVYMEAPI 132
Query: 166 PGKVKTENSEGEVEKVLQT----LQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKK 221
P + + + E + ++ +K
Sbjct: 133 PDARIYRFPAFTAQGESLVWHFSFFAADDRLA----------ETLIAGKERFFLEHFIKS 182
Query: 222 SGERETW-----------AFNLDGAVQ-MFNSYREMSYWPLLEHPPQGMEIAI----VRA 265
++ ++ F YR ++ + + +
Sbjct: 183 HASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAG 242
Query: 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
+ +++++ A V HVLP GHW+ + + +V
Sbjct: 243 GGAGGMGTFQLEQMKAYAED--------VEGHVLPGCGHWLPEECAAPMNRLVID 289
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 8e-09
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
HG S +W + S +R++ D R HGRS + HD+ A
Sbjct: 27 HHGWPLSADDWDNQMLFFLS--------HGYRVIAHDRRGHGRSDQPST---GHDMDTYA 75
Query: 110 NDLANLVKAKGWDWPDVV-IGHSMGG-KVALHFAQ 142
D+A L +A D V IGHS GG +VA + A+
Sbjct: 76 ADVAALTEA--LDLRGAVHIGHSTGGGEVARYVAR 108
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 53.4 bits (127), Expect = 3e-08
Identities = 33/235 (14%), Positives = 70/235 (29%), Gaps = 22/235 (9%)
Query: 38 SSDRPYTSTAFVLHGLLGSGRNW--------RSFSRNLASTLSQTSASSEWRMVLVDLRN 89
+ +L G SG + ++ A + + + +D R
Sbjct: 44 NLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRT 103
Query: 90 HGRSAEIEGLDPP----HDIANAANDLANLVKAKGWDWPD---VVIGHSMGGKVALHFAQ 142
H ++ + +D+ +V D + G S GG AL+++
Sbjct: 104 HYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSS 163
Query: 143 SCARADYGQFVAL---PKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199
+ D + L P + + E E + + + P + +
Sbjct: 164 LYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYAL 223
Query: 200 NHMMELGFS---KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-YREMSYWPL 250
+ KS+S+++ +L +G + + MF YWP
Sbjct: 224 ANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPY 278
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-07
Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 22/112 (19%)
Query: 49 VLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108
++HG+ G+ N+ L S W + + N
Sbjct: 8 MVHGIGGASFNFAGIKSYLVS--------QGWSRDKLYAVDFWD--------KTGTNYNN 51
Query: 109 ANDLANLV----KAKGWDWPDVVIGHSMGGKVALHFAQSCARADY-GQFVAL 155
L+ V G D+V HSMGG L++ ++ + V L
Sbjct: 52 GPVLSRFVQKVLDETGAKKVDIV-AHSMGGANTLYYIKNLDGGNKVANVVTL 102
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A Length = 242 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 39/280 (13%), Positives = 77/280 (27%), Gaps = 63/280 (22%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
G ++R L E M+ + HG + D+
Sbjct: 17 ICFPFAGGYSASFRPLHAFL---------QGECEMLAAEPPGHGTNQT----SAIEDLEE 63
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
+ + + D P V+ GHSMGG + AQ R + Q ++
Sbjct: 64 LTDLYKQELNLR-PDRPFVLFGHSMGGMITFRLAQKLEREG------IFPQAVII----- 111
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
S ++ V+H+ + F + + G + +E
Sbjct: 112 -------------------SAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEV 152
Query: 228 WAFNLDGA---VQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN 284
+F L + + ++ P + + D I+ EG
Sbjct: 153 MSFFLPSFRSDYRALEQFELYDLAQ-IQSP-----VHVFNGLD----DKKCIRDAEGWKK 202
Query: 285 RQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
D ++ H GH + + + E + +
Sbjct: 203 WAKD-----ITFHQFD-GGHMFLLSQTEEVAERIFAILNQ 236
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
++HG G+ + R + A + + + L L+ HG E HD
Sbjct: 44 LLVHGFTGTPHSMRPLAEAYAK--------AGYTVCLPRLKGHGTHYEDMERTTFHDWVA 95
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
+ + +K + V G SMGG + L+ A+
Sbjct: 96 SVEEGYGWLKQRCQ--TIFVTGLSMGGTLTLYLAE 128
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 49.8 bits (118), Expect = 3e-07
Identities = 37/276 (13%), Positives = 87/276 (31%), Gaps = 39/276 (14%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE-IEGLDPPHDIA 106
F H + + ++ + V VD A +
Sbjct: 39 FTYHDVGLNYKSCFQPLFRFGD---MQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLD 95
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
A+ + +++ + + +G G + +A ++ V + L +++ P
Sbjct: 96 QLADMIPCILQYLNFSTI-IGVGVGAGAYILSRYA-----LNHPDTV---EGLVLINIDP 146
Query: 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE 226
N++G ++ L L SSIP ++ H+ SE I + +
Sbjct: 147 ------NAKGWMDWAAHKLTGLTSSIP--DMILGHLFSQEELSGNSELIQK-YRGIIQHA 197
Query: 227 TWAFNLDGAVQMFNSYREMSYW----PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282
N++ +N+ R++++ L+ P ++ + V++ L
Sbjct: 198 PNLENIELYWNSYNNRRDLNFERGGETTLKCP------VMLVVGDQAPHEDAVVECNSKL 251
Query: 283 ANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ S + ++G + P L E
Sbjct: 252 DPT-------QTSFLKMADSGGQPQLTQPGKLTEAF 280
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 7e-07
Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 13/102 (12%)
Query: 44 TSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP- 101
T T VL H GS + +R L S + + + HG ++ L
Sbjct: 21 TDTGVVLLHAYTGSPNDMNFMARALQR--------SGYGVYVPLFSGHGTVEPLDILTKG 72
Query: 102 -PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
P ++ + AK V G S+GG A+ +
Sbjct: 73 NPDIWWAESSAAVAHMTAKYA--KVFVFGLSLGGIFAMKALE 112
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 9e-07
Identities = 14/97 (14%), Positives = 28/97 (28%), Gaps = 9/97 (9%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
+ HG + L++ + W D + ++ L
Sbjct: 6 HCILAHGFESGPDA------LKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRG- 58
Query: 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
L + +A P V+ G S+G +A +
Sbjct: 59 --RLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSL 93
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 17/100 (17%)
Query: 48 FVLHGLLG--SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
FV HG G SGR LA L + + D HG+S + D
Sbjct: 64 FVSHGA-GEHSGRY-----EELARML----MGLDLLVFAHDHVGHGQSEGERMVVS--DF 111
Query: 106 ANAANDLANLVKAKGWDWPDV---VIGHSMGGKVALHFAQ 142
D+ V + D+P + ++GHSMGG +A+ A
Sbjct: 112 HVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAA 151
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 4e-06
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 17/100 (17%)
Query: 48 FVLHGLLG--SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
FV HG G SGR LA L + + D HG+S + D
Sbjct: 46 FVSHGA-GEHSGRY-----EELARML----MGLDLLVFAHDHVGHGQSEGERMVVS--DF 93
Query: 106 ANAANDLANLVKAKGWDWPDV---VIGHSMGGKVALHFAQ 142
D+ V + D+P + ++GHSMGG +A+ A
Sbjct: 94 HVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAA 133
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 5e-06
Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 12/100 (12%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
A + HG + RN ++ + V D HG S +G +
Sbjct: 48 MAIIFHGF-TANRNTSLLRE-----IANSLRDENIASVRFDFNGHGDS---DGKFENMTV 98
Query: 106 ANAANDL---ANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
N D N VK ++GH+ GG VA A
Sbjct: 99 LNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAG 138
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 5e-06
Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 48/288 (16%)
Query: 48 FVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106
FVL HG W L S + ++ VDL G + LD H
Sbjct: 13 FVLVHGGCLGAWIWYKLKPLLES--------AGHKVTAVDLSAAGINPR--RLDEIHTFR 62
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
+ + L ++ + D V++GHS GG A Y + ++ +++ +P
Sbjct: 63 DYSEPLMEVMASIPPDEKVVLLGHSFGGMSL-----GLAMETYPEKIS--VAVFMSAMMP 115
Query: 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE 226
+ + P+ L + G ++ + L
Sbjct: 116 ---------DPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENP--GMSMILGPQFMAL 164
Query: 227 TWAFNLDGAVQMFNSYRE----MSYWPLLEHPPQGMEI------AIVRAEKSDRWDPDVI 276
N + + L + E A + + D+ P
Sbjct: 165 KMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNE-DKSFPVEF 223
Query: 277 QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
Q+ G V + A H + P+ + + + I+
Sbjct: 224 QKW--FVESVGA-----DKVKEIKEADHMGMLSQPREVCKCLL-DISD 263
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* Length = 267 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 7e-06
Identities = 41/281 (14%), Positives = 74/281 (26%), Gaps = 60/281 (21%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPPHDIA 106
L GS + ++ L + ++ V R E P I
Sbjct: 24 VCLPHAGGSASFFFPLAKAL---------APAVEVLAVQYPGRQDRRHE----PPVDSIG 70
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
N L +++ G D P + GHSMG + A + P L+
Sbjct: 71 GLTNRLLEVLRPFG-DRPLALFGHSMGAIIGYELALRMPE----AGLPAPVHLFASGRRA 125
Query: 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTN---LKKSG 223
PS + L + G++ L
Sbjct: 126 ----------------------PSRYRDDDVR--GASDERLVAELRKLGGSDAAMLADPE 161
Query: 224 ERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLA 283
+ + +YR ++ P + + + R + E
Sbjct: 162 LLAMVLPAIRSDYRAVETYRHEPGRR-VDCP-----VTVFTGDHDPRVSVGEARAWEEHT 215
Query: 284 NRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
G + VLP GH+ VD ++ + ++A
Sbjct: 216 -------TGPADLRVLP-GGHFFLVDQAAPMIATMTEKLAG 248
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 8e-06
Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 18/90 (20%)
Query: 53 LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL 112
+ W L + + L+DL +GR+ P A+ +
Sbjct: 28 VAEEASRWPE-------ALPEG-----YAFYLLDLPGYGRTE-----GPRMAPEELAHFV 70
Query: 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
A P V+ +G + H
Sbjct: 71 AGFAVMMNLGAP-WVLLRGLGLALGPHLEA 99
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 9e-06
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 48 FVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106
FVL HG G +W L + + ++ +DL G ++ +
Sbjct: 7 FVLVHGACHGGWSWYKLKPLLEA--------AGHKVTALDLAASGTDLR--KIEELRTLY 56
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVA 137
+ L L+++ D +++GHS+GG
Sbjct: 57 DYTLPLMELMESLSADEKVILVGHSLGGMNL 87
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 72/300 (24%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP-PHDIANA 108
LHG W + + L++ + +++ DLR G S + + D + + A
Sbjct: 35 LHGW---PGFWWEW-SKVIGPLAE-----HYDVIVPDLRGFGDSEKPDLNDLSKYSLDKA 85
Query: 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168
A+D A L+ A G + V+GH V F Y V + + D +
Sbjct: 86 ADDQAALLDALGIE-KAYVVGHDFAAIVLHKFI-----RKYSDRV---IKAAIFDPIQPD 136
Query: 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM----------MELGFSKSLSEWIGTN 218
+ + + ++
Sbjct: 137 FGPVYFG-----------------LGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHF 179
Query: 219 LKKSGERETW-----------AFNLDGAVQ-MFNSYREM-SYWPLLEHPPQGMEIAI--- 262
R+ + FN YR L +
Sbjct: 180 FDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVT 239
Query: 263 -VRAEKSD-RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
+ +I+ + + ++ + + GH++ V+ P+ ++ +
Sbjct: 240 MIWGLGDTCVPYAPLIEFVPKYYS--------NYTMETIEDCGHFLMVEKPEIAIDRIKT 291
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 3e-05
Identities = 53/305 (17%), Positives = 87/305 (28%), Gaps = 72/305 (23%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
+ HG S +WR LA + +R++ +D++ +G S P +I
Sbjct: 260 AVCLCHGFPESWYSWRYQIPALAQ--------AGYRVLAMDMKGYGES------SAPPEI 305
Query: 106 A-----NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ------------SC---A 145
++ + G V IGH GG + + A +
Sbjct: 306 EEYCMEVLCKEMVTFLDKLGLS-QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIP 364
Query: 146 RADYGQFVALPKQLWVLD-----SVPG---KVKTENSEGEVEKVLQTLQSLPSSIPSRKW 197
+ K V D PG +N + + + S+
Sbjct: 365 ANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCE 424
Query: 198 LVNHMMELGFSKSLSEWIGTNLKKSGERETW----AFNLDGAVQMFNSYREMSYWPLLEH 253
+ SLS + E E F G N YR M
Sbjct: 425 AGGLFVNSPEEPSLSRMVT-------EEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWAC 477
Query: 254 PPQGMEIAI----VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVS---VHVLPNAGHWV 306
G +I I V AEK D ++ ++ E + + + GHW
Sbjct: 478 KSLGRKILIPALMVTAEK----DFVLVPQM-------SQHMEDWIPHLKRGHIEDCGHWT 526
Query: 307 HVDNP 311
+D P
Sbjct: 527 QMDKP 531
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 12/99 (12%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
++HG R + +T + D+ HG+S +G H +
Sbjct: 29 LCIIIHGF-TGHSEERHIVA-----VQETLNEIGVATLRADMYGHGKS---DGKFEDHTL 79
Query: 106 ANAANDL---ANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
++ + K + + GHS GG + A
Sbjct: 80 FKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAA 118
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} Length = 316 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 5e-05
Identities = 35/171 (20%), Positives = 55/171 (32%), Gaps = 30/171 (17%)
Query: 1 MARILKNRHNSLNLLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW 60
L + LNL + +N P +L L SS+RP F++H + GS +
Sbjct: 11 KEDGLAQQQTQLNLRSLLVN-PEGPTLMRL---NSVQSSERPL----FLVHPIEGSTTVF 62
Query: 61 RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120
+LAS LS + + P I + A + ++
Sbjct: 63 H----SLASRLSIPTYGLQCT----------------RAAPLDSIHSLAAYYIDCIRQVQ 102
Query: 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT 171
+ P V G+S G VA L++ D P V
Sbjct: 103 PEGPYRVAGYSYGACVAFEMCSQLQAQ--QSPAPTHNSLFLFDGSPTYVLA 151
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A Length = 319 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 5e-05
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
G +G F R L+++ E + V L +G P D+
Sbjct: 93 VGCTGTAANGGPH-EFLR-LSTSFQ-----EERDFLAVPLPGYGTGTGTGTALLPADLDT 145
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
A + A + D P V++GH+ G +A A RA G A + ++D P
Sbjct: 146 ALDAQARAILRAAGDAPVVLLGHAGGALLAHELAFRLERAH-GAPPAG---IVLVDPYP 200
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 6e-05
Identities = 22/135 (16%), Positives = 36/135 (26%), Gaps = 25/135 (18%)
Query: 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS----AEIEGLDP 101
LHGL GS + + A + ++ D HG +
Sbjct: 26 LLLALHGLQGSKEHILALLPGYAE--------RGFLLLAFDAPRHGEREGPPPSSKSPRY 77
Query: 102 PHDIANAANDLANLVKAKGWDWPDV------VIGHSMGGKVAL-------HFAQSCARAD 148
++ A + + + G S+G VA A
Sbjct: 78 VEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIG 137
Query: 149 YGQFVALPKQLWVLD 163
G + LP+ V D
Sbjct: 138 SGFPMKLPQGQVVED 152
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 7e-05
Identities = 52/285 (18%), Positives = 90/285 (31%), Gaps = 42/285 (14%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH--DIAN 107
LHG +N + +A L+ E+ +V DLR +G S++ G
Sbjct: 31 LHGF---PQNLHMW-ARVAPLLAN-----EYTVVCADLRGYGGSSKPVGAPDHANYSFRA 81
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
A+D L++ G++ ++GH+ GG+ A D+ V L VLD +P
Sbjct: 82 MASDQRELMRTLGFE-RFHLVGHARGGRTGHRMA-----LDHPDSV---LSLAVLDIIPT 132
Query: 168 KVKTENSEGEVEKVL--QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGE- 224
V E + V + P+ P + + L W T
Sbjct: 133 YVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYE--GCLFGWGATGADGFDPE 190
Query: 225 -RETW--AFNLDGAVQ-MFNSYREM-SYWPLLEHPPQGMEIAI----VRAEKSDRWDPDV 275
E + + A+ YR + L+H G ++ +
Sbjct: 191 QLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSA------GL 244
Query: 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
+ L + + LP GH+ P I+
Sbjct: 245 MHSLFEMQVVWAPRLAN-MRFASLP-GGHFFVDRFPDDTARILRE 287
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 8e-05
Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 13/119 (10%)
Query: 28 QTLAYEEVRSSSDRPYTSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD 86
Q L E + P+ + ++ G ++ + L++ + + + D
Sbjct: 18 QELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST--------NGFHVFRYD 69
Query: 87 LRNH-GRSA-EIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143
+H G S+ I+ + + + ++ KG +I S+ +VA
Sbjct: 70 SLHHVGLSSGSIDEFTMTTGKNSLC-TVYHWLQTKGTQ-NIGLIAASLSARVAYEVISD 126
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 8e-05
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 11/92 (11%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG S WR ++ R ++ DL G+S + + + + +
Sbjct: 49 LHGNATSSYLWRHVVPHIEPV---------ARCIIPDLIGMGKSGKSG--NGSYRLLDHY 97
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
L + + +GH G +A H+A
Sbjct: 98 KYLTAWFELLNLPKKIIFVGHDWGAALAFHYA 129
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 10/93 (10%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP-HDIANA 108
HG S WR N+ L R+V DL G S ++ P +
Sbjct: 34 QHGNPTSSYLWR----NIMPHLE-----GLGRLVACDLIGMGASDKLSPSGPDRYSYGEQ 84
Query: 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+ L L A V++ H G + +A
Sbjct: 85 RDFLFALWDALDLGDHVVLVLHDWGSALGFDWA 117
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 1e-04
Identities = 42/281 (14%), Positives = 73/281 (25%), Gaps = 36/281 (12%)
Query: 48 FVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106
FVL H + W L + ++ +DL G ++
Sbjct: 6 FVLIHTICHGAWIWHKLKPLLEA--------LGHKVTALDLAASGVDPR--QIEEIGSFD 55
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA-RADYGQFVA--LPKQLWVLD 163
+ L ++A +++G S GG A + F LP
Sbjct: 56 EYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPS 115
Query: 164 SVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSG 223
V K+ E + T I K + E ++ E L K
Sbjct: 116 YVVDKL-MEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEY--ELAKML 172
Query: 224 ERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLA 283
R+ F A + F + V ++ D Q
Sbjct: 173 TRKGSLFQNILAKRPFFTKEGYGSIKK----------IYVWTDQ-DEIFLPEFQLW--QI 219
Query: 284 NRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
V+ + H + + K + EI+ +A
Sbjct: 220 ENY-----KPDKVYKVEGGDHKLQLTKTKEIAEILQ-EVAD 254
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP-PHDIANA 108
HG S WR N+ + R++ DL G S +++ P + A
Sbjct: 35 QHGNPTSSYLWR----NIMPHCAGL-----GRLIACDLIGMGDSDKLDPSGPERYAYAEH 85
Query: 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+ L L +A V++ H G + +A
Sbjct: 86 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWA 118
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* Length = 280 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 1e-04
Identities = 29/162 (17%), Positives = 52/162 (32%), Gaps = 23/162 (14%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPPHDIA 106
G+ +R + L E +V V L G R E P +
Sbjct: 55 VCFPYAGGTVSAFRGWQERL---------GDEVAVVPVQLPGRGLRLRE----RPYDTME 101
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
A +A+ ++ + GHSMG +A A R P+ L+V S
Sbjct: 102 PLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRG----APRPRHLFVSGSRA 157
Query: 167 GKVKTE-----NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMM 203
+ + S+ + +V++ L L + + +
Sbjct: 158 PHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRL 199
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 52/272 (19%), Positives = 82/272 (30%), Gaps = 48/272 (17%)
Query: 76 ASSEWRMVLVDLRNHGRSAEIEGLDPPH-DIANAANDLANLVKAKGWDWPD-VVIGHSMG 133
A +R V DLR +G + DP I + D+ L++A + V+ H G
Sbjct: 55 AERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWG 114
Query: 134 GKVALHFAQ----------------SCARADYGQFVALPKQL-----WVLDSVPGKVKTE 172
+A H S L VPG+++ E
Sbjct: 115 ALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAE 174
Query: 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMEL-GFSKSLSEWIGTNLKKSGERE----T 227
+ + VL+ + + P + + +LS W+ E E
Sbjct: 175 FAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWL-------SEEELDYYA 227
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI----VRAEKSDRWDPDVIQRLEGLA 283
F G N YR + L P G ++ + + E D V
Sbjct: 228 NKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEF----DL-VYHIPGAKE 282
Query: 284 NRQGDGSEGKVS----VHVLPNAGHWVHVDNP 311
G + V V VL A H+V + P
Sbjct: 283 YIHNGGFKKDVPLLEEVVVLEGAAHFVSQERP 314
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} Length = 202 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 2e-04
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 87 LRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144
L+ H E++ P A AA L ++V K ++G S+GG A +Q
Sbjct: 27 LQQHHPHIEMQIPQLPPYPAEAAEMLESIVMDKAGQ-SIGIVGSSLGGYFATWLSQRF 83
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP--PHDIAN 107
LHG + + +A L+ + +V DLR +G S+ + +
Sbjct: 31 LHGY---PQTHVMW-HKIAPLLAN-----NFTVVATDLRGYGDSSRPASVPHHINYSKRV 81
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
A D ++ G++ V+GH G +VA A D+ V K+L +LD P
Sbjct: 82 MAQDQVEVMSKLGYE-QFYVVGHDRGARVAHRLA-----LDHPHRV---KKLALLDIAPT 132
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 47/289 (16%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--PPHDIAN 107
LHG + + +A L++ +++++ DL +G S E + P+
Sbjct: 39 LHGF---PQTHVMW-HRVAPKLAER-----FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
A L ++ G + GH+ G +V+ A D + +L VLD +P
Sbjct: 90 MAKQLIEAMEQLGHV-HFALAGHNRGARVSYRLA-----LDSPGRL---SKLAVLDILPT 140
Query: 168 KVKTENSEGEVEKVL--QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGER 225
+ + + + P+ +P L+ + L+ W + +
Sbjct: 141 YEYWQRMNRAYALKIYHWSFLAQPAPLPEN--LLGGDPDFYVKAKLASWTRAGDLSAFDP 198
Query: 226 ETW-----AFNLDGAVQ-MFNSYREMSYWPL---LEHPPQGMEIAI----VRAEKSDRWD 272
AF M YR +Y G +I + +
Sbjct: 199 RAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQS 258
Query: 273 P-DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
+ A+ V + +GH++ + P E +
Sbjct: 259 AATPLDVWRKWASD--------VQGAPIE-SGHFLPEEAPDQTAEALVR 298
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 47/295 (15%), Positives = 90/295 (30%), Gaps = 58/295 (19%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG S WR N+ + ++ +R V DL G S D + + +
Sbjct: 35 LHGNPTSSYLWR----NIIPYV----VAAGYRAVAPDLIGMGDS---AKPDIEYRLQDHV 83
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDS-VPGK 168
+ + A G D V++ H G + + A V + +++ VP
Sbjct: 84 AYMDGFIDALGLD-DMVLVIHDWGSVIGMRHA-----RLNPDRV---AAVAFMEALVPPA 134
Query: 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH-------MMELGFSKSLSEWIGTNLKK 221
+ + E ++ + L ++ K +++ + E+G +SLSE
Sbjct: 135 LPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSE-------- 186
Query: 222 SGERET--WAFNLDGAVQ-MFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDR-----W-D 272
E F + RE+ + S +
Sbjct: 187 -AEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAE 245
Query: 273 PDVIQRLEGLANRQGDGSEGKV---SVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
P + + D V V + H++ D+P ++ IA
Sbjct: 246 PGALAPKPVV-----DYLSENVPNLEVRFVGAGTHFLQEDHP----HLIGQGIAD 291
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* Length = 226 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 24/151 (15%)
Query: 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQT-----SAS 77
+ + E + + + LHGL +++ + L L T A
Sbjct: 4 SHHHHHHGSSEPLILDAPNA-DACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAP 62
Query: 78 SEWRMVLVDLRNHGRSA----EIEGLDP-----PHDIANAANDLANLV---KAKGWDWPD 125
S+ V N G +I P + +A+ + L+ +AKG
Sbjct: 63 SQAVTV-----NGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAER 117
Query: 126 VVI-GHSMGGKVALHFAQSCARADYGQFVAL 155
+++ G S GG V LH A G +AL
Sbjct: 118 IILAGFSQGGAVVLHTAFRRYAQPLGGVLAL 148
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A Length = 283 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 6e-04
Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Query: 98 GLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157
P I + A + ++ + P V G+S G VA
Sbjct: 58 RAAPLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQ--QSPAPTHN 115
Query: 158 QLWVLDSVPGKVKTENSEGEVE 179
L++ D P V +
Sbjct: 116 SLFLFDGSPTYVLAYTGSYRAK 137
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 41/297 (13%), Positives = 80/297 (26%), Gaps = 57/297 (19%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG S WR N+ +S + DL G+S D + +
Sbjct: 35 LHGNPTSSHIWR----NILPLVS-----PVAHCIAPDLIGFGQS---GKPDIAYRFFDHV 82
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADY-----GQFVALPKQLWVLDS 164
L ++ +G ++ G +A H A R D+ P W
Sbjct: 83 RYLDAFIEQRGVT-SAYLVAQDWGTALAFHLAA--RRPDFVRGLAFMEFIRPMPTWQDFH 139
Query: 165 VPGKVKTENSEGEVEKVLQTLQSLPS---SIPSRKWLVNHMMELGFSKSLSEWIGTNLKK 221
+ ++ V + ++ I V ++ G + L +
Sbjct: 140 HTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGD-------- 191
Query: 222 SGERETWA-----FNLDGAVQ-MFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDR----- 270
E A F + + + RE+ + ++ A S
Sbjct: 192 ----EEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLF 247
Query: 271 W-DPDVIQRLEGLANRQGD--GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
+P + E + L H++ D+ + + +A
Sbjct: 248 TGEPGALVSPEFAERFAASLTRCA----LIRLGAGLHYLQEDHA----DAIGRSVAG 296
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 7e-04
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 38 SSDRPYTSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96
S P+ FVL H W + S S + +DL G + +
Sbjct: 5 KSMSPFVKKHFVLVHAAFHGAWCWYKIVALMRS--------SGHNVTALDLGASGINPK- 55
Query: 97 EGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVA 137
+ ++ + L + + + +++GH++GG
Sbjct: 56 -QALQIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAI 95
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 325 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 100.0 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.98 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.96 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.98 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.98 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.97 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.97 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.97 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.97 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.97 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.97 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.97 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.95 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.95 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.95 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.95 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.95 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.95 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.95 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.95 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.95 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.95 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.94 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.94 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.94 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.94 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.94 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.94 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.94 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.94 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.94 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.94 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.93 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.93 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.93 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.93 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.93 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.93 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.93 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.93 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.93 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.93 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.93 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.92 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.92 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.92 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.92 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.92 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.91 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.91 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.91 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.91 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.91 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.91 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.9 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.9 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.9 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.9 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.9 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.9 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.9 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.9 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.89 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.89 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.89 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.89 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.89 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.89 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.89 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.89 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.88 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.88 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.88 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.88 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.88 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.88 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.87 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.87 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.87 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.87 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.87 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.87 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.86 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.86 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.86 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.85 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.85 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.85 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.85 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.84 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.84 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.84 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.84 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.84 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.83 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.83 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.83 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.83 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.83 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.82 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.82 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.81 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.81 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.8 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.8 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.8 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.8 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.8 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.8 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.79 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.79 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.78 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.78 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.77 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.76 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.76 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.75 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.75 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.74 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.74 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.74 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.74 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.74 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.74 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.73 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.7 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.7 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.68 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.64 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.63 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.63 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.63 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.62 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.62 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.6 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.58 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.57 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.57 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.53 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.49 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.49 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.44 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.32 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.32 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.97 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.93 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.92 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.84 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.79 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.71 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.69 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.68 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.64 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.61 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.59 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.53 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.47 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.46 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.39 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.36 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.3 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.29 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.21 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.1 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.01 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.99 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.96 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.96 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.92 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.84 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.81 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.75 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.7 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.58 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.49 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.46 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.81 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.81 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.72 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.7 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.64 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.61 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.55 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 96.48 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.45 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.35 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.33 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.33 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.2 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.95 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 95.64 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 93.57 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.19 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 92.66 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 92.48 | |
| 3im8_A | 307 | Malonyl acyl carrier protein transacylase; fatty a | 83.07 | |
| 3ptw_A | 336 | Malonyl COA-acyl carrier protein transacylase; str | 82.14 | |
| 2qc3_A | 303 | MCT, malonyl COA-acyl carrier protein transacylase | 82.08 | |
| 3ho6_A | 267 | Toxin A; inositol phosphate, enterotoxin; HET: IHP | 81.95 | |
| 3pa8_A | 254 | Toxin B; CLAN CD cysteine protease, protease, toxi | 81.61 | |
| 2cuy_A | 305 | Malonyl COA-[acyl carrier protein] transacylase; t | 81.18 | |
| 2h1y_A | 321 | Malonyl coenzyme A-acyl carrier protein transacyl; | 80.72 | |
| 1mla_A | 309 | Malonyl-coenzyme A acyl carrier protein transacyla | 80.38 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 80.06 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=268.51 Aligned_cols=248 Identities=16% Similarity=0.157 Sum_probs=179.8
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
..+|.+|+|...|++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..+
T Consensus 11 ~~~g~~l~y~~~G~~----~~p~lvl~hG~~~~~~~w~~~~~~L~---------~~~~vi~~D~rG~G~S~~~~---~~~ 74 (266)
T 3om8_A 11 TSDGASLAYRLDGAA----EKPLLALSNSIGTTLHMWDAQLPALT---------RHFRVLRYDARGHGASSVPP---GPY 74 (266)
T ss_dssp CTTSCEEEEEEESCT----TSCEEEEECCTTCCGGGGGGGHHHHH---------TTCEEEEECCTTSTTSCCCC---SCC
T ss_pred ccCCcEEEEEecCCC----CCCEEEEeCCCccCHHHHHHHHHHhh---------cCcEEEEEcCCCCCCCCCCC---CCC
Confidence 347899999999863 47899999999999999999999998 68999999999999999875 479
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++.+...... .+.....
T Consensus 75 ~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~A~~~P~--------rv~~lvl~~~~~~~~~~~----~~~~~~~ 141 (266)
T 3om8_A 75 TLARLGEDVLELLDALEVR-RAHFLGLSLGGIVGQWLALHAPQ--------RIERLVLANTSAWLGPAA----QWDERIA 141 (266)
T ss_dssp CHHHHHHHHHHHHHHTTCS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSBCCCSH----HHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCC-ceEEEEEChHHHHHHHHHHhChH--------hhheeeEecCcccCCchh----HHHHHHH
Confidence 9999999999999999999 99999999999999999999999 999999999865432211 1111111
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccc-------hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFS-------KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
.+.... .............+. ....+.+..... ......+...+......+....+.+++
T Consensus 142 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~d~~~~l~~i~- 208 (266)
T 3om8_A 142 AVLQAE----DMSETAAGFLGNWFPPALLERAEPVVERFRAMLM--------ATNRHGLAGSFAAVRDTDLRAQLARIE- 208 (266)
T ss_dssp HHHHCS----SSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHH--------TSCHHHHHHHHHHHHTCBCTTTGGGCC-
T ss_pred HHHccc----cHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHH--------hCCHHHHHHHHHHhhccchhhHhcCCC-
Confidence 111100 000111111110000 000111111100 011222222223333445556667666
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+|+|+|+|++|.+++++..+.+.+.+++ +++++++ +||++++|+|++|++.|.+||+
T Consensus 209 -~P~Lvi~G~~D~~~~~~~~~~l~~~ip~--------a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 209 -RPTLVIAGAYDTVTAASHGELIAASIAG--------ARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp -SCEEEEEETTCSSSCHHHHHHHHHHSTT--------CEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred -CCEEEEEeCCCCCCCHHHHHHHHHhCCC--------CEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 8999999999999999988888888876 9999998 7999999999999999999996
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=265.31 Aligned_cols=254 Identities=16% Similarity=0.198 Sum_probs=172.5
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.|+|..+|+. .+++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.. ..++++++
T Consensus 2 ~i~y~~~g~~--~~~~~~vvllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~--~~~~~~~~ 68 (268)
T 3v48_A 2 HMKLSLSPPP--YADAPVVVLISGLGGSGSYWLPQLAVLE---------QEYQVVCYDQRGTGNNPDTLA--EDYSIAQM 68 (268)
T ss_dssp CSCCEECCCS--STTCCEEEEECCTTCCGGGGHHHHHHHH---------TTSEEEECCCTTBTTBCCCCC--TTCCHHHH
T ss_pred ceEEEecCCC--CCCCCEEEEeCCCCccHHHHHHHHHHHh---------hcCeEEEECCCCCCCCCCCcc--ccCCHHHH
Confidence 4778888763 2358999999999999999999999998 679999999999999987654 57899999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++....... ...........+...
T Consensus 69 a~dl~~~l~~l~~~-~~~lvGhS~GG~ia~~~A~~~p~--------~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~ 137 (268)
T 3v48_A 69 AAELHQALVAAGIE-HYAVVGHALGALVGMQLALDYPA--------SVTVLISVNGWLRINAH--TRRCFQVRERLLYSG 137 (268)
T ss_dssp HHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCSBCCHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC-CeEEEEecHHHHHHHHHHHhChh--------hceEEEEeccccccchh--hhHHHHHHHHHHhcc
Confidence 99999999999999 99999999999999999999999 99999999976432110 000000000000000
Q ss_pred CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCC----CcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEe
Q 020518 189 PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKS----GERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
.............+.. .|........ ................+......+....+.+++ +|+++|+
T Consensus 138 -----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~--~P~Lii~ 207 (268)
T 3v48_A 138 -----GAQAWVEAQPLFLYPA---DWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIR--CPVQIIC 207 (268)
T ss_dssp -----HHHHHHHHHHHHHSCH---HHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCC--SCEEEEE
T ss_pred -----chhhhhhhhhhhcCch---hhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCC--CCeEEEE
Confidence 0000000000000000 0000000000 000000000111111222222334445566665 8999999
Q ss_pred eCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 265 AEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 265 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||.+
T Consensus 208 G~~D~~~p~~~~~~l~~~~p~--------~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 259 (268)
T 3v48_A 208 ASDDLLVPTACSSELHAALPD--------SQKMVMPYGGHACNVTDPETFNALLLNGLAS 259 (268)
T ss_dssp ETTCSSSCTHHHHHHHHHCSS--------EEEEEESSCCTTHHHHCHHHHHHHHHHHHHH
T ss_pred eCCCcccCHHHHHHHHHhCCc--------CeEEEeCCCCcchhhcCHHHHHHHHHHHHHH
Confidence 999999999988888887776 9999999999999999999999999999975
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=254.35 Aligned_cols=253 Identities=21% Similarity=0.338 Sum_probs=173.2
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
+|+|...|+.. ..++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+ ..++++++
T Consensus 2 ~l~y~~~G~~~-~~~~~~vvllHG~~~~~~~w~~~~~~L~---------~~~~via~Dl~G~G~S~~~----~~~~~~~~ 67 (255)
T 3bf7_A 2 KLNIRAQTAQN-QHNNSPIVLVHGLFGSLDNLGVLARDLV---------NDHNIIQVDVRNHGLSPRE----PVMNYPAM 67 (255)
T ss_dssp CCCEEEECCSS-CCCCCCEEEECCTTCCTTTTHHHHHHHT---------TTSCEEEECCTTSTTSCCC----SCCCHHHH
T ss_pred ceeeeecCccc-cCCCCCEEEEcCCcccHhHHHHHHHHHH---------hhCcEEEecCCCCCCCCCC----CCcCHHHH
Confidence 47888888631 1257899999999999999999999998 5699999999999999875 35799999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++.+.............. +..+...
T Consensus 68 a~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~p~~~~~~~~~~~~~~-~~~~~~~ 137 (255)
T 3bf7_A 68 AQDLVDTLDALQID-KATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDIAPVDYHVRRHDEIFAA-INAVSES 137 (255)
T ss_dssp HHHHHHHHHHHTCS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSSCCCSCCCHHHHHH-HHHHHHS
T ss_pred HHHHHHHHHHcCCC-CeeEEeeCccHHHHHHHHHhCcH--------hhccEEEEcCCcccCCcccHHHHHHH-HHhcccc
Confidence 99999999999999 99999999999999999999999 99999999865433221111111111 1111110
Q ss_pred CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCC
Q 020518 189 PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
...........+...........++....... .+..........+..... +..+..+ ++|+++|+|++|
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~l~~i--~~P~l~i~G~~D 206 (255)
T 3bf7_A 138 --DAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDG----EWRFNVPVLWDQYPHIVG---WEKIPAW--DHPALFIPGGNS 206 (255)
T ss_dssp --CCCSHHHHHHHHTTTCCCHHHHHHHHTTEETT----EESSCHHHHHHTHHHHHC---CCCCCCC--CSCEEEECBTTC
T ss_pred --ccccHHHHHHHHhhhcchhHHHHHHHHhccCC----ceeecHHHHHhhhhhccc---ccccccc--CCCeEEEECCCC
Confidence 11111111111111111122223322221110 122222222221111111 1123444 489999999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 207 ~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 207 PYVSEQYRDDLLAQFPQ--------ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp STTCGGGHHHHHHHCTT--------EEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHCCC--------CeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 99999888878777765 9999999999999999999999999999974
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=256.95 Aligned_cols=249 Identities=13% Similarity=0.107 Sum_probs=174.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|..+|+.. +++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+. ..+++
T Consensus 10 ~g~~l~y~~~g~~~--~~~~~vvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~~---~~~~~ 75 (266)
T 2xua_A 10 NGTELHYRIDGERH--GNAPWIVLSNSLGTDLSMWAPQVAALS---------KHFRVLRYDTRGHGHSEAPK---GPYTI 75 (266)
T ss_dssp SSSEEEEEEESCSS--SCCCEEEEECCTTCCGGGGGGGHHHHH---------TTSEEEEECCTTSTTSCCCS---SCCCH
T ss_pred CCEEEEEEEcCCcc--CCCCeEEEecCccCCHHHHHHHHHHHh---------cCeEEEEecCCCCCCCCCCC---CCCCH
Confidence 67899999998631 127899999999999999999999998 56999999999999998765 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++.+..... ..+......+
T Consensus 76 ~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~A~~~p~--------~v~~lvl~~~~~~~~~~----~~~~~~~~~~ 142 (266)
T 2xua_A 76 EQLTGDVLGLMDTLKIA-RANFCGLSMGGLTGVALAARHAD--------RIERVALCNTAARIGSP----EVWVPRAVKA 142 (266)
T ss_dssp HHHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSSCSCH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC-ceEEEEECHHHHHHHHHHHhChh--------hhheeEEecCCCCCCch----HHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999 99999999986533211 1111111000
Q ss_pred hcCCCCCCcHHHHHHHHHhhccch-------hHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 186 QSLPSSIPSRKWLVNHMMELGFSK-------SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
... .............+.. ...+.+...... .....+...+......+....+..++ +
T Consensus 143 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~i~--~ 207 (266)
T 2xua_A 143 RTE-----GMHALADAVLPRWFTADYMEREPVVLAMIRDVFVH--------TDKEGYASNCEAIDAADLRPEAPGIK--V 207 (266)
T ss_dssp HHH-----CHHHHHHHHHHHHSCHHHHHHCHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHCCCGGGGGGCC--S
T ss_pred Hhc-----ChHHHHHHHHHHHcCcccccCCHHHHHHHHHHHhh--------CCHHHHHHHHHHHhccCchhhhccCC--C
Confidence 000 0000111100000000 000111111000 01111111122222223445556665 8
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
|+++|+|++|..++++..+.+.+.+++ +++++++ +||++++|+|+++++.|.+||+++
T Consensus 208 P~lvi~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 208 PALVISGTHDLAATPAQGRELAQAIAG--------ARYVELD-ASHISNIERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHSTT--------CEEEEES-CCSSHHHHTHHHHHHHHHHHHTC-
T ss_pred CEEEEEcCCCCcCCHHHHHHHHHhCCC--------CEEEEec-CCCCchhcCHHHHHHHHHHHHHhc
Confidence 999999999999999888888777766 8999999 999999999999999999999763
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=259.04 Aligned_cols=250 Identities=16% Similarity=0.206 Sum_probs=171.7
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
..+|.+|+|..+|. +++|||+||++++...|..+++.|.+ +||+|+++|+||||.|+.+. ..+
T Consensus 5 ~~~g~~l~y~~~G~------g~~vvllHG~~~~~~~w~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~ 67 (271)
T 3ia2_A 5 AKDGTQIYFKDWGS------GKPVLFSHGWLLDADMWEYQMEYLSS--------RGYRTIAFDRRGFGRSDQPW---TGN 67 (271)
T ss_dssp CTTSCEEEEEEESS------SSEEEEECCTTCCGGGGHHHHHHHHT--------TTCEEEEECCTTSTTSCCCS---SCC
T ss_pred cCCCCEEEEEccCC------CCeEEEECCCCCcHHHHHHHHHHHHh--------CCceEEEecCCCCccCCCCC---CCC
Confidence 35789999999985 67899999999999999999999986 78999999999999998765 478
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC------Cchh
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE------NSEG 176 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~------~~~~ 176 (325)
+++++++|+.+++++++.+ +++|+||||||.+++.+++++ |+ +|+++|++++.+...... ....
T Consensus 68 ~~~~~a~d~~~~l~~l~~~-~~~lvGhS~GG~~~~~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3ia2_A 68 DYDTFADDIAQLIEHLDLK-EVTLVGFSMGGGDVARYIARHGSA--------RVAGLVLLGAVTPLFGQKPDYPQGVPLD 138 (271)
T ss_dssp SHHHHHHHHHHHHHHHTCC-SEEEEEETTHHHHHHHHHHHHCST--------TEEEEEEESCCCSBCBCBTTBTTSBCHH
T ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEEcccHHHHHHHHHHhCCc--------ccceEEEEccCCccccCCCCCcccccHH
Confidence 9999999999999999999 999999999999877777665 88 999999999764322110 0011
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhh----c----cchhHH-HHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMEL----G----FSKSLS-EWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
........+.. ........+... . ...... .+.... ...........+..+...+.
T Consensus 139 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 203 (271)
T 3ia2_A 139 VFARFKTELLK------DRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIA---------LLASLKATVDCVTAFAETDF 203 (271)
T ss_dssp HHHHHHHHHHH------HHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHH---------HHSCHHHHHHHHHHHHHCBC
T ss_pred HHHHHHHHHHh------hHHHHHHHhhHhhhccccccccCHHHHHHHHhhh---------hhccHHHHHHHHHHhhccCC
Confidence 11111111000 000000000000 0 000000 000000 00011112222222233344
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...+..++ +|+|+|+|++|.+++++. .+.+.+..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 204 ~~~l~~i~--~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 204 RPDMAKID--VPTLVIHGDGDQIVPFETTGKVAAELIKG--------AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHHHTTCC--SCEEEEEETTCSSSCGGGTHHHHHHHSTT--------CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred cccccCCC--CCEEEEEeCCCCcCChHHHHHHHHHhCCC--------ceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 55566665 899999999999999876 4555555555 9999999999999999999999999999974
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=256.99 Aligned_cols=250 Identities=14% Similarity=0.199 Sum_probs=173.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|.+.|. +++|||+||++++...|..+++.|.+ .||+|+++|+||||.|+.+. ..++
T Consensus 14 ~~g~~l~y~~~G~------g~~vvllHG~~~~~~~w~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 76 (281)
T 3fob_A 14 QAPIEIYYEDHGT------GKPVVLIHGWPLSGRSWEYQVPALVE--------AGYRVITYDRRGFGKSSQPW---EGYE 76 (281)
T ss_dssp TEEEEEEEEEESS------SEEEEEECCTTCCGGGGTTTHHHHHH--------TTEEEEEECCTTSTTSCCCS---SCCS
T ss_pred CCceEEEEEECCC------CCeEEEECCCCCcHHHHHHHHHHHHh--------CCCEEEEeCCCCCCCCCCCc---cccC
Confidence 4688999999885 67899999999999999999999986 78999999999999998875 5789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC------Cch-h
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE------NSE-G 176 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~------~~~-~ 176 (325)
++++++|+.+++++++++ +++|+||||||.+++.+++++ |+ +|+++|++++.+...... ... .
T Consensus 77 ~~~~a~dl~~ll~~l~~~-~~~lvGhS~GG~i~~~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 147 (281)
T 3fob_A 77 YDTFTSDLHQLLEQLELQ-NVTLVGFSMGGGEVARYISTYGTD--------RIEKVVFAGAVPPYLYKSEDHPEGALDDA 147 (281)
T ss_dssp HHHHHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCCSSSTTCSBCHH
T ss_pred HHHHHHHHHHHHHHcCCC-cEEEEEECccHHHHHHHHHHcccc--------ceeEEEEecCCCcchhccccccccccchh
Confidence 999999999999999999 999999999999888887776 78 999999999764322110 000 1
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhhc---------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMELG---------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
........+.. ........+.... ..+....+.... ............+..+...+.
T Consensus 148 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~ 213 (281)
T 3fob_A 148 TIETFKSGVIN------DRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDI--------AAGASPKGTLDCITAFSKTDF 213 (281)
T ss_dssp HHHHHHHHHHH------HHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHH--------HHTSCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhhh------hHHHHHHHHHHHhcccccccccchHHHHHHhhhh--------hcccChHHHHHHHHHccccch
Confidence 11111110000 0000000000000 000000000000 000011122222222333455
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...+.+++ +|+|+|+|++|..++++.. +.+.+.+++ +++++++++||++++|+|++|++.|.+||+.
T Consensus 214 ~~~l~~i~--~P~Lii~G~~D~~~p~~~~~~~~~~~~p~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 214 RKDLEKFN--IPTLIIHGDSDATVPFEYSGKLTHEAIPN--------SKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp HHHHTTCC--SCEEEEEETTCSSSCGGGTHHHHHHHSTT--------CEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred hhhhhhcC--CCEEEEecCCCCCcCHHHHHHHHHHhCCC--------ceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 55667666 8999999999999998754 566666665 9999999999999999999999999999963
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=253.22 Aligned_cols=254 Identities=15% Similarity=0.241 Sum_probs=164.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC---
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP--- 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~--- 101 (325)
.+|.+++|.+.|. +|+|||+||+++++..|..+++.|+ +.|+||++|+||||.|+.+ . .
T Consensus 16 ~~g~~l~y~~~G~------g~~lvllHG~~~~~~~w~~~~~~L~---------~~~~via~Dl~G~G~S~~~-~--~~~~ 77 (294)
T 1ehy_A 16 LPDVKIHYVREGA------GPTLLLLHGWPGFWWEWSKVIGPLA---------EHYDVIVPDLRGFGDSEKP-D--LNDL 77 (294)
T ss_dssp CSSCEEEEEEEEC------SSEEEEECCSSCCGGGGHHHHHHHH---------TTSEEEEECCTTSTTSCCC-C--TTCG
T ss_pred ECCEEEEEEEcCC------CCEEEEECCCCcchhhHHHHHHHHh---------hcCEEEecCCCCCCCCCCC-c--cccc
Confidence 3678999999884 6799999999999999999999998 5699999999999999886 3 2
Q ss_pred -CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH-H
Q 020518 102 -PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV-E 179 (325)
Q Consensus 102 -~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~-~ 179 (325)
.|+++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++.............. .
T Consensus 78 ~~~~~~~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~va~~~A~~~P~--------~v~~lvl~~~~~~~~~~~~~~~~~~~ 148 (294)
T 1ehy_A 78 SKYSLDKAADDQAALLDALGIE-KAYVVGHDFAAIVLHKFIRKYSD--------RVIKAAIFDPIQPDFGPVYFGLGHVH 148 (294)
T ss_dssp GGGCHHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHHHHTGG--------GEEEEEEECCSCTTC-----------
T ss_pred cCcCHHHHHHHHHHHHHHcCCC-CEEEEEeChhHHHHHHHHHhChh--------heeEEEEecCCCCCcchhhccchhcc
Confidence 689999999999999999999 99999999999999999999999 999999999743211111000000 0
Q ss_pred -HHHHHhhc--CC---CCCCc--HHHHHHHHHhh------ccchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccC
Q 020518 180 -KVLQTLQS--LP---SSIPS--RKWLVNHMMEL------GFSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE 244 (325)
Q Consensus 180 -~~~~~~~~--~~---~~~~~--~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (325)
.+...+.. .. ..... .......+... ...+. ...+... ..... ........+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~ 220 (294)
T 1ehy_A 149 ESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDN-CMKPD-------NIHGGFNYYRANIR 220 (294)
T ss_dssp CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHH-HTSTT-------HHHHHHHHHHHHSS
T ss_pred CceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH-hcCCc-------ccchHHHHHHHHHh
Confidence 00000000 00 00000 00011111110 00000 0111100 00000 00000111111100
Q ss_pred Cc--cc--ccccCCCCCCcEEEEeeCCCCCCCh-HHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHH
Q 020518 245 MS--YW--PLLEHPPQGMEIAIVRAEKSDRWDP-DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 245 ~~--~~--~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
.. .. ..+..+ ++|+++|+|++|..+++ ...+.+.+.+++ ++++++++|||++++|+|++|++.|.
T Consensus 221 ~~~~~~~~~~l~~i--~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~ 290 (294)
T 1ehy_A 221 PDAALWTDLDHTMS--DLPVTMIWGLGDTCVPYAPLIEFVPKYYSN--------YTMETIEDCGHFLMVEKPEIAIDRIK 290 (294)
T ss_dssp SSCCCCCTGGGSCB--CSCEEEEEECCSSCCTTHHHHHHHHHHBSS--------EEEEEETTCCSCHHHHCHHHHHHHHH
T ss_pred hhhhhcCCcccCcC--CCCEEEEEeCCCCCcchHHHHHHHHHHcCC--------CceEEeCCCCCChhhhCHHHHHHHHH
Confidence 00 00 122344 48999999999998883 566677777665 99999999999999999999999999
Q ss_pred HHHh
Q 020518 320 PRIA 323 (325)
Q Consensus 320 ~fl~ 323 (325)
+||+
T Consensus 291 ~fl~ 294 (294)
T 1ehy_A 291 TAFR 294 (294)
T ss_dssp HHCC
T ss_pred HHhC
Confidence 9984
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=252.71 Aligned_cols=251 Identities=15% Similarity=0.180 Sum_probs=172.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|..+|+. ++++|||+||++++...|..+++.|.+ .||+|+++|+||||.|+.+. ..++
T Consensus 7 ~~g~~l~y~~~g~~----~~~~vvllHG~~~~~~~w~~~~~~L~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 71 (276)
T 1zoi_A 7 KDGVQIFYKDWGPR----DAPVIHFHHGWPLSADDWDAQLLFFLA--------HGYRVVAHDRRGHGRSSQVW---DGHD 71 (276)
T ss_dssp TTSCEEEEEEESCT----TSCEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCS
T ss_pred CCCcEEEEEecCCC----CCCeEEEECCCCcchhHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCC---CCCC
Confidence 46889999998852 368999999999999999999999987 78999999999999998754 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC--C----chhH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE--N----SEGE 177 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~--~----~~~~ 177 (325)
++++++|+.+++++++++ +++|+||||||.+|+.+|+++ |+ +|+++|++++.+...... . ....
T Consensus 72 ~~~~~~d~~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 142 (276)
T 1zoi_A 72 MDHYADDVAAVVAHLGIQ-GAVHVGHSTGGGEVVRYMARHPED--------KVAKAVLIAAVPPLMVQTPGNPGGLPKSV 142 (276)
T ss_dssp HHHHHHHHHHHHHHHTCT-TCEEEEETHHHHHHHHHHHHCTTS--------CCCCEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred HHHHHHHHHHHHHHhCCC-ceEEEEECccHHHHHHHHHHhCHH--------heeeeEEecCCCccccccccccccccHHH
Confidence 999999999999999999 999999999999999999887 89 999999999764321110 0 0011
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHh-hc---------cchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMME-LG---------FSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
.......+.. ........+.. .. ..+. ...+..... ..........+..+...+
T Consensus 143 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 207 (276)
T 1zoi_A 143 FDGFQAQVAS------NRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGM---------IGSAKAHYDGIVAFSQTD 207 (276)
T ss_dssp HHHHHHHHHH------CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---------HSCHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHH------hHHHHHHHhhhccccccccccccccHHHHHHHHhhhh---------hhhHHHHHHHHHHhcccc
Confidence 1111110000 00000000000 00 0000 000000000 000111111111222234
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+.+++ +|+++|+|++|..++++ ..+.+.+..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 208 ~~~~l~~i~--~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 276 (276)
T 1zoi_A 208 FTEDLKGIQ--QPVLVMHGDDDQIVPYENSGVLSAKLLPN--------GALKTYKGYPHGMPTTHADVINADLLAFIRS 276 (276)
T ss_dssp CHHHHHHCC--SCEEEEEETTCSSSCSTTTHHHHHHHSTT--------EEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred hhhhccccC--CCEEEEEcCCCcccChHHHHHHHHhhCCC--------ceEEEcCCCCCchhhhCHHHHHHHHHHHhcC
Confidence 444555555 89999999999999886 44556666655 9999999999999999999999999999964
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=255.79 Aligned_cols=249 Identities=14% Similarity=0.160 Sum_probs=174.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|.+.|. +++|||+||++++...|..+++.|++ .||+|+++|+||||.|+.+. ..++
T Consensus 10 ~~g~~l~y~~~g~------g~pvvllHG~~~~~~~~~~~~~~L~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 72 (277)
T 1brt_A 10 STSIDLYYEDHGT------GQPVVLIHGFPLSGHSWERQSAALLD--------AGYRVITYDRRGFGQSSQPT---TGYD 72 (277)
T ss_dssp TEEEEEEEEEECS------SSEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCS
T ss_pred CCCcEEEEEEcCC------CCeEEEECCCCCcHHHHHHHHHHHhh--------CCCEEEEeCCCCCCCCCCCC---CCcc
Confidence 4678999999874 56799999999999999999999986 78999999999999998765 4789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC-CC------chhH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT-EN------SEGE 177 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~-~~------~~~~ 177 (325)
++++++|+.+++++++++ +++|+||||||.+++.+|.++|+ .+|+++|++++.+..... .. ....
T Consensus 73 ~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 144 (277)
T 1brt_A 73 YDTFAADLNTVLETLDLQ-DAVLVGFSTGTGEVARYVSSYGT-------ARIAKVAFLASLEPFLLKTDDNPDGAAPQEF 144 (277)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEEGGGHHHHHHHHHHHCS-------TTEEEEEEESCCCSCCBCBTTBTTCSBCHHH
T ss_pred HHHHHHHHHHHHHHhCCC-ceEEEEECccHHHHHHHHHHcCc-------ceEEEEEEecCcCccccccccCccccccHHH
Confidence 999999999999999999 99999999999999999999995 279999999975432110 00 0111
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhc----------cchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELG----------FSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
+......+.. ........+.... .... ...+.... ...........+..+ ..+
T Consensus 145 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~ 208 (277)
T 1brt_A 145 FDGIVAAVKA------DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTA---------ASGGFFAAAAAPTTW-YTD 208 (277)
T ss_dssp HHHHHHHHHH------CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHH---------HHSCHHHHHHGGGGT-TCC
T ss_pred HHHHHHHHhc------CchhhHHHHHHHHhhccccccccCCHHHHHHHHHHH---------hccchHHHHHHHHHH-hcc
Confidence 1111111100 0000000000000 0000 00010000 000112222222223 334
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+.+++ +|+++|+|++|..++++.. +.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 209 ~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 209 FRADIPRID--VPALILHGTGDRTLPIENTARVFHKALPS--------AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CTTTGGGCC--SCEEEEEETTCSSSCGGGTHHHHHHHCTT--------SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred chhhcccCC--CCeEEEecCCCccCChHHHHHHHHHHCCC--------CcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 444556665 8999999999999998776 777777765 8999999999999999999999999999964
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=263.55 Aligned_cols=256 Identities=12% Similarity=0.060 Sum_probs=170.0
Q ss_pred cceEEEEcccCCCCCC-CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 28 QTLAYEEVRSSSDRPY-TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~-~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
.+++|.+.|+. + +|+|||+||+++++..|..+++.|++ .||+||++|+||||.|+.+.. ...|+++
T Consensus 34 ~~l~y~~~G~~----~~g~~vvllHG~~~~~~~w~~~~~~L~~--------~g~rvia~Dl~G~G~S~~~~~-~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS----DAEDVFLCLHGEPTWSYLYRKMIPVFAE--------SGARVIAPDFFGFGKSDKPVD-EEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT----TCSCEEEECCCTTCCGGGGTTTHHHHHH--------TTCEEEEECCTTSTTSCEESC-GGGCCHH
T ss_pred eEEEEEEeCCC----CCCCEEEEECCCCCchhhHHHHHHHHHh--------CCCeEEEeCCCCCCCCCCCCC-cCCcCHH
Confidence 89999998852 3 68999999999999999999999996 679999999999999987642 0368999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC---------CchhH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE---------NSEGE 177 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~---------~~~~~ 177 (325)
++++|+.+++++++++ +++||||||||.+|+.+|.++|+ +|+++|++++........ .....
T Consensus 101 ~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~va~~~A~~~P~--------rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (310)
T 1b6g_A 101 FHRNFLLALIERLDLR-NITLVVQDWGGFLGLTLPMADPS--------RFKRLIIMNAXLMTDPVTQPAFSAFVTQPADG 171 (310)
T ss_dssp HHHHHHHHHHHHHTCC-SEEEEECTHHHHHHTTSGGGSGG--------GEEEEEEESCCCCCCTTTCTHHHHTTTSSTTT
T ss_pred HHHHHHHHHHHHcCCC-CEEEEEcChHHHHHHHHHHhChH--------hheEEEEeccccccCCccccchhhhhhccchH
Confidence 9999999999999999 99999999999999999999999 999999999854211100 00000
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc------CCcccccc
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR------EMSYWPLL 251 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 251 (325)
...+...... ..... ......... ........+........... ............... ..+.+..+
T Consensus 172 ~~~~~~~~~~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (310)
T 1b6g_A 172 FTAWKYDLVT-PSDLR-LDQFMKRWA-PTLTEAEASAYAAPFPDTSY----QAGVRKFPKMVAQRDQAXIDISTEAISFW 244 (310)
T ss_dssp HHHHHHHHHS-CSSCC-HHHHHHHHS-TTCCHHHHHHHHTTCSSGGG----CHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc-Cchhh-hhhHHhhcC-CCCCHHHHHHHhcccCCccc----hHHHHHHHHHhcccccchhhhhhhHhhhh
Confidence 1111111111 11111 100100000 11111111111111100000 000000111000000 00122344
Q ss_pred c-CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEe--cCCCccccccChHHHHHHHHHHHhc
Q 020518 252 E-HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVL--PNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
. .++ +|+|+|+|++|..++ ...+.+.+.+++ ++++++ ++|||++++ +|++|++.|.+||++
T Consensus 245 ~~~i~--~P~Lvi~G~~D~~~~-~~~~~~~~~ip~--------~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 245 QNDWN--GQTFMAIGMKDKLLG-PDVMYPMKALIN--------GCPEPLEIADAGHFVQE-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHTCC--SEEEEEEETTCSSSS-HHHHHHHHHHST--------TCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHH
T ss_pred hcccc--CceEEEeccCcchhh-hHHHHHHHhccc--------ccceeeecCCcccchhh-ChHHHHHHHHHHHhc
Confidence 5 555 899999999999998 777888887776 777777 999999999 999999999999975
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=255.14 Aligned_cols=251 Identities=12% Similarity=0.112 Sum_probs=167.3
Q ss_pred cceEEEEcccCCCCCC-CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 28 QTLAYEEVRSSSDRPY-TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~-~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
.+++|.+.|+. + +++|||+||+++++..|..+++.|++ .||+||++|+||||.|+.+.. ...|+++
T Consensus 33 ~~l~y~~~G~~----~~g~~vvllHG~~~~~~~w~~~~~~L~~--------~g~rvia~Dl~G~G~S~~~~~-~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR----DAEHTFLCLHGEPSWSFLYRKMLPVFTA--------AGGRVVAPDLFGFGRSDKPTD-DAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT----TCSCEEEEECCTTCCGGGGTTTHHHHHH--------TTCEEEEECCTTSTTSCEESC-GGGCCHH
T ss_pred eEEEEEEccCC----CCCCeEEEECCCCCcceeHHHHHHHHHh--------CCcEEEEeCCCCCCCCCCCCC-cccCCHH
Confidence 89999998852 3 68999999999999999999999986 689999999999999987642 0368999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
++++|+.+++++++++ +++||||||||.+|+.+|.++|+ +|+++|++++.... ..........+.....
T Consensus 100 ~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~va~~~A~~~P~--------~v~~lvl~~~~~~~--~~~~~~~~~~~~~~~~ 168 (297)
T 2xt0_A 100 FHRRSLLAFLDALQLE-RVTLVCQDWGGILGLTLPVDRPQ--------LVDRLIVMNTALAV--GLSPGKGFESWRDFVA 168 (297)
T ss_dssp HHHHHHHHHHHHHTCC-SEEEEECHHHHHHHTTHHHHCTT--------SEEEEEEESCCCCS--SSCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEECchHHHHHHHHHhChH--------HhcEEEEECCCCCc--ccCCchhHHHHHHHhh
Confidence 9999999999999999 99999999999999999999999 99999999985411 1110111111111111
Q ss_pred cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc----------CCccccccc-CCC
Q 020518 187 SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR----------EMSYWPLLE-HPP 255 (325)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~~ 255 (325)
. ..... ......... ................... . ......+..... ..+.+..+. .++
T Consensus 169 ~-~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 238 (297)
T 2xt0_A 169 N-SPDLD-VGKLMQRAI-PGITDAEVAAYDAPFPGPE----F---KAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWS 238 (297)
T ss_dssp T-CTTCC-HHHHHHHHS-TTCCHHHHHHHHTTCSSGG----G---CHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCC
T ss_pred c-ccccc-hhHHHhccC-ccCCHHHHHHHhccccCcc----h---hHHHHHHHHhCccccccchhhHHHHHHHHhhhccC
Confidence 1 11111 111111100 1111111111111100000 0 000000000000 001223344 554
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEE--EecCCCccccccChHHHHHHHHHHHhc
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVH--VLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|+|+|+|++|..++ ...+.+.+.+++ ++++ .+++|||++++ +|++|++.|.+||++
T Consensus 239 --~P~Lvi~G~~D~~~~-~~~~~~~~~~p~--------~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~~ 297 (297)
T 2xt0_A 239 --GPTFMAVGAQDPVLG-PEVMGMLRQAIR--------GCPEPMIVEAGGHFVQE-HGEPIARAALAAFGQ 297 (297)
T ss_dssp --SCEEEEEETTCSSSS-HHHHHHHHHHST--------TCCCCEEETTCCSSGGG-GCHHHHHHHHHHTTC
T ss_pred --CCeEEEEeCCCcccC-hHHHHHHHhCCC--------CeeEEeccCCCCcCccc-CHHHHHHHHHHHHhC
Confidence 899999999999988 777778777776 5544 37899999999 999999999999863
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=253.76 Aligned_cols=250 Identities=21% Similarity=0.259 Sum_probs=170.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCC-ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC-CCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE-IEGLDPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~-~~~~~~~~ 103 (325)
+|.+++|...|+. ++|+|||+||+++++. .|..+++.|+ ++|+|+++|+||||.|+. +... ..+
T Consensus 11 ~g~~l~~~~~G~~----~~~~vvllHG~~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~~~-~~~ 76 (286)
T 2yys_A 11 GEAELYVEDVGPV----EGPALFVLHGGPGGNAYVLREGLQDYL---------EGFRVVYFDQRGSGRSLELPQDP-RLF 76 (286)
T ss_dssp SSCEEEEEEESCT----TSCEEEEECCTTTCCSHHHHHHHGGGC---------TTSEEEEECCTTSTTSCCCCSCG-GGC
T ss_pred CCEEEEEEeecCC----CCCEEEEECCCCCcchhHHHHHHHHhc---------CCCEEEEECCCCCCCCCCCccCc-ccC
Confidence 6789999998862 4789999999999999 8999998886 789999999999999987 4310 168
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ |+++|++++.+.. .........
T Consensus 77 ~~~~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~---------v~~lvl~~~~~~~------~~~~~~~~~ 140 (286)
T 2yys_A 77 TVDALVEDTLLLAEALGVE-RFGLLAHGFGAVVALEVLRRFPQ---------AEGAILLAPWVNF------PWLAARLAE 140 (286)
T ss_dssp CHHHHHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHCTT---------EEEEEEESCCCBH------HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCC-cEEEEEeCHHHHHHHHHHHhCcc---------hheEEEeCCccCc------HHHHHHHHH
Confidence 9999999999999999999 99999999999999999999985 8999999986411 000001100
Q ss_pred HhhcCCCCC-----------CcHHHHHHHHHhhccch---hHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 184 TLQSLPSSI-----------PSRKWLVNHMMELGFSK---SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 184 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
......... .........+. .+.. .............. ........ .+......+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~ 212 (286)
T 2yys_A 141 AAGLAPLPDPEENLKEALKREEPKALFDRLM--FPTPRGRMAYEWLAEGAGILG-----SDAPGLAF-LRNGLWRLDYTP 212 (286)
T ss_dssp HTTCCCCSCHHHHHHHHHHHSCHHHHHHHHH--CSSHHHHHHHHHHHHHTTCCC-----CSHHHHHH-HHTTGGGCBCGG
T ss_pred HhccccchhHHHHHHHHhccCChHHHHHhhh--ccCCccccChHHHHHHHhhcc-----ccccchhh-cccccccCChhh
Confidence 000000000 00000111111 0000 00011111110000 00000000 122222233445
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+.+++ +|+++|+|++|..++++ .+.+.+ +++ +++++++++||++++|+|++|++.|.+||+.+
T Consensus 213 ~l~~i~--~P~lvi~G~~D~~~~~~-~~~~~~-~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 213 YLTPER--RPLYVLVGERDGTSYPY-AEEVAS-RLR--------APIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp GCCCCS--SCEEEEEETTCTTTTTT-HHHHHH-HHT--------CCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred hhhhcC--CCEEEEEeCCCCcCCHh-HHHHHh-CCC--------CCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 556655 89999999999999998 888888 776 89999999999999999999999999999763
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=253.93 Aligned_cols=250 Identities=16% Similarity=0.158 Sum_probs=170.3
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHH-HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFS-RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~-~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+++|...|+ +++|||+||++ ++...|..++ +.|+ ++|+|+++|+||||.|+.+.. ..+
T Consensus 23 ~~l~y~~~G~------g~~vvllHG~~~~~~~~~~w~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~~~--~~~ 85 (286)
T 2puj_A 23 FNIHYNEAGN------GETVIMLHGGGPGAGGWSNYYRNVGPFVD---------AGYRVILKDSPGFNKSDAVVM--DEQ 85 (286)
T ss_dssp EEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHHH---------TTCEEEEECCTTSTTSCCCCC--SSC
T ss_pred EEEEEEecCC------CCcEEEECCCCCCCCcHHHHHHHHHHHHh---------ccCEEEEECCCCCCCCCCCCC--cCc
Confidence 7899999874 57999999997 6777888888 8888 569999999999999998753 368
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC--chhHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN--SEGEVEKV 181 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~~ 181 (325)
+++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++......... ........
T Consensus 86 ~~~~~a~dl~~~l~~l~~~-~~~lvGhS~GG~va~~~A~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T 2puj_A 86 RGLVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEYPD--------RIGKLILMGPGGLGPSMFAPMPMEGIKLL 156 (286)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCSCCCCCSSSCSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCC-ceEEEEECHHHHHHHHHHHhChH--------hhheEEEECccccCCCcccccchhhHHHH
Confidence 9999999999999999999 99999999999999999999999 9999999998653221100 11112222
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchh-H-HHHHhhcccCCCcccccccChhHHHHhhh----cc-cCCcccccccCC
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKS-L-SEWIGTNLKKSGERETWAFNLDGAVQMFN----SY-REMSYWPLLEHP 254 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~ 254 (325)
...+.. +........+........ . .+........ ............. .. ...+....+.++
T Consensus 157 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 225 (286)
T 2puj_A 157 FKLYAE-----PSYETLKQMLQVFLYDQSLITEELLQGRWEA------IQRQPEHLKNFLISAQKAPLSTWDVTARLGEI 225 (286)
T ss_dssp HHHHHS-----CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHH------HHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGC
T ss_pred HHHhhC-----CcHHHHHHHHHHHhcCCccCCHHHHHHHHHH------hhcCHHHHHHHHHHHhhhhccccchhhHHhhc
Confidence 221110 111111111110000000 0 0000000000 0000111111111 00 112233455555
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 255 PQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||++
T Consensus 226 ~--~P~Lii~G~~D~~~p~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 226 K--AKTFITWGRDDRFVPLDHGLKLLWNIDD--------ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp C--SCEEEEEETTCSSSCTHHHHHHHHHSSS--------EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred C--CCEEEEEECCCCccCHHHHHHHHHHCCC--------CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 5 8999999999999999888888777765 9999999999999999999999999999974
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=247.89 Aligned_cols=251 Identities=16% Similarity=0.194 Sum_probs=170.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|..+|+. ++++|||+||++++...|..+++.|.+ +||+|+++|+||||.|..+. ..++
T Consensus 6 ~~g~~l~y~~~g~~----~~~~vvllHG~~~~~~~w~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 70 (275)
T 1a88_A 6 SDGTNIFYKDWGPR----DGLPVVFHHGWPLSADDWDNQMLFFLS--------HGYRVIAHDRRGHGRSDQPS---TGHD 70 (275)
T ss_dssp TTSCEEEEEEESCT----TSCEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCS
T ss_pred cCCCEEEEEEcCCC----CCceEEEECCCCCchhhHHHHHHHHHH--------CCceEEEEcCCcCCCCCCCC---CCCC
Confidence 46889999998852 468999999999999999999999987 78999999999999998764 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCC-CC-----chhH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKT-EN-----SEGE 177 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~-~~-----~~~~ 177 (325)
++++++|+.+++++++.+ +++|+||||||.+++.+++++ |+ +|+++|++++.+..... .. ....
T Consensus 71 ~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 141 (275)
T 1a88_A 71 MDTYAADVAALTEALDLR-GAVHIGHSTGGGEVARYVARAEPG--------RVAKAVLVSAVPPVMVKSDTNPDGLPLEV 141 (275)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHSCTT--------SEEEEEEESCCCSCCBCBTTBTTSBCHHH
T ss_pred HHHHHHHHHHHHHHcCCC-ceEEEEeccchHHHHHHHHHhCch--------heEEEEEecCCCcccccCccCcccCCHHH
Confidence 999999999999999999 999999999999999988887 99 99999999976432210 00 0011
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHh-hc---------cchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMME-LG---------FSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
.......+.. ........+.. .. ..+. ...+..... .............+...+
T Consensus 142 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 206 (275)
T 1a88_A 142 FDEFRAALAA------NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM---------MGAANAHYECIAAFSETD 206 (275)
T ss_dssp HHHHHHHHHH------CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---------HSCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhh------hHHHHHHhhhccccccccCcccccCHHHHHHHHHHhh---------hcchHhHHHHHhhhhhcc
Confidence 1111111000 00000000000 00 0000 000000000 000111111111122223
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+.+++ +|+++|+|++|..++++ ..+.+.+..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 207 ~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 207 FTDDLKRID--VPVLVAHGTDDQVVPYADAAPKSAELLAN--------ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp CHHHHHHCC--SCEEEEEETTCSSSCSTTTHHHHHHHSTT--------EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred cccccccCC--CCEEEEecCCCccCCcHHHHHHHHhhCCC--------cEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 334455555 89999999999999886 44455555554 9999999999999999999999999999964
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=254.35 Aligned_cols=253 Identities=17% Similarity=0.197 Sum_probs=171.8
Q ss_pred cc-cceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC
Q 020518 26 SL-QTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP 101 (325)
Q Consensus 26 ~~-~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 101 (325)
+| .+++|...|++ .+|+|||+||++ ++...|..+++.|+ ++|+|+++|+||||.|+.+.. .
T Consensus 21 ~g~~~l~y~~~G~g----~~~~vvllHG~~pg~~~~~~w~~~~~~L~---------~~~~via~Dl~G~G~S~~~~~--~ 85 (291)
T 2wue_A 21 DGPLKLHYHEAGVG----NDQTVVLLHGGGPGAASWTNFSRNIAVLA---------RHFHVLAVDQPGYGHSDKRAE--H 85 (291)
T ss_dssp SSEEEEEEEEECTT----CSSEEEEECCCCTTCCHHHHTTTTHHHHT---------TTSEEEEECCTTSTTSCCCSC--C
T ss_pred CCcEEEEEEecCCC----CCCcEEEECCCCCccchHHHHHHHHHHHH---------hcCEEEEECCCCCCCCCCCCC--C
Confidence 67 89999998852 246999999997 77778988888888 569999999999999988753 3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC--chhHHH
Q 020518 102 PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN--SEGEVE 179 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~ 179 (325)
.++++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++......... ......
T Consensus 86 ~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~A~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~ 156 (291)
T 2wue_A 86 GQFNRYAAMALKGLFDQLGLG-RVPLVGNALGGGTAVRFALDYPA--------RAGRLVLMGPGGLSINLFAPDPTEGVK 156 (291)
T ss_dssp SSHHHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHSTT--------TEEEEEEESCSSSCCCSSSCSSCHHHH
T ss_pred CcCHHHHHHHHHHHHHHhCCC-CeEEEEEChhHHHHHHHHHhChH--------hhcEEEEECCCCCCccccccccchhhH
Confidence 789999999999999999999 99999999999999999999999 9999999998653221101 011112
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchh-H-HHHHhhcccCCCcccccccChhHHHHhhhc---cc-----CCcccc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKS-L-SEWIGTNLKKSGERETWAFNLDGAVQMFNS---YR-----EMSYWP 249 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~ 249 (325)
.....+.. .........+........ . .+......... .+......++.. +. ....+.
T Consensus 157 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
T 2wue_A 157 RLSKFSVA-----PTRENLEAFLRVMVYDKNLITPELVDQRFALA-------STPESLTATRAMGKSFAGADFEAGMMWR 224 (291)
T ss_dssp HHHHHHHS-----CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHH-------TSHHHHHHHHHHHHHHTSTTGGGGCGGG
T ss_pred HHHHHhcc-----CCHHHHHHHHHHhccCcccCCHHHHHHHHHHh-------cCchHHHHHHHHHhhccccccccchhHH
Confidence 22111110 111111111110000000 0 00000000000 001111111110 00 012224
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+.+++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||+.
T Consensus 225 ~l~~i~--~P~lvi~G~~D~~~~~~~~~~~~~~~p~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 225 EVYRLR--QPVLLIWGREDRVNPLDGALVALKTIPR--------AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp TGGGCC--SCEEEEEETTCSSSCGGGGHHHHHHSTT--------EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHhhCC--CCeEEEecCCCCCCCHHHHHHHHHHCCC--------CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 555555 8999999999999999888777777765 9999999999999999999999999999964
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=257.29 Aligned_cols=253 Identities=14% Similarity=0.189 Sum_probs=169.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|.+.|++ .+|+|||+||+++++..|..+++.|+ ++|+||++|+||||.|+.+. ..+++
T Consensus 15 ~g~~l~y~~~G~g----~~~pvvllHG~~~~~~~w~~~~~~L~---------~~~~via~Dl~G~G~S~~~~---~~~~~ 78 (316)
T 3afi_E 15 LGSSMAYRETGAQ----DAPVVLFLHGNPTSSHIWRNILPLVS---------PVAHCIAPDLIGFGQSGKPD---IAYRF 78 (316)
T ss_dssp TTEEEEEEEESCT----TSCEEEEECCTTCCGGGGTTTHHHHT---------TTSEEEEECCTTSTTSCCCS---SCCCH
T ss_pred CCEEEEEEEeCCC----CCCeEEEECCCCCchHHHHHHHHHHh---------hCCEEEEECCCCCCCCCCCC---CCCCH
Confidence 6789999998862 23599999999999999999999998 56999999999999998754 57999
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC-CCc-----h----
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT-ENS-----E---- 175 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~-~~~-----~---- 175 (325)
+++++|+.+++++++++ +++||||||||.+|+.+|.++|+ +|+++|++++....... ... .
T Consensus 79 ~~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~va~~~A~~~P~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (316)
T 3afi_E 79 FDHVRYLDAFIEQRGVT-SAYLVAQDWGTALAFHLAARRPD--------FVRGLAFMEFIRPMPTWQDFHHTEVAEEQDH 149 (316)
T ss_dssp HHHHHHHHHHHHHTTCC-SEEEEEEEHHHHHHHHHHHHCTT--------TEEEEEEEEECCCBSSGGGTTCCCCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCC-CEEEEEeCccHHHHHHHHHHCHH--------hhhheeeeccCCCcchhhhccchhhcccccc
Confidence 99999999999999999 99999999999999999999999 99999999974321100 000 0
Q ss_pred -hHHHHHHHHhhcCCCCCCcHH------HHHHHHHhh----ccch-hHHHHHhhcccCCCcccccccChhHHHHhhhccc
Q 020518 176 -GEVEKVLQTLQSLPSSIPSRK------WLVNHMMEL----GFSK-SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (325)
.........+.. ...... .+....... .... ....+... ..... .............
T Consensus 150 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~ 218 (316)
T 3afi_E 150 AEAARAVFRKFRT---PGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTP-FPTPE-------SRRPVLAFPRELP 218 (316)
T ss_dssp HHHHHHHHHHHTS---TTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTT-CCSTG-------GGHHHHHTGGGSC
T ss_pred chhHHHHHHHhcC---CchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhh-cCCcc-------chhHHHHHHHhcc
Confidence 011111111110 000000 000000000 0000 01111110 00000 0001111111100
Q ss_pred C-----------CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH
Q 020518 244 E-----------MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK 312 (325)
Q Consensus 244 ~-----------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 312 (325)
. .+....+.+++ +|+++|+|++|..++++..+.+.+.+++ ++++++++|||++++|+|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~l~~i~--~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--------~~~~~i~~~GH~~~~e~p~ 288 (316)
T 3afi_E 219 IAGEPADVYEALQSAHAALAASS--YPKLLFTGEPGALVSPEFAERFAASLTR--------CALIRLGAGLHYLQEDHAD 288 (316)
T ss_dssp BTTBSHHHHHHHHHHHHHHHHCC--SCEEEEEEEECSSSCHHHHHHHHHHSSS--------EEEEEEEEECSCHHHHHHH
T ss_pred ccccchhhhhHHHHHHHhhhccC--CCeEEEecCCCCccCHHHHHHHHHhCCC--------CeEEEcCCCCCCchhhCHH
Confidence 0 00112233444 8999999999999999888888887776 9999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 020518 313 GLLEIVAPRIAS 324 (325)
Q Consensus 313 ~~~~~i~~fl~~ 324 (325)
+|++.|.+||+.
T Consensus 289 ~~~~~i~~fl~~ 300 (316)
T 3afi_E 289 AIGRSVAGWIAG 300 (316)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999999974
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=247.09 Aligned_cols=249 Identities=18% Similarity=0.202 Sum_probs=169.5
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|. +++|||+||++++...|..+++.|.+ .||+|+++|+||||.|..+. ..++
T Consensus 6 ~~g~~l~y~~~g~------~~~vvllHG~~~~~~~~~~~~~~L~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 68 (273)
T 1a8s_A 6 RDGTQIYYKDWGS------GQPIVFSHGWPLNADSWESQMIFLAA--------QGYRVIAHDRRGHGRSSQPW---SGND 68 (273)
T ss_dssp TTSCEEEEEEESC------SSEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCS
T ss_pred CCCcEEEEEEcCC------CCEEEEECCCCCcHHHHhhHHhhHhh--------CCcEEEEECCCCCCCCCCCC---CCCC
Confidence 4688999999874 67899999999999999999999987 78999999999999998764 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC--C----chhH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE--N----SEGE 177 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~--~----~~~~ 177 (325)
++++++|+.+++++++.+ +++|+||||||.+++.+++++ |+ +|+++|++++.+...... . ....
T Consensus 69 ~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 139 (273)
T 1a8s_A 69 MDTYADDLAQLIEHLDLR-DAVLFGFSTGGGEVARYIGRHGTA--------RVAKAGLISAVPPLMLKTEANPGGLPMEV 139 (273)
T ss_dssp HHHHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred HHHHHHHHHHHHHHhCCC-CeEEEEeChHHHHHHHHHHhcCch--------heeEEEEEcccCcccccCccccccCcHHH
Confidence 999999999999999999 999999999999999988887 88 999999999754321100 0 0001
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHh-hcc---------chh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMME-LGF---------SKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
.......+.. ........+.. ..+ ... ...+..... ..........+..+...+
T Consensus 140 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 204 (273)
T 1a8s_A 140 FDGIRQASLA------DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM---------AAGHKNAYDCIKAFSETD 204 (273)
T ss_dssp HHHHHHHHHH------HHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH---------HSCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhHh------hHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcc---------ccchhHHHHHHHHHhccC
Confidence 1111000000 00000000000 000 000 000000000 000111111111122223
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+.+++ +|+++|+|++|..++++ ..+.+.+..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 205 ~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 205 FTEDLKKID--VPTLVVHGDADQVVPIEASGIASAALVKG--------STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp CHHHHHTCC--SCEEEEEETTCSSSCSTTTHHHHHHHSTT--------CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred hhhhhhcCC--CCEEEEECCCCccCChHHHHHHHHHhCCC--------cEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 344556665 89999999999999886 44555566554 8999999999999999999999999999964
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=246.53 Aligned_cols=249 Identities=14% Similarity=0.218 Sum_probs=169.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|..+|. +++|||+||++++...|..+++.|.+ .||+|+++|+||||.|..+. ..++
T Consensus 6 ~~g~~l~y~~~g~------g~~vvllHG~~~~~~~w~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 68 (274)
T 1a8q_A 6 RDGVEIFYKDWGQ------GRPVVFIHGWPLNGDAWQDQLKAVVD--------AGYRGIAHDRRGHGHSTPVW---DGYD 68 (274)
T ss_dssp TTSCEEEEEEECS------SSEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCS
T ss_pred cCCCEEEEEecCC------CceEEEECCCcchHHHHHHHHHHHHh--------CCCeEEEEcCCCCCCCCCCC---CCCc
Confidence 4688999998874 67899999999999999999999987 78999999999999998764 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC--C----chhH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE--N----SEGE 177 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~--~----~~~~ 177 (325)
++++++|+.+++++++.+ +++|+||||||.+++.+++++ |+ +|+++|++++.+...... . ....
T Consensus 69 ~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 139 (274)
T 1a8q_A 69 FDTFADDLNDLLTDLDLR-DVTLVAHSMGGGELARYVGRHGTG--------RLRSAVLLSAIPPVMIKSDKNPDGVPDEV 139 (274)
T ss_dssp HHHHHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred HHHHHHHHHHHHHHcCCC-ceEEEEeCccHHHHHHHHHHhhhH--------heeeeeEecCCCccccccccCcccchHHH
Confidence 999999999999999999 999999999999999988887 88 999999999754321100 0 0011
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhh----c-----cchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMEL----G-----FSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
.......+.. ........+... . .... ...+..... ..........+..+...+.
T Consensus 140 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 204 (274)
T 1a8q_A 140 FDALKNGVLT------ERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAM---------AQTIEGGVRCVDAFGYTDF 204 (274)
T ss_dssp HHHHHHHHHH------HHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHT---------TSCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhc------cHHHHHHHhcccccccccccccccHHHHHHHHHHhh---------hcChHHHHHHHhhhhcCcH
Confidence 1111110000 000000000000 0 0000 000000000 0001111111111222334
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc--ChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD--NPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 324 (325)
...+.+++ +|+++|+|++|..++++ ..+.+.+..++ +++++++++||++++| +|+++++.|.+||++
T Consensus 205 ~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 205 TEDLKKFD--IPTLVVHGDDDQVVPIDATGRKSAQIIPN--------AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHHHTTCC--SCEEEEEETTCSSSCGGGTHHHHHHHSTT--------CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHHhhcCC--CCEEEEecCcCCCCCcHHHHHHHHhhCCC--------ceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 44556665 89999999999999987 44455555554 8999999999999999 999999999999964
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=252.95 Aligned_cols=243 Identities=16% Similarity=0.239 Sum_probs=167.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|.+++|.+.|. +++|||+||++.+.. .|..+++.|+ ++|+|+++|+||||.|+.+.. ..
T Consensus 13 ~g~~l~y~~~G~------g~~vvllHG~~~~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~--~~ 75 (282)
T 1iup_A 13 AGVLTNYHDVGE------GQPVILIHGSGPGVSAYANWRLTIPALS---------KFYRVIAPDMVGFGFTDRPEN--YN 75 (282)
T ss_dssp TTEEEEEEEECC------SSEEEEECCCCTTCCHHHHHTTTHHHHT---------TTSEEEEECCTTSTTSCCCTT--CC
T ss_pred CCEEEEEEecCC------CCeEEEECCCCCCccHHHHHHHHHHhhc---------cCCEEEEECCCCCCCCCCCCC--CC
Confidence 578999999874 578999999987665 6777777775 789999999999999988753 46
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
++++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++....... .......
T Consensus 76 ~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~GG~ia~~~A~~~P~--------~v~~lvl~~~~~~~~~~---~~~~~~~- 142 (282)
T 1iup_A 76 YSKDSWVDHIIGIMDALEIE-KAHIVGNAFGGGLAIATALRYSE--------RVDRMVLMGAAGTRFDV---TEGLNAV- 142 (282)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHSGG--------GEEEEEEESCCCSCCCC---CHHHHHH-
T ss_pred CCHHHHHHHHHHHHHHhCCC-ceEEEEECHhHHHHHHHHHHChH--------HHHHHHeeCCccCCCCC---CHHHHHH-
Confidence 89999999999999999999 99999999999999999999999 99999999986532211 1111111
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhc-----cchhH-HHHHhhcccCCCcccccccChhHHHHhhh--------cccCCccc
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELG-----FSKSL-SEWIGTNLKKSGERETWAFNLDGAVQMFN--------SYREMSYW 248 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 248 (325)
... ..........+.... ..... ....... ..... ...+..+.. .+.. ..
T Consensus 143 ---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~ 206 (282)
T 1iup_A 143 ---WGY---TPSIENMRNLLDIFAYDRSLVTDELARLRYEAS-IQPGF-------QESFSSMFPEPRQRWIDALAS--SD 206 (282)
T ss_dssp ---HTC---CSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHH-TSTTH-------HHHHHHHSCSSTHHHHHHHCC--CH
T ss_pred ---hcC---CCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhc-cChHH-------HHHHHHHHhcccccccccccc--ch
Confidence 111 011111111110000 00000 0000000 00000 000001100 0000 01
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||+.
T Consensus 207 ~~l~~i~--~P~lii~G~~D~~~p~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 207 EDIKTLP--NETLIIHGREDQVVPLSSSLRLGELIDR--------AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp HHHTTCC--SCEEEEEETTCSSSCHHHHHHHHHHCTT--------EEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred hhhhhcC--CCEEEEecCCCCCCCHHHHHHHHHhCCC--------CeEEEECCCCCCccccCHHHHHHHHHHHHhc
Confidence 3445554 8999999999999999888888777765 9999999999999999999999999999975
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=252.62 Aligned_cols=255 Identities=14% Similarity=0.148 Sum_probs=161.4
Q ss_pred ccccceEEEEc--ccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEV--RSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~--~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|.+++|.+. |. .+|+|||+||+++++..|..+++.|+ ++|+||++|+||||.|+.+. ..
T Consensus 11 ~~g~~l~y~~~~~G~-----~~p~vvllHG~~~~~~~w~~~~~~L~---------~~~rvia~DlrGhG~S~~~~---~~ 73 (276)
T 2wj6_A 11 VFDNKLSYIDNQRDT-----DGPAILLLPGWCHDHRVYKYLIQELD---------ADFRVIVPNWRGHGLSPSEV---PD 73 (276)
T ss_dssp ETTEEEEEEECCCCC-----SSCEEEEECCTTCCGGGGHHHHHHHT---------TTSCEEEECCTTCSSSCCCC---CC
T ss_pred eCCeEEEEEEecCCC-----CCCeEEEECCCCCcHHHHHHHHHHHh---------cCCEEEEeCCCCCCCCCCCC---CC
Confidence 36789999998 64 25899999999999999999999998 67999999999999998764 57
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
|+++++++|+.+++++++++ +++|+||||||.+|+.+|.++ |+ +|+++|++++...... .. ....
T Consensus 74 ~~~~~~a~dl~~ll~~l~~~-~~~lvGhSmGG~va~~~A~~~~P~--------rv~~lvl~~~~~~~~~----~~-~~~~ 139 (276)
T 2wj6_A 74 FGYQEQVKDALEILDQLGVE-TFLPVSHSHGGWVLVELLEQAGPE--------RAPRGIIMDWLMWAPK----PD-FAKS 139 (276)
T ss_dssp CCHHHHHHHHHHHHHHHTCC-SEEEEEEGGGHHHHHHHHHHHHHH--------HSCCEEEESCCCSSCC----HH-HHHH
T ss_pred CCHHHHHHHHHHHHHHhCCC-ceEEEEECHHHHHHHHHHHHhCHH--------hhceEEEecccccCCC----ch-HHHH
Confidence 99999999999999999999 999999999999999999999 99 9999999997532111 11 1111
Q ss_pred HHHhhcCCCCCC-cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 182 LQTLQSLPSSIP-SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 182 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
...+... .... ....+...+..........+.+........ ...+..........+... ......+..++ +|+
T Consensus 140 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~--~P~ 213 (276)
T 2wj6_A 140 LTLLKDP-ERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYG-YDCWGRSGRVIEDAYGRN--GSPMQMMANLT--KTR 213 (276)
T ss_dssp HHHHHCT-TTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCC-HHHHHHHHHHHHHHHHHH--CCHHHHHHTCS--SCC
T ss_pred hhhccCc-chHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcc-hhhhhhccchhHHHHhhc--cchhhHHhhcC--CCc
Confidence 1111100 0000 000111111111111111111111111000 000000000000011000 01122345555 677
Q ss_pred EEEeeCCCCCCC--hHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWD--PDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++++|..++..+ ....+.+.+.+++ ++++++++|||++++|+|++|++.|.+||++
T Consensus 214 lv~~~~~~~~~~~~~~~~~~~~~~~p~--------a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 214 PIRHIFSQPTEPEYEKINSDFAEQHPW--------FSYAKLGGPTHFPAIDVPDRAAVHIREFATA 271 (276)
T ss_dssp CEEEEECCSCSHHHHHHHHHHHHHCTT--------EEEEECCCSSSCHHHHSHHHHHHHHHHHHHH
T ss_pred eEEEEecCccchhHHHHHHHHHhhCCC--------eEEEEeCCCCCcccccCHHHHHHHHHHHHhh
Confidence 777653332222 1233444444444 9999999999999999999999999999975
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=244.77 Aligned_cols=237 Identities=17% Similarity=0.222 Sum_probs=165.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCC-CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS-GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
+|.+++|...|++ +++|||+||++++ ...|..+++.|.+ .||+|+++|+||||.|..+. ..++
T Consensus 10 ~g~~l~~~~~g~~-----~~~vvllHG~~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 73 (254)
T 2ocg_A 10 NGVQLHYQQTGEG-----DHAVLLLPGMLGSGETDFGPQLKNLNK--------KLFTVVAWDPRGYGHSRPPD---RDFP 73 (254)
T ss_dssp TTEEEEEEEEECC-----SEEEEEECCTTCCHHHHCHHHHHHSCT--------TTEEEEEECCTTSTTCCSSC---CCCC
T ss_pred CCEEEEEEEecCC-----CCeEEEECCCCCCCccchHHHHHHHhh--------CCCeEEEECCCCCCCCCCCC---CCCC
Confidence 6788999998853 4689999999888 6778899888875 67999999999999998754 3556
Q ss_pred ---HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 105 ---IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 105 ---~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
+.+.++++.+++++++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++..... .. ....
T Consensus 74 ~~~~~~~~~~~~~~l~~l~~~-~~~l~GhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~-----~~-~~~~ 138 (254)
T 2ocg_A 74 ADFFERDAKDAVDLMKALKFK-KVSLLGWSDGGITALIAAAKYPS--------YIHKMVIWGANAYVT-----DE-DSMI 138 (254)
T ss_dssp TTHHHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCSBCC-----HH-HHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCC-CEEEEEECHhHHHHHHHHHHChH--------HhhheeEeccccccC-----hh-hHHH
Confidence 788999999999999998 99999999999999999999999 999999998754221 00 0111
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhh----ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMEL----GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
...+.... ... ......+... ........|.. .................+.+++
T Consensus 139 ~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~i~-- 196 (254)
T 2ocg_A 139 YEGIRDVS-KWS--ERTRKPLEALYGYDYFARTCEKWVD-----------------GIRQFKHLPDGNICRHLLPRVQ-- 196 (254)
T ss_dssp HHTTSCGG-GSC--HHHHHHHHHHHCHHHHHHHHHHHHH-----------------HHHGGGGSGGGBSSGGGGGGCC--
T ss_pred HHHHHHHH-HHH--HHhHHHHHHHhcchhhHHHHHHHHH-----------------HHHHHHhccCCchhhhhhhccc--
Confidence 11110000 000 0010000000 00000011110 0011111001111233445554
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||+
T Consensus 197 ~P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 197 CPALIVHGEKDPLVPRFHADFIHKHVKG--------SRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHSTT--------CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCccCCHHHHHHHHHhCCC--------CEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 8999999999999999888888777765 899999999999999999999999999984
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=251.73 Aligned_cols=248 Identities=16% Similarity=0.262 Sum_probs=166.4
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
+.+++|.+.|. +++|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+.. ..++++
T Consensus 5 ~~~~~y~~~G~------g~~vvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~--~~~~~~ 67 (269)
T 2xmz_A 5 HYKFYEANVET------NQVLVFLHGFLSDSRTYHNHIEKFT---------DNYHVITIDLPGHGEDQSSMD--ETWNFD 67 (269)
T ss_dssp SEEEECCSSCC------SEEEEEECCTTCCGGGGTTTHHHHH---------TTSEEEEECCTTSTTCCCCTT--SCCCHH
T ss_pred cceEEEEEcCC------CCeEEEEcCCCCcHHHHHHHHHHHh---------hcCeEEEecCCCCCCCCCCCC--CccCHH
Confidence 56788887765 5689999999999999999999998 569999999999999988653 268999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH--H
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ--T 184 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~--~ 184 (325)
++++|+.+++++++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++.+..... ......... .
T Consensus 68 ~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~ 135 (269)
T 2xmz_A 68 YITTLLDRILDKYKDK-SITLFGYSMGGRVALYYAINGHI--------PISNLILESTSPGIKEE---ANQLERRLVDDA 135 (269)
T ss_dssp HHHHHHHHHHGGGTTS-EEEEEEETHHHHHHHHHHHHCSS--------CCSEEEEESCCSCCSSH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC-cEEEEEECchHHHHHHHHHhCch--------heeeeEEEcCCcccCCc---hhHHHHhhhhhH
Confidence 9999999999999999 99999999999999999999999 99999999976533211 000000000 0
Q ss_pred hhcCCCCCCcHHHHHHHHHhh-cc------chhHH-HHHhhcccCCCcccccccChhHHHHhhhc---ccCCcccccccC
Q 020518 185 LQSLPSSIPSRKWLVNHMMEL-GF------SKSLS-EWIGTNLKKSGERETWAFNLDGAVQMFNS---YREMSYWPLLEH 253 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 253 (325)
+...... .....+...+... .+ ..... .+..... ..........+.. ....+....+..
T Consensus 136 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 205 (269)
T 2xmz_A 136 RAKVLDI-AGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRL---------SQSPHKMAKALRDYGTGQMPNLWPRLKE 205 (269)
T ss_dssp HHHHHHH-HCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHH---------TSCHHHHHHHHHHHSTTTSCCCGGGGGG
T ss_pred HHHhhcc-ccHHHHHHHHHhCccccccccCCHHHHHHHHHHHh---------ccCcHHHHHHHHHHHhccCccHHHHHHh
Confidence 0000000 0000011110000 00 00000 0100000 0011111111111 122233445666
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++ +|+++|+|++|..+++...+ +.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 206 i~--~P~lii~G~~D~~~~~~~~~-~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 265 (269)
T 2xmz_A 206 IK--VPTLILAGEYDEKFVQIAKK-MANLIPN--------SKCKLISATGHTIHVEDSDEFDTMILGFLKE 265 (269)
T ss_dssp CC--SCEEEEEETTCHHHHHHHHH-HHHHSTT--------EEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred cC--CCEEEEEeCCCcccCHHHHH-HHhhCCC--------cEEEEeCCCCCChhhcCHHHHHHHHHHHHHH
Confidence 65 89999999999988776543 5555554 9999999999999999999999999999964
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=249.12 Aligned_cols=261 Identities=16% Similarity=0.272 Sum_probs=170.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|..+|+.. ++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+... ..++
T Consensus 13 ~~g~~l~~~~~g~~~---~~~~vvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~~-~~~~ 79 (285)
T 3bwx_A 13 SDGLRLHFRAYEGDI---SRPPVLCLPGLTRNARDFEDLATRLA---------GDWRVLCPEMRGRGDSDYAKDP-MTYQ 79 (285)
T ss_dssp TTSCEEEEEEECBCT---TSCCEEEECCTTCCGGGGHHHHHHHB---------BTBCEEEECCTTBTTSCCCSSG-GGCS
T ss_pred CCCceEEEEEcCCCC---CCCcEEEECCCCcchhhHHHHHHHhh---------cCCEEEeecCCCCCCCCCCCCc-cccC
Confidence 467899999998742 27899999999999999999999988 7899999999999999875311 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++.+... ..........
T Consensus 80 ~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~-----~~~~~~~~~~ 145 (285)
T 3bwx_A 80 PMQYLQDLEALLAQEGIE-RFVAIGTSLGGLLTMLLAAANPA--------RIAAAVLNDVGPEVS-----PEGLERIRGY 145 (285)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSSCC-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-ceEEEEeCHHHHHHHHHHHhCch--------heeEEEEecCCcccC-----cchhHHHHHH
Confidence 999999999999999999 99999999999999999999999 999999998643221 1111111111
Q ss_pred hhcCCCCCCcHHHHHH---HHHhhccc----hhHHHHHhhcccCCCcc-cccccChhHHHHhhhc----ccCCccccccc
Q 020518 185 LQSLPSSIPSRKWLVN---HMMELGFS----KSLSEWIGTNLKKSGER-ETWAFNLDGAVQMFNS----YREMSYWPLLE 252 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 252 (325)
+.. ............ ......+. .....+........... .....+... ...+.. ....+.+..+.
T Consensus 146 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T 3bwx_A 146 VGQ-GRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKI-AEPFEAPVGATPQVDMWPLFD 223 (285)
T ss_dssp TTC-CCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGG-GCCTTSCTTCCCSSCCHHHHH
T ss_pred hcC-CcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHH-HHHHhhhhhccccchhhHHHH
Confidence 110 000111111111 11101110 01111111111100000 000111100 000000 01112222222
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+ .++|+++|+|++|..++++..+.+.+. ++ +++++++++||++++|+|+.+ +.|.+||+++
T Consensus 224 ~~-~~~P~lii~G~~D~~~~~~~~~~~~~~-~~--------~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~~ 285 (285)
T 3bwx_A 224 AL-ATRPLLVLRGETSDILSAQTAAKMASR-PG--------VELVTLPRIGHAPTLDEPESI-AAIGRLLERV 285 (285)
T ss_dssp HH-TTSCEEEEEETTCSSSCHHHHHHHHTS-TT--------EEEEEETTCCSCCCSCSHHHH-HHHHHHHTTC
T ss_pred Hc-cCCCeEEEEeCCCCccCHHHHHHHHhC-CC--------cEEEEeCCCCccchhhCchHH-HHHHHHHHhC
Confidence 22 138999999999999999887777666 54 999999999999999999988 5799999864
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=251.42 Aligned_cols=252 Identities=13% Similarity=0.126 Sum_probs=167.3
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCCCHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPHDIAN 107 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 107 (325)
.++|...|.+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+... ...+++++
T Consensus 10 ~~~~~~~G~g-----~~~vvllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 75 (271)
T 1wom_A 10 RNHVKVKGSG-----KASIMFAPGFGCDQSVWNAVAPAFE---------EDHRVILFDYVGSGHSDLRAYDLNRYQTLDG 75 (271)
T ss_dssp HTTCEEEECC-----SSEEEEECCTTCCGGGGTTTGGGGT---------TTSEEEECCCSCCSSSCCTTCCTTGGGSHHH
T ss_pred hceeEeecCC-----CCcEEEEcCCCCchhhHHHHHHHHH---------hcCeEEEECCCCCCCCCCCcccccccccHHH
Confidence 3456677753 5799999999999999999988887 6799999999999999865310 12468999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC------CchhHHHHH
Q 020518 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE------NSEGEVEKV 181 (325)
Q Consensus 108 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~------~~~~~~~~~ 181 (325)
+++|+.+++++++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++.+...... .........
T Consensus 76 ~a~dl~~~l~~l~~~-~~~lvGhS~GG~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (271)
T 1wom_A 76 YAQDVLDVCEALDLK-ETVFVGHSVGALIGMLASIRRPE--------LFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGL 146 (271)
T ss_dssp HHHHHHHHHHHTTCS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSCCBEETTTEECSBCHHHHHHH
T ss_pred HHHHHHHHHHHcCCC-CeEEEEeCHHHHHHHHHHHhCHH--------hhcceEEEcCCCcCCCCCchhccCCCHHHHHHH
Confidence 999999999999999 99999999999999999999999 999999999864322111 001111111
Q ss_pred HHHhhcCCCCCCcH-HHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 182 LQTLQSLPSSIPSR-KWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 182 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
...+.... ... .................+.+..... .................+....+..++ +|+
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~ 213 (271)
T 1wom_A 147 LEMMEKNY---IGWATVFAATVLNQPDRPEIKEELESRFC--------STDPVIARQFAKAAFFSDHREDLSKVT--VPS 213 (271)
T ss_dssp HHHHHHCH---HHHHHHHHHHHHCCTTCHHHHHHHHHHHH--------HSCHHHHHHHHHHHHSCCCHHHHTTCC--SCE
T ss_pred HHHHhhhH---HHHHHHHHHHHhcCCCchHHHHHHHHHHh--------cCCcHHHHHHHHHHhCcchHHhccccC--CCE
Confidence 11110000 000 0000000000000111111110000 001111111111111223344555555 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 214 lvi~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 269 (271)
T 1wom_A 214 LILQCADDIIAPATVGKYMHQHLPY--------SSLKQMEARGHCPHMSHPDETIQLIGDYLKA 269 (271)
T ss_dssp EEEEEETCSSSCHHHHHHHHHHSSS--------EEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcCCHHHHHHHHHHCCC--------CEEEEeCCCCcCccccCHHHHHHHHHHHHHh
Confidence 9999999999999888878777765 9999999999999999999999999999964
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-36 Score=248.07 Aligned_cols=252 Identities=18% Similarity=0.210 Sum_probs=168.3
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC--CCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE--IEGLDP 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~--~~~~~~ 101 (325)
.+|.+++|..+|+. ++|+|||+||++++...|.. +++.|++ .||+|+++|+||||.|+. +.. .
T Consensus 8 ~~g~~l~y~~~G~~----~~~~vvllHG~~~~~~~w~~~~~~~L~~--------~G~~vi~~D~rG~G~S~~~~~~~--~ 73 (298)
T 1q0r_A 8 SGDVELWSDDFGDP----ADPALLLVMGGNLSALGWPDEFARRLAD--------GGLHVIRYDHRDTGRSTTRDFAA--H 73 (298)
T ss_dssp ETTEEEEEEEESCT----TSCEEEEECCTTCCGGGSCHHHHHHHHT--------TTCEEEEECCTTSTTSCCCCTTT--S
T ss_pred cCCeEEEEEeccCC----CCCeEEEEcCCCCCccchHHHHHHHHHh--------CCCEEEeeCCCCCCCCCCCCCCc--C
Confidence 36789999998852 46899999999999999987 4588886 679999999999999987 322 4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC-CCCC----------
Q 020518 102 PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP-GKVK---------- 170 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~-~~~~---------- 170 (325)
.++++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++.+ ....
T Consensus 74 ~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~ 144 (298)
T 1q0r_A 74 PYGFGELAADAVAVLDGWGVD-RAHVVGLSMGATITQVIALDHHD--------RLSSLTMLLGGGLDIDFDANIERVMRG 144 (298)
T ss_dssp CCCHHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCTTCCHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHhCCC-ceEEEEeCcHHHHHHHHHHhCch--------hhheeEEecccCCCcccccchhhhhhh
Confidence 689999999999999999999 99999999999999999999999 999999999865 2100
Q ss_pred -------CCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHh-------hc--cch-hHHHHHhhcccCCCcccccccChh
Q 020518 171 -------TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMME-------LG--FSK-SLSEWIGTNLKKSGERETWAFNLD 233 (325)
Q Consensus 171 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (325)
.......+....... .+. ............ .. ... ....+.......... ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 213 (298)
T 1q0r_A 145 EPTLDGLPGPQQPFLDALALMN--QPA--EGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGG-------VL 213 (298)
T ss_dssp CCCSSCSCCCCHHHHHHHHHHH--SCC--CSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTT-------CC
T ss_pred hhhhcccccccHHHHHHHhccC--ccc--ccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCC-------cc
Confidence 000001111111100 000 111111111100 00 000 111111110000000 00
Q ss_pred HH-HHhhhcccCCccccc-ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh
Q 020518 234 GA-VQMFNSYREMSYWPL-LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311 (325)
Q Consensus 234 ~~-~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 311 (325)
.. ...+......+.... +.+++ +|+++|+|++|..++++..+.+.+.+++ +++++++++|| |.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~i~--~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--------~~~~~i~~~gH----e~p 279 (298)
T 1q0r_A 214 AEPYAHYSLTLPPPSRAAELREVT--VPTLVIQAEHDPIAPAPHGKHLAGLIPT--------ARLAEIPGMGH----ALP 279 (298)
T ss_dssp SCCCGGGGCCCCCGGGGGGGGGCC--SCEEEEEETTCSSSCTTHHHHHHHTSTT--------EEEEEETTCCS----SCC
T ss_pred chhhhhhhhhcCcccccccccccC--CCEEEEEeCCCccCCHHHHHHHHHhCCC--------CEEEEcCCCCC----CCc
Confidence 00 000001112233344 56665 8999999999999999888888777765 99999999999 889
Q ss_pred HHHHHHHHHHHhc
Q 020518 312 KGLLEIVAPRIAS 324 (325)
Q Consensus 312 ~~~~~~i~~fl~~ 324 (325)
+++++.|.+||.+
T Consensus 280 ~~~~~~i~~fl~~ 292 (298)
T 1q0r_A 280 SSVHGPLAEVILA 292 (298)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999964
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=245.73 Aligned_cols=255 Identities=15% Similarity=0.183 Sum_probs=170.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|. +++|||+||++++...|..+++.|++ +||+|+++|+||||.|..+. ..++
T Consensus 10 ~~g~~l~y~~~g~------~~pvvllHG~~~~~~~~~~~~~~L~~--------~g~~vi~~D~~G~G~S~~~~---~~~~ 72 (279)
T 1hkh_A 10 STPIELYYEDQGS------GQPVVLIHGYPLDGHSWERQTRELLA--------QGYRVITYDRRGFGGSSKVN---TGYD 72 (279)
T ss_dssp TEEEEEEEEEESS------SEEEEEECCTTCCGGGGHHHHHHHHH--------TTEEEEEECCTTSTTSCCCS---SCCS
T ss_pred CCCeEEEEEecCC------CCcEEEEcCCCchhhHHhhhHHHHHh--------CCcEEEEeCCCCCCCCCCCC---CCCC
Confidence 4678899998874 56799999999999999999999986 78999999999999998765 4789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC-CC-----chhHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT-EN-----SEGEV 178 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~-~~-----~~~~~ 178 (325)
++++++|+.+++++++.+ +++|+||||||.+++.+|.++|+ .+|+++|++++.+..... .. .....
T Consensus 73 ~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 144 (279)
T 1hkh_A 73 YDTFAADLHTVLETLDLR-DVVLVGFSMGTGELARYVARYGH-------ERVAKLAFLASLEPFLVQRDDNPEGVPQEVF 144 (279)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHHCS-------TTEEEEEEESCCCSBCBCBTTBTTSBCHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-ceEEEEeChhHHHHHHHHHHcCc-------cceeeEEEEccCCcccccCcCCcCCCcHHHH
Confidence 999999999999999999 99999999999999999999995 279999999975432110 00 00111
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhh------ccchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMEL------GFSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
......+..... .........+... ..... ...+...... .........+..+ ..+....+
T Consensus 145 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~l 212 (279)
T 1hkh_A 145 DGIEAAAKGDRF--AWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIG---------SAPVAAYAVVPAW-IEDFRSDV 212 (279)
T ss_dssp HHHHHHHHHCHH--HHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHT---------SCTTHHHHTHHHH-TCBCHHHH
T ss_pred HHHHHHhhhhhh--hhHHHHHhhhhhcccCCcccccHHHHHhhhhhhcc---------CcHHHHHHHHHHH-hhchhhhH
Confidence 111111100000 0000000000000 00000 0011110000 0011111111112 22333334
Q ss_pred cCC-CCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 252 EHP-PQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~-~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+ ..++|+++|+|++|..++++.. +.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 213 ~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 213 EAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE--------ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTT--------SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCC--------eeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 444 0038999999999999988765 777776665 8999999999999999999999999999964
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=258.44 Aligned_cols=263 Identities=17% Similarity=0.173 Sum_probs=167.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~ 104 (325)
+|.+++|...|+......+++|||+||++++...|..++..|.+. .+|+||++|+||||.|+..+.. ...++
T Consensus 36 ~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~-------~~~~Via~D~rG~G~S~~~~~~~~~~~~ 108 (330)
T 3nwo_A 36 GDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADE-------TGRTVIHYDQVGCGNSTHLPDAPADFWT 108 (330)
T ss_dssp TTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHH-------HTCCEEEECCTTSTTSCCCTTSCGGGCC
T ss_pred cCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccc-------cCcEEEEECCCCCCCCCCCCCCcccccc
Confidence 678999999987322122458999999999999999888888742 3899999999999999863221 13579
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++.+++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|.++|+++++.... ........
T Consensus 109 ~~~~a~dl~~ll~~lg~~-~~~lvGhSmGG~va~~~A~~~P~--------~v~~lvl~~~~~~~~-------~~~~~~~~ 172 (330)
T 3nwo_A 109 PQLFVDEFHAVCTALGIE-RYHVLGQSWGGMLGAEIAVRQPS--------GLVSLAICNSPASMR-------LWSEAAGD 172 (330)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHTCCT--------TEEEEEEESCCSBHH-------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC-ceEEEecCHHHHHHHHHHHhCCc--------cceEEEEecCCcchH-------HHHHHHHH
Confidence 999999999999999999 99999999999999999999999 999999998754211 00000000
Q ss_pred hhc-CCCCCCcHHHHHHHHHhhc-cc----hhHHHHHhhcccCCCc-ccccc-------cChhHHHHh--------hhcc
Q 020518 185 LQS-LPSSIPSRKWLVNHMMELG-FS----KSLSEWIGTNLKKSGE-RETWA-------FNLDGAVQM--------FNSY 242 (325)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~--------~~~~ 242 (325)
+.. .... ............. .. .....+.......... ..... .....+..+ ....
T Consensus 173 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 3nwo_A 173 LRAQLPAE--TRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTL 250 (330)
T ss_dssp HHHHSCHH--HHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGG
T ss_pred HHHhcCHH--HHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccc
Confidence 000 0000 0000000000000 00 0011111111100000 00000 000000000 0011
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
...+....+.+++ +|+|+|+|++|..++ ...+.+.+.+++ ++++++++|||++++|+|++|++.|.+||
T Consensus 251 ~~~~~~~~l~~i~--~P~Lvi~G~~D~~~p-~~~~~~~~~ip~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~FL 319 (330)
T 3nwo_A 251 GDWSVIDRLPDVT--APVLVIAGEHDEATP-KTWQPFVDHIPD--------VRSHVFPGTSHCTHLEKPEEFRAVVAQFL 319 (330)
T ss_dssp GGCBCGGGGGGCC--SCEEEEEETTCSSCH-HHHHHHHHHCSS--------EEEEEETTCCTTHHHHSHHHHHHHHHHHH
T ss_pred cCCchhhhcccCC--CCeEEEeeCCCccCh-HHHHHHHHhCCC--------CcEEEeCCCCCchhhcCHHHHHHHHHHHH
Confidence 1223344555555 899999999998764 455666666555 99999999999999999999999999999
Q ss_pred hc
Q 020518 323 AS 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 320 ~~ 321 (330)
T 3nwo_A 320 HQ 321 (330)
T ss_dssp HH
T ss_pred Hh
Confidence 74
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=245.10 Aligned_cols=251 Identities=14% Similarity=0.131 Sum_probs=169.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|++ ++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+. ..+++
T Consensus 7 ~g~~l~~~~~g~~----~~~~vv~lHG~~~~~~~~~~~~~~L~---------~~~~v~~~D~~G~G~S~~~~---~~~~~ 70 (264)
T 3ibt_A 7 NGTLMTYSESGDP----HAPTLFLLSGWCQDHRLFKNLAPLLA---------RDFHVICPDWRGHDAKQTDS---GDFDS 70 (264)
T ss_dssp TTEECCEEEESCS----SSCEEEEECCTTCCGGGGTTHHHHHT---------TTSEEEEECCTTCSTTCCCC---SCCCH
T ss_pred CCeEEEEEEeCCC----CCCeEEEEcCCCCcHhHHHHHHHHHH---------hcCcEEEEccccCCCCCCCc---cccCH
Confidence 6789999998873 47899999999999999999999997 67999999999999999874 68999
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
+++++|+.+++++++.+ +++++||||||.+++.+|.++ |+ +|+++|++++.+ .. .......
T Consensus 71 ~~~~~~~~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~p~--------~v~~lvl~~~~~-~~-----~~~~~~~--- 132 (264)
T 3ibt_A 71 QTLAQDLLAFIDAKGIR-DFQMVSTSHGCWVNIDVCEQLGAA--------RLPKTIIIDWLL-QP-----HPGFWQQ--- 132 (264)
T ss_dssp HHHHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHSCTT--------TSCEEEEESCCS-SC-----CHHHHHH---
T ss_pred HHHHHHHHHHHHhcCCC-ceEEEecchhHHHHHHHHHhhChh--------hhheEEEecCCC-Cc-----Chhhcch---
Confidence 99999999999999999 999999999999999999999 99 999999999876 11 1111111
Q ss_pred hhcCCCCCCcHHHH----HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 185 LQSLPSSIPSRKWL----VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 185 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
+....... ..... ...+..........+.+........ ...+............. ..+....+..++ +|+
T Consensus 133 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~--~P~ 206 (264)
T 3ibt_A 133 LAEGQHPT-EYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFH-GEMWQRACREIEANYRT--WGSPLDRMDSLP--QKP 206 (264)
T ss_dssp HHHTTCTT-THHHHHHHHHHHHHTTCCCHHHHHHHHHTGGGSC-HHHHHHHHHHHHHHHHH--HSSHHHHHHTCS--SCC
T ss_pred hhcccChh-hHHHHHHHHHHHhcccCCcHHHHHHHHHhhhhcc-chhHHHHHHHhccchhh--ccchhhcccccC--CCe
Confidence 21111111 11111 1111111222222222222221111 00011001111111100 011224455555 899
Q ss_pred EEEeeC--CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAE--KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|. .|...++...+.+.+..++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 207 lii~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 207 EICHIYSQPLSQDYRQLQLEFAAGHSW--------FHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp EEEEEECCSCCHHHHHHHHHHHHHCTT--------EEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred EEEEecCCccchhhHHHHHHHHHhCCC--------ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 999764 3333345555666665554 9999999999999999999999999999863
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=241.63 Aligned_cols=254 Identities=17% Similarity=0.232 Sum_probs=168.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|.+++|...|+. ..|+|||+||++ ++...|..+++.|+ ++|+|+++|+||||.|..+.. ..
T Consensus 15 ~g~~l~y~~~g~~----g~p~vvllHG~~~~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~~~--~~ 79 (285)
T 1c4x_A 15 GTLASHALVAGDP----QSPAVVLLHGAGPGAHAASNWRPIIPDLA---------ENFFVVAPDLIGFGQSEYPET--YP 79 (285)
T ss_dssp TTSCEEEEEESCT----TSCEEEEECCCSTTCCHHHHHGGGHHHHH---------TTSEEEEECCTTSTTSCCCSS--CC
T ss_pred CCEEEEEEecCCC----CCCEEEEEeCCCCCCcchhhHHHHHHHHh---------hCcEEEEecCCCCCCCCCCCC--cc
Confidence 5789999998742 134499999997 66678888888888 569999999999999987653 36
Q ss_pred CCHHHH----HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 103 HDIANA----ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 103 ~~~~~~----~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
++++++ ++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++....... .. ...
T Consensus 80 ~~~~~~~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~-~~-~~~ 148 (285)
T 1c4x_A 80 GHIMSWVGMRVEQILGLMNHFGIE-KSHIVGNSMGGAVTLQLVVEAPE--------RFDKVALMGSVGAPMNA-RP-PEL 148 (285)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSSCCSS-CC-HHH
T ss_pred cchhhhhhhHHHHHHHHHHHhCCC-ccEEEEEChHHHHHHHHHHhChH--------HhheEEEeccCCCCCCc-cc-hhH
Confidence 899999 99999999999998 99999999999999999999999 99999999986532211 11 111
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchh----HHHHHhhcccCCCcccccccChhHHHHhh---hccc--CCcccc
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKS----LSEWIGTNLKKSGERETWAFNLDGAVQMF---NSYR--EMSYWP 249 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~ 249 (325)
......+. .+........+........ ................ ........+ ..+. ......
T Consensus 149 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 219 (285)
T 1c4x_A 149 ARLLAFYA-----DPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPE----VRRIQEVMFESMKAGMESLVIPPA 219 (285)
T ss_dssp HHHHTGGG-----SCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHH----HHHHHHHHHHHHSSCCGGGCCCHH
T ss_pred HHHHHHhc-----cccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHH----HHHHHHHHhccccccccccccchh
Confidence 11111110 0111111111100000000 0000000000000000 000011111 0000 011223
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 220 ~l~~i~--~P~lii~G~~D~~~p~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 220 TLGRLP--HDVLVFHGRQDRIVPLDTSLYLTKHLKH--------AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HHTTCC--SCEEEEEETTCSSSCTHHHHHHHHHCSS--------EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred hhccCC--CCEEEEEeCCCeeeCHHHHHHHHHhCCC--------ceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 445554 8999999999999999888877777665 9999999999999999999999999999975
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=241.59 Aligned_cols=240 Identities=13% Similarity=0.071 Sum_probs=157.4
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG- 120 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~- 120 (325)
.++++|||+||++++...|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++++|+.+++++++
T Consensus 8 ~~g~~vvllHG~~~~~~~w~~~~~~L~~--------~g~~via~Dl~G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l~~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIWYKLKPLLES--------AGHKVTAVDLSAAGINPRRLD--EIHTFRDYSEPLMEVMASIPP 77 (264)
T ss_dssp -CCCEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEEECCTTSTTCSCCGG--GCCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCeEEEECCCccccchHHHHHHHHHh--------CCCEEEEeecCCCCCCCCCcc--cccCHHHHHHHHHHHHHHhCC
Confidence 4688999999999999999999999976 789999999999999986543 46899999999999999996
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc--CCCC-------
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS--LPSS------- 191 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------- 191 (325)
.+ +++||||||||.+++.+|.++|+ +|+++|++++......... ............. ....
T Consensus 78 ~~-~~~lvGhSmGG~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 2wfl_A 78 DE-KVVLLGHSFGGMSLGLAMETYPE--------KISVAVFMSAMMPDPNHSL-TYPFEKYNEKCPADMMLDSQFSTYGN 147 (264)
T ss_dssp TC-CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESSCCCCTTSCT-THHHHHHHHHSCTTTTTTCEEEEESC
T ss_pred CC-CeEEEEeChHHHHHHHHHHhChh--------hhceeEEEeeccCCCCcch-hhHHHHhhhcCcchhhhhhhhhhccC
Confidence 57 99999999999999999999999 9999999997532211111 1111111111100 0000
Q ss_pred --CC-----cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEe
Q 020518 192 --IP-----SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 192 --~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
.. ....................+...... . .. ..... +... ..... ... .++|+++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~------~~~~~-~~~~--~~~~~--~~~-~~~P~l~i~ 212 (264)
T 2wfl_A 148 PENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTR-P--GS------LFFQD-LAKA--KKFST--ERY-GSVKRAYIF 212 (264)
T ss_dssp TTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCC-C--EE------CCHHH-HTTS--CCCCT--TTG-GGSCEEEEE
T ss_pred CCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccC-C--Cc------ccccc-cccc--cccCh--HHh-CCCCeEEEE
Confidence 00 000000000000000000000000000 0 00 00000 0000 00000 011 137999999
Q ss_pred eCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 265 AEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 265 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|++|..++++..+.+.+.+++ ++++++++|||++++|+|++|++.|.+|+++
T Consensus 213 G~~D~~~~~~~~~~~~~~~p~--------~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 213 CNEDKSFPVEFQKWFVESVGA--------DKVKEIKEADHMGMLSQPREVCKCLLDISDS 264 (264)
T ss_dssp ETTCSSSCHHHHHHHHHHHCC--------SEEEEETTCCSCHHHHSHHHHHHHHHHHHC-
T ss_pred eCCcCCCCHHHHHHHHHhCCC--------ceEEEeCCCCCchhhcCHHHHHHHHHHHhhC
Confidence 999999999888888887776 8999999999999999999999999999863
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=238.39 Aligned_cols=238 Identities=12% Similarity=0.074 Sum_probs=157.4
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG-WD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~ 122 (325)
+++|||+||++.+...|..+++.|.+ .||+|+++|+||||.|..+.. ..++++++++|+.+++++++ .+
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~--------~g~~via~Dl~G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l~~~~ 72 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEA--------LGHKVTALDLAASGVDPRQIE--EIGSFDEYSEPLLTFLEALPPGE 72 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEEECCTTSTTCSCCGG--GCCSHHHHTHHHHHHHHTSCTTC
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHh--------CCCEEEEeCCCCCCCCCCCcc--cccCHHHHHHHHHHHHHhccccC
Confidence 67899999999999999999999986 789999999999999986543 46899999999999999996 57
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCC----------
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSI---------- 192 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 192 (325)
+++||||||||.+++.+|.++|+ +|+++|++++......... ..................
T Consensus 73 -~~~lvGhSmGG~va~~~a~~~p~--------~v~~lVl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T 3c6x_A 73 -KVILVGESCGGLNIAIAADKYCE--------KIAAAVFHNSVLPDTEHCP-SYVVDKLMEVFPDWKDTTYFTYTKDGKE 142 (257)
T ss_dssp -CEEEEEEETHHHHHHHHHHHHGG--------GEEEEEEEEECCCCSSSCT-THHHHHHHHHSCCCTTCEEEEEEETTEE
T ss_pred -CeEEEEECcchHHHHHHHHhCch--------hhheEEEEecccCCCCCcc-hhHHHHHhhcCcchhhhhhhhccCCCCc
Confidence 99999999999999999999999 9999999998632221111 111111111110000000
Q ss_pred ----CcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCC
Q 020518 193 ----PSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 193 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
............................ ... . .... +.... ... .... ..+|+++|+|++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~-~~~~-~~~~~--~~~--~~~~-~~~P~l~i~G~~D 207 (257)
T 3c6x_A 143 ITGLKLGFTLLRENLYTLCGPEEYELAKMLTR-KGS-------L-FQNI-LAKRP--FFT--KEGY-GSIKKIYVWTDQD 207 (257)
T ss_dssp EEEEECCHHHHHHHTSTTSCHHHHHHHHHHCC-CBC-------C-CHHH-HHHSC--CCC--TTTG-GGSCEEEEECTTC
T ss_pred cccccccHHHHHHHHhcCCCHHHHHHHHHhcC-CCc-------c-chhh-hcccc--ccC--hhhc-CcccEEEEEeCCC
Confidence 0000000000000000000000000000 000 0 0000 00000 000 0111 1479999999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++++..+.+.+.+++ ++++++++|||++++|+|++|++.|.+|++.
T Consensus 208 ~~~p~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 208 EIFLPEFQLWQIENYKP--------DKVYKVEGGDHKLQLTKTKEIAEILQEVADT 255 (257)
T ss_dssp SSSCHHHHHHHHHHSCC--------SEEEECCSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHCCC--------CeEEEeCCCCCCcccCCHHHHHHHHHHHHHh
Confidence 99999888888777765 8999999999999999999999999999975
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=247.60 Aligned_cols=245 Identities=17% Similarity=0.211 Sum_probs=159.0
Q ss_pred cceEEEEcccCCCCCCCc-eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 28 QTLAYEEVRSSSDRPYTS-TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~-~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
.+++|...|. ++ +|||+||+++++..|..+++.|. ++|+|+++|+||||.|..+ ..++++
T Consensus 2 ~~l~~~~~G~------g~~~vvllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~----~~~~~~ 62 (258)
T 1m33_A 2 NNIWWQTKGQ------GNVHLVLLHGWGLNAEVWRCIDEELS---------SHFTLHLVDLPGFGRSRGF----GALSLA 62 (258)
T ss_dssp -CCCEEEECC------CSSEEEEECCTTCCGGGGGGTHHHHH---------TTSEEEEECCTTSTTCCSC----CCCCHH
T ss_pred cceEEEEecC------CCCeEEEECCCCCChHHHHHHHHHhh---------cCcEEEEeeCCCCCCCCCC----CCcCHH
Confidence 3678888875 45 89999999999999999999988 7899999999999999876 368899
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch----hHHHHHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE----GEVEKVL 182 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~----~~~~~~~ 182 (325)
++++++.+. ++ + +++|+||||||.+|+.+|.++|+ +|+++|++++.+......... .....+.
T Consensus 63 ~~~~~l~~~---l~-~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
T 1m33_A 63 DMAEAVLQQ---AP-D-KAIWLGWSLGGLVASQIALTHPE--------RVRALVTVASSPCFSARDEWPGIKPDVLAGFQ 129 (258)
T ss_dssp HHHHHHHTT---SC-S-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSCCBCBTTBCSBCHHHHHHHH
T ss_pred HHHHHHHHH---hC-C-CeEEEEECHHHHHHHHHHHHhhH--------hhceEEEECCCCCccccccccCCCHHHHHHHH
Confidence 988776554 44 6 99999999999999999999999 999999999865432211110 0111111
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhh-ccc----hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMEL-GFS----KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
..+.. ........+... ... ......+........ ..........+..+...+....+.+++
T Consensus 130 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~-- 196 (258)
T 1m33_A 130 QQLSD------DQQRTVERFLALQTMGTETARQDARALKKTVLALP-----MPEVDVLNGGLEILKTVDLRQPLQNVS-- 196 (258)
T ss_dssp HHHHH------HHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSC-----CCCHHHHHHHHHHHHHCCCTTGGGGCC--
T ss_pred HHHhc------cHHHHHHHHHHHHhcCCccchhhHHHHHHHHHhcc-----CCcHHHHHHHHHHHHhCCHHHHHhhCC--
Confidence 11000 000000111100 000 000000100000000 000111111111122223344555555
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||+++
T Consensus 197 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 197 MPFLRLYGYLDGLVPRKVVPMLDKLWPH--------SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp SCEEEEEETTCSSSCGGGCC-CTTTCTT--------CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred CCEEEEeecCCCCCCHHHHHHHHHhCcc--------ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 8999999999999998766655555444 89999999999999999999999999999763
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=238.80 Aligned_cols=239 Identities=10% Similarity=0.057 Sum_probs=158.1
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG-W 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~-~ 121 (325)
++++|||+||++++...|..+++.|++ .||+|+++|+||||.|+.+.. ..++++++++|+.+++++++ .
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~--------~g~rVia~Dl~G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l~~~ 72 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEA--------AGHKVTALDLAASGTDLRKIE--ELRTLYDYTLPLMELMESLSAD 72 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEECCCTTSTTCCCCGG--GCCSHHHHHHHHHHHHHTSCSS
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHh--------CCCEEEEecCCCCCCCccCcc--cccCHHHHHHHHHHHHHHhccC
Confidence 468999999999999999999999986 789999999999999987543 46899999999999999997 5
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc--CCC---------
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS--LPS--------- 190 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------- 190 (325)
+ +++||||||||++++.+|.++|+ +|+++|++++......... ..........+.. ...
T Consensus 73 ~-~~~lvGhSmGG~va~~~a~~~P~--------~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (273)
T 1xkl_A 73 E-KVILVGHSLGGMNLGLAMEKYPQ--------KIYAAVFLAAFMPDSVHNS-SFVLEQYNERTPAENWLDTQFLPYGSP 142 (273)
T ss_dssp S-CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESCCCCCSSSCT-THHHHHHHHTSCTTTTTTCEEEECSCT
T ss_pred C-CEEEEecCHHHHHHHHHHHhChH--------hheEEEEEeccCCCCCCcH-HHHHHHhhccCChhhHHHHHHhhccCC
Confidence 7 99999999999999999999999 9999999997532211111 1111111111100 000
Q ss_pred -CCC----cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 191 -SIP----SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 191 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
... ....................+...... ... . .. .. +.... .... .. ..++|+++|+|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~---~~---~~-~~~~~--~~~~--~~-~~~~P~l~i~G 207 (273)
T 1xkl_A 143 EEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVR-PSS--L---FM---ED-LSKAK--YFTD--ER-FGSVKRVYIVC 207 (273)
T ss_dssp TSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCC-CBC--C---CH---HH-HHHCC--CCCT--TT-GGGSCEEEEEE
T ss_pred CCCccccccCHHHHHHHhhccCCHHHHHHHHHhcC-CCc--h---hh---hh-hhccc--ccch--hh-hCCCCeEEEEe
Confidence 000 000010000000000000000000000 000 0 00 00 00000 0000 00 02479999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|..++++..+.+.+.+++ ++++++++|||++++|+|++|++.|.+|++.
T Consensus 208 ~~D~~~p~~~~~~~~~~~p~--------~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~ 258 (273)
T 1xkl_A 208 TEDKGIPEEFQRWQIDNIGV--------TEAIEIKGADHMAMLCEPQKLCASLLEIAHK 258 (273)
T ss_dssp TTCTTTTHHHHHHHHHHHCC--------SEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCccCCCHHHHHHHHHhCCC--------CeEEEeCCCCCCchhcCHHHHHHHHHHHHHH
Confidence 99999999888888887776 8999999999999999999999999999975
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-35 Score=240.80 Aligned_cols=244 Identities=16% Similarity=0.234 Sum_probs=165.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|.+++|...|. +++|||+||++ ++...|..+++.|. ++|+|+++|+||||.|. +.. ..
T Consensus 24 ~g~~l~y~~~g~------g~~vvllHG~~~~~~~~~~~~~~~~~L~---------~~~~vi~~Dl~G~G~S~-~~~--~~ 85 (296)
T 1j1i_A 24 GGVETRYLEAGK------GQPVILIHGGGAGAESEGNWRNVIPILA---------RHYRVIAMDMLGFGKTA-KPD--IE 85 (296)
T ss_dssp TTEEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHT---------TTSEEEEECCTTSTTSC-CCS--SC
T ss_pred CCEEEEEEecCC------CCeEEEECCCCCCcchHHHHHHHHHHHh---------hcCEEEEECCCCCCCCC-CCC--CC
Confidence 678999998874 57899999998 66677888888887 56999999999999998 543 47
Q ss_pred CCHHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 103 HDIANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
++++++++|+.++++++++ + +++|+||||||.+|+.+|.++|+ +|+++|++++......... ....
T Consensus 86 ~~~~~~~~dl~~~l~~l~~~~-~~~lvGhS~Gg~ia~~~A~~~p~--------~v~~lvl~~~~~~~~~~~~---~~~~- 152 (296)
T 1j1i_A 86 YTQDRRIRHLHDFIKAMNFDG-KVSIVGNSMGGATGLGVSVLHSE--------LVNALVLMGSAGLVVEIHE---DLRP- 152 (296)
T ss_dssp CCHHHHHHHHHHHHHHSCCSS-CEEEEEEHHHHHHHHHHHHHCGG--------GEEEEEEESCCBCCCC-----------
T ss_pred CCHHHHHHHHHHHHHhcCCCC-CeEEEEEChhHHHHHHHHHhChH--------hhhEEEEECCCCCCCCCCc---hHHH-
Confidence 8999999999999999998 7 99999999999999999999999 9999999998643211100 0000
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhc-----cchhH-HHHHhhcccCCCcccccccChhHHHHhhhcc----cCCcccccc
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELG-----FSKSL-SEWIGTNLKKSGERETWAFNLDGAVQMFNSY----REMSYWPLL 251 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 251 (325)
+... ..........+.... ..... ......... . . ....+...+... ........+
T Consensus 153 ---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~----~~~~~~~~~~~~~~~~~~~~~~~~l 218 (296)
T 1j1i_A 153 ---IINY---DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATD-E---A----TRKAYVATMQWIREQGGLFYDPEFI 218 (296)
T ss_dssp ------C---CSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHS-H---H----HHHHHHHHHHHHHHHTSSBCCHHHH
T ss_pred ---Hhcc---cCCchHHHHHHHHhccCcccccHHHHHHHHHHhhC-c---c----hhhHHHHHHHHHHhcccccccHHHh
Confidence 0000 011111111000000 00000 000000000 0 0 000111111110 011122344
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 219 ~~i~--~P~Lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 281 (296)
T 1j1i_A 219 RKVQ--VPTLVVQGKDDKVVPVETAYKFLDLIDD--------SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 281 (296)
T ss_dssp TTCC--SCEEEEEETTCSSSCHHHHHHHHHHCTT--------EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred hcCC--CCEEEEEECCCcccCHHHHHHHHHHCCC--------CEEEEECCCCCCchhcCHHHHHHHHHHHHhc
Confidence 5554 8999999999999999888888777765 9999999999999999999999999999964
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=241.79 Aligned_cols=254 Identities=16% Similarity=0.191 Sum_probs=177.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++.+++|...|. +|+|||+||++++...|. .++..|.+ +||+|+++|+||||.|..+ ..++
T Consensus 31 ~~~~l~y~~~g~------~~~vv~lHG~~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~s~~~----~~~~ 92 (293)
T 3hss_A 31 RVINLAYDDNGT------GDPVVFIAGRGGAGRTWHPHQVPAFLA--------AGYRCITFDNRGIGATENA----EGFT 92 (293)
T ss_dssp CEEEEEEEEECS------SEEEEEECCTTCCGGGGTTTTHHHHHH--------TTEEEEEECCTTSGGGTTC----CSCC
T ss_pred ccceEEEEEcCC------CCEEEEECCCCCchhhcchhhhhhHhh--------cCCeEEEEccCCCCCCCCc----ccCC
Confidence 577899998874 789999999999999999 67888876 8999999999999999765 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++...... ...........
T Consensus 93 ~~~~~~~~~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~---~~~~~~~~~~~ 160 (293)
T 3hss_A 93 TQTMVADTAALIETLDIA-PARVVGVSMGAFIAQELMVVAPE--------LVSSAVLMATRGRLDR---ARQFFNKAEAE 160 (293)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSSCCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEeeCccHHHHHHHHHHChH--------HHHhhheecccccCCh---hhhHHHHHHHH
Confidence 999999999999999999 99999999999999999999999 9999999998753321 11111111111
Q ss_pred hhcCCCCCCcHHHHHHHHHhhcc------chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 185 LQSLPSSIPSRKWLVNHMMELGF------SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
+...................... ......+......... ................+....+..++ +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~i~--~ 232 (293)
T 3hss_A 161 LYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPI------KSTPGLRCQLDCAPQTNRLPAYRNIA--A 232 (293)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCC------CCCHHHHHHHTSSCSSCCHHHHTTCC--S
T ss_pred HHhhcccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccc------cccHHHHhHhhhccccchHHHHhhCC--C
Confidence 11111111111111111110000 0001111111000000 01122222223333444455566665 8
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
|+++|+|++|..++++..+.+.+.+++ +++++++++||++++++|+++++.|.+||+++
T Consensus 233 P~lii~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 233 PVLVIGFADDVVTPPYLGREVADALPN--------GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHSTT--------EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHHCCC--------ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 999999999999999888888877765 99999999999999999999999999999864
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=239.34 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=166.9
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHH-HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFS-RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~-~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+++|...|.+ .++|||+||++ ++...|..++ +.|. ++|+|+++|+||||.|..+.. ..+
T Consensus 25 ~~l~y~~~g~g-----~~~vvllHG~~~~~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~ 88 (289)
T 1u2e_A 25 LRIHFNDCGQG-----DETVVLLHGSGPGATGWANFSRNIDPLVE---------AGYRVILLDCPGWGKSDSVVN--SGS 88 (289)
T ss_dssp EEEEEEEECCC-----SSEEEEECCCSTTCCHHHHTTTTHHHHHH---------TTCEEEEECCTTSTTSCCCCC--SSC
T ss_pred EEEEEeccCCC-----CceEEEECCCCcccchhHHHHHhhhHHHh---------cCCeEEEEcCCCCCCCCCCCc--ccc
Confidence 78999998752 23899999998 5556777777 7777 569999999999999988653 368
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC--chhHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN--SEGEVEKV 181 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~~ 181 (325)
+++++++++.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++......... ........
T Consensus 89 ~~~~~~~~l~~~l~~l~~~-~~~lvGhS~GG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 159 (289)
T 1u2e_A 89 RSDLNARILKSVVDQLDIA-KIHLLGNSMGGHSSVAFTLKWPE--------RVGKLVLMGGGTGGMSLFTPMPTEGIKRL 159 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCSCCCCCSSSCSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCC-ceEEEEECHhHHHHHHHHHHCHH--------hhhEEEEECCCccccccccccchhhHHHH
Confidence 9999999999999999998 99999999999999999999999 9999999998653211110 11111111
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccc-----hhH-HHHHhhcccCCCcccccccChhHHHHhhhcc-----cCCccccc
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFS-----KSL-SEWIGTNLKKSGERETWAFNLDGAVQMFNSY-----REMSYWPL 250 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 250 (325)
...+.. +........+...... +.. ....... .............+ ...+....
T Consensus 160 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (289)
T 1u2e_A 160 NQLYRQ-----PTIENLKLMMDIFVFDTSDLTDALFEARLNNM----------LSRRDHLENFVKSLEANPKQFPDFGPR 224 (289)
T ss_dssp HHHHHS-----CCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHH----------HHTHHHHHHHHHHHHHCSCCSCCCGGG
T ss_pred HHHHhc-----chHHHHHHHHHHhhcCcccCCHHHHHHHHHHh----------hcChhHHHHHHHHHHhccccccchhhH
Confidence 111110 0111111111000000 000 0000000 00001111111100 11223344
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.+++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 225 l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 225 LAEIK--AQTLIVWGRNDRFVPMDAGLRLLSGIAG--------SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp GGGCC--SCEEEEEETTCSSSCTHHHHHHHHHSTT--------CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred HhhcC--CCeEEEeeCCCCccCHHHHHHHHhhCCC--------cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 55554 8999999999999999888888777765 8999999999999999999999999999975
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=239.07 Aligned_cols=255 Identities=15% Similarity=0.116 Sum_probs=175.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|...|. +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+... ..+++
T Consensus 11 ~~~~~~y~~~g~------~~~vv~~HG~~~~~~~~~~~~~~L~---------~~~~vi~~d~~G~G~s~~~~~~-~~~~~ 74 (278)
T 3oos_A 11 PRGKFEYFLKGE------GPPLCVTHLYSEYNDNGNTFANPFT---------DHYSVYLVNLKGCGNSDSAKND-SEYSM 74 (278)
T ss_dssp TTEEEEEEEECS------SSEEEECCSSEECCTTCCTTTGGGG---------GTSEEEEECCTTSTTSCCCSSG-GGGSH
T ss_pred CCceEEEEecCC------CCeEEEEcCCCcchHHHHHHHHHhh---------cCceEEEEcCCCCCCCCCCCCc-ccCcH
Confidence 567899999874 6799999999999999999888887 6899999999999999886421 46799
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC----------CCCCch
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV----------KTENSE 175 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~----------~~~~~~ 175 (325)
+++++|+.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++..... ......
T Consensus 75 ~~~~~~~~~~~~~l~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (278)
T 3oos_A 75 TETIKDLEAIREALYIN-KWGFAGHSAGGMLALVYATEAQE--------SLTKIIVGGAAASKEYASHKDSIYCSKNVKF 145 (278)
T ss_dssp HHHHHHHHHHHHHTTCS-CEEEEEETHHHHHHHHHHHHHGG--------GEEEEEEESCCSBGGGGGSTTSTTSTTSTTH
T ss_pred HHHHHHHHHHHHHhCCC-eEEEEeecccHHHHHHHHHhCch--------hhCeEEEecCccccccccccchhhhhhchhH
Confidence 99999999999999999 99999999999999999999999 999999999875411 001111
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHh-hccc-hhHHHHHhhcccCCCcccccccChhHHHHhh-hcccCCccccccc
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMME-LGFS-KSLSEWIGTNLKKSGERETWAFNLDGAVQMF-NSYREMSYWPLLE 252 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 252 (325)
.........+................... .... .....++.... .. .........+. ......+....+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (278)
T 3oos_A 146 NRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPN----SG---KTVGNRLNYFRQVEYKDYDVRQKLK 218 (278)
T ss_dssp HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCC----CC---EECHHHHHHHHHTTGGGCBCHHHHT
T ss_pred HHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccc----cc---hhHHHHHHHhhhcccccccHHHHHh
Confidence 12222222221111110011111111111 0111 11111111111 00 00011111111 1233334445566
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||
T Consensus 219 ~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 219 FVK--IPSFIYCGKHDVQCPYIFSCEIANLIPN--------ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp TCC--SCEEEEEETTCSSSCHHHHHHHHHHSTT--------EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred CCC--CCEEEEEeccCCCCCHHHHHHHHhhCCC--------cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 665 8999999999999999888888877765 99999999999999999999999999986
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=242.36 Aligned_cols=259 Identities=15% Similarity=0.152 Sum_probs=162.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|++ +.+++|||+||++++...|...+..+.+ .||+|+++|+||||.|+.+.. ..+++
T Consensus 13 ~g~~l~~~~~g~~---~~~~~vvllHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~--~~~~~ 79 (293)
T 1mtz_A 13 NGIYIYYKLCKAP---EEKAKLMTMHGGPGMSHDYLLSLRDMTK--------EGITVLFYDQFGCGRSEEPDQ--SKFTI 79 (293)
T ss_dssp TTEEEEEEEECCS---SCSEEEEEECCTTTCCSGGGGGGGGGGG--------GTEEEEEECCTTSTTSCCCCG--GGCSH
T ss_pred CCEEEEEEEECCC---CCCCeEEEEeCCCCcchhHHHHHHHHHh--------cCcEEEEecCCCCccCCCCCC--CcccH
Confidence 5788999998863 1238999999987766655544444443 689999999999999987642 35899
Q ss_pred HHHHHHHHHHHHHh-CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 106 ANAANDLANLVKAK-GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 106 ~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
+++++|+.++++++ +++ +++|+||||||.+|+.+|.++|+ +|+++|++++.+... ........
T Consensus 80 ~~~~~dl~~~~~~l~~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~-------~~~~~~~~ 143 (293)
T 1mtz_A 80 DYGVEEAEALRSKLFGNE-KVFLMGSSYGGALALAYAVKYQD--------HLKGLIVSGGLSSVP-------LTVKEMNR 143 (293)
T ss_dssp HHHHHHHHHHHHHHHTTC-CEEEEEETHHHHHHHHHHHHHGG--------GEEEEEEESCCSBHH-------HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEEecHHHHHHHHHHHhCch--------hhheEEecCCccChH-------HHHHHHHH
Confidence 99999999999999 998 99999999999999999999999 999999999764310 00000000
Q ss_pred hhcCCCCCCcHHHHHHHHHhhcc-ch----hHHHHHhhcccC-CCcccccccCh------hHHHHh--------hhcccC
Q 020518 185 LQSLPSSIPSRKWLVNHMMELGF-SK----SLSEWIGTNLKK-SGERETWAFNL------DGAVQM--------FNSYRE 244 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~--------~~~~~~ 244 (325)
+...... .....+......... .. ....+....... ........... ..+..+ ......
T Consensus 144 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (293)
T 1mtz_A 144 LIDELPA-KYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKD 222 (293)
T ss_dssp HHHTSCH-HHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTT
T ss_pred HHHhcCH-HHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccC
Confidence 0000000 000000000000000 00 000111110000 00000000000 000000 001112
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+....+..++ +|+++|+|++| .+++...+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 223 ~~~~~~l~~i~--~P~lii~G~~D-~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 223 WDITDKISAIK--IPTLITVGEYD-EVTPNVARVIHEKIAG--------SELHVFRDCSHLTMWEDREGYNKLLSDFILK 291 (293)
T ss_dssp CBCTTTGGGCC--SCEEEEEETTC-SSCHHHHHHHHHHSTT--------CEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CChhhhhccCC--CCEEEEeeCCC-CCCHHHHHHHHHhCCC--------ceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 22334445554 89999999999 6778777777776655 8999999999999999999999999999975
Q ss_pred C
Q 020518 325 V 325 (325)
Q Consensus 325 ~ 325 (325)
.
T Consensus 292 ~ 292 (293)
T 1mtz_A 292 H 292 (293)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=245.24 Aligned_cols=117 Identities=22% Similarity=0.256 Sum_probs=106.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC--CCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI--EGLDPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~--~~~~~~~ 103 (325)
+|.+++|...|. +|+|||+||++++...|..+++.|.+ .||+|+++|+||||.|+.+ .. ...+
T Consensus 19 ~g~~l~y~~~G~------g~~vvllHG~~~~~~~w~~~~~~L~~--------~g~~via~Dl~G~G~S~~~~~~~-~~~~ 83 (328)
T 2cjp_A 19 NGLNMHLAELGE------GPTILFIHGFPELWYSWRHQMVYLAE--------RGYRAVAPDLRGYGDTTGAPLND-PSKF 83 (328)
T ss_dssp TTEEEEEEEECS------SSEEEEECCTTCCGGGGHHHHHHHHT--------TTCEEEEECCTTSTTCBCCCTTC-GGGG
T ss_pred CCcEEEEEEcCC------CCEEEEECCCCCchHHHHHHHHHHHH--------CCcEEEEECCCCCCCCCCcCcCC-cccc
Confidence 678999999874 67999999999999999999999986 6899999999999999876 21 1468
Q ss_pred CHHHHHHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++++++|+.+++++++ ++ +++|+||||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 84 ~~~~~a~dl~~~l~~l~~~~~-~~~lvGhS~Gg~ia~~~A~~~p~--------~v~~lvl~~~~~ 139 (328)
T 2cjp_A 84 SILHLVGDVVALLEAIAPNEE-KVFVVAHDWGALIAWHLCLFRPD--------KVKALVNLSVHF 139 (328)
T ss_dssp SHHHHHHHHHHHHHHHCTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCC
T ss_pred cHHHHHHHHHHHHHHhcCCCC-CeEEEEECHHHHHHHHHHHhChh--------heeEEEEEccCC
Confidence 99999999999999999 89 99999999999999999999999 999999999653
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=240.20 Aligned_cols=257 Identities=15% Similarity=0.172 Sum_probs=174.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|++ ++|+|||+||++++...|..+++.|+ +||+|+++|+||||.|..+. ..+++
T Consensus 18 ~g~~l~~~~~g~~----~~~~vl~lHG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~~~---~~~~~ 81 (299)
T 3g9x_A 18 LGERMHYVDVGPR----DGTPVLFLHGNPTSSYLWRNIIPHVA---------PSHRCIAPDLIGMGKSDKPD---LDYFF 81 (299)
T ss_dssp TTEEEEEEEESCS----SSCCEEEECCTTCCGGGGTTTHHHHT---------TTSCEEEECCTTSTTSCCCC---CCCCH
T ss_pred CCeEEEEEecCCC----CCCEEEEECCCCccHHHHHHHHHHHc---------cCCEEEeeCCCCCCCCCCCC---CcccH
Confidence 6789999999863 57899999999999999999999886 78999999999999999876 47899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++|+.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++....................+
T Consensus 82 ~~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
T 3g9x_A 82 DDHVRYLDAFIEALGLE-EVVLVIHDWGSALGFHWAKRNPE--------RVKGIACMEFIRPFPTWDEWPEFARETFQAF 152 (299)
T ss_dssp HHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHHHHHHSGG--------GEEEEEEEEECCCBSSGGGSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-cEEEEEeCccHHHHHHHHHhcch--------heeEEEEecCCcchhhhhhcchHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999 9999999996544332211122222222222
Q ss_pred hcCCCC---CCcHHHHHHHHHhh----ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC-----------Ccc
Q 020518 186 QSLPSS---IPSRKWLVNHMMEL----GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE-----------MSY 247 (325)
Q Consensus 186 ~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 247 (325)
...... ..........+... .................. .............. .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 3g9x_A 153 RTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPV-------DREPLWRFPNELPIAGEPANIVALVEAY 225 (299)
T ss_dssp TSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGG-------GGHHHHHHHHHSCBTTBSHHHHHHHHHH
T ss_pred cCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhcccc-------ccchhhhhhhhhhhccccchhhhhhhhh
Confidence 110000 00000001111000 001110000010000000 00001111111000 011
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...+..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+|+.+
T Consensus 226 ~~~l~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 226 MNWLHQSP--VPKLLFWGTPGVLIPPAEAARLAESLPN--------CKTVDIGPGLHYLQEDNPDLIGSEIARWLPA 292 (299)
T ss_dssp HHHHHHCC--SCEEEEEEEECSSSCHHHHHHHHHHSTT--------EEEEEEEEESSCHHHHCHHHHHHHHHHHSGG
T ss_pred hhhcccCC--CCeEEEecCCCCCCCHHHHHHHHhhCCC--------CeEEEeCCCCCcchhcCHHHHHHHHHHHHhh
Confidence 22234444 8999999999999999988888887766 9999999999999999999999999999864
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=237.63 Aligned_cols=256 Identities=16% Similarity=0.183 Sum_probs=173.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|+ +|+|||+||++++...|..++..|.. +||+|+++|+||||.|..+. ..+++
T Consensus 17 ~g~~l~~~~~g~------~~~vv~~HG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~S~~~~---~~~~~ 79 (309)
T 3u1t_A 17 EGATIAYVDEGS------GQPVLFLHGNPTSSYLWRNIIPYVVA--------AGYRAVAPDLIGMGDSAKPD---IEYRL 79 (309)
T ss_dssp TTEEEEEEEEEC------SSEEEEECCTTCCGGGGTTTHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCCH
T ss_pred CCeEEEEEEcCC------CCEEEEECCCcchhhhHHHHHHHHHh--------CCCEEEEEccCCCCCCCCCC---cccCH
Confidence 678999999886 67999999999999999999998555 89999999999999999875 47899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCc----hhHHHHH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENS----EGEVEKV 181 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~----~~~~~~~ 181 (325)
+++++++.+++++++.+ +++|+||||||.+++.+|.++|+ +|+++|++++.......... .......
T Consensus 80 ~~~~~~~~~~~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 150 (309)
T 3u1t_A 80 QDHVAYMDGFIDALGLD-DMVLVIHDWGSVIGMRHARLNPD--------RVAAVAFMEALVPPALPMPSYEAMGPQLGPL 150 (309)
T ss_dssp HHHHHHHHHHHHHHTCC-SEEEEEEEHHHHHHHHHHHHCTT--------TEEEEEEEEESCTTTCSBSCSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-ceEEEEeCcHHHHHHHHHHhChH--------hheEEEEeccCCCCccccccccccchhhhHH
Confidence 99999999999999998 99999999999999999999999 99999999987544311111 1111111
Q ss_pred HHHhhcCCC---CCCcHHHHHHHHHhh-----ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC---------
Q 020518 182 LQTLQSLPS---SIPSRKWLVNHMMEL-----GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE--------- 244 (325)
Q Consensus 182 ~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 244 (325)
...+..... ...........+... .................. ..............
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 223 (309)
T 3u1t_A 151 FRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQ-------SRLPTLQWPREVPIGGEPAFAEA 223 (309)
T ss_dssp HHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTG-------GGHHHHHHHHHSCBTTBSHHHHH
T ss_pred HHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCcc-------ccchHHHHHHHhccccccchhhh
Confidence 111111000 000000001111000 011111111111110000 00000111100000
Q ss_pred --CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 245 --MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 245 --~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.+....+.+++ +|+++|+|++|..++++..+.+.+.+++ .++++++++||++++++|+++++.|.+||
T Consensus 224 ~~~~~~~~l~~i~--~P~l~i~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 293 (309)
T 3u1t_A 224 EVLKNGEWLMASP--IPKLLFHAEPGALAPKPVVDYLSENVPN--------LEVRFVGAGTHFLQEDHPHLIGQGIADWL 293 (309)
T ss_dssp HHHHHHHHHHHCC--SCEEEEEEEECSSSCHHHHHHHHHHSTT--------EEEEEEEEESSCHHHHCHHHHHHHHHHHH
T ss_pred hhhhhhhhcccCC--CCEEEEecCCCCCCCHHHHHHHHhhCCC--------CEEEEecCCcccchhhCHHHHHHHHHHHH
Confidence 01122334444 8999999999999999888788777766 88999999999999999999999999999
Q ss_pred hc
Q 020518 323 AS 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 294 ~~ 295 (309)
T 3u1t_A 294 RR 295 (309)
T ss_dssp HH
T ss_pred Hh
Confidence 75
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=234.82 Aligned_cols=263 Identities=17% Similarity=0.257 Sum_probs=180.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|..++++ ++|+|||+||++++...|..++..|.+ .||+|+++|+||+|.|..+... ..++
T Consensus 11 ~~g~~l~~~~~g~~----~~~~vv~~hG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~G~G~s~~~~~~-~~~~ 77 (286)
T 3qit_A 11 FGGNQICLCSWGSP----EHPVVLCIHGILEQGLAWQEVALPLAA--------QGYRVVAPDLFGHGRSSHLEMV-TSYS 77 (286)
T ss_dssp ETTEEEEEEEESCT----TSCEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCSSG-GGCS
T ss_pred cCCceEEEeecCCC----CCCEEEEECCCCcccchHHHHHHHhhh--------cCeEEEEECCCCCCCCCCCCCC-CCcC
Confidence 36889999999863 578999999999999999999999997 7899999999999999886521 4789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC--CchhHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE--NSEGEVEKVL 182 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~~~~ 182 (325)
++++++++..++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++........ .....+....
T Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 148 (286)
T 3qit_A 78 SLTFLAQIDRVIQELPDQ-PLLLVGHSMGAMLATAIASVRPK--------KIKELILVELPLPAEESKKESAVNQLTTCL 148 (286)
T ss_dssp HHHHHHHHHHHHHHSCSS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCCCCC---CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC-CEEEEEeCHHHHHHHHHHHhChh--------hccEEEEecCCCCCccccchhhhHHHHHHH
Confidence 999999999999999998 99999999999999999999999 999999999875544222 2222233333
Q ss_pred HHhhcCCCC--CCcHHHHHHHHHh--hccchh-HHHHHhhcccCCCcccccccChhHHHHhhhcc-----cCCccccccc
Q 020518 183 QTLQSLPSS--IPSRKWLVNHMME--LGFSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSY-----REMSYWPLLE 252 (325)
Q Consensus 183 ~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 252 (325)
..+...... ............. ...... ...+.............+.............+ ...+....+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T 3qit_A 149 DYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLK 228 (286)
T ss_dssp HHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHH
T ss_pred HHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHh
Confidence 333322210 1222222211111 111222 22222222222222222222222111111111 1112223344
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHH
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 320 (325)
.++ +|+++|+|++|..++++..+.+.+..++ ++++++++ ||++++|+|+++++.|.+
T Consensus 229 ~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 229 SIQ--VPTTLVYGDSSKLNRPEDLQQQKMTMTQ--------AKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HCC--SCEEEEEETTCCSSCHHHHHHHHHHSTT--------SEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred ccC--CCeEEEEeCCCcccCHHHHHHHHHHCCC--------CeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 444 8999999999999999888888777765 89999999 999999999999998864
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=242.02 Aligned_cols=256 Identities=14% Similarity=0.233 Sum_probs=161.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|++ .+|+|||+||+++++..|..+++.|+ ++|+|+++|+||||.|+.+.. ..+++
T Consensus 29 ~g~~l~y~~~G~g----~~~~vvllHG~~~~~~~w~~~~~~L~---------~~~~via~Dl~GhG~S~~~~~--~~~~~ 93 (318)
T 2psd_A 29 LDSFINYYDSEKH----AENAVIFLHGNATSSYLWRHVVPHIE---------PVARCIIPDLIGMGKSGKSGN--GSYRL 93 (318)
T ss_dssp TTEEEEEEECCSC----TTSEEEEECCTTCCGGGGTTTGGGTT---------TTSEEEEECCTTSTTCCCCTT--SCCSH
T ss_pred CCeEEEEEEcCCC----CCCeEEEECCCCCcHHHHHHHHHHhh---------hcCeEEEEeCCCCCCCCCCCC--CccCH
Confidence 6788999998763 35699999999999999999988887 568999999999999987643 46899
Q ss_pred HHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC-CCCCchhHHHHHHH
Q 020518 106 ANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV-KTENSEGEVEKVLQ 183 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~-~~~~~~~~~~~~~~ 183 (325)
+++++|+.++++++++ + +++|+||||||.+|+.+|.++|+ +|+++|++++..... ......... ....
T Consensus 94 ~~~a~dl~~ll~~l~~~~-~~~lvGhSmGg~ia~~~A~~~P~--------~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~ 163 (318)
T 2psd_A 94 LDHYKYLTAWFELLNLPK-KIIFVGHDWGAALAFHYAYEHQD--------RIKAIVHMESVVDVIESWDEWPDIE-EDIA 163 (318)
T ss_dssp HHHHHHHHHHHTTSCCCS-SEEEEEEEHHHHHHHHHHHHCTT--------SEEEEEEEEECCSCBSCCTTSCSCH-HHHH
T ss_pred HHHHHHHHHHHHhcCCCC-CeEEEEEChhHHHHHHHHHhChH--------hhheEEEeccccCCccchhhhhhHH-HHHH
Confidence 9999999999999999 7 99999999999999999999999 999999998643221 000000000 1111
Q ss_pred HhhcCCC--CCCcHHHHHHHHHhh----ccch-hHHHHHhhcccCCCccc--c--c--cc-----ChhHHHHhhhcccCC
Q 020518 184 TLQSLPS--SIPSRKWLVNHMMEL----GFSK-SLSEWIGTNLKKSGERE--T--W--AF-----NLDGAVQMFNSYREM 245 (325)
Q Consensus 184 ~~~~~~~--~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~--~--~--~~-----~~~~~~~~~~~~~~~ 245 (325)
.+..... .......+...+... .... ....+.. ......... . + .. ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 237 (318)
T 2psd_A 164 LIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLE-PFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVR----- 237 (318)
T ss_dssp HHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHG-GGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHH-----
T ss_pred HHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHH-hhcCccccccchhcccccccccccccchhHHHHH-----
Confidence 1110000 000000000000000 0001 1111111 000000000 0 0 00 0000000000
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+....+..+ .++|+++|+|++| .+++ ..+.+.+.+++ ++++++ ++||++++|+|++|++.|.+||++
T Consensus 238 ~~~~~l~~i-~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~--------~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~ 304 (318)
T 2psd_A 238 NYNAYLRAS-DDLPKLFIESDPG-FFSN-AIVEGAKKFPN--------TEFVKV-KGLHFLQEDAPDEMGKYIKSFVER 304 (318)
T ss_dssp HHHHHHHTC-TTSCEEEEEEEEC-SSHH-HHHHHHTTSSS--------EEEEEE-EESSSGGGTCHHHHHHHHHHHHHH
T ss_pred HHHHHhccc-cCCCeEEEEeccc-cCcH-HHHHHHHhCCC--------cEEEEe-cCCCCCHhhCHHHHHHHHHHHHHH
Confidence 111223344 0389999999999 7776 66666655554 899889 679999999999999999999964
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=239.35 Aligned_cols=256 Identities=18% Similarity=0.214 Sum_probs=181.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|...|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+. ..+++
T Consensus 56 ~~~~~~~~~~g~------~p~vv~lhG~~~~~~~~~~~~~~L~---------~~~~v~~~D~~G~G~S~~~~---~~~~~ 117 (314)
T 3kxp_A 56 GRITLNVREKGS------GPLMLFFHGITSNSAVFEPLMIRLS---------DRFTTIAVDQRGHGLSDKPE---TGYEA 117 (314)
T ss_dssp SSCEEEEEEECC------SSEEEEECCTTCCGGGGHHHHHTTT---------TTSEEEEECCTTSTTSCCCS---SCCSH
T ss_pred CCEEEEEEecCC------CCEEEEECCCCCCHHHHHHHHHHHH---------cCCeEEEEeCCCcCCCCCCC---CCCCH
Confidence 577899988765 6899999999999999999888887 67999999999999998554 57899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++|+..++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+... ..........+
T Consensus 118 ~~~~~dl~~~l~~l~~~-~v~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~-----~~~~~~~~~~~ 183 (314)
T 3kxp_A 118 NDYADDIAGLIRTLARG-HAILVGHSLGARNSVTAAAKYPD--------LVRSVVAIDFTPYIE-----TEALDALEARV 183 (314)
T ss_dssp HHHHHHHHHHHHHHTSS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCTTCC-----HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCC-CcEEEEECchHHHHHHHHHhChh--------heeEEEEeCCCCCCC-----cchhhHHHHHh
Confidence 99999999999999998 99999999999999999999999 999999999875332 11112222222
Q ss_pred hcCCCCCCcHHHHHHHHHhh---ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 186 QSLPSSIPSRKWLVNHMMEL---GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
................+... ........+.............+............... .+....+.+++ +|+++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~--~P~Li 260 (314)
T 3kxp_A 184 NAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLR-SDLVPAYRDVT--KPVLI 260 (314)
T ss_dssp TTTCSCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTT-SCCHHHHHHCC--SCEEE
T ss_pred hhchhhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccC-cchhhHhhcCC--CCEEE
Confidence 22222222332222222211 11112222222222222222222222222222222221 14444555555 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|++|..++++..+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 261 i~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 261 VRGESSKLVSAAALAKTSRLRPD--------LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp EEETTCSSSCHHHHHHHHHHCTT--------SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred EecCCCccCCHHHHHHHHHhCCC--------ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99999999999888888777765 8999999999999999999999999999974
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=237.12 Aligned_cols=253 Identities=14% Similarity=0.153 Sum_probs=167.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|+ +|+|||+||++++...|..++..|.+. .||+|+++|+||||.|..+. . +++
T Consensus 9 ~g~~l~y~~~g~------~~~vv~lhG~~~~~~~~~~~~~~l~~~-------~g~~v~~~d~~G~G~s~~~~---~-~~~ 71 (272)
T 3fsg_A 9 TRSNISYFSIGS------GTPIIFLHGLSLDKQSTCLFFEPLSNV-------GQYQRIYLDLPGMGNSDPIS---P-STS 71 (272)
T ss_dssp CTTCCEEEEECC------SSEEEEECCTTCCHHHHHHHHTTSTTS-------TTSEEEEECCTTSTTCCCCS---S-CSH
T ss_pred cCCeEEEEEcCC------CCeEEEEeCCCCcHHHHHHHHHHHhcc-------CceEEEEecCCCCCCCCCCC---C-CCH
Confidence 688999999874 679999999999999999988887731 39999999999999998875 3 899
Q ss_pred HHHHHHHHHHHHH-hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 106 ANAANDLANLVKA-KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 106 ~~~~~~l~~~l~~-~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
+++++++.+++++ ++.+ +++++||||||.+|+.+|.++|+ +|+++|++++...................
T Consensus 72 ~~~~~~~~~~l~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~- 141 (272)
T 3fsg_A 72 DNVLETLIEAIEEIIGAR-RFILYGHSYGGYLAQAIAFHLKD--------QTLGVFLTCPVITADHSKRLTGKHINILE- 141 (272)
T ss_dssp HHHHHHHHHHHHHHHTTC-CEEEEEEEHHHHHHHHHHHHSGG--------GEEEEEEEEECSSCCGGGCCCCCCCCEEC-
T ss_pred HHHHHHHHHHHHHHhCCC-cEEEEEeCchHHHHHHHHHhChH--------hhheeEEECcccccCccccccccchhhhh-
Confidence 9999999999999 7888 99999999999999999999999 99999999987532211000000000000
Q ss_pred hhcCCCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc--cccCCCCCCc
Q 020518 185 LQSLPSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP--LLEHPPQGME 259 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P 259 (325)
.......... ....+.... .......+...... ............+... ...+... .+..+ ++|
T Consensus 142 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~P 210 (272)
T 3fsg_A 142 -EDINPVENKE--YFADFLSMNVIINNQAWHDYQNLIIP-----GLQKEDKTFIDQLQNN-YSFTFEEKLKNINY--QFP 210 (272)
T ss_dssp -SCCCCCTTGG--GHHHHHHHCSEESHHHHHHHHHHTHH-----HHHHCCHHHHHHHTTS-CSCTTHHHHTTCCC--SSC
T ss_pred -hhhhcccCHH--HHHHHHHHhccCCCchhHHHHHHhhh-----hhhhccHHHHHHHhhh-cCCChhhhhhhccC--CCC
Confidence 0000000000 000000000 00000000000000 0000001111111111 1111111 22333 489
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 211 ~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 267 (272)
T 3fsg_A 211 FKIMVGRNDQVVGYQEQLKLINHNEN--------GEIVLLNRTGHNLMIDQREAVGFHFDLFLDE 267 (272)
T ss_dssp EEEEEETTCTTTCSHHHHHHHTTCTT--------EEEEEESSCCSSHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcCCHHHHHHHHHhcCC--------CeEEEecCCCCCchhcCHHHHHHHHHHHHHH
Confidence 99999999999999888777766655 9999999999999999999999999999975
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=231.97 Aligned_cols=237 Identities=13% Similarity=0.099 Sum_probs=161.3
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW-D 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~ 122 (325)
+|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|..+.. ..++++++++++.+++++++. +
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~l~~l~~~~ 73 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLES--------AGHRVTAVELAASGIDPRPIQ--AVETVDEYSKPLIETLKSLPENE 73 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEEECCTTSTTCSSCGG--GCCSHHHHHHHHHHHHHTSCTTC
T ss_pred CCcEEEECCCCCccccHHHHHHHHHh--------CCCEEEEecCCCCcCCCCCCC--ccccHHHhHHHHHHHHHHhcccC
Confidence 58999999999999999999999997 789999999999999988654 468999999999999999998 6
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC-----------
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS----------- 191 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 191 (325)
+++|+||||||.+++.+|.++|+ +|+++|++++......... .................
T Consensus 74 -~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (258)
T 3dqz_A 74 -EVILVGFSFGGINIALAADIFPA--------KIKVLVFLNAFLPDTTHVP-SHVLDKYMEMPGGLGDCEFSSHETRNGT 143 (258)
T ss_dssp -CEEEEEETTHHHHHHHHHTTCGG--------GEEEEEEESCCCCCSSSCT-THHHHHHHTSTTCCTTCEEEEEEETTEE
T ss_pred -ceEEEEeChhHHHHHHHHHhChH--------hhcEEEEecCCCCCCCCcc-hHHHHHhcccchhhhhcccchhhhhccC
Confidence 99999999999999999999999 9999999998644332211 11111111100000000
Q ss_pred ----CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCC
Q 020518 192 ----IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267 (325)
Q Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 267 (325)
..... ................+......... .+...+... ....... ..++|+++|+|++
T Consensus 144 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~--~~~~P~l~i~g~~ 207 (258)
T 3dqz_A 144 MSLLKMGPK-FMKARLYQNCPIEDYELAKMLHRQGS----------FFTEDLSKK---EKFSEEG--YGSVQRVYVMSSE 207 (258)
T ss_dssp EEEEECCHH-HHHHHTSTTSCHHHHHHHHHHCCCEE----------CCHHHHHTS---CCCCTTT--GGGSCEEEEEETT
T ss_pred hhhhhhhHH-HHHHHhhccCCHHHHHHHHHhccCCc----------hhhhhhhcc---ccccccc--cccCCEEEEECCC
Confidence 00011 11111111111111111111100000 000000000 0000011 1148999999999
Q ss_pred CCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 268 SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 268 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+|+++
T Consensus 208 D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 256 (258)
T 3dqz_A 208 DKAIPCDFIRWMIDNFNV--------SKVYEIDGGDHMVMLSKPQKLFDSLSAIATD 256 (258)
T ss_dssp CSSSCHHHHHHHHHHSCC--------SCEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CeeeCHHHHHHHHHhCCc--------ccEEEcCCCCCchhhcChHHHHHHHHHHHHH
Confidence 999999888888877765 8999999999999999999999999999975
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=239.60 Aligned_cols=228 Identities=15% Similarity=0.150 Sum_probs=156.6
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--C
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--G 120 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--~ 120 (325)
+++.|||+||++++...|..+++.|++ .||+|+++|+||||.|.... ..++++++++|+.++++.+ +
T Consensus 50 ~~~~VlllHG~~~s~~~~~~la~~La~--------~Gy~Via~Dl~GhG~S~~~~---~~~~~~~~~~d~~~~~~~l~~~ 118 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQSMRFLAEGFAR--------AGYTVATPRLTGHGTTPAEM---AASTASDWTADIVAAMRWLEER 118 (281)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEECCCTTSSSCHHHH---HTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEECCCCCCCCCccc---cCCCHHHHHHHHHHHHHHHHhC
Confidence 356799999999999999999999998 89999999999999997543 4678999999999999887 5
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
.+ +++|+||||||.+++.+|.++|+ +|+++|++++....... . ...............
T Consensus 119 ~~-~v~lvG~S~GG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~-----~-~~~~~~~~~~~~~~~------- 176 (281)
T 4fbl_A 119 CD-VLFMTGLSMGGALTVWAAGQFPE--------RFAGIMPINAALRMESP-----D-LAALAFNPDAPAELP------- 176 (281)
T ss_dssp CS-EEEEEEETHHHHHHHHHHHHSTT--------TCSEEEEESCCSCCCCH-----H-HHHHHTCTTCCSEEE-------
T ss_pred CC-eEEEEEECcchHHHHHHHHhCch--------hhhhhhcccchhcccch-----h-hHHHHHhHhhHHhhh-------
Confidence 67 99999999999999999999999 99999999986433210 0 011110000000000
Q ss_pred HHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
...... ........... .........+..... .....+.+++ +|+|+|+|++|.+++++..+.+.
T Consensus 177 -----~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~l~~i~--~P~Lii~G~~D~~v~~~~~~~l~ 241 (281)
T 4fbl_A 177 -----GIGSDI---KAEGVKELAYP---VTPVPAIKHLITIGA--VAEMLLPRVK--CPALIIQSREDHVVPPHNGELIY 241 (281)
T ss_dssp -----CCCCCC---SSTTCCCCCCS---EEEGGGHHHHHHHHH--HHHHHGGGCC--SCEEEEEESSCSSSCTHHHHHHH
T ss_pred -----cchhhh---hhHHHHHhhhc---cCchHHHHHHHHhhh--hccccccccC--CCEEEEEeCCCCCcCHHHHHHHH
Confidence 000000 00000000000 000111111111000 1122345555 89999999999999999888887
Q ss_pred HHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
+.++. +++++++++++||++++| +|+++++.|.+||++
T Consensus 242 ~~l~~------~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 242 NGIGS------TEKELLWLENSYHVATLDNDKELILERSLAFIRK 280 (281)
T ss_dssp HHCCC------SSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHT
T ss_pred HhCCC------CCcEEEEECCCCCcCccccCHHHHHHHHHHHHHh
Confidence 77654 237999999999999987 499999999999975
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=238.20 Aligned_cols=261 Identities=15% Similarity=0.170 Sum_probs=171.5
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
+.++.|...++. .+++|+|||+||++++...|..+++.|.+ .||+|+++|+||||.|..+.. ..++++
T Consensus 31 ~~~~~~~~~~~~--~~~~p~vv~~hG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~--~~~~~~ 98 (315)
T 4f0j_A 31 PLSMAYLDVAPK--KANGRTILLMHGKNFCAGTWERTIDVLAD--------AGYRVIAVDQVGFCKSSKPAH--YQYSFQ 98 (315)
T ss_dssp EEEEEEEEECCS--SCCSCEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCSS--CCCCHH
T ss_pred CeeEEEeecCCC--CCCCCeEEEEcCCCCcchHHHHHHHHHHH--------CCCeEEEeecCCCCCCCCCCc--cccCHH
Confidence 445666666542 35689999999999999999999999997 799999999999999988764 588999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC--CCchhHHHHHHHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT--ENSEGEVEKVLQT 184 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~--~~~~~~~~~~~~~ 184 (325)
++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++....... .........+...
T Consensus 99 ~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
T 4f0j_A 99 QLAANTHALLERLGVA-RASVIGHSMGGMLATRYALLYPR--------QVERLVLVNPIGLEDWKALGVPWRSVDDWYRR 169 (315)
T ss_dssp HHHHHHHHHHHHTTCS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCSCSSCHHHHTCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-ceEEEEecHHHHHHHHHHHhCcH--------hhheeEEecCcccCCcccccchhhhhHHHHhh
Confidence 9999999999999999 99999999999999999999999 99999999986422100 0000011111111
Q ss_pred hhcCCCCCCcHHHHHHHHH----hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 185 LQSLPSSIPSRKWLVNHMM----ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
... . .......... ..........+............... ...............+....+..++ +|+
T Consensus 170 ~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~--~P~ 241 (315)
T 4f0j_A 170 DLQ---T--SAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRES-VAWNSALTYDMIFTQPVVYELDRLQ--MPT 241 (315)
T ss_dssp HTT---C--CHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHH-HHHHHHHHHHHHHHCCCGGGGGGCC--SCE
T ss_pred ccc---C--ChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcch-hhHHHHHhcCccccchhhhhcccCC--CCe
Confidence 100 0 0000110000 00111111111111000000000000 0000000111111223334455555 899
Q ss_pred EEEeeCCCCCCC----------------hHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWD----------------PDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|++|..++ .+..+.+.+..++ +++++++++||+++.++|+++++.|.+||++
T Consensus 242 lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 242 LLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQ--------ATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp EEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTT--------EEEEEETTCCSCHHHHSHHHHHHHHHHHHCC
T ss_pred EEEEecCCCcCccccccccccccccccchhhhhHHHhhcCC--------ceEEEeCCCCcchhhhCHHHHHHHHHHHhcc
Confidence 999999999998 6666666666554 9999999999999999999999999999975
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=236.60 Aligned_cols=249 Identities=14% Similarity=0.170 Sum_probs=165.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|. +|+|||+||++++...|..+++.|.+ .|+|+++|+||||.|..+. ..++
T Consensus 17 ~~g~~l~~~~~g~------~~~vv~lHG~~~~~~~~~~~~~~L~~---------~~~vi~~D~~G~G~S~~~~---~~~~ 78 (301)
T 3kda_A 17 VDGVKLHYVKGGQ------GPLVMLVHGFGQTWYEWHQLMPELAK---------RFTVIAPDLPGLGQSEPPK---TGYS 78 (301)
T ss_dssp ETTEEEEEEEEES------SSEEEEECCTTCCGGGGTTTHHHHTT---------TSEEEEECCTTSTTCCCCS---SCSS
T ss_pred eCCeEEEEEEcCC------CCEEEEECCCCcchhHHHHHHHHHHh---------cCeEEEEcCCCCCCCCCCC---CCcc
Confidence 3788999999984 68999999999999999999999984 4999999999999999874 6899
Q ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC----------
Q 020518 105 IANAANDLANLVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN---------- 173 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~---------- 173 (325)
++++++|+.+++++++.+ + ++|+||||||.+++.+|.++|+ +|+++|++++.........
T Consensus 79 ~~~~~~~l~~~l~~l~~~-~p~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 149 (301)
T 3kda_A 79 GEQVAVYLHKLARQFSPD-RPFDLVAHDIGIWNTYPMVVKNQA--------DIARLVYMEAPIPDARIYRFPAFTAQGES 149 (301)
T ss_dssp HHHHHHHHHHHHHHHCSS-SCEEEEEETHHHHTTHHHHHHCGG--------GEEEEEEESSCCSSGGGGGSBSEETTEEC
T ss_pred HHHHHHHHHHHHHHcCCC-ccEEEEEeCccHHHHHHHHHhChh--------hccEEEEEccCCCCCCccchhhhcchhhh
Confidence 999999999999999998 6 9999999999999999999999 9999999998643221100
Q ss_pred --chhHHHH----HHHHhhcCCCCCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhc
Q 020518 174 --SEGEVEK----VLQTLQSLPSSIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS 241 (325)
Q Consensus 174 --~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (325)
+...... ....+. .. ........+.... ......+.......... ........+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 217 (301)
T 3kda_A 150 LVWHFSFFAADDRLAETLI----AG-KERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPH-------SLNASFEYYRA 217 (301)
T ss_dssp SSTHHHHHHCSTTHHHHHH----TT-CHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHH-------HHHHHHHHHHT
T ss_pred hhhhHHHhhcCcchHHHHh----cc-chHHHHHHHHHhccCCcccCCHHHHHHHHHHhcccc-------ccchHHHHHHh
Confidence 0000000 000000 00 0000111111100 00010111110000000 00000111111
Q ss_pred c-----cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHH
Q 020518 242 Y-----REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLE 316 (325)
Q Consensus 242 ~-----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 316 (325)
. ........+..+ ++|+++|+|++| +++...+.+.+..++ +++++++++||++++|+|+++++
T Consensus 218 ~~~~~~~~~~~~~~l~~i--~~P~l~i~G~~D--~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~ 285 (301)
T 3kda_A 218 LNESVRQNAELAKTRLQM--PTMTLAGGGAGG--MGTFQLEQMKAYAED--------VEGHVLPGCGHWLPEECAAPMNR 285 (301)
T ss_dssp HHHHHHHHHHHTTSCBCS--CEEEEEECSTTS--CTTHHHHHHHTTBSS--------EEEEEETTCCSCHHHHTHHHHHH
T ss_pred hccchhhcccchhhcccc--CcceEEEecCCC--CChhHHHHHHhhccc--------CeEEEcCCCCcCchhhCHHHHHH
Confidence 0 000111122244 489999999999 666777777666655 99999999999999999999999
Q ss_pred HHHHHHhc
Q 020518 317 IVAPRIAS 324 (325)
Q Consensus 317 ~i~~fl~~ 324 (325)
.|.+|+++
T Consensus 286 ~i~~~l~~ 293 (301)
T 3kda_A 286 LVIDFLSR 293 (301)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 99999975
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=235.75 Aligned_cols=250 Identities=19% Similarity=0.238 Sum_probs=173.2
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-CCCCCCHH
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-LDPPHDIA 106 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 106 (325)
.+++|...|+. +|+|||+||++++...|..+++.|. +||+|+++|+||||.|..+.. ....++++
T Consensus 9 ~~l~~~~~g~~-----~p~vv~~HG~~~~~~~~~~~~~~l~---------~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 74 (269)
T 4dnp_A 9 DALNVRVVGSG-----ERVLVLAHGFGTDQSAWNRILPFFL---------RDYRVVLYDLVCAGSVNPDFFDFRRYTTLD 74 (269)
T ss_dssp HHTTCEEECSC-----SSEEEEECCTTCCGGGGTTTGGGGT---------TTCEEEEECCTTSTTSCGGGCCTTTCSSSH
T ss_pred HHhhhhhcCCC-----CCEEEEEeCCCCcHHHHHHHHHHHh---------CCcEEEEEcCCCCCCCCCCCCCccccCcHH
Confidence 35778887763 6899999999999999999888777 789999999999999976211 11455999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC-----chhHHHHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN-----SEGEVEKV 181 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~-----~~~~~~~~ 181 (325)
++++++.+++++++.+ +++++||||||.+|+.+|.++|+ +|+++|++++.+....... ........
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~l~GhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (269)
T 4dnp_A 75 PYVDDLLHILDALGID-CCAYVGHSVSAMIGILASIRRPE--------LFSKLILIGASPRFLNDEDYHGGFEQGEIEKV 145 (269)
T ss_dssp HHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCSCCBCBTTBCCSBCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-eEEEEccCHHHHHHHHHHHhCcH--------hhceeEEeCCCCCCCChHHhccccchHHHHHH
Confidence 9999999999999999 99999999999999999999999 9999999998754332211 11111222
Q ss_pred HHHhhcCCCCCCcHHHHHHHHH----hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMM----ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
...+.. ........+. ..........+...... ................+....+..++
T Consensus 146 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~-- 208 (269)
T 4dnp_A 146 FSAMEA------NYEAWVNGFAPLAVGADVPAAVREFSRTLFN---------MRPDITLFVSRTVFNSDMRGVLGLVK-- 208 (269)
T ss_dssp HHHHHH------CHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH---------SCHHHHHHHHHHHHTCCCGGGGGGCC--
T ss_pred HHhccc------cHHHHHHHhhhhhccCCChhHHHHHHHHHHc---------cCcchhhhHhhhhcchhhHhhhcccc--
Confidence 211111 0011111111 01111111111111100 11222222333333444555566665
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|+++|+|++|..++++..+.+.+.+++ .+++++++++||++++|+|+++++.|.+||++
T Consensus 209 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 209 VPCHIFQTARDHSVPASVATYLKNHLGG-------KNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp SCEEEEEEESBTTBCHHHHHHHHHHSSS-------CEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred CCEEEEecCCCcccCHHHHHHHHHhCCC-------CceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 8999999999999999888777776654 27999999999999999999999999999974
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=225.50 Aligned_cols=251 Identities=18% Similarity=0.181 Sum_probs=169.4
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
...+|.+++|...|+ +|+|||+||++++...|..+++.|. +||+|+++|+||||.|..+ ..
T Consensus 8 ~~~~g~~l~~~~~g~------~~~vv~lHG~~~~~~~~~~~~~~l~---------~~~~vi~~d~~G~G~S~~~----~~ 68 (262)
T 3r0v_A 8 PSSDGTPIAFERSGS------GPPVVLVGGALSTRAGGAPLAERLA---------PHFTVICYDRRGRGDSGDT----PP 68 (262)
T ss_dssp ECTTSCEEEEEEEEC------SSEEEEECCTTCCGGGGHHHHHHHT---------TTSEEEEECCTTSTTCCCC----SS
T ss_pred EcCCCcEEEEEEcCC------CCcEEEECCCCcChHHHHHHHHHHh---------cCcEEEEEecCCCcCCCCC----CC
Confidence 335789999999885 6799999999999999999999888 7999999999999999886 36
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCc--hhHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENS--EGEVEK 180 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~--~~~~~~ 180 (325)
++++++++|+.+++++++ + +++++||||||.+++.+|.++| +|+++|++++.......... ......
T Consensus 69 ~~~~~~~~~~~~~~~~l~-~-~~~l~G~S~Gg~ia~~~a~~~p---------~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 137 (262)
T 3r0v_A 69 YAVEREIEDLAAIIDAAG-G-AAFVFGMSSGAGLSLLAAASGL---------PITRLAVFEPPYAVDDSRPPVPPDYQTR 137 (262)
T ss_dssp CCHHHHHHHHHHHHHHTT-S-CEEEEEETHHHHHHHHHHHTTC---------CEEEEEEECCCCCCSTTSCCCCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhcC-C-CeEEEEEcHHHHHHHHHHHhCC---------CcceEEEEcCCcccccccchhhhHHHHH
Confidence 899999999999999999 7 9999999999999999999987 59999999987544322111 111111
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhh--ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMEL--GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
....+... ........+... .......+.+....... ............... ..........+..++ +
T Consensus 138 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~--~ 207 (262)
T 3r0v_A 138 LDALLAEG-----RRGDAVTYFMTEGVGVPPDLVAQMQQAPMWP-GMEAVAHTLPYDHAV--MGDNTIPTARFASIS--I 207 (262)
T ss_dssp HHHHHHTT-----CHHHHHHHHHHHTSCCCHHHHHHHHTSTTHH-HHHHTGGGHHHHHHH--HTTSCCCHHHHTTCC--S
T ss_pred HHHHhhcc-----chhhHHHHHhhcccCCCHHHHHHHHhhhccc-chHHHHhhhhhhhhh--hhcCCCCHHHcCcCC--C
Confidence 11111110 111112222111 11111111111100000 000000000000000 111122234455554 8
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+++|+|++|..++++..+.+.+.+++ +++++++++|| +++|+++++.|.+||++
T Consensus 208 P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 208 PTLVMDGGASPAWIRHTAQELADTIPN--------ARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHSTT--------EEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred CEEEEeecCCCCCCHHHHHHHHHhCCC--------CeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 999999999999998888888887766 99999999999 47899999999999964
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=239.49 Aligned_cols=117 Identities=23% Similarity=0.336 Sum_probs=105.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC--CCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--PPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~--~~~ 103 (325)
+|.+++|.+.|. +++|||+||++++...|..+++.|. ++|+|+++|+||||.|..+.... ..+
T Consensus 13 ~~~~~~~~~~g~------g~~~vllHG~~~~~~~w~~~~~~l~---------~~~~vi~~Dl~G~G~s~~~~~~~~~~~~ 77 (291)
T 3qyj_A 13 TEARINLVKAGH------GAPLLLLHGYPQTHVMWHKIAPLLA---------NNFTVVATDLRGYGDSSRPASVPHHINY 77 (291)
T ss_dssp SSCEEEEEEECC------SSEEEEECCTTCCGGGGTTTHHHHT---------TTSEEEEECCTTSTTSCCCCCCGGGGGG
T ss_pred CCeEEEEEEcCC------CCeEEEECCCCCCHHHHHHHHHHHh---------CCCEEEEEcCCCCCCCCCCCCCcccccc
Confidence 678999998875 6899999999999999999999887 78999999999999998765310 138
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+.+++|+.++++.++.+ +++++||||||.+|+.+|.++|+ +|+++|++++.+
T Consensus 78 ~~~~~~~~~~~~~~~l~~~-~~~l~GhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~p 131 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSKLGYE-QFYVVGHDRGARVAHRLALDHPH--------RVKKLALLDIAP 131 (291)
T ss_dssp SHHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCC
T ss_pred CHHHHHHHHHHHHHHcCCC-CEEEEEEChHHHHHHHHHHhCch--------hccEEEEECCCC
Confidence 9999999999999999998 99999999999999999999999 999999998754
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-35 Score=241.13 Aligned_cols=257 Identities=14% Similarity=0.152 Sum_probs=161.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC--CCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--PPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~--~~~ 103 (325)
+|.+++|...|. +|+|||+||++++...|..+++.|. +||+|+++|+||||.|..+.... ..+
T Consensus 21 ~g~~l~~~~~g~------~~~vv~lHG~~~~~~~~~~~~~~l~---------~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 85 (306)
T 3r40_A 21 SSGRIFARVGGD------GPPLLLLHGFPQTHVMWHRVAPKLA---------ERFKVIVADLPGYGWSDMPESDEQHTPY 85 (306)
T ss_dssp TTCCEEEEEEEC------SSEEEEECCTTCCGGGGGGTHHHHH---------TTSEEEEECCTTSTTSCCCCCCTTCGGG
T ss_pred CCEEEEEEEcCC------CCeEEEECCCCCCHHHHHHHHHHhc---------cCCeEEEeCCCCCCCCCCCCCCcccCCC
Confidence 788999999884 6899999999999999999999998 79999999999999999876300 168
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH-HH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK-VL 182 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~-~~ 182 (325)
+++++++|+.+++++++.+ +++|+||||||.+++.+|.++|+ +|+++|++++.+.............. ..
T Consensus 86 ~~~~~~~~~~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 156 (306)
T 3r40_A 86 TKRAMAKQLIEAMEQLGHV-HFALAGHNRGARVSYRLALDSPG--------RLSKLAVLDILPTYEYWQRMNRAYALKIY 156 (306)
T ss_dssp SHHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCHHHHHHHCSHHHHHHST
T ss_pred CHHHHHHHHHHHHHHhCCC-CEEEEEecchHHHHHHHHHhChh--------hccEEEEecCCCCccchhhhhhhhhhhhH
Confidence 9999999999999999999 99999999999999999999999 99999999985421100000000000 00
Q ss_pred HHhhcCCCC-------CCcHHHHHHHHHhh--------ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 183 QTLQSLPSS-------IPSRKWLVNHMMEL--------GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 183 ~~~~~~~~~-------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
......... .............. .......+......... .........+......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 229 (306)
T 3r40_A 157 HWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADP-------MRRHVMCEDYRAGAYADF 229 (306)
T ss_dssp HHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSH-------HHHHHHHHHHHHHHTHHH
T ss_pred HHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccC-------CCcchhhHHHHhcccccc
Confidence 000000000 00000111111100 00000000000000000 000000111111100000
Q ss_pred c------ccccCCCCCCcEEEEeeCCCCCCC-hHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHH
Q 020518 248 W------PLLEHPPQGMEIAIVRAEKSDRWD-PDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320 (325)
Q Consensus 248 ~------~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 320 (325)
. ..+..++ +|+++|+|++|.+++ ....+.+.+..++ ++++++ ++||++++|+|+++++.|.+
T Consensus 230 ~~~~~~~~~l~~i~--~P~lii~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~~-~~gH~~~~e~p~~~~~~i~~ 298 (306)
T 3r40_A 230 EHDKIDVEAGNKIP--VPMLALWGASGIAQSAATPLDVWRKWASD--------VQGAPI-ESGHFLPEEAPDQTAEALVR 298 (306)
T ss_dssp HHHHHHHHHTCCBC--SCEEEEEETTCC------CHHHHHHHBSS--------EEEEEE-SSCSCHHHHSHHHHHHHHHH
T ss_pred hhhhhhhhhccCCC--cceEEEEecCCcccCchhHHHHHHhhcCC--------CeEEEe-cCCcCchhhChHHHHHHHHH
Confidence 0 1234444 899999999999888 4555556665555 899999 68999999999999999999
Q ss_pred HHhc
Q 020518 321 RIAS 324 (325)
Q Consensus 321 fl~~ 324 (325)
||++
T Consensus 299 fl~~ 302 (306)
T 3r40_A 299 FFSA 302 (306)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9975
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=232.01 Aligned_cols=241 Identities=9% Similarity=0.060 Sum_probs=161.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG- 120 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~- 120 (325)
.++|+|||+||++++...|..+++.|.+ .||+|+++|+||||.|..+.. ..++++++++++.+++++++
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~~--------~g~~v~~~D~~G~G~S~~~~~--~~~~~~~~~~~~~~~l~~l~~ 79 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMRS--------SGHNVTALDLGASGINPKQAL--QIPNFSDYLSPLMEFMASLPA 79 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTCSCCGG--GCCSHHHHHHHHHHHHHTSCT
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHHh--------cCCeEEEeccccCCCCCCcCC--ccCCHHHHHHHHHHHHHhcCC
Confidence 4589999999999999999999999987 789999999999999998754 45899999999999999995
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC-------C--
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS-------S-- 191 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-- 191 (325)
.+ +++|+||||||.+++.+|.++|+ +|+++|++++........ ................. .
T Consensus 80 ~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (267)
T 3sty_A 80 NE-KIILVGHALGGLAISKAMETFPE--------KISVAVFLSGLMPGPNID-ATTVCTKAGSAVLGQLDNCVTYENGPT 149 (267)
T ss_dssp TS-CEEEEEETTHHHHHHHHHHHSGG--------GEEEEEEESCCCCBTTBC-HHHHHHHHHHTTTTCTTCEEECTTCTT
T ss_pred CC-CEEEEEEcHHHHHHHHHHHhChh--------hcceEEEecCCCCCCcch-HHHHHHHhcccchhhhhhhhhhhhhhh
Confidence 77 99999999999999999999999 999999999865332211 11111111000000000 0
Q ss_pred -CC----cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 192 -IP----SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 192 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
.. ....................+......... ......+.. . .. ..... ..++|+++|+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~-~~---~~~~~--~~~~P~l~i~g~ 215 (267)
T 3sty_A 150 NPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLY-----LYLAEDISK---E-VV---LSSKR--YGSVKRVFIVAT 215 (267)
T ss_dssp SCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEE-----CCCHHHHHH---H-CC---CCTTT--GGGSCEEEEECC
T ss_pred cccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccch-----hHHHHHhhc---c-hh---ccccc--ccCCCEEEEEeC
Confidence 00 000111111111111111111111110000 000000000 0 00 00000 014899999999
Q ss_pred CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 267 KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 267 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+|+++
T Consensus 216 ~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 265 (267)
T 3sty_A 216 ENDALKKEFLKLMIEKNPP--------DEVKEIEGSDHVTMMSKPQQLFTTLLSIANK 265 (267)
T ss_dssp CSCHHHHHHHHHHHHHSCC--------SEEEECTTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCC--------ceEEEeCCCCccccccChHHHHHHHHHHHHh
Confidence 9999998888877777765 8999999999999999999999999999975
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=229.79 Aligned_cols=233 Identities=13% Similarity=0.104 Sum_probs=164.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCC--CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS--GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+|.+|++..+.+.....++|+|||+||++++ ...|..+++.|.+ .||+|+++|+||||.|.... ..+
T Consensus 9 ~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~ 77 (251)
T 2wtm_A 9 DGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNE--------IGVATLRADMYGHGKSDGKF---EDH 77 (251)
T ss_dssp TTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHH--------TTCEEEEECCTTSTTSSSCG---GGC
T ss_pred CCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHH--------CCCEEEEecCCCCCCCCCcc---ccC
Confidence 6788888877764322357889999999999 7889999999987 79999999999999998753 467
Q ss_pred CHHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 104 DIANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
++.++++|+.++++.+. .+ +++|+||||||.+++.+|.++|+ +|+++|++++..... .
T Consensus 78 ~~~~~~~d~~~~~~~l~~~~~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~---------~ 139 (251)
T 2wtm_A 78 TLFKWLTNILAVVDYAKKLDFVT-DIYMAGHSQGGLSVMLAAAMERD--------IIKALIPLSPAAMIP---------E 139 (251)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTEE-EEEEEEETHHHHHHHHHHHHTTT--------TEEEEEEESCCTTHH---------H
T ss_pred CHHHHHHHHHHHHHHHHcCcccc-eEEEEEECcchHHHHHHHHhCcc--------cceEEEEECcHHHhH---------H
Confidence 89999999999999884 56 89999999999999999999999 999999998753110 0
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
...... ....... ..........+ ........ + +......+....+.+++ +|
T Consensus 140 ~~~~~~--~~~~~~~---------~~~~~~~~~~~-----------~~~~~~~~-~---~~~~~~~~~~~~~~~i~--~P 191 (251)
T 2wtm_A 140 IARTGE--LLGLKFD---------PENIPDELDAW-----------DGRKLKGN-Y---VRVAQTIRVEDFVDKYT--KP 191 (251)
T ss_dssp HHHHTE--ETTEECB---------TTBCCSEEEET-----------TTEEEETH-H---HHHHTTCCHHHHHHHCC--SC
T ss_pred HHhhhh--hccccCC---------chhcchHHhhh-----------hccccchH-H---HHHHHccCHHHHHHhcC--CC
Confidence 000000 0000000 00000000000 00000000 0 11111122233344444 89
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|+|++|..++++..+.+.+.+++ +++++++++||++ .|+|+++++.|.+||++
T Consensus 192 ~lii~G~~D~~v~~~~~~~~~~~~~~--------~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 247 (251)
T 2wtm_A 192 VLIVHGDQDEAVPYEASVAFSKQYKN--------CKLVTIPGDTHCY-DHHLELVTEAVKEFMLE 247 (251)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHSSS--------EEEEEETTCCTTC-TTTHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcChHHHHHHHHhCCC--------cEEEEECCCCccc-chhHHHHHHHHHHHHHH
Confidence 99999999999999888888777654 9999999999999 99999999999999964
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=231.99 Aligned_cols=254 Identities=15% Similarity=0.153 Sum_probs=174.8
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC-CCHH
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP-HDIA 106 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~~ 106 (325)
.+++|...|.. +|+|||+||++++...|..+++.|. +||+|+++|+||||.|..+...... .+++
T Consensus 17 ~~~~~~~~g~~-----~~~vv~lHG~~~~~~~~~~~~~~l~---------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 82 (282)
T 3qvm_A 17 KRNNINITGGG-----EKTVLLAHGFGCDQNMWRFMLPELE---------KQFTVIVFDYVGSGQSDLESFSTKRYSSLE 82 (282)
T ss_dssp HHTTCEEEECS-----SCEEEEECCTTCCGGGGTTTHHHHH---------TTSEEEECCCTTSTTSCGGGCCTTGGGSHH
T ss_pred hhcceeecCCC-----CCeEEEECCCCCCcchHHHHHHHHh---------cCceEEEEecCCCCCCCCCCCCccccccHH
Confidence 46677777753 5899999999999999999999998 7999999999999999876421123 3899
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC------CchhHHHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE------NSEGEVEK 180 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~------~~~~~~~~ 180 (325)
++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+...... ........
T Consensus 83 ~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T 3qvm_A 83 GYAKDVEEILVALDLV-NVSIIGHSVSSIIAGIASTHVGD--------RISDITMICPSPCFMNFPPDYVGGFERDDLEE 153 (282)
T ss_dssp HHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHHGG--------GEEEEEEESCCSBSBEETTTEECSBCHHHHHH
T ss_pred HHHHHHHHHHHHcCCC-ceEEEEecccHHHHHHHHHhCch--------hhheEEEecCcchhccCchhhhchhccccHHH
Confidence 9999999999999998 99999999999999999999999 999999999875432211 11111122
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
....+...... .....................+..... .................+....+..++ +|+
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~ 221 (282)
T 3qvm_A 154 LINLMDKNYIG--WANYLAPLVMGASHSSELIGELSGSFC--------TTDPIVAKTFAKATFFSDYRSLLEDIS--TPA 221 (282)
T ss_dssp HHHHHHHCHHH--HHHHHHHHHHCTTSCHHHHHHHHHHHH--------HSCHHHHHHHHHHHHSCBCGGGGGGCC--SCE
T ss_pred HHHHHhcchhh--HHHHHHhhccCCccchhhHHHHHHHHh--------cCCcHHHHHHHHHHhcccHHHHHhcCC--CCe
Confidence 22111110000 000000111111111111111111110 011222222233333334445556665 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|++|..++++..+.+.+.+++ +++++++++||+++.++|+++++.|.+||++
T Consensus 222 l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 277 (282)
T 3qvm_A 222 LIFQSAKDSLASPEVGQYMAENIPN--------SQLELIQAEGHCLHMTDAGLITPLLIHFIQN 277 (282)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHSSS--------EEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcCCHHHHHHHHHhCCC--------CcEEEecCCCCcccccCHHHHHHHHHHHHHh
Confidence 9999999999999888888777765 9999999999999999999999999999975
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=229.00 Aligned_cols=257 Identities=12% Similarity=0.131 Sum_probs=165.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHH-----HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRS-----FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~-----~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 98 (325)
.++.+++|...|++. +++|+|||+||++++... |.. +++.|+ ++|+|+++|+||||.|.....
T Consensus 18 ~~~~~l~y~~~G~~~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~s~~~~~ 86 (286)
T 2qmq_A 18 TPYGSVTFTVYGTPK--PKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII---------QNFVRVHVDAPGMEEGAPVFP 86 (286)
T ss_dssp ETTEEEEEEEESCCC--TTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHH---------TTSCEEEEECTTTSTTCCCCC
T ss_pred cCCeEEEEEeccCCC--CCCCeEEEeCCCCCCchhhhhhhhhhchhHHHh---------cCCCEEEecCCCCCCCCCCCC
Confidence 468899999998632 257899999999999874 665 677777 679999999999998865432
Q ss_pred CCCC-CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 99 LDPP-HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 99 ~~~~-~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
.... ++++++++++.+++++++.+ +++|+||||||.+++.+|.++|+ +|+++|++++.+.... ....
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~---~~~~ 154 (286)
T 2qmq_A 87 LGYQYPSLDQLADMIPCILQYLNFS-TIIGVGVGAGAYILSRYALNHPD--------TVEGLVLINIDPNAKG---WMDW 154 (286)
T ss_dssp TTCCCCCHHHHHHTHHHHHHHHTCC-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCCCCC---HHHH
T ss_pred CCCCccCHHHHHHHHHHHHHHhCCC-cEEEEEEChHHHHHHHHHHhChh--------heeeEEEECCCCcccc---hhhh
Confidence 1111 49999999999999999998 99999999999999999999999 9999999998653321 1111
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCc-ccccccC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS-YWPLLEH 253 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 253 (325)
... ....... .........+.... ......+.+.......... .....+...+......+ ....+..
T Consensus 155 ~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~ 225 (286)
T 2qmq_A 155 AAH---KLTGLTS--SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNL----ENIELYWNSYNNRRDLNFERGGETT 225 (286)
T ss_dssp HHH---HHHHTTS--CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTH----HHHHHHHHHHHTCCCCCSEETTEEC
T ss_pred hhh---hhccccc--cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCc----chHHHHHHHHhhhhhhhhhhchhcc
Confidence 111 1111100 00111111111000 0011111111111100000 00111222222212211 1234455
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhh-hcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN-RQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++ +|+++|+|++|..++ ...+.+.+..+ + +++++++++||++++|+|+++++.|.+||++
T Consensus 226 i~--~P~lii~G~~D~~~~-~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 286 (286)
T 2qmq_A 226 LK--CPVMLVVGDQAPHED-AVVECNSKLDPTQ--------TSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286 (286)
T ss_dssp CC--SCEEEEEETTSTTHH-HHHHHHHHSCGGG--------EEEEEETTCTTCHHHHCHHHHHHHHHHHHCC
T ss_pred CC--CCEEEEecCCCcccc-HHHHHHHHhcCCC--------ceEEEeCCCCCcccccChHHHHHHHHHHhcC
Confidence 54 899999999998886 44445555444 3 9999999999999999999999999999963
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=238.36 Aligned_cols=253 Identities=18% Similarity=0.224 Sum_probs=167.5
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
+.+++|...+. ++|+|||+||++++...|..++..|.+ +||+|+++|+||||.|..+......++++
T Consensus 12 ~~~~~~~~~~~-----~~~~vv~lHG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (279)
T 4g9e_A 12 HGRIAVRESEG-----EGAPLLMIHGNSSSGAIFAPQLEGEIG--------KKWRVIAPDLPGHGKSTDAIDPDRSYSME 78 (279)
T ss_dssp TEEEEEEECCC-----CEEEEEEECCTTCCGGGGHHHHHSHHH--------HHEEEEEECCTTSTTSCCCSCHHHHSSHH
T ss_pred CceEEEEecCC-----CCCeEEEECCCCCchhHHHHHHhHHHh--------cCCeEEeecCCCCCCCCCCCCcccCCCHH
Confidence 44889988875 378999999999999999999998555 79999999999999998853212467999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
++++++.++++.++.+ +++++||||||.+|+.+|.++|+ +.++|++++++....... ........ ..
T Consensus 79 ~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~---------~~~~vl~~~~~~~~~~~~--~~~~~~~~-~~ 145 (279)
T 4g9e_A 79 GYADAMTEVMQQLGIA-DAVVFGWSLGGHIGIEMIARYPE---------MRGLMITGTPPVAREEVG--QGFKSGPD-MA 145 (279)
T ss_dssp HHHHHHHHHHHHHTCC-CCEEEEETHHHHHHHHHTTTCTT---------CCEEEEESCCCCCGGGHH--HHBCCSTT-GG
T ss_pred HHHHHHHHHHHHhCCC-ceEEEEECchHHHHHHHHhhCCc---------ceeEEEecCCCCCCCccc--hhhccchh-hh
Confidence 9999999999999999 99999999999999999999996 788888887653321100 00000000 00
Q ss_pred cCCCCCCcHHH---HHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 187 SLPSSIPSRKW---LVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 187 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
........... .................+..... .........+......+....+..++ +|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~l~i 214 (279)
T 4g9e_A 146 LAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDG---------RARRIMFEKFGSGTGGNQRDIVAEAQ--LPIAVV 214 (279)
T ss_dssp GGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCH---------HHHHHHHHHHHHTCBCCHHHHHHHCC--SCEEEE
T ss_pred hcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhc---------cchHHHHHHhhccCCchHHHHHHhcC--CCEEEE
Confidence 00001111111 11111111111111111111000 00111111222222233334445554 899999
Q ss_pred eeCCCCCCChHHHHHHH-HHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLE-GLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|++|..++++..+.+. +..++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 215 ~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (279)
T 4g9e_A 215 NGRDEPFVELDFVSKVKFGNLWE--------GKTHVIDNAGHAPFREAPAEFDAYLARFIRD 268 (279)
T ss_dssp EETTCSSBCHHHHTTCCCSSBGG--------GSCEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred EcCCCcccchHHHHHHhhccCCC--------CeEEEECCCCcchHHhCHHHHHHHHHHHHHH
Confidence 99999999987765554 33333 8999999999999999999999999999974
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-33 Score=230.42 Aligned_cols=248 Identities=17% Similarity=0.147 Sum_probs=166.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~~~~ 104 (325)
++.+++|...|+ +++++|||+||++++...|..+++.|+ +||+|+++|+||| |.|..+. ..++
T Consensus 53 ~~~~~~~~~~g~----~~~~~vv~lHG~~~~~~~~~~~~~~L~---------~g~~vi~~D~~G~gG~s~~~~---~~~~ 116 (306)
T 2r11_A 53 RFGQTHVIASGP----EDAPPLVLLHGALFSSTMWYPNIADWS---------SKYRTYAVDIIGDKNKSIPEN---VSGT 116 (306)
T ss_dssp TTEEEEEEEESC----TTSCEEEEECCTTTCGGGGTTTHHHHH---------HHSEEEEECCTTSSSSCEECS---CCCC
T ss_pred CCceEEEEeeCC----CCCCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEecCCCCCCCCCCCC---CCCC
Confidence 455888888775 247899999999999999999999988 6899999999999 8887654 5789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++++++.+++++++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++...... ...........
T Consensus 117 ~~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~--~~~~~~~~~~~- 184 (306)
T 2r11_A 117 RTDYANWLLDVFDNLGIE-KSHMIGLSLGGLHTMNFLLRMPE--------RVKSAAILSPAETFLP--FHHDFYKYALG- 184 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCSSBTSC--CCHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHhcCCC-ceeEEEECHHHHHHHHHHHhCcc--------ceeeEEEEcCccccCc--ccHHHHHHHhH-
Confidence 999999999999999998 99999999999999999999999 9999999998754421 11111111111
Q ss_pred hhcCCCCCCcHHHHHHHHHhhccch--hH--HHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 185 LQSLPSSIPSRKWLVNHMMELGFSK--SL--SEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
... ......+...+....... .. ........... ...+...............+..++ +|+
T Consensus 185 --~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~--~P~ 249 (306)
T 2r11_A 185 --LTA--SNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDG---------SRNPNPNADGFPYVFTDEELRSAR--VPI 249 (306)
T ss_dssp --TTS--TTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSS---------SCCCCCCTTSSSCBCCHHHHHTCC--SCE
T ss_pred --HHH--HHHHHHHHHHhhCCccccccccccccHHHHHHHHh---------hhhhhhhccCCCCCCCHHHHhcCC--CCE
Confidence 000 000111111111100000 00 00000000000 000000000001112223344554 899
Q ss_pred EEEeeCCCCCCChHHHHH-HHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQR-LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|++|..++++.... +.+..++ +++++++++||++++|+|+++++.|.+||++
T Consensus 250 lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 250 LLLLGEHEVIYDPHSALHRASSFVPD--------IEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp EEEEETTCCSSCHHHHHHHHHHHSTT--------CEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred EEEEeCCCcccCHHHHHHHHHHHCCC--------CEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 999999999999876653 3334444 8999999999999999999999999999963
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=242.13 Aligned_cols=257 Identities=20% Similarity=0.268 Sum_probs=169.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.++.+++|..+|+. +|+|||+||++++...|..++.. -||+|+++|+||||.|..+.. ..++
T Consensus 67 ~~~~~~~~~~~g~~-----~~~vv~~hG~~~~~~~~~~~~~~-----------lg~~Vi~~D~~G~G~S~~~~~--~~~~ 128 (330)
T 3p2m_A 67 VQAGAISALRWGGS-----APRVIFLHGGGQNAHTWDTVIVG-----------LGEPALAVDLPGHGHSAWRED--GNYS 128 (330)
T ss_dssp EEETTEEEEEESSS-----CCSEEEECCTTCCGGGGHHHHHH-----------SCCCEEEECCTTSTTSCCCSS--CBCC
T ss_pred ecCceEEEEEeCCC-----CCeEEEECCCCCccchHHHHHHH-----------cCCeEEEEcCCCCCCCCCCCC--CCCC
Confidence 35678999999864 78999999999999999887654 357999999999999996654 6889
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++++|+.+++++++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++.+..................
T Consensus 129 ~~~~a~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 199 (330)
T 3p2m_A 129 PQLNSETLAPVLRELAPG-AEFVVGMSLGGLTAIRLAAMAPD--------LVGELVLVDVTPSALQRHAELTAEQRGTVA 199 (330)
T ss_dssp HHHHHHHHHHHHHHSSTT-CCEEEEETHHHHHHHHHHHHCTT--------TCSEEEEESCCHHHHHHHHHHTCC------
T ss_pred HHHHHHHHHHHHHHhCCC-CcEEEEECHhHHHHHHHHHhChh--------hcceEEEEcCCCccchhhhhhhhhhhhhhh
Confidence 999999999999999998 99999999999999999999999 999999999753210000000000000000
Q ss_pred hhcCCCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCC-CcccccccChhHHHHhhhccc-CCcccccccCCCCCCc
Q 020518 185 LQSLPSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKS-GERETWAFNLDGAVQMFNSYR-EMSYWPLLEHPPQGME 259 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P 259 (325)
...................... ........+....... .....+... .+.... ..+.+..+..++ +|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~i~--~P 271 (330)
T 3p2m_A 200 LMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYD------AIRTFGDFAGLWDDVDALS--AP 271 (330)
T ss_dssp -----CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSC------CCSBCCCHHHHHHHHHHCC--SC
T ss_pred hhcCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeec------hhhCccccHHHHHHHhhCC--CC
Confidence 0000111112222222221111 1111111111111110 100001000 000000 001122344444 89
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCcee-EEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVS-VHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|+|++|..++++..+.+.+.+++ ++ +++++++||++++|+|+++++.|.+||++
T Consensus 272 vLii~G~~D~~v~~~~~~~l~~~~~~--------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 272 ITLVRGGSSGFVTDQDTAELHRRATH--------FRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEEEEETTCCSSCHHHHHHHHHHCSS--------EEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCC--------CeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 99999999999999888888877765 88 99999999999999999999999999975
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=224.50 Aligned_cols=224 Identities=17% Similarity=0.190 Sum_probs=148.1
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHH---HHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL---ANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l---~~~l~~~~ 120 (325)
+++|||+||++++...|..+++.|.+ .||+|+++|+||||.|.... ..++++++++|+ .+++++++
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~--------~g~~vi~~D~~GhG~s~~~~---~~~~~~~~~~d~~~~~~~l~~~~ 84 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLES--------KGYTCHAPIYKGHGVPPEEL---VHTGPDDWWQDVMNGYEFLKNKG 84 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHH--------TTCEEEECCCTTSSSCHHHH---TTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHH--------CCCEEEecccCCCCCCHHHh---cCCCHHHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999986 79999999999999775432 357888877665 45677888
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
++ +++|+||||||.+|+.+|.++| |+++|+++++.... ............ ..
T Consensus 85 ~~-~~~lvG~SmGG~ia~~~a~~~p----------v~~lvl~~~~~~~~----~~~~~~~~~~~~-------------~~ 136 (247)
T 1tqh_A 85 YE-KIAVAGLSLGGVFSLKLGYTVP----------IEGIVTMCAPMYIK----SEETMYEGVLEY-------------AR 136 (247)
T ss_dssp CC-CEEEEEETHHHHHHHHHHTTSC----------CSCEEEESCCSSCC----CHHHHHHHHHHH-------------HH
T ss_pred CC-eEEEEEeCHHHHHHHHHHHhCC----------CCeEEEEcceeecC----cchhhhHHHHHH-------------HH
Confidence 88 9999999999999999999864 68888876543211 011111100000 00
Q ss_pred HHH-hhccc-hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 201 HMM-ELGFS-KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 201 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
.+. ..... .......... ..... ........+. .+....+..++ +|+|+|+|++|..++++..+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~-----~~~~~~l~~i~--~P~Lii~G~~D~~~p~~~~~~ 203 (247)
T 1tqh_A 137 EYKKREGKSEEQIEQEMEKF-KQTPM-----KTLKALQELI-----ADVRDHLDLIY--APTFVVQARHDEMINPDSANI 203 (247)
T ss_dssp HHHHHHTCCHHHHHHHHHHH-TTSCC-----TTHHHHHHHH-----HHHHHTGGGCC--SCEEEEEETTCSSSCTTHHHH
T ss_pred HhhcccccchHHHHhhhhcc-cCCCH-----HHHHHHHHHH-----HHHHhhcccCC--CCEEEEecCCCCCCCcchHHH
Confidence 000 00000 0111111100 00000 0011111111 12233445554 899999999999999988888
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCccccccC-hHHHHHHHHHHHhcC
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN-PKGLLEIVAPRIASV 325 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~~ 325 (325)
+.+.+++. ++++++++++||++++|. |+++++.|.+||+++
T Consensus 204 ~~~~~~~~------~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 204 IYNEIESP------VKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp HHHHCCCS------SEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHHhcCCC------ceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 87776641 279999999999999985 799999999999763
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=234.62 Aligned_cols=273 Identities=17% Similarity=0.196 Sum_probs=175.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC-------------ChHHHHH---HHHhhhhccCCCCceEEEEeCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-------------NWRSFSR---NLASTLSQTSASSEWRMVLVDLR 88 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-------------~~~~~~~---~l~~~~~~~~~~~~~~vi~~D~~ 88 (325)
.+|.+++|...|+.. .+.+|+|||+||++++.. .|..+++ .|.+ +||+|+++|+|
T Consensus 28 ~~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--------~g~~vi~~D~~ 98 (366)
T 2pl5_A 28 LSPVVIAYETYGTLS-SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT--------NQYFIICSNVI 98 (366)
T ss_dssp ESSEEEEEEEEECCC-TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET--------TTCEEEEECCT
T ss_pred ccCceeeEEeccCcC-CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccc--------cccEEEEecCC
Confidence 466799999998742 234689999999999988 7888764 2322 79999999999
Q ss_pred C--CCCCCCCCCCCC----------CCCHHHHHHHHHHHHHHhCCCCCE-EEEEeChhHHHHHHHHHHccccccCCccCC
Q 020518 89 N--HGRSAEIEGLDP----------PHDIANAANDLANLVKAKGWDWPD-VVIGHSMGGKVALHFAQSCARADYGQFVAL 155 (325)
Q Consensus 89 G--~G~S~~~~~~~~----------~~~~~~~~~~l~~~l~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~ 155 (325)
| ||.|........ .++++++++|+.+++++++.+ ++ +|+||||||.+|+.+|.++|+ +
T Consensus 99 G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~--------~ 169 (366)
T 2pl5_A 99 GGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE-KLFCVAGGSMGGMQALEWSIAYPN--------S 169 (366)
T ss_dssp TCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS-SEEEEEEETHHHHHHHHHHHHSTT--------S
T ss_pred CcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCc-eEEEEEEeCccHHHHHHHHHhCcH--------h
Confidence 9 898875321101 479999999999999999998 98 899999999999999999999 9
Q ss_pred cceEEEEecCCCCCCCCCchhHHHHH-HHHhhcCCC--------CCCcHHHHHHHHH---hhccchhHHHHHhhcccCC-
Q 020518 156 PKQLWVLDSVPGKVKTENSEGEVEKV-LQTLQSLPS--------SIPSRKWLVNHMM---ELGFSKSLSEWIGTNLKKS- 222 (325)
Q Consensus 156 v~~lvli~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 222 (325)
|+++|++++...... ........ ...+...+. ..+.......... ..........++.......
T Consensus 170 v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (366)
T 2pl5_A 170 LSNCIVMASTAEHSA---MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGN 246 (366)
T ss_dssp EEEEEEESCCSBCCH---HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSC
T ss_pred hhheeEeccCccCCC---ccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhccc
Confidence 999999998754321 01111111 111111100 0011100000110 0011112222222211100
Q ss_pred -------C--------cccccccChhHHHHhhhcccCCc------ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHH
Q 020518 223 -------G--------ERETWAFNLDGAVQMFNSYREMS------YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281 (325)
Q Consensus 223 -------~--------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 281 (325)
. ...............+..+...+ ....+..++ +|+++|+|++|..++++..+.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~ 324 (366)
T 2pl5_A 247 ILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNAT--CRFLVVSYSSDWLYPPAQSREIVK 324 (366)
T ss_dssp TTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCC--SEEEEEEETTCCSSCHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCC--CCEEEEecCCCcccCHHHHHHHHH
Confidence 0 00001112222222222222211 222455555 899999999999999999988888
Q ss_pred HhhhcCCCCCCceeEEEe-cCCCccccccChHHHHHHHHHHHhc
Q 020518 282 LANRQGDGSEGKVSVHVL-PNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~-~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.++..+. +++++++ +++||++++|+|+++++.|.+||++
T Consensus 325 ~~~~~~~----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 325 SLEAADK----RVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp HHHHTTC----CEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred Hhhhccc----CeEEEEeCCCCCcchhhcChhHHHHHHHHHHcc
Confidence 8883211 1899999 8999999999999999999999975
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=227.02 Aligned_cols=227 Identities=21% Similarity=0.315 Sum_probs=143.4
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+|+|||+||++++...|..+++.|++ ++|+|+++|+||||.|..+ ..++++++++++.+++++++.+
T Consensus 16 ~~~vvllHG~~~~~~~w~~~~~~L~~--------~~~~vi~~Dl~GhG~S~~~----~~~~~~~~a~~l~~~l~~l~~~- 82 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADWQPVLSHLAR--------TQCAALTLDLPGHGTNPER----HCDNFAEAVEMIEQTVQAHVTS- 82 (264)
T ss_dssp BCEEEEECCTTCCGGGGHHHHHHHTT--------SSCEEEEECCTTCSSCC-----------CHHHHHHHHHHHTTCCT-
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHhcc--------cCceEEEecCCCCCCCCCC----CccCHHHHHHHHHHHHHHhCcC-
Confidence 48999999999999999999999985 6899999999999999874 3468999999999999999987
Q ss_pred C--EEEEEeChhHHHHHH---HHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH------HHHHhhcCCCCC
Q 020518 124 P--DVVIGHSMGGKVALH---FAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK------VLQTLQSLPSSI 192 (325)
Q Consensus 124 ~--~~lvGhS~Gg~~a~~---~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 192 (325)
+ ++|+||||||.+|+. +|.++|+ +|+++|++++.+..... ...... +...+...
T Consensus 83 ~~p~~lvGhSmGG~va~~~~~~a~~~p~--------~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---- 147 (264)
T 1r3d_A 83 EVPVILVGYSLGGRLIMHGLAQGAFSRL--------NLRGAIIEGGHFGLQEN---EEKAARWQHDQQWAQRFSQQ---- 147 (264)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTTTTS--------EEEEEEEESCCCCCCSH---HHHHHHHHHHHHHHHHHHHS----
T ss_pred CCceEEEEECHhHHHHHHHHHHHhhCcc--------ccceEEEecCCCCCCCh---hhhhhhhcccHHHHHHhccc----
Confidence 6 999999999999999 8889999 99999999875432211 000000 00000000
Q ss_pred CcHHHHHHHHHhh----ccchhH-HHHHhhcccCCCcccccccChhHHHHhhhc---ccCCcccccccCCCCCCcEEEEe
Q 020518 193 PSRKWLVNHMMEL----GFSKSL-SEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 193 ~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
........+... ...... ..+.... .. .........+.. ....+....+..++ +|+++|+
T Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~ 215 (264)
T 1r3d_A 148 -PIEHVLSDWYQQAVFSSLNHEQRQTLIAQR-SA--------NLGSSVAHMLLATSLAKQPYLLPALQALK--LPIHYVC 215 (264)
T ss_dssp -CHHHHHHHHTTSGGGTTCCHHHHHHHHHHH-TT--------SCHHHHHHHHHHTCGGGCCCCHHHHHTCS--SCEEEEE
T ss_pred -cHHHHHHHHhhhhhhhccCHHHHHHHHHHH-hh--------cchHHHHHHHHhhhhccCccHHHHHHhcC--CCEEEEE
Confidence 000000000000 000000 0010000 00 001111111111 11123334455555 8999999
Q ss_pred eCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 265 AEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 265 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|++|..+ ..+.+... +++++++++||++++|+|+++++.|.+||++
T Consensus 216 G~~D~~~-----~~~~~~~~---------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 261 (264)
T 1r3d_A 216 GEQDSKF-----QQLAESSG---------LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHS 261 (264)
T ss_dssp ETTCHHH-----HHHHHHHC---------SEEEEETTCCSCHHHHCHHHHHHHHHHHHHH
T ss_pred ECCCchH-----HHHHHHhC---------CcEEEcCCCCCchhhcCHHHHHHHHHHHHHH
Confidence 9999643 12222222 5789999999999999999999999999975
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=228.43 Aligned_cols=252 Identities=24% Similarity=0.329 Sum_probs=153.6
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCC--ceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASS--EWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+++|...|. ++|+|||+||++++...|..+++.|+ + +|+|+++|+||||.|..+.. ..+++
T Consensus 27 ~~~~~~~~g~-----~~p~lvllHG~~~~~~~w~~~~~~L~---------~~~~~~via~Dl~GhG~S~~~~~--~~~~~ 90 (316)
T 3c5v_A 27 DTFRVYKSGS-----EGPVLLLLHGGGHSALSWAVFTAAII---------SRVQCRIVALDLRSHGETKVKNP--EDLSA 90 (316)
T ss_dssp EEEEEEEECS-----SSCEEEEECCTTCCGGGGHHHHHHHH---------TTBCCEEEEECCTTSTTCBCSCT--TCCCH
T ss_pred EEEEEEecCC-----CCcEEEEECCCCcccccHHHHHHHHh---------hcCCeEEEEecCCCCCCCCCCCc--cccCH
Confidence 3688887764 36899999999999999999999998 5 89999999999999987643 56899
Q ss_pred HHHHHHHHHHHHHh--CC-CCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 106 ANAANDLANLVKAK--GW-DWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 106 ~~~~~~l~~~l~~~--~~-~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+++++|+.++++++ +. + +++|+||||||.+|+.+|.++ | .|+++|++++.+.. .......
T Consensus 91 ~~~a~dl~~~l~~l~~~~~~-~~~lvGhSmGG~ia~~~A~~~~~p---------~v~~lvl~~~~~~~-----~~~~~~~ 155 (316)
T 3c5v_A 91 ETMAKDVGNVVEAMYGDLPP-PIMLIGHSMGGAIAVHTASSNLVP---------SLLGLCMIDVVEGT-----AMDALNS 155 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-CEEEEEETHHHHHHHHHHHTTCCT---------TEEEEEEESCCHHH-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCC-CeEEEEECHHHHHHHHHHhhccCC---------CcceEEEEcccccc-----hhhhHHH
Confidence 99999999999999 66 5 899999999999999999963 4 49999999864210 0000001
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhhcc-chh------HHHHHhhccc-------CCCcccccccChhHHHHhhhcccCCc
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMELGF-SKS------LSEWIGTNLK-------KSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
....+...................... ... ....+..... .......+............... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 234 (316)
T 3c5v_A 156 MQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWF-RG 234 (316)
T ss_dssp HHHHHHHSCSCBSSHHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHH-TT
T ss_pred HHHHHhhCccccccHHHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhh-hh
Confidence 111111111111111111111111000 000 0011100000 00000011111111000000000 00
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+..++ +|+|+|+|++|...+... .....+. +++++++++||++++|+|++|++.|.+||..
T Consensus 235 ~~~~~~~i~--~P~Lli~g~~D~~~~~~~---~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 299 (316)
T 3c5v_A 235 LSNLFLSCP--IPKLLLLAGVDRLDKDLT---IGQMQGK--------FQMQVLPQCGHAVHEDAPDKVAEAVATFLIR 299 (316)
T ss_dssp HHHHHHHSS--SCEEEEESSCCCCCHHHH---HHHHTTC--------SEEEECCCCSSCHHHHSHHHHHHHHHHHHHH
T ss_pred hHHHhhcCC--CCEEEEEecccccccHHH---HHhhCCc--------eeEEEcCCCCCcccccCHHHHHHHHHHHHHh
Confidence 111222343 899999999997643222 2223333 8999999999999999999999999999964
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=230.97 Aligned_cols=256 Identities=16% Similarity=0.188 Sum_probs=167.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~ 104 (325)
+|.+++|...|+ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+... ...++
T Consensus 16 ~g~~l~~~~~g~------~~~vv~lHG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (297)
T 2qvb_A 16 AGKRMAYIDEGK------GDAIVFQHGNPTSSYLWRNIMPHLE---------GLGRLVACDLIGMGASDKLSPSGPDRYS 80 (297)
T ss_dssp TTEEEEEEEESS------SSEEEEECCTTCCGGGGTTTGGGGT---------TSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred CCEEEEEEecCC------CCeEEEECCCCchHHHHHHHHHHHh---------hcCeEEEEcCCCCCCCCCCCCccccCcC
Confidence 678999999875 6899999999999999999888777 5699999999999999876420 02289
Q ss_pred HHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 105 IANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
++++++|+.+++++++. + +++++||||||.+++.+|.++|+ +|+++|++++...................
T Consensus 81 ~~~~~~~~~~~l~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 151 (297)
T 2qvb_A 81 YGEQRDFLFALWDALDLGD-HVVLVLHDWGSALGFDWANQHRD--------RVQGIAFMEAIVTPMTWADWPPAVRGVFQ 151 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCS-CEEEEEEEHHHHHHHHHHHHSGG--------GEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCC-ceEEEEeCchHHHHHHHHHhChH--------hhheeeEeccccCCccCCCCChHHHHHHH
Confidence 99999999999999999 7 99999999999999999999999 99999999987542211111111222222
Q ss_pred HhhcCCCC--CCcHHHHHHHHHh----hccch-hHHHHHhhcccCCCcccccccChhHHHHhhhccc-----------CC
Q 020518 184 TLQSLPSS--IPSRKWLVNHMME----LGFSK-SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR-----------EM 245 (325)
Q Consensus 184 ~~~~~~~~--~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 245 (325)
.+...... ..........+.. ..... ....+... ..... .........+.... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2qvb_A 152 GFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRP-FVNGG------EDRRPTLSWPRNLPIDGEPAEVVALVN 224 (297)
T ss_dssp HHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGG-GCSSS------GGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred HHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHH-hcCcc------cchhhHHHHHHhccccCCchhhHHHHH
Confidence 22110000 0000001111111 00111 11111111 10000 00111111111110 01
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+....+..++ +|+++|+|++|..++++..+.+.+.++ + +++++ ++||++++|+|+++++.|.+||++
T Consensus 225 ~~~~~l~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~--------~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~ 291 (297)
T 2qvb_A 225 EYRSWLEETD--MPKLFINAEPGAIITGRIRDYVRSWPN--------Q-TEITV-PGVHFVQEDSPEEIGAAIAQFVRR 291 (297)
T ss_dssp HHHHHHHHCC--SCEEEEEEEECSSSCHHHHHHHHTSSS--------E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHH
T ss_pred HHHhhccccc--ccEEEEecCCCCcCCHHHHHHHHHHcC--------C-eEEEe-cCccchhhhCHHHHHHHHHHHHHH
Confidence 1223344444 899999999999999887766655443 4 78888 899999999999999999999975
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=238.95 Aligned_cols=268 Identities=13% Similarity=0.142 Sum_probs=167.5
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCC-------------hHHHH---HHHHhhhhccCCCCceEEEEeCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-------------WRSFS---RNLASTLSQTSASSEWRMVLVDLRNH 90 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-------------~~~~~---~~l~~~~~~~~~~~~~~vi~~D~~G~ 90 (325)
+.+|+|..+|.... ..+|+|||+||+++++.. |..++ ..|.. ++|+|+++|+|||
T Consensus 26 ~~~i~y~~~g~~~~-~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~--------~~~~vi~~D~~G~ 96 (377)
T 3i1i_A 26 PVQMGYETYGTLNR-ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDT--------NQYFVICTDNLCN 96 (377)
T ss_dssp EEEEEEEEESCCCT-TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEET--------TTCEEEEECCTTC
T ss_pred eeeEEEEeecccCC-CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCcccc--------ccEEEEEeccccc
Confidence 67889999986432 346899999999999877 87776 45544 7999999999999
Q ss_pred CCCC-------CCCCC-----------CCCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCC
Q 020518 91 GRSA-------EIEGL-----------DPPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQ 151 (325)
Q Consensus 91 G~S~-------~~~~~-----------~~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~ 151 (325)
|.|. .+... ...++++++++|+.+++++++.+ +++ |+||||||.+|+.+|.++|+
T Consensus 97 G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~ilvGhS~Gg~ia~~~a~~~p~----- 170 (377)
T 3i1i_A 97 VQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIA-RLHAVMGPSAGGMIAQQWAVHYPH----- 170 (377)
T ss_dssp SCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCC-CBSEEEEETHHHHHHHHHHHHCTT-----
T ss_pred ccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCC-cEeeEEeeCHhHHHHHHHHHHChH-----
Confidence 8744 11100 01579999999999999999999 885 99999999999999999999
Q ss_pred ccCCcceEEE-EecCCCCCCCCCchhHHHHHHHHhhcCC-------C-CCCcHH-HHHHHHHh-hc-cchh---------
Q 020518 152 FVALPKQLWV-LDSVPGKVKTENSEGEVEKVLQTLQSLP-------S-SIPSRK-WLVNHMME-LG-FSKS--------- 210 (325)
Q Consensus 152 ~~~~v~~lvl-i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~-~~~~~~~~-~~-~~~~--------- 210 (325)
+|+++|+ +++.+...... ..........+...+ . ..+... ........ .. ....
T Consensus 171 ---~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (377)
T 3i1i_A 171 ---MVERMIGVITNPQNPIITS--VNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNS 245 (377)
T ss_dssp ---TBSEEEEESCCSBCCHHHH--HHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCS
T ss_pred ---HHHHhcccCcCCCcCCchh--hHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhh
Confidence 9999999 66554311000 000000000000000 0 000000 00000000 00 0000
Q ss_pred --------------HHHHHhhcccCCCcccccccChhHHHHhhhcccC-------CcccccccCCCCCCcEEEEeeCCCC
Q 020518 211 --------------LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE-------MSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 211 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
...++..... ..........+......... .+....+.+++ +|+++|+|++|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvlii~G~~D~ 319 (377)
T 3i1i_A 246 IEVEPYEKVSSLTSFEKEINKLTY----RSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVE--ANVLMIPCKQDL 319 (377)
T ss_dssp SCCGGGTCTTCCCHHHHHHHHHHH----HTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCC--SEEEEECBTTCS
T ss_pred ccccccccccchhHHHHHHHHHHh----hhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCC--CCEEEEecCCcc
Confidence 1111110000 00011111222222211111 12234556665 899999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++++..+.+.+.+...+ ++++++++++ +||++++|+|+++++.|.+||++
T Consensus 320 ~~~~~~~~~~~~~~~~~g----~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 371 (377)
T 3i1i_A 320 LQPSRYNYKMVDLLQKQG----KYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNR 371 (377)
T ss_dssp SSCTHHHHHHHHHHHHTT----CCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHHhcC----CCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHh
Confidence 999998888888873211 1299999998 99999999999999999999975
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=229.29 Aligned_cols=257 Identities=14% Similarity=0.182 Sum_probs=167.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-CCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-LDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~ 103 (325)
.+|.+++|...|+ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+.. ....+
T Consensus 16 ~~g~~l~~~~~g~------~~~vv~lHG~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~~~~~~~~~ 80 (302)
T 1mj5_A 16 IKGRRMAYIDEGT------GDPILFQHGNPTSSYLWRNIMPHCA---------GLGRLIACDLIGMGDSDKLDPSGPERY 80 (302)
T ss_dssp ETTEEEEEEEESC------SSEEEEECCTTCCGGGGTTTGGGGT---------TSSEEEEECCTTSTTSCCCSSCSTTSS
T ss_pred ECCEEEEEEEcCC------CCEEEEECCCCCchhhhHHHHHHhc---------cCCeEEEEcCCCCCCCCCCCCCCcccc
Confidence 3678999999875 6899999999999999999888887 568999999999999987642 01238
Q ss_pred CHHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 104 DIANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
+++++++++.+++++++. + +++++||||||.+++.+|.++|+ +|+++|++++..................
T Consensus 81 ~~~~~~~~~~~~l~~l~~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 151 (302)
T 1mj5_A 81 AYAEHRDYLDALWEALDLGD-RVVLVVHDWGSALGFDWARRHRE--------RVQGIAYMEAIAMPIEWADFPEQDRDLF 151 (302)
T ss_dssp CHHHHHHHHHHHHHHTTCTT-CEEEEEEHHHHHHHHHHHHHTGG--------GEEEEEEEEECCSCBCGGGSCGGGHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCc-eEEEEEECCccHHHHHHHHHCHH--------HHhheeeecccCCchhhhhhhHHHHHHH
Confidence 999999999999999998 7 99999999999999999999999 9999999998754221111111112222
Q ss_pred HHhhcCCC--CCCcHHHHHHHHHhh----ccchh-HHHHHhhcccCCCcccccccChhHHHHhhhccc-----------C
Q 020518 183 QTLQSLPS--SIPSRKWLVNHMMEL----GFSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR-----------E 244 (325)
Q Consensus 183 ~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 244 (325)
..+..... .......+...+... ..... ...+... ..... .........+.... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T 1mj5_A 152 QAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREP-FLAAG------EARRPTLSWPRQIPIAGTPADVVAIA 224 (302)
T ss_dssp HHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGG-GCSSS------GGGHHHHHTGGGSCBTTBSHHHHHHH
T ss_pred HHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHH-hhccc------ccccchHHHHHhccccccchhhHHHH
Confidence 22211000 000000111111110 11111 1111111 10000 00111111111110 0
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+....+..++ +|+++|+|++|..++++..+.+.+.++ + +++++ ++||++++|+|+++++.|.+|++.
T Consensus 225 ~~~~~~l~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~--------~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 292 (302)
T 1mj5_A 225 RDYAGWLSESP--IPKLFINAEPGALTTGRMRDFCRTWPN--------Q-TEITV-AGAHFIQEDSPDEIGAAIAAFVRR 292 (302)
T ss_dssp HHHHHHHTTCC--SCEEEEEEEECSSSSHHHHHHHTTCSS--------E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccC--CCeEEEEeCCCCCCChHHHHHHHHhcC--------C-ceEEe-cCcCcccccCHHHHHHHHHHHHHh
Confidence 11233445554 899999999999999877665544332 4 78888 899999999999999999999974
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=240.34 Aligned_cols=248 Identities=14% Similarity=0.157 Sum_probs=172.3
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|. +|+|||+||++++...|..+++.|.+ .||+|+++|+||||.|..+. ..++
T Consensus 11 ~dG~~l~y~~~G~------gp~VV~lHG~~~~~~~~~~l~~~La~--------~Gy~Vi~~D~rG~G~S~~~~---~~~s 73 (456)
T 3vdx_A 11 STSIDLYYEDHGT------GVPVVLIHGFPLSGHSWERQSAALLD--------AGYRVITYDRRGFGQSSQPT---TGYD 73 (456)
T ss_dssp TEEEEEEEEEESS------SEEEEEECCTTCCGGGGTTHHHHHHH--------HTEEEEEECCTTSTTSCCCS---SCCS
T ss_pred cCCeEEEEEEeCC------CCEEEEECCCCCcHHHHHHHHHHHHH--------CCcEEEEECCCCCCCCCCCC---CCCC
Confidence 4688999999874 78999999999999999999999976 79999999999999998876 5789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC------C-chh
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE------N-SEG 176 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~------~-~~~ 176 (325)
++++++|+.++++.++.+ +++++||||||.+++.+|+++ |+ +|+++|++++........ . ...
T Consensus 74 ~~~~a~dl~~~l~~l~~~-~v~LvGhS~GG~ia~~~aa~~~p~--------~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 144 (456)
T 3vdx_A 74 YDTFAADLNTVLETLDLQ-DAVLVGFSMGTGEVARYVSSYGTA--------RIAAVAFLASLEPFLLKTDDNPDGAAPQE 144 (456)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEEEGGGGHHHHHHHHHHCSS--------SEEEEEEESCCCSCCBCCSSCCSCSBCHH
T ss_pred HHHHHHHHHHHHHHhCCC-CeEEEEECHHHHHHHHHHHhcchh--------heeEEEEeCCcccccccccccccccchHH
Confidence 999999999999999999 999999999999999999988 88 999999999875432111 0 111
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhhc----------cchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCC
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMELG----------FSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM 245 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (325)
........+.. ........+.... .... ...+...... ............+ ..
T Consensus 145 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~ 208 (456)
T 3vdx_A 145 FFDGIVAAVKA------DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS---------GGFFAAAAAPTTW-YT 208 (456)
T ss_dssp HHHHHHHHHHH------CHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHT---------SCTTHHHHGGGGT-TC
T ss_pred HHHHHHHhhhc------cchHHHHHHHHHHhcccccccccccHHHHHHHhhhccc---------cchhhhhhhhhhh-hh
Confidence 11111111110 0000000000000 0000 0000000000 0011111111111 22
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+....+..++ +|+++|+|++|..++++ ..+.+.+..++ +++++++++||+++.++|+++++.|.+||++
T Consensus 209 d~~~~l~~i~--~PvLiI~G~~D~~vp~~~~~~~l~~~~~~--------~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~ 278 (456)
T 3vdx_A 209 DFRADIPRID--VPALILHGTGDRTLPIENTARVFHKALPS--------AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 278 (456)
T ss_dssp CCTTTSTTCC--SCCEEEEETTCSSSCGGGTHHHHHHHCTT--------SEEEEETTCCSCTTTTTHHHHHHHHHHHHHH
T ss_pred hHHHHhhhCC--CCEEEEEeCCCCCcCHHHHHHHHHHHCCC--------ceEEEeCCCCCcchhhCHHHHHHHHHHHHHH
Confidence 3344455554 89999999999999987 66666666655 8999999999999999999999999999974
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=224.55 Aligned_cols=267 Identities=16% Similarity=0.151 Sum_probs=159.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|++ ++++|||+||++++...+ .+...+.. ++|+|+++|+||||.|..+... ..++
T Consensus 22 ~~g~~l~~~~~g~~----~g~~vvllHG~~~~~~~~-~~~~~~~~--------~~~~vi~~D~~G~G~S~~~~~~-~~~~ 87 (317)
T 1wm1_A 22 GDGHRIYWELSGNP----NGKPAVFIHGGPGGGISP-HHRQLFDP--------ERYKVLLFDQRGCGRSRPHASL-DNNT 87 (317)
T ss_dssp SSSCEEEEEEEECT----TSEEEEEECCTTTCCCCG-GGGGGSCT--------TTEEEEEECCTTSTTCBSTTCC-TTCS
T ss_pred CCCcEEEEEEcCCC----CCCcEEEECCCCCcccch-hhhhhccc--------cCCeEEEECCCCCCCCCCCccc-cccc
Confidence 46889999998863 467899999998765332 22222322 6899999999999999865321 3678
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC------CchhHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE------NSEGEV 178 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~------~~~~~~ 178 (325)
++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++........ ......
T Consensus 88 ~~~~~~dl~~l~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 158 (317)
T 1wm1_A 88 TWHLVADIERLREMAGVE-QWLVFGGSWGSTLALAYAQTHPE--------RVSEMVLRGIFTLRKQRLHWYYQDGASRFF 158 (317)
T ss_dssp HHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCCCHHHHHHHHTSSGGGTS
T ss_pred HHHHHHHHHHHHHHcCCC-cEEEEEeCHHHHHHHHHHHHCCh--------heeeeeEeccCCCchhhhhHHhhccchhhc
Confidence 999999999999999999 99999999999999999999999 999999998654211000 000000
Q ss_pred HHHHHHhh-cCCCCCC-c-HHHHHHHHHhhccc------hhHHHHHhhcccCCCccccccc-Chh---HHHHh----h--
Q 020518 179 EKVLQTLQ-SLPSSIP-S-RKWLVNHMMELGFS------KSLSEWIGTNLKKSGERETWAF-NLD---GAVQM----F-- 239 (325)
Q Consensus 179 ~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~----~-- 239 (325)
......+. ....... . ...+...+...... .....+...............+ ... ..... +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T 1wm1_A 159 PEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTH 238 (317)
T ss_dssp HHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhc
Confidence 00001111 1110000 0 00011111000000 0000111100000000000000 000 00000 0
Q ss_pred hcccC-Cc-ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHH
Q 020518 240 NSYRE-MS-YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLE 316 (325)
Q Consensus 240 ~~~~~-~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~ 316 (325)
..+.. .. ....+.++. ++|+++|+|++|..+++...+.+.+.+++ +++++++++||+++.+ .++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~i~-~~P~lii~G~~D~~~~~~~~~~l~~~~p~--------~~~~~i~~~gH~~~~~~~~~~~~~ 309 (317)
T 1wm1_A 239 LGFLESDDQLLRNVPLIR-HIPAVIVHGRYDMACQVQNAWDLAKAWPE--------AELHIVEGAGHSYDEPGILHQLMI 309 (317)
T ss_dssp GGGCSSTTHHHHTGGGGT-TSCEEEEEETTCSSSCHHHHHHHHHHCTT--------SEEEEETTCCSSTTSHHHHHHHHH
T ss_pred ccccccchhhHhhccccc-CCCEEEEEecCCCCCCHHHHHHHHhhCCC--------ceEEEECCCCCCCCCcchHHHHHH
Confidence 00111 11 122333332 38999999999999999888888777765 8999999999999765 6899999
Q ss_pred HHHHHHh
Q 020518 317 IVAPRIA 323 (325)
Q Consensus 317 ~i~~fl~ 323 (325)
.|.+|+.
T Consensus 310 ~i~~f~~ 316 (317)
T 1wm1_A 310 ATDRFAG 316 (317)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9999985
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=235.74 Aligned_cols=277 Identities=20% Similarity=0.217 Sum_probs=175.8
Q ss_pred ccccceEEEEcccCC-----CCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCce---EEEEeCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS-----DRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEW---RMVLVDLRNHGRSAEI 96 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~-----~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~vi~~D~~G~G~S~~~ 96 (325)
.+|.+|+|..+++.. +...+|+|||+||++++...|..++..|.+.. ...|| +|+++|+||||.|..+
T Consensus 28 ~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~----~~~G~~~~~vi~~D~~G~G~S~~~ 103 (398)
T 2y6u_A 28 TDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAAD----AEGNYAIDKVLLIDQVNHGDSAVR 103 (398)
T ss_dssp TCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCB----TTTTEEEEEEEEECCTTSHHHHHH
T ss_pred CCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhh----hhcCcceeEEEEEcCCCCCCCCCC
Confidence 478999999998753 11234799999999999999999888777310 00488 9999999999999765
Q ss_pred CCC--CCCCCHHHHHHHHHHHHHHhC----CCCC--EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 97 EGL--DPPHDIANAANDLANLVKAKG----WDWP--DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 97 ~~~--~~~~~~~~~~~~l~~~l~~~~----~~~~--~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
... ...+++.++++|+.++++.+. .+ + ++|+||||||.+++.+|.++|+ +|+++|++++....
T Consensus 104 ~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~ 174 (398)
T 2y6u_A 104 NRGRLGTNFNWIDGARDVLKIATCELGSIDSH-PALNVVIGHSMGGFQALACDVLQPN--------LFHLLILIEPVVIT 174 (398)
T ss_dssp TTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTC-SEEEEEEEETHHHHHHHHHHHHCTT--------SCSEEEEESCCCSC
T ss_pred CccccCCCCCcchHHHHHHHHHHHhccccccc-CCceEEEEEChhHHHHHHHHHhCch--------heeEEEEecccccc
Confidence 320 146899999999999999854 44 4 9999999999999999999999 99999999987543
Q ss_pred CC---------CCCchhHHHHHHHHhhc-CCCCCCcHHHHHHHHHhhc----cchh-HHHHHhhcccC------CCcccc
Q 020518 169 VK---------TENSEGEVEKVLQTLQS-LPSSIPSRKWLVNHMMELG----FSKS-LSEWIGTNLKK------SGERET 227 (325)
Q Consensus 169 ~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~------~~~~~~ 227 (325)
.. ..............+.. ..............+.... .... ...+....... ......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (398)
T 2y6u_A 175 RKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVR 254 (398)
T ss_dssp CCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEE
T ss_pred ccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceE
Confidence 11 00000000111111111 1111122222222222111 1111 11121111100 000001
Q ss_pred cccChhHHHHhhhccc--CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcc
Q 020518 228 WAFNLDGAVQMFNSYR--EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHW 305 (325)
Q Consensus 228 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 305 (325)
...........+.... ..+....+..++ +|+++|+|++|.+++++..+.+.+.+++ +++++++++||+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~~~~~~~~~l~~~~~~--------~~~~~~~~~gH~ 324 (398)
T 2y6u_A 255 TKMEQAQNLLCYMNMQTFAPFLISNVKFVR--KRTIHIVGARSNWCPPQNQLFLQKTLQN--------YHLDVIPGGSHL 324 (398)
T ss_dssp ESSCHHHHHHTTSCGGGTHHHHHHHGGGCC--SEEEEEEETTCCSSCHHHHHHHHHHCSS--------EEEEEETTCCTT
T ss_pred ecCCchhhhhhhcccccchHHHHHhccccC--CCEEEEEcCCCCCCCHHHHHHHHHhCCC--------ceEEEeCCCCcc
Confidence 1111111111111100 011223445554 8999999999999999888888777765 999999999999
Q ss_pred ccccChHHHHHHHHHHHhc
Q 020518 306 VHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 306 ~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|+|+++++.|.+||++
T Consensus 325 ~~~e~p~~~~~~i~~fl~~ 343 (398)
T 2y6u_A 325 VNVEAPDLVIERINHHIHE 343 (398)
T ss_dssp HHHHSHHHHHHHHHHHHHH
T ss_pred chhcCHHHHHHHHHHHHHH
Confidence 9999999999999999964
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=229.14 Aligned_cols=269 Identities=16% Similarity=0.205 Sum_probs=171.3
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC---------hHHHHHH---HHhhhhccCCCCceEEEEeCCCC-CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN---------WRSFSRN---LASTLSQTSASSEWRMVLVDLRN-HG 91 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---------~~~~~~~---l~~~~~~~~~~~~~~vi~~D~~G-~G 91 (325)
.+|.+++|...|+.. ...+|+|||+||++++... |..+++. |.+ +||+|+++|+|| +|
T Consensus 41 ~~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~--------~g~~vi~~D~~G~~g 111 (377)
T 2b61_A 41 LSYINVAYQTYGTLN-DEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDT--------DRYFFISSNVLGGCK 111 (377)
T ss_dssp ECSEEEEEEEESCCC-TTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEET--------TTCEEEEECCTTCSS
T ss_pred ecceeEEEEeccccc-ccCCCeEEEeCCCCCccccccccccchhhhhccCccccccc--------CCceEEEecCCCCCC
Confidence 467789999988642 1236899999999999998 8887753 633 899999999999 78
Q ss_pred CCCCCCCCC-----------CCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCCccCCcceE
Q 020518 92 RSAEIEGLD-----------PPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVALPKQL 159 (325)
Q Consensus 92 ~S~~~~~~~-----------~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l 159 (325)
.|+.+.... ..++++++++++.+++++++.+ +++ |+||||||.+|+.+|.++|+ +|+++
T Consensus 112 ~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~l 182 (377)
T 2b61_A 112 GTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS-HLKAIIGGSFGGMQANQWAIDYPD--------FMDNI 182 (377)
T ss_dssp SSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC-CEEEEEEETHHHHHHHHHHHHSTT--------SEEEE
T ss_pred CCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCc-ceeEEEEEChhHHHHHHHHHHCch--------hhhee
Confidence 887653100 1479999999999999999999 988 99999999999999999999 99999
Q ss_pred EEEecCCCCCCCCCchhHHHHH-HHHhhcCCC--------CCCcHHHH-HHHHH---hhccchhHHHHHhhcccCCC---
Q 020518 160 WVLDSVPGKVKTENSEGEVEKV-LQTLQSLPS--------SIPSRKWL-VNHMM---ELGFSKSLSEWIGTNLKKSG--- 223 (325)
Q Consensus 160 vli~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~--- 223 (325)
|++++.+.... ........ ...+...+. .......+ ...+. .......+..++........
T Consensus 183 vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T 2b61_A 183 VNLCSSIYFSA---EAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFW 259 (377)
T ss_dssp EEESCCSSCCH---HHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTT
T ss_pred EEeccCccccc---cchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccc
Confidence 99998753321 01111111 111111000 00000000 00000 00001111111111110000
Q ss_pred ----c----------ccccccChhHHHHhhhcccC-------CcccccccCCCCCCcEEEEeeCCCCCCCh----HHHHH
Q 020518 224 ----E----------RETWAFNLDGAVQMFNSYRE-------MSYWPLLEHPPQGMEIAIVRAEKSDRWDP----DVIQR 278 (325)
Q Consensus 224 ----~----------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~----~~~~~ 278 (325)
. ..............+..... .+....+..++ +|+++|+|++|.++++ +..+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvlii~G~~D~~~~~~~~~~~~~~ 337 (377)
T 2b61_A 260 GDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIK--ARYTLVSVTTDQLFKPIDLYKSKQL 337 (377)
T ss_dssp SCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCC--SEEEEEEETTCSSSCHHHHHHHHHH
T ss_pred cchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcC--CCEEEEecCCcccCCccchHHHHHH
Confidence 0 00001111222222221111 12234455555 8999999999999999 66666
Q ss_pred HHHHhhhcCCCCCCceeEEEec-CCCccccccChHHHHHHHHHHHhc
Q 020518 279 LEGLANRQGDGSEGKVSVHVLP-NAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.+..++ +++++++ ++||++++|+|+++++.|.+||++
T Consensus 338 l~~~~~~--------~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 338 LEQSGVD--------LHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHTTCE--------EEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HHhcCCC--------ceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 6666555 9999999 999999999999999999999975
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-32 Score=236.12 Aligned_cols=269 Identities=14% Similarity=0.130 Sum_probs=171.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC---hHHHHH---HHHhhhhccCCCCceEEEEeCCCC--CCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN---WRSFSR---NLASTLSQTSASSEWRMVLVDLRN--HGRSAEI 96 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~---~l~~~~~~~~~~~~~~vi~~D~~G--~G~S~~~ 96 (325)
.+|.+++|..+|+.. .+.+++|||+||++++... |..++. .|.. ++|+|+++|+|| ||.|...
T Consensus 91 ~~g~~l~y~~~G~~~-~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~--------~~~~Vi~~D~~G~~~G~S~~~ 161 (444)
T 2vat_A 91 LRDVPVAYKSWGRMN-VSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDT--------SRYFIICLNYLGSPFGSAGPC 161 (444)
T ss_dssp EEEEEEEEEEESCCC-TTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCT--------TTCEEEEECCTTCSSSSSSTT
T ss_pred ecceeEEEEEecCCC-CCCCCeEEEECCCCcccchhhHHHHhcCccchhhc--------cCCEEEEecCCCCCCCCCCCC
Confidence 366789999998742 1346899999999999998 888765 3533 799999999999 6888642
Q ss_pred CCC---C---------CCCCHHHHHHHHHHHHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 97 EGL---D---------PPHDIANAANDLANLVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 97 ~~~---~---------~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
... . ..++++++++|+.+++++++.+ + ++|+||||||++|+.+|.++|+ +|+++|+++
T Consensus 162 ~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~-~~~~lvGhSmGG~ial~~A~~~p~--------~v~~lVli~ 232 (444)
T 2vat_A 162 SPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVR-QIAAVVGASMGGMHTLEWAFFGPE--------YVRKIVPIA 232 (444)
T ss_dssp SBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCC-CEEEEEEETHHHHHHHHHGGGCTT--------TBCCEEEES
T ss_pred CCCcccccccccccccccccHHHHHHHHHHHHHhcCCc-cceEEEEECHHHHHHHHHHHhChH--------hhheEEEEe
Confidence 100 0 1379999999999999999999 8 9999999999999999999999 999999999
Q ss_pred cCCCCCCCCCchhHHHHH-HHHhhcCCC---------CCCcHHHHHHHHH---hhccchhHHHHHhhcccC---------
Q 020518 164 SVPGKVKTENSEGEVEKV-LQTLQSLPS---------SIPSRKWLVNHMM---ELGFSKSLSEWIGTNLKK--------- 221 (325)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--------- 221 (325)
+....... ...+... ...+...+. ..+........+. .......+...+......
T Consensus 233 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (444)
T 2vat_A 233 TSCRQSGW---CAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQ 309 (444)
T ss_dssp CCSBCCHH---HHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------
T ss_pred ccccCCcc---chhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCcccccccccccc
Confidence 87543210 0000000 000100000 0000000000000 000000111111100000
Q ss_pred ------------------C------------CcccccccChhHHHHhhhcccCC--------cccccccCCCCCCcEEEE
Q 020518 222 ------------------S------------GERETWAFNLDGAVQMFNSYREM--------SYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 222 ------------------~------------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~P~l~i 263 (325)
. .......+....+.......... +....+..++ +|+++|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~--~PvLvi 387 (444)
T 2vat_A 310 DAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMIT--QPALII 387 (444)
T ss_dssp -------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCC--SCEEEE
T ss_pred ccccccccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCC--CCEEEE
Confidence 0 00000011111122222221111 1334455555 899999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEec-CCCccccccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLP-NAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|++|..++++..+.+.+.+++ +++++++ ++||++++|+|+++++.|.+||++
T Consensus 388 ~G~~D~~~p~~~~~~l~~~~p~--------~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~ 441 (444)
T 2vat_A 388 CARSDGLYSFDEHVEMGRSIPN--------SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 441 (444)
T ss_dssp ECTTCSSSCHHHHHHHHHHSTT--------EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EeCCCCCCCHHHHHHHHHHCCC--------cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHH
Confidence 9999999999888888887765 9999999 899999999999999999999975
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=215.08 Aligned_cols=237 Identities=16% Similarity=0.178 Sum_probs=167.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
|.+++|...|++ +++|+|||+||++++...|. ++..|. +||+|+++|+||||.|..+ ..++++
T Consensus 2 g~~l~y~~~g~~---~~~~~vv~~hG~~~~~~~~~-~~~~l~---------~g~~v~~~d~~g~g~s~~~----~~~~~~ 64 (245)
T 3e0x_A 2 NAMLHYVHVGNK---KSPNTLLFVHGSGCNLKIFG-ELEKYL---------EDYNCILLDLKGHGESKGQ----CPSTVY 64 (245)
T ss_dssp CCCCCEEEEECT---TCSCEEEEECCTTCCGGGGT-TGGGGC---------TTSEEEEECCTTSTTCCSC----CCSSHH
T ss_pred CceeEEEecCCC---CCCCEEEEEeCCcccHHHHH-HHHHHH---------hCCEEEEecCCCCCCCCCC----CCcCHH
Confidence 568899998874 35899999999999999999 776665 7999999999999999843 578999
Q ss_pred HHHHHHHHHH------HHhCCCCCEEEEEeChhHHHHHHHHHH-ccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 107 NAANDLANLV------KAKGWDWPDVVIGHSMGGKVALHFAQS-CARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 107 ~~~~~l~~~l------~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
++++++.+++ ++++ +++++||||||.+++.+|.+ +|+ |+++|++++....... ..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~---~~~l~G~S~Gg~~a~~~a~~~~p~---------v~~lvl~~~~~~~~~~--~~---- 126 (245)
T 3e0x_A 65 GYIDNVANFITNSEVTKHQK---NITLIGYSMGGAIVLGVALKKLPN---------VRKVVSLSGGARFDKL--DK---- 126 (245)
T ss_dssp HHHHHHHHHHHHCTTTTTCS---CEEEEEETHHHHHHHHHHTTTCTT---------EEEEEEESCCSBCTTS--CH----
T ss_pred HHHHHHHHHHHhhhhHhhcC---ceEEEEeChhHHHHHHHHHHhCcc---------ccEEEEecCCCccccc--cH----
Confidence 9999999999 7766 89999999999999999999 885 9999999987544211 11
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
.....+... .... .................+... ... ........+......+....+..++ +|
T Consensus 127 ~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~P 190 (245)
T 3e0x_A 127 DFMEKIYHN---QLDN-NYLLECIGGIDNPLSEKYFET-LEK---------DPDIMINDLIACKLIDLVDNLKNID--IP 190 (245)
T ss_dssp HHHHHHHTT---CCCH-HHHHHHHTCSCSHHHHHHHTT-SCS---------SHHHHHHHHHHHHHCBCGGGGGGCC--SC
T ss_pred HHHHHHHHH---HHHh-hcCcccccccchHHHHHHHHH-Hhc---------CcHHHHHHHHHhccccHHHHHHhCC--CC
Confidence 111111111 0000 011111111111111111111 110 1222223333333334445556555 89
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
+++|+|++|..++++..+.+.+..++ +++++++++||+++.++|+++++.|.+||
T Consensus 191 ~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 191 VKAIVAKDELLTLVEYSEIIKKEVEN--------SELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHSSS--------EEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHcCC--------ceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 99999999999999888888777765 99999999999999999999999999986
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-32 Score=228.31 Aligned_cols=121 Identities=21% Similarity=0.250 Sum_probs=108.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...|+.. +++|+|||+||++++...|..++..|.+ .||+|+++|+||||.|..+... ..+++
T Consensus 11 ~g~~l~y~~~G~~~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~--------~g~~vi~~d~~g~g~s~~~~~~-~~~~~ 79 (356)
T 2e3j_A 11 RGTRIHAVADSPPD--QQGPLVVLLHGFPESWYSWRHQIPALAG--------AGYRVVAIDQRGYGRSSKYRVQ-KAYRI 79 (356)
T ss_dssp TTEEEEEEEECCTT--CCSCEEEEECCTTCCGGGGTTTHHHHHH--------TTCEEEEECCTTSTTSCCCCSG-GGGSH
T ss_pred CCeEEEEEEecCCC--CCCCEEEEECCCCCcHHHHHHHHHHHHH--------cCCEEEEEcCCCCCCCCCCCcc-cccCH
Confidence 67899999988631 2478999999999999999999999986 7899999999999999876421 25799
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|+++++.
T Consensus 80 ~~~~~~~~~~~~~l~~~-~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~ 131 (356)
T 2e3j_A 80 KELVGDVVGVLDSYGAE-QAFVVGHDWGAPVAWTFAWLHPD--------RCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHHHHHTTCS-CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHcCCC-CeEEEEECHhHHHHHHHHHhCcH--------hhcEEEEECCcc
Confidence 99999999999999998 99999999999999999999999 999999999765
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=245.22 Aligned_cols=259 Identities=17% Similarity=0.241 Sum_probs=171.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|. +|+|||+||++++...|..++..|.+ .||+|+++|+||||.|..+... ..++
T Consensus 245 ~dg~~l~~~~~g~------~p~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~D~~G~G~S~~~~~~-~~~~ 309 (555)
T 3i28_A 245 KPRVRLHFVELGS------GPAVCLCHGFPESWYSWRYQIPALAQ--------AGYRVLAMDMKGYGESSAPPEI-EEYC 309 (555)
T ss_dssp ETTEEEEEEEECS------SSEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEEECCTTSTTSCCCSCG-GGGS
T ss_pred CCCcEEEEEEcCC------CCEEEEEeCCCCchhHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCCCc-cccc
Confidence 4789999999874 78999999999999999999999997 7999999999999999886531 4688
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++++|+.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|+++++........... ......
T Consensus 310 ~~~~~~d~~~~~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~--~~~~~~ 378 (555)
T 3i28_A 310 MEVLCKEMVTFLDKLGLS-QAVFIGHDWGGMLVWYMALFYPE--------RVRAVASLNTPFIPANPNMSPL--ESIKAN 378 (555)
T ss_dssp HHHHHHHHHHHHHHHTCS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCCCCCTTSCHH--HHHHTC
T ss_pred HHHHHHHHHHHHHHcCCC-cEEEEEecHHHHHHHHHHHhChH--------heeEEEEEccCCCCCCcccchH--HHHhcC
Confidence 999999999999999999 99999999999999999999999 9999999997654332221110 000000
Q ss_pred -----hhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhccc----------------CC-C-cccccccChhHHHHhhhc
Q 020518 185 -----LQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLK----------------KS-G-ERETWAFNLDGAVQMFNS 241 (325)
Q Consensus 185 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~-~-~~~~~~~~~~~~~~~~~~ 241 (325)
....... . .............+..++..... .. . ..............+...
T Consensus 379 ~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (555)
T 3i28_A 379 PVFDYQLYFQEP--G---VAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQ 453 (555)
T ss_dssp GGGHHHHHHHST--T---HHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHH
T ss_pred CccchhHHhhCC--C---chHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHH
Confidence 0000000 0 00000000000000000000000 00 0 000000000000000000
Q ss_pred ------------ccC------CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCC
Q 020518 242 ------------YRE------MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAG 303 (325)
Q Consensus 242 ------------~~~------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 303 (325)
+.. .+....+..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++|
T Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~Pvlii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~g 523 (555)
T 3i28_A 454 FKKSGFRGPLNWYRNMERNWKWACKSLGRKIL--IPALMVTAEKDFVLVPQMSQHMEDWIPH--------LKRGHIEDCG 523 (555)
T ss_dssp HTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCC--SCEEEEEETTCSSSCGGGGTTGGGTCTT--------CEEEEETTCC
T ss_pred HhcccchhHHHHHHhccccchhhccccccccc--cCEEEEEeCCCCCcCHHHHHHHHhhCCC--------ceEEEeCCCC
Confidence 000 01122333444 8999999999999999877766665554 8999999999
Q ss_pred ccccccChHHHHHHHHHHHhc
Q 020518 304 HWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 304 H~~~~e~p~~~~~~i~~fl~~ 324 (325)
|++++|+|+++++.|.+||++
T Consensus 524 H~~~~e~p~~~~~~i~~fl~~ 544 (555)
T 3i28_A 524 HWTQMDKPTEVNQILIKWLDS 544 (555)
T ss_dssp SCHHHHSHHHHHHHHHHHHHH
T ss_pred CCcchhCHHHHHHHHHHHHHh
Confidence 999999999999999999974
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-32 Score=229.57 Aligned_cols=129 Identities=16% Similarity=0.230 Sum_probs=109.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhc-cCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ-TSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+|.+|+|...++.. +++++|||+||++++...|..+++.|.+.-.. .+...+|+|+++|+||||.|+.+.. ..+
T Consensus 75 i~g~~i~~~~~~~~~--~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~--~~~ 150 (388)
T 4i19_A 75 IDGATIHFLHVRSPE--PDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKS--AGW 150 (388)
T ss_dssp ETTEEEEEEEECCSS--TTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSS--CCC
T ss_pred ECCeEEEEEEccCCC--CCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCC--CCC
Confidence 368899999876532 35789999999999999999999999841000 0000089999999999999998764 478
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|++++++++..
T Consensus 151 ~~~~~a~~~~~l~~~lg~~-~~~l~G~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~ 204 (388)
T 4i19_A 151 ELGRIAMAWSKLMASLGYE-RYIAQGGDIGAFTSLLLGAIDPS--------HLAGIHVNLLQT 204 (388)
T ss_dssp CHHHHHHHHHHHHHHTTCS-SEEEEESTHHHHHHHHHHHHCGG--------GEEEEEESSCCC
T ss_pred CHHHHHHHHHHHHHHcCCC-cEEEEeccHHHHHHHHHHHhChh--------hceEEEEecCCC
Confidence 9999999999999999999 99999999999999999999999 999999999754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-30 Score=214.92 Aligned_cols=259 Identities=15% Similarity=0.109 Sum_probs=167.0
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
..+|.+++|..+++.. +.+|+|||+||++++...|..++..|.+ .||+|+++|+||||.|..+.. ..+
T Consensus 24 ~~~g~~l~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~--~~~ 91 (303)
T 3pe6_A 24 NADGQYLFCRYWAPTG--TPKALIFVSHGAGEHSGRYEELARMLMG--------LDLLVFAHDHVGHGQSEGERM--VVS 91 (303)
T ss_dssp CTTSCEEEEEEECCSS--CCSEEEEEECCTTCCGGGGHHHHHHHHH--------TTEEEEEECCTTSTTSCSSTT--CCS
T ss_pred cCCCeEEEEEEeccCC--CCCeEEEEECCCCchhhHHHHHHHHHHh--------CCCcEEEeCCCCCCCCCCCCC--CCC
Confidence 3478899999988652 3478999999999999999999999997 799999999999999987654 567
Q ss_pred CHHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 104 DIANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
+++++++|+.++++.+. .+ +++++||||||.+++.+|.++|+ +|+++|++++...... .......
T Consensus 92 ~~~~~~~d~~~~l~~l~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~--~~~~~~~ 160 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKDYPGL-PVFLLGHSMGGAIAILTAAERPG--------HFAGMVLISPLVLANP--ESATTFK 160 (303)
T ss_dssp STHHHHHHHHHHHHHHHHHSTTC-CEEEEEETHHHHHHHHHHHHSTT--------TCSEEEEESCSSSBCH--HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhccCCc-eEEEEEeCHHHHHHHHHHHhCcc--------cccEEEEECccccCch--hccHHHH
Confidence 89999999999988763 34 89999999999999999999999 9999999998643321 0011111
Q ss_pred HHHHHhh-cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 180 KVLQTLQ-SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 180 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
.....+. .......... ..... ..........+...... .. ............... .+....+..++ +
T Consensus 161 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~--~~~~~~~~~i~--~ 229 (303)
T 3pe6_A 161 VLAAKVLNSVLPNLSSGP-IDSSV-LSRNKTEVDIYNSDPLI-CR----AGLKVCFGIQLLNAV--SRVERALPKLT--V 229 (303)
T ss_dssp HHHHHHHHTTCCSCCCCC-CCGGG-TCSCHHHHHHHHTCTTS-CC----SCCCHHHHHHHHHHH--HHHHHHGGGCC--S
T ss_pred HHHHHHHHHhcccccCCc-cchhh-hhcchhHHHHhccCccc-cc----cchhhhhHHHHHHHH--HHHHHHhhcCC--C
Confidence 1111111 1100000000 00000 00000001111111000 00 000111111111110 01223344444 8
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
|+++|+|++|..++++..+.+.+.++. +++++++++++||+++.++|+++.+.+.+|+
T Consensus 230 P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~ 287 (303)
T 3pe6_A 230 PFLLLQGSADRLCDSKGAYLLMELAKS------QDKTLKIYEGAYHVLHKELPEVTNSVFHEIN 287 (303)
T ss_dssp CEEEEEETTCSSBCHHHHHHHHHHCCC------SSEEEEEETTCCSCGGGSCHHHHHHHHHHHH
T ss_pred CEEEEeeCCCCCCChHHHHHHHHhccc------CCceEEEeCCCccceeccchHHHHHHHHHHH
Confidence 999999999999999888888777662 1289999999999999999987776654443
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.6e-31 Score=214.56 Aligned_cols=249 Identities=12% Similarity=0.079 Sum_probs=169.4
Q ss_pred cccccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 16 TRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 16 ~~~~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
.++++.....+|.+++|..+.... +++|+|||+||++++...|.. +...|.+ .||+|+++|+||||.|
T Consensus 11 ~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s 80 (270)
T 3llc_A 11 THAITVGQGSDARSIAALVRAPAQ--DERPTCIWLGGYRSDMTGTKALEMDDLAAS--------LGVGAIRFDYSGHGAS 80 (270)
T ss_dssp EEEEEESSGGGCEEEEEEEECCSS--TTSCEEEEECCTTCCTTSHHHHHHHHHHHH--------HTCEEEEECCTTSTTC
T ss_pred cceEEEeeccCcceEEEEeccCCC--CCCCeEEEECCCccccccchHHHHHHHHHh--------CCCcEEEeccccCCCC
Confidence 344444445688999999665431 348999999999999877654 6666665 7999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH---cc---ccccCCccCCcceEEEEecCCC
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS---CA---RADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p---~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.... ..++++++++|+.++++.++.+ +++++||||||.+++.+|.+ +| + +|+++|++++.+.
T Consensus 81 ~~~~---~~~~~~~~~~d~~~~~~~l~~~-~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~--------~v~~~il~~~~~~ 148 (270)
T 3llc_A 81 GGAF---RDGTISRWLEEALAVLDHFKPE-KAILVGSSMGGWIALRLIQELKARHDNPT--------QVSGMVLIAPAPD 148 (270)
T ss_dssp CSCG---GGCCHHHHHHHHHHHHHHHCCS-EEEEEEETHHHHHHHHHHHHHHTCSCCSC--------EEEEEEEESCCTT
T ss_pred CCcc---ccccHHHHHHHHHHHHHHhccC-CeEEEEeChHHHHHHHHHHHHHhcccccc--------ccceeEEecCccc
Confidence 8765 4789999999999999999988 99999999999999999999 99 8 9999999998743
Q ss_pred CCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
...... .. . .. ......+....... ............ .............
T Consensus 149 ~~~~~~-----------~~----~-~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~----~~~~~~~~~~~~~ 198 (270)
T 3llc_A 149 FTSDLI-----------EP----L-LG-DRERAELAENGYFE---------EVSEYSPEPNIF----TRALMEDGRANRV 198 (270)
T ss_dssp HHHHTT-----------GG----G-CC-HHHHHHHHHHSEEE---------ECCTTCSSCEEE----EHHHHHHHHHTCC
T ss_pred chhhhh-----------hh----h-hh-hhhhhhhhccCccc---------ChhhcccchhHH----HHHHHhhhhhhhh
Confidence 211000 00 0 00 00001110000000 000000000011 1111111112222
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
...+..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++++||++. .+.++++.+.|.+||++
T Consensus 199 ~~~~~~~~--~P~l~i~g~~D~~v~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 199 MAGMIDTG--CPVHILQGMADPDVPYQHALKLVEHLPA------DDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp TTSCCCCC--SCEEEEEETTCSSSCHHHHHHHHHTSCS------SSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred hhhhhcCC--CCEEEEecCCCCCCCHHHHHHHHHhcCC------CCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 33444444 8999999999999999888877776654 1389999999999655 47799999999999974
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-34 Score=239.94 Aligned_cols=257 Identities=17% Similarity=0.187 Sum_probs=163.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC--CCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL--DPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~--~~~~ 103 (325)
+|.+++|...|. +|+|||+||++++...|..+++.|. +||+|+++|+||||.|..+... ...+
T Consensus 13 ~g~~~~~~~~g~------~p~vv~lHG~~~~~~~~~~~~~~l~---------~g~~v~~~D~~G~G~s~~~~~~~~~~~~ 77 (304)
T 3b12_A 13 GDVTINCVVGGS------GPALLLLHGFPQNLHMWARVAPLLA---------NEYTVVCADLRGYGGSSKPVGAPDHANY 77 (304)
Confidence 678899998773 6899999999999999999998888 7899999999999999886310 1578
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH-HH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK-VL 182 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~-~~ 182 (325)
+++++++|+.+++++++.+ +++|+||||||.+++.+|.++|+ +|+++|++++.+.............. ..
T Consensus 78 ~~~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 148 (304)
T 3b12_A 78 SFRAMASDQRELMRTLGFE-RFHLVGHARGGRTGHRMALDHPD--------SVLSLAVLDIIPTYVMFEEVDRFVARAYW 148 (304)
Confidence 9999999999999999988 99999999999999999999999 99999999987543221110000000 00
Q ss_pred H-HhhcCC----CCCC--cHHHHHHH-HHhh------ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccc
Q 020518 183 Q-TLQSLP----SSIP--SRKWLVNH-MMEL------GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYW 248 (325)
Q Consensus 183 ~-~~~~~~----~~~~--~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
. ...... .... ........ +... .......+......... .........+......+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 221 (304)
T 3b12_A 149 HWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDP-------AAIHGSCCDYRAGGTIDFE 221 (304)
Confidence 0 000000 0000 00000000 0000 00000000000000000 0000111111111111111
Q ss_pred cc----ccCCCCCCcEEEEeeCCCCCC-ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 249 PL----LEHPPQGMEIAIVRAEKSDRW-DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 249 ~~----~~~~~~~~P~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.. +..+ ++|+++|+|++|..+ ++...+.+.+..++ ++++++ ++||++++|+|+++++.|.+||+
T Consensus 222 ~~~~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~ 290 (304)
T 3b12_A 222 LDHGDLGRQV--QCPALVFSGSAGLMHSLFEMQVVWAPRLAN--------MRFASL-PGGHFFVDRFPDDTARILREFLS 290 (304)
Confidence 11 3444 489999999999655 44556666666655 888889 99999999999999999999997
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 291 ~ 291 (304)
T 3b12_A 291 D 291 (304)
Confidence 5
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=9e-31 Score=218.38 Aligned_cols=119 Identities=27% Similarity=0.324 Sum_probs=98.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|...|++ ++++|||+||++++...+ .+...+.. ++|+|+++|+||||.|..+... ..++
T Consensus 19 ~~g~~l~y~~~G~~----~g~pvvllHG~~~~~~~~-~~~~~~~~--------~~~~vi~~D~~G~G~S~~~~~~-~~~~ 84 (313)
T 1azw_A 19 DDRHTLYFEQCGNP----HGKPVVMLHGGPGGGCND-KMRRFHDP--------AKYRIVLFDQRGSGRSTPHADL-VDNT 84 (313)
T ss_dssp SSSCEEEEEEEECT----TSEEEEEECSTTTTCCCG-GGGGGSCT--------TTEEEEEECCTTSTTSBSTTCC-TTCC
T ss_pred CCCCEEEEEecCCC----CCCeEEEECCCCCccccH-HHHHhcCc--------CcceEEEECCCCCcCCCCCccc-cccc
Confidence 36889999998862 467899999998765332 22222322 6899999999999999865321 3679
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++++++|+.+++++++++ +++|+||||||.+|+.+|.++|+ +|+++|++++..
T Consensus 85 ~~~~~~dl~~l~~~l~~~-~~~lvGhSmGg~ia~~~a~~~p~--------~v~~lvl~~~~~ 137 (313)
T 1azw_A 85 TWDLVADIERLRTHLGVD-RWQVFGGSWGSTLALAYAQTHPQ--------QVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHHhCCC-ceEEEEECHHHHHHHHHHHhChh--------heeEEEEecccc
Confidence 999999999999999999 99999999999999999999999 999999998753
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-29 Score=213.05 Aligned_cols=256 Identities=16% Similarity=0.100 Sum_probs=167.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+|.|..+++.. +.+|+|||+||++++...|..++..|.+ .||+|+++|+||||.|..+.. ..++
T Consensus 43 ~dg~~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~--~~~~ 110 (342)
T 3hju_A 43 ADGQYLFCRYWKPTG--TPKALIFVSHGAGEHSGRYEELARMLMG--------LDLLVFAHDHVGHGQSEGERM--VVSD 110 (342)
T ss_dssp TTSCEEEEEEECCSS--CCSEEEEEECCTTCCGGGGHHHHHHHHT--------TTEEEEEECCTTSTTSCSSTT--CCSC
T ss_pred cCCeEEEEEEeCCCC--CCCcEEEEECCCCcccchHHHHHHHHHh--------CCCeEEEEcCCCCcCCCCcCC--CcCc
Confidence 478899999987642 3578899999999999999999999986 699999999999999997654 5678
Q ss_pred HHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch--hHH
Q 020518 105 IANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE--GEV 178 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~--~~~ 178 (325)
++++++|+.++++.+. .+ +++|+||||||.+++.+|.++|+ +|+++|++++........... ...
T Consensus 111 ~~~~~~d~~~~l~~l~~~~~~~-~v~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~ 181 (342)
T 3hju_A 111 FHVFVRDVLQHVDSMQKDYPGL-PVFLLGHSMGGAIAILTAAERPG--------HFAGMVLISPLVLANPESATTFKVLA 181 (342)
T ss_dssp THHHHHHHHHHHHHHHHHSTTC-CEEEEEETHHHHHHHHHHHHSTT--------TCSEEEEESCCCSCCTTTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCC-cEEEEEeChHHHHHHHHHHhCcc--------ccceEEEECcccccchhhhhHHHHHH
Confidence 9999999999988763 34 89999999999999999999999 999999999875443221111 001
Q ss_pred HHHHHHhhcCCC-CCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 179 EKVLQTLQSLPS-SIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 179 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
......+..... ...... . ..........+....... .. .............. .+....+..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~--~~~~~~~~~i~-- 246 (342)
T 3hju_A 182 AKVLNLVLPNLSLGPIDSS-----V-LSRNKTEVDIYNSDPLIC-RA----GLKVCFGIQLLNAV--SRVERALPKLT-- 246 (342)
T ss_dssp HHHHHHHCTTCBCCCCCGG-----G-SCSCHHHHHHHHTCTTCC-CS----CCBHHHHHHHHHHH--HHHHHHGGGCC--
T ss_pred HHHHHHhccccccCccccc-----c-cccchHHHHHHhcCcccc-cc----cccHHHHHHHHHHH--HHHHHHHHhCC--
Confidence 111111111000 000000 0 000000111111111100 00 00111111111110 11123344444
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
+|+++|+|++|..++++..+.+.+.++. +++++++++++||+++.++|+++++.+.+|+
T Consensus 247 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~ 305 (342)
T 3hju_A 247 VPFLLLQGSADRLCDSKGAYLLMELAKS------QDKTLKIYEGAYHVLHKELPEVTNSVFHEIN 305 (342)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHCCC------SSEEEEEETTCCSCGGGSCHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCcccChHHHHHHHHHcCC------CCceEEEECCCCchhhcCChHHHHHHHHHHH
Confidence 8999999999999999888888777663 1289999999999999999987777644443
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=215.21 Aligned_cols=232 Identities=14% Similarity=0.180 Sum_probs=167.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCC--CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS--GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|.+++|..+++.. +++|+|||+||++++ ...|..++..|.+ .||.|+++|+||||.|..+. ..
T Consensus 29 ~~g~~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~G~G~s~~~~---~~ 95 (270)
T 3pfb_A 29 RDGLQLVGTREEPFG--EIYDMAIIFHGFTANRNTSLLREIANSLRD--------ENIASVRFDFNGHGDSDGKF---EN 95 (270)
T ss_dssp ETTEEEEEEEEECSS--SSEEEEEEECCTTCCTTCHHHHHHHHHHHH--------TTCEEEEECCTTSTTSSSCG---GG
T ss_pred cCCEEEEEEEEcCCC--CCCCEEEEEcCCCCCccccHHHHHHHHHHh--------CCcEEEEEccccccCCCCCC---Cc
Confidence 378899999998642 347899999999988 4558889999987 89999999999999998765 57
Q ss_pred CCHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 103 HDIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++.++++|+.++++.+ +.+ +++|+||||||.+++.+|.++|+ +|+++|++++.....
T Consensus 96 ~~~~~~~~d~~~~i~~l~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~--------~v~~~v~~~~~~~~~--------- 157 (270)
T 3pfb_A 96 MTVLNEIEDANAILNYVKTDPHVR-NIYLVGHAQGGVVASMLAGLYPD--------LIKKVVLLAPAATLK--------- 157 (270)
T ss_dssp CCHHHHHHHHHHHHHHHHTCTTEE-EEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCTHHH---------
T ss_pred cCHHHHHHhHHHHHHHHHhCcCCC-eEEEEEeCchhHHHHHHHHhCch--------hhcEEEEeccccccc---------
Confidence 89999999999999988 667 99999999999999999999999 999999999764211
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
.......... ..... ........ . ................+....+..++ +
T Consensus 158 ~~~~~~~~~~----------------~~~~~---~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 208 (270)
T 3pfb_A 158 GDALEGNTQG----------------VTYNP---DHIPDRLP----F----KDLTLGGFYLRIAQQLPIYEVSAQFT--K 208 (270)
T ss_dssp HHHHHTEETT----------------EECCT---TSCCSEEE----E----TTEEEEHHHHHHHHHCCHHHHHTTCC--S
T ss_pred hhhhhhhhhc----------------cccCc---cccccccc----c----cccccchhHhhcccccCHHHHHhhCC--c
Confidence 0000000000 00000 00000000 0 00000001111111223333445554 8
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+++|+|++|..++++..+.+.+..++ +++++++++||+++.++|+++++.|.+||++
T Consensus 209 P~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 266 (270)
T 3pfb_A 209 PVCLIHGTDDTVVSPNASKKYDQIYQN--------STLHLIEGADHCFSDSYQKNAVNLTTDFLQN 266 (270)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHHHCSS--------EEEEEETTCCTTCCTHHHHHHHHHHHHHHC-
T ss_pred cEEEEEcCCCCCCCHHHHHHHHHhCCC--------CeEEEcCCCCcccCccchHHHHHHHHHHHhh
Confidence 999999999999999888887777655 9999999999999999999999999999975
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=214.57 Aligned_cols=232 Identities=13% Similarity=0.098 Sum_probs=146.4
Q ss_pred ccccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~~ 102 (325)
.+|.+++|..+++... .+.+|+|||+||++++...|..+++.|++ .||+|+++|+||| |.|+.+. ..
T Consensus 15 ~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~--------~G~~Vi~~D~rGh~G~S~~~~---~~ 83 (305)
T 1tht_A 15 NNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST--------NGFHVFRYDSLHHVGLSSGSI---DE 83 (305)
T ss_dssp TTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHT--------TTCCEEEECCCBCC-----------C
T ss_pred CCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHHH--------CCCEEEEeeCCCCCCCCCCcc---cc
Confidence 4678999998876422 13578999999999999999999999986 7899999999999 9998754 46
Q ss_pred CCHHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 103 HDIANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
++++++++|+.++++.+ +.+ +++|+||||||.+|+.+|.+ | +|+++|++++.... .
T Consensus 84 ~~~~~~~~D~~~~~~~l~~~~~~-~~~lvGhSmGG~iA~~~A~~-~---------~v~~lvl~~~~~~~----------~ 142 (305)
T 1tht_A 84 FTMTTGKNSLCTVYHWLQTKGTQ-NIGLIAASLSARVAYEVISD-L---------ELSFLITAVGVVNL----------R 142 (305)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHTTT-S---------CCSEEEEESCCSCH----------H
T ss_pred eehHHHHHHHHHHHHHHHhCCCC-ceEEEEECHHHHHHHHHhCc-c---------CcCEEEEecCchhH----------H
Confidence 89999999988888765 778 99999999999999999988 4 48999998764210 1
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHH-HHhhhc-ccC-CcccccccCCCC
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGA-VQMFNS-YRE-MSYWPLLEHPPQ 256 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~ 256 (325)
................ . .+...... .........+ ...... +.. .+....+..++
T Consensus 143 ~~~~~~~~~~~~~~~~-------------~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~- 200 (305)
T 1tht_A 143 DTLEKALGFDYLSLPI-------------D----ELPNDLDF----EGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTS- 200 (305)
T ss_dssp HHHHHHHSSCGGGSCG-------------G----GCCSEEEE----TTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCC-
T ss_pred HHHHHHhhhhhhhcch-------------h----hCcccccc----cccccCHHHHHHHHHhccccchhhHHHHHhhcC-
Confidence 1111000000000000 0 00000000 0000000000 000000 000 01123345555
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 318 (325)
+|+|+|+|++|..++++..+.+.+.++. +++++++++++||.++ |+|+.+.+.+
T Consensus 201 -~PvLii~G~~D~~vp~~~~~~l~~~i~~------~~~~l~~i~~agH~~~-e~p~~~~~fl 254 (305)
T 1tht_A 201 -VPLIAFTANNDDWVKQEEVYDMLAHIRT------GHCKLYSLLGSSHDLG-ENLVVLRNFY 254 (305)
T ss_dssp -SCEEEEEETTCTTSCHHHHHHHHTTCTT------CCEEEEEETTCCSCTT-SSHHHHHHHH
T ss_pred -CCEEEEEeCCCCccCHHHHHHHHHhcCC------CCcEEEEeCCCCCchh-hCchHHHHHH
Confidence 8999999999999999888777665532 2389999999999996 8898654433
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-33 Score=229.70 Aligned_cols=245 Identities=13% Similarity=0.150 Sum_probs=154.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCC--CCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGL--LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
++..++|.. +. .+|+|||+||+ +++...|..+++.|. ++|+|+++|+||||.|+.+.. ..+
T Consensus 29 ~~~~~~~~~-~~-----~~p~vv~lHG~G~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~~~--~~~ 91 (292)
T 3l80_A 29 LLGPIYTCH-RE-----GNPCFVFLSGAGFFSTADNFANIIDKLP---------DSIGILTIDAPNSGYSPVSNQ--ANV 91 (292)
T ss_dssp TTSCEEEEE-EC-----CSSEEEEECCSSSCCHHHHTHHHHTTSC---------TTSEEEEECCTTSTTSCCCCC--TTC
T ss_pred cCceEEEec-CC-----CCCEEEEEcCCCCCcHHHHHHHHHHHHh---------hcCeEEEEcCCCCCCCCCCCc--ccc
Confidence 455777763 22 36899999955 555778888887776 799999999999999994443 579
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC----CC-CchhHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK----TE-NSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~----~~-~~~~~~ 178 (325)
+++++++|+.+++++++.+ +++|+||||||.+|+.+|.++|+ +|+++|++++...... .. .... .
T Consensus 92 ~~~~~~~~l~~~l~~~~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~-~ 161 (292)
T 3l80_A 92 GLRDWVNAILMIFEHFKFQ-SYLLCVHSIGGFAALQIMNQSSK--------ACLGFIGLEPTTVMIYRAGFSSDLYPQ-L 161 (292)
T ss_dssp CHHHHHHHHHHHHHHSCCS-EEEEEEETTHHHHHHHHHHHCSS--------EEEEEEEESCCCHHHHHHCTTSSSSHH-H
T ss_pred cHHHHHHHHHHHHHHhCCC-CeEEEEEchhHHHHHHHHHhCch--------heeeEEEECCCCcchhhhccccccchh-H
Confidence 9999999999999999999 99999999999999999999999 9999999996531110 00 0000 0
Q ss_pred HHHHHHhhcCCCCCCcHHH-HHHHHHhhccchhHH----H---HHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 179 EKVLQTLQSLPSSIPSRKW-LVNHMMELGFSKSLS----E---WIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
...+...... .... .........+..... . ........... ... ...+..+...+....
T Consensus 162 ---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~-~~~~~~~~~~~~~~~ 228 (292)
T 3l80_A 162 ---ALRRQKLKTA--ADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQS-------LPD-FKIRLALGEEDFKTG 228 (292)
T ss_dssp ---HHHHHTCCSH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTT-------STT-CCSSCCCCGGGGCCC
T ss_pred ---HHHHHHHhcc--CchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhh-------ccc-cchhhhhcchhhhhc
Confidence 1111111100 0000 111111111111100 0 00000000000 000 001111111122222
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.. ++|+++|+|++|..++++ . .+.+..++ ++ ++++++||++++|+|+++++.|.+||++
T Consensus 229 l~~---~~P~lii~g~~D~~~~~~-~-~~~~~~~~--------~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (292)
T 3l80_A 229 ISE---KIPSIVFSESFREKEYLE-S-EYLNKHTQ--------TK-LILCGQHHYLHWSETNSILEKVEQLLSN 288 (292)
T ss_dssp CCT---TSCEEEEECGGGHHHHHT-S-TTCCCCTT--------CE-EEECCSSSCHHHHCHHHHHHHHHHHHHT
T ss_pred cCC---CCCEEEEEccCccccchH-H-HHhccCCC--------ce-eeeCCCCCcchhhCHHHHHHHHHHHHHh
Confidence 332 589999999999877766 3 33333332 78 9999999999999999999999999975
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-30 Score=200.46 Aligned_cols=190 Identities=15% Similarity=0.232 Sum_probs=160.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCC---CCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRS---AEIEGLD 100 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S---~~~~~~~ 100 (325)
++.+++...+.+.+ ++|+|||+||++++...|.. ++..|.+ .||.|+++|+||+|.| ..+.
T Consensus 12 ~g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~~~~~--- 77 (207)
T 3bdi_A 12 NGTRVFQRKMVTDS---NRRSIALFHGYSFTSMDWDKADLFNNYSK--------IGYNVYAPDYPGFGRSASSEKYG--- 77 (207)
T ss_dssp TTEEEEEEEECCTT---CCEEEEEECCTTCCGGGGGGGTHHHHHHT--------TTEEEEEECCTTSTTSCCCTTTC---
T ss_pred CCcEEEEEEEeccC---CCCeEEEECCCCCCccccchHHHHHHHHh--------CCCeEEEEcCCcccccCcccCCC---
Confidence 57788844444332 47899999999999999999 9999997 7899999999999999 6554
Q ss_pred CCC-CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 101 PPH-DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 101 ~~~-~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
..+ +++++++++..++++++.+ +++++|||+||.+++.++.++|+ ++++++++++..... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~--------~~~~~v~~~~~~~~~--------~- 139 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKANGVA-RSVIMGASMGGGMVIMTTLQYPD--------IVDGIIAVAPAWVES--------L- 139 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSCGG--------G-
T ss_pred CCcchHHHHHHHHHHHHHHcCCC-ceEEEEECccHHHHHHHHHhCch--------hheEEEEeCCccccc--------h-
Confidence 456 9999999999999999988 99999999999999999999999 999999999863110 0
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
...+..++ +|
T Consensus 140 --------------------------------------------------------------------~~~~~~~~--~p 149 (207)
T 3bdi_A 140 --------------------------------------------------------------------KGDMKKIR--QK 149 (207)
T ss_dssp --------------------------------------------------------------------HHHHTTCC--SC
T ss_pred --------------------------------------------------------------------hHHHhhcc--CC
Confidence 01122333 79
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+++++|++|..++++..+.+.+..++ +++++++++||+.+.++|+++.+.|.+||+++
T Consensus 150 ~l~i~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 207 (207)
T 3bdi_A 150 TLLVWGSKDHVVPIALSKEYASIISG--------SRLEIVEGSGHPVYIEKPEEFVRITVDFLRNL 207 (207)
T ss_dssp EEEEEETTCTTTTHHHHHHHHHHSTT--------CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCccchHHHHHHHHhcCC--------ceEEEeCCCCCCccccCHHHHHHHHHHHHhhC
Confidence 99999999999999888777776654 89999999999999999999999999999864
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=210.16 Aligned_cols=225 Identities=17% Similarity=0.262 Sum_probs=154.4
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
..+++|||+||++++...|..++..|. ++|+|+++|+||||.|.... ..++++++++++.+++++++.
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~l~~~~~ 85 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFFPLAKALA---------PAVEVLAVQYPGRQDRRHEP---PVDSIGGLTNRLLEVLRPFGD 85 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGHHHHHHHT---------TTEEEEEECCTTSGGGTTSC---CCCSHHHHHHHHHHHTGGGTT
T ss_pred CCCceEEEeCCCCCCchhHHHHHHHhc---------cCcEEEEecCCCCCCCCCCC---CCcCHHHHHHHHHHHHHhcCC
Confidence 458999999999999999999999998 56999999999999998765 578999999999999999988
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCC----cceEEEEecCCCCCCCCCch--hHHHHHHHHhhcCCCCCCcH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL----PKQLWVLDSVPGKVKTENSE--GEVEKVLQTLQSLPSSIPSR 195 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~----v~~lvli~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 195 (325)
+ +++|+||||||.+|+.+|.++|+ + +++++++++........... .........+.... .
T Consensus 86 ~-~~~lvG~S~Gg~ia~~~a~~~~~--------~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 151 (267)
T 3fla_A 86 R-PLALFGHSMGAIIGYELALRMPE--------AGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLG----G- 151 (267)
T ss_dssp S-CEEEEEETHHHHHHHHHHHHTTT--------TTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTC----H-
T ss_pred C-ceEEEEeChhHHHHHHHHHhhhh--------hccccccEEEECCCCccccccchhhcccchHHHHHHHHHhc----C-
Confidence 8 99999999999999999999998 5 99999998764332211000 00011111111000 0
Q ss_pred HHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH
Q 020518 196 KWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV 275 (325)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 275 (325)
....... ........... ..........+... .. .. .++|+++|+|++|..++++.
T Consensus 152 --~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~~~~~~---~~-~~--~~~P~l~i~g~~D~~~~~~~ 207 (267)
T 3fla_A 152 --SDAAMLA---DPELLAMVLPA-------------IRSDYRAVETYRHE---PG-RR--VDCPVTVFTGDHDPRVSVGE 207 (267)
T ss_dssp --HHHHHHH---SHHHHHHHHHH-------------HHHHHHHHHHCCCC---TT-CC--BSSCEEEEEETTCTTCCHHH
T ss_pred --cchhhcc---CHHHHHHHHHH-------------HHHHHHhhhccccc---cc-Cc--CCCCEEEEecCCCCCCCHHH
Confidence 0000000 00000000000 00011111111111 11 22 34899999999999999877
Q ss_pred HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+.+.+..+. +++++++++ ||++++++|+++++.|.+||++
T Consensus 208 ~~~~~~~~~~-------~~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~ 248 (267)
T 3fla_A 208 ARAWEEHTTG-------PADLRVLPG-GHFFLVDQAAPMIATMTEKLAG 248 (267)
T ss_dssp HHGGGGGBSS-------CEEEEEESS-STTHHHHTHHHHHHHHHHHTC-
T ss_pred HHHHHHhcCC-------CceEEEecC-CceeeccCHHHHHHHHHHHhcc
Confidence 7665555443 289999998 9999999999999999999975
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=219.63 Aligned_cols=270 Identities=18% Similarity=0.203 Sum_probs=164.9
Q ss_pred ccccceEEEEcccCCC----CCCCceEEEecCCCCCCCChHHHHH------HHHhhhhccCCCCceEEEEeCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSD----RPYTSTAFVLHGLLGSGRNWRSFSR------NLASTLSQTSASSEWRMVLVDLRNHGRSA 94 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~vi~~D~~G~G~S~ 94 (325)
.+|..++|..+.+... ..++|+|||+||++++...|..+.. .|++ .||+|+++|+||||.|.
T Consensus 35 ~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~--------~G~~vi~~D~~G~G~S~ 106 (377)
T 1k8q_A 35 EDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILAD--------AGYDVWLGNSRGNTWAR 106 (377)
T ss_dssp TTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHH--------TTCEEEECCCTTSTTSC
T ss_pred CCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHH--------CCCCEEEecCCCCCCCC
Confidence 5788899888754321 1368999999999999988876554 7876 78999999999999998
Q ss_pred CC-----CCCC-CCCCHHHHHH-HHHHHHH----HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 95 EI-----EGLD-PPHDIANAAN-DLANLVK----AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 95 ~~-----~~~~-~~~~~~~~~~-~l~~~l~----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
.. .... ..++++++++ |+.++++ +++.+ +++++||||||.+++.+|.++|+. ..+|+++|+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~-~~~lvG~S~Gg~ia~~~a~~~p~~-----~~~v~~lvl~~ 180 (377)
T 1k8q_A 107 RNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQD-KLHYVGHSQGTTIGFIAFSTNPKL-----AKRIKTFYALA 180 (377)
T ss_dssp EESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCS-CEEEEEETHHHHHHHHHHHHCHHH-----HTTEEEEEEES
T ss_pred CCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcC-ceEEEEechhhHHHHHHHhcCchh-----hhhhhEEEEeC
Confidence 63 2100 1679999998 8877655 57888 999999999999999999999961 11599999999
Q ss_pred cCCCCCCCCCchhHHH----H-HHHHhhcCCCCCCc---HHHHHHHHHhh--------------------ccc-hhHHHH
Q 020518 164 SVPGKVKTENSEGEVE----K-VLQTLQSLPSSIPS---RKWLVNHMMEL--------------------GFS-KSLSEW 214 (325)
Q Consensus 164 ~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~---~~~~~~~~~~~--------------------~~~-~~~~~~ 214 (325)
+............... . ....+. .....+. .......+... ... .....+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T 1k8q_A 181 PVATVKYTETLINKLMLVPSFLFKLIFG-NKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVY 259 (377)
T ss_dssp CCSCCSSCCSGGGGGGTSCHHHHHHHSC-SSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHH
T ss_pred CchhcccchhHHHHHHhhccHHHHhhcC-ccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHH
Confidence 8754332111110000 0 011110 0000000 00000000000 000 000111
Q ss_pred HhhcccCCCcccccccChhHHHHh-----h------------hcccC-CcccccccCCCCCCcEEEEeeCCCCCCChHHH
Q 020518 215 IGTNLKKSGERETWAFNLDGAVQM-----F------------NSYRE-MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI 276 (325)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~-----~------------~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 276 (325)
.... . ... .......+... + ..+.. ......+..++ +|+++|+|++|.+++++..
T Consensus 260 ~~~~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~~~ 332 (377)
T 1k8q_A 260 LSHN-P---AGT-SVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMH--VPIAVWNGGNDLLADPHDV 332 (377)
T ss_dssp HTTC-C---CCE-EHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCC--SCEEEEEETTCSSSCHHHH
T ss_pred hccC-C---CCc-cHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCC--CCEEEEEeCCCcccCHHHH
Confidence 1100 0 000 00000000000 0 00000 01122345554 8999999999999999888
Q ss_pred HHHHHHhhhcCCCCCCcee-EEEecCCCccccc---cChHHHHHHHHHHHhc
Q 020518 277 QRLEGLANRQGDGSEGKVS-VHVLPNAGHWVHV---DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 324 (325)
+.+.+.+++ .+ +++++++||+.++ ++|+++++.|.+||++
T Consensus 333 ~~~~~~~~~--------~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 333 DLLLSKLPN--------LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHTTCTT--------EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHHHhCcC--------cccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 777776665 66 9999999999997 8999999999999975
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=205.08 Aligned_cols=191 Identities=22% Similarity=0.248 Sum_probs=157.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+|.+++|..+++.. .+++|+|||+||++++...|.. +.+.|.+ .||+|+++|+||+|.|..+. ...
T Consensus 15 ~g~~l~~~~~~p~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~~---~~~ 82 (210)
T 1imj_A 15 QGQALFFREALPGS-GQARFSVLLLHGIRFSSETWQNLGTLHRLAQ--------AGYRAVAIDLPGLGHSKEAA---APA 82 (210)
T ss_dssp TTEEECEEEEECSS-SCCSCEEEECCCTTCCHHHHHHHTHHHHHHH--------TTCEEEEECCTTSGGGTTSC---CSS
T ss_pred CCeEEEEEEeCCCC-CCCCceEEEECCCCCccceeecchhHHHHHH--------CCCeEEEecCCCCCCCCCCC---Ccc
Confidence 68899999987642 2468999999999999999998 5888887 79999999999999998875 356
Q ss_pred CHHHHH--HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 104 DIANAA--NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 104 ~~~~~~--~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
++++.+ +++..++++++.+ +++++|||+||.+++.++.++|+ +++++|++++......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~v~~~~~~~~~~----------- 142 (210)
T 1imj_A 83 PIGELAPGSFLAAVVDALELG-PPVVISPSLSGMYSLPFLTAPGS--------QLPGFVPVAPICTDKI----------- 142 (210)
T ss_dssp CTTSCCCTHHHHHHHHHHTCC-SCEEEEEGGGHHHHHHHHTSTTC--------CCSEEEEESCSCGGGS-----------
T ss_pred hhhhcchHHHHHHHHHHhCCC-CeEEEEECchHHHHHHHHHhCcc--------ccceEEEeCCCccccc-----------
Confidence 666766 9999999999988 99999999999999999999999 9999999997632000
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
....+..++ +|++
T Consensus 143 -----------------------------------------------------------------~~~~~~~~~--~p~l 155 (210)
T 1imj_A 143 -----------------------------------------------------------------NAANYASVK--TPAL 155 (210)
T ss_dssp -----------------------------------------------------------------CHHHHHTCC--SCEE
T ss_pred -----------------------------------------------------------------cchhhhhCC--CCEE
Confidence 001112233 7999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+++|++|. ++++..+.+ +..++ +++++++++||+++.++|+++.+.|.+||+++
T Consensus 156 ~i~g~~D~-~~~~~~~~~-~~~~~--------~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 156 IVYGDQDP-MGQTSFEHL-KQLPN--------HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp EEEETTCH-HHHHHHHHH-TTSSS--------EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred EEEcCccc-CCHHHHHHH-hhCCC--------CCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 99999999 887776666 44443 89999999999999999999999999999864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=210.29 Aligned_cols=238 Identities=15% Similarity=0.097 Sum_probs=164.2
Q ss_pred CccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC
Q 020518 22 PTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP 101 (325)
Q Consensus 22 ~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 101 (325)
....+|..+.|.. + ++|+|||+||++++...|..+++.|.+ .||+|+++|+||+|.|..+. .
T Consensus 25 ~~~~~g~~~~~~~-g------~~~~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~G~G~s~~~~---~ 86 (270)
T 3rm3_A 25 YPVLSGAEPFYAE-N------GPVGVLLVHGFTGTPHSMRPLAEAYAK--------AGYTVCLPRLKGHGTHYEDM---E 86 (270)
T ss_dssp SCCCTTCCCEEEC-C------SSEEEEEECCTTCCGGGTHHHHHHHHH--------TTCEEEECCCTTCSSCHHHH---H
T ss_pred ccCCCCCcccccC-C------CCeEEEEECCCCCChhHHHHHHHHHHH--------CCCEEEEeCCCCCCCCcccc---c
Confidence 3334677787764 2 378999999999999999999999997 79999999999999997643 4
Q ss_pred CCCHHHHHHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 102 PHDIANAANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
.++++++++|+.++++.+. .+ +++++||||||.+++.+|.++|+ |+++|+++++....
T Consensus 87 ~~~~~~~~~d~~~~i~~l~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~---------v~~~v~~~~~~~~~---------- 146 (270)
T 3rm3_A 87 RTTFHDWVASVEEGYGWLKQRCQ-TIFVTGLSMGGTLTLYLAEHHPD---------ICGIVPINAAVDIP---------- 146 (270)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCS-EEEEEEETHHHHHHHHHHHHCTT---------CCEEEEESCCSCCH----------
T ss_pred cCCHHHHHHHHHHHHHHHHhhCC-cEEEEEEcHhHHHHHHHHHhCCC---------ccEEEEEcceeccc----------
Confidence 6799999999999999997 77 99999999999999999999985 99999999864321
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCC-Cc-ccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKS-GE-RETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
.....+...... ..+... + ....... .. ................... +....+..++
T Consensus 147 ~~~~~~~~~~~~-------------~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-- 205 (270)
T 3rm3_A 147 AIAAGMTGGGEL-------------PRYLDS---I-GSDLKNPDVKELAYEKTPTASLLQLARLMA--QTKAKLDRIV-- 205 (270)
T ss_dssp HHHHHSCC---C-------------CSEEEC---C-CCCCSCTTCCCCCCSEEEHHHHHHHHHHHH--HHHHTGGGCC--
T ss_pred ccccchhcchhH-------------HHHHHH---h-CccccccchHhhcccccChhHHHHHHHHHH--HHHhhhhhcC--
Confidence 111111000000 000000 0 0000000 00 0000011111111111110 1122334444
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-HHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-KGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~ 324 (325)
+|+++|+|++|..++++..+.+.+.++.. ++++++++++||+++.+.+ +++.+.|.+||++
T Consensus 206 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 267 (270)
T 3rm3_A 206 CPALIFVSDEDHVVPPGNADIIFQGISST------EKEIVRLRNSYHVATLDYDQPMIIERSLEFFAK 267 (270)
T ss_dssp SCEEEEEETTCSSSCTTHHHHHHHHSCCS------SEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcccCHHHHHHHHHhcCCC------cceEEEeCCCCcccccCccHHHHHHHHHHHHHh
Confidence 89999999999999998888877776651 2699999999999999987 9999999999975
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=214.47 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=98.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|+|...++.. +++++|||+||++++...|..+++.|.+... ....||+|+++|+||||.|+.+... ..+++
T Consensus 93 ~g~~i~~~~~~~~~--~~~~pllllHG~~~s~~~~~~~~~~L~~~~~--~~~~gf~vv~~DlpG~G~S~~~~~~-~~~~~ 167 (408)
T 3g02_A 93 EGLTIHFAALFSER--EDAVPIALLHGWPGSFVEFYPILQLFREEYT--PETLPFHLVVPSLPGYTFSSGPPLD-KDFGL 167 (408)
T ss_dssp TTEEEEEEEECCSC--TTCEEEEEECCSSCCGGGGHHHHHHHHHHCC--TTTCCEEEEEECCTTSTTSCCSCSS-SCCCH
T ss_pred CCEEEEEEEecCCC--CCCCeEEEECCCCCcHHHHHHHHHHHhcccc--cccCceEEEEECCCCCCCCCCCCCC-CCCCH
Confidence 78999999988632 3578999999999999999999999986310 0013799999999999999987521 57899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+++++++.+++++++.+.+++++||||||.+++.+|.++|+
T Consensus 168 ~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~ 208 (408)
T 3g02_A 168 MDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDA 208 (408)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCC
Confidence 99999999999999984389999999999999999999976
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=203.12 Aligned_cols=224 Identities=15% Similarity=0.113 Sum_probs=155.2
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHhC-
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH-DIANAANDLANLVKAKG- 120 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~~~l~~~l~~~~- 120 (325)
++++|||+||++++...|..+++.|.+ .||+|+++|+||||.|..... ... +++++++|+.++++.+.
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~d~~~~i~~l~~ 90 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQR--------SGYGVYVPLFSGHGTVEPLDI--LTKGNPDIWWAESSAAVAHMTA 90 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEECCCTTCSSSCTHHH--HHHCCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHH--------CCCEEEecCCCCCCCCChhhh--cCcccHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999997 899999999999999965432 233 88899999988888774
Q ss_pred -CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHH
Q 020518 121 -WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 121 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (325)
.+ +++++||||||.+++.+|.++|+ ++++++++++....... ...........+............
T Consensus 91 ~~~-~~~l~G~S~Gg~~a~~~a~~~p~--------~~~~~i~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (251)
T 3dkr_A 91 KYA-KVFVFGLSLGGIFAMKALETLPG--------ITAGGVFSSPILPGKHH--LVPGFLKYAEYMNRLAGKSDESTQ-- 157 (251)
T ss_dssp TCS-EEEEEESHHHHHHHHHHHHHCSS--------CCEEEESSCCCCTTCBC--HHHHHHHHHHHHHHHHTCCCCHHH--
T ss_pred hcC-CeEEEEechHHHHHHHHHHhCcc--------ceeeEEEecchhhccch--hhHHHHHHHHHHHhhcccCcchhh--
Confidence 34 89999999999999999999999 99999998876543211 111111111111111111100000
Q ss_pred HHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHH
Q 020518 200 NHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
...+.... ......... .....+..++ +|+++|+|++|..++++..+.+
T Consensus 158 -----------~~~~~~~~-------------~~~~~~~~~-----~~~~~~~~~~--~P~l~i~g~~D~~~~~~~~~~~ 206 (251)
T 3dkr_A 158 -----------ILAYLPGQ-------------LAAIDQFAT-----TVAADLNLVK--QPTFIGQAGQDELVDGRLAYQL 206 (251)
T ss_dssp -----------HHHHHHHH-------------HHHHHHHHH-----HHHHTGGGCC--SCEEEEEETTCSSBCTTHHHHH
T ss_pred -----------HHhhhHHH-------------HHHHHHHHH-----HHhccccccC--CCEEEEecCCCcccChHHHHHH
Confidence 00000000 000000000 0112233443 8999999999999999888877
Q ss_pred HHHhhhcCCCCCCceeEEEecCCCccccccC-hHHHHHHHHHHHhcC
Q 020518 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVDN-PKGLLEIVAPRIASV 325 (325)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~~ 325 (325)
.+.++... ++++++++++||+++.+. |+++.+.|.+||+++
T Consensus 207 ~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 207 RDALINAA-----RVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQE 248 (251)
T ss_dssp HHHCTTCS-----CEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTT
T ss_pred HHHhcCCC-----CceEEEeCCCCcccccccchhHHHHHHHHHHHhh
Confidence 77766421 279999999999999985 999999999999864
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=208.62 Aligned_cols=218 Identities=16% Similarity=0.175 Sum_probs=146.6
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-GWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~ 122 (325)
+++|||+||++++...|..++..|. ++|+|+++|+||||.|.... ..++++++++++.++++++ +.+
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~---------~~~~v~~~D~~G~G~S~~~~---~~~~~~~~a~~~~~~l~~~~~~~ 118 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLG---------DEVAVVPVQLPGRGLRLRER---PYDTMEPLAEAVADALEEHRLTH 118 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHC---------TTEEEEECCCTTSGGGTTSC---CCCSHHHHHHHHHHHHHHTTCSS
T ss_pred CceEEEECCCCCChHHHHHHHHhcC---------CCceEEEEeCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCC
Confidence 4889999999999999999999988 78999999999999997765 5789999999999999999 666
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcc----eEEEEecCCCCCCCCCch-----hHHHHHHHHhhcCCCCCC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK----QLWVLDSVPGKVKTENSE-----GEVEKVLQTLQSLPSSIP 193 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~----~lvli~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 193 (325)
+++|+||||||.+|+.+|.++|+ ++. .++++++........... ..+...+..+.....
T Consensus 119 -~~~lvG~S~Gg~va~~~a~~~p~--------~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 186 (280)
T 3qmv_A 119 -DYALFGHSMGALLAYEVACVLRR--------RGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDD--- 186 (280)
T ss_dssp -SEEEEEETHHHHHHHHHHHHHHH--------TTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC----
T ss_pred -CEEEEEeCHhHHHHHHHHHHHHH--------cCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCCh---
Confidence 99999999999999999999998 666 777777543222111110 011111111110000
Q ss_pred cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCCh
Q 020518 194 SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP 273 (325)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 273 (325)
.. .. ...............+....... ...+..+ ++|+++|+|++|..+++
T Consensus 187 ----------------~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i--~~P~l~i~G~~D~~~~~ 237 (280)
T 3qmv_A 187 ----------------AD---TL-------GAAYFDRRLPVLRADLRACERYD-WHPRPPL--DCPTTAFSAAADPIATP 237 (280)
T ss_dssp ----------------------------------CCTTHHHHHHHHHHHHTCC-CCCCCCB--CSCEEEEEEEECSSSCH
T ss_pred ----------------hh---hc-------CHHHHHHHHHHHHHHHHHHHhcc-ccCCCce--ecCeEEEEecCCCCcCh
Confidence 00 00 00000000111111111111111 1112333 48999999999999998
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc--cChHHHHHHHHHHH
Q 020518 274 DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV--DNPKGLLEIVAPRI 322 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--e~p~~~~~~i~~fl 322 (325)
+..+.+.+..+. ..+++++++ ||+.++ ++|+++++.|.+||
T Consensus 238 ~~~~~~~~~~~~-------~~~~~~~~g-gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 238 EMVEAWRPYTTG-------SFLRRHLPG-NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp HHHHTTGGGBSS-------CEEEEEEEE-ETTGGGSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCC-------ceEEEEecC-CCeEEcCchhHHHHHHHHHhhC
Confidence 777665555443 267788885 999999 89999999999886
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-30 Score=212.19 Aligned_cols=246 Identities=12% Similarity=0.077 Sum_probs=150.8
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
+++++|||+||++++...|..+++.|.+.. .||+|+++|+||||.|..+. .++++++++++.++++.+ .
T Consensus 34 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~------~g~~vi~~D~~G~G~s~~~~----~~~~~~~~~~l~~~~~~~-~ 102 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSYSFRHLLEYINETH------PGTVVTVLDLFDGRESLRPL----WEQVQGFREAVVPIMAKA-P 102 (302)
T ss_dssp -CCCCEEEECCTTCCGGGGHHHHHHHHHHS------TTCCEEECCSSCSGGGGSCH----HHHHHHHHHHHHHHHHHC-T
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHHhcC------CCcEEEEeccCCCccchhhH----HHHHHHHHHHHHHHhhcC-C
Confidence 457899999999999999999999999721 28999999999999997653 468899999999999988 5
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
+ +++++||||||.+++.+|.++|+ .+|+++|+++++....... ..... ..+ .... .. ....
T Consensus 103 ~-~~~lvGhS~Gg~ia~~~a~~~p~-------~~v~~lvl~~~~~~~~~~~--~~~~~---~~~----~~~~-~~-~~~~ 163 (302)
T 1pja_A 103 Q-GVHLICYSQGGLVCRALLSVMDD-------HNVDSFISLSSPQMGQYGD--TDYLK---WLF----PTSM-RS-NLYR 163 (302)
T ss_dssp T-CEEEEEETHHHHHHHHHHHHCTT-------CCEEEEEEESCCTTCBCSC--CHHHH---HHC----TTCC-HH-HHHH
T ss_pred C-cEEEEEECHHHHHHHHHHHhcCc-------cccCEEEEECCCccccccc--chhhh---hHH----HHHH-HH-HHhh
Confidence 7 99999999999999999999997 2499999999865332111 01111 000 0000 00 0001
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc----CCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR----EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
........ ......................+...+.... ..+....+.++ + |+++|+|++|.+++++..+
T Consensus 164 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~-P~lii~G~~D~~v~~~~~~ 237 (302)
T 1pja_A 164 ICYSPWGQ---EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRV--G-HLVLIGGPDDGVITPWQSS 237 (302)
T ss_dssp HHTSTTGG---GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTC--S-EEEEEECTTCSSSSSGGGG
T ss_pred ccchHHHH---HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhcc--C-cEEEEEeCCCCccchhHhh
Confidence 00000000 0000000000000000000000000110000 00112334444 3 9999999999999987665
Q ss_pred HHHHHhhhcCC-------------------CCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 278 RLEGLANRQGD-------------------GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 278 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.+.+..++... ...+++++++++++||+++.|+|+++++.|.+||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 238 FFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp GTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred HhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 55332211000 00012899999999999999999999999999974
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-29 Score=210.06 Aligned_cols=121 Identities=21% Similarity=0.257 Sum_probs=99.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChH----------------HHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR----------------SFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~----------------~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
++..+.|...+. .++|+|||+||++++...|. .++..|.+ .||+|+++|+||
T Consensus 36 ~~~~~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G 103 (354)
T 2rau_A 36 DIISLHKVNLIG----GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLAR--------NGFNVYTIDYRT 103 (354)
T ss_dssp CEEEEEEEEETT----CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHH--------TTEEEEEEECGG
T ss_pred CceEEEeecccC----CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHh--------CCCEEEEecCCC
Confidence 455666666544 24789999999999987544 78888887 799999999999
Q ss_pred CCCCCCCCCCC----CCCCHHHHHHHHHHHHHH----hCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEE
Q 020518 90 HGRSAEIEGLD----PPHDIANAANDLANLVKA----KGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLW 160 (325)
Q Consensus 90 ~G~S~~~~~~~----~~~~~~~~~~~l~~~l~~----~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lv 160 (325)
||.|..+.... ..++++++++|+.++++. ++.+ +++++||||||.+++.+|.++ |+ +|+++|
T Consensus 104 ~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~p~--------~v~~lv 174 (354)
T 2rau_A 104 HYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQE-RIYLAGESFGGIAALNYSSLYWKN--------DIKGLI 174 (354)
T ss_dssp GGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCS-SEEEEEETHHHHHHHHHHHHHHHH--------HEEEEE
T ss_pred CCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHhcCCc-eEEEEEECHhHHHHHHHHHhcCcc--------ccceEE
Confidence 99998654200 167889999999999987 4778 999999999999999999999 99 999999
Q ss_pred EEecCCC
Q 020518 161 VLDSVPG 167 (325)
Q Consensus 161 li~~~~~ 167 (325)
++++.+.
T Consensus 175 l~~~~~~ 181 (354)
T 2rau_A 175 LLDGGPT 181 (354)
T ss_dssp EESCSCB
T ss_pred Eeccccc
Confidence 9987643
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=196.31 Aligned_cols=219 Identities=14% Similarity=0.108 Sum_probs=160.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.++.+..+++. .+|+|||+||++++...|..++..|.+ .||.|+++|+||+|.|..+. ..+++
T Consensus 14 ~g~~l~~~~~~p~----~~p~vv~~HG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~g~s~~~~---~~~~~ 78 (290)
T 3ksr_A 14 GQDELSGTLLTPT----GMPGVLFVHGWGGSQHHSLVRAREAVG--------LGCICMTFDLRGHEGYASMR---QSVTR 78 (290)
T ss_dssp TTEEEEEEEEEEE----SEEEEEEECCTTCCTTTTHHHHHHHHT--------TTCEEECCCCTTSGGGGGGT---TTCBH
T ss_pred CCeEEEEEEecCC----CCcEEEEeCCCCCCcCcHHHHHHHHHH--------CCCEEEEeecCCCCCCCCCc---ccccH
Confidence 5678888888874 589999999999999999999999996 79999999999999998765 57899
Q ss_pred HHHHHHHHHHHHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 106 ANAANDLANLVKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
.++++|+.++++.+. .+ +++++||||||.+++.++.++| +++++++++..............
T Consensus 79 ~~~~~d~~~~i~~l~~~~~~~~~-~v~l~G~S~Gg~~a~~~a~~~~----------~~~~~l~~p~~~~~~~~~~~~~~- 146 (290)
T 3ksr_A 79 AQNLDDIKAAYDQLASLPYVDAH-SIAVVGLSYGGYLSALLTRERP----------VEWLALRSPALYKDAHWDQPKVS- 146 (290)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHTTTSC----------CSEEEEESCCCCCSSCTTSBHHH-
T ss_pred HHHHHHHHHHHHHHHhcCCCCcc-ceEEEEEchHHHHHHHHHHhCC----------CCEEEEeCcchhhhhhhhccccc-
Confidence 999999999999883 24 7999999999999999999875 57888887764332110000000
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
... ......+..... ..........+..++ +|
T Consensus 147 -------------------~~~------~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~--~P 178 (290)
T 3ksr_A 147 -------------------LNA------DPDLMDYRRRAL---------------------APGDNLALAACAQYK--GD 178 (290)
T ss_dssp -------------------HHH------STTHHHHTTSCC---------------------CGGGCHHHHHHHHCC--SE
T ss_pred -------------------ccC------Chhhhhhhhhhh---------------------hhccccHHHHHHhcC--CC
Confidence 000 001111111000 000011111223333 79
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
+++|+|++|..++++..+.+.+.++..+. +++++++++||+++.+ .++++.+.|.+||+.
T Consensus 179 ~lii~G~~D~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 239 (290)
T 3ksr_A 179 VLLVEAENDVIVPHPVMRNYADAFTNARS-----LTSRVIAGADHALSVKEHQQEYTRALIDWLTE 239 (290)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHTTTSSE-----EEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCcccChHHHHHHHHHhccCCC-----ceEEEcCCCCCCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999888888887766332 7899999999987654 889999999999964
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=182.03 Aligned_cols=169 Identities=13% Similarity=0.171 Sum_probs=138.4
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCce---EEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEW---RMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
++|+|||+||++++...|..++..|.+ .|| +|+++|+||+|.|.. .+.+++++++.++++++
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~~~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~ 66 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVS--------QGWSRDKLYAVDFWDKTGTNY-------NNGPVLSRFVQKVLDET 66 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHH--------TTCCGGGEEECCCSCTTCCHH-------HHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHH--------cCCCCccEEEEecCCCCCchh-------hhHHHHHHHHHHHHHHc
Confidence 478999999999999999999999987 777 799999999998743 57789999999999999
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHH
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKW 197 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (325)
+.+ +++++||||||.+++.++.++ |+ +|+++|++++.......
T Consensus 67 ~~~-~~~lvG~S~Gg~~a~~~~~~~~~~~--------~v~~~v~~~~~~~~~~~-------------------------- 111 (181)
T 1isp_A 67 GAK-KVDIVAHSMGGANTLYYIKNLDGGN--------KVANVVTLGGANRLTTG-------------------------- 111 (181)
T ss_dssp CCS-CEEEEEETHHHHHHHHHHHHSSGGG--------TEEEEEEESCCGGGTCS--------------------------
T ss_pred CCC-eEEEEEECccHHHHHHHHHhcCCCc--------eEEEEEEEcCccccccc--------------------------
Confidence 988 999999999999999999998 88 99999999986421100
Q ss_pred HHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 198 LVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
..+ ... ....++|+++|+|++|..++++..
T Consensus 112 -------------------~~~-----------------------~~~-------~~~~~~p~l~i~G~~D~~v~~~~~- 141 (181)
T 1isp_A 112 -------------------KAL-----------------------PGT-------DPNQKILYTSIYSSADMIVMNYLS- 141 (181)
T ss_dssp -------------------BCC-----------------------CCS-------CTTCCCEEEEEEETTCSSSCHHHH-
T ss_pred -------------------ccC-----------------------CCC-------CCccCCcEEEEecCCCcccccccc-
Confidence 000 000 001237999999999999998742
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++ +++++++++||+.+.++| ++.+.|.+||++
T Consensus 142 ----~~~~--------~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~ 175 (181)
T 1isp_A 142 ----RLDG--------ARNVQIHGVGHIGLLYSS-QVNSLIKEGLNG 175 (181)
T ss_dssp ----CCBT--------SEEEEESSCCTGGGGGCH-HHHHHHHHHHTT
T ss_pred ----cCCC--------CcceeeccCchHhhccCH-HHHHHHHHHHhc
Confidence 1233 899999999999999997 799999999975
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=194.63 Aligned_cols=224 Identities=13% Similarity=0.101 Sum_probs=145.0
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
..+++|||+||++++...|..+.+ |. .+|+|+++|+||++.+.. ..++++++++++.++++.+..
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l~---------~~~~v~~~d~~G~~~~~~-----~~~~~~~~~~~~~~~i~~~~~ 83 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-LK---------SDTAVVGLNCPYARDPEN-----MNCTHGAMIESFCNEIRRRQP 83 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-CS---------SSEEEEEEECTTTTCGGG-----CCCCHHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-cC---------CCCEEEEEECCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999887 75 789999999999976654 457999999999999999964
Q ss_pred CCCEEEEEeChhHHHHHHHHH---HccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQ---SCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~---~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
..+++|+||||||.+|+.+|. ++|+ +|+++|++++........ .......+...+.........
T Consensus 84 ~~~~~l~GhS~Gg~ia~~~a~~l~~~~~--------~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---- 150 (265)
T 3ils_A 84 RGPYHLGGWSSGGAFAYVVAEALVNQGE--------EVHSLIIIDAPIPQAMEQ-LPRAFYEHCNSIGLFATQPGA---- 150 (265)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHHHHTTC--------CEEEEEEESCCSSCCCCC-CCHHHHHHHHHTTTTTTSSSS----
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHhCCC--------CceEEEEEcCCCCCcccc-cCHHHHHHHHHHHHhCCCccc----
Confidence 449999999999999999998 5566 799999999764332211 111122222222111000000
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE-EEeeCC---CCCC---
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA-IVRAEK---SDRW--- 271 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~i~g~~---D~~~--- 271 (325)
.... ...............+........ .... +.++|++ +|+|++ |..+
T Consensus 151 -------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~i~~P~~lii~G~~~~~D~~~~~~ 206 (265)
T 3ils_A 151 -------------------SPDG--STEPPSYLIPHFTAVVDVMLDYKL-APLH--ARRMPKVGIVWAADTVMDERDAPK 206 (265)
T ss_dssp -------------------CSSS--CSCCCTTHHHHHHHHHHHTTTCCC-CCCC--CSSCCEEEEEEEEECSSCTTTSCC
T ss_pred -------------------cccC--CHHHHHHHHHHHHHHHHHHHhcCC-CCCc--cCCCCeEEEEEccCCCCccccCcc
Confidence 0000 000000000111111111111111 1112 2348988 999999 8877
Q ss_pred -----------ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc--ccChHHHHHHHHHHHh
Q 020518 272 -----------DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH--VDNPKGLLEIVAPRIA 323 (325)
Q Consensus 272 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~e~p~~~~~~i~~fl~ 323 (325)
+......+.+..+. +++++++++||||+.+ .|+|+++++.|.+||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~w~~~~~~------~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 207 MKGMHFMIQKRTEFGPDGWDTIMPG------ASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp CSSCCTTTSCCCCCSCTTHHHHSTT------CCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred ccCcchhhccccccCcchHHHhCCc------cceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 33333444444441 1289999999999999 8999999999999984
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=187.76 Aligned_cols=201 Identities=14% Similarity=0.067 Sum_probs=147.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC----------CHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH----------DIANAANDL 112 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~----------~~~~~~~~l 112 (325)
.+|+|||+||++++...|..++..|.+ .||.|+++|+||+|.|..+.. ... ++++.++|+
T Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~~~~d~ 92 (238)
T 1ufo_A 23 PKALLLALHGLQGSKEHILALLPGYAE--------RGFLLLAFDAPRHGEREGPPP--SSKSPRYVEEVYRVALGFKEEA 92 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGG--------GTEEEEECCCTTSTTSSCCCC--CTTSTTHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCCcccchHHHHHHHHHHh--------CCCEEEEecCCCCccCCCCCC--cccccchhhhHHHHHHHHHHHH
Confidence 488999999999999999888887776 789999999999999987542 111 367778888
Q ss_pred HHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 113 ANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 113 ~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
.++++.+ +.+ +++++|||+||.+++.++.++|+ .+.+++++++...........
T Consensus 93 ~~~~~~l~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~-------------- 149 (238)
T 1ufo_A 93 RRVAEEAERRFGL-PLFLAGGSLGAFVAHLLLAEGFR--------PRGVLAFIGSGFPMKLPQGQV-------------- 149 (238)
T ss_dssp HHHHHHHHHHHCC-CEEEEEETHHHHHHHHHHHTTCC--------CSCEEEESCCSSCCCCCTTCC--------------
T ss_pred HHHHHHHHhccCC-cEEEEEEChHHHHHHHHHHhccC--------cceEEEEecCCccchhhhhhc--------------
Confidence 7777765 456 99999999999999999999998 899999887653222111000
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
..+ .. ...+. ..+....+..+. ++|+++++|++|.
T Consensus 150 -~~~---------------~~-------------------------~~~~~---~~~~~~~~~~~~-~~P~l~i~g~~D~ 184 (238)
T 1ufo_A 150 -VED---------------PG-------------------------VLALY---QAPPATRGEAYG-GVPLLHLHGSRDH 184 (238)
T ss_dssp -CCC---------------HH-------------------------HHHHH---HSCGGGCGGGGT-TCCEEEEEETTCT
T ss_pred -cCC---------------cc-------------------------cchhh---cCChhhhhhhcc-CCcEEEEECCCCC
Confidence 000 00 00000 011112223331 3799999999999
Q ss_pred CCChHHHHHHHHHhh-hcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLAN-RQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.++++..+.+.+.++ ..+. +++++++++++||+++.+.++++.+.|.+||+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 185 IVPLARMEKTLEALRPHYPE---GRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp TTTHHHHHHHHHHHGGGCTT---CCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHhhcCCC---CceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 999998888888887 4321 028999999999999999999999999999864
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-26 Score=177.36 Aligned_cols=190 Identities=15% Similarity=0.098 Sum_probs=138.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCC-----CCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGL-----LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
.+| ++.+..+.+.. ..++|+||++||+ ..+...|..+...|.+ .||+|+++|+||+|.|......
T Consensus 14 ~~g-~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~~~ 83 (208)
T 3trd_A 14 PVG-QLEVMITRPKG-IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDE--------LGLKTVRFNFRGVGKSQGRYDN 83 (208)
T ss_dssp SSS-EEEEEEECCSS-CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHH--------TTCEEEEECCTTSTTCCSCCCT
T ss_pred CCc-eEEEEEEcCCC-CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHH--------CCCEEEEEecCCCCCCCCCccc
Confidence 356 88888877642 2367999999994 3334447788888887 8999999999999999876320
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 100 DPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
.....+++.+.+..+.+..+.+ +++++||||||.+++.++ .+| +++++|++++....
T Consensus 84 -~~~~~~d~~~~~~~l~~~~~~~-~i~l~G~S~Gg~~a~~~a-~~~---------~v~~~v~~~~~~~~----------- 140 (208)
T 3trd_A 84 -GVGEVEDLKAVLRWVEHHWSQD-DIWLAGFSFGAYISAKVA-YDQ---------KVAQLISVAPPVFY----------- 140 (208)
T ss_dssp -TTHHHHHHHHHHHHHHHHCTTC-EEEEEEETHHHHHHHHHH-HHS---------CCSEEEEESCCTTS-----------
T ss_pred -hHHHHHHHHHHHHHHHHhCCCC-eEEEEEeCHHHHHHHHHh-ccC---------CccEEEEecccccc-----------
Confidence 1222333333333333444556 999999999999999999 666 59999999976400
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
. + ...+..+ ++|
T Consensus 141 ----------------------------------------------------~-------------~-~~~~~~~--~~p 152 (208)
T 3trd_A 141 ----------------------------------------------------E-------------G-FASLTQM--ASP 152 (208)
T ss_dssp ----------------------------------------------------G-------------G-GTTCCSC--CSC
T ss_pred ----------------------------------------------------C-------------C-chhhhhc--CCC
Confidence 0 0 0111222 389
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+++++|++|..++++..+.+.+.++. ++++++++++||++..+. +++.+.|.+||+
T Consensus 153 ~l~i~g~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 153 WLIVQGDQDEVVPFEQVKAFVNQISS-------PVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHSSS-------CCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred EEEEECCCCCCCCHHHHHHHHHHccC-------ceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 99999999999999887777665553 289999999999998774 999999999984
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-26 Score=174.25 Aligned_cols=171 Identities=13% Similarity=0.198 Sum_probs=140.3
Q ss_pred CCceEEEecCCCCCCCChH--HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 43 YTSTAFVLHGLLGSGRNWR--SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
++|+|||+||++++...|. .+.+.|.+ .||.|+++|+||+|.|.... ...++.+.++++.+.+++..
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~---~~~~~~~~~~~~~~~~~~~~ 71 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAER--------LGWTHERPDFTDLDARRDLG---QLGDVRGRLQRLLEIARAAT 71 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHH--------TTCEEECCCCHHHHTCGGGC---TTCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHH--------CCCEEEEeCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999888776 78888887 79999999999999998654 46778889999888888775
Q ss_pred -CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHH
Q 020518 121 -WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 121 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (325)
.+ +++++||||||.+++.++.++| ++++|++++........
T Consensus 72 ~~~-~~~l~G~S~Gg~~a~~~a~~~~----------~~~~v~~~~~~~~~~~~--------------------------- 113 (176)
T 2qjw_A 72 EKG-PVVLAGSSLGSYIAAQVSLQVP----------TRALFLMVPPTKMGPLP--------------------------- 113 (176)
T ss_dssp TTS-CEEEEEETHHHHHHHHHHTTSC----------CSEEEEESCCSCBTTBC---------------------------
T ss_pred CCC-CEEEEEECHHHHHHHHHHHhcC----------hhheEEECCcCCccccC---------------------------
Confidence 45 9999999999999999998863 78999998764321000
Q ss_pred HHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHH
Q 020518 200 NHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
. +..+ ++|+++++|++|..++++..+.+
T Consensus 114 ---------~-----------------------------------------~~~~--~~P~l~i~g~~D~~~~~~~~~~~ 141 (176)
T 2qjw_A 114 ---------A-----------------------------------------LDAA--AVPISIVHAWHDELIPAADVIAW 141 (176)
T ss_dssp ---------C-----------------------------------------CCCC--SSCEEEEEETTCSSSCHHHHHHH
T ss_pred ---------c-----------------------------------------cccc--CCCEEEEEcCCCCccCHHHHHHH
Confidence 0 1222 37999999999999999888777
Q ss_pred HHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+.. + ++++++ ++||+. .+.++++.+.|.+||+++
T Consensus 142 ~~~~-~--------~~~~~~-~~~H~~-~~~~~~~~~~i~~fl~~l 176 (176)
T 2qjw_A 142 AQAR-S--------ARLLLV-DDGHRL-GAHVQAASRAFAELLQSL 176 (176)
T ss_dssp HHHH-T--------CEEEEE-SSCTTC-TTCHHHHHHHHHHHHHTC
T ss_pred HHhC-C--------ceEEEe-CCCccc-cccHHHHHHHHHHHHHhC
Confidence 7766 3 789999 889998 488999999999999875
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-25 Score=179.64 Aligned_cols=191 Identities=15% Similarity=0.107 Sum_probs=143.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCC-----ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-----NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
++ ++.+..+.+.. +.+|+|||+||+++... .|..++..|++ .||.|+++|+||+|.|....
T Consensus 32 ~g-~l~~~~~~p~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~G~s~~~~--- 97 (249)
T 2i3d_A 32 AG-RLEGRYQPSKE--KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQK--------RGFTTLRFNFRSIGRSQGEF--- 97 (249)
T ss_dssp TE-EEEEEEECCSS--TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHH--------TTCEEEEECCTTSTTCCSCC---
T ss_pred Cc-eEEEEEEcCCC--CCCCEEEEECCCcccCCCccchHHHHHHHHHHH--------CCCEEEEECCCCCCCCCCCC---
Confidence 44 77776665432 45789999999854333 24678888886 89999999999999998754
Q ss_pred CCCCHHHHHHHHHHHHHHh---CCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchh
Q 020518 101 PPHDIANAANDLANLVKAK---GWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEG 176 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~---~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~ 176 (325)
..+..++ +|+.++++.+ ..+ .+++++||||||.+++.++.++|+ ++++|++++......
T Consensus 98 -~~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---------v~~~v~~~~~~~~~~------ 160 (249)
T 2i3d_A 98 -DHGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE---------IEGFMSIAPQPNTYD------ 160 (249)
T ss_dssp -CSSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT---------EEEEEEESCCTTTSC------
T ss_pred -CCccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC---------ccEEEEEcCchhhhh------
Confidence 3345554 7777766655 222 179999999999999999999885 999999997642100
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
...+..+
T Consensus 161 -----------------------------------------------------------------------~~~~~~~-- 167 (249)
T 2i3d_A 161 -----------------------------------------------------------------------FSFLAPC-- 167 (249)
T ss_dssp -----------------------------------------------------------------------CTTCTTC--
T ss_pred -----------------------------------------------------------------------hhhhccc--
Confidence 0111222
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+++++|++|..++++..+.+.+.++...+ .++++++++++||+.+ +.++++.+.|.+||++
T Consensus 168 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~ 231 (249)
T 2i3d_A 168 PSSGLIINGDADKVAPEKDVNGLVEKLKTQKG---ILITHRTLPGANHFFN-GKVDELMGECEDYLDR 231 (249)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHHTTSTT---CCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHHHhhccC---CceeEEEECCCCcccc-cCHHHHHHHHHHHHHH
Confidence 37999999999999999888888877763110 1289999999999988 8999999999999964
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-26 Score=176.51 Aligned_cols=176 Identities=12% Similarity=0.190 Sum_probs=131.2
Q ss_pred CCceEEEecCCCCC---CCChHH-HHHHHHhhhhccCCCC-ceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGS---GRNWRS-FSRNLASTLSQTSASS-EWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~---~~~~~~-~~~~l~~~~~~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
++|+|||+||++++ ...|.. +...|.+ . ||+|+++|+||++. . +.++++..+++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~--------~~g~~vi~~d~~g~~~----------~---~~~~~~~~~~~ 61 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEK--------IPGFQCLAKNMPDPIT----------A---RESIWLPFMET 61 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTT--------STTCCEEECCCSSTTT----------C---CHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhh--------ccCceEEEeeCCCCCc----------c---cHHHHHHHHHH
Confidence 46899999999998 467877 7788874 4 99999999998631 1 35677888888
Q ss_pred HhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHH
Q 020518 118 AKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRK 196 (325)
Q Consensus 118 ~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (325)
+++. + +++|+||||||.+++.+|.++| |+++|++++....... . .. ...
T Consensus 62 ~l~~~~-~~~lvG~S~Gg~ia~~~a~~~p----------v~~lvl~~~~~~~~~~-----~-~~---~~~---------- 111 (194)
T 2qs9_A 62 ELHCDE-KTIIIGHSSGAIAAMRYAETHR----------VYAIVLVSAYTSDLGD-----E-NE---RAS---------- 111 (194)
T ss_dssp TSCCCT-TEEEEEETHHHHHHHHHHHHSC----------CSEEEEESCCSSCTTC-----H-HH---HHT----------
T ss_pred HhCcCC-CEEEEEcCcHHHHHHHHHHhCC----------CCEEEEEcCCccccch-----h-hh---HHH----------
Confidence 8888 6 9999999999999999999864 7999999986532110 0 00 000
Q ss_pred HHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH
Q 020518 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI 276 (325)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 276 (325)
.++. .. ..+..+... .+|+++|+|++|..++++..
T Consensus 112 ----------------~~~~----~~-----------------------~~~~~~~~~--~~p~lii~G~~D~~vp~~~~ 146 (194)
T 2qs9_A 112 ----------------GYFT----RP-----------------------WQWEKIKAN--CPYIVQFGSTDDPFLPWKEQ 146 (194)
T ss_dssp ----------------STTS----SC-----------------------CCHHHHHHH--CSEEEEEEETTCSSSCHHHH
T ss_pred ----------------hhhc----cc-----------------------ccHHHHHhh--CCCEEEEEeCCCCcCCHHHH
Confidence 0000 00 000011111 25899999999999999988
Q ss_pred HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 277 QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.+.+.+ + +++++++++||+++.|+|+.+++.+ +||++
T Consensus 147 ~~~~~~~-~--------~~~~~~~~~gH~~~~~~p~~~~~~~-~fl~~ 184 (194)
T 2qs9_A 147 QEVADRL-E--------TKLHKFTDCGHFQNTEFHELITVVK-SLLKV 184 (194)
T ss_dssp HHHHHHH-T--------CEEEEESSCTTSCSSCCHHHHHHHH-HHHTC
T ss_pred HHHHHhc-C--------CeEEEeCCCCCccchhCHHHHHHHH-HHHHh
Confidence 8888777 5 8999999999999999999998876 89975
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=193.13 Aligned_cols=194 Identities=14% Similarity=0.178 Sum_probs=148.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChH-------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR-------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+..+++..+.+.. ..+++|||+||++.+...|. .++..|.+ +||.|+++|+||||.|......
T Consensus 47 ~~~~~~~~~~p~~--~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~--------~G~~V~~~D~~G~G~S~~~~~~ 116 (328)
T 1qlw_A 47 VDQMYVRYQIPQR--AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLR--------KGYSTYVIDQSGRGRSATDISA 116 (328)
T ss_dssp ESCEEEEEEEETT--CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHH--------TTCCEEEEECTTSTTSCCCCHH
T ss_pred eeeEEEEEEccCC--CCCccEEEEeCCCCCCCccccCCCCchHHHHHHHH--------CCCeEEEECCCCcccCCCCCcc
Confidence 4455555544432 24688999999999999998 48888887 8999999999999999865310
Q ss_pred CC---------------------------CCC----------------HHH------------------HHHHHHHHHHH
Q 020518 100 DP---------------------------PHD----------------IAN------------------AANDLANLVKA 118 (325)
Q Consensus 100 ~~---------------------------~~~----------------~~~------------------~~~~l~~~l~~ 118 (325)
.. .+. +++ +++++..+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 196 (328)
T 1qlw_A 117 INAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK 196 (328)
T ss_dssp HHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH
T ss_pred cccccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH
Confidence 00 000 444 78888888888
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
++ +++++||||||.+++.+|.++|+ +|+++|++++...
T Consensus 197 ~~---~~~lvGhS~GG~~a~~~a~~~p~--------~v~~~v~~~p~~~------------------------------- 234 (328)
T 1qlw_A 197 LD---GTVLLSHSQSGIYPFQTAAMNPK--------GITAIVSVEPGEC------------------------------- 234 (328)
T ss_dssp HT---SEEEEEEGGGTTHHHHHHHHCCT--------TEEEEEEESCSCC-------------------------------
T ss_pred hC---CceEEEECcccHHHHHHHHhChh--------heeEEEEeCCCCC-------------------------------
Confidence 75 89999999999999999999999 9999999997530
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCCh-----
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP----- 273 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~----- 273 (325)
... ..+... .++|+|+++|++|..+++
T Consensus 235 -------------------------------~~~----------------~~~~~~-~~~PvLii~G~~D~~~p~~~~~~ 266 (328)
T 1qlw_A 235 -------------------------------PKP----------------EDVKPL-TSIPVLVVFGDHIEEFPRWAPRL 266 (328)
T ss_dssp -------------------------------CCG----------------GGCGGG-TTSCEEEEECSSCTTCTTTHHHH
T ss_pred -------------------------------CCH----------------HHHhhc-cCCCEEEEeccCCccccchhhHH
Confidence 000 000110 137999999999999996
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEEEecCCC-----ccccccC-hHHHHHHHHHHHhc
Q 020518 274 DVIQRLEGLANRQGDGSEGKVSVHVLPNAG-----HWVHVDN-PKGLLEIVAPRIAS 324 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----H~~~~e~-p~~~~~~i~~fl~~ 324 (325)
+..+.+.+.++..+. ++++++++++| |+++.|. ++++++.|.+||++
T Consensus 267 ~~~~~~~~~l~~~g~----~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~ 319 (328)
T 1qlw_A 267 KACHAFIDALNAAGG----KGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 319 (328)
T ss_dssp HHHHHHHHHHHHTTC----CEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC----CceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHh
Confidence 777778787774332 29999999666 9999998 99999999999975
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-26 Score=192.18 Aligned_cols=113 Identities=12% Similarity=0.159 Sum_probs=84.6
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeC----CCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVD----LRNHGRSAEIEGLD 100 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D----~~G~G~S~~~~~~~ 100 (325)
..++|..+|+. .+.+|+|||+||++++... |..+++.|. .||+|+++| +||||.|+.+
T Consensus 24 ~~~~y~~~g~~--~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~---------~g~~Vi~~Dl~~D~~G~G~S~~~---- 88 (335)
T 2q0x_A 24 PYCKIPVFMMN--MDARRCVLWVGGQTESLLSFDYFTNLAEELQ---------GDWAFVQVEVPSGKIGSGPQDHA---- 88 (335)
T ss_dssp TTEEEEEEEEC--TTSSSEEEEECCTTCCTTCSTTHHHHHHHHT---------TTCEEEEECCGGGBTTSCSCCHH----
T ss_pred CceeEEEeccC--CCCCcEEEEECCCCccccchhHHHHHHHHHH---------CCcEEEEEeccCCCCCCCCcccc----
Confidence 67888878731 1246899999999876544 567777774 899999995 5999998542
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHH--HccccccCCccCCcceEEEEecCC
Q 020518 101 PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ--SCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~--~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...+++.+.+..+.+.++++ +++|+||||||.+|+.+|. ++|+ +|+++|++++..
T Consensus 89 --~~~~d~~~~~~~l~~~l~~~-~~~LvGhSmGG~iAl~~A~~~~~p~--------rV~~lVL~~~~~ 145 (335)
T 2q0x_A 89 --HDAEDVDDLIGILLRDHCMN-EVALFATSTGTQLVFELLENSAHKS--------SITRVILHGVVC 145 (335)
T ss_dssp --HHHHHHHHHHHHHHHHSCCC-CEEEEEEGGGHHHHHHHHHHCTTGG--------GEEEEEEEEECC
T ss_pred --CcHHHHHHHHHHHHHHcCCC-cEEEEEECHhHHHHHHHHHhccchh--------ceeEEEEECCcc
Confidence 11233333333334447888 9999999999999999999 5798 999999999864
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=188.56 Aligned_cols=187 Identities=14% Similarity=0.055 Sum_probs=140.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..++|...+. ...+|+|||+||++++...|..++..|.+ .||.|+++|+||+|.+... ...++
T Consensus 39 ~~~~l~~p~~~~---~~~~p~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~~~~~----~~~d~ 103 (262)
T 1jfr_A 39 GGGTIYYPTSTA---DGTFGAVVISPGFTAYQSSIAWLGPRLAS--------QGFVVFTIDTNTTLDQPDS----RGRQL 103 (262)
T ss_dssp CCEEEEEESCCT---TCCEEEEEEECCTTCCGGGTTTHHHHHHT--------TTCEEEEECCSSTTCCHHH----HHHHH
T ss_pred CceeEEecCCCC---CCCCCEEEEeCCcCCCchhHHHHHHHHHh--------CCCEEEEeCCCCCCCCCch----hHHHH
Confidence 345666665432 13578999999999999999999999986 8999999999999976431 11112
Q ss_pred HHHHHHHHH---HHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLAN---LVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~---~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
...++.+.+ ++..++.+ +++++||||||.+++.++.++|+ |+++|++++...
T Consensus 104 ~~~~~~l~~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~---------v~~~v~~~p~~~--------------- 158 (262)
T 1jfr_A 104 LSALDYLTQRSSVRTRVDAT-RLGVMGHSMGGGGSLEAAKSRTS---------LKAAIPLTGWNT--------------- 158 (262)
T ss_dssp HHHHHHHHHTSTTGGGEEEE-EEEEEEETHHHHHHHHHHHHCTT---------CSEEEEESCCCS---------------
T ss_pred HHHHHHHHhccccccccCcc-cEEEEEEChhHHHHHHHHhcCcc---------ceEEEeecccCc---------------
Confidence 222222222 12234556 89999999999999999999985 899999886421
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
...+..+ ++|+++
T Consensus 159 -----------------------------------------------------------------~~~~~~~--~~P~l~ 171 (262)
T 1jfr_A 159 -----------------------------------------------------------------DKTWPEL--RTPTLV 171 (262)
T ss_dssp -----------------------------------------------------------------CCCCTTC--CSCEEE
T ss_pred -----------------------------------------------------------------ccccccc--CCCEEE
Confidence 0122333 389999
Q ss_pred EeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|++|..++++. .+.+.+.++... ++++++++++||+.+.+.++++.+.|.+||++
T Consensus 172 i~G~~D~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 229 (262)
T 1jfr_A 172 VGADGDTVAPVATHSKPFYESLPGSL-----DKAYLELRGASHFTPNTSDTTIAKYSISWLKR 229 (262)
T ss_dssp EEETTCSSSCTTTTHHHHHHHSCTTS-----CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred EecCccccCCchhhHHHHHHHhhcCC-----CceEEEeCCCCcCCcccchHHHHHHHHHHHHH
Confidence 9999999999987 877777765422 27999999999999999999999999999974
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=178.18 Aligned_cols=166 Identities=14% Similarity=0.079 Sum_probs=131.5
Q ss_pred CceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
+++|||+||++++. ..|......+. . .++.+|+||++ .++++++++++.+++++++ +
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~---------~--~~~~v~~~~~~----------~~~~~~~~~~~~~~~~~~~-~ 74 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRF---------P--HWQRIRQREWY----------QADLDRWVLAIRRELSVCT-Q 74 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHC---------T--TSEECCCSCCS----------SCCHHHHHHHHHHHHHTCS-S
T ss_pred CceEEEECCCCCCchhhHHHHHHHhc---------C--CeEEEeccCCC----------CcCHHHHHHHHHHHHHhcC-C
Confidence 78999999999988 67877665443 2 34667888863 4578999999999999987 7
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++++||||||.+++.+|.++|+ +|+++|++++.......
T Consensus 75 -~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~------------------------------- 114 (191)
T 3bdv_A 75 -PVILIGHSFGALAACHVVQQGQE--------GIAGVMLVAPAEPMRFE------------------------------- 114 (191)
T ss_dssp -CEEEEEETHHHHHHHHHHHTTCS--------SEEEEEEESCCCGGGGT-------------------------------
T ss_pred -CeEEEEEChHHHHHHHHHHhcCC--------CccEEEEECCCcccccc-------------------------------
Confidence 99999999999999999999999 99999999986422100
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
+.. . ..+..++ +|+++++|++|..++++..+.+.+.
T Consensus 115 ----~~~-----------------------~---------------~~~~~~~--~P~lii~g~~D~~~~~~~~~~~~~~ 150 (191)
T 3bdv_A 115 ----IDD-----------------------R---------------IQASPLS--VPTLTFASHNDPLMSFTRAQYWAQA 150 (191)
T ss_dssp ----CTT-----------------------T---------------SCSSCCS--SCEEEEECSSBTTBCHHHHHHHHHH
T ss_pred ----Ccc-----------------------c---------------cccccCC--CCEEEEecCCCCcCCHHHHHHHHHh
Confidence 000 0 1223333 8999999999999999888887776
Q ss_pred hhhcCCCCCCceeEEEecCCCccccc----cChHHHHHHHHHHHhcC
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGHWVHV----DNPKGLLEIVAPRIASV 325 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~~ 325 (325)
. + +++++++++||+++. +.|+.+ +.|.+||+++
T Consensus 151 ~-~--------~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 151 W-D--------SELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp H-T--------CEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred c-C--------CcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 5 3 899999999999998 566666 9999999864
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=182.34 Aligned_cols=242 Identities=10% Similarity=0.084 Sum_probs=150.3
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCC---CCCCChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
.+|.++.|..+.+.. ...+|+|||+||++ ++...|. .+.+.|. ++|+|+++|+||+|.+..
T Consensus 11 ~dg~~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~---------~~~~v~~~d~~~~~~~~~----- 75 (275)
T 3h04_A 11 KDAFALPYTIIKAKN-QPTKGVIVYIHGGGLMFGKANDLSPQYIDILT---------EHYDLIQLSYRLLPEVSL----- 75 (275)
T ss_dssp TTSCEEEEEEECCSS-SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHT---------TTEEEEEECCCCTTTSCH-----
T ss_pred CCcEEEEEEEEccCC-CCCCCEEEEEECCcccCCchhhhHHHHHHHHH---------hCceEEeeccccCCcccc-----
Confidence 468899999887642 24678999999998 6666665 6777777 449999999999987633
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 101 PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
....+++.+.+..+.+.++.+ +++|+||||||.+++.+|.+ + +++++|++++........ ......
T Consensus 76 -~~~~~d~~~~~~~l~~~~~~~-~i~l~G~S~Gg~~a~~~a~~--~--------~v~~~v~~~~~~~~~~~~--~~~~~~ 141 (275)
T 3h04_A 76 -DCIIEDVYASFDAIQSQYSNC-PIFTFGRSSGAYLSLLIARD--R--------DIDGVIDFYGYSRINTEP--FKTTNS 141 (275)
T ss_dssp -HHHHHHHHHHHHHHHHTTTTS-CEEEEEETHHHHHHHHHHHH--S--------CCSEEEEESCCSCSCSHH--HHSCCH
T ss_pred -chhHHHHHHHHHHHHhhCCCC-CEEEEEecHHHHHHHHHhcc--C--------CccEEEeccccccccccc--cccccc
Confidence 334566666666677777777 99999999999999999998 5 899999999875432110 000000
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChh-------HHHHhhhcc----cCC-ccc
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLD-------GAVQMFNSY----REM-SYW 248 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~----~~~-~~~ 248 (325)
...... . .........+.................. .....+... ... ...
T Consensus 142 ~~~~~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (275)
T 3h04_A 142 YYAKIA-----------------Q-SINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAP 203 (275)
T ss_dssp HHHHHH-----------------T-TSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCH
T ss_pred hhhccc-----------------c-cchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhcccccccccccccc
Confidence 000000 0 0000000000000000000000000000 000000000 000 001
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh---HHHHHHHHHHHhc
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP---KGLLEIVAPRIAS 324 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 324 (325)
..+..++ |+++|+|++|..++++..+.+.+.+++ +++++++++||.++.+.+ +++.+.+.+||++
T Consensus 204 ~~~~~~~---P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~ 271 (275)
T 3h04_A 204 DELKTLP---PVFIAHCNGDYDVPVEESEHIMNHVPH--------STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNA 271 (275)
T ss_dssp HHHTTCC---CEEEEEETTCSSSCTHHHHHHHTTCSS--------EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHH
T ss_pred chhccCC---CEEEEecCCCCCCChHHHHHHHHhcCC--------ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHH
Confidence 1123333 999999999999999888877776655 899999999999999998 6999999999964
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-27 Score=184.24 Aligned_cols=192 Identities=16% Similarity=0.070 Sum_probs=147.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChH--HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-CCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR--SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-LDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~ 102 (325)
+|.++.+..+.+.. .+|+||++||++++...|. .++..|.+ .||.|+++|+||+|.|..... ....
T Consensus 20 ~g~~l~~~~~~p~~---~~p~vv~~hG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~~~~~~~~ 88 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG---ATGIVLFAHGSGSSRYSPRNRYVAEVLQQ--------AGLATLLIDLLTQEEEEIDLRTRHLR 88 (223)
T ss_dssp TTEEEEEEEECCTT---CCEEEEEECCTTCCTTCHHHHHHHHHHHH--------HTCEEEEECSSCHHHHHHHHHHCSST
T ss_pred CCeEEEEEEecCCC---CceEEEEecCCCCCCCccchHHHHHHHHH--------CCCEEEEEcCCCcCCCCccchhhccc
Confidence 67789888877642 5789999999999888654 67788876 789999999999998865421 0023
Q ss_pred CCHHHHHHHHHHHHHHhCCC-----CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 HDIANAANDLANLVKAKGWD-----WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
++++++++|+.++++.+... .+++++|||+||.+++.++.++|+ +++++|++++.+...
T Consensus 89 ~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--------~v~~~v~~~~~~~~~-------- 152 (223)
T 2o2g_A 89 FDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPE--------TVQAVVSRGGRPDLA-------- 152 (223)
T ss_dssp TCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCGGGC--------
T ss_pred CcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCC--------ceEEEEEeCCCCCcC--------
Confidence 78999999999999876322 189999999999999999999998 999999998742100
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
...+..++
T Consensus 153 ----------------------------------------------------------------------~~~~~~~~-- 160 (223)
T 2o2g_A 153 ----------------------------------------------------------------------PSALPHVK-- 160 (223)
T ss_dssp ----------------------------------------------------------------------TTTGGGCC--
T ss_pred ----------------------------------------------------------------------HHHHhcCC--
Confidence 01122333
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
+|+++++|++|..++....+.+.+... ++++++++++||+... +.++++.+.|.+||++
T Consensus 161 ~P~l~i~g~~D~~~~~~~~~~~~~~~~--------~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 220 (223)
T 2o2g_A 161 APTLLIVGGYDLPVIAMNEDALEQLQT--------SKRLVIIPRASHLFEEPGALTAVAQLASEWFMH 220 (223)
T ss_dssp SCEEEEEETTCHHHHHHHHHHHHHCCS--------SEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCHHHHHHHHhhCC--------CeEEEEeCCCCcccCChHHHHHHHHHHHHHHHH
Confidence 799999999999886554444433322 2899999999999776 5679999999999964
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-27 Score=188.47 Aligned_cols=220 Identities=14% Similarity=0.226 Sum_probs=126.8
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW- 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~- 121 (325)
.+++|||+||+++++..|..+++.|. ++|+|+++|+||||.|..+. .+++.+.+..++++++.
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~---------~~~~vi~~Dl~GhG~S~~~~-------~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQ---------GECEMLAAEPPGHGTNQTSA-------IEDLEELTDLYKQELNLR 75 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHC---------CSCCCEEEECCSSCCSCCCT-------TTHHHHHHHHTTTTCCCC
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCC---------CCeEEEEEeCCCCCCCCCCC-------cCCHHHHHHHHHHHHHhh
Confidence 47899999999999999999999987 68999999999999996531 23444445555556665
Q ss_pred --CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC-chhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 122 --DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN-SEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 122 --~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
+ +++|+||||||.+|+.+|.++++.. ....++++.+..+....... ........+..+..... ..
T Consensus 76 ~~~-~~~lvGhSmGG~iA~~~A~~~~~~~-----~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----- 143 (242)
T 2k2q_B 76 PDR-PFVLFGHSMGGMITFRLAQKLEREG-----IFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGG-MP----- 143 (242)
T ss_dssp CCS-SCEEECCSSCCHHHHHHHHHHHHHH-----CSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTC-CC-----
T ss_pred cCC-CEEEEeCCHhHHHHHHHHHHHHHcC-----CCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCC-CC-----
Confidence 4 8999999999999999998843200 01233444332221111100 00000111111100000 00
Q ss_pred HHHHHhhccchhHH-HHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 199 VNHMMELGFSKSLS-EWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 199 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
..... ....... .............+ ... .+..++ +|+++|+|++|..++ ...+
T Consensus 144 ---------~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~~~-~l~~i~--~P~lvi~G~~D~~~~-~~~~ 198 (242)
T 2k2q_B 144 ---------AELVENKEVMSFF---------LPSFRSDYRALEQF---ELY-DLAQIQ--SPVHVFNGLDDKKCI-RDAE 198 (242)
T ss_dssp ---------CTTTHHHHTTTTC---------CSCHHHHHHHHTCC---CCS-CCTTCC--CSEEEEEECSSCCHH-HHHH
T ss_pred ---------hHHhcCHHHHHHH---------HHHHHHHHHHHHhc---ccC-CCCccC--CCEEEEeeCCCCcCH-HHHH
Confidence 00000 0000000 00001111111111 111 134444 899999999998753 3333
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+.+..++ .+++++++ ||++++|+|++|++.|.+||+.
T Consensus 199 ~~~~~~~~--------~~~~~~~~-gH~~~~e~p~~~~~~i~~fl~~ 236 (242)
T 2k2q_B 199 GWKKWAKD--------ITFHQFDG-GHMFLLSQTEEVAERIFAILNQ 236 (242)
T ss_dssp HHHTTCCC--------SEEEEEEC-CCSHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHhcC--------CeEEEEeC-CceeEcCCHHHHHHHHHHHhhc
Confidence 34333332 67888885 9999999999999999999975
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-24 Score=180.78 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=143.0
Q ss_pred CCceEEEecCC--CCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 43 YTSTAFVLHGL--LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 43 ~~~~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
++++|||+||+ +++...|..++..|. .+|+|+++|+||||.|..+ ..+++++++++.++++++
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~~~~~~L~---------~~~~v~~~d~~G~G~~~~~-----~~~~~~~~~~~~~~l~~~~ 145 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYSRLAEELD---------AGRRVSALVPPGFHGGQAL-----PATLTVLVRSLADVVQAEV 145 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGHHHHHHHC---------TTSEEEEEECTTSSTTCCE-----ESSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCcCCCHHHHHHHHHHhC---------CCceEEEeeCCCCCCCCCC-----CCCHHHHHHHHHHHHHHhc
Confidence 47899999996 678889999999995 7999999999999987653 468999999999999887
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHc---cccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHH
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSC---ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRK 196 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~---p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (325)
+.+ +++|+||||||.+|+.+|.++ |+ +|+++|++++.+...... ....+...+. .
T Consensus 146 ~~~-~~~lvGhS~Gg~vA~~~A~~~~~~~~--------~v~~lvl~~~~~~~~~~~----~~~~~~~~~~---------~ 203 (319)
T 3lcr_A 146 ADG-EFALAGHSSGGVVAYEVARELEARGL--------APRGVVLIDSYSFDGDGG----RPEELFRSAL---------N 203 (319)
T ss_dssp TTS-CEEEEEETHHHHHHHHHHHHHHHTTC--------CCSCEEEESCCCCCSSCC----HHHHHHHHHH---------H
T ss_pred CCC-CEEEEEECHHHHHHHHHHHHHHhcCC--------CccEEEEECCCCCCccch----hhHHHHHHHH---------H
Confidence 446 999999999999999999998 66 899999999875432210 1111111110 0
Q ss_pred HHHHHHH-hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH
Q 020518 197 WLVNHMM-ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV 275 (325)
Q Consensus 197 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 275 (325)
....... ..... .... ........+..+.... ... .++|+++|+|++ +.+++..
T Consensus 204 ~~~~~~~~~~~~~-~~~~-----------------~l~~~~~~~~~~~~~~----~~~--i~~PvLli~g~~-~~~~~~~ 258 (319)
T 3lcr_A 204 ERFVEYLRLTGGG-NLSQ-----------------RITAQVWCLELLRGWR----PEG--LTAPTLYVRPAQ-PLVEQEK 258 (319)
T ss_dssp HHHHHHHHHHCCC-CHHH-----------------HHHHHHHHHHHTTTCC----CCC--CSSCEEEEEESS-CSSSCCC
T ss_pred HHHhhhhcccCCC-chhH-----------------HHHHHHHHHHHHhcCC----CCC--cCCCEEEEEeCC-CCCCccc
Confidence 0000000 00000 0000 0011111111111111 122 348999999887 5666655
Q ss_pred HHHHHHHhhhcCCCCCCceeEEEecCCCcccccc--ChHHHHHHHHHHHhc
Q 020518 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD--NPKGLLEIVAPRIAS 324 (325)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 324 (325)
...+.+..+. ..+++++++ ||+.+++ +|+++++.|.+||++
T Consensus 259 ~~~~~~~~~~-------~~~~~~~~g-~H~~~~~~~~~~~va~~i~~fL~~ 301 (319)
T 3lcr_A 259 PEWRGDVLAA-------MGQVVEAPG-DHFTIIEGEHVASTAHIVGDWLRE 301 (319)
T ss_dssp THHHHHHHHT-------CSEEEEESS-CTTGGGSTTTHHHHHHHHHHHHHH
T ss_pred chhhhhcCCC-------CceEEEeCC-CcHHhhCcccHHHHHHHHHHHHHh
Confidence 5666665553 278888886 8998886 999999999999974
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-25 Score=188.79 Aligned_cols=223 Identities=12% Similarity=0.049 Sum_probs=157.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|.+..+.+.+. ...|+||++||++++...|......|.+ +||.|+++|+||+|.|..... ...++
T Consensus 135 dg~~i~~~l~~p~~~-~~~P~vl~~hG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~G~s~~~~~--~~~~~ 203 (386)
T 2jbw_A 135 DGIPMPVYVRIPEGP-GPHPAVIMLGGLESTKEESFQMENLVLD--------RGMATATFDGPGQGEMFEYKR--IAGDY 203 (386)
T ss_dssp TTEEEEEEEECCSSS-CCEEEEEEECCSSCCTTTTHHHHHHHHH--------TTCEEEEECCTTSGGGTTTCC--SCSCH
T ss_pred CCEEEEEEEEcCCCC-CCCCEEEEeCCCCccHHHHHHHHHHHHh--------CCCEEEEECCCCCCCCCCCCC--CCccH
Confidence 677888887766432 4578999999999998877777777776 899999999999999833322 57789
Q ss_pred HHHHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
.+++.++.+++.+ ++.+ +++++|||+||.+++.++.+ |+ +++++|++ +........ ..+
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~-~i~l~G~S~GG~la~~~a~~-~~--------~~~a~v~~-~~~~~~~~~---~~~---- 265 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRND-AIGVLGRSLGGNYALKSAAC-EP--------RLAACISW-GGFSDLDYW---DLE---- 265 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEE-EEEEEEETHHHHHHHHHHHH-CT--------TCCEEEEE-SCCSCSTTG---GGS----
T ss_pred HHHHHHHHHHHHhCCCcCcc-cEEEEEEChHHHHHHHHHcC-Cc--------ceeEEEEe-ccCChHHHH---Hhc----
Confidence 9999999999988 5667 99999999999999999999 88 99999999 654332110 000
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHH-HhhhcccCCcccccccCCCCCCcEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAV-QMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
. ....... .+. .... ...... ..+.. .+....+.+++ +|+|
T Consensus 266 ----------~---~~~~~~~---------~~~---~g~~--------~~~~~~~~~~~~---~~~~~~~~~i~--~P~L 307 (386)
T 2jbw_A 266 ----------T---PLTKESW---------KYV---SKVD--------TLEEARLHVHAA---LETRDVLSQIA--CPTY 307 (386)
T ss_dssp ----------C---HHHHHHH---------HHH---TTCS--------SHHHHHHHHHHH---TCCTTTGGGCC--SCEE
T ss_pred ----------c---HHHHHHH---------HHH---hCCC--------CHHHHHHHHHHh---CChhhhhcccC--CCEE
Confidence 0 0000000 000 0000 001111 11111 12223344444 8999
Q ss_pred EEeeCCCCCCChHHHHHHHHHh-hhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLA-NRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|+|++|. +++...+.+.+.+ +. ++++++++++||.. .++++++.+.|.+||++
T Consensus 308 ii~G~~D~-v~~~~~~~l~~~l~~~-------~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 362 (386)
T 2jbw_A 308 ILHGVHDE-VPLSFVDTVLELVPAE-------HLNLVVEKDGDHCC-HNLGIRPRLEMADWLYD 362 (386)
T ss_dssp EEEETTSS-SCTHHHHHHHHHSCGG-------GEEEEEETTCCGGG-GGGTTHHHHHHHHHHHH
T ss_pred EEECCCCC-CCHHHHHHHHHHhcCC-------CcEEEEeCCCCcCC-ccchHHHHHHHHHHHHH
Confidence 99999999 8988888887777 52 18999999999965 67899999999999964
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=176.58 Aligned_cols=192 Identities=15% Similarity=0.120 Sum_probs=140.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEe--CCCCCCCCCCCCCC-CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLV--DLRNHGRSAEIEGL-DP 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~--D~~G~G~S~~~~~~-~~ 101 (325)
.++.+++|...+.. +.+|+||++||++++...|..+...|+ +||.|+++ |++|+|.|...... ..
T Consensus 22 ~~~~~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~~~~~l~---------~g~~v~~~~~d~~g~g~s~~~~~~~~~ 89 (226)
T 2h1i_A 22 SNAMMKHVFQKGKD---TSKPVLLLLHGTGGNELDLLPLAEIVD---------SEASVLSVRGNVLENGMPRFFRRLAEG 89 (226)
T ss_dssp HHSSSCEEEECCSC---TTSCEEEEECCTTCCTTTTHHHHHHHH---------TTSCEEEECCSEEETTEEESSCEEETT
T ss_pred CCCceeEEecCCCC---CCCcEEEEEecCCCChhHHHHHHHHhc---------cCceEEEecCcccCCcchhhccccCcc
Confidence 36788888887652 358899999999999999999999888 78999999 99999987532210 02
Q ss_pred CCCHHHHHHH---HHHHH----HHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 102 PHDIANAAND---LANLV----KAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 102 ~~~~~~~~~~---l~~~l----~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
.++..++.++ +.+++ +.. +.+ +++++||||||.+++.++.++|+ +++++|++++......
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~--------~~~~~v~~~~~~~~~~-- 158 (226)
T 2h1i_A 90 IFDEEDLIFRTKELNEFLDEAAKEYKFDRN-NIVAIGYSNGANIAASLLFHYEN--------ALKGAVLHHPMVPRRG-- 158 (226)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHTTCCTT-CEEEEEETHHHHHHHHHHHHCTT--------SCSEEEEESCCCSCSS--
T ss_pred CcChhhHHHHHHHHHHHHHHHHhhcCCCcc-cEEEEEEChHHHHHHHHHHhChh--------hhCEEEEeCCCCCcCc--
Confidence 3455555444 33344 333 446 99999999999999999999999 9999999998642210
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
....
T Consensus 159 ----------------------------------------------------------------------------~~~~ 162 (226)
T 2h1i_A 159 ----------------------------------------------------------------------------MQLA 162 (226)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0001
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
. ..++|+++++|++|..++++..+.+.+.++..+. ++++ +++++||..+.+.++.+.+.|.++
T Consensus 163 ~-~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~----~~~~-~~~~~gH~~~~~~~~~~~~~l~~~ 225 (226)
T 2h1i_A 163 N-LAGKSVFIAAGTNDPICSSAESEELKVLLENANA----NVTM-HWENRGHQLTMGEVEKAKEWYDKA 225 (226)
T ss_dssp C-CTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTC----EEEE-EEESSTTSCCHHHHHHHHHHHHHH
T ss_pred c-ccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCC----eEEE-EeCCCCCCCCHHHHHHHHHHHHHh
Confidence 1 1237999999999999999888888888875332 2666 999999999766555555544443
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=186.19 Aligned_cols=212 Identities=15% Similarity=0.131 Sum_probs=140.2
Q ss_pred CCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHH
Q 020518 42 PYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLAN-LVKA 118 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~-~l~~ 118 (325)
.++++|||+||++++. ..|..+...|. .+|+|+++|+||||.|.. ..++++++++++.+ +++.
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~-----~~~~~~~~a~~~~~~l~~~ 130 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFTRLAGALR---------GIAPVRAVPQPGYEEGEP-----LPSSMAAVAAVQADAVIRT 130 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTHHHHHHTS---------SSCCBCCCCCTTSSTTCC-----BCSSHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcccCcHHHHHHHHHhcC---------CCceEEEecCCCCCCCCC-----CCCCHHHHHHHHHHHHHHh
Confidence 3578999999999987 99999988887 679999999999999875 35799999999884 5677
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
++.+ +++|+||||||.+++.+|.++|+ ...+|+++|++++.+.... .....+...+
T Consensus 131 ~~~~-~~~LvGhS~GG~vA~~~A~~~p~-----~g~~v~~lvl~~~~~~~~~-----~~~~~~~~~~------------- 186 (300)
T 1kez_A 131 QGDK-PFVVAGHSAGALMAYALATELLD-----RGHPPRGVVLIDVYPPGHQ-----DAMNAWLEEL------------- 186 (300)
T ss_dssp CSSC-CEEEECCTHHHHHHHHHHHHTTT-----TTCCCSEEECBTCCCTTTC-----HHHHHHHHHH-------------
T ss_pred cCCC-CEEEEEECHhHHHHHHHHHHHHh-----cCCCccEEEEECCCCCcch-----hHHHHHHHHH-------------
Confidence 7777 99999999999999999999883 0128999999998653221 0111111100
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
....+.. .. .............+....... ....+ ++|+++|+| +|+.+++.. .
T Consensus 187 ----~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~----~~~~i--~~P~lii~G-~d~~~~~~~-~- 240 (300)
T 1kez_A 187 ----TATLFDR------------ET-VRMDDTRLTALGAYDRLTGQW----RPRET--GLPTLLVSA-GEPMGPWPD-D- 240 (300)
T ss_dssp ----HGGGCCC------------CS-SCCCHHHHHHHHHHHHHTTTC----CCCCC--SCCBEEEEE-SSCSSCCCS-S-
T ss_pred ----HHHHHhC------------cC-CccchHHHHHHHHHHHHHhcC----CCCCC--CCCEEEEEe-CCCCCCCcc-c-
Confidence 0000000 00 000000000111111111111 12333 489999999 566666643 1
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
.+....+ ++++++++++ ||+.++ ++|+++++.|.+||++
T Consensus 241 --~~~~~~~----~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 241 --SWKPTWP----FEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGG 280 (300)
T ss_dssp --CCSCCCS----SCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTC
T ss_pred --chhhhcC----CCCeEEEecC-CChhhccccHHHHHHHHHHHHHh
Confidence 1222222 1379999999 999997 8999999999999975
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-25 Score=174.47 Aligned_cols=195 Identities=12% Similarity=0.025 Sum_probs=151.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD---- 100 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~---- 100 (325)
.+|.++.+..+.+. ...+|+||++||++++...|..++..|++ .||.|+++|+||+|.|.......
T Consensus 11 ~~g~~l~~~~~~p~--~~~~p~vv~~hG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 11 YDGHTFGALVGSPA--KAPAPVIVIAQDIFGVNAFMRETVSWLVD--------QGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp TTSCEECEEEECCS--SCSEEEEEEECCTTBSCHHHHHHHHHHHH--------TTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred CCCCeEEEEEECCC--CCCCCEEEEEcCCCCCCHHHHHHHHHHHh--------CCcEEEeccccccCCCcccccccchhh
Confidence 46777888877664 23578899999999999999999999987 79999999999999887532210
Q ss_pred --------CCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 101 --------PPHDIANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 101 --------~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
...+.+..++|+.++++.+. .+ +++++|||+||.+++.++.++| +++++++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~----------~~~~v~~~~~~~ 149 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNG-KVGLVGYSLGGALAFLVASKGY----------VDRAVGYYGVGL 149 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEE-EEEEEEETHHHHHHHHHHHHTC----------SSEEEEESCSSG
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCC-CEEEEEECcCHHHHHHHhccCC----------ccEEEEecCccc
Confidence 23467888999999999886 35 8999999999999999999874 677877765310
Q ss_pred CCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
. +.
T Consensus 150 ~-----------------------------------------------------------------------------~~ 152 (236)
T 1zi8_A 150 E-----------------------------------------------------------------------------KQ 152 (236)
T ss_dssp G-----------------------------------------------------------------------------GC
T ss_pred c-----------------------------------------------------------------------------cc
Confidence 0 00
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh--------HHHHHHHH
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP--------KGLLEIVA 319 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~ 319 (325)
...+..++ +|+++++|++|..++++..+.+.+.+...+. +++++++++||.+..+.+ +++.+.+.
T Consensus 153 ~~~~~~~~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~ 225 (236)
T 1zi8_A 153 LNKVPEVK--HPALFHMGGQDHFVPAPSRQLITEGFGANPL-----LQVHWYEEAGHSFARTGSSGYVASAAALANERTL 225 (236)
T ss_dssp GGGGGGCC--SCEEEEEETTCTTSCHHHHHHHHHHHTTCTT-----EEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHH
T ss_pred hhhhhhcC--CCEEEEecCCCCCCCHHHHHHHHHHHHhCCC-----ceEEEECCCCcccccCCCCccCHHHHHHHHHHHH
Confidence 11223333 7999999999999999888888887754332 999999999998887654 57889999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
+||++
T Consensus 226 ~fl~~ 230 (236)
T 1zi8_A 226 DFLVP 230 (236)
T ss_dssp HHHGG
T ss_pred HHHHH
Confidence 99975
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=186.29 Aligned_cols=231 Identities=13% Similarity=0.158 Sum_probs=151.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-------
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG------- 98 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~------- 98 (325)
+|.++.+..+.+.. ....|+||++||++++...|..+...+. .||.|+++|+||+|.|..+..
T Consensus 91 ~g~~l~~~~~~P~~-~~~~p~vv~~HG~g~~~~~~~~~~~~~~---------~G~~v~~~D~rG~g~s~~~~~~~~~~~~ 160 (346)
T 3fcy_A 91 RGARIHAKYIKPKT-EGKHPALIRFHGYSSNSGDWNDKLNYVA---------AGFTVVAMDVRGQGGQSQDVGGVTGNTL 160 (346)
T ss_dssp GGCEEEEEEEEESC-SSCEEEEEEECCTTCCSCCSGGGHHHHT---------TTCEEEEECCTTSSSSCCCCCCCSSCCS
T ss_pred CCCEEEEEEEecCC-CCCcCEEEEECCCCCCCCChhhhhHHHh---------CCcEEEEEcCCCCCCCCCCCcccCCCCc
Confidence 67789988887643 3457899999999999999998875544 899999999999998876542
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEE
Q 020518 99 ----------LDPPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVL 162 (325)
Q Consensus 99 ----------~~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli 162 (325)
....+.+....+|+.+.++.+ +.+ +++++|||+||.+++.+|.++|+ |+++|++
T Consensus 161 ~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~-~i~l~G~S~GG~la~~~a~~~p~---------v~~~vl~ 230 (346)
T 3fcy_A 161 NGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDED-RVGVMGPSQGGGLSLACAALEPR---------VRKVVSE 230 (346)
T ss_dssp BCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHSTT---------CCEEEEE
T ss_pred CcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcC-cEEEEEcCHHHHHHHHHHHhCcc---------ccEEEEC
Confidence 012334556667776666554 335 89999999999999999999985 9999999
Q ss_pred ecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcc
Q 020518 163 DSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY 242 (325)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (325)
++..... ...... ........ ....++........ ... ..+..+
T Consensus 231 ~p~~~~~---------~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~~~-------~~~---~~~~~~ 274 (346)
T 3fcy_A 231 YPFLSDY---------KRVWDL----DLAKNAYQ-------------EITDYFRLFDPRHE-------REN---EVFTKL 274 (346)
T ss_dssp SCSSCCH---------HHHHHT----TCCCGGGH-------------HHHHHHHHHCTTCT-------THH---HHHHHH
T ss_pred CCcccCH---------HHHhhc----cccccchH-------------HHHHHHHhcCCCcc-------hHH---HHHHHh
Confidence 8753211 111000 00000000 11111110000000 000 111111
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
...+....+.+++ +|+++++|++|..++++....+.+.+.. ++++++++++||..+ +++.+.+.+||
T Consensus 275 ~~~d~~~~~~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~----~~~~~~i~~fl 341 (346)
T 3fcy_A 275 GYIDVKNLAKRIK--GDVLMCVGLMDQVCPPSTVFAAYNNIQS-------KKDIKVYPDYGHEPM----RGFGDLAMQFM 341 (346)
T ss_dssp GGGCHHHHGGGCC--SEEEEEEETTCSSSCHHHHHHHHTTCCS-------SEEEEEETTCCSSCC----TTHHHHHHHHH
T ss_pred CcccHHHHHHhcC--CCEEEEeeCCCCcCCHHHHHHHHHhcCC-------CcEEEEeCCCCCcCH----HHHHHHHHHHH
Confidence 1122233344444 8999999999999999877666655542 289999999999997 67788899999
Q ss_pred hcC
Q 020518 323 ASV 325 (325)
Q Consensus 323 ~~~ 325 (325)
+++
T Consensus 342 ~~l 344 (346)
T 3fcy_A 342 LEL 344 (346)
T ss_dssp HTT
T ss_pred HHh
Confidence 764
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-24 Score=170.16 Aligned_cols=186 Identities=18% Similarity=0.183 Sum_probs=136.7
Q ss_pred cccceEEEEcccCCC-CCCCceEEEecCCC---CCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSD-RPYTSTAFVLHGLL---GSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~---~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+| .+.+..+.+... .+++|+||++||++ ++. ..|..++..|.+ .||.|+++|+||+|.|.....
T Consensus 19 ~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~~- 88 (220)
T 2fuk_A 19 VG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRE--------LGITVVRFNFRSVGTSAGSFD- 88 (220)
T ss_dssp TE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHT--------TTCEEEEECCTTSTTCCSCCC-
T ss_pred CC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHH--------CCCeEEEEecCCCCCCCCCcc-
Confidence 45 677666655432 14588999999964 322 335778888876 799999999999999987542
Q ss_pred CCCCCHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch
Q 020518 100 DPPHDIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE 175 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~ 175 (325)
.....++|+.++++.+ +.+ +++++|||+||.+++.++.++ +|+++|++++......
T Consensus 89 ----~~~~~~~d~~~~~~~l~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~----------~v~~~v~~~~~~~~~~----- 148 (220)
T 2fuk_A 89 ----HGDGEQDDLRAVAEWVRAQRPTD-TLWLAGFSFGAYVSLRAAAAL----------EPQVLISIAPPAGRWD----- 148 (220)
T ss_dssp ----TTTHHHHHHHHHHHHHHHHCTTS-EEEEEEETHHHHHHHHHHHHH----------CCSEEEEESCCBTTBC-----
T ss_pred ----cCchhHHHHHHHHHHHHhcCCCC-cEEEEEECHHHHHHHHHHhhc----------cccEEEEecccccchh-----
Confidence 2234555555555443 445 899999999999999999886 4899999998643211
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
+ ....
T Consensus 149 ------------------------------------------------------------------~---------~~~~ 153 (220)
T 2fuk_A 149 ------------------------------------------------------------------F---------SDVQ 153 (220)
T ss_dssp ------------------------------------------------------------------C---------TTCC
T ss_pred ------------------------------------------------------------------h---------hhcc
Confidence 0 0011
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+|+++++|++|..++++..+.+.+.+. + ++++++++++||+.+. +++++.+.+.+||++
T Consensus 154 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~ 214 (220)
T 2fuk_A 154 PPAQWLVIQGDADEIVDPQAVYDWLETLE--Q-----QPTLVRMPDTSHFFHR-KLIDLRGALQHGVRR 214 (220)
T ss_dssp CCSSEEEEEETTCSSSCHHHHHHHHTTCS--S-----CCEEEEETTCCTTCTT-CHHHHHHHHHHHHGG
T ss_pred cCCcEEEEECCCCcccCHHHHHHHHHHhC--c-----CCcEEEeCCCCceehh-hHHHHHHHHHHHHHH
Confidence 13689999999999999987777666652 1 2899999999999888 488999999999864
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=176.80 Aligned_cols=185 Identities=14% Similarity=0.082 Sum_probs=138.8
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEe-------------------CCCCCCCCCCCCCCCCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLV-------------------DLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~-------------------D~~G~G~S~~~~~~~~~ 102 (325)
+.+|+|||+||++++...|..++..|.+ .||.|+++ |++|+ .+..+. ..
T Consensus 21 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~--------~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~---~~ 88 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHGWAEAFAGIRS--------SHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQE---DE 88 (232)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTCC--------TTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCB---CH
T ss_pred CCCceEEEEecCCCccchHHHHHHHHhc--------CCcEEEecCCCccccccccccccccccccccC-Cccccc---cc
Confidence 4578999999999999899888887775 69999998 66666 332222 45
Q ss_pred CCHHHHHHHHHHHHHHh---CC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 HDIANAANDLANLVKAK---GW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
.++++.++++.++++.+ +. + +++++|||+||.+++.++.++|+ +++++|++++........
T Consensus 89 ~~~~~~~~~~~~~i~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~~~~~----- 154 (232)
T 1fj2_A 89 SGIKQAAENIKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ--------KLAGVTALSCWLPLRASF----- 154 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGG-GEEEEEETHHHHHHHHHHTTCSS--------CCSEEEEESCCCTTGGGS-----
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcC-CEEEEEECHHHHHHHHHHHhCCC--------ceeEEEEeecCCCCCccc-----
Confidence 67899999999999987 55 6 99999999999999999999999 999999999864221000
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
. . ....+..+ +
T Consensus 155 ------------------------------------------~--~-----------------------~~~~~~~~--~ 165 (232)
T 1fj2_A 155 ------------------------------------------P--Q-----------------------GPIGGANR--D 165 (232)
T ss_dssp ------------------------------------------C--S-----------------------SCCCSTTT--T
T ss_pred ------------------------------------------c--c-----------------------cccccccC--C
Confidence 0 0 00112222 3
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+|+++++|++|..++++..+.+.+.+..... .+++++++++++||..+.+.++++.+.|.++|.
T Consensus 166 ~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 166 ISILQCHGDCDPLVPLMFGSLTVEKLKTLVN--PANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLP 229 (232)
T ss_dssp CCEEEEEETTCSSSCHHHHHHHHHHHHHHSC--GGGEEEEEETTCCSSCCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCccCCHHHHHHHHHHHHHhCC--CCceEEEEeCCCCcccCHHHHHHHHHHHHHhcC
Confidence 7999999999999999888877777643221 012899999999999977666666666666554
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=171.89 Aligned_cols=181 Identities=11% Similarity=0.223 Sum_probs=135.1
Q ss_pred CceEEEecCCCCCCC-ChHHHHH-HHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 44 TSTAFVLHGLLGSGR-NWRSFSR-NLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~-~~~~~~~-~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
.|+|||+||++++.. .|...+. .|.+ .||+|+++|+| .|. ..+++++++++.++++.+ .
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~---~~~-------~~~~~~~~~~~~~~~~~~-~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLA--------DGVQADILNMP---NPL-------QPRLEDWLDTLSLYQHTL-H 64 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHH--------TTCEEEEECCS---CTT-------SCCHHHHHHHHHTTGGGC-C
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHh--------CCcEEEEecCC---CCC-------CCCHHHHHHHHHHHHHhc-c
Confidence 456999999999998 8988875 5765 89999999999 222 237899999999999998 6
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
+ +++++||||||.+++.+|.++|+. .+|+++|++++........
T Consensus 65 ~-~~~l~G~S~Gg~~a~~~a~~~~~~------~~v~~~v~~~~~~~~~~~~----------------------------- 108 (192)
T 1uxo_A 65 E-NTYLVAHSLGCPAILRFLEHLQLR------AALGGIILVSGFAKSLPTL----------------------------- 108 (192)
T ss_dssp T-TEEEEEETTHHHHHHHHHHTCCCS------SCEEEEEEETCCSSCCTTC-----------------------------
T ss_pred C-CEEEEEeCccHHHHHHHHHHhccc------CCccEEEEeccCCCccccc-----------------------------
Confidence 7 999999999999999999999851 1699999999764322100
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 281 (325)
.....+.. . ..+ ...+..+. +|+++|+|++|..++++..+.+.+
T Consensus 109 -------~~~~~~~~-----~---------------------~~~-~~~~~~~~--~P~l~i~g~~D~~~~~~~~~~~~~ 152 (192)
T 1uxo_A 109 -------QMLDEFTQ-----G---------------------SFD-HQKIIESA--KHRAVIASKDDQIVPFSFSKDLAQ 152 (192)
T ss_dssp -------GGGGGGTC-----S---------------------CCC-HHHHHHHE--EEEEEEEETTCSSSCHHHHHHHHH
T ss_pred -------hhhhhhhh-----c---------------------CCC-HHHHHhhc--CCEEEEecCCCCcCCHHHHHHHHH
Confidence 00000000 0 000 01222222 699999999999999988888777
Q ss_pred HhhhcCCCCCCceeEEEecCCCccccccChHH---HHHHHHHHHhc
Q 020518 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG---LLEIVAPRIAS 324 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~---~~~~i~~fl~~ 324 (325)
.+ + +++++++++||+++.++|++ +.+.|.+|++.
T Consensus 153 ~~-~--------~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 153 QI-D--------AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp HT-T--------CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred hc-C--------ceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 76 4 89999999999999998754 57777787753
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-25 Score=172.26 Aligned_cols=182 Identities=19% Similarity=0.199 Sum_probs=141.9
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC-------------------CCCCCCCCCCCCCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR-------------------NHGRSAEIEGLDPP 102 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~-------------------G~G~S~~~~~~~~~ 102 (325)
+.+|+|||+||++++...|..++..|.+.. .||+|+++|+| |+|.+... ..
T Consensus 12 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~------~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~----~~ 81 (218)
T 1auo_A 12 PADACVIWLHGLGADRYDFMPVAEALQESL------LTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI----SL 81 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHTTC------TTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE----CH
T ss_pred CCCcEEEEEecCCCChhhHHHHHHHHhhcC------CceEEEeCCCCCccccCCCCCcccceecCcCCCccccc----ch
Confidence 357899999999999999999999998522 58999998766 44443221 35
Q ss_pred CCHHHHHHHHHHHHHHh---C--CCCCEEEEEeChhHHHHHHHHH-HccccccCCccCCcceEEEEecCCCCCCCCCchh
Q 020518 103 HDIANAANDLANLVKAK---G--WDWPDVVIGHSMGGKVALHFAQ-SCARADYGQFVALPKQLWVLDSVPGKVKTENSEG 176 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~---~--~~~~~~lvGhS~Gg~~a~~~a~-~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~ 176 (325)
.++++.++++..+++.+ + .+ +++++|||+||.+++.+|. ++|+ +++++|++++.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~--------~~~~~v~~~~~~~~~------- 145 (218)
T 1auo_A 82 EELEVSAKMVTDLIEAQKRTGIDAS-RIFLAGFSQGGAVVFHTAFINWQG--------PLGGVIALSTYAPTF------- 145 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGG-GEEEEEETHHHHHHHHHHHTTCCS--------CCCEEEEESCCCTTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcc-cEEEEEECHHHHHHHHHHHhcCCC--------CccEEEEECCCCCCc-------
Confidence 67888899999999887 4 34 8999999999999999999 9999 999999999864220
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
..... . .... .
T Consensus 146 ----------~~~~~----------------------------------------~-----------------~~~~--~ 156 (218)
T 1auo_A 146 ----------GDELE----------------------------------------L-----------------SASQ--Q 156 (218)
T ss_dssp ----------CTTCC----------------------------------------C-----------------CHHH--H
T ss_pred ----------hhhhh----------------------------------------h-----------------hhcc--c
Confidence 00000 0 0011 1
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
++|+++++|++|..++++..+.+.+.++..+. ++++++++ +||..+.+.++++.+.|.++|.
T Consensus 157 ~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~----~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGV----TVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTC----CEEEEEES-CSSSCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCceecHHHHHHHHHHHHhCCC----ceEEEEec-CCCccCHHHHHHHHHHHHHHhC
Confidence 37999999999999999888888888875432 28999999 9999999988888888888763
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=173.26 Aligned_cols=206 Identities=13% Similarity=0.087 Sum_probs=149.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC------
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL------ 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~------ 99 (325)
++..+.+..+.+.......|+||++||++++...|..++..|++ .||.|+++|+||+|.+......
T Consensus 14 ~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~~~~~~~~~~~~~~ 85 (241)
T 3f67_A 14 QGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQ--------EGYLAIAPELYFRQGDPNEYHDIPTLFK 85 (241)
T ss_dssp TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHHHHHHHHHH--------TTCEEEEECTTTTTCCGGGCCSHHHHHH
T ss_pred CCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHHHHHHHHHH--------CCcEEEEecccccCCCCCchhhHHHHHH
Confidence 56778777776654434578999999999999889999999987 8999999999999877654320
Q ss_pred --CCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 100 --DPPHDIANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 100 --~~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
....+..+.++|+.++++.+. .+ +++++||||||.+++.++.++|+ +.+++++.+........
T Consensus 86 ~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~-~i~l~G~S~Gg~~a~~~a~~~~~---------~~~~v~~~~~~~~~~~~ 155 (241)
T 3f67_A 86 ELVSKVPDAQVLADLDHVASWAARHGGDAH-RLLITGFCWGGRITWLYAAHNPQ---------LKAAVAWYGKLVGEKSL 155 (241)
T ss_dssp HTGGGSCHHHHHHHHHHHHHHHHTTTEEEE-EEEEEEETHHHHHHHHHHTTCTT---------CCEEEEESCCCSCCCCS
T ss_pred HhhhcCCchhhHHHHHHHHHHHHhccCCCC-eEEEEEEcccHHHHHHHHhhCcC---------cceEEEEeccccCCCcc
Confidence 012345677888888887763 34 79999999999999999999886 67777665442111000
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
+...+....+.
T Consensus 156 ---------------------------------------------------------------------~~~~~~~~~~~ 166 (241)
T 3f67_A 156 ---------------------------------------------------------------------NSPKHPVDIAV 166 (241)
T ss_dssp ---------------------------------------------------------------------SSCCCHHHHGG
T ss_pred ---------------------------------------------------------------------CCccCHHHhhh
Confidence 00000001122
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc--------ChHHHHHHHHHHHhc
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD--------NPKGLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e--------~p~~~~~~i~~fl~~ 324 (325)
.++ +|+++++|++|..++++..+.+.+.+...+. ++++++++++||.+..+ ..+++.+.+.+||++
T Consensus 167 ~~~--~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 167 DLN--APVLGLYGAKDASIPQDTVETMRQALRAANA----TAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp GCC--SCEEEEEETTCTTSCHHHHHHHHHHHHHTTC----SEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred hcC--CCEEEEEecCCCCCCHHHHHHHHHHHHHcCC----CcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 233 7999999999999999888888888765332 39999999999988643 346788899999975
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-24 Score=173.92 Aligned_cols=223 Identities=8% Similarity=0.054 Sum_probs=137.8
Q ss_pred cccceEEEEcccC-----CCCCCCceEEEecC---CCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSS-----SDRPYTSTAFVLHG---LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE 97 (325)
Q Consensus 26 ~~~~l~y~~~~~~-----~~~~~~~~vv~~HG---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 97 (325)
++..+.+..+.+. ......|+||++|| ..++...|..++..|++ .||.|+++|+||+|.+..
T Consensus 12 ~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~~~~-- 81 (277)
T 3bxp_A 12 AAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMA--------AGMHTVVLNYQLIVGDQS-- 81 (277)
T ss_dssp TTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHH--------TTCEEEEEECCCSTTTCC--
T ss_pred CCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHH--------CCCEEEEEecccCCCCCc--
Confidence 4556666666554 12346789999999 66777889999999987 899999999999994433
Q ss_pred CCCCCCCHHHHHHHHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHcccccc------CCccCCcceEEEEecCC
Q 020518 98 GLDPPHDIANAANDLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADY------GQFVALPKQLWVLDSVP 166 (325)
Q Consensus 98 ~~~~~~~~~~~~~~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~------~~~~~~v~~lvli~~~~ 166 (325)
. .....++..+.+..+.+. ++ .+ +++++||||||.+|+.++.++++... .....+++++|++++..
T Consensus 82 ~--~~~~~~d~~~~~~~l~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~ 158 (277)
T 3bxp_A 82 V--YPWALQQLGATIDWITTQASAHHVDCQ-RIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVI 158 (277)
T ss_dssp C--TTHHHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCC
T ss_pred c--CchHHHHHHHHHHHHHhhhhhcCCChh-heEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcc
Confidence 1 233334443333333332 23 35 89999999999999999998632000 00011899999998764
Q ss_pred CCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHH-HHHhhcccCCCcccccccChhHHHHhhhcccCC
Q 020518 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLS-EWIGTNLKKSGERETWAFNLDGAVQMFNSYREM 245 (325)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (325)
........ . .... .++. .....
T Consensus 159 ~~~~~~~~--------------------~-------------~~~~~~~~~------------------------~~~~~ 181 (277)
T 3bxp_A 159 DLTAGFPT--------------------T-------------SAARNQITT------------------------DARLW 181 (277)
T ss_dssp BTTSSSSS--------------------S-------------HHHHHHHCS------------------------CGGGS
T ss_pred cCCCCCCC--------------------c-------------cccchhccc------------------------hhhhc
Confidence 32111000 0 0000 0000 00000
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC---------------
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN--------------- 310 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~--------------- 310 (325)
+....+... .+|+++++|++|..++++..+.+.+.++..+. ++++++++++||.+....
T Consensus 182 ~~~~~~~~~--~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~ 255 (277)
T 3bxp_A 182 AAQRLVTPA--SKPAFVWQTATDESVPPINSLKYVQAMLQHQV----ATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQ 255 (277)
T ss_dssp BGGGGCCTT--SCCEEEEECTTCCCSCTHHHHHHHHHHHHTTC----CEEEEECCCC----------------CHHHHHH
T ss_pred CHhhccccC--CCCEEEEeeCCCCccChHHHHHHHHHHHHCCC----eEEEEEeCCCCcccccccccccCccccccccch
Confidence 111112222 36999999999999999888888887766433 389999999999655544
Q ss_pred hHHHHHHHHHHHhc
Q 020518 311 PKGLLEIVAPRIAS 324 (325)
Q Consensus 311 p~~~~~~i~~fl~~ 324 (325)
++++.+.+.+||++
T Consensus 256 ~~~~~~~~~~fl~~ 269 (277)
T 3bxp_A 256 AAIWPQLALRWLQE 269 (277)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 47888899999864
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-25 Score=189.07 Aligned_cols=249 Identities=13% Similarity=0.058 Sum_probs=149.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHH-HHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSR-NLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++..+....+.+. .+..|+|||+||++++...|..... .+.+ .||+|+++|+||+|.|..... .+.
T Consensus 143 ~~~~l~~~~~~~~--~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~--------~g~~vi~~D~~G~G~s~~~~~---~~~ 209 (405)
T 3fnb_A 143 EGELLPGYAIISE--DKAQDTLIVVGGGDTSREDLFYMLGYSGWE--------HDYNVLMVDLPGQGKNPNQGL---HFE 209 (405)
T ss_dssp TTEEEEEEEECCS--SSCCCEEEEECCSSCCHHHHHHHTHHHHHH--------TTCEEEEECCTTSTTGGGGTC---CCC
T ss_pred CCeEEEEEEEcCC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHh--------CCcEEEEEcCCCCcCCCCCCC---CCC
Confidence 3455554444322 2345899999999999888876553 3333 899999999999999964431 222
Q ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 105 IANAANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
. ++.+|+.++++.+.. + +++|+||||||.+++.+|.++| +|+++|++++..... ......+
T Consensus 210 ~-~~~~d~~~~~~~l~~~~~-~v~l~G~S~GG~~a~~~a~~~p---------~v~~~v~~~p~~~~~------~~~~~~~ 272 (405)
T 3fnb_A 210 V-DARAAISAILDWYQAPTE-KIAIAGFSGGGYFTAQAVEKDK---------RIKAWIASTPIYDVA------EVFRISF 272 (405)
T ss_dssp S-CTHHHHHHHHHHCCCSSS-CEEEEEETTHHHHHHHHHTTCT---------TCCEEEEESCCSCHH------HHHHHHC
T ss_pred c-cHHHHHHHHHHHHHhcCC-CEEEEEEChhHHHHHHHHhcCc---------CeEEEEEecCcCCHH------HHHHHhh
Confidence 2 457777777777765 6 9999999999999999999987 599999988764321 0000000
Q ss_pred HHhhcCCCCCCcHHHHHHHHHh--hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMME--LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
......+. .....+.. ..........+.... +.+........+..+........+..++ +|+
T Consensus 273 ~~~~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pv 336 (405)
T 3fnb_A 273 STALKAPK------TILKWGSKLVTSVNKVAEVNLNKYA--------WQFGQVDFITSVNEVLEQAQIVDYNKID--VPS 336 (405)
T ss_dssp C------------------------CCCHHHHHHHHHHH--------HHHTSSSHHHHHHHHHHHCCCCCGGGCC--SCE
T ss_pred hhhhhCcH------HHHHHHHHHhhccchhHHHHHHHhh--------hhcCCCCHHHHHHHHHHhhcccCHhhCC--CCE
Confidence 00000000 00000000 000000000000000 0000000001111100001111134444 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEe---cCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVL---PNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|+|++|..++++..+.+.+.+++.+. +++++++ +++||.++.++|+.+++.|.+||++
T Consensus 337 Lii~G~~D~~v~~~~~~~l~~~l~~~~~----~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~ 399 (405)
T 3fnb_A 337 LFLVGAGEDSELMRQSQVLYDNFKQRGI----DVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNH 399 (405)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHHHHTTC----CEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHH
T ss_pred EEEecCCCcCCChHHHHHHHHHhccCCC----CceEEEEcCCccchhccccchHHHHHHHHHHHHHH
Confidence 9999999999998888888888876432 3889999 7777889999999999999999975
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=176.50 Aligned_cols=208 Identities=13% Similarity=0.164 Sum_probs=142.1
Q ss_pred CCCceEEEecCCC-----CCCCChHHHHHHH----HhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 020518 42 PYTSTAFVLHGLL-----GSGRNWRSFSRNL----ASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL 112 (325)
Q Consensus 42 ~~~~~vv~~HG~~-----~~~~~~~~~~~~l----~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l 112 (325)
+.+|+|||+||.+ ++...|..++..| .+ .||+|+++|+|+.+.+. ....++++++.+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~--------~g~~vi~~d~r~~~~~~------~~~~~~d~~~~~ 104 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTE--------STVCQYSIEYRLSPEIT------NPRNLYDAVSNI 104 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTT--------CCEEEEEECCCCTTTSC------TTHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhcc--------CCcEEEEeecccCCCCC------CCcHHHHHHHHH
Confidence 4578999999955 3567889999888 33 89999999999876542 245677888888
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-----------------cccccCCccCCcceEEEEecCCCCCCCCCch
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-----------------ARADYGQFVALPKQLWVLDSVPGKVKTENSE 175 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-----------------p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~ 175 (325)
..++++++.+ +++|+||||||.+|+.++.++ |+ +|+++|++++....
T Consensus 105 ~~l~~~~~~~-~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~--------~v~~~v~~~~~~~~------- 168 (273)
T 1vkh_A 105 TRLVKEKGLT-NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQ--------IVKRVFLLDGIYSL------- 168 (273)
T ss_dssp HHHHHHHTCC-CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHT--------TEEEEEEESCCCCH-------
T ss_pred HHHHHhCCcC-cEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCc--------ccceeeeecccccH-------
Confidence 8888888888 999999999999999999986 66 89999999875321
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
....... .....+. ...+.. . ...+............ .....+
T Consensus 169 ---~~~~~~~-------~~~~~~~------------~~~~~~----~--~~~~~~~~~~~~~~~~--------~~~~~~- 211 (273)
T 1vkh_A 169 ---KELLIEY-------PEYDCFT------------RLAFPD----G--IQMYEEEPSRVMPYVK--------KALSRF- 211 (273)
T ss_dssp ---HHHHHHC-------GGGHHHH------------HHHCTT----C--GGGCCCCHHHHHHHHH--------HHHHHH-
T ss_pred ---HHhhhhc-------ccHHHHH------------HHHhcc----c--ccchhhcccccChhhh--------hccccc-
Confidence 0000000 0000000 000000 0 0000000000000000 001112
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.+|+++|+|++|..++++..+.+.+.++..+. ++++++++++||..++++ +++.+.|.+||
T Consensus 212 -~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 212 -SIDMHLVHSYSDELLTLRQTNCLISCLQDYQL----SFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp -TCEEEEEEETTCSSCCTHHHHHHHHHHHHTTC----CEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred -CCCEEEEecCCcCCCChHHHHHHHHHHHhcCC----ceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 37999999999999999988888888876433 389999999999999998 89999999987
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-25 Score=180.91 Aligned_cols=224 Identities=11% Similarity=0.034 Sum_probs=141.5
Q ss_pred cccceEEEEcccCC-----CCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC--C
Q 020518 26 SLQTLAYEEVRSSS-----DRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA--E 95 (325)
Q Consensus 26 ~~~~l~y~~~~~~~-----~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~--~ 95 (325)
++..+.+..+ +.. .....|+||++||.+ ++...|..++..|++ .||.|+++|+||+|.+. .
T Consensus 28 ~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~~~~~~~~ 98 (283)
T 3bjr_A 28 TATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAG--------HGYQAFYLEYTLLTDQQPLG 98 (283)
T ss_dssp TTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHT--------TTCEEEEEECCCTTTCSSCB
T ss_pred CCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHh--------CCcEEEEEeccCCCccccCc
Confidence 4566677666 433 335678999999954 344568888888886 89999999999999873 2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHcccccc-----CCccCCcceEEEEecCCCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADY-----GQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~-----~~~~~~v~~lvli~~~~~~ 168 (325)
+. ...+..+.++.+.+..+.+++ + +++++||||||.+|+.++.++|+... .....+++++|++++....
T Consensus 99 ~~---~~~d~~~~~~~l~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~ 174 (283)
T 3bjr_A 99 LA---PVLDLGRAVNLLRQHAAEWHIDPQ-QITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISP 174 (283)
T ss_dssp TH---HHHHHHHHHHHHHHSHHHHTEEEE-EEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCT
T ss_pred hh---HHHHHHHHHHHHHHHHHHhCCCcc-cEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccc
Confidence 11 111222233333333333343 4 89999999999999999999997000 0000028999998876432
Q ss_pred CCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccc
Q 020518 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYW 248 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
.... . ... ..+...+. .....+..
T Consensus 175 ~~~~------~--------------~~~----------------~~~~~~~~--------------------~~~~~~~~ 198 (283)
T 3bjr_A 175 LLGF------P--------------KDD----------------ATLATWTP--------------------TPNELAAD 198 (283)
T ss_dssp TSBC--------------------------------------------CCCC--------------------CGGGGCGG
T ss_pred cccc------c--------------ccc----------------chHHHHHH--------------------HhHhcCHH
Confidence 1110 0 000 00000000 00001111
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-------------HHHH
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-------------KGLL 315 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-------------~~~~ 315 (325)
..+..+ .+|+++++|++|..++++..+.+.+.++..+. ++++++++++||.+..+.| +++.
T Consensus 199 ~~~~~~--~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 272 (283)
T 3bjr_A 199 QHVNSD--NQPTFIWTTADDPIVPATNTLAYATALATAKI----PYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWL 272 (283)
T ss_dssp GSCCTT--CCCEEEEEESCCTTSCTHHHHHHHHHHHHTTC----CEEEEEECCCSHHHHHHHHHHSCC-------CCHHH
T ss_pred HhccCC--CCCEEEEEcCCCCCCChHHHHHHHHHHHHCCC----CeEEEEeCCCCcccccccccccccccccchhHHHHH
Confidence 122333 37999999999999999888888888776432 2799999999998777665 7899
Q ss_pred HHHHHHHhc
Q 020518 316 EIVAPRIAS 324 (325)
Q Consensus 316 ~~i~~fl~~ 324 (325)
+.+.+||++
T Consensus 273 ~~i~~fl~~ 281 (283)
T 3bjr_A 273 TLALEWLAD 281 (283)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999975
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-24 Score=170.30 Aligned_cols=180 Identities=19% Similarity=0.268 Sum_probs=138.6
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC-------------------CCCCCCCCCCCCCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR-------------------NHGRSAEIEGLDPP 102 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~-------------------G~G~S~~~~~~~~~ 102 (325)
+.+|+|||+||++++...|..++..|++.. .||.|+++|+| |+|.+... ..
T Consensus 22 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~------~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~----~~ 91 (226)
T 3cn9_A 22 NADACIIWLHGLGADRTDFKPVAEALQMVL------PSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI----DE 91 (226)
T ss_dssp TCCEEEEEECCTTCCGGGGHHHHHHHHHHC------TTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB----CH
T ss_pred CCCCEEEEEecCCCChHHHHHHHHHHhhcC------CCcEEEeecCCCCccccCCCCccccccccccccccccc----cc
Confidence 357899999999999999999999998532 68999998776 66644322 45
Q ss_pred CCHHHHHHHHHHHHHHh---CCC-CCEEEEEeChhHHHHHHHHH-HccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 HDIANAANDLANLVKAK---GWD-WPDVVIGHSMGGKVALHFAQ-SCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~---~~~-~~~~lvGhS~Gg~~a~~~a~-~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
.++++.++++..+++.+ +++ .+++++||||||.+++.+|. ++|+ +++++|++++......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--------~~~~~v~~~~~~~~~~------- 156 (226)
T 3cn9_A 92 DQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQ--------PLGGVLALSTYAPTFD------- 156 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSS--------CCSEEEEESCCCGGGG-------
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCcc--------CcceEEEecCcCCCch-------
Confidence 67889999999999887 542 28999999999999999999 9999 9999999997532100
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
. + . +. ... .+
T Consensus 157 --------------------------------~---~---~-----------------------~~-------~~~--~~ 166 (226)
T 3cn9_A 157 --------------------------------D---L---A-----------------------LD-------ERH--KR 166 (226)
T ss_dssp --------------------------------G---C---C-----------------------CC-------TGG--GG
T ss_pred --------------------------------h---h---h-----------------------hc-------ccc--cC
Confidence 0 0 0 00 011 23
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
+|+++++|++|..++++..+.+.+.++..+. ++++++++ +||+++.+.++++.+.|.++
T Consensus 167 ~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~----~~~~~~~~-~gH~~~~~~~~~i~~~l~~~ 225 (226)
T 3cn9_A 167 IPVLHLHGSQDDVVDPALGRAAHDALQAQGV----EVGWHDYP-MGHEVSLEEIHDIGAWLRKR 225 (226)
T ss_dssp CCEEEEEETTCSSSCHHHHHHHHHHHHHTTC----CEEEEEES-CCSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCccCHHHHHHHHHHHHHcCC----ceeEEEec-CCCCcchhhHHHHHHHHHhh
Confidence 7999999999999999988888888876432 28999999 99999887776665555544
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=175.67 Aligned_cols=179 Identities=17% Similarity=0.181 Sum_probs=134.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEe--CCCCCCCCCCCCCC-CCCCC---HHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLV--DLRNHGRSAEIEGL-DPPHD---IANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~--D~~G~G~S~~~~~~-~~~~~---~~~~~~~l~~~ 115 (325)
..+|+|||+||++++...|..++..|+ ++|.|+++ |++|+|.|...... ...++ +.+.++++.++
T Consensus 60 ~~~p~vv~~HG~~~~~~~~~~~~~~l~---------~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDENQFFDFGARLL---------PQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADF 130 (251)
T ss_dssp TTSCEEEEECCTTCCHHHHHHHHHHHS---------TTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHhHHHHHHHhcC---------CCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHH
Confidence 357999999999999999999998888 56999999 89999987532110 01233 33345565555
Q ss_pred HHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 020518 116 VKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191 (325)
Q Consensus 116 l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (325)
++.+ +.+ +++++||||||.+++.+|.++|+ +++++|++++......
T Consensus 131 l~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~--------~v~~~v~~~~~~~~~~--------------------- 180 (251)
T 2r8b_A 131 IKANREHYQAG-PVIGLGFSNGANILANVLIEQPE--------LFDAAVLMHPLIPFEP--------------------- 180 (251)
T ss_dssp HHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHSTT--------TCSEEEEESCCCCSCC---------------------
T ss_pred HHHHHhccCCC-cEEEEEECHHHHHHHHHHHhCCc--------ccCeEEEEecCCCccc---------------------
Confidence 5544 778 99999999999999999999999 9999999998643210
Q ss_pred CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
...... .++|+++++|++|..+
T Consensus 181 --------------------------------------------------------~~~~~~--~~~P~li~~g~~D~~~ 202 (251)
T 2r8b_A 181 --------------------------------------------------------KISPAK--PTRRVLITAGERDPIC 202 (251)
T ss_dssp --------------------------------------------------------CCCCCC--TTCEEEEEEETTCTTS
T ss_pred --------------------------------------------------------cccccc--cCCcEEEeccCCCccC
Confidence 000011 2379999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEE-EecCCCccccccChHHHHHHHHHHHh
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVH-VLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+++..+.+.+.++..+ .++. .++++||.++.+.++.+.+.|.++|.
T Consensus 203 ~~~~~~~~~~~l~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 203 PVQLTKALEESLKAQG------GTVETVWHPGGHEIRSGEIDAVRGFLAAYGG 249 (251)
T ss_dssp CHHHHHHHHHHHHHHS------SEEEEEEESSCSSCCHHHHHHHHHHHGGGC-
T ss_pred CHHHHHHHHHHHHHcC------CeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Confidence 9988888888887422 4444 78888999988888877777766653
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-25 Score=181.78 Aligned_cols=173 Identities=14% Similarity=0.082 Sum_probs=133.6
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-----HHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLAN-----LVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~-----~l~ 117 (325)
..|+|||+||++++...|..+.+.|.+ .||.|+++|+||+|.|.... ..++...++.+.+ +..
T Consensus 95 ~~p~vv~~HG~~~~~~~~~~~~~~la~--------~G~~vv~~d~~g~g~s~~~~----~~d~~~~~~~l~~~~~~~~~~ 162 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIAWLGERIAS--------HGFVVIAIDTNTTLDQPDSR----ARQLNAALDYMLTDASSAVRN 162 (306)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHT--------TTEEEEEECCSSTTCCHHHH----HHHHHHHHHHHHHTSCHHHHT
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHh--------CCCEEEEecCCCCCCCcchH----HHHHHHHHHHHHhhcchhhhc
Confidence 478899999999999999999999997 89999999999999875421 1112222222222 112
Q ss_pred HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHH
Q 020518 118 AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKW 197 (325)
Q Consensus 118 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (325)
.++.+ +++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 163 ~~~~~-~v~l~G~S~GG~~a~~~a~~~p~---------v~~~v~~~~~~~------------------------------ 202 (306)
T 3vis_A 163 RIDAS-RLAVMGHSMGGGGTLRLASQRPD---------LKAAIPLTPWHL------------------------------ 202 (306)
T ss_dssp TEEEE-EEEEEEETHHHHHHHHHHHHCTT---------CSEEEEESCCCS------------------------------
T ss_pred cCCcc-cEEEEEEChhHHHHHHHHhhCCC---------eeEEEEeccccC------------------------------
Confidence 23456 89999999999999999999985 899999987532
Q ss_pred HHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChH-HH
Q 020518 198 LVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPD-VI 276 (325)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~ 276 (325)
...+..++ +|+++++|++|..++++ ..
T Consensus 203 --------------------------------------------------~~~~~~~~--~P~lii~G~~D~~~~~~~~~ 230 (306)
T 3vis_A 203 --------------------------------------------------NKSWRDIT--VPTLIIGAEYDTIASVTLHS 230 (306)
T ss_dssp --------------------------------------------------CCCCTTCC--SCEEEEEETTCSSSCTTTTH
T ss_pred --------------------------------------------------ccccccCC--CCEEEEecCCCcccCcchhH
Confidence 01122333 79999999999999987 47
Q ss_pred HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 277 QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.+.+.++..+. +++++++++||+.+.+.++++.+.+.+||++
T Consensus 231 ~~~~~~l~~~~~-----~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~ 273 (306)
T 3vis_A 231 KPFYNSIPSPTD-----KAYLELDGASHFAPNITNKTIGMYSVAWLKR 273 (306)
T ss_dssp HHHHHTCCTTSC-----EEEEEETTCCTTGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCC-----ceEEEECCCCccchhhchhHHHHHHHHHHHH
Confidence 777776665332 8899999999999999999999999999974
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=175.47 Aligned_cols=203 Identities=12% Similarity=0.112 Sum_probs=146.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
++..+.+..+.+.. +.+|+|||+||.+ ++...|..++..|.+ .||+|+++|+||+|.
T Consensus 47 ~~~~~~~~~~~p~~--~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~~~~~---------- 106 (262)
T 2pbl_A 47 EGDRHKFDLFLPEG--TPVGLFVFVHGGYWMAFDKSSWSHLAVGALS--------KGWAVAMPSYELCPE---------- 106 (262)
T ss_dssp SSTTCEEEEECCSS--SCSEEEEEECCSTTTSCCGGGCGGGGHHHHH--------TTEEEEEECCCCTTT----------
T ss_pred CCCCceEEEEccCC--CCCCEEEEEcCcccccCChHHHHHHHHHHHh--------CCCEEEEeCCCCCCC----------
Confidence 45566776665532 4688999999953 777889999998887 899999999998753
Q ss_pred CCHHHHHHHHHHHHHHhCC---CCCEEEEEeChhHHHHHHHHHHc------cccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 103 HDIANAANDLANLVKAKGW---DWPDVVIGHSMGGKVALHFAQSC------ARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~------p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
.++.++++|+.++++.+.. + +++|+||||||.+++.++.++ |+ +|+++|++++.......
T Consensus 107 ~~~~~~~~d~~~~~~~l~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~--------~v~~~vl~~~~~~~~~~-- 175 (262)
T 2pbl_A 107 VRISEITQQISQAVTAAAKEIDG-PIVLAGHSAGGHLVARMLDPEVLPEAVGA--------RIRNVVPISPLSDLRPL-- 175 (262)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCS-CEEEEEETHHHHHHHHTTCTTTSCHHHHT--------TEEEEEEESCCCCCGGG--
T ss_pred CChHHHHHHHHHHHHHHHHhccC-CEEEEEECHHHHHHHHHhccccccccccc--------cceEEEEecCccCchHH--
Confidence 4577888888888876643 5 999999999999999999988 77 99999999986432100
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
.. .. ....+. ........ . .....+..
T Consensus 176 -----------~~----~~------------------~~~~~~-------------~~~~~~~~----~---~~~~~~~~ 202 (262)
T 2pbl_A 176 -----------LR----TS------------------MNEKFK-------------MDADAAIA----E---SPVEMQNR 202 (262)
T ss_dssp -----------GG----ST------------------THHHHC-------------CCHHHHHH----T---CGGGCCCC
T ss_pred -----------Hh----hh------------------hhhhhC-------------CCHHHHHh----c---CcccccCC
Confidence 00 00 000000 00000000 0 00111223
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+ .+|+++++|++|..++++..+.+.+.++ +++++++++||+.++|.|++.+..|.+++.
T Consensus 203 ~--~~P~lii~G~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 203 Y--DAKVTVWVGGAERPAFLDQAIWLVEAWD---------ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp C--SCEEEEEEETTSCHHHHHHHHHHHHHHT---------CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred C--CCCEEEEEeCCCCcccHHHHHHHHHHhC---------CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 3 3899999999999888888877777765 589999999999999999998888888774
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=167.69 Aligned_cols=187 Identities=13% Similarity=0.054 Sum_probs=122.1
Q ss_pred CceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 44 TSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
.|+|||+|||.++...|.. +...+.+.. .+|+|+++|+||||. +.++++..+++....
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~------~~~~v~~pdl~~~g~--------------~~~~~l~~~~~~~~~ 61 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHH------PHIEMQIPQLPPYPA--------------EAAEMLESIVMDKAG 61 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHC------TTSEEECCCCCSSHH--------------HHHHHHHHHHHHHTT
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcC------CCcEEEEeCCCCCHH--------------HHHHHHHHHHHhcCC
Confidence 4799999999998887753 445555432 579999999999874 467788888999988
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
+ +++|+||||||.+|+.+|.++|. .+..++...++. .........
T Consensus 62 ~-~i~l~G~SmGG~~a~~~a~~~~~--------~~~~~~~~~~~~-------------~~~~~~~~~------------- 106 (202)
T 4fle_A 62 Q-SIGIVGSSLGGYFATWLSQRFSI--------PAVVVNPAVRPF-------------ELLSDYLGE------------- 106 (202)
T ss_dssp S-CEEEEEETHHHHHHHHHHHHTTC--------CEEEESCCSSHH-------------HHGGGGCEE-------------
T ss_pred C-cEEEEEEChhhHHHHHHHHHhcc--------cchheeeccchH-------------HHHHHhhhh-------------
Confidence 8 99999999999999999999998 555544332210 000000000
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 281 (325)
.... .....+............ ....... .++|+|+|+|++|+++|++.+..
T Consensus 107 ----------------~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~P~LiihG~~D~~Vp~~~s~~--- 158 (202)
T 4fle_A 107 ----------------NQNP-YTGQKYVLESRHIYDLKA------MQIEKLE--SPDLLWLLQQTGDEVLDYRQAVA--- 158 (202)
T ss_dssp ----------------EECT-TTCCEEEECHHHHHHHHT------TCCSSCS--CGGGEEEEEETTCSSSCHHHHHH---
T ss_pred ----------------hccc-cccccccchHHHHHHHHh------hhhhhhc--cCceEEEEEeCCCCCCCHHHHHH---
Confidence 0000 000000000111111100 0111222 34899999999999999976644
Q ss_pred HhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+.++ +++.+++|+||. +++++++.+.|.+||+
T Consensus 159 l~~~--------~~l~i~~g~~H~--~~~~~~~~~~I~~FL~ 190 (202)
T 4fle_A 159 YYTP--------CRQTVESGGNHA--FVGFDHYFSPIVTFLG 190 (202)
T ss_dssp HTTT--------SEEEEESSCCTT--CTTGGGGHHHHHHHHT
T ss_pred HhhC--------CEEEEECCCCcC--CCCHHHHHHHHHHHHh
Confidence 4444 899999999996 3677889999999996
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=9e-23 Score=173.72 Aligned_cols=120 Identities=13% Similarity=0.000 Sum_probs=96.1
Q ss_pred cccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+|..+.+..+.+... ....|+||++||++++...|.. +...|++ .||.|+++|+||+|.|..... ...
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~~~--~~~ 146 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAE--------RGFVTLAFDPSYTGESGGQPR--NVA 146 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHH--------TTCEEEEECCTTSTTSCCSSS--SCC
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHH--------CCCEEEEECCCCcCCCCCcCc--ccc
Confidence 467788776655331 2456889999999999999975 7888887 899999999999999986543 334
Q ss_pred CHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 104 DIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+....++|+.++++.+ +.+ +++++|||+||.+++.+|.++| +|+++|++++.
T Consensus 147 ~~~~~~~d~~~~~~~l~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p---------~~~~~v~~~p~ 204 (367)
T 2hdw_A 147 SPDINTEDFSAAVDFISLLPEVNRE-RIGVIGICGWGGMALNAVAVDK---------RVKAVVTSTMY 204 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTEEEE-EEEEEEETHHHHHHHHHHHHCT---------TCCEEEEESCC
T ss_pred chhhHHHHHHHHHHHHHhCcCCCcC-cEEEEEECHHHHHHHHHHhcCC---------CccEEEEeccc
Confidence 4677888887777765 245 8999999999999999999988 49999999854
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=162.85 Aligned_cols=187 Identities=12% Similarity=0.097 Sum_probs=133.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeC-------------CCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD-------------LRNHGRS 93 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D-------------~~G~G~S 93 (325)
|..+.|....+. ++..| |||+||++++...|..+++.|. .++.|+++| ++|+|.+
T Consensus 2 G~~~~~~~~~~~--~~~~p-vv~lHG~g~~~~~~~~~~~~l~---------~~~~v~~~~~~~~~~g~~~~~~~~g~g~~ 69 (209)
T 3og9_A 2 GHMTDYVFKAGR--KDLAP-LLLLHSTGGDEHQLVEIAEMIA---------PSHPILSIRGRINEQGVNRYFKLRGLGGF 69 (209)
T ss_dssp --CCCEEEECCC--TTSCC-EEEECCTTCCTTTTHHHHHHHS---------TTCCEEEECCSBCGGGCCBSSCBCSCTTC
T ss_pred CCcceEEEeCCC--CCCCC-EEEEeCCCCCHHHHHHHHHhcC---------CCceEEEecCCcCCCCcccceeccccccc
Confidence 344555544332 23466 9999999999999999998888 689999999 7777765
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHH----HhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 94 AEIEGLDPPHDIANAANDLANLVK----AKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~----~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..... ....+.+.++++.++++ ..++ + +++++||||||.+++.+|.++|+ +++++|++++...
T Consensus 70 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~l~G~S~Gg~~a~~~a~~~~~--------~~~~~v~~~~~~~ 138 (209)
T 3og9_A 70 TKENF--DLESLDEETDWLTDEVSLLAEKHDLDVH-KMIAIGYSNGANVALNMFLRGKI--------NFDKIIAFHGMQL 138 (209)
T ss_dssp SGGGB--CHHHHHHHHHHHHHHHHHHHHHHTCCGG-GCEEEEETHHHHHHHHHHHTTSC--------CCSEEEEESCCCC
T ss_pred ccCCC--CHHHHHHHHHHHHHHHHHHHHhcCCCcc-eEEEEEECHHHHHHHHHHHhCCc--------ccceEEEECCCCC
Confidence 44321 22344555555555554 4455 6 89999999999999999999999 9999999987532
Q ss_pred CCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
....
T Consensus 139 ~~~~---------------------------------------------------------------------------- 142 (209)
T 3og9_A 139 EDFE---------------------------------------------------------------------------- 142 (209)
T ss_dssp CCCC----------------------------------------------------------------------------
T ss_pred Cccc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.... ...+|+++++|++|..++++..+.+.+.+...+. ++++++++ +||.+..+ ..+.+.+||++
T Consensus 143 -~~~~--~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~----~~~~~~~~-~gH~~~~~----~~~~~~~~l~~ 207 (209)
T 3og9_A 143 -QTVQ--LDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGC----QLEIYESS-LGHQLTQE----EVLAAKKWLTE 207 (209)
T ss_dssp -CCCC--CTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTC----EEEEEECS-STTSCCHH----HHHHHHHHHHH
T ss_pred -cccc--ccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCC----ceEEEEcC-CCCcCCHH----HHHHHHHHHHh
Confidence 0001 1237999999999999999988888888876543 27888888 69988543 44566677653
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-23 Score=186.15 Aligned_cols=229 Identities=16% Similarity=0.155 Sum_probs=157.7
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCC--CCChHHHHHHHHhhhhccCCCCceEEEEeCCCC---CCCCCCCCC-
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS--GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN---HGRSAEIEG- 98 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G---~G~S~~~~~- 98 (325)
.+|..+.+..+.+....+..|+||++||.+.+ ...|..++..|++ +||.|+++|+|| ||.+.....
T Consensus 341 ~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~~~~G~s~~~~~~ 412 (582)
T 3o4h_A 341 FDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAA--------AGFHVVMPNYRGSTGYGEEWRLKII 412 (582)
T ss_dssp TTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHH--------TTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred CCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHh--------CCCEEEEeccCCCCCCchhHHhhhh
Confidence 36778888888775434467899999998776 7888899999987 899999999999 666532211
Q ss_pred -CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 99 -LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 99 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
......++++.+.+..++++...+ +++|+||||||.+++.+|.++|+ +++++|++++....
T Consensus 413 ~~~~~~~~~d~~~~~~~l~~~~~~d-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~~~~~~--------- 474 (582)
T 3o4h_A 413 GDPCGGELEDVSAAARWARESGLAS-ELYIMGYSYGGYMTLCALTMKPG--------LFKAGVAGASVVDW--------- 474 (582)
T ss_dssp TCTTTHHHHHHHHHHHHHHHTTCEE-EEEEEEETHHHHHHHHHHHHSTT--------TSSCEEEESCCCCH---------
T ss_pred hhcccccHHHHHHHHHHHHhCCCcc-eEEEEEECHHHHHHHHHHhcCCC--------ceEEEEEcCCccCH---------
Confidence 002234556666666666665567 89999999999999999999999 99999999975321
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
....... . .....+....+. . ....+. .......+.+++
T Consensus 475 -~~~~~~~--------~--------------~~~~~~~~~~~~-~--------~~~~~~-------~~sp~~~~~~i~-- 513 (582)
T 3o4h_A 475 -EEMYELS--------D--------------AAFRNFIEQLTG-G--------SREIMR-------SRSPINHVDRIK-- 513 (582)
T ss_dssp -HHHHHTC--------C--------------HHHHHHHHHHTT-T--------CHHHHH-------HTCGGGGGGGCC--
T ss_pred -HHHhhcc--------c--------------chhHHHHHHHcC-c--------CHHHHH-------hcCHHHHHhcCC--
Confidence 1100000 0 000001100000 0 011100 001112234444
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
+|+++++|++|..++++..+.+.+.++..+. ++++++++++||.++ .++++++.+.+.+||++
T Consensus 514 ~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 577 (582)
T 3o4h_A 514 EPLALIHPQNASRTPLKPLLRLMGELLARGK----TFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 577 (582)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHHHHTTC----CEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCcCHHHHHHHHHHHHhCCC----CEEEEEECCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 8999999999999999998888888877543 389999999999987 67888999999999964
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=166.61 Aligned_cols=204 Identities=12% Similarity=0.112 Sum_probs=138.2
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC--C--------CC------CCCCCC-CH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA--E--------IE------GLDPPH-DI 105 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~--~--------~~------~~~~~~-~~ 105 (325)
.++||||+||++++...|..+++.|.+... ..++|+.+|.+++|.+. . |. .....| ++
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~~~L~~~~~-----~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 77 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLITELGKETP-----KKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANI 77 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHHHHHHHHSS-----SCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhcCC-----CCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCH
Confidence 467999999999999999999999987210 02789988888777521 1 10 000112 67
Q ss_pred HHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 106 ANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 106 ~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
++.++++.++++.+ +.+ ++++|||||||.+++.|+.+++... ...+|+++|+++++.......
T Consensus 78 ~~~a~~l~~~~~~l~~~~~~~-~~~lvGHSmGg~~a~~~~~~~~~~~---~~~~v~~lv~l~~p~~g~~~~--------- 144 (250)
T 3lp5_A 78 DKQAVWLNTAFKALVKTYHFN-HFYALGHSNGGLIWTLFLERYLKES---PKVHIDRLMTIASPYNMESTS--------- 144 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSCCS-EEEEEEETHHHHHHHHHHHHTGGGS---TTCEEEEEEEESCCTTTTCCC---------
T ss_pred HHHHHHHHHHHHHHHHHcCCC-CeEEEEECHhHHHHHHHHHHccccc---cchhhCEEEEECCCCCccccc---------
Confidence 88899999999887 778 9999999999999999999883100 001899999999864332110
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
+ ... ...+..+... ...+ +.++|++
T Consensus 145 -------~-~~~--------------------------------------~~~~~~l~~~------~~~l---p~~vpvl 169 (250)
T 3lp5_A 145 -------T-TAK--------------------------------------TSMFKELYRY------RTGL---PESLTVY 169 (250)
T ss_dssp -------S-SCC--------------------------------------CHHHHHHHHT------GGGS---CTTCEEE
T ss_pred -------c-ccc--------------------------------------CHHHHHHHhc------cccC---CCCceEE
Confidence 0 000 0001111100 1111 2248999
Q ss_pred EEeeC----CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEec--CCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAE----KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLP--NAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~----~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.|+|+ .|..++......+..+++.... ..+.+.+. +++|..+.++| +|++.|.+||..
T Consensus 170 ~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~----~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 170 SIAGTENYTSDGTVPYNSVNYGKYIFQDQVK----HFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLA 233 (250)
T ss_dssp EEECCCCCCTTTBCCHHHHTTHHHHHTTTSS----EEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSC
T ss_pred EEEecCCCCCCceeeHHHHHHHHHHhccccc----ceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhc
Confidence 99999 8999999888777777764221 12334444 57799999998 899999999964
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-23 Score=169.37 Aligned_cols=215 Identities=10% Similarity=0.075 Sum_probs=144.9
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
.++..+.++...+.. .....|+||++||.+ ++...|..++..|++ .||.|+++|+||+|.|...
T Consensus 22 ~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~g~s~~~--- 90 (276)
T 3hxk_A 22 NDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLA--------QGYQVLLLNYTVMNKGTNY--- 90 (276)
T ss_dssp BTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHH--------TTCEEEEEECCCTTSCCCS---
T ss_pred CCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHH--------CCCEEEEecCccCCCcCCC---
Confidence 356677766554432 114579999999943 556778888899987 8999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHHHh---------CCCCCEEEEEeChhHHHHHHHHHH-ccccccCCccCCcceEEEEecCCCCC
Q 020518 100 DPPHDIANAANDLANLVKAK---------GWDWPDVVIGHSMGGKVALHFAQS-CARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~---------~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+.....+|+.+.++.+ +.+ +++|+||||||.+++.++.+ .+. +++++|++++.....
T Consensus 91 ---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~--------~~~~~v~~~p~~~~~ 158 (276)
T 3hxk_A 91 ---NFLSQNLEEVQAVFSLIHQNHKEWQINPE-QVFLLGCSAGGHLAAWYGNSEQIH--------RPKGVILCYPVTSFT 158 (276)
T ss_dssp ---CTHHHHHHHHHHHHHHHHHHTTTTTBCTT-CCEEEEEHHHHHHHHHHSSSCSTT--------CCSEEEEEEECCBTT
T ss_pred ---CcCchHHHHHHHHHHHHHHhHHHcCCCcc-eEEEEEeCHHHHHHHHHHhhccCC--------CccEEEEecCcccHH
Confidence 23344445544444322 345 89999999999999999998 777 999999999865432
Q ss_pred CCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
....... .. . .++ ... . ...+...
T Consensus 159 ~~~~~~~--------------~~---------------~----~~~------~~~-------~----------~~~~~~~ 182 (276)
T 3hxk_A 159 FGWPSDL--------------SH---------------F----NFE------IEN-------I----------SEYNISE 182 (276)
T ss_dssp SSCSSSS--------------SS---------------S----CCC------CSC-------C----------GGGBTTT
T ss_pred hhCCcch--------------hh---------------h----hcC------chh-------h----------hhCChhh
Confidence 1100000 00 0 000 000 0 0001111
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-------------HHHHH
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-------------KGLLE 316 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-------------~~~~~ 316 (325)
.+..+ .+|+++++|++|..++++..+.+.+.+...+. ++++++++++||.+....+ +++.+
T Consensus 183 ~~~~~--~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (276)
T 3hxk_A 183 KVTSS--TPPTFIWHTADDEGVPIYNSLKYCDRLSKHQV----PFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVS 256 (276)
T ss_dssp TCCTT--SCCEEEEEETTCSSSCTHHHHHHHHHHHTTTC----CEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHH
T ss_pred ccccC--CCCEEEEecCCCceeChHHHHHHHHHHHHcCC----CeEEEEECCCCCCccccCccccccccccCchHHHHHH
Confidence 22233 37999999999999999888888887776433 3899999999998877655 67888
Q ss_pred HHHHHHhc
Q 020518 317 IVAPRIAS 324 (325)
Q Consensus 317 ~i~~fl~~ 324 (325)
.+.+||++
T Consensus 257 ~~~~wl~~ 264 (276)
T 3hxk_A 257 WASDWLER 264 (276)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888864
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-22 Score=167.64 Aligned_cols=228 Identities=12% Similarity=0.019 Sum_probs=142.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCC-CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-----
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS-GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL----- 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~----- 99 (325)
+|.++.+..+.+.. ....|+||++||++++ ...|.... .|.+ .||.|+++|+||+|.|......
T Consensus 65 ~g~~i~~~~~~P~~-~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~--------~g~~v~~~d~rg~g~s~~~~~~~~~~~ 134 (318)
T 1l7a_A 65 GNARITGWYAVPDK-EGPHPAIVKYHGYNASYDGEIHEMV-NWAL--------HGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp GGEEEEEEEEEESS-CSCEEEEEEECCTTCCSGGGHHHHH-HHHH--------TTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred CCCEEEEEEEeeCC-CCCccEEEEEcCCCCCCCCCccccc-chhh--------CCcEEEEecCCCCCCCCCcccccCCcc
Confidence 56678777776543 3457889999999999 88887766 5555 8999999999999999765210
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 100 ----------DPPHDIANAANDLANLVKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 100 ----------~~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
...+.+...++|+.++++.+. .+ +++++|||+||.+++.+|.++|+ +.++|++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~~~---------~~~~v~~~ 204 (318)
T 1l7a_A 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDET-RIGVTGGSQGGGLTIAAAALSDI---------PKAAVADY 204 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEE-EEEEEEETHHHHHHHHHHHHCSC---------CSEEEEES
T ss_pred ccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccc-eeEEEecChHHHHHHHHhccCCC---------ccEEEecC
Confidence 012335677777777776652 25 89999999999999999999885 88888876
Q ss_pred cCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc
Q 020518 164 SVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (325)
+..... ...... .. ..... ... .++.... .............
T Consensus 205 p~~~~~---------~~~~~~-~~-~~~~~---~~~-------------~~~~~~~-----------~~~~~~~~~~~~~ 246 (318)
T 1l7a_A 205 PYLSNF---------ERAIDV-AL-EQPYL---EIN-------------SFFRRNG-----------SPETEVQAMKTLS 246 (318)
T ss_dssp CCSCCH---------HHHHHH-CC-STTTT---HHH-------------HHHHHSC-----------CHHHHHHHHHHHH
T ss_pred CcccCH---------HHHHhc-CC-cCccH---HHH-------------HHHhccC-----------CcccHHHHHHhhc
Confidence 643210 111110 00 00000 000 0000000 0000000111111
Q ss_pred CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 244 EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+....+..++ +|+++++|++|..++++....+.+.+.. ++++++++++||.. +.++.+.+.+||+
T Consensus 247 ~~~~~~~~~~~~--~P~li~~g~~D~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~H~~----~~~~~~~~~~fl~ 313 (318)
T 1l7a_A 247 YFDIMNLADRVK--VPVLMSIGLIDKVTPPSTVFAAYNHLET-------KKELKVYRYFGHEY----IPAFQTEKLAFFK 313 (318)
T ss_dssp TTCHHHHGGGCC--SCEEEEEETTCSSSCHHHHHHHHHHCCS-------SEEEEEETTCCSSC----CHHHHHHHHHHHH
T ss_pred cccHHHHHhhCC--CCEEEEeccCCCCCCcccHHHHHhhcCC-------CeeEEEccCCCCCC----cchhHHHHHHHHH
Confidence 112222334443 7999999999999999877777666553 28999999999994 3455666666665
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 314 ~ 314 (318)
T 1l7a_A 314 Q 314 (318)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-23 Score=169.97 Aligned_cols=238 Identities=18% Similarity=0.126 Sum_probs=145.5
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+.+..+.+... ...|+||++||++ ++...|..++..|++. .||.|+++|+||+|.+..+. ...+.
T Consensus 59 ~i~~~~~~p~~~-~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~-------~g~~v~~~d~rg~g~~~~~~---~~~d~ 127 (311)
T 2c7b_A 59 SIRARVYFPKKA-AGLPAVLYYHGGGFVFGSIETHDHICRRLSRL-------SDSVVVSVDYRLAPEYKFPT---AVEDA 127 (311)
T ss_dssp EEEEEEEESSSC-SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH-------HTCEEEEECCCCTTTSCTTH---HHHHH
T ss_pred cEEEEEEecCCC-CCCcEEEEECCCcccCCChhhhHHHHHHHHHh-------cCCEEEEecCCCCCCCCCCc---cHHHH
Confidence 677666655322 3468899999998 8889999999999862 38999999999999986543 23345
Q ss_pred HHHHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 106 ANAANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
...++++.+.++++++ + +++|+||||||.+|+.++.++|+... .+++++|++++......... ...... .
T Consensus 128 ~~~~~~l~~~~~~~~~d~~-~i~l~G~S~GG~la~~~a~~~~~~~~----~~~~~~vl~~p~~~~~~~~~--~~~~~~-~ 199 (311)
T 2c7b_A 128 YAALKWVADRADELGVDPD-RIAVAGDSAGGNLAAVVSILDRNSGE----KLVKKQVLIYPVVNMTGVPT--ASLVEF-G 199 (311)
T ss_dssp HHHHHHHHHTHHHHTEEEE-EEEEEEETHHHHHHHHHHHHHHHTTC----CCCSEEEEESCCCCCSSCCC--HHHHHH-H
T ss_pred HHHHHHHHhhHHHhCCCch-hEEEEecCccHHHHHHHHHHHHhcCC----CCceeEEEECCccCCccccc--cCCccH-H
Confidence 5556666666666776 5 89999999999999999999886111 14999999998754211110 000110 0
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
. ....... .....++...+........ ..........+..+ .|++++
T Consensus 200 ~---~~~~~~~--------------~~~~~~~~~~~~~~~~~~~-------------~~~~~p~~~~l~~~---~P~lii 246 (311)
T 2c7b_A 200 V---AETTSLP--------------IELMVWFGRQYLKRPEEAY-------------DFKASPLLADLGGL---PPALVV 246 (311)
T ss_dssp H---CTTCSSC--------------HHHHHHHHHHHCSSTTGGG-------------STTTCGGGSCCTTC---CCEEEE
T ss_pred H---hccCCCC--------------HHHHHHHHHHhCCCCcccc-------------CcccCcccccccCC---CcceEE
Confidence 0 0000011 1111111111110000000 00000111122333 399999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-----ccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-----VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~e~p~~~~~~i~~fl~~ 324 (325)
+|++|..++.. ..+.+.+...+. +++++++++++|.+. .+.++++.+.|.+||++
T Consensus 247 ~G~~D~~~~~~--~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (311)
T 2c7b_A 247 TAEYDPLRDEG--ELYAYKMKASGS----RAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRS 306 (311)
T ss_dssp EETTCTTHHHH--HHHHHHHHHTTC----CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred EcCCCCchHHH--HHHHHHHHHCCC----CEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHH
Confidence 99999887532 233333333222 389999999999876 35668999999999964
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=173.71 Aligned_cols=230 Identities=14% Similarity=0.120 Sum_probs=147.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCC-ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++..+....+.+.. ....|+||++||++++.. .|..+...|.+ .||.|+++|+||+|.|.... ...+
T Consensus 176 ~g~~l~~~~~~P~~-~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~--------~G~~V~~~D~~G~G~s~~~~---~~~~ 243 (415)
T 3mve_A 176 EKGKITAHLHLTNT-DKPHPVVIVSAGLDSLQTDMWRLFRDHLAK--------HDIAMLTVDMPSVGYSSKYP---LTED 243 (415)
T ss_dssp SSSEEEEEEEESCS-SSCEEEEEEECCTTSCGGGGHHHHHHTTGG--------GTCEEEEECCTTSGGGTTSC---CCSC
T ss_pred CCEEEEEEEEecCC-CCCCCEEEEECCCCccHHHHHHHHHHHHHh--------CCCEEEEECCCCCCCCCCCC---CCCC
Confidence 56677766665533 345789999999998854 45555666765 89999999999999998654 3456
Q ss_pred HHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 105 IANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
.+.++.++.+++.... .+ +++++||||||.+++.+|..+|+ +|+++|++++..... ...
T Consensus 244 ~~~~~~~v~~~l~~~~~vd~~-~i~l~G~S~GG~~a~~~a~~~~~--------~v~~~v~~~~~~~~~---------~~~ 305 (415)
T 3mve_A 244 YSRLHQAVLNELFSIPYVDHH-RVGLIGFRFGGNAMVRLSFLEQE--------KIKACVILGAPIHDI---------FAS 305 (415)
T ss_dssp TTHHHHHHHHHGGGCTTEEEE-EEEEEEETHHHHHHHHHHHHTTT--------TCCEEEEESCCCSHH---------HHC
T ss_pred HHHHHHHHHHHHHhCcCCCCC-cEEEEEECHHHHHHHHHHHhCCc--------ceeEEEEECCccccc---------ccc
Confidence 7777788888887764 45 89999999999999999999998 999999998763210 000
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCc--ccccccCCCCCCc
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS--YWPLLEHPPQGME 259 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P 259 (325)
....... + ......+......... ...........+.... ... ...+ ++|
T Consensus 306 ~~~~~~~----~---------------~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~i--~~P 357 (415)
T 3mve_A 306 PQKLQQM----P---------------KMYLDVLASRLGKSVV------DIYSLSGQMAAWSLKVQGFLS-SRKT--KVP 357 (415)
T ss_dssp HHHHTTS----C---------------HHHHHHHHHHTTCSSB------CHHHHHHHGGGGCTTTTTTTT-SSCB--SSC
T ss_pred HHHHHHh----H---------------HHHHHHHHHHhCCCcc------CHHHHHHHHhhcCcccccccc-cCCC--CCC
Confidence 0000000 0 0000111110000000 0011111111111100 000 1233 489
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|+|++|.+++++..+.+.+..+. ++++++++..+ .+.++++.+.+.+||++
T Consensus 358 vLii~G~~D~~vp~~~~~~l~~~~~~--------~~l~~i~g~~~---h~~~~~~~~~i~~fL~~ 411 (415)
T 3mve_A 358 ILAMSLEGDPVSPYSDNQMVAFFSTY--------GKAKKISSKTI---TQGYEQSLDLAIKWLED 411 (415)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHTBTT--------CEEEEECCCSH---HHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCC--------ceEEEecCCCc---ccchHHHHHHHHHHHHH
Confidence 99999999999999888777765444 89999998322 23678888899999864
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-23 Score=162.42 Aligned_cols=190 Identities=18% Similarity=0.215 Sum_probs=137.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC---CCCCCC--C-C
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG---RSAEIE--G-L 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G---~S~~~~--~-~ 99 (325)
++..+.|..+.+.. +.+|+|||+||++++...|..+.+.|. ++|.|+++|.|++. .+.... . .
T Consensus 14 ~~~~l~~~~~~~~~--~~~p~vv~lHG~g~~~~~~~~~~~~l~---------~~~~vv~~d~~~~~~~g~~~~~~~~~~~ 82 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK--ESRECLFLLHGSGVDETTLVPLARRIA---------PTATLVAARGRIPQEDGFRWFERIDPTR 82 (223)
T ss_dssp CSSSSCEEEESTTS--SCCCEEEEECCTTBCTTTTHHHHHHHC---------TTSEEEEECCSEEETTEEESSCEEETTE
T ss_pred cCCCceEEEeCCCC--CCCCEEEEEecCCCCHHHHHHHHHhcC---------CCceEEEeCCCCCcCCccccccccCCCc
Confidence 45678888776532 346899999999999999999988887 78999999988742 111100 0 0
Q ss_pred CCCCCHHHHHHHHHHHHHHh----CC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 100 DPPHDIANAANDLANLVKAK----GW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~----~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
....++.+.++++.++++.+ ++ + +++++||||||.+|+.++.++|+ +++++|++++......
T Consensus 83 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~--------~~~~~v~~~~~~~~~~--- 150 (223)
T 3b5e_A 83 FEQKSILAETAAFAAFTNEAAKRHGLNLD-HATFLGYSNGANLVSSLMLLHPG--------IVRLAALLRPMPVLDH--- 150 (223)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEEEETHHHHHHHHHHHHSTT--------SCSEEEEESCCCCCSS---
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEECcHHHHHHHHHHhCcc--------ccceEEEecCccCccc---
Confidence 01234566677777777654 43 5 89999999999999999999999 9999999997632100
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
. .....
T Consensus 151 -------------------------------------------------~-------------------------~~~~~ 156 (223)
T 3b5e_A 151 -------------------------------------------------V-------------------------PATDL 156 (223)
T ss_dssp -------------------------------------------------C-------------------------CCCCC
T ss_pred -------------------------------------------------c-------------------------ccccc
Confidence 0 00011
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.++|+++++|++|..++++..+ +.+.++..+. ++++++++ +||.+..+.+ +.+.+||++
T Consensus 157 --~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~----~~~~~~~~-~gH~~~~~~~----~~i~~~l~~ 215 (223)
T 3b5e_A 157 --AGIRTLIIAGAADETYGPFVPA-LVTLLSRHGA----EVDARIIP-SGHDIGDPDA----AIVRQWLAG 215 (223)
T ss_dssp --TTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTC----EEEEEEES-CCSCCCHHHH----HHHHHHHHC
T ss_pred --cCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCC----ceEEEEec-CCCCcCHHHH----HHHHHHHHh
Confidence 2379999999999999998888 8887775432 38999999 8999875544 456666653
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=170.27 Aligned_cols=230 Identities=11% Similarity=0.041 Sum_probs=141.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-----
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL----- 99 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~----- 99 (325)
.+|.++.+..+.+.......|+||++||++++...|... ..+.+ .||.|+++|+||+|.|......
T Consensus 76 ~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~~-~~l~~--------~G~~v~~~d~rG~g~s~~~~~~~~~p~ 146 (337)
T 1vlq_A 76 YRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDW-LFWPS--------MGYICFVMDTRGQGSGWLKGDTPDYPE 146 (337)
T ss_dssp GGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGG-CHHHH--------TTCEEEEECCTTCCCSSSCCCCCBCCS
T ss_pred CCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchhh-cchhh--------CCCEEEEecCCCCCCcccCCCCccccc
Confidence 367788888776643234568899999999887665543 34554 8999999999999976432100
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCc
Q 020518 100 -----------------DPPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 100 -----------------~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
...+.+...++|+.++++.+ +.+ +++++|||+||.+++.+|.++| ++
T Consensus 147 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~la~~~a~~~p---------~v 216 (337)
T 1vlq_A 147 GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQE-RIVIAGGSQGGGIALAVSALSK---------KA 216 (337)
T ss_dssp SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHCS---------SC
T ss_pred ccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEeCHHHHHHHHHHhcCC---------Cc
Confidence 01334567888888888776 234 8999999999999999999988 48
Q ss_pred ceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHH
Q 020518 157 KQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAV 236 (325)
Q Consensus 157 ~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (325)
+++|++.+..... ..... .. .. ...... ..++..... ...
T Consensus 217 ~~~vl~~p~~~~~---------~~~~~-~~---~~-~~~~~~-------------~~~~~~~~~----------~~~--- 256 (337)
T 1vlq_A 217 KALLCDVPFLCHF---------RRAVQ-LV---DT-HPYAEI-------------TNFLKTHRD----------KEE--- 256 (337)
T ss_dssp CEEEEESCCSCCH---------HHHHH-HC---CC-TTHHHH-------------HHHHHHCTT----------CHH---
T ss_pred cEEEECCCcccCH---------HHHHh-cC---CC-cchHHH-------------HHHHHhCch----------hHH---
Confidence 9999888753221 11110 00 00 001000 111111000 000
Q ss_pred HhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHH
Q 020518 237 QMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLL 315 (325)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~ 315 (325)
..+..+...+....+..++ +|+++++|++|..++++....+.+.++. ++++++++++||.... +..+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~i~--~P~lii~G~~D~~~p~~~~~~~~~~l~~-------~~~~~~~~~~gH~~~~~~~~~~~~ 327 (337)
T 1vlq_A 257 IVFRTLSYFDGVNFAARAK--IPALFSVGLMDNICPPSTVFAAYNYYAG-------PKEIRIYPYNNHEGGGSFQAVEQV 327 (337)
T ss_dssp HHHHHHHTTCHHHHHTTCC--SCEEEEEETTCSSSCHHHHHHHHHHCCS-------SEEEEEETTCCTTTTHHHHHHHHH
T ss_pred HHHHhhhhccHHHHHHHcC--CCEEEEeeCCCCCCCchhHHHHHHhcCC-------CcEEEEcCCCCCCCcchhhHHHHH
Confidence 0011111112222334444 8999999999999999887776666553 2899999999999532 3334444
Q ss_pred HHHHHHH
Q 020518 316 EIVAPRI 322 (325)
Q Consensus 316 ~~i~~fl 322 (325)
+.|.++|
T Consensus 328 ~fl~~~l 334 (337)
T 1vlq_A 328 KFLKKLF 334 (337)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=164.89 Aligned_cols=187 Identities=15% Similarity=0.185 Sum_probs=136.1
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhh-hhccCCCCceEEEEeCCCCCCCC-----------------CCCCCCCCCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLAST-LSQTSASSEWRMVLVDLRNHGRS-----------------AEIEGLDPPH 103 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~vi~~D~~G~G~S-----------------~~~~~~~~~~ 103 (325)
+..|+|||+||++++...|..+...|... + ...+++|+++|.|+++.+ ..... ...
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~--~~~ 94 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLRMWIKQVLNQDL----TFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPE--HLE 94 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHTSCC----CCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCC--CHH
T ss_pred CCCcEEEEEecCCCchhhHHHHHHHHhhccc----CCCceEEEeCCCCccccccCCCCccccceeccCCCccccc--chh
Confidence 35789999999999999999999988852 0 114799999888754211 11111 335
Q ss_pred CHHHHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
++++.++++..++++. +.+ +++|+||||||.+++.++.++|+ +++++|++++.......
T Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~~--------~~~~~v~~~~~~~~~~~------- 158 (239)
T 3u0v_A 95 SIDVMCQVLTDLIDEEVKSGIKKN-RILIGGFSMGGCMAMHLAYRNHQ--------DVAGVFALSSFLNKASA------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGG-GEEEEEETHHHHHHHHHHHHHCT--------TSSEEEEESCCCCTTCH-------
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcc-cEEEEEEChhhHHHHHHHHhCcc--------ccceEEEecCCCCchhH-------
Confidence 7888889999998873 556 89999999999999999999999 99999999976432100
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
. ... . ......+
T Consensus 159 --~-----------------~~~-------------~------------------------------------~~~~~~~ 170 (239)
T 3u0v_A 159 --V-----------------YQA-------------L------------------------------------QKSNGVL 170 (239)
T ss_dssp --H-----------------HHH-------------H------------------------------------HHCCSCC
T ss_pred --H-----------------HHH-------------H------------------------------------HhhccCC
Confidence 0 000 0 0001125
Q ss_pred c-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 259 E-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 259 P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
| +++++|++|..++++..+.+.+.+...+. ++++++++++||.+..+..+.+.+.|.++|
T Consensus 171 pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~----~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 171 PELFQCHGTADELVLHSWAEETNSMLKSLGV----TTKFHSFPNVYHELSKTELDILKLWILTKL 231 (239)
T ss_dssp CCEEEEEETTCSSSCHHHHHHHHHHHHHTTC----CEEEEEETTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeeCCCCccCHHHHHHHHHHHHHcCC----cEEEEEeCCCCCcCCHHHHHHHHHHHHHhC
Confidence 6 99999999999999888888888876443 389999999999998655555555555554
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-22 Score=167.37 Aligned_cols=220 Identities=14% Similarity=0.162 Sum_probs=137.3
Q ss_pred CCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 42 ~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
..+|+|||+||.+ ++...|..++..|+.. .||+|+++|+||.+... ....+++.++.+..++++
T Consensus 94 ~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~-------~g~~vi~~D~r~~~~~~------~~~~~~d~~~~~~~l~~~ 160 (326)
T 3d7r_A 94 QIDKKILYIHGGFNALQPSPFHWRLLDKITLS-------TLYEVVLPIYPKTPEFH------IDDTFQAIQRVYDQLVSE 160 (326)
T ss_dssp CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHH-------HCSEEEEECCCCTTTSC------HHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCHHHHHHHHHHHHH-------hCCEEEEEeCCCCCCCC------chHHHHHHHHHHHHHHhc
Confidence 3578999999955 4666788888888742 48999999999865422 234577778888888888
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchh-HHHHHHHHhhcCCCCCCcHHH
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEG-EVEKVLQTLQSLPSSIPSRKW 197 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 197 (325)
++.+ +++|+||||||.+|+.+|.++|+.. ...++++|++++............ ... .. .......
T Consensus 161 ~~~~-~i~l~G~S~GG~lAl~~a~~~~~~~----~~~v~~lvl~~p~~~~~~~~~~~~~~~~---~~-----~~~~~~~- 226 (326)
T 3d7r_A 161 VGHQ-NVVVMGDGSGGALALSFVQSLLDNQ----QPLPNKLYLISPILDATLSNKDISDALI---EQ-----DAVLSQF- 226 (326)
T ss_dssp HCGG-GEEEEEETHHHHHHHHHHHHHHHTT----CCCCSEEEEESCCCCTTCCCTTCCHHHH---HH-----CSSCCHH-
T ss_pred cCCC-cEEEEEECHHHHHHHHHHHHHHhcC----CCCCCeEEEECcccccCcCChhHHhhhc---cc-----CcccCHH-
Confidence 8888 9999999999999999999998810 012999999998754321111100 000 00 0000000
Q ss_pred HHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 198 LVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
.... ....+.... . ...... ......+.. .+|+++++|++|..+ ....
T Consensus 227 ~~~~--------~~~~~~~~~-~----~~~~~~--------------~~~~~~~~~---~~P~lii~G~~D~~~--~~~~ 274 (326)
T 3d7r_A 227 GVNE--------IMKKWANGL-P----LTDKRI--------------SPINGTIEG---LPPVYMFGGGREMTH--PDMK 274 (326)
T ss_dssp HHHH--------HHHHHHTTS-C----TTSTTT--------------SGGGSCCTT---CCCEEEEEETTSTTH--HHHH
T ss_pred HHHH--------HHHHhcCCC-C----CCCCeE--------------CcccCCccc---CCCEEEEEeCcccch--HHHH
Confidence 0000 001111000 0 000000 000111222 259999999999643 3344
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccc---cChHHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHV---DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 324 (325)
.+.+.+..... ++++++++++||.++. ++++++.+.|.+||++
T Consensus 275 ~~~~~l~~~~~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~ 320 (326)
T 3d7r_A 275 LFEQMMLQHHQ----YIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDE 320 (326)
T ss_dssp HHHHHHHHTTC----CEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHCCC----cEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHH
Confidence 45555544322 3899999999999988 8899999999999975
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=176.67 Aligned_cols=225 Identities=13% Similarity=0.145 Sum_probs=144.1
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
++++|+|+||++++...|..+++.|. .+|+|+++|+||+|.+.. ...+++++++++.+.+..+...
T Consensus 100 ~~~~l~~lhg~~~~~~~~~~l~~~L~---------~~~~v~~~d~~g~~~~~~-----~~~~~~~~a~~~~~~i~~~~~~ 165 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQFSVLSRYLD---------PQWSIIGIQSPRPNGPMQ-----TAANLDEVCEAHLATLLEQQPH 165 (329)
T ss_dssp SSCEEEEECCTTSCCGGGGGGGGTSC---------TTCEEEEECCCTTTSHHH-----HCSSHHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEEeCCcccchHHHHHHHhcC---------CCCeEEEeeCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999888886 789999999999998764 3568999999998888887444
Q ss_pred CCEEEEEeChhHHHHHHHHHH---ccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQS---CARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~---~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (325)
++++|+||||||.+|+.+|.+ +|+ +|.+++++++.+....... ... .... .... .
T Consensus 166 ~~~~l~G~S~Gg~ia~~~a~~L~~~~~--------~v~~lvl~d~~~~~~~~~~-----~~~---~~~~---~~~~---~ 223 (329)
T 3tej_A 166 GPYYLLGYSLGGTLAQGIAARLRARGE--------QVAFLGLLDTWPPETQNWQ-----EKE---ANGL---DPEV---L 223 (329)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTC--------CEEEEEEESCCCTHHHHTC-------------CC---CCTH---H
T ss_pred CCEEEEEEccCHHHHHHHHHHHHhcCC--------cccEEEEeCCCCCCccccc-----ccc---cccc---Chhh---H
Confidence 499999999999999999999 898 9999999998753210000 000 0000 0000 0
Q ss_pred HHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHH
Q 020518 200 NHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
..+. .....++......... .........+........... .. ...+|++++.|.+|...+......+
T Consensus 224 ~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~--~~~~pv~l~~~~~d~~~~~~~~~~w 291 (329)
T 3tej_A 224 AEIN-----REREAFLAAQQGSTST-ELFTTIEGNYADAVRLLTTAH----SV--PFDGKATLFVAERTLQEGMSPERAW 291 (329)
T ss_dssp HHHH-----HHHHHHHHTTCCCSCC-HHHHHHHHHHHHHHHHHTTCC----CC--CEEEEEEEEEEGGGCCTTCCHHHHH
T ss_pred HHHH-----HHHHHHHHhccccccH-HHHHHHHHHHHHHHHHHhcCC----CC--CcCCCeEEEEeccCCCCCCCchhhH
Confidence 0000 0000111110000000 000000011111111111100 11 2247999999999987766555555
Q ss_pred HHHhhhcCCCCCCceeEEEecCCCccccccCh--HHHHHHHHHHHhc
Q 020518 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP--KGLLEIVAPRIAS 324 (325)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~~ 324 (325)
.+..++ ++++.++ |||+.+++.| +.+++.|.+||.+
T Consensus 292 ~~~~~~--------~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L~~ 329 (329)
T 3tej_A 292 SPWIAE--------LDIYRQD-CAHVDIISPGTFEKIGPIIRATLNR 329 (329)
T ss_dssp TTTEEE--------EEEEEES-SCGGGGGSTTTHHHHHHHHHHHHCC
T ss_pred HHhcCC--------cEEEEec-CChHHhCCChHHHHHHHHHHHHhcC
Confidence 555544 8999998 5999999877 8999999999863
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=160.67 Aligned_cols=216 Identities=13% Similarity=0.114 Sum_probs=139.0
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCce--EEEEeCCCCCCCCCCCC---------------CCCCCCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEW--RMVLVDLRNHGRSAEIE---------------GLDPPHD 104 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~vi~~D~~G~G~S~~~~---------------~~~~~~~ 104 (325)
.+.+||||+||++++...|..+++.|.+ .|| +|+.+|.+++|.+.... ......+
T Consensus 4 ~~~~pvvliHG~~~~~~~~~~l~~~L~~--------~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~ 75 (249)
T 3fle_A 4 IKTTATLFLHGYGGSERSETFMVKQALN--------KNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGN 75 (249)
T ss_dssp -CCEEEEEECCTTCCGGGTHHHHHHHHT--------TTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCC
T ss_pred CCCCcEEEECCCCCChhHHHHHHHHHHH--------cCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCcc
Confidence 3578999999999999999999999997 564 79999999988752110 0001235
Q ss_pred HHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 105 IANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+.++++++.++++.+ +++ ++++|||||||.+++.++.++|+. ....+|+++|+++++...........
T Consensus 76 ~~~~~~~l~~~i~~l~~~~~~~-~~~lvGHSmGG~ia~~~~~~~~~~---~~~~~v~~lv~i~~p~~g~~~~~~~~---- 147 (249)
T 3fle_A 76 FKENAYWIKEVLSQLKSQFGIQ-QFNFVGHSMGNMSFAFYMKNYGDD---RHLPQLKKEVNIAGVYNGILNMNENV---- 147 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-EEEEEEETHHHHHHHHHHHHHSSC---SSSCEEEEEEEESCCTTCCTTTSSCT----
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-ceEEEEECccHHHHHHHHHHCccc---ccccccceEEEeCCccCCcccccCCc----
Confidence 566666666666544 788 999999999999999999999741 00127999999997643321100000
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
.. . .+..... . ......+..+... ...++. .++|+
T Consensus 148 ----------~~-~-----------------------~~~~~g~-p--~~~~~~~~~l~~~------~~~~p~--~~~~v 182 (249)
T 3fle_A 148 ----------NE-I-----------------------IVDKQGK-P--SRMNAAYRQLLSL------YKIYCG--KEIEV 182 (249)
T ss_dssp ----------TT-S-----------------------CBCTTCC-B--SSCCHHHHHTGGG------HHHHTT--TTCEE
T ss_pred ----------ch-h-----------------------hhcccCC-C--cccCHHHHHHHHH------HhhCCc--cCCeE
Confidence 00 0 0000000 0 0000111111110 112221 34899
Q ss_pred EEEeeC------CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC--CCccccccChHHHHHHHHHHHh
Q 020518 261 AIVRAE------KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN--AGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 261 l~i~g~------~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+.|+|. .|..|+...+..+..++++... ..+.+++.| +.|....++| ++.+.|.+||-
T Consensus 183 l~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~----~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FLw 248 (249)
T 3fle_A 183 LNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTK----SYQEMKFKGAKAQHSQLHENK-DVANEIIQFLW 248 (249)
T ss_dssp EEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSS----EEEEEEEESGGGSTGGGGGCH-HHHHHHHHHHT
T ss_pred EEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCC----ceEEEEEeCCCCchhccccCH-HHHHHHHHHhc
Confidence 999998 6899999888877777776432 145566755 8999999987 88889999983
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=175.25 Aligned_cols=235 Identities=11% Similarity=0.084 Sum_probs=143.8
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.+....+.+.+ ....|+||++||++++. |...+..|++ .||.|+++|+||+|.+.... ..+..+++
T Consensus 144 ~l~~~l~~P~~-~~~~P~Vv~~hG~~~~~--~~~~a~~La~--------~Gy~V~a~D~rG~g~~~~~~---~~~~~~d~ 209 (422)
T 3k2i_A 144 RVRATLFLPPG-PGPFPGIIDIFGIGGGL--LEYRASLLAG--------HGFATLALAYYNFEDLPNNM---DNISLEYF 209 (422)
T ss_dssp TEEEEEEECSS-SCCBCEEEEECCTTCSC--CCHHHHHHHT--------TTCEEEEEECSSSTTSCSSC---SCEETHHH
T ss_pred cEEEEEEcCCC-CCCcCEEEEEcCCCcch--hHHHHHHHHh--------CCCEEEEEccCCCCCCCCCc---ccCCHHHH
Confidence 56666555532 24578999999998764 4445777876 89999999999999887654 34566666
Q ss_pred HHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 109 ANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 109 ~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
.+.+..+.+..+ .+ ++.|+||||||.+|+.+|.++|+ |+++|++++............. .
T Consensus 210 ~~~~~~l~~~~~v~~~-~i~l~G~S~GG~lAl~~a~~~p~---------v~a~V~~~~~~~~~~~~~~~~~--------~ 271 (422)
T 3k2i_A 210 EEAVCYMLQHPQVKGP-GIGLLGISLGADICLSMASFLKN---------VSATVSINGSGISGNTAINYKH--------S 271 (422)
T ss_dssp HHHHHHHHTSTTBCCS-SEEEEEETHHHHHHHHHHHHCSS---------EEEEEEESCCSBCCSSCEEETT--------E
T ss_pred HHHHHHHHhCcCcCCC-CEEEEEECHHHHHHHHHHhhCcC---------ccEEEEEcCcccccCCchhhcC--------C
Confidence 666665555543 46 99999999999999999999985 8999999876432211100000 0
Q ss_pred cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 187 SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
..+...... . ........ ...+. ..+..... .........+.+++ +|+|+|+|+
T Consensus 272 ~~~~~~~~~----------------~---~~~~~~~~-~~~~~---~~~~~~~~-~~~~~~~~~~~~i~--~P~Lii~G~ 325 (422)
T 3k2i_A 272 SIPPLGYDL----------------R---RIKVAFSG-LVDIV---DIRNALVG-GYKNPSMIPIEKAQ--GPILLIVGQ 325 (422)
T ss_dssp EECCCCBCG----------------G---GCEECTTS-CEECT---TCBCCCTT-GGGSTTBCCGGGCC--SCEEEEEET
T ss_pred cCCCcccch----------------h---hcccCcch-hHHHH---HHHhhhhh-cccccccccHHHCC--CCEEEEEeC
Confidence 000000000 0 00000000 00000 00000000 00011112234443 899999999
Q ss_pred CCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccc----------------------------cccChHHHHHH
Q 020518 267 KSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWV----------------------------HVDNPKGLLEI 317 (325)
Q Consensus 267 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~----------------------------~~e~p~~~~~~ 317 (325)
+|..+++... +.+.+.+...+. +++++++++++||++ +.+.++++.+.
T Consensus 326 ~D~~vp~~~~~~~~~~~l~~~g~---~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 402 (422)
T 3k2i_A 326 DDHNWRSELYAQTVSERLQAHGK---EKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQ 402 (422)
T ss_dssp TCSSSCHHHHHHHHHHHHHHTTC---CCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhcCC---CCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHH
Confidence 9999998744 566666655432 237999999999997 33567889999
Q ss_pred HHHHHhc
Q 020518 318 VAPRIAS 324 (325)
Q Consensus 318 i~~fl~~ 324 (325)
|.+||++
T Consensus 403 i~~Fl~~ 409 (422)
T 3k2i_A 403 ILAFFCK 409 (422)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=166.13 Aligned_cols=245 Identities=13% Similarity=0.041 Sum_probs=143.6
Q ss_pred ccc-ceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC
Q 020518 26 SLQ-TLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP 101 (325)
Q Consensus 26 ~~~-~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 101 (325)
+|. .+.++.+.+.......|+||++||++ ++...|..++..|++. .||.|+++|+||+|.+..+. .
T Consensus 60 ~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~-------~G~~Vv~~d~rg~~~~~~~~---~ 129 (323)
T 1lzl_A 60 DGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARE-------LGFAVANVEYRLAPETTFPG---P 129 (323)
T ss_dssp TTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHH-------HCCEEEEECCCCTTTSCTTH---H
T ss_pred CCCceeEEEEEecCCCCCCCcEEEEECCCccccCChhhhHHHHHHHHHh-------cCcEEEEecCCCCCCCCCCc---h
Confidence 343 67777666543334578999999998 7888898998888863 38999999999999886542 1
Q ss_pred CCCHHHHHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 102 PHDIANAANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
..+..+.++.+.+.++++++ + +++|+||||||.+++.++.++++.. ...++++|++++........ .
T Consensus 130 ~~d~~~~~~~l~~~~~~~~~d~~-~i~l~G~S~GG~la~~~a~~~~~~~----~~~~~~~vl~~p~~~~~~~~------~ 198 (323)
T 1lzl_A 130 VNDCYAALLYIHAHAEELGIDPS-RIAVGGQSAGGGLAAGTVLKARDEG----VVPVAFQFLEIPELDDRLET------V 198 (323)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEE-EEEEEEETHHHHHHHHHHHHHHHHC----SSCCCEEEEESCCCCTTCCS------H
T ss_pred HHHHHHHHHHHHhhHHHcCCChh-heEEEecCchHHHHHHHHHHHhhcC----CCCeeEEEEECCccCCCcCc------h
Confidence 22344444445554555655 5 8999999999999999999988611 11499999999865432110 0
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
. ...... ......... .. ....+............. .. +..... ...+...+|
T Consensus 199 ~-~~~~~~--~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~---~~---------~~sp~~---~~~~~~~~P 251 (323)
T 1lzl_A 199 S-MTNFVD--TPLWHRPNA-IL--------SWKYYLGESYSGPEDPDV---SI---------YAAPSR---ATDLTGLPP 251 (323)
T ss_dssp H-HHHCSS--CSSCCHHHH-HH--------HHHHHHCTTCCCTTCSCC---CT---------TTCGGG---CSCCTTCCC
T ss_pred h-HHHhcc--CCCCCHHHH-HH--------HHHHhCCCCcccccccCC---Cc---------ccCccc---CcccCCCCh
Confidence 0 001100 001111000 00 000111110000000000 00 000000 011122259
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc----cChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~ 324 (325)
+++++|++|..+ .....+.+.+...+. ++++++++|++|.... +.++++.+.+.+||++
T Consensus 252 ~li~~G~~D~~~--~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~ 314 (323)
T 1lzl_A 252 TYLSTMELDPLR--DEGIEYALRLLQAGV----SVELHSFPGTFHGSALVATAAVSERGAAEALTAIRR 314 (323)
T ss_dssp EEEEEETTCTTH--HHHHHHHHHHHHTTC----CEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHH
T ss_pred hheEECCcCCch--HHHHHHHHHHHHcCC----CEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHH
Confidence 999999999887 234445555544332 3899999999997553 3367899999999864
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=163.99 Aligned_cols=228 Identities=14% Similarity=0.084 Sum_probs=139.9
Q ss_pred ceEEEEcccCCCCCCCceEEEecC---CCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHG---LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+.++.+.+.. ....|+||++|| +.++...|..++..|++. .||.|+++|+||+|.+..+ ..+
T Consensus 76 ~i~~~iy~P~~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~-------~g~~Vv~~Dyrg~~~~~~p------~~~ 141 (323)
T 3ain_A 76 NIKARVYYPKT-QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNS-------CQCVTISVDYRLAPENKFP------AAV 141 (323)
T ss_dssp EEEEEEEECSS-CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHH-------HTSEEEEECCCCTTTSCTT------HHH
T ss_pred eEEEEEEecCC-CCCCcEEEEECCCccccCChHHHHHHHHHHHHh-------cCCEEEEecCCCCCCCCCc------chH
Confidence 67776666543 345789999999 457889999999999852 3899999999999987543 233
Q ss_pred HHHHHHHHHHHH---Hh-CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCc---ceEEEEecCCCCCCCCCchhHH
Q 020518 106 ANAANDLANLVK---AK-GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP---KQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 106 ~~~~~~l~~~l~---~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v---~~lvli~~~~~~~~~~~~~~~~ 178 (325)
++..+.+..+.+ .+ +.+ +++|+||||||.+|+.+|.++|+ ++ +++|++++........ .
T Consensus 142 ~d~~~~~~~l~~~~~~lgd~~-~i~l~G~S~GG~lA~~~a~~~~~--------~~~~~~~~vl~~p~~~~~~~~---~-- 207 (323)
T 3ain_A 142 VDSFDALKWVYNNSEKFNGKY-GIAVGGDSAGGNLAAVTAILSKK--------ENIKLKYQVLIYPAVSFDLIT---K-- 207 (323)
T ss_dssp HHHHHHHHHHHHTGGGGTCTT-CEEEEEETHHHHHHHHHHHHHHH--------TTCCCSEEEEESCCCSCCSCC---H--
T ss_pred HHHHHHHHHHHHhHHHhCCCc-eEEEEecCchHHHHHHHHHHhhh--------cCCCceeEEEEeccccCCCCC---c--
Confidence 444444433333 33 466 89999999999999999999998 65 8899998764332111 0
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
... ... ....... ....++...+....... ... ... .....+..+ .
T Consensus 208 -~~~-~~~--~~~~l~~--------------~~~~~~~~~~~~~~~~~---~~~---------~~s-p~~~~l~~l---~ 253 (323)
T 3ain_A 208 -SLY-DNG--EGFFLTR--------------EHIDWFGQQYLRSFADL---LDF---------RFS-PILADLNDL---P 253 (323)
T ss_dssp -HHH-HHS--SSSSSCH--------------HHHHHHHHHHCSSGGGG---GCT---------TTC-GGGSCCTTC---C
T ss_pred -cHH-Hhc--cCCCCCH--------------HHHHHHHHHhCCCCccc---CCc---------ccC-cccCcccCC---C
Confidence 000 000 0000111 11111111110000000 000 000 000112222 3
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-----ChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-----NPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl~~ 324 (325)
|+++++|++|..++ ....+.+.+...+. +++++++++++|.++.. .++++.+.+.+||++
T Consensus 254 P~lii~G~~D~l~~--~~~~~a~~l~~ag~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 318 (323)
T 3ain_A 254 PALIITAEHDPLRD--QGEAYANKLLQSGV----QVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRK 318 (323)
T ss_dssp CEEEEEETTCTTHH--HHHHHHHHHHHTTC----CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHEEECCCCccHH--HHHHHHHHHHHcCC----CEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHH
Confidence 99999999998873 34445555554332 38999999999998864 458999999999864
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-22 Score=162.54 Aligned_cols=169 Identities=11% Similarity=-0.012 Sum_probs=127.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK----- 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~----- 117 (325)
..|+|||+||++++...|..++..|++ .||.|+++|+||. . ...++....+.+.+...
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~~s---~------~~~~~~~~~~~l~~~~~~~~~~ 110 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWAS--------HGFVVAAAETSNA---G------TGREMLACLDYLVRENDTPYGT 110 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHH--------HTCEEEEECCSCC---T------TSHHHHHHHHHHHHHHHSSSST
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHh--------CCeEEEEecCCCC---c------cHHHHHHHHHHHHhcccccccc
Confidence 468899999999999999999999987 7999999999953 1 22334444555555443
Q ss_pred ---HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCc
Q 020518 118 ---AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPS 194 (325)
Q Consensus 118 ---~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (325)
.++.+ +++++||||||.+++.++ .++ ++++++++++.....
T Consensus 111 ~~~~~~~~-~i~l~G~S~GG~~a~~~a--~~~--------~v~~~v~~~~~~~~~------------------------- 154 (258)
T 2fx5_A 111 YSGKLNTG-RVGTSGHSQGGGGSIMAG--QDT--------RVRTTAPIQPYTLGL------------------------- 154 (258)
T ss_dssp TTTTEEEE-EEEEEEEEHHHHHHHHHT--TST--------TCCEEEEEEECCSST-------------------------
T ss_pred cccccCcc-ceEEEEEChHHHHHHHhc--cCc--------CeEEEEEecCccccc-------------------------
Confidence 34556 899999999999999998 445 899999998743100
Q ss_pred HHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChH
Q 020518 195 RKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPD 274 (325)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 274 (325)
. .....+..++ +|+++|+|++|..+++.
T Consensus 155 -----------~---------------------------------------~~~~~~~~i~--~P~lii~G~~D~~~~~~ 182 (258)
T 2fx5_A 155 -----------G---------------------------------------HDSASQRRQQ--GPMFLMSGGGDTIAFPY 182 (258)
T ss_dssp -----------T---------------------------------------CCGGGGGCCS--SCEEEEEETTCSSSCHH
T ss_pred -----------c---------------------------------------cchhhhccCC--CCEEEEEcCCCcccCch
Confidence 0 0001223333 79999999999999987
Q ss_pred H-HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 275 V-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 275 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
. .+.+.+... +++++++++++||+.+.++++++.+.|.+||+
T Consensus 183 ~~~~~~~~~~~-------~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~ 225 (258)
T 2fx5_A 183 LNAQPVYRRAN-------VPVFWGERRYVSHFEPVGSGGAYRGPSTAWFR 225 (258)
T ss_dssp HHTHHHHHHCS-------SCEEEEEESSCCTTSSTTTCGGGHHHHHHHHH
T ss_pred hhHHHHHhccC-------CCeEEEEECCCCCccccchHHHHHHHHHHHHH
Confidence 5 555555421 13899999999999999999999999999997
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-22 Score=184.31 Aligned_cols=224 Identities=13% Similarity=0.016 Sum_probs=150.3
Q ss_pred ccc-cceEEEEcccCCC--CCCCceEEEecCCCCCC---CChHH----HHHHHHhhhhccCCCCceEEEEeCCCCCCCCC
Q 020518 25 RSL-QTLAYEEVRSSSD--RPYTSTAFVLHGLLGSG---RNWRS----FSRNLASTLSQTSASSEWRMVLVDLRNHGRSA 94 (325)
Q Consensus 25 ~~~-~~l~y~~~~~~~~--~~~~~~vv~~HG~~~~~---~~~~~----~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~ 94 (325)
.+| ..+.+..+.+... ....|+||++||.+.+. ..|.. ++..|++ .||.|+++|+||+|.|.
T Consensus 463 ~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~--------~G~~v~~~d~rG~g~s~ 534 (706)
T 2z3z_A 463 ADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQ--------KGYAVFTVDSRGSANRG 534 (706)
T ss_dssp TTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHH--------TTCEEEEECCTTCSSSC
T ss_pred CCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHh--------CCcEEEEEecCCCcccc
Confidence 366 7888888876532 23358899999987765 45765 5778876 89999999999999886
Q ss_pred CCCCC--CCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 95 EIEGL--DPPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 95 ~~~~~--~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+... ..... ....+|+.+.++.+ +.+ +++++||||||.+++.+|.++|+ +++++|++++..
T Consensus 535 ~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~~~~ 604 (706)
T 2z3z_A 535 AAFEQVIHRRLG-QTEMADQMCGVDFLKSQSWVDAD-RIGVHGWSYGGFMTTNLMLTHGD--------VFKVGVAGGPVI 604 (706)
T ss_dssp HHHHHTTTTCTT-HHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHSTT--------TEEEEEEESCCC
T ss_pred hhHHHHHhhccC-CccHHHHHHHHHHHHhCCCCCch-heEEEEEChHHHHHHHHHHhCCC--------cEEEEEEcCCcc
Confidence 53110 01111 23345555555544 245 89999999999999999999999 999999998764
Q ss_pred CCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
..... . ......+... .. . ....+. ..+
T Consensus 605 ~~~~~----------------------~-~~~~~~~~~~--~~-------------~-------~~~~~~-------~~~ 632 (706)
T 2z3z_A 605 DWNRY----------------------A-IMYGERYFDA--PQ-------------E-------NPEGYD-------AAN 632 (706)
T ss_dssp CGGGS----------------------B-HHHHHHHHCC--TT-------------T-------CHHHHH-------HHC
T ss_pred chHHH----------------------H-hhhhhhhcCC--cc-------------c-------Chhhhh-------hCC
Confidence 21100 0 0000000000 00 0 000000 001
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+..++ +|+|+|+|++|..++++..+.+.+.+...+. ++++++++++||.++.++++++.+.|.+||++
T Consensus 633 ~~~~~~~i~--~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 704 (706)
T 2z3z_A 633 LLKRAGDLK--GRLMLIHGAIDPVVVWQHSLLFLDACVKART----YPDYYVYPSHEHNVMGPDRVHLYETITRYFTD 704 (706)
T ss_dssp GGGGGGGCC--SEEEEEEETTCSSSCTHHHHHHHHHHHHHTC----CCEEEEETTCCSSCCTTHHHHHHHHHHHHHHH
T ss_pred HhHhHHhCC--CCEEEEeeCCCCCCCHHHHHHHHHHHHHCCC----CeEEEEeCCCCCCCCcccHHHHHHHHHHHHHH
Confidence 122334444 7999999999999999888888887765432 27999999999999988999999999999964
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=166.28 Aligned_cols=245 Identities=16% Similarity=0.049 Sum_probs=146.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
+|..+.+..+.+.......|+||++||.+ ++.. .|..+...|++ .||.|+++|+||+|.|.....
T Consensus 91 ~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~--------~g~~vv~~d~r~~gg~~~~~~-- 160 (361)
T 1jkm_A 91 DGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA--------AGSVVVMVDFRNAWTAEGHHP-- 160 (361)
T ss_dssp TSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHH--------TTCEEEEEECCCSEETTEECC--
T ss_pred CCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHh--------CCCEEEEEecCCCCCCCCCCC--
Confidence 45467766665543322468999999987 7777 78888888987 899999999999976643221
Q ss_pred CCCCHHHH---HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH-----ccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 101 PPHDIANA---ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS-----CARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 101 ~~~~~~~~---~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~-----~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
....+.+. ++++.+.+++++.+ +++|+|||+||.+++.++.+ +|+ +++++|++++.......
T Consensus 161 ~~~~~~D~~~~~~~v~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~~~p~--------~i~~~il~~~~~~~~~~- 230 (361)
T 1jkm_A 161 FPSGVEDCLAAVLWVDEHRESLGLS-GVVVQGESGGGNLAIATTLLAKRRGRLD--------AIDGVYASIPYISGGYA- 230 (361)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEE-EEEEEEETHHHHHHHHHHHHHHHTTCGG--------GCSEEEEESCCCCCCTT-
T ss_pred CCccHHHHHHHHHHHHhhHHhcCCC-eEEEEEECHHHHHHHHHHHHHHhcCCCc--------CcceEEEECCccccccc-
Confidence 22223333 55555556667888 99999999999999999998 787 89999999987543111
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCc-ccccccChhHHHHhhhcccCCcccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGE-RETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
............+........ ......++...+..... ........ . ......+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~p---------~--~~~~~~l 285 (361)
T 1jkm_A 231 WDHERRLTELPSLVENDGYFI--------------ENGGMALLVRAYDPTGEHAEDPIAWP---------Y--FASEDEL 285 (361)
T ss_dssp SCHHHHHHHCTHHHHTTTSSS--------------CHHHHHHHHHHHSSSSTTTTCTTTCG---------G--GCCHHHH
T ss_pred cccccccccCcchhhccCccc--------------CHHHHHHHHHHhCCCCCCCCCcccCc---------c--ccChhhH
Confidence 000000000000000000000 11111111111110000 00000000 0 0011223
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-c-----cCh-HHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-V-----DNP-KGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~-----e~p-~~~~~~i~~fl~~ 324 (325)
..++ |+++++|++|..++ ..+.+.+.+...+. ++++++++++||.++ . +.+ +++.+.|.+||++
T Consensus 286 ~~l~---P~Lii~G~~D~~~~--~~~~~~~~l~~~g~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~ 356 (361)
T 1jkm_A 286 RGLP---PFVVAVNELDPLRD--EGIAFARRLARAGV----DVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAAD 356 (361)
T ss_dssp TTCC---CEEEEEETTCTTHH--HHHHHHHHHHHTTC----CEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHH
T ss_pred cCCC---ceEEEEcCcCcchh--hHHHHHHHHHHcCC----CEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHH
Confidence 3332 99999999998876 44556666655332 389999999999887 3 344 8899999999974
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=165.31 Aligned_cols=239 Identities=17% Similarity=0.095 Sum_probs=139.6
Q ss_pred ceEEEEcccCCCCCCCceEEEecC---CCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHG---LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+.++.+.+.......|+||++|| ++++...|..++..|++. .||.|+++|+||+|.+..+. ...+.
T Consensus 59 ~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~-------~g~~v~~~d~rg~~~~~~~~---~~~d~ 128 (310)
T 2hm7_A 59 TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKD-------GRAVVFSVDYRLAPEHKFPA---AVEDA 128 (310)
T ss_dssp EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH-------HTSEEEEECCCCTTTSCTTH---HHHHH
T ss_pred eEEEEEEecCCCCCCCCEEEEECCCccccCChhHhHHHHHHHHHh-------cCCEEEEeCCCCCCCCCCCc---cHHHH
Confidence 677777766432345789999999 788899999999999862 38999999999999764421 01111
Q ss_pred HHHHHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 106 ANAANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
.+.++.+.+..+.++ .+ +++|+||||||.+|+.+|.++|+.. ..+++++|++++........... ....
T Consensus 129 ~~~~~~l~~~~~~~~~~~~-~i~l~G~S~GG~la~~~a~~~~~~~----~~~v~~~vl~~p~~~~~~~~~~~----~~~~ 199 (310)
T 2hm7_A 129 YDALQWIAERAADFHLDPA-RIAVGGDSAGGNLAAVTSILAKERG----GPALAFQLLIYPSTGYDPAHPPA----SIEE 199 (310)
T ss_dssp HHHHHHHHHTTGGGTEEEE-EEEEEEETHHHHHHHHHHHHHHHTT----CCCCCCEEEESCCCCCCTTSCCH----HHHH
T ss_pred HHHHHHHHhhHHHhCCCcc-eEEEEEECHHHHHHHHHHHHHHhcC----CCCceEEEEEcCCcCCCcccCCc----chhh
Confidence 112222222222223 35 8999999999999999999988611 11599999999875432111100 0000
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
.. ....... ....++...+........ ..+........+..+ .|++++
T Consensus 200 -~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~------------~~~~~p~~~~~l~~~---~P~lii 247 (310)
T 2hm7_A 200 -NA--EGYLLTG--------------GMMLWFRDQYLNSLEELT------------HPWFSPVLYPDLSGL---PPAYIA 247 (310)
T ss_dssp -TS--SSSSSCH--------------HHHHHHHHHHCSSGGGGG------------CTTTCGGGCSCCTTC---CCEEEE
T ss_pred -cC--CCCCCCH--------------HHHHHHHHHhCCCCCccC------------CccCCCCcCccccCC---CCEEEE
Confidence 00 0000011 111111111100000000 000000001122222 399999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-----cChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~ 324 (325)
+|++|..+ .....+.+.+...+. ++++++++++||.+.. +.++++.+.+.+||++
T Consensus 248 ~G~~D~~~--~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 307 (310)
T 2hm7_A 248 TAQYDPLR--DVGKLYAEALNKAGV----KVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRD 307 (310)
T ss_dssp EEEECTTH--HHHHHHHHHHHHTTC----CEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred EecCCCch--HHHHHHHHHHHHCCC----CEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHH
Confidence 99999887 345556566655432 3899999999996653 5678999999999964
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=166.39 Aligned_cols=234 Identities=17% Similarity=0.120 Sum_probs=144.6
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+.++.+ +. ....|+||++||++ ++...|..++..|+.. .||.|+++|+||+|.|..+. ...+.
T Consensus 67 ~i~~~~y-~~--~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~-------~g~~Vv~~dyrg~g~~~~p~---~~~d~ 133 (311)
T 1jji_A 67 DIRVRVY-QQ--KPDSPVLVYYHGGGFVICSIESHDALCRRIARL-------SNSTVVSVDYRLAPEHKFPA---AVYDC 133 (311)
T ss_dssp EEEEEEE-ES--SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH-------HTSEEEEEECCCTTTSCTTH---HHHHH
T ss_pred cEEEEEE-cC--CCCceEEEEECCcccccCChhHhHHHHHHHHHH-------hCCEEEEecCCCCCCCCCCC---cHHHH
Confidence 5655555 21 23578999999999 7888999999999842 68999999999999987653 23455
Q ss_pred HHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 106 ANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
.+.++++.+.+++++++ .+++|+|||+||.+|+.++.++|+.. ..+++++|++++........ .....
T Consensus 134 ~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~----~~~~~~~vl~~p~~~~~~~~------~~~~~- 202 (311)
T 1jji_A 134 YDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSG----EDFIKHQILIYPVVNFVAPT------PSLLE- 202 (311)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT----CCCEEEEEEESCCCCSSSCC------HHHHH-
T ss_pred HHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcC----CCCceEEEEeCCccCCCCCC------ccHHH-
Confidence 66666777777766653 27999999999999999999988710 01399999999875432111 00100
Q ss_pred hhcCCCCC-CcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 185 LQSLPSSI-PSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 185 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
.. .... ... ....++...+....... ... +. ......+..+ .|++++
T Consensus 203 ~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~---~~~---------~~-~p~~~~l~~~---~P~li~ 250 (311)
T 1jji_A 203 FG--EGLWILDQ--------------KIMSWFSEQYFSREEDK---FNP---------LA-SVIFADLENL---PPALII 250 (311)
T ss_dssp TS--SSCSSCCH--------------HHHHHHHHHHCSSGGGG---GCT---------TT-SGGGSCCTTC---CCEEEE
T ss_pred hc--CCCccCCH--------------HHHHHHHHHhCCCCccC---CCc---------cc-CcccccccCC---ChheEE
Confidence 00 0000 111 11111111110000000 000 00 0001122222 499999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-----ChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-----NPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl~~ 324 (325)
+|++|..++ ....+.+.+...+. +++++++++++|.++.. ..+++.+.+.+||++
T Consensus 251 ~G~~D~l~~--~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 251 TAEYDPLRD--EGEVFGQMLRRAGV----EASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEECTTHH--HHHHHHHHHHHTTC----CEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EcCcCcchH--HHHHHHHHHHHcCC----CEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 999998874 23444444444332 39999999999987754 347899999999975
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=153.94 Aligned_cols=192 Identities=14% Similarity=0.086 Sum_probs=133.6
Q ss_pred EEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC---CCCCCCCCHHHH
Q 020518 32 YEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI---EGLDPPHDIANA 108 (325)
Q Consensus 32 y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~ 108 (325)
+...|.+ ..+.+++|||+||++++...|..+.+.|.. .++.|+++|.+|++--+.. ........+++.
T Consensus 11 ~~~~g~P-~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~--------~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~ 81 (210)
T 4h0c_A 11 IITSGVP-VQRAKKAVVMLHGRGGTAADIISLQKVLKL--------DEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSA 81 (210)
T ss_dssp EEEEESC-TTTCSEEEEEECCTTCCHHHHHGGGGTSSC--------TTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHH
T ss_pred ceeCCCC-cccCCcEEEEEeCCCCCHHHHHHHHHHhCC--------CCeEEEeecCCCCCccccccCCCcccchHHHHHH
Confidence 4455553 234578999999999998888877776664 7999999999987632111 100012345555
Q ss_pred HHHHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 109 ANDLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 109 ~~~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
.+.+..+++. .+ .+ +++|+|+|+||.+++.++.++|+ ++.++|.+++........
T Consensus 82 ~~~i~~~~~~~~~~~i~~~-ri~l~G~S~Gg~~a~~~a~~~p~--------~~~~vv~~sg~l~~~~~~----------- 141 (210)
T 4h0c_A 82 LALVGEVVAEIEAQGIPAE-QIYFAGFSQGACLTLEYTTRNAR--------KYGGIIAFTGGLIGQELA----------- 141 (210)
T ss_dssp HHHHHHHHHHHHHTTCCGG-GEEEEEETHHHHHHHHHHHHTBS--------CCSEEEEETCCCCSSSCC-----------
T ss_pred HHHHHHHHHHHHHhCCChh-hEEEEEcCCCcchHHHHHHhCcc--------cCCEEEEecCCCCChhhh-----------
Confidence 5555555543 33 34 89999999999999999999999 999999987642111000
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
. ........++|++++
T Consensus 142 ------------------------------------------------~----------------~~~~~~~~~~Pvl~~ 157 (210)
T 4h0c_A 142 ------------------------------------------------I----------------GNYKGDFKQTPVFIS 157 (210)
T ss_dssp ------------------------------------------------G----------------GGCCBCCTTCEEEEE
T ss_pred ------------------------------------------------h----------------hhhhhhccCCceEEE
Confidence 0 000000123699999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|++|+++|.+..+.+.+.+...+. +++++++|+.||.+. +++ .+.|.+||.+
T Consensus 158 hG~~D~~vp~~~~~~~~~~L~~~g~----~v~~~~ypg~gH~i~---~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 158 TGNPDPHVPVSRVQESVTILEDMNA----AVSQVVYPGRPHTIS---GDE-IQLVNNTILK 210 (210)
T ss_dssp EEESCTTSCHHHHHHHHHHHHHTTC----EEEEEEEETCCSSCC---HHH-HHHHHHTTTC
T ss_pred ecCCCCccCHHHHHHHHHHHHHCCC----CeEEEEECCCCCCcC---HHH-HHHHHHHHcC
Confidence 9999999999999888888877654 389999999999874 444 4578888863
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=172.56 Aligned_cols=235 Identities=11% Similarity=0.098 Sum_probs=141.8
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.+....+.+.. ....|+||++||++++...+ .+..|++ .||.|+++|+||+|.+.... ....++++
T Consensus 160 ~l~~~l~~P~~-~~~~P~Vv~lhG~~~~~~~~--~a~~La~--------~Gy~Vla~D~rG~~~~~~~~---~~~~~~d~ 225 (446)
T 3hlk_A 160 RVRGTLFLPPE-PGPFPGIVDMFGTGGGLLEY--RASLLAG--------KGFAVMALAYYNYEDLPKTM---ETLHLEYF 225 (446)
T ss_dssp TEEEEEEECSS-SCCBCEEEEECCSSCSCCCH--HHHHHHT--------TTCEEEEECCSSSTTSCSCC---SEEEHHHH
T ss_pred eEEEEEEeCCC-CCCCCEEEEECCCCcchhhH--HHHHHHh--------CCCEEEEeccCCCCCCCcch---hhCCHHHH
Confidence 56655555432 24568999999998764443 4777876 89999999999999887654 23556666
Q ss_pred HHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 109 ANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 109 ~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
.+.+..+.+..++ + ++.|+||||||.+|+.+|.++|+ |+++|++++............ . .
T Consensus 226 ~~a~~~l~~~~~vd~~-~i~l~G~S~GG~lAl~~A~~~p~---------v~a~V~~~~~~~~~~~~~~~~-------~-~ 287 (446)
T 3hlk_A 226 EEAMNYLLSHPEVKGP-GVGLLGISKGGELCLSMASFLKG---------ITAAVVINGSVANVGGTLRYK-------G-E 287 (446)
T ss_dssp HHHHHHHHTSTTBCCS-SEEEEEETHHHHHHHHHHHHCSC---------EEEEEEESCCSBCCSSEEEET-------T-E
T ss_pred HHHHHHHHhCCCCCCC-CEEEEEECHHHHHHHHHHHhCCC---------ceEEEEEcCcccccCCCcccc-------C-c
Confidence 6666665555443 5 89999999999999999999985 899999987643221100000 0 0
Q ss_pred cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 187 SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
..+...... . .. ..... ....+..... .... .........+.+++ +|+|+|+|+
T Consensus 288 ~~~~~~~~~--------------~---~~--~~~~~-~~~~~~~~~~---~~~~-~~~~~~~~~~~~i~--~PvLii~G~ 341 (446)
T 3hlk_A 288 TLPPVGVNR--------------N---RI--KVTKD-GYADIVDVLN---SPLE-GPDQKSFIPVERAE--STFLFLVGQ 341 (446)
T ss_dssp EECCCCBCG--------------G---GC--EECSS-SCEECTTCBC---CTTS-GGGGGGBCCGGGCC--SEEEEEEET
T ss_pred cCCccccch--------------h---cc--ccccc-hHHHHHHHHh---chhh-ccccccccCHHHCC--CCEEEEEeC
Confidence 000000000 0 00 00000 0000000000 0000 00001111234444 899999999
Q ss_pred CCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCcccc----------------------------ccChHHHHHH
Q 020518 267 KSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH----------------------------VDNPKGLLEI 317 (325)
Q Consensus 267 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----------------------------~e~p~~~~~~ 317 (325)
+|..+++.. .+.+.+.+...+. +++++++++++||.+. .+.++++.+.
T Consensus 342 ~D~~vp~~~~~~~~~~~l~~~g~---~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~ 418 (446)
T 3hlk_A 342 DDHNWKSEFYANEACKRLQAHGR---RKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQ 418 (446)
T ss_dssp TCCSSCHHHHHHHHHHHHHHTTC---CCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHH
T ss_pred CCCCcChHHHHHHHHHHHHHcCC---CCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHH
Confidence 999999844 3566766665432 2279999999999982 2347788899
Q ss_pred HHHHHhc
Q 020518 318 VAPRIAS 324 (325)
Q Consensus 318 i~~fl~~ 324 (325)
|.+||++
T Consensus 419 i~~Fl~~ 425 (446)
T 3hlk_A 419 LQTFFHK 425 (446)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=157.44 Aligned_cols=214 Identities=13% Similarity=0.053 Sum_probs=135.2
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC------CCC----CCC----CCCCCCCHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG------RSA----EIE----GLDPPHDIANA 108 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G------~S~----~~~----~~~~~~~~~~~ 108 (325)
+++||||+||++++...|..+++.|.+... ....+++++..++| .+. .+. -....++++++
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~~~~-----~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMNEYR-----SSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDW 76 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHHTTC-----CCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHH
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHHhcC-----CCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHH
Confidence 367899999999999999999999997320 01244444444333 221 220 00135689999
Q ss_pred HHHH----HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 109 ANDL----ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 109 ~~~l----~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++ ..+.+.++.+ ++++|||||||++++.++.++|+.. ...+|+++|+++++...... ...
T Consensus 77 a~~l~~~i~~l~~~~~~~-~~~lvGHS~Gg~ia~~~~~~~~~~~---~~~~v~~lv~i~~p~~g~~~----------~~~ 142 (254)
T 3ds8_A 77 SKWLKIAMEDLKSRYGFT-QMDGVGHSNGGLALTYYAEDYAGDK---TVPTLRKLVAIGSPFNDLDP----------NDN 142 (254)
T ss_dssp HHHHHHHHHHHHHHHCCS-EEEEEEETHHHHHHHHHHHHSTTCT---TSCEEEEEEEESCCTTCSCH----------HHH
T ss_pred HHHHHHHHHHHHHHhCCC-ceEEEEECccHHHHHHHHHHccCCc---cccceeeEEEEcCCcCcccc----------ccc
Confidence 9999 4445566888 9999999999999999999998611 01168999999986433210 000
Q ss_pred hhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEe
Q 020518 185 LQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
... ....... .....+..+.. ....++.++|++.|+
T Consensus 143 ~~~-------------------------------~~~~~~p----~~~~~~~~~~~---------~~~~~~~~~~vl~I~ 178 (254)
T 3ds8_A 143 GMD-------------------------------LSFKKLP----NSTPQMDYFIK---------NQTEVSPDLEVLAIA 178 (254)
T ss_dssp CSC-------------------------------TTCSSCS----SCCHHHHHHHH---------TGGGSCTTCEEEEEE
T ss_pred ccc-------------------------------cccccCC----cchHHHHHHHH---------HHhhCCCCcEEEEEE
Confidence 000 0000000 00011111111 111222348999999
Q ss_pred eC------CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC--CCccccccChHHHHHHHHHHHhc
Q 020518 265 AE------KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN--AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 265 g~------~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|. .|..+|....+.++.+++.... ..+..++.+ ++|..+.++|+ +.+.|..||++
T Consensus 179 G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~----~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~ 241 (254)
T 3ds8_A 179 GELSEDNPTDGIVPTISSLATRLFMPGSAK----AYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEK 241 (254)
T ss_dssp EESBTTBCBCSSSBHHHHTGGGGTSBTTBS----EEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHT
T ss_pred ecCCCCCCCCcEeeHHHHHHHHHHhhccCc----ceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHH
Confidence 99 9999999888777776664221 145556665 77999999985 99999999975
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.5e-22 Score=160.92 Aligned_cols=210 Identities=16% Similarity=0.161 Sum_probs=133.7
Q ss_pred cccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC---
Q 020518 26 SLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL--- 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~--- 99 (325)
.+..+.+..+.+... ....|+||++||++++...|... +..+... .||.|+++|.||+|.|......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~-------~g~~vv~~d~~g~G~s~~~~~~~~~ 97 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASE-------LGLVVVCPDTSPRGNDVPDELTNWQ 97 (278)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH-------HTCEEEECCSSCCSTTSCCCTTCTT
T ss_pred cCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhh-------CCeEEEecCCcccCccccccccccc
Confidence 466777777766432 34578999999999999888773 3333331 5899999999999988653310
Q ss_pred ----------------CCCCC-HHHHHHHHHHHHHHh-CC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceE
Q 020518 100 ----------------DPPHD-IANAANDLANLVKAK-GW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQL 159 (325)
Q Consensus 100 ----------------~~~~~-~~~~~~~l~~~l~~~-~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l 159 (325)
...+. .+.+++++..++++. ++ + +++|+||||||.+|+.+|.++|+ +++++
T Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~ 168 (278)
T 3e4d_A 98 MGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMS-RQSIFGHSMGGHGAMTIALKNPE--------RFKSC 168 (278)
T ss_dssp SBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEE-EEEEEEETHHHHHHHHHHHHCTT--------TCSCE
T ss_pred ccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcC-CeEEEEEChHHHHHHHHHHhCCc--------ccceE
Confidence 01112 334456788888766 55 5 89999999999999999999999 99999
Q ss_pred EEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhh
Q 020518 160 WVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMF 239 (325)
Q Consensus 160 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (325)
+++++............ .. ..++... ...+.
T Consensus 169 v~~~~~~~~~~~~~~~~---------------------~~------------~~~~~~~------~~~~~---------- 199 (278)
T 3e4d_A 169 SAFAPIVAPSSADWSEP---------------------AL------------EKYLGAD------RAAWR---------- 199 (278)
T ss_dssp EEESCCSCGGGCTTTHH---------------------HH------------HHHHCSC------GGGGG----------
T ss_pred EEeCCcccccCCccchh---------------------hH------------HHhcCCc------HHHHH----------
Confidence 99998643221110000 00 0011000 00000
Q ss_pred hcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 240 NSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
..+....+......+|+++++|++|..++... .+.+.+.+...+. +++++++++++|....
T Consensus 200 ----~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~ 261 (278)
T 3e4d_A 200 ----RYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDI----GLTLRMHDRYDHSYYF 261 (278)
T ss_dssp ----GGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSC----EEEEEEETTCCSSHHH
T ss_pred ----hcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCC----CceEEEeCCCCcCHHH
Confidence 00111111222234699999999999887522 4556666655433 3899999999997543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-23 Score=169.92 Aligned_cols=228 Identities=11% Similarity=0.006 Sum_probs=140.3
Q ss_pred ceEEEEcccCCCCCCCceEEEecCC---CCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGL---LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+.+..+.+.......|+|||+||. .++...|..++..|.+ +||.|+++|+||+|.+..+. ...+.
T Consensus 67 ~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~r~~~~~~~~~---~~~d~ 135 (303)
T 4e15_A 67 RQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVR--------RGYRVAVMDYNLCPQVTLEQ---LMTQF 135 (303)
T ss_dssp TCEEEEEECTTCCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHH--------TTCEEEEECCCCTTTSCHHH---HHHHH
T ss_pred CcEEEEEecCCCCCCCCEEEEECCCcCcCCChhHHHHHHHHHHh--------CCCEEEEecCCCCCCCChhH---HHHHH
Confidence 3344444443333567999999994 4555667778888887 89999999999998753321 11122
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
.+.++.+.+..+.++.+ +++|+||||||.+++.++.+.+..... ...+++++|++++..... .....
T Consensus 136 ~~~~~~l~~~~~~~~~~-~i~l~G~S~GG~la~~~a~~~~~~~~p-~~~~v~~~v~~~~~~~~~----------~~~~~- 202 (303)
T 4e15_A 136 THFLNWIFDYTEMTKVS-SLTFAGHXAGAHLLAQILMRPNVITAQ-RSKMVWALIFLCGVYDLR----------ELSNL- 202 (303)
T ss_dssp HHHHHHHHHHHHHTTCS-CEEEEEETHHHHHHGGGGGCTTTSCHH-HHHTEEEEEEESCCCCCH----------HHHTC-
T ss_pred HHHHHHHHHHhhhcCCC-eEEEEeecHHHHHHHHHHhccccccCc-ccccccEEEEEeeeeccH----------hhhcc-
Confidence 22233333333466777 999999999999999999865320000 001799999998764321 00000
Q ss_pred hcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCC--CCCCcEEEE
Q 020518 186 QSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHP--PQGMEIAIV 263 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~i 263 (325)
.. .....++. .. .... .... .....+..+ ...+|++++
T Consensus 203 ---~~------------------~~~~~~~~----~~---------~~~~----~~~s--p~~~~~~~~~~~~~~P~lii 242 (303)
T 4e15_A 203 ---ES------------------VNPKNILG----LN---------ERNI----ESVS--PMLWEYTDVTVWNSTKIYVV 242 (303)
T ss_dssp ---TT------------------TSGGGTTC----CC---------TTTT----TTTC--GGGCCCCCGGGGTTSEEEEE
T ss_pred ---cc------------------cchhhhhc----CC---------HHHH----HHcC--chhhcccccccCCCCCEEEE
Confidence 00 00000000 00 0000 0000 000111111 124899999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|++|..++....+.+.+.++..+. ++++++++++||+.+++.+...+..+.+||..
T Consensus 243 ~G~~D~~v~~~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 243 AAEHDSTTFIEQSRHYADVLRKKGY----KASFTLFKGYDHFDIIEETAIDDSDVSRFLRN 299 (303)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHTC----CEEEEEEEEEETTHHHHGGGSTTSHHHHHHHH
T ss_pred EeCCCCCCchHHHHHHHHHHHHCCC----ceEEEEeCCCCchHHHHHHhCCCcHHHHHHHH
Confidence 9999999999888888888876443 28999999999999999999888888888753
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=182.95 Aligned_cols=225 Identities=15% Similarity=0.104 Sum_probs=151.2
Q ss_pred ccc-cceEEEEcccCC--CCCCCceEEEecCCCCCC---CChH-----HHHHHHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 25 RSL-QTLAYEEVRSSS--DRPYTSTAFVLHGLLGSG---RNWR-----SFSRNLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 25 ~~~-~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~---~~~~-----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
.+| ..+.|..+.+.. +....|+||++||++++. ..|. .++..|++ .||.|+++|+||+|.|
T Consensus 495 ~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~g~s 566 (741)
T 2ecf_A 495 ADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQ--------QGYVVFSLDNRGTPRR 566 (741)
T ss_dssp TTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHH--------TTCEEEEECCTTCSSS
T ss_pred CCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHh--------CCCEEEEEecCCCCCC
Confidence 467 889999887653 223468899999998874 4565 67888876 8999999999999997
Q ss_pred CCCCCCCC-----CCCHHHHHHHHHHHHHH--hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 94 AEIEGLDP-----PHDIANAANDLANLVKA--KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 94 ~~~~~~~~-----~~~~~~~~~~l~~~l~~--~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
..+..... ...++++.+.+..+.+. ++.+ +++++||||||.+++.++.++|+ +++++|++++..
T Consensus 567 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~~~~ 637 (741)
T 2ecf_A 567 GRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPA-RIGVQGWSNGGYMTLMLLAKASD--------SYACGVAGAPVT 637 (741)
T ss_dssp CHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHCTT--------TCSEEEEESCCC
T ss_pred ChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChh-hEEEEEEChHHHHHHHHHHhCCC--------ceEEEEEcCCCc
Confidence 64311000 11233443333333332 1345 89999999999999999999999 999999998764
Q ss_pred CCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
..... .. .....+... ... ....+ .. .+
T Consensus 638 ~~~~~----------------------~~-~~~~~~~~~--~~~--------------------~~~~~----~~---~~ 665 (741)
T 2ecf_A 638 DWGLY----------------------DS-HYTERYMDL--PAR--------------------NDAGY----RE---AR 665 (741)
T ss_dssp CGGGS----------------------BH-HHHHHHHCC--TGG--------------------GHHHH----HH---HC
T ss_pred chhhh----------------------cc-ccchhhcCC--ccc--------------------Chhhh----hh---cC
Confidence 32100 00 000000000 000 00000 00 01
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+..++ +|+++++|++|..++++..+.+.+.++..+. ++++++++++||.++.+.++++.+.|.+||++
T Consensus 666 ~~~~~~~i~--~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 737 (741)
T 2ecf_A 666 VLTHIEGLR--SPLLLIHGMADDNVLFTNSTSLMSALQKRGQ----PFELMTYPGAKHGLSGADALHRYRVAEAFLGR 737 (741)
T ss_dssp SGGGGGGCC--SCEEEEEETTCSSSCTHHHHHHHHHHHHTTC----CCEEEEETTCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCC--CCEEEEccCCCCCCCHHHHHHHHHHHHHCCC----ceEEEEECCCCCCCCCCchhHHHHHHHHHHHH
Confidence 112334444 7999999999999999988888888776432 27999999999999988889999999999964
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-21 Score=174.49 Aligned_cols=231 Identities=13% Similarity=-0.016 Sum_probs=155.4
Q ss_pred cccceEEEEcccCCC------CCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCC---CCCCC
Q 020518 26 SLQTLAYEEVRSSSD------RPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRN---HGRSA 94 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~------~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G---~G~S~ 94 (325)
+|..+.+..+.+... ....|+||++||++++.. .|..++..|++ +||.|+++|+|| ||.+.
T Consensus 400 dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~~~~G~~~ 471 (662)
T 3azo_A 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTS--------RGIGVADVNYGGSTGYGRAY 471 (662)
T ss_dssp TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHT--------TTCEEEEEECTTCSSSCHHH
T ss_pred CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHh--------CCCEEEEECCCCCCCccHHH
Confidence 677888887766432 245688999999987665 78888888887 899999999999 77764
Q ss_pred CCCC--CCCCCCHHHHHHHHHHHHHH--hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 95 EIEG--LDPPHDIANAANDLANLVKA--KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 95 ~~~~--~~~~~~~~~~~~~l~~~l~~--~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
.... .....+++++++.+..++++ ++.+ +++|+||||||.+++.++.. |+ +++++|++++....
T Consensus 472 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~-~i~l~G~S~GG~~a~~~~~~-~~--------~~~~~v~~~~~~~~-- 539 (662)
T 3azo_A 472 RERLRGRWGVVDVEDCAAVATALAEEGTADRA-RLAVRGGSAGGWTAASSLVS-TD--------VYACGTVLYPVLDL-- 539 (662)
T ss_dssp HHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTT-CEEEEEETHHHHHHHHHHHH-CC--------CCSEEEEESCCCCH--
T ss_pred HHhhccccccccHHHHHHHHHHHHHcCCcChh-hEEEEEECHHHHHHHHHHhC-cC--------ceEEEEecCCccCH--
Confidence 3211 00234578888888888887 5666 99999999999999998885 88 99999999875321
Q ss_pred CCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
...... ... . ....... .++... . .....+. .......
T Consensus 540 --------~~~~~~--~~~-~--~~~~~~~------------~~~~~~----~------~~~~~~~-------~~sp~~~ 577 (662)
T 3azo_A 540 --------LGWADG--GTH-D--FESRYLD------------FLIGSF----E------EFPERYR-------DRAPLTR 577 (662)
T ss_dssp --------HHHHTT--CSC-G--GGTTHHH------------HHTCCT----T------TCHHHHH-------HTCGGGG
T ss_pred --------HHHhcc--ccc-c--hhhHhHH------------HHhCCC----c------cchhHHH-------hhChHhH
Confidence 110000 000 0 0000000 000000 0 0001110 0111223
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
+..++ +|+|+++|++|..+++...+.+.+.++..+. ++++++++++||.+. .++++++.+.+.+||++
T Consensus 578 ~~~~~--~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~----~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 646 (662)
T 3azo_A 578 ADRVR--VPFLLLQGLEDPVCPPEQCDRFLEAVAGCGV----PHAYLSFEGEGHGFRRKETMVRALEAELSLYAQ 646 (662)
T ss_dssp GGGCC--SCEEEEEETTCSSSCTHHHHHHHHHHTTSCC----CEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred hccCC--CCEEEEeeCCCCCCCHHHHHHHHHHHHHcCC----CEEEEEECCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 34444 7999999999999999988888888876443 279999999999874 46788999999999864
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=164.27 Aligned_cols=248 Identities=14% Similarity=0.101 Sum_probs=134.6
Q ss_pred cccceEEEEcccCCC---CCCCceEEEecCCCCCC---CC--hHHHHHHHH-hhhhccCCCCceEEEEeCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSD---RPYTSTAFVLHGLLGSG---RN--WRSFSRNLA-STLSQTSASSEWRMVLVDLRNHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~---~~~~~~vv~~HG~~~~~---~~--~~~~~~~l~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 96 (325)
.+..+.++.+.+... ....|+||++||.+... .. |..++..|+ + .||.|+++|+||++.+..
T Consensus 62 ~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~--------~g~~vv~~d~rg~~~~~~- 132 (338)
T 2o7r_A 62 PLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVH--------AGVVIASVDYRLAPEHRL- 132 (338)
T ss_dssp TTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH--------HTCEEEEEECCCTTTTCT-
T ss_pred CCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHH--------CCcEEEEecCCCCCCCCC-
Confidence 344555555544321 24568899999987432 22 788888887 4 689999999999876533
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH--------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 97 EGLDPPHDIANAANDLANLVKA--------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~--------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
...+++..+.+..+.+. ++.+ +++|+||||||.+|+.+|.++|+...+....+|+++|++++....
T Consensus 133 -----~~~~~d~~~~~~~l~~~~~~~~~~~~d~~-~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~ 206 (338)
T 2o7r_A 133 -----PAAYDDAMEALQWIKDSRDEWLTNFADFS-NCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGG 206 (338)
T ss_dssp -----THHHHHHHHHHHHHHTCCCHHHHHHEEEE-EEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCC
T ss_pred -----chHHHHHHHHHHHHHhCCcchhhccCCcc-eEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCC
Confidence 12233333333333322 2336 899999999999999999998740000000169999999886543
Q ss_pred CCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccc
Q 020518 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYW 248 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
.... . ..... ......... ....+. ..+......... ...+... ........
T Consensus 207 ~~~~--~----~~~~~---~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~----~~~~~~~------~~~~~~~~ 258 (338)
T 2o7r_A 207 SKRT--G----SELRL---ANDSRLPTF-VLDLIW--------ELSLPMGADRDH----EYCNPTA------ESEPLYSF 258 (338)
T ss_dssp SSCC--H----HHHHT---TTCSSSCHH-HHHHHH--------HHHSCTTCCTTS----TTTCCC----------CCTHH
T ss_pred CcCC--h----hhhcc---CCCcccCHH-HHHHHH--------HHhCCCCCCCCC----cccCCCC------CCcccccH
Confidence 2111 1 00000 000000100 000000 000000000000 0000000 00000000
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh---HHHHHHHHHHHhc
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP---KGLLEIVAPRIAS 324 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 324 (325)
..+..++ +|+|+++|++|..++. ...+.+.+...+ +++++++++++||.+++++| +++.+.|.+||++
T Consensus 259 ~~l~~~~--~P~Lvi~G~~D~~~~~--~~~~~~~l~~~~----~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~ 329 (338)
T 2o7r_A 259 DKIRSLG--WRVMVVGCHGDPMIDR--QMELAERLEKKG----VDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVD 329 (338)
T ss_dssp HHHHHHT--CEEEEEEETTSTTHHH--HHHHHHHHHHTT----CEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-
T ss_pred hhhcCCC--CCEEEEECCCCcchHH--HHHHHHHHHHCC----CcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHh
Confidence 1122222 6999999999988763 233444443322 13899999999999988777 8999999999964
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-22 Score=161.01 Aligned_cols=106 Identities=11% Similarity=0.174 Sum_probs=86.6
Q ss_pred CCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
..+||||+||++++. ..|..+.+.|.+.+ .|++|+++|+ |||.|...... ...++.+.++++.+.++..
T Consensus 4 ~~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~------~g~~v~~~d~-G~g~s~~~~~~-~~~~~~~~~~~~~~~l~~~ 75 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLSMGAIKKMVEKKI------PGIHVLSLEI-GKTLREDVENS-FFLNVNSQVTTVCQILAKD 75 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTTTHHHHHHHHHHS------TTCCEEECCC-SSSHHHHHHHH-HHSCHHHHHHHHHHHHHSC
T ss_pred CCCcEEEECCCCCCCCCcccHHHHHHHHHHHC------CCcEEEEEEe-CCCCccccccc-cccCHHHHHHHHHHHHHhh
Confidence 356899999999988 79999999999754 5889999998 99987532110 1247788888888888753
Q ss_pred C-C-CCCEEEEEeChhHHHHHHHHHHccccccCCccCC-cceEEEEecC
Q 020518 120 G-W-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL-PKQLWVLDSV 165 (325)
Q Consensus 120 ~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~-v~~lvli~~~ 165 (325)
. . + ++++|||||||.++..++.++|+ + |+++|+++++
T Consensus 76 ~~l~~-~~~lvGhSmGG~ia~~~a~~~~~--------~~v~~lv~~~~p 115 (279)
T 1ei9_A 76 PKLQQ-GYNAMGFSQGGQFLRAVAQRCPS--------PPMVNLISVGGQ 115 (279)
T ss_dssp GGGTT-CEEEEEETTHHHHHHHHHHHCCS--------SCEEEEEEESCC
T ss_pred hhccC-CEEEEEECHHHHHHHHHHHHcCC--------cccceEEEecCc
Confidence 2 2 5 99999999999999999999997 5 9999999875
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=161.05 Aligned_cols=214 Identities=18% Similarity=0.153 Sum_probs=135.4
Q ss_pred eEEEecC--CCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 46 TAFVLHG--LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE--IEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 46 ~vv~~HG--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
+|+|+|| ++++...|..+...|. .+++|+++|+||+|.+.. ... ..++++++++++.+.++.+..
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~---------~~~~v~~~d~~G~g~~~~~~~~~--~~~~~~~~a~~~~~~i~~~~~ 159 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ---------EERDFLAVPLPGYGTGTGTGTAL--LPADLDTALDAQARAILRAAG 159 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT---------TTCCEEEECCTTCCBC---CBCC--EESSHHHHHHHHHHHHHHHHT
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC---------CCCceEEecCCCCCCCcccccCC--CCCCHHHHHHHHHHHHHHhcC
Confidence 9999998 6788889999888777 789999999999999721 011 468999999999999988743
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
.++++++||||||.+|+.+|.+.++.. ..+|++++++++.+.... .....++.. +...
T Consensus 160 ~~p~~l~G~S~GG~vA~~~A~~l~~~~----g~~v~~lvl~d~~~~~~~-----~~~~~~~~~-------------l~~~ 217 (319)
T 2hfk_A 160 DAPVVLLGHAGGALLAHELAFRLERAH----GAPPAGIVLVDPYPPGHQ-----EPIEVWSRQ-------------LGEG 217 (319)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHHHHHH----SCCCSEEEEESCCCTTSC-----HHHHHTHHH-------------HHHH
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHhh----CCCceEEEEeCCCCCCch-----hHHHHHHHH-------------hhHH
Confidence 339999999999999999999885400 016999999998643221 001111100 0000
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH-HHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV-IQRLE 280 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~ 280 (325)
++..... .. ..........+...+... ....+ ++|+++++| +|..+++.. ...
T Consensus 218 ------------~~~~~~~-~~----~~~~~~~~~~~~~~~~~~----~~~~i--~~Pvl~i~g-~D~~~~~~~~~~~-- 271 (319)
T 2hfk_A 218 ------------LFAGELE-PM----SDARLLAMGRYARFLAGP----RPGRS--SAPVLLVRA-SEPLGDWQEERGD-- 271 (319)
T ss_dssp ------------HHHTCSS-CC----CHHHHHHHHHHHHHHHSC----CCCCC--CSCEEEEEE-SSCSSCCCGGGCC--
T ss_pred ------------HHHhhcc-cc----chHHHHHHHHHHHHHHhC----CCCCc--CCCEEEEEc-CCCCCCccccccc--
Confidence 0100000 00 000001111111100110 11333 489999999 888877643 222
Q ss_pred HHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
+....+ ++++++.++ +||+.++ ++|+++++.|.+||+.
T Consensus 272 -~~~~~~----~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~ 310 (319)
T 2hfk_A 272 -WRAHWD----LPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDA 310 (319)
T ss_dssp -CSCCCS----SCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHH
T ss_pred -hhhcCC----CCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHh
Confidence 222211 237999999 5999765 8999999999999964
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-20 Score=156.35 Aligned_cols=224 Identities=14% Similarity=0.090 Sum_probs=131.2
Q ss_pred CCCceEEEecCCCC---CCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLG---SGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
...|+||++||.+. +... |..++..|++. .||.|+++|+||.+.+.. ...+++..+.+..+.
T Consensus 111 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~-------~g~~vv~~d~rg~~~~~~------~~~~~D~~~~~~~l~ 177 (351)
T 2zsh_A 111 DIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGL-------CKCVVVSVNYRRAPENPY------PCAYDDGWIALNWVN 177 (351)
T ss_dssp SSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH-------HTSEEEEECCCCTTTSCT------THHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCcCcCCCCcchhHHHHHHHHHHH-------cCCEEEEecCCCCCCCCC------chhHHHHHHHHHHHH
Confidence 35688999999654 3333 78888888832 689999999999776532 223444444444444
Q ss_pred HHh----CC-CC-CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC
Q 020518 117 KAK----GW-DW-PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS 190 (325)
Q Consensus 117 ~~~----~~-~~-~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (325)
+.. +. .. +++|+||||||.+|+.+|.++|+. ..+++++|++++....... ... ... .. ..
T Consensus 178 ~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~-----~~~v~~~vl~~p~~~~~~~--~~~----~~~-~~--~~ 243 (351)
T 2zsh_A 178 SRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES-----GIDVLGNILLNPMFGGNER--TES----EKS-LD--GK 243 (351)
T ss_dssp TCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT-----TCCCCEEEEESCCCCCSSC--CHH----HHH-HT--TT
T ss_pred hCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc-----CCCeeEEEEECCccCCCcC--Chh----hhh-cC--CC
Confidence 421 22 23 799999999999999999998851 1269999999876433211 100 000 00 00
Q ss_pred CCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC-cEEEEeeCCCC
Q 020518 191 SIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM-EIAIVRAEKSD 269 (325)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~ 269 (325)
....... ...+ ...+......... .. ...+. .....+..+. + |+++++|++|.
T Consensus 244 ~~~~~~~-~~~~--------~~~~~~~~~~~~~----~~---------~~~~~--~~~~~l~~i~--~pP~Lii~G~~D~ 297 (351)
T 2zsh_A 244 YFVTVRD-RDWY--------WKAFLPEGEDREH----PA---------CNPFS--PRGKSLEGVS--FPKSLVVVAGLDL 297 (351)
T ss_dssp SSCCHHH-HHHH--------HHHHSCTTCCTTS----TT---------TCTTS--TTSCCCTTCC--CCEEEEEEETTST
T ss_pred cccCHHH-HHHH--------HHHhCCCCCCCCC----cc---------cCCCC--CCccchhhCC--CCCEEEEEcCCCc
Confidence 0001100 0000 0001000000000 00 00000 0112233332 4 99999999998
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc----cChHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~ 324 (325)
.++ ....+.+.+...+. ++++++++++||.++. ++++++.+.|.+||++
T Consensus 298 ~~~--~~~~~~~~l~~~g~----~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 298 IRD--WQLAYAEGLKKAGQ----EVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp THH--HHHHHHHHHHHTTC----CEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred chH--HHHHHHHHHHHcCC----CEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 765 23445555543332 3999999999999887 8899999999999975
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-20 Score=154.08 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=134.8
Q ss_pred CCce-EEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 43 YTST-AFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 43 ~~~~-vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
.+++ ||++||.+ ++...|..++..|++. .||.|+++|+|+++.+.. ...+++..+.+..+++.
T Consensus 78 ~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~-------~g~~v~~~dyr~~~~~~~------~~~~~d~~~a~~~l~~~ 144 (322)
T 3k6k_A 78 AGAAHILYFHGGGYISGSPSTHLVLTTQLAKQ-------SSATLWSLDYRLAPENPF------PAAVDDCVAAYRALLKT 144 (322)
T ss_dssp CCSCEEEEECCSTTTSCCHHHHHHHHHHHHHH-------HTCEEEEECCCCTTTSCT------THHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCcccCCChHHHHHHHHHHHHh-------cCCEEEEeeCCCCCCCCC------chHHHHHHHHHHHHHHc
Confidence 3566 99999976 6667788888888752 389999999999876543 33456666666666666
Q ss_pred -hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHH
Q 020518 119 -KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKW 197 (325)
Q Consensus 119 -~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (325)
++.+ +++|+|||+||.+|+.+|.++|+... ..++++|++++........ ......... ........
T Consensus 145 ~~~~~-~i~l~G~S~GG~la~~~a~~~~~~~~----~~~~~~vl~~p~~~~~~~~------~~~~~~~~~--~~~~~~~~ 211 (322)
T 3k6k_A 145 AGSAD-RIIIAGDSAGGGLTTASMLKAKEDGL----PMPAGLVMLSPFVDLTLSR------WSNSNLADR--DFLAEPDT 211 (322)
T ss_dssp HSSGG-GEEEEEETHHHHHHHHHHHHHHHTTC----CCCSEEEEESCCCCTTCCS------HHHHHTGGG--CSSSCHHH
T ss_pred CCCCc-cEEEEecCccHHHHHHHHHHHHhcCC----CCceEEEEecCCcCcccCc------cchhhccCC--CCcCCHHH
Confidence 5566 99999999999999999999987110 1399999999875432211 000000000 00000000
Q ss_pred HHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 198 LVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
. .. ....+... ...... .............|+++++|++|..+ ....
T Consensus 212 ~-~~--------~~~~~~~~-----~~~~~~-----------------~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~ 258 (322)
T 3k6k_A 212 L-GE--------MSELYVGG-----EDRKNP-----------------LISPVYADLSGLPEMLIHVGSEEALL--SDST 258 (322)
T ss_dssp H-HH--------HHHHHHTT-----SCTTCT-----------------TTCGGGSCCTTCCCEEEEEESSCTTH--HHHH
T ss_pred H-HH--------HHHHhcCC-----CCCCCC-----------------cCCcccccccCCCcEEEEECCcCccH--HHHH
Confidence 0 00 00011100 000000 00000111122259999999999873 4556
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccc-----cChHHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~ 324 (325)
.+.+.+...+. +++++++++++|.++. +.++++.+.|.+||++
T Consensus 259 ~~~~~l~~~g~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3k6k_A 259 TLAERAGAAGV----SVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISA 306 (322)
T ss_dssp HHHHHHHHTTC----CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCC----CEEEEEECCCccccccccccChHHHHHHHHHHHHHHH
Confidence 66666665433 3899999999998764 4478999999999975
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=159.13 Aligned_cols=97 Identities=20% Similarity=0.249 Sum_probs=83.2
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
++++|||+||++++...|..+++.|. ++|+++|+++. + ..++++++++++.+.++.+...
T Consensus 23 ~~~~l~~~hg~~~~~~~~~~~~~~L~-----------~~v~~~d~~~~-----~----~~~~~~~~a~~~~~~i~~~~~~ 82 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVFHSLASRLS-----------IPTYGLQCTRA-----A----PLDSIHSLAAYYIDCIRQVQPE 82 (283)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS-----------SCEEEECCCTT-----S----CCSCHHHHHHHHHHHHTTTCCS
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC-----------ceEEEEecCCC-----C----CCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999877654 49999999641 1 4679999999999999998763
Q ss_pred CCEEEEEeChhHHHHHHHHHHc---cccccCCccCCcc---eEEEEecCCC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSC---ARADYGQFVALPK---QLWVLDSVPG 167 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~---p~~~~~~~~~~v~---~lvli~~~~~ 167 (325)
++++|+||||||.+|+.+|.+. |+ +|. +++++++.+.
T Consensus 83 ~~~~l~GhS~Gg~va~~~a~~~~~~~~--------~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 83 GPYRVAGYSYGACVAFEMCSQLQAQQS--------PAPTHNSLFLFDGSPT 125 (283)
T ss_dssp SCCEEEEETHHHHHHHHHHHHHHHHHT--------TSCCCCEEEEESCCTT
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCC--------CCCccceEEEEcCCch
Confidence 3999999999999999999976 77 888 9999998753
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-21 Score=155.55 Aligned_cols=208 Identities=17% Similarity=0.187 Sum_probs=131.4
Q ss_pred cccceEEEEcccCC--CCCCCceEEEecCCCCCCCChHHH---HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-
Q 020518 26 SLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGRNWRSF---SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL- 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~- 99 (325)
.+..+.+..+-+.. .....|+||++||++++...|... ...+.+ .|+.|+++|.+++|.+......
T Consensus 27 ~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~--------~g~~vv~pd~~~~g~~~~~~~~~ 98 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAE--------LGIAIVAPDTSPRGEGVADDEGY 98 (280)
T ss_dssp TTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHH--------HTCEEEEECSSCCSTTCCCCSST
T ss_pred cCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhh--------CCeEEEEeCCcccccccCccccc
Confidence 46778887776643 134578999999999999888774 333443 6899999999988765432210
Q ss_pred -------------C----CCCC-HHHHHHHHHHHHHHh-CC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceE
Q 020518 100 -------------D----PPHD-IANAANDLANLVKAK-GW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQL 159 (325)
Q Consensus 100 -------------~----~~~~-~~~~~~~l~~~l~~~-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l 159 (325)
. ..+. .+.+++++..++++. .. + +++|+||||||.+|+.+|.++|+ +++++
T Consensus 99 ~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~ 169 (280)
T 3i6y_A 99 DLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSD-KRAIAGHSMGGHGALTIALRNPE--------RYQSV 169 (280)
T ss_dssp TSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEE-EEEEEEETHHHHHHHHHHHHCTT--------TCSCE
T ss_pred ccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCC-CeEEEEECHHHHHHHHHHHhCCc--------cccEE
Confidence 0 0012 344567888888554 44 5 89999999999999999999999 99999
Q ss_pred EEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhh
Q 020518 160 WVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMF 239 (325)
Q Consensus 160 vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (325)
+++++........ .... . +..++... ...+.
T Consensus 170 v~~s~~~~~~~~~----~~~~-----------------~------------~~~~~~~~------~~~~~---------- 200 (280)
T 3i6y_A 170 SAFSPINNPVNCP----WGQK-----------------A------------FTAYLGKD------TDTWR---------- 200 (280)
T ss_dssp EEESCCCCGGGSH----HHHH-----------------H------------HHHHHCSC------GGGTG----------
T ss_pred EEeCCccccccCc----hHHH-----------------H------------HHHhcCCc------hHHHH----------
Confidence 9999864321100 0000 0 00011100 00000
Q ss_pred hcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCcccc
Q 020518 240 NSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH 307 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 307 (325)
..+....+..++..+|+++++|++|..++.+. .+.+.+.+...+. +++++++++++|...
T Consensus 201 ----~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~ 261 (280)
T 3i6y_A 201 ----EYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNY----PLELRSHEGYDHSYY 261 (280)
T ss_dssp ----GGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTC----CEEEEEETTCCSSHH
T ss_pred ----hcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCC----CceEEEeCCCCccHH
Confidence 00000111111113799999999999887643 5566666665443 389999999999764
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=174.69 Aligned_cols=223 Identities=13% Similarity=0.121 Sum_probs=145.3
Q ss_pred cccceEEEEcccCC--CCCCCceEEEecCCCCCC---CChH--HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC---
Q 020518 26 SLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSG---RNWR--SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE--- 95 (325)
Q Consensus 26 ~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~---~~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~--- 95 (325)
+| ++.+..+.+.. .....|+||++||++++. ..|. .....|++ .||.|+++|+||+|.+..
T Consensus 477 ~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~--------~G~~vv~~d~rG~g~~g~~~~ 547 (723)
T 1xfd_A 477 DY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS--------HGAVVVKCDGRGSGFQGTKLL 547 (723)
T ss_dssp TE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT--------TCCEEECCCCTTCSSSHHHHH
T ss_pred Cc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhc--------CCEEEEEECCCCCccccHHHH
Confidence 55 77777776643 234468899999998863 3343 45555665 799999999999998521
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHH--hCCCCCEEEEEeChhHHHHHHHHHHc----cccccCCccCCcceEEEEecCC
Q 020518 96 ---IEGLDPPHDIANAANDLANLVKA--KGWDWPDVVIGHSMGGKVALHFAQSC----ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 96 ---~~~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.... ....++++++.+..+.+. ++.+ +++|+||||||.+++.++.++ |+ +++++|++++..
T Consensus 548 ~~~~~~~-~~~~~~d~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~~~~~p~--------~~~~~v~~~~~~ 617 (723)
T 1xfd_A 548 HEVRRRL-GLLEEKDQMEAVRTMLKEQYIDRT-RVAVFGKDYGGYLSTYILPAKGENQGQ--------TFTCGSALSPIT 617 (723)
T ss_dssp HTTTTCT-TTHHHHHHHHHHHHHHSSSSEEEE-EEEEEEETHHHHHHHHCCCCSSSTTCC--------CCSEEEEESCCC
T ss_pred HHHHhcc-CcccHHHHHHHHHHHHhCCCcChh-hEEEEEECHHHHHHHHHHHhccccCCC--------eEEEEEEccCCc
Confidence 1100 123445555555444333 1345 899999999999999999999 98 999999998764
Q ss_pred CCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCc
Q 020518 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMS 246 (325)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (325)
..... . ...... ++.... .... .+....
T Consensus 618 ~~~~~----------------------~-~~~~~~------------~~~~~~--~~~~---------------~~~~~~ 645 (723)
T 1xfd_A 618 DFKLY----------------------A-SAFSER------------YLGLHG--LDNR---------------AYEMTK 645 (723)
T ss_dssp CTTSS----------------------B-HHHHHH------------HHCCCS--SCCS---------------STTTTC
T ss_pred chHHh----------------------h-hhccHh------------hcCCcc--CChh---------------HHHhcC
Confidence 32210 0 000000 000000 0000 000111
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc-cccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV-HVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 324 (325)
....+..++ .+|+|+++|++|..++++..+.+.+.+...+. ++++++++++||.+ ..++++++.+.+.+||++
T Consensus 646 ~~~~~~~~~-~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 719 (723)
T 1xfd_A 646 VAHRVSALE-EQQFLIIHPTADEKIHFQHTAELITQLIRGKA----NYSLQIYPDESHYFTSSSLKQHLYRSIINFFVE 719 (723)
T ss_dssp THHHHTSCC-SCEEEEEEETTCSSSCHHHHHHHHHHHHHTTC----CCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTT
T ss_pred hhhHHhhcC-CCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCC----CeEEEEECCCCcccccCcchHHHHHHHHHHHHH
Confidence 111223332 15999999999999999888888887765432 38999999999998 678899999999999975
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-21 Score=160.74 Aligned_cols=101 Identities=12% Similarity=0.062 Sum_probs=85.4
Q ss_pred CCceEEEecCCCCCCCC-hH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 43 YTSTAFVLHGLLGSGRN-WR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~-~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
.+++|||+||++++... |. .+.+.|.+ .||+|+++|+||||.+.. ..+.+++++.+..+++..+
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~--------~G~~v~~~d~~g~g~~~~------~~~~~~l~~~i~~~~~~~g 95 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQ--------LGYTPCWISPPPFMLNDT------QVNTEYMVNAITALYAGSG 95 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHT--------TTCEEEEECCTTTTCSCH------HHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHh--------CCCEEEEECCCCCCCCcH------HHHHHHHHHHHHHHHHHhC
Confidence 46789999999999886 88 88888886 799999999999987642 2345667777777777878
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHcc---ccccCCccCCcceEEEEecCC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCA---RADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p---~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+ +++||||||||.+++.++.++| + +|+++|+++++.
T Consensus 96 ~~-~v~lVGhS~GG~va~~~~~~~~~~~~--------~v~~lV~l~~~~ 135 (317)
T 1tca_A 96 NN-KLPVLTWSQGGLVAQWGLTFFPSIRS--------KVDRLMAFAPDY 135 (317)
T ss_dssp SC-CEEEEEETHHHHHHHHHHHHCGGGTT--------TEEEEEEESCCT
T ss_pred CC-CEEEEEEChhhHHHHHHHHHcCccch--------hhhEEEEECCCC
Confidence 78 9999999999999999998876 5 899999999764
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-20 Score=147.40 Aligned_cols=209 Identities=13% Similarity=0.135 Sum_probs=129.1
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC---------------------CCCCCCCCC---C
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR---------------------NHGRSAEIE---G 98 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~---------------------G~G~S~~~~---~ 98 (325)
.+|+|||+||++++...|......+.+.+.+ .||+|+++|+| |+|.+..-. .
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~----~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~ 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKK----ANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSE 79 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHH----TTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCS
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhh----cceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCC
Confidence 4689999999999999887544344433321 58999999999 445432100 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 99 LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 99 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
.....++.+.++.+.+.++..+ + +++|+||||||.+|+.+|.+++.... ....++.++++++....... .
T Consensus 80 ~~~~~d~~~~~~~l~~~~~~~~-~-~i~l~G~S~Gg~~a~~~a~~~~~~~~--~~~~~~~~v~~~g~~~~~~~-~----- 149 (243)
T 1ycd_A 80 ISHELDISEGLKSVVDHIKANG-P-YDGIVGLSQGAALSSIITNKISELVP--DHPQFKVSVVISGYSFTEPD-P----- 149 (243)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHC-C-CSEEEEETHHHHHHHHHHHHHHHHST--TCCCCSEEEEESCCCCEEEC-T-----
T ss_pred CcchhhHHHHHHHHHHHHHhcC-C-eeEEEEeChHHHHHHHHHHHHhhccc--CCCCceEEEEecCCCCCCcc-c-----
Confidence 0012577888888888887665 5 78999999999999999998753000 00146677776654311000 0
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
.. ... . .+ ... ... ....+..+ ++
T Consensus 150 --------~~-------------------~~~--------~-------~~--~~~----~~~------~~~~~~~~--~~ 173 (243)
T 1ycd_A 150 --------EH-------------------PGE--------L-------RI--TEK----FRD------SFAVKPDM--KT 173 (243)
T ss_dssp --------TS-------------------TTC--------E-------EE--CGG----GTT------TTCCCTTC--CC
T ss_pred --------cc-------------------ccc--------c-------cc--chh----HHH------hccCcccC--CC
Confidence 00 000 0 00 000 000 00112223 48
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+++|+|++|..++++..+.+.+.++..+... ......+++++||++..+ +.+.+.|.+||++
T Consensus 174 P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~ 236 (243)
T 1ycd_A 174 KMIFIYGASDQAVPSVRSKYLYDIYLKAQNGN-KEKVLAYEHPGGHMVPNK--KDIIRPIVEQITS 236 (243)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHHHHHTTTC-TTTEEEEEESSSSSCCCC--HHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCccCHHHHHHHHHHhhhhcccc-ccccEEEecCCCCcCCch--HHHHHHHHHHHHH
Confidence 99999999999999998888888776520000 001455677789998765 4689999999864
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=150.35 Aligned_cols=211 Identities=15% Similarity=0.128 Sum_probs=126.6
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
++++|+|+||++++...|..+...|. . ++|+++|+||+|. .++++.++++.+...
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~---------~-~~v~~~d~~g~~~---------------~~~~~~~~i~~~~~~ 70 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLP---------S-YKLCAFDFIEEED---------------RLDRYADLIQKLQPE 70 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCT---------T-EEEEEECCCCSTT---------------HHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcC---------C-CeEEEecCCCHHH---------------HHHHHHHHHHHhCCC
Confidence 36899999999999999999988776 6 8999999998763 355777777877764
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
++++++||||||.+|+.+|.+.++ ...+++++|++++.............. ..........
T Consensus 71 ~~~~l~G~S~Gg~ia~~~a~~~~~-----~~~~v~~lvl~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~- 131 (230)
T 1jmk_C 71 GPLTLFGYSAGCSLAFEAAKKLEG-----QGRIVQRIIMVDSYKKQGVSDLDGRTV-------------ESDVEALMNV- 131 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHH-----TTCCEEEEEEESCCEECCCC---------------------CCHHHHHHH-
T ss_pred CCeEEEEECHhHHHHHHHHHHHHH-----cCCCccEEEEECCCCCCcccccccccH-------------HHHHHHHHhc-
Confidence 489999999999999999998763 011799999999764321110000000 0000000000
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
...........+... .......+..+... ......+ ++|+++++|++|..++.. ...+.+.
T Consensus 132 -~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~--~~P~l~i~g~~D~~~~~~-~~~w~~~ 192 (230)
T 1jmk_C 132 -NRDNEALNSEAVKHG-------------LKQKTHAFYSYYVN--LISTGQV--KADIDLLTSGADFDIPEW-LASWEEA 192 (230)
T ss_dssp -TTTCSGGGSHHHHHH-------------HHHHHHHHHHHHHH--CCCCSCB--SSEEEEEECSSCCCCCTT-EECSGGG
T ss_pred -ChhhhhhhhHHHHHH-------------HHHHHHHHHHHhhh--ccccccc--cccEEEEEeCCCCCCccc-cchHHHh
Confidence 000000000000000 00000011111000 0112233 489999999999887632 2222222
Q ss_pred hhhcCCCCCCceeEEEecCCCc--cccccChHHHHHHHHHHHhc
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGH--WVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH--~~~~e~p~~~~~~i~~fl~~ 324 (325)
. . ++++++.+++ || +++.++++.+++.|.+||..
T Consensus 193 ~---~----~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 193 T---T----GAYRMKRGFG-THAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp B---S----SCEEEEECSS-CGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred c---C----CCeEEEEecC-ChHHHcCcHhHHHHHHHHHHHHhh
Confidence 1 1 1389999997 99 88888999999999999864
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-20 Score=170.33 Aligned_cols=224 Identities=14% Similarity=0.014 Sum_probs=143.7
Q ss_pred cceEEEEcccCC--CCCCCceEEEecCCCCCCC---ChH-HHHHHHH-hhhhccCCCCceEEEEeCCCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGR---NWR-SFSRNLA-STLSQTSASSEWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 28 ~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~---~~~-~~~~~l~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
..+.+..+.+.. .....|+||++||++++.. .|. .+...|. + .||.|+++|+||+|.+.......
T Consensus 478 ~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~--------~G~~v~~~d~rG~g~~~~~~~~~ 549 (719)
T 1z68_A 478 ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASK--------EGMVIALVDGRGTAFQGDKLLYA 549 (719)
T ss_dssp EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHT--------TCCEEEEEECTTBSSSCHHHHGG
T ss_pred eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhc--------CCeEEEEEcCCCCCCCchhhHHH
Confidence 678887776643 2234678999999988653 443 3444453 4 79999999999999986431000
Q ss_pred -CCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 101 -PPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 101 -~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
...--....+|+.+.++.+ +.+ +++++||||||.+++.++.++|+ +++++|++++.......
T Consensus 550 ~~~~~~~~~~~d~~~~~~~l~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~~~~~~~~~-- 618 (719)
T 1z68_A 550 VYRKLGVYEVEDQITAVRKFIEMGFIDEK-RIAIWGWSYGGYVSSLALASGTG--------LFKCGIAVAPVSSWEYY-- 618 (719)
T ss_dssp GTTCTTHHHHHHHHHHHHHHHTTSCEEEE-EEEEEEETHHHHHHHHHHTTSSS--------CCSEEEEESCCCCTTTS--
T ss_pred HhhccCcccHHHHHHHHHHHHhcCCCCCc-eEEEEEECHHHHHHHHHHHhCCC--------ceEEEEEcCCccChHHh--
Confidence 0000122344444444333 235 89999999999999999999999 99999999886532211
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
. .. ....+..... ... ....+ . ..+....+..
T Consensus 619 -~---~~-----------------~~~~~~g~~~-------------~~~-------~~~~~----~---~~~~~~~~~~ 650 (719)
T 1z68_A 619 -A---SV-----------------YTERFMGLPT-------------KDD-------NLEHY----K---NSTVMARAEY 650 (719)
T ss_dssp -B---HH-----------------HHHHHHCCSS-------------TTT-------THHHH----H---HTCSGGGGGG
T ss_pred -c---cc-----------------cchhhcCCcc-------------ccc-------chhhh----h---hCCHhHHHhc
Confidence 0 00 0000000000 000 00000 0 0111122333
Q ss_pred CCCCC-cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 254 PPQGM-EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++ + |+++++|++|..++++..+.+.+.++..+. ++++++++++||.+..++++++.+.|.+||++
T Consensus 651 ~~--~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 716 (719)
T 1z68_A 651 FR--NVDYLLIHGTADDNVHFQNSAQIAKALVNAQV----DFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQ 716 (719)
T ss_dssp GT--TSEEEEEEETTCSSSCTHHHHHHHHHHHHTTC----CCEEEEETTCCTTCCTHHHHHHHHHHHHHHHH
T ss_pred CC--CCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCC----ceEEEEECcCCCCCCcccHHHHHHHHHHHHHH
Confidence 33 4 899999999999999888888887776443 27899999999999777899999999999974
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-19 Score=150.42 Aligned_cols=232 Identities=16% Similarity=0.124 Sum_probs=138.2
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
..+..+.+.+.. ....|+||++||.+ ++...|..++..|+.. .||.|+++|+|+.+.... ...
T Consensus 65 ~~i~~~~~~p~~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~-------~g~~vv~~dyr~~p~~~~------~~~ 130 (322)
T 3fak_A 65 AGCAAEWVRAPG-CQAGKAILYLHGGGYVMGSINTHRSMVGEISRA-------SQAAALLLDYRLAPEHPF------PAA 130 (322)
T ss_dssp TTEEEEEEECTT-CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHH-------HTSEEEEECCCCTTTSCT------THH
T ss_pred CCeEEEEEeCCC-CCCccEEEEEcCCccccCChHHHHHHHHHHHHh-------cCCEEEEEeCCCCCCCCC------CcH
Confidence 345555555432 24578999999976 4556677778888753 489999999998765432 334
Q ss_pred HHHHHHHHHHHHHH-hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 105 IANAANDLANLVKA-KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 105 ~~~~~~~l~~~l~~-~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++..+.+..+.+. ++.+ +++|+|||+||.+|+.++.+.++... ..++++|++++.......... ...
T Consensus 131 ~~D~~~a~~~l~~~~~d~~-ri~l~G~S~GG~lA~~~a~~~~~~~~----~~~~~~vl~~p~~~~~~~~~~------~~~ 199 (322)
T 3fak_A 131 VEDGVAAYRWLLDQGFKPQ-HLSISGDSAGGGLVLAVLVSARDQGL----PMPASAIPISPWADMTCTNDS------FKT 199 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGG-GEEEEEETHHHHHHHHHHHHHHHTTC----CCCSEEEEESCCCCTTCCCTH------HHH
T ss_pred HHHHHHHHHHHHHcCCCCc-eEEEEEcCcCHHHHHHHHHHHHhcCC----CCceEEEEECCEecCcCCCcC------HHH
Confidence 56666666666665 4456 89999999999999999999887111 139999999987543321110 000
Q ss_pred HhhcCCC-CCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 184 TLQSLPS-SIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 184 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
....... .......+.. .++... ....... ......+..+ .|+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~------------~~~~~~-----~~~~~~~--------------sp~~~~~~~~---pP~li 245 (322)
T 3fak_A 200 RAEADPMVAPGGINKMAA------------RYLNGA-----DAKHPYA--------------SPNFANLKGL---PPLLI 245 (322)
T ss_dssp TTTTCCSCCSSHHHHHHH------------HHHTTS-----CTTCTTT--------------CGGGSCCTTC---CCEEE
T ss_pred hCccCcccCHHHHHHHHH------------HhcCCC-----CCCCccc--------------CCCcccccCC---ChHhE
Confidence 0000000 0000000000 011000 0000000 0001112222 38999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-----cChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~ 324 (325)
++|+.|..+ .....+.+.+...+. +++++++++++|.++. +..+++.+.+.+||++
T Consensus 246 ~~g~~D~~~--~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 306 (322)
T 3fak_A 246 HVGRDEVLL--DDSIKLDAKAKADGV----KSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMRE 306 (322)
T ss_dssp EEETTSTTH--HHHHHHHHHHHHTTC----CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred EEcCcCccH--HHHHHHHHHHHHcCC----CEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHH
Confidence 999999774 345566666665443 3899999999998764 3468889999999864
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=151.59 Aligned_cols=236 Identities=14% Similarity=0.025 Sum_probs=137.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+| .+..+.+.+.. ..+|+||++||.+ ++...|..++..|++. .||.|+++|+|+.+....+
T Consensus 72 ~g-~i~~~~~~p~~--~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~-------~g~~V~~~dyr~~p~~~~~------ 135 (326)
T 3ga7_A 72 YG-DVTTRLYSPQP--TSQATLYYLHGGGFILGNLDTHDRIMRLLARY-------TGCTVIGIDYSLSPQARYP------ 135 (326)
T ss_dssp TS-CEEEEEEESSS--SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHH-------HCSEEEEECCCCTTTSCTT------
T ss_pred CC-CeEEEEEeCCC--CCCcEEEEECCCCcccCChhhhHHHHHHHHHH-------cCCEEEEeeCCCCCCCCCC------
Confidence 44 67777776643 2358999999998 8889999999999853 4999999999987654322
Q ss_pred CCHHHHHHHHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 HDIANAANDLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
..+++..+.+..+.+. ++ .+ +++|+|||+||.+|+.++.++++... ....+++++++.+....... .
T Consensus 136 ~~~~D~~~a~~~l~~~~~~~~~d~~-ri~l~G~S~GG~la~~~a~~~~~~~~--~~~~~~~~vl~~~~~~~~~~---~-- 207 (326)
T 3ga7_A 136 QAIEETVAVCSYFSQHADEYSLNVE-KIGFAGDSAGAMLALASALWLRDKHI--RCGNVIAILLWYGLYGLQDS---V-- 207 (326)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTCCCS-EEEEEEETHHHHHHHHHHHHHHHHTC--CSSEEEEEEEESCCCSCSCC---H--
T ss_pred cHHHHHHHHHHHHHHhHHHhCCChh-heEEEEeCHHHHHHHHHHHHHHhcCC--CccCceEEEEeccccccCCC---h--
Confidence 2233333333333332 23 35 89999999999999999999887100 00028888888875432211 0
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
. ...... ......... ...+............ + .+.. .....+.. ..
T Consensus 208 -~--~~~~~~-~~~~l~~~~-------------~~~~~~~~~~~~~~~~----~---------~~~~-~~~~~~~~--~~ 254 (326)
T 3ga7_A 208 -S--RRLFGG-AWDGLTRED-------------LDMYEKAYLRNDEDRE----S---------PWYC-LFNNDLTR--DV 254 (326)
T ss_dssp -H--HHHCCC-TTTTCCHHH-------------HHHHHHHHCSSGGGGG----C---------TTTS-GGGSCCSS--CC
T ss_pred -h--HhhhcC-CCCCCCHHH-------------HHHHHHHhCCCCCccC----C---------cccC-CCcchhhc--CC
Confidence 0 000000 000011100 0001111000000000 0 0000 00011111 22
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-----cChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~ 324 (325)
.|+++++|+.|..++ ....+.+.+...+. +++++++++++|.+.. +..+++.+.+.+||++
T Consensus 255 ~P~li~~G~~D~~~~--~~~~~~~~l~~~g~----~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 320 (326)
T 3ga7_A 255 PPCFIASAEFDPLID--DSRLLHQTLQAHQQ----PCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMA 320 (326)
T ss_dssp CCEEEEEETTCTTHH--HHHHHHHHHHHTTC----CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCcCcCHH--HHHHHHHHHHHCCC----cEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHH
Confidence 599999999999873 44555566655433 3899999999998854 3468899999999864
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-19 Score=143.09 Aligned_cols=224 Identities=13% Similarity=0.052 Sum_probs=140.1
Q ss_pred cccceEEEEcccCCC------CCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSD------RPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE 97 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~------~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 97 (325)
.+..+.+..+.+... ....|+||++||++++...|.. .+..+.+. .++.|+.+|.++++.+..+.
T Consensus 17 ~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~ 89 (263)
T 2uz0_A 17 LDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNSWLKRTNVERLLRG-------TNLIVVMPNTSNGWYTDTQY 89 (263)
T ss_dssp TTEEEEEEEEECC---------CCBCEEEEECCTTCCTTHHHHHSCHHHHTTT-------CCCEEEECCCTTSTTSBCTT
T ss_pred hCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHHHHhccCHHHHHhc-------CCeEEEEECCCCCccccCCC
Confidence 355677776665432 3457899999999999998887 45555532 68899999999888776543
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC
Q 020518 98 GLDPPHDIANAANDLANLVKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT 171 (325)
Q Consensus 98 ~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~ 171 (325)
.....+.+++++..++++.. .+ +++++|||+||.+|+.++. +|+ +++++|++++.......
T Consensus 90 ---~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~-~~~--------~~~~~v~~~~~~~~~~~ 156 (263)
T 2uz0_A 90 ---GFDYYTALAEELPQVLKRFFPNMTSKRE-KTFIAGLSMGGYGCFKLAL-TTN--------RFSHAASFSGALSFQNF 156 (263)
T ss_dssp ---SCBHHHHHHTHHHHHHHHHCTTBCCCGG-GEEEEEETHHHHHHHHHHH-HHC--------CCSEEEEESCCCCSSSC
T ss_pred ---cccHHHHHHHHHHHHHHHHhccccCCCC-ceEEEEEChHHHHHHHHHh-Ccc--------ccceEEEecCCcchhhc
Confidence 23346777889999998852 25 8999999999999999999 999 99999999987543321
Q ss_pred CCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 172 ENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
. .. .. ...... .. ..++... .. .. +...+....+
T Consensus 157 ~--~~--------~~----~~~~~~-~~------------~~~~~~~----~~-~~--------------~~~~~~~~~~ 190 (263)
T 2uz0_A 157 S--PE--------SQ----NLGSPA-YW------------RGVFGEI----RD-WT--------------TSPYSLESLA 190 (263)
T ss_dssp C--GG--------GT----TCSCHH-HH------------HHHHCCC----SC-TT--------------TSTTSHHHHG
T ss_pred c--cc--------cc----ccccch-hH------------HHHcCCh----hh-hc--------------cccCCHHHHH
Confidence 1 00 00 000000 00 1111100 00 00 0001111112
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+...+|+++++|++|..++ ..+.+.+.+...+. ++++++++| ||.... .++..+.+.+||.+
T Consensus 191 ~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~----~~~~~~~~g-~H~~~~--~~~~~~~~~~~l~~ 254 (263)
T 2uz0_A 191 KKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGF----DVTYSHSAG-THEWYY--WEKQLEVFLTTLPI 254 (263)
T ss_dssp GGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTC----EEEEEEESC-CSSHHH--HHHHHHHHHHHSSS
T ss_pred HhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCC----CeEEEECCC-CcCHHH--HHHHHHHHHHHHHh
Confidence 222222799999999998874 24556666655432 389999999 997642 23555677777753
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=148.75 Aligned_cols=200 Identities=10% Similarity=0.067 Sum_probs=125.3
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.+++|||+||++++...|..++..|. .+|+|+++|+||++ ++++++.+.++.+...
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~---------~~~~v~~~d~~g~~---------------~~~~~~~~~i~~~~~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLN---------HKAAVYGFHFIEED---------------SRIEQYVSRITEIQPE 76 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTT---------TTSEEEEECCCCST---------------THHHHHHHHHHHHCSS
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhC---------CCceEEEEcCCCHH---------------HHHHHHHHHHHHhCCC
Confidence 46799999999999999999998887 68999999999863 3567778888887633
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
.+++++||||||.+|+.+|.+.++ ...++.++|++++......... .. .... +...
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~-----~~~~v~~lvl~~~~~~~~~~~~-~~-~~~~---~~~~-------------- 132 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQ-----KGLEVSDFIIVDAYKKDQSITA-DT-ENDD---SAAY-------------- 132 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHH-----TTCCEEEEEEESCCCCCSCCCC-C-----------CC--------------
T ss_pred CCEEEEEECHhHHHHHHHHHHHHH-----cCCCccEEEEEcCCCCcccccc-cc-cHHH---HHHH--------------
Confidence 399999999999999999998742 0017999999997643210000 00 0000 0000
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC--CCCCCChHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE--KSDRWDPDVIQRLE 280 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~--~D~~~~~~~~~~~~ 280 (325)
........+... ......+... ......+ ++|+++|+|+ +|. +++....
T Consensus 133 ----~~~~~~~~~~~~-------------~~~~~~~~~~------~~~~~~i--~~Pvl~i~g~~~~D~-~~~~~~~--- 183 (244)
T 2cb9_A 133 ----LPEAVRETVMQK-------------KRCYQEYWAQ------LINEGRI--KSNIHFIEAGIQTET-SGAMVLQ--- 183 (244)
T ss_dssp ----SCHHHHHHHTHH-------------HHHHHHHHHH------CCCCSCB--SSEEEEEECSBCSCC-CHHHHTT---
T ss_pred ----hHHHHHHHHHHH-------------HHHHHHHHHh------hccCCCc--CCCEEEEEccCcccc-ccccchh---
Confidence 000000000000 0000011000 0112233 4899999999 776 3333222
Q ss_pred HHhhhcCCCCCCceeEEEecCCCc--cccccChHHHHHHHHHHHhc
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGH--WVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH--~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+..... ++++++.+++ || ++..++|+++++.|.+||..
T Consensus 184 ~w~~~~~----~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~ 224 (244)
T 2cb9_A 184 KWQDAAE----EGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDK 224 (244)
T ss_dssp SSGGGBS----SCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcC----CCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhc
Confidence 2222221 1389999997 99 77778899999999999975
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.7e-19 Score=142.98 Aligned_cols=238 Identities=10% Similarity=0.042 Sum_probs=133.3
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCC---CCCCCh-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNW-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+.++..+.++. +.. ..+|+||++||.+ ++...| ..+...+.+ .||+|+++|+|+.+.
T Consensus 11 ~~~~~~~~~y~--p~~--~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~--------~g~~Vi~vdYrlaPe------- 71 (274)
T 2qru_A 11 LANGATVTIYP--TTT--EPTNYVVYLHGGGMIYGTKSDLPEELKELFTS--------NGYTVLALDYLLAPN------- 71 (274)
T ss_dssp CTTSCEEEEEC--CSS--SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHT--------TTEEEEEECCCCTTT-------
T ss_pred ccCCeeEEEEc--CCC--CCCcEEEEEeCccccCCChhhchHHHHHHHHH--------CCCEEEEeCCCCCCC-------
Confidence 34566665543 321 3478999999988 455545 556666765 789999999997432
Q ss_pred CCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHH---ccccccCCccCCcceEEEEecCCCCCCC
Q 020518 100 DPPHDIANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQS---CARADYGQFVALPKQLWVLDSVPGKVKT 171 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~---~p~~~~~~~~~~v~~lvli~~~~~~~~~ 171 (325)
..+...++|+.+.++.+. .+ +++|+|+|+||.+|+.++.+ .+. ++++++++.+.......
T Consensus 72 ---~~~p~~~~D~~~al~~l~~~~~~~~-~i~l~G~SaGG~lA~~~a~~~~~~~~--------~~~~~vl~~~~~~~~~~ 139 (274)
T 2qru_A 72 ---TKIDHILRTLTETFQLLNEEIIQNQ-SFGLCGRSAGGYLMLQLTKQLQTLNL--------TPQFLVNFYGYTDLEFI 139 (274)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHTTTTC-CEEEEEETHHHHHHHHHHHHHHHTTC--------CCSCEEEESCCSCSGGG
T ss_pred ---CCCcHHHHHHHHHHHHHHhccccCC-cEEEEEECHHHHHHHHHHHHHhcCCC--------CceEEEEEccccccccc
Confidence 245566666666665443 67 99999999999999999983 455 89999988765431100
Q ss_pred CCchh-HH----HHHHHHhhc-CC--CCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc
Q 020518 172 ENSEG-EV----EKVLQTLQS-LP--SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 172 ~~~~~-~~----~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (325)
..... .. ......+.. .. ....... ........ ....|. ........ ....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~-~~~~~~~~---------------~~~~ 198 (274)
T 2qru_A 140 KEPRKLLKQAISAKEIAAIDQTKPVWDDPFLSR-YLLYHYSI----QQALLP-HFYGLPEN---------------GDWS 198 (274)
T ss_dssp GSCCCSCSSCCCSGGGTTSCCSSCCSCCTTCTT-HHHHHHHH----HTTCHH-HHHTCCTT---------------SCCG
T ss_pred CCchhhccccccHHHHhhhcccCCCCCCccccc-hhhhhhhh----hhcchh-hccCcccc---------------cccc
Confidence 00000 00 000000000 00 0000000 00000000 000000 00000000 0000
Q ss_pred CCccc-ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH----HHHHHH
Q 020518 244 EMSYW-PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK----GLLEIV 318 (325)
Q Consensus 244 ~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i 318 (325)
..... ..+..+ .|+++++|+.|..++....+.+.+.... ++++++++++|.++.+.+. ++.+.+
T Consensus 199 ~~~~~~~~l~~l---pP~li~~G~~D~~~~~~~~~~l~~~~~~--------~~l~~~~g~~H~~~~~~~~~~~~~~~~~~ 267 (274)
T 2qru_A 199 AYALSDETLKTF---PPCFSTASSSDEEVPFRYSKKIGRTIPE--------STFKAVYYLEHDFLKQTKDPSVITLFEQL 267 (274)
T ss_dssp GGCCCHHHHHTS---CCEEEEEETTCSSSCTHHHHHHHHHSTT--------CEEEEECSCCSCGGGGTTSHHHHHHHHHH
T ss_pred cCCCChhhhcCC---CCEEEEEecCCCCcCHHHHHHHHHhCCC--------cEEEEcCCCCcCCccCcCCHHHHHHHHHH
Confidence 00000 122333 4999999999998888777777776665 8999999999998876543 557888
Q ss_pred HHHHhc
Q 020518 319 APRIAS 324 (325)
Q Consensus 319 ~~fl~~ 324 (325)
.+||+.
T Consensus 268 ~~fl~~ 273 (274)
T 2qru_A 268 DSWLKE 273 (274)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 899875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=166.48 Aligned_cols=228 Identities=14% Similarity=0.062 Sum_probs=145.6
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCC---CChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSG---RNWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~---~~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 98 (325)
.+|..+.+..+.+.. +....|+||++||.+++. ..|. .+...|+.. .||.|+++|+||+|.+.....
T Consensus 481 ~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~-------~G~~Vv~~D~rG~g~~g~~~~ 553 (740)
T 4a5s_A 481 LNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST-------ENIIVASFDGRGSGYQGDKIM 553 (740)
T ss_dssp ETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT-------TCCEEEEECCTTCSSSCHHHH
T ss_pred cCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhc-------CCeEEEEEcCCCCCcCChhHH
Confidence 477889988887754 234468899999998873 3333 233444421 799999999999997643210
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 99 -----LDPPHDIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 99 -----~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
......++++.+.+..+. +.+ .+ ++.|+||||||.+++.++.++|+ +++++|++++......
T Consensus 554 ~~~~~~~~~~~~~D~~~~i~~l~-~~~~~d~~-ri~i~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~p~~~~~~ 623 (740)
T 4a5s_A 554 HAINRRLGTFEVEDQIEAARQFS-KMGFVDNK-RIAIWGWSYGGYVTSMVLGSGSG--------VFKCGIAVAPVSRWEY 623 (740)
T ss_dssp GGGTTCTTSHHHHHHHHHHHHHH-TSTTEEEE-EEEEEEETHHHHHHHHHHTTTCS--------CCSEEEEESCCCCGGG
T ss_pred HHHHhhhCcccHHHHHHHHHHHH-hcCCcCCc-cEEEEEECHHHHHHHHHHHhCCC--------ceeEEEEcCCccchHH
Confidence 001123444444444433 222 25 89999999999999999999999 9999999987643210
Q ss_pred CCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
. . ....+.+........ ....+ . .......
T Consensus 624 ~----------------------~-~~~~~~~~~~p~~~~--------------------~~~~~----~---~~~~~~~ 653 (740)
T 4a5s_A 624 Y----------------------D-SVYTERYMGLPTPED--------------------NLDHY----R---NSTVMSR 653 (740)
T ss_dssp S----------------------B-HHHHHHHHCCSSTTT--------------------THHHH----H---HSCSGGG
T ss_pred h----------------------h-hHHHHHHcCCCCccc--------------------cHHHH----H---hCCHHHH
Confidence 0 0 000000000000000 00000 0 0111122
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc-cccChHHHHHHHHHHHhc
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV-HVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 324 (325)
+..++. .|+|+++|+.|+.++++....+.+.+...+. ++++++++++||.+ ..+.++.+.+.+.+||+.
T Consensus 654 ~~~i~~-~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~----~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 723 (740)
T 4a5s_A 654 AENFKQ-VEYLLIHGTADDNVHFQQSAQISKALVDVGV----DFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQ 723 (740)
T ss_dssp GGGGGG-SEEEEEEETTCSSSCTHHHHHHHHHHHHTTC----CCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HhcCCC-CcEEEEEcCCCCccCHHHHHHHHHHHHHCCC----CeEEEEECCCCCcCCCCccHHHHHHHHHHHHHH
Confidence 233321 2999999999999999888888887776443 38999999999998 667889999999999964
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-19 Score=143.22 Aligned_cols=197 Identities=15% Similarity=0.066 Sum_probs=118.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|.+|...-+.+.. ....|.||++||++++.. .+..+++.|++ .||.|+++|+||||.|.........
T Consensus 38 ~dG~~i~g~l~~P~~-~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~--------~Gy~Vl~~D~rG~G~s~~~~~~~~~ 108 (259)
T 4ao6_A 38 VDGRTVPGVYWSPAE-GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVG--------RGISAMAIDGPGHGERASVQAGREP 108 (259)
T ss_dssp ETTEEEEEEEEEESS-SCCSEEEEEEC--------CHHHHHHHHHHH--------TTEEEEEECCCC-------------
T ss_pred eCCeEEEEEEEeCCC-CCCCCEEEEeCCCcccccchHHHHHHHHHHH--------CCCeEEeeccCCCCCCCCccccccc
Confidence 378888877666533 234688999999998753 45677888887 9999999999999988654321000
Q ss_pred ----------------CCHHHHHHHHHHHHH----HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEE
Q 020518 103 ----------------HDIANAANDLANLVK----AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVL 162 (325)
Q Consensus 103 ----------------~~~~~~~~~l~~~l~----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli 162 (325)
......+.|....++ ..+.+ ++.++|+|+||.+++.++...|+ +++.|+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~-rv~~~G~S~GG~~a~~~a~~~pr---------i~Aav~~ 178 (259)
T 4ao6_A 109 TDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPR-PTGWWGLSMGTMMGLPVTASDKR---------IKVALLG 178 (259)
T ss_dssp CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCC-CEEEEECTHHHHHHHHHHHHCTT---------EEEEEEE
T ss_pred chhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCc-eEEEEeechhHHHHHHHHhcCCc---------eEEEEEe
Confidence 011222334434333 34667 99999999999999999999885 7776654
Q ss_pred ecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcc
Q 020518 163 DSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY 242 (325)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (325)
.+...... .. . .
T Consensus 179 ~~~~~~~~------------------------~~-------------~------------------------~------- 190 (259)
T 4ao6_A 179 LMGVEGVN------------------------GE-------------D------------------------L------- 190 (259)
T ss_dssp SCCTTSTT------------------------HH-------------H------------------------H-------
T ss_pred cccccccc------------------------cc-------------c------------------------h-------
Confidence 43221100 00 0 0
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.....+++ +|+|+++|++|..+|++....+.+.+.. ++.+++++++ +|... ..++..+.+.+||
T Consensus 191 -----~~~a~~i~--~P~Li~hG~~D~~vp~~~~~~l~~al~~------~~k~l~~~~G-~H~~~--p~~e~~~~~~~fl 254 (259)
T 4ao6_A 191 -----VRLAPQVT--CPVRYLLQWDDELVSLQSGLELFGKLGT------KQKTLHVNPG-KHSAV--PTWEMFAGTVDYL 254 (259)
T ss_dssp -----HHHGGGCC--SCEEEEEETTCSSSCHHHHHHHHHHCCC------SSEEEEEESS-CTTCC--CHHHHTHHHHHHH
T ss_pred -----hhhhccCC--CCEEEEecCCCCCCCHHHHHHHHHHhCC------CCeEEEEeCC-CCCCc--CHHHHHHHHHHHH
Confidence 00112233 7999999999999999988887776654 2368888887 77533 1245666777787
Q ss_pred hc
Q 020518 323 AS 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 255 ~~ 256 (259)
T 4ao6_A 255 DQ 256 (259)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=165.36 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=145.7
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC---C
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI---E 97 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~---~ 97 (325)
.+|.++.+..+.+.. .....|+||++||.++... .|......|.+ +||.|+++|+||+|.+... .
T Consensus 425 ~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~g~~g~~~~~~ 496 (695)
T 2bkl_A 425 KDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLD--------AGGVYAVANLRGGGEYGKAWHDA 496 (695)
T ss_dssp TTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHH--------TTCEEEEECCTTSSTTCHHHHHT
T ss_pred CCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHh--------CCCEEEEEecCCCCCcCHHHHHh
Confidence 467788888776543 2345789999999766554 56665556666 8999999999998876431 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC
Q 020518 98 GLDPPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT 171 (325)
Q Consensus 98 ~~~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~ 171 (325)
. .........+|+.+.++.+ +.+ ++.++|||+||.+++.++.++|+ +++++|+..+.......
T Consensus 497 ~--~~~~~~~~~~D~~~~~~~l~~~~~~~~~-~i~i~G~S~GG~la~~~~~~~p~--------~~~~~v~~~~~~d~~~~ 565 (695)
T 2bkl_A 497 G--RLDKKQNVFDDFHAAAEYLVQQKYTQPK-RLAIYGGSNGGLLVGAAMTQRPE--------LYGAVVCAVPLLDMVRY 565 (695)
T ss_dssp T--SGGGTHHHHHHHHHHHHHHHHTTSCCGG-GEEEEEETHHHHHHHHHHHHCGG--------GCSEEEEESCCCCTTTG
T ss_pred h--HhhcCCCcHHHHHHHHHHHHHcCCCCcc-cEEEEEECHHHHHHHHHHHhCCc--------ceEEEEEcCCccchhhc
Confidence 1 1122233445555554444 345 89999999999999999999999 99999999876533210
Q ss_pred CCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 172 ENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
. ... ....+ ...+ .. .. ..... ..+..+ .....+
T Consensus 566 ~--------------~~~---~~~~~-------------~~~~-g~----~~-------~~~~~-~~~~~~---sp~~~~ 599 (695)
T 2bkl_A 566 H--------------LFG---SGRTW-------------IPEY-GT----AE-------KPEDF-KTLHAY---SPYHHV 599 (695)
T ss_dssp G--------------GST---TGGGG-------------HHHH-CC----TT-------SHHHH-HHHHHH---CGGGCC
T ss_pred c--------------ccC---CCcch-------------HHHh-CC----CC-------CHHHH-HHHHhc---ChHhhh
Confidence 0 000 00000 0000 00 00 00000 011111 111222
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc--ccChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH--VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~e~p~~~~~~i~~fl~~ 324 (325)
..+....|+|+++|.+|..+++.....+.+.+..... ...++++++++++||... .+++.++.+.+.+||..
T Consensus 600 ~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 673 (695)
T 2bkl_A 600 RPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPG-NPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQ 673 (695)
T ss_dssp CSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTT-CCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhcc-CCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3333235999999999999999888888877765210 001389999999999973 35567788888899864
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-20 Score=152.60 Aligned_cols=232 Identities=14% Similarity=0.080 Sum_probs=137.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|..+..+.+.+.. ...|+||++||.+ ++...|..++..|+.. .||.|+++|+|+.+....+
T Consensus 69 ~G~~i~~~~~~P~~--~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~-------~g~~vv~~dyr~~p~~~~p------ 133 (317)
T 3qh4_A 69 AGRPVPVRIYRAAP--TPAPVVVYCHAGGFALGNLDTDHRQCLELARR-------ARCAVVSVDYRLAPEHPYP------ 133 (317)
T ss_dssp TSCEEEEEEEECSC--SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH-------HTSEEEEECCCCTTTSCTT------
T ss_pred CCCeEEEEEEecCC--CCCcEEEEECCCcCccCChHHHHHHHHHHHHH-------cCCEEEEecCCCCCCCCCc------
Confidence 46678877776643 4578999999887 6777888998888853 5899999999977654332
Q ss_pred CCHHHHHHHHHHHHH---HhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 HDIANAANDLANLVK---AKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~---~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
..+++..+.+..+.+ .+++ + +++|+|||+||.+|+.++.++++.. ...+.+++++.+..... . ..
T Consensus 134 ~~~~D~~~a~~~l~~~~~~~~~d~~-ri~l~G~S~GG~lA~~~a~~~~~~~----~~~~~~~vl~~p~~~~~-~--~~-- 203 (317)
T 3qh4_A 134 AALHDAIEVLTWVVGNATRLGFDAR-RLAVAGSSAGATLAAGLAHGAADGS----LPPVIFQLLHQPVLDDR-P--TA-- 203 (317)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEE-EEEEEEETHHHHHHHHHHHHHHHTS----SCCCCEEEEESCCCCSS-C--CH--
T ss_pred hHHHHHHHHHHHHHhhHHhhCCCcc-eEEEEEECHHHHHHHHHHHHHHhcC----CCCeeEEEEECceecCC-C--Cc--
Confidence 223333333333333 3443 4 8999999999999999999887721 11589999999875432 1 00
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
. ...... ........ .... ...++... . . .. +........+..+
T Consensus 204 --~-~~~~~~--~~~~~~~~-~~~~--------~~~~~~~~----~--~----~~---------~~~p~~~~~l~~l--- 247 (317)
T 3qh4_A 204 --S-RSEFRA--TPAFDGEA-ASLM--------WRHYLAGQ----T--P----SP---------ESVPGRRGQLAGL--- 247 (317)
T ss_dssp --H-HHHTTT--CSSSCHHH-HHHH--------HHHHHTTC----C--C----CT---------TTCGGGCSCCTTC---
T ss_pred --C-HHHhcC--CCCcCHHH-HHHH--------HHHhcCCC----C--C----Cc---------ccCCCcccccCCC---
Confidence 0 000000 00011100 0000 00111100 0 0 00 0000001112222
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-----ccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-----VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~e~p~~~~~~i~~fl~~ 324 (325)
.|+++++|+.|..++ ....+.+.+...+. +++++++++++|.+. .+.++++.+.+.+||++
T Consensus 248 pP~li~~G~~D~~~~--~~~~~a~~l~~~g~----~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~ 313 (317)
T 3qh4_A 248 PATLITCGEIDPFRD--EVLDYAQRLLGAGV----STELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALAD 313 (317)
T ss_dssp CCEEEEEEEESTTHH--HHHHHHHHHHHTTC----CEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHH
T ss_pred CceeEEecCcCCCch--hHHHHHHHHHHcCC----CEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHH
Confidence 399999999998765 22333444433322 389999999999843 45678999999999974
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=9.8e-20 Score=149.09 Aligned_cols=124 Identities=18% Similarity=0.190 Sum_probs=90.4
Q ss_pred cccceEEEEcccCCC--CCCCceEEEecCCCCCCCChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-
Q 020518 26 SLQTLAYEEVRSSSD--RPYTSTAFVLHGLLGSGRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL- 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~- 99 (325)
.+..+.+..+-+... ....|+||++||++++...|.. +...+.+ .|+.|+++|.+++|.+......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~--------~g~~vv~~d~~~~g~~~~~~~~~ 96 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAE--------LGIAIVAPDTSPRGDNVPNEDSY 96 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHH--------HTCEEEECCSSCCSTTSCCCSCT
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhh--------CCeEEEEeCCccccccccccccc
Confidence 466788887776542 3456899999999998888765 3444444 6899999999877765332100
Q ss_pred -----------------CCCCC-HHHHHHHHHHHHHHhC-C-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceE
Q 020518 100 -----------------DPPHD-IANAANDLANLVKAKG-W-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQL 159 (325)
Q Consensus 100 -----------------~~~~~-~~~~~~~l~~~l~~~~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l 159 (325)
..... .+.+.+++..++++.. . + +++|+||||||.+|+.++.++|+ +++++
T Consensus 97 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~G~S~GG~~a~~~a~~~p~--------~~~~~ 167 (280)
T 3ls2_A 97 DFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTS-TKAISGHSMGGHGALMIALKNPQ--------DYVSA 167 (280)
T ss_dssp TSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEE-EEEEEEBTHHHHHHHHHHHHSTT--------TCSCE
T ss_pred ccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCC-CeEEEEECHHHHHHHHHHHhCch--------hheEE
Confidence 00112 3445667777777652 2 5 89999999999999999999999 99999
Q ss_pred EEEecCC
Q 020518 160 WVLDSVP 166 (325)
Q Consensus 160 vli~~~~ 166 (325)
+++++..
T Consensus 168 ~~~s~~~ 174 (280)
T 3ls2_A 168 SAFSPIV 174 (280)
T ss_dssp EEESCCS
T ss_pred EEecCcc
Confidence 9999864
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-18 Score=160.67 Aligned_cols=232 Identities=14% Similarity=0.082 Sum_probs=138.7
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC---CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE---GL 99 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---~~ 99 (325)
.+|.++.+..+.+.......|+||++||.++... .|......|.+ +||.|+++|+||+|.+.... ..
T Consensus 469 ~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~g~~g~~~~~~~~ 540 (741)
T 1yr2_A 469 KDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWID--------SGGAFALANLRGGGEYGDAWHDAGR 540 (741)
T ss_dssp TTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHT--------TTCEEEEECCTTSSTTHHHHHHTTS
T ss_pred CCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHH--------CCcEEEEEecCCCCCCCHHHHHhhh
Confidence 4677888887766432345789999999887654 45666666776 89999999999999763211 00
Q ss_pred --CCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch
Q 020518 100 --DPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE 175 (325)
Q Consensus 100 --~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~ 175 (325)
.....++++++.+..++++- +.+ ++.++|||+||.+++.++.++|+ +++++|+..+........
T Consensus 541 ~~~~~~~~~D~~~~~~~l~~~~~~~~~-ri~i~G~S~GG~la~~~~~~~p~--------~~~~~v~~~~~~d~~~~~--- 608 (741)
T 1yr2_A 541 RDKKQNVFDDFIAAGEWLIANGVTPRH-GLAIEGGSNGGLLIGAVTNQRPD--------LFAAASPAVGVMDMLRFD--- 608 (741)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTSSCTT-CEEEEEETHHHHHHHHHHHHCGG--------GCSEEEEESCCCCTTSGG---
T ss_pred hhcCCCcHHHHHHHHHHHHHcCCCChH-HEEEEEECHHHHHHHHHHHhCch--------hheEEEecCCcccccccc---
Confidence 01123455555555555442 446 89999999999999999999999 999999988764332100
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
... ....+ ...+ .. .. ..... ..+..+ .....+.. .
T Consensus 609 -----------~~~---~~~~~-------------~~~~-g~----~~-------~~~~~-~~~~~~---sp~~~~~~-~ 644 (741)
T 1yr2_A 609 -----------QFT---AGRYW-------------VDDY-GY----PE-------KEADW-RVLRRY---SPYHNVRS-G 644 (741)
T ss_dssp -----------GST---TGGGG-------------HHHH-CC----TT-------SHHHH-HHHHTT---CGGGCCCT-T
T ss_pred -----------CCC---CCchh-------------HHHc-CC----CC-------CHHHH-HHHHHc---Cchhhhhc-c
Confidence 000 00000 0000 00 00 00000 011111 11112222 0
Q ss_pred CCC-cEEEEeeCCCCCCChHHHHHHHHHhhh---cCCCCCCceeEEEecCCCcccccc--ChHHHHHHHHHHHhc
Q 020518 256 QGM-EIAIVRAEKSDRWDPDVIQRLEGLANR---QGDGSEGKVSVHVLPNAGHWVHVD--NPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 324 (325)
..+ |+|+++|++|..+++.....+.+.++. .+. .+++++++++||..... ++.++.+.+.+||..
T Consensus 645 ~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~----~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 715 (741)
T 1yr2_A 645 VDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPK----PHLIRIETRAGHGSGKPIDKQIEETADVQAFLAH 715 (741)
T ss_dssp SCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSS----CEEEEEC---------CHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCC----CEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 123 999999999999999888888877766 332 38999999999997664 345788889999864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=146.71 Aligned_cols=195 Identities=19% Similarity=0.187 Sum_probs=133.8
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC------CCCCCCCCC----C
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR------NHGRSAEIE----G 98 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~------G~G~S~~~~----~ 98 (325)
.+.|...++ .+.+..|.|||+||+|++...|..+.+.|...+ .++.+++++-| |.|.+-.+. .
T Consensus 52 ~l~y~~~p~-~~~~~~plVI~LHG~G~~~~~~~~~~~~l~~~~------~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~ 124 (285)
T 4fhz_A 52 KLTFGRRGA-APGEATSLVVFLHGYGADGADLLGLAEPLAPHL------PGTAFVAPDAPEPCRANGFGFQWFPIPWLDG 124 (285)
T ss_dssp CCCEEEEES-CTTCCSEEEEEECCTTBCHHHHHTTHHHHGGGS------TTEEEEEECCSEECTTSSSCEESSCCHHHHC
T ss_pred cceeecCCC-CCCCCCcEEEEEcCCCCCHHHHHHHHHHHHHhC------CCeEEEecCCCcccccCCCcccccccccccC
Confidence 355666554 334567889999999999999999999998766 78999998754 344331110 0
Q ss_pred CCC---CCCHHHHHHHHHHHHH----HhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 99 LDP---PHDIANAANDLANLVK----AKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 99 ~~~---~~~~~~~~~~l~~~l~----~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
... ...+.+.++++.++++ ..+++ .+++++|+|+||.+++.++.++|+ ++.++|.+++.....
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~--------~~a~vv~~sG~l~~~- 195 (285)
T 4fhz_A 125 SSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAE--------EIAGIVGFSGRLLAP- 195 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSS--------CCSEEEEESCCCSCH-
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcc--------cCceEEEeecCccCc-
Confidence 000 0112233445555544 33442 279999999999999999999999 999999887642110
Q ss_pred CCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
. .. ..
T Consensus 196 -------------------------~-------------~~----~~--------------------------------- 200 (285)
T 4fhz_A 196 -------------------------E-------------RL----AE--------------------------------- 200 (285)
T ss_dssp -------------------------H-------------HH----HH---------------------------------
T ss_pred -------------------------h-------------hh----hh---------------------------------
Confidence 0 00 00
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....++|+++++|++|++++.+..+.+.+.+...+.. +++++++++||.+. +++ .+.+.+||++
T Consensus 201 --~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~----~~~~~y~g~gH~i~---~~~-l~~~~~fL~~ 264 (285)
T 4fhz_A 201 --EARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFT----TYGHVMKGTGHGIA---PDG-LSVALAFLKE 264 (285)
T ss_dssp --HCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC----EEEEEETTCCSSCC---HHH-HHHHHHHHHH
T ss_pred --hhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCC----EEEEEECCCCCCCC---HHH-HHHHHHHHHH
Confidence 0012369999999999999999999888888876653 89999999999874 344 4567778754
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=148.29 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=88.5
Q ss_pred cccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHH---HHHHHhhhhccCCCCceEEEEeCC--CCCCCCCCCCC-
Q 020518 26 SLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSF---SRNLASTLSQTSASSEWRMVLVDL--RNHGRSAEIEG- 98 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~vi~~D~--~G~G~S~~~~~- 98 (325)
.+..+.+..+-+... ....|+||++||++++...|... ...+.+ .||.|+++|. ||+|.+.....
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~--------~g~~vv~~d~~~rG~~~~~~~~~~ 97 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASE--------HGLVVIAPDTSPRGCNIKGEDESW 97 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHH--------HTCEEEEECSCSSCCCC-------
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcchHHHHhhc--------CCeEEEEeccccCccccccccccc
Confidence 466777777766431 23568899999999998888765 466665 7999999999 77665432100
Q ss_pred ----------CCCC-------CCHHHHHHHHHHHHH-HhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcce
Q 020518 99 ----------LDPP-------HDIANAANDLANLVK-AKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQ 158 (325)
Q Consensus 99 ----------~~~~-------~~~~~~~~~l~~~l~-~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~ 158 (325)
.... ......++++..+++ .+++ + +++++||||||.+|+.+|.++|+ ++++
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~ 168 (282)
T 3fcx_A 98 DFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQ-RMSIFGHSMGGHGALICALKNPG--------KYKS 168 (282)
T ss_dssp -CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEE-EEEEEEETHHHHHHHHHHHTSTT--------TSSC
T ss_pred cccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCcc-ceEEEEECchHHHHHHHHHhCcc--------cceE
Confidence 0000 112345667777777 4443 5 89999999999999999999999 9999
Q ss_pred EEEEecCC
Q 020518 159 LWVLDSVP 166 (325)
Q Consensus 159 lvli~~~~ 166 (325)
++++++..
T Consensus 169 ~v~~s~~~ 176 (282)
T 3fcx_A 169 VSAFAPIC 176 (282)
T ss_dssp EEEESCCC
T ss_pred EEEeCCcc
Confidence 99998764
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-20 Score=158.11 Aligned_cols=108 Identities=19% Similarity=0.224 Sum_probs=89.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCce---EEEEeCCCCCCCC-----CCCC-C--------------
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEW---RMVLVDLRNHGRS-----AEIE-G-------------- 98 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~vi~~D~~G~G~S-----~~~~-~-------------- 98 (325)
+++++|||+||++++...|..++..|.+ .|| +|+++|+||||.| +... +
T Consensus 20 ~~~ppVVLlHG~g~s~~~w~~la~~La~--------~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id 91 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAGQFESQGMRFAA--------NGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIID 91 (484)
T ss_dssp -CCCCEEEECCTTCCGGGGHHHHHHHHH--------TTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHH--------cCCCcceEEEEECCCCCccccccccccccccccccccccccccc
Confidence 3578999999999999999999999997 789 7999999999976 1100 0
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc---ccccCCccCCcceEEEE
Q 020518 99 -------------LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA---RADYGQFVALPKQLWVL 162 (325)
Q Consensus 99 -------------~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~~~~~~~~~v~~lvli 162 (325)
....++.+++++++..++++++.+ +++++||||||.+++.++.++| + +|+++|++
T Consensus 92 ~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~-kV~LVGHSmGG~IAl~~A~~~Pe~~~--------~V~~LVlI 162 (484)
T 2zyr_A 92 PETLDKILSKSRERLIDETFSRLDRVIDEALAESGAD-KVDLVGHSMGTFFLVRYVNSSPERAA--------KVAHLILL 162 (484)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCS-CEEEEEETHHHHHHHHHHHTCHHHHH--------TEEEEEEE
T ss_pred cccccccccccccCchhhhHHHHHHHHHHHHHHhCCC-CEEEEEECHHHHHHHHHHHHCccchh--------hhCEEEEE
Confidence 001235667778888888888988 9999999999999999999997 5 89999999
Q ss_pred ecCC
Q 020518 163 DSVP 166 (325)
Q Consensus 163 ~~~~ 166 (325)
+++.
T Consensus 163 app~ 166 (484)
T 2zyr_A 163 DGVW 166 (484)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 9764
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-19 Score=153.09 Aligned_cols=90 Identities=17% Similarity=0.045 Sum_probs=71.1
Q ss_pred CCCceEEEecCCCCCCCC-----------hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC-------C
Q 020518 42 PYTSTAFVLHGLLGSGRN-----------WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP-------H 103 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~-------~ 103 (325)
...|+||++||++++... |..++..|.+ +||.|+++|+||||.|..... .. .
T Consensus 77 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~G~~V~~~D~~G~G~s~~~~~--~~~~~~~~~~ 146 (397)
T 3h2g_A 77 GPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLAS--------QGYVVVGSDYLGLGKSNYAYH--PYLHSASEAS 146 (397)
T ss_dssp SCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGG--------GTCEEEEECCTTSTTCCCSSC--CTTCHHHHHH
T ss_pred CCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHH--------CCCEEEEecCCCCCCCCCCcc--chhhhhhHHH
Confidence 346789999999998765 5667777776 899999999999999975432 12 2
Q ss_pred CHHHHHHHHHHHHHHhCC---CCCEEEEEeChhHHHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGW---DWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
.+.+.++++..+++++++ + +++++||||||.+++.++.
T Consensus 147 ~~~d~~~~~~~~~~~~~~~~~~-~i~l~G~S~GG~~a~~~a~ 187 (397)
T 3h2g_A 147 ATIDAMRAARSVLQHLKTPLSG-KVMLSGYSQGGHTAMATQR 187 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEE-EEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCC-cEEEEEECHHHHHHHHHHH
Confidence 455667777888888877 5 9999999999999998873
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.6e-19 Score=139.91 Aligned_cols=198 Identities=14% Similarity=0.143 Sum_probs=134.3
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC--------------CC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH--------------GR 92 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~--------------G~ 92 (325)
...+.|..+.+.. +.+.+|||+||+|++...|..+.+.+...+ .++++++++-|-. ..
T Consensus 22 ~~~l~y~ii~P~~--~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~------~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~ 93 (246)
T 4f21_A 22 SNAMNYELMEPAK--QARFCVIWLHGLGADGHDFVDIVNYFDVSL------DEIRFIFPHADIIPVTINMGMQMRAWYDI 93 (246)
T ss_dssp -CCCCEEEECCSS--CCCEEEEEEEC--CCCCCGGGGGGGCCSCC------TTEEEEEECGGGSCTTTHHHHHHHSCTTC
T ss_pred cCCcCceEeCCCC--cCCeEEEEEcCCCCCHHHHHHHHHHhhhcC------CCeEEEeCCCCccccccCCCCCccccccc
Confidence 3467788776642 457899999999999999998888776554 6789999875421 11
Q ss_pred CCCCCC----CCCCCCHHHHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 93 SAEIEG----LDPPHDIANAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 93 S~~~~~----~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
...... ......+.+.++.+..+++.. ..+ +++++|+|+||++++.++.++|+ ++.+++.++
T Consensus 94 ~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~-ri~l~GfSqGg~~a~~~~~~~~~--------~~a~~i~~s 164 (246)
T 4f21_A 94 KSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASE-NIILAGFSQGGIIATYTAITSQR--------KLGGIMALS 164 (246)
T ss_dssp CCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGG-GEEEEEETTTTHHHHHHHTTCSS--------CCCEEEEES
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChh-cEEEEEeCchHHHHHHHHHhCcc--------ccccceehh
Confidence 111000 001224555666666666532 335 89999999999999999999999 999999998
Q ss_pred cCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc
Q 020518 164 SVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (325)
+..... . . +..
T Consensus 165 G~lp~~----------~--------------------~-------------~~~-------------------------- 175 (246)
T 4f21_A 165 TYLPAW----------D--------------------N-------------FKG-------------------------- 175 (246)
T ss_dssp CCCTTH----------H--------------------H-------------HST--------------------------
T ss_pred hccCcc----------c--------------------c-------------ccc--------------------------
Confidence 753110 0 0 000
Q ss_pred CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 244 EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.......++|+++++|++|+++|.+..+.+.+.+...+.. +++..++++||.+. +++ .+.+.+||+
T Consensus 176 ------~~~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~----v~~~~y~g~gH~i~---~~~-l~~~~~fL~ 241 (246)
T 4f21_A 176 ------KITSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFA----NEYKHYVGMQHSVC---MEE-IKDISNFIA 241 (246)
T ss_dssp ------TCCGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCC----EEEEEESSCCSSCC---HHH-HHHHHHHHH
T ss_pred ------cccccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCC----eEEEEECCCCCccC---HHH-HHHHHHHHH
Confidence 0000112379999999999999999999998888876543 89999999999874 344 356778886
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 242 k 242 (246)
T 4f21_A 242 K 242 (246)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=148.12 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=86.5
Q ss_pred CCCceEEEecCCCCCC-CChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 42 PYTSTAFVLHGLLGSG-RNWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~-~~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
..+++|||+||++++. ..|. .+.+.|.+ .||+|+++|+||||.++. ..+.+++++.+..+++..
T Consensus 63 ~~~~pVVLvHG~~~~~~~~w~~~l~~~L~~--------~Gy~V~a~DlpG~G~~~~------~~~~~~la~~I~~l~~~~ 128 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQSFDSNWIPLSAQ--------LGYTPCWISPPPFMLNDT------QVNTEYMVNAITTLYAGS 128 (316)
T ss_dssp BCSSEEEEECCTTCCHHHHHTTTHHHHHHH--------TTCEEEEECCTTTTCSCH------HHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCCCCcHHHHHHHHHHHHHH--------CCCeEEEecCCCCCCCcH------HHHHHHHHHHHHHHHHHh
Confidence 3578999999999987 6898 89999987 899999999999997642 235667777888888888
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHcc---ccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCA---RADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+ +++||||||||.++..++..+| + +|+++|+++++.
T Consensus 129 g~~-~v~LVGHSmGGlvA~~al~~~p~~~~--------~V~~lV~lapp~ 169 (316)
T 3icv_A 129 GNN-KLPVLTWSQGGLVAQWGLTFFPSIRS--------KVDRLMAFAPDY 169 (316)
T ss_dssp TSC-CEEEEEETHHHHHHHHHHHHCGGGTT--------TEEEEEEESCCT
T ss_pred CCC-ceEEEEECHHHHHHHHHHHhccccch--------hhceEEEECCCC
Confidence 888 9999999999999987777764 5 999999999864
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-19 Score=144.45 Aligned_cols=222 Identities=15% Similarity=0.196 Sum_probs=133.5
Q ss_pred cccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCC----------
Q 020518 26 SLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHG---------- 91 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G---------- 91 (325)
.+..+.+..+.+... ....|+||++||++++...|.. +...+.+ .|+.|+++|.+++|
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~--------~g~~vv~~d~~~rg~~~~~~~~~~ 103 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAE--------HQVIVVAPDTSPRGEQVPNDDAYD 103 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHH--------HTCEEEEECSSCCSTTSCCCSSTT
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhh--------CCeEEEEecccccccccccccccc
Confidence 466777777766432 3456899999999998887754 3344444 68999999986433
Q ss_pred ----CCCCCCCCC----CCCC-HHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEE
Q 020518 92 ----RSAEIEGLD----PPHD-IANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLW 160 (325)
Q Consensus 92 ----~S~~~~~~~----~~~~-~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lv 160 (325)
.+....... ..+. .+.+++++..++++. ..+ +++|+||||||.+|+.++.++|+ ++++++
T Consensus 104 ~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~G~S~GG~~a~~~a~~~p~--------~~~~~~ 174 (283)
T 4b6g_A 104 LGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNG-KRSIMGHSMGGHGALVLALRNQE--------RYQSVS 174 (283)
T ss_dssp SBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEE-EEEEEEETHHHHHHHHHHHHHGG--------GCSCEE
T ss_pred ccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCC-CeEEEEEChhHHHHHHHHHhCCc--------cceeEE
Confidence 331111000 1112 444567888888876 335 89999999999999999999999 999999
Q ss_pred EEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCccccc-ccChhHHHHhh
Q 020518 161 VLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETW-AFNLDGAVQMF 239 (325)
Q Consensus 161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 239 (325)
++++........ .... . ...++... ...+ ..+..
T Consensus 175 ~~s~~~~~~~~~----~~~~-----------------~------------~~~~~g~~------~~~~~~~~~~------ 209 (283)
T 4b6g_A 175 AFSPILSPSLVP----WGEK-----------------A------------FTAYLGKD------REKWQQYDAN------ 209 (283)
T ss_dssp EESCCCCGGGSH----HHHH-----------------H------------HHHHHCSC------GGGGGGGCHH------
T ss_pred EECCccccccCc----chhh-----------------h------------HHhhcCCc------hHHHHhcCHH------
Confidence 999864321100 0000 0 00011100 0000 00010
Q ss_pred hcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHH
Q 020518 240 NSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 318 (325)
..+.......|+++++|+.|..++... .+.+.+.+...+. ++++.++++++|.... .+.....+
T Consensus 210 ---------~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~----~~~~~~~~g~~H~~~~--~~~~l~~~ 274 (283)
T 4b6g_A 210 ---------SLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQ----PVDVRFHKGYDHSYYF--IASFIGEH 274 (283)
T ss_dssp ---------HHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTC----CCEEEEETTCCSSHHH--HHHHHHHH
T ss_pred ---------HHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCC----CceEEEeCCCCcCHhH--HHHHHHHH
Confidence 011111223599999999999887521 4455555544332 2899999999997643 23444555
Q ss_pred HHHHhc
Q 020518 319 APRIAS 324 (325)
Q Consensus 319 ~~fl~~ 324 (325)
.+|+.+
T Consensus 275 l~~~~~ 280 (283)
T 4b6g_A 275 IAYHAA 280 (283)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 566643
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=158.91 Aligned_cols=235 Identities=13% Similarity=0.081 Sum_probs=142.9
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC---
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE--- 97 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~--- 97 (325)
.+|..+.+..+.+.. .....|+||++||.++.... |......|.+. +||.|+++|+||+|.+....
T Consensus 445 ~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-------~G~~v~~~d~rG~g~~g~~~~~~ 517 (710)
T 2xdw_A 445 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRH-------MGGVLAVANIRGGGEYGETWHKG 517 (710)
T ss_dssp TTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHH-------HCCEEEEECCTTSSTTHHHHHHT
T ss_pred CCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHh-------CCcEEEEEccCCCCCCChHHHHh
Confidence 467788887776543 23457899999998776543 44444445431 58999999999998763210
Q ss_pred C--CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 98 G--LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 98 ~--~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
. ......++++.+.+..++++- +.+ ++.++|||+||.+++.++.++|+ +++++|+..+.........
T Consensus 518 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~-~i~i~G~S~GG~la~~~a~~~p~--------~~~~~v~~~~~~d~~~~~~ 588 (710)
T 2xdw_A 518 GILANKQNCFDDFQCAAEYLIKEGYTSPK-RLTINGGSNGGLLVATCANQRPD--------LFGCVIAQVGVMDMLKFHK 588 (710)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGG-GEEEEEETHHHHHHHHHHHHCGG--------GCSEEEEESCCCCTTTGGG
T ss_pred hhhhcCCchHHHHHHHHHHHHHcCCCCcc-eEEEEEECHHHHHHHHHHHhCcc--------ceeEEEEcCCcccHhhccc
Confidence 0 001122344444444444441 345 89999999999999999999999 9999999987643321100
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc-
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE- 252 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 252 (325)
. . ....+. ..+ .. .. ..... ..+..+.. ...+.
T Consensus 589 --------------~--~-~~~~~~-------------~~~-g~----~~-------~~~~~-~~~~~~sp---~~~~~~ 622 (710)
T 2xdw_A 589 --------------Y--T-IGHAWT-------------TDY-GC----SD-------SKQHF-EWLIKYSP---LHNVKL 622 (710)
T ss_dssp --------------S--T-TGGGGH-------------HHH-CC----TT-------SHHHH-HHHHHHCG---GGCCCC
T ss_pred --------------c--C-CChhHH-------------HhC-CC----CC-------CHHHH-HHHHHhCc---Hhhhcc
Confidence 0 0 000000 000 00 00 00000 00011110 11112
Q ss_pred ----CCCCCC-cEEEEeeCCCCCCChHHHHHHHHHhhhc----CCCCCCceeEEEecCCCcccccc--ChHHHHHHHHHH
Q 020518 253 ----HPPQGM-EIAIVRAEKSDRWDPDVIQRLEGLANRQ----GDGSEGKVSVHVLPNAGHWVHVD--NPKGLLEIVAPR 321 (325)
Q Consensus 253 ----~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~f 321 (325)
.+ .+ |+|+++|++|..+++.....+.+.++.. .. ....+++++++++||..... ++.++.+.+.+|
T Consensus 623 ~~~~~~--~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 699 (710)
T 2xdw_A 623 PEADDI--QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRK-QNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAF 699 (710)
T ss_dssp CSSTTC--CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTT-CCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHH
T ss_pred cccccC--CCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccC-CCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 22 35 9999999999999998888887777653 00 00137999999999998763 456888889999
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
|.+
T Consensus 700 l~~ 702 (710)
T 2xdw_A 700 IAR 702 (710)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-18 Score=145.02 Aligned_cols=105 Identities=20% Similarity=0.184 Sum_probs=79.3
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC--------------C------C
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--------------P------P 102 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~--------------~------~ 102 (325)
..|+|||+||++++...|..++..|++ .||.|+++|+||+|.|....... . .
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~--------~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLAS--------HGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEE 168 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHH--------TTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHh--------CceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccc
Confidence 468899999999999999999999998 89999999999999875310000 0 0
Q ss_pred -----CCHHHHHHHHHHHHHHh--------------------------CCCCCEEEEEeChhHHHHHHHHHHccccccCC
Q 020518 103 -----HDIANAANDLANLVKAK--------------------------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQ 151 (325)
Q Consensus 103 -----~~~~~~~~~l~~~l~~~--------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~ 151 (325)
..++..++|+..+++.+ +.+ ++.++|||+||.+++.++.+.+
T Consensus 169 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~~------ 241 (383)
T 3d59_A 169 THIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDRE-KIAVIGHSFGGATVIQTLSEDQ------ 241 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEE-EEEEEEETHHHHHHHHHHHHCT------
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhcccccc-ceeEEEEChhHHHHHHHHhhCC------
Confidence 11223355666655433 234 7999999999999999988765
Q ss_pred ccCCcceEEEEecC
Q 020518 152 FVALPKQLWVLDSV 165 (325)
Q Consensus 152 ~~~~v~~lvli~~~ 165 (325)
+++++|++++.
T Consensus 242 ---~v~a~v~~~~~ 252 (383)
T 3d59_A 242 ---RFRCGIALDAW 252 (383)
T ss_dssp ---TCCEEEEESCC
T ss_pred ---CccEEEEeCCc
Confidence 69999999864
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-17 Score=135.73 Aligned_cols=124 Identities=17% Similarity=0.194 Sum_probs=88.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCCh-HHHHHHHHhhhhccCCCCceEEEEeCCC------------CC-
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-RSFSRNLASTLSQTSASSEWRMVLVDLR------------NH- 90 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~------------G~- 90 (325)
.++.++.+..+.+....+..|+||++||++++...| ..+...+.+ .||.|+++|+| |+
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~~~~~p~~~~~~~g~~ 106 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADR--------HKLLIVAPTFSDEIWPGVESYNNGRA 106 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHHH--------HTCEEEEEECCTTTSCHHHHTTTTTC
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHH--------CCcEEEEeCCccccCCCccccccCcc
Confidence 456788887766644334678999999999998877 556777776 79999999999 66
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 91 -GRSAEIEGLDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 91 -G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
|.|..+... ....++++.+.+..+.+.. +.+ +++|+||||||.+++.++.++|+ .+++++|++++.
T Consensus 107 ~g~s~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~i~l~G~S~GG~~a~~~a~~~p~-------~~~~~~vl~~~~ 175 (304)
T 3d0k_A 107 FTAAGNPRHV-DGWTYALVARVLANIRAAEIADCE-QVYLFGHSAGGQFVHRLMSSQPH-------APFHAVTAANPG 175 (304)
T ss_dssp BCTTSCBCCG-GGSTTHHHHHHHHHHHHTTSCCCS-SEEEEEETHHHHHHHHHHHHSCS-------TTCSEEEEESCS
T ss_pred ccccCCCCcc-cchHHHHHHHHHHHHHhccCCCCC-cEEEEEeChHHHHHHHHHHHCCC-------CceEEEEEecCc
Confidence 666543210 1234444433333333332 345 89999999999999999999994 168898887754
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-17 Score=142.35 Aligned_cols=200 Identities=13% Similarity=0.033 Sum_probs=133.5
Q ss_pred cccceEEEEcccCC--CCCCCceEEEecCCCCCCCChHHHHH------HHHhhhhccCCCCceEEEEeCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGRNWRSFSR------NLASTLSQTSASSEWRMVLVDLRNHGRSAEIE 97 (325)
Q Consensus 26 ~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 97 (325)
+|..+.|..+.+.. +....|+||++||++++...+..... .+.... -....++.|+++|.+|.+......
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~vv~pd~~g~~~~~~~~ 231 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPR--YQVVHPCFVLAPQCPPNSSWSTLF 231 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHH--HHTTSCCEEEEECCCTTCCSBTTT
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCcc--ccccCCEEEEEecCCCCCcccccc
Confidence 57789998887754 23345889999999876544321110 000000 000167899999999765432211
Q ss_pred ---C--CCCCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC
Q 020518 98 ---G--LDPPHDIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT 171 (325)
Q Consensus 98 ---~--~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~ 171 (325)
. .......++..+.+..+++..+++ .+++|+||||||.+++.++.++|+ ++++++++++...
T Consensus 232 ~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~sg~~~---- 299 (380)
T 3doh_A 232 TDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPE--------LFAAAIPICGGGD---- 299 (380)
T ss_dssp TCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTT--------TCSEEEEESCCCC----
T ss_pred cccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCc--------cceEEEEecCCCC----
Confidence 0 001345666777777777777653 269999999999999999999999 9999999987630
Q ss_pred CCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 172 ENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
. ..+
T Consensus 300 ------------------------------------------------------------~----------------~~~ 303 (380)
T 3doh_A 300 ------------------------------------------------------------V----------------SKV 303 (380)
T ss_dssp ------------------------------------------------------------G----------------GGG
T ss_pred ------------------------------------------------------------h----------------hhh
Confidence 0 000
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCC--------CccccccChHHHHH--HHHHH
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNA--------GHWVHVDNPKGLLE--IVAPR 321 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------gH~~~~e~p~~~~~--~i~~f 321 (325)
..+ ..+|+++++|++|..++++..+.+.+.+...+. ++++++++++ ||.... .... .+.+|
T Consensus 304 ~~~-~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~----~~~~~~~~~~~h~~h~~~~H~~~~----~~~~~~~i~~w 374 (380)
T 3doh_A 304 ERI-KDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGG----KVRYTEYEKGFMEKHGWDPHGSWI----PTYENQEAIEW 374 (380)
T ss_dssp GGG-TTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC----CEEEEEECTTHHHHTTCCTTCTHH----HHHTCHHHHHH
T ss_pred hhc-cCCCEEEEecCCCCccCHHHHHHHHHHHHHCCC----ceEEEEecCCcccCCCCCCchhHH----HhcCCHHHHHH
Confidence 111 126999999999999999888888888776543 3899999999 776432 2222 67778
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
|.+
T Consensus 375 L~~ 377 (380)
T 3doh_A 375 LFE 377 (380)
T ss_dssp HHT
T ss_pred HHh
Confidence 754
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.7e-18 Score=156.74 Aligned_cols=237 Identities=12% Similarity=0.041 Sum_probs=142.6
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC----
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI---- 96 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~---- 96 (325)
.+|..+.+..+.+.. .....|+||++||.++... .|......|++ +||.|+++|+||+|.+...
T Consensus 488 ~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~RG~g~~G~~~~~~ 559 (751)
T 2xe4_A 488 PDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCD--------RGMIFAIAHIRGGSELGRAWYEI 559 (751)
T ss_dssp TTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHT--------TTCEEEEECCTTSCTTCTHHHHT
T ss_pred CCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHh--------CCcEEEEEeeCCCCCcCcchhhc
Confidence 467778766554432 2245789999999877554 46666667776 8999999999999975321
Q ss_pred CCC--CCCCCHHHHHHHHHHHHHH--hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 97 EGL--DPPHDIANAANDLANLVKA--KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 97 ~~~--~~~~~~~~~~~~l~~~l~~--~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
... ....+++++++.+..++++ .+.+ ++.++|+|+||.+++.++.++|+ +++++|+..+....
T Consensus 560 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~-ri~i~G~S~GG~la~~~a~~~p~--------~~~a~v~~~~~~d~---- 626 (751)
T 2xe4_A 560 GAKYLTKRNTFSDFIAAAEFLVNAKLTTPS-QLACEGRSAGGLLMGAVLNMRPD--------LFKVALAGVPFVDV---- 626 (751)
T ss_dssp TSSGGGTHHHHHHHHHHHHHHHHTTSCCGG-GEEEEEETHHHHHHHHHHHHCGG--------GCSEEEEESCCCCH----
T ss_pred cccccccCccHHHHHHHHHHHHHCCCCCcc-cEEEEEECHHHHHHHHHHHhCch--------heeEEEEeCCcchH----
Confidence 100 0123456666666666655 2345 89999999999999999999999 99999998875321
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
.. .+.. ...+. ....| .. . ... .+...+ ..+..+. ....+.
T Consensus 627 ------~~---~~~~--~~~~~---------------~~~~~-~~-~---g~p----~~~~~~-~~~~~~s---p~~~~~ 667 (751)
T 2xe4_A 627 ------MT---TMCD--PSIPL---------------TTGEW-EE-W---GNP----NEYKYY-DYMLSYS---PMDNVR 667 (751)
T ss_dssp ------HH---HHTC--TTSTT---------------HHHHT-TT-T---CCT----TSHHHH-HHHHHHC---TGGGCC
T ss_pred ------Hh---hhcc--cCccc---------------chhhH-HH-c---CCC----CCHHHH-HHHHhcC---hhhhhc
Confidence 00 0000 00000 00000 00 0 000 001111 1111111 112233
Q ss_pred CCCCCCc-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH--HHHHHHHHHHhc
Q 020518 253 HPPQGME-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK--GLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~--~~~~~i~~fl~~ 324 (325)
.+ ++| +|+++|++|..+++.....+.+.+...+... ..+.+.+++++||....+.++ +..+.+.+||.+
T Consensus 668 ~~--~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~ 739 (751)
T 2xe4_A 668 AQ--EYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDN-NEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCK 739 (751)
T ss_dssp SS--CCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSC-CCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred cC--CCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCC-ceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHH
Confidence 33 376 9999999999999988888887776542100 014556669999998765544 344567788753
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=143.93 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=94.4
Q ss_pred CCCceEEEecCCCCCC------CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSG------RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~ 115 (325)
+++++|||+||++++. ..|..+.+.|.+ .||+|+++|+||+|.|..+ ..+.+++++++.++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~--------~G~~V~~~d~~g~g~s~~~-----~~~~~~l~~~i~~~ 72 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQ--------RGATVYVANLSGFQSDDGP-----NGRGEQLLAYVKTV 72 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHH--------TTCCEEECCCCSSCCSSST-----TSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHh--------CCCEEEEEcCCCCCCCCCC-----CCCHHHHHHHHHHH
Confidence 3578999999999988 789999999997 8999999999999998653 46889999999999
Q ss_pred HHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 116 VKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 116 l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++.++.+ +++++||||||.+++.++.++|+ +|+++|+++++.
T Consensus 73 l~~~~~~-~v~lvGHS~GG~va~~~a~~~p~--------~V~~lV~i~~p~ 114 (320)
T 1ys1_X 73 LAATGAT-KVNLVGHSQGGLTSRYVAAVAPD--------LVASVTTIGTPH 114 (320)
T ss_dssp HHHHCCS-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCT
T ss_pred HHHhCCC-CEEEEEECHhHHHHHHHHHhChh--------hceEEEEECCCC
Confidence 9999988 99999999999999999999999 999999999754
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=153.24 Aligned_cols=235 Identities=12% Similarity=0.052 Sum_probs=138.8
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC---
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE--- 97 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~--- 97 (325)
.+|..+.+..+.+.. .....|+||++||..+.. ..|......|.+ +||.|+++|+||.|......
T Consensus 433 ~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~RG~g~~g~~~~~~ 504 (693)
T 3iuj_A 433 KDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLD--------LGGVYAVANLRGGGEYGQAWHLA 504 (693)
T ss_dssp TTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHH--------TTCEEEEECCTTSSTTCHHHHHT
T ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHH--------CCCEEEEEeCCCCCccCHHHHHh
Confidence 467778877766543 234578999999986643 446666667776 89999999999988653211
Q ss_pred C--CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 98 G--LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 98 ~--~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
. ......++++++.+..++++- +.+ ++.++|||+||.+++.++.++|+ +++++|+..+.........
T Consensus 505 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~-ri~i~G~S~GG~la~~~~~~~p~--------~~~a~v~~~~~~d~~~~~~ 575 (693)
T 3iuj_A 505 GTQQNKQNVFDDFIAAAEYLKAEGYTRTD-RLAIRGGSNGGLLVGAVMTQRPD--------LMRVALPAVGVLDMLRYHT 575 (693)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGG-GEEEEEETHHHHHHHHHHHHCTT--------SCSEEEEESCCCCTTTGGG
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCCcc-eEEEEEECHHHHHHHHHHhhCcc--------ceeEEEecCCcchhhhhcc
Confidence 0 001113445555555555442 235 89999999999999999999999 9999999887653321100
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
... ... ....+ .. .. ........+..+. ....+..
T Consensus 576 --------------~~~---~~~-------------~~~~~-g~----p~-------~~~~~~~~~~~~s---p~~~~~~ 610 (693)
T 3iuj_A 576 --------------FTA---GTG-------------WAYDY-GT----SA-------DSEAMFDYLKGYS---PLHNVRP 610 (693)
T ss_dssp --------------SGG---GGG-------------CHHHH-CC----TT-------SCHHHHHHHHHHC---HHHHCCT
T ss_pred --------------CCC---chh-------------HHHHc-CC----cc-------CHHHHHHHHHhcC---HHHhhcc
Confidence 000 000 00000 00 00 0000000111111 1112222
Q ss_pred -CCCCCc-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc--cChHHHHHHHHHHHhc
Q 020518 254 -PPQGME-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV--DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 -~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--e~p~~~~~~i~~fl~~ 324 (325)
+. +| +|+++|++|..+++.....+.+.+...+.. ...+++++++++||.... ++..++.+.+.+||..
T Consensus 611 ~~~--~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 682 (693)
T 3iuj_A 611 GVS--YPSTMVTTADHDDRVVPAHSFKFAATLQADNAG-PHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLY 682 (693)
T ss_dssp TCC--CCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCS-SSCEEEEEEC-------CHHHHHHHHHHHHHHHHHH
T ss_pred cCC--CCceeEEecCCCCCCChhHHHHHHHHHHhhCCC-CCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 23 66 999999999999998888888777664210 012899999999998775 4567788888899864
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-16 Score=146.01 Aligned_cols=250 Identities=12% Similarity=0.100 Sum_probs=147.3
Q ss_pred ccccccc--eEEEEcccCCCCCCCceEEEecCCCCCCC------------------------------------------
Q 020518 23 TTRSLQT--LAYEEVRSSSDRPYTSTAFVLHGLLGSGR------------------------------------------ 58 (325)
Q Consensus 23 ~~~~~~~--l~y~~~~~~~~~~~~~~vv~~HG~~~~~~------------------------------------------ 58 (325)
+..+|.+ |....+.+... ..-|+||..||++....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~-~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~ 257 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST-EKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPI 257 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS-SCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCE
T ss_pred cCCCCCeeeEEEEEEecCCC-CcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccccc
Confidence 4568888 98888877532 33478888999875311
Q ss_pred ------Ch-----HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------
Q 020518 59 ------NW-----RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW------ 121 (325)
Q Consensus 59 ------~~-----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~------ 121 (325)
.| ..+...|++ +||.|+++|.||+|.|.... ..+.. +.++|+.++++.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~la~--------~GYaVv~~D~RG~G~S~G~~---~~~~~-~e~~D~~a~IdwL~~~~~~~~ 325 (763)
T 1lns_A 258 VDKAPYRFTHGWTYSLNDYFLT--------RGFASIYVAGVGTRSSDGFQ---TSGDY-QQIYSMTAVIDWLNGRARAYT 325 (763)
T ss_dssp ESSCSCBCCCCCCCHHHHHHHT--------TTCEEEEECCTTSTTSCSCC---CTTSH-HHHHHHHHHHHHHTTSSCEES
T ss_pred cccchhccccccccchHHHHHH--------CCCEEEEECCCcCCCCCCcC---CCCCH-HHHHHHHHHHHHHhhcccccc
Confidence 11 123456666 89999999999999998754 23333 567888888887752
Q ss_pred -------------CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh--
Q 020518 122 -------------DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ-- 186 (325)
Q Consensus 122 -------------~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~-- 186 (325)
..++.++||||||.+++.+|.++|+ .++++|..++.... ........
T Consensus 326 d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~--------~lkaiV~~~~~~d~----------~~~~~~~g~~ 387 (763)
T 1lns_A 326 SRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVE--------GLELILAEAGISSW----------YNYYRENGLV 387 (763)
T ss_dssp STTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCT--------TEEEEEEESCCSBH----------HHHHBSSSSB
T ss_pred cccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCc--------ccEEEEEecccccH----------HHHhhhcchh
Confidence 1279999999999999999999998 89999998875310 00000000
Q ss_pred cCCCCCC--cHHHHHHHHHhhcc------------chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 187 SLPSSIP--SRKWLVNHMMELGF------------SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 187 ~~~~~~~--~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
......+ ....+......... ......+.......... .. .. +...+....+.
T Consensus 388 ~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~---w~~~s~~~~l~ 454 (763)
T 1lns_A 388 RSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGD-------YN---QF---WHDRNYLINTD 454 (763)
T ss_dssp CCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCC-------CC---HH---HHTTBGGGGGG
T ss_pred hhcccCCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHHhhhhhccCc-------hh---HH---hhccChhhHhh
Confidence 0000000 00000000000000 00000110000000000 00 00 11122334555
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
+++ +|+|+|+|..|..+++.....+.+.++. +. ...+ ++.++||+.+.+ .++.+.+.+.+||+.
T Consensus 455 ~I~--~PvLii~G~~D~~vp~~~a~~l~~al~~-~~----~~~l-~i~~~gH~~~~~~~~~~~~~~i~~Ffd~ 519 (763)
T 1lns_A 455 KVK--ADVLIVHGLQDWNVTPEQAYNFWKALPE-GH----AKHA-FLHRGAHIYMNSWQSIDFSETINAYFVA 519 (763)
T ss_dssp GCC--SEEEEEEETTCCSSCTHHHHHHHHHSCT-TC----CEEE-EEESCSSCCCTTBSSCCHHHHHHHHHHH
T ss_pred cCC--CCEEEEEECCCCCCChHHHHHHHHhhcc-CC----CeEE-EEeCCcccCccccchHHHHHHHHHHHHH
Confidence 665 8999999999999999888777777664 22 1444 556779998765 566677888888753
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-17 Score=133.40 Aligned_cols=125 Identities=16% Similarity=0.173 Sum_probs=86.1
Q ss_pred cccceEEEEcccCC--CCCCCceEEEecCCCCCCCChHHH-------HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGRNWRSF-------SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 96 (325)
.+..+.+..+.+.. .....|+||++||++++...|... ++.|.+. +...+|.|+++|.++++.+...
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~vv~~d~~~~~~~~~~ 117 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAE----GKIKPLIIVTPNTNAAGPGIAD 117 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHT----TSSCCCEEEEECCCCCCTTCSC
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHc----CCCCCEEEEEeCCCCCCccccc
Confidence 35567777766543 234578999999999887776543 5556541 0012599999999998764221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH-hCC----CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 97 EGLDPPHDIANAANDLANLVKA-KGW----DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~-~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
. .....++.++++..++++ ... + +++++||||||.+++.++.++|+ ++++++++++..
T Consensus 118 ~---~~~~~~~~~~~~~~~l~~~~~~~~d~~-~i~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~s~~~ 180 (268)
T 1jjf_A 118 G---YENFTKDLLNSLIPYIESNYSVYTDRE-HRAIAGLSMGGGQSFNIGLTNLD--------KFAYIGPISAAP 180 (268)
T ss_dssp H---HHHHHHHHHHTHHHHHHHHSCBCCSGG-GEEEEEETHHHHHHHHHHHTCTT--------TCSEEEEESCCT
T ss_pred c---HHHHHHHHHHHHHHHHHhhcCCCCCCC-ceEEEEECHHHHHHHHHHHhCch--------hhhheEEeCCCC
Confidence 0 001122335566666654 332 5 89999999999999999999999 999999999764
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.2e-19 Score=151.43 Aligned_cols=107 Identities=20% Similarity=0.297 Sum_probs=91.3
Q ss_pred CCCCceEEEecCCCCCC-CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG-RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++|+||++||++++. ..|.. +++.|.+. .+|+|+++|+||+|.|..+. ...+++.+++++.++++.
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~-------~~~~Vi~~D~~g~G~S~~~~---~~~~~~~~~~dl~~~i~~ 136 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRGEDSWPSDMCKKILQV-------ETTNCISVDWSSGAKAEYTQ---AVQNIRIVGAETAYLIQQ 136 (452)
T ss_dssp CTTSCEEEEECCTTCCSSSSHHHHHHHHHHTT-------SCCEEEEEECHHHHTSCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCCCchHHHHHHHHHHhh-------CCCEEEEEecccccccccHH---HHHhHHHHHHHHHHHHHH
Confidence 35689999999999988 78988 77888741 38999999999999987432 345677888999999888
Q ss_pred h----C--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 119 K----G--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 119 ~----~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+ + .+ +++|+||||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 137 L~~~~g~~~~-~i~LvGhSlGg~vA~~~a~~~p~--------~v~~iv~ldpa~ 181 (452)
T 1w52_X 137 LLTELSYNPE-NVHIIGHSLGAHTAGEAGRRLEG--------RVGRVTGLDPAE 181 (452)
T ss_dssp HHHHHCCCGG-GEEEEEETHHHHHHHHHHHHTTT--------CSSEEEEESCBC
T ss_pred HHHhcCCCcc-cEEEEEeCHHHHHHHHHHHhccc--------ceeeEEeccccc
Confidence 7 5 67 99999999999999999999999 999999999874
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=151.03 Aligned_cols=108 Identities=20% Similarity=0.342 Sum_probs=91.7
Q ss_pred CCCCceEEEecCCCCCC-CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG-RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++|+|||+||++++. ..|.. +++.|.+. .+|+|+++|+||+|.|..+. ...++..+++|+.++++.
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~-------~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~~dl~~li~~ 136 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQV-------EKVNCICVDWRRGSRTEYTQ---ASYNTRVVGAEIAFLVQV 136 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTT-------CCEEEEEEECHHHHSSCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhh-------CCCEEEEEechhcccCchhH---hHhhHHHHHHHHHHHHHH
Confidence 35689999999999988 78988 66777742 49999999999999997432 345677889999999988
Q ss_pred h----CC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 119 K----GW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 119 ~----~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+ ++ + +++|+||||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 137 L~~~~g~~~~-~i~LvGhSlGg~vA~~~a~~~p~--------~v~~iv~ldpa~p 182 (452)
T 1bu8_A 137 LSTEMGYSPE-NVHLIGHSLGAHVVGEAGRRLEG--------HVGRITGLDPAEP 182 (452)
T ss_dssp HHHHHCCCGG-GEEEEEETHHHHHHHHHHHHTTT--------CSSEEEEESCBCT
T ss_pred HHHhcCCCcc-ceEEEEEChhHHHHHHHHHhccc--------ccceEEEecCCcc
Confidence 7 54 6 99999999999999999999999 9999999998743
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=145.15 Aligned_cols=233 Identities=12% Similarity=0.050 Sum_probs=140.2
Q ss_pred ccccceEEEEcccCCC--CCCCceEEEecCCCCCCC--ChHHHH-HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC--
Q 020518 25 RSLQTLAYEEVRSSSD--RPYTSTAFVLHGLLGSGR--NWRSFS-RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE-- 97 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~--~~~~~~vv~~HG~~~~~~--~~~~~~-~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~-- 97 (325)
.+|.++.+..+.+... ....|+||++||.++... .|.... ..|.+ +||.|+.+|+||+|.+....
T Consensus 457 ~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~--------~Gy~Vv~~d~RGsg~~G~~~~~ 528 (711)
T 4hvt_A 457 FDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVK--------NAGVSVLANIRGGGEFGPEWHK 528 (711)
T ss_dssp TTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGG--------GTCEEEEECCTTSSTTCHHHHH
T ss_pred CCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHH--------CCCEEEEEeCCCCCCcchhHHH
Confidence 4788888777766432 345789999999866553 344333 35665 89999999999998763210
Q ss_pred -C--CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 98 -G--LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 98 -~--~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
. ......++++.+.+..++++- +.+ ++.++|||+||.+++.++.++|+ +++++|...+........
T Consensus 529 ~~~~~~~~~~~~D~~aav~~L~~~~~~d~~-rI~i~G~S~GG~la~~~a~~~pd--------~f~a~V~~~pv~D~~~~~ 599 (711)
T 4hvt_A 529 SAQGIKRQTAFNDFFAVSEELIKQNITSPE-YLGIKGGSNGGLLVSVAMTQRPE--------LFGAVACEVPILDMIRYK 599 (711)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSCCGG-GEEEEEETHHHHHHHHHHHHCGG--------GCSEEEEESCCCCTTTGG
T ss_pred hhhhccCcCcHHHHHHHHHHHHHcCCCCcc-cEEEEeECHHHHHHHHHHHhCcC--------ceEEEEEeCCccchhhhh
Confidence 0 001122334444444444432 224 79999999999999999999999 999999988765432100
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
.. .....+. ..+ .. .. .... ...+..+. ....+.
T Consensus 600 --------------~~---~~~~~~~-------------~~~-G~----p~-------~~~~-~~~l~~~S---P~~~v~ 633 (711)
T 4hvt_A 600 --------------EF---GAGHSWV-------------TEY-GD----PE-------IPND-LLHIKKYA---PLENLS 633 (711)
T ss_dssp --------------GS---TTGGGGH-------------HHH-CC----TT-------SHHH-HHHHHHHC---GGGSCC
T ss_pred --------------cc---ccchHHH-------------HHh-CC----Cc-------CHHH-HHHHHHcC---HHHHHh
Confidence 00 0000000 000 00 00 0000 01111111 112223
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHh-hhcCCCCCCceeEEEecCCCcccccc--ChHHHHHHHHHHHhc
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLA-NRQGDGSEGKVSVHVLPNAGHWVHVD--NPKGLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 324 (325)
.++.-.|+|+++|++|..+++.....+.+.+ ...+. .+++++++++||.+... +.....+.+.+||.+
T Consensus 634 ~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~----pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~ 704 (711)
T 4hvt_A 634 LTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNT----KTYFLESKDSGHGSGSDLKESANYFINLYTFFAN 704 (711)
T ss_dssp TTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTC----CEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCC----CEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHH
Confidence 3331139999999999999998888888777 65443 38999999999986542 344555667788753
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=9.8e-16 Score=129.87 Aligned_cols=224 Identities=16% Similarity=0.110 Sum_probs=123.9
Q ss_pred CCceEEEecCCCCC---CCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGS---GRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~---~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
..|+||++||.+.. ... |..++..|+.. .||.|+++|+|+.+.... ...+++..+.+..+.+
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~-------~g~~Vv~~dyR~~p~~~~------~~~~~D~~~a~~~l~~ 177 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKL-------SKGVVVSVNYRRAPEHRY------PCAYDDGWTALKWVMS 177 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHH-------HTSEEEEECCCCTTTSCT------THHHHHHHHHHHHHHH
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHH-------CCCEEEEeeCCCCCCCCC------cHHHHHHHHHHHHHHh
Confidence 46899999997642 222 67788888762 399999999997653322 1223333333333322
Q ss_pred Hh----CCC-C-CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 020518 118 AK----GWD-W-PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191 (325)
Q Consensus 118 ~~----~~~-~-~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (325)
.. +.+ . +++|+|||+||.+|+.++.+.++. ..+++++|++.+........ .. ... ... ..
T Consensus 178 ~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~-----~~~~~g~vl~~p~~~~~~~~--~~----~~~-~~~--~~ 243 (365)
T 3ebl_A 178 QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE-----GVKVCGNILLNAMFGGTERT--ES----ERR-LDG--KY 243 (365)
T ss_dssp CTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHT-----TCCCCEEEEESCCCCCSSCC--HH----HHH-HTT--TS
T ss_pred CchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhc-----CCceeeEEEEccccCCCcCC--hh----hhh-cCC--Cc
Confidence 21 233 2 699999999999999999987751 12699999999875432211 00 000 000 00
Q ss_pred CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
.... ....++............ .. ....+. .....+..+. -.|+++++|++|..+
T Consensus 244 ~~~~--------------~~~~~~~~~~~~~~~~~~---~~-----~~~p~~--~~~~~l~~~~-~pP~Li~~G~~D~l~ 298 (365)
T 3ebl_A 244 FVTL--------------QDRDWYWKAYLPEDADRD---HP-----ACNPFG--PNGRRLGGLP-FAKSLIIVSGLDLTC 298 (365)
T ss_dssp SCCH--------------HHHHHHHHHHSCTTCCTT---ST-----TTCTTS--TTCCCCTTSC-CCCEEEEEETTSTTH
T ss_pred ccCH--------------HHHHHHHHHhCCCCCCCC---Cc-----ccCCCC--CcchhhccCC-CCCEEEEEcCcccch
Confidence 0000 001111110000000000 00 000000 0111222111 138999999999655
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc----ccChHHHHHHHHHHHhc
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH----VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~e~p~~~~~~i~~fl~~ 324 (325)
+. ...+.+.+...+. ++++++++|++|.++ .++.+++.+.|.+||++
T Consensus 299 ~~--~~~~~~~L~~~g~----~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~ 349 (365)
T 3ebl_A 299 DR--QLAYADALREDGH----HVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNA 349 (365)
T ss_dssp HH--HHHHHHHHHHTTC----CEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHH
T ss_pred hH--HHHHHHHHHHCCC----CEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 33 3455555555433 389999999999876 45678999999999964
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-18 Score=141.68 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=92.0
Q ss_pred CCCceEEEecCCCC----------CCCCh----HHHHHHHHhhhhccCCCCceE---EEEeCCCCCCCCCCCC-CCCCCC
Q 020518 42 PYTSTAFVLHGLLG----------SGRNW----RSFSRNLASTLSQTSASSEWR---MVLVDLRNHGRSAEIE-GLDPPH 103 (325)
Q Consensus 42 ~~~~~vv~~HG~~~----------~~~~~----~~~~~~l~~~~~~~~~~~~~~---vi~~D~~G~G~S~~~~-~~~~~~ 103 (325)
..+++|||+||+++ +...| ..+++.|.+ .||+ |+++|+||+|.|..+. .....+
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~--------~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~ 109 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKA--------RGYNDCEIFGVTYLSSSEQGSAQYNYHSST 109 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHH--------TTCCTTSEEEECCSCHHHHTCGGGCCBCHH
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHh--------CCCCCCeEEEEeCCCCCccCCccccCCHHH
Confidence 45788999999999 56788 889999987 7888 9999999999886542 101235
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCC
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..+++++++..++++++.+ +++||||||||.+++.++.++ |+ +|+++|+++++..
T Consensus 110 ~~~~l~~~I~~l~~~~g~~-~v~LVGHSmGG~iA~~~a~~~~~p~--------~V~~lVlla~p~~ 166 (342)
T 2x5x_A 110 KYAIIKTFIDKVKAYTGKS-QVDIVAHSMGVSMSLATLQYYNNWT--------SVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHHHHHHHHHTCS-CEEEEEETHHHHHHHHHHHHHTCGG--------GEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHhCCC-CEEEEEECHHHHHHHHHHHHcCchh--------hhcEEEEECCCcc
Confidence 6778888888888888888 999999999999999999998 88 9999999998743
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-18 Score=147.76 Aligned_cols=108 Identities=21% Similarity=0.329 Sum_probs=88.4
Q ss_pred CCCCceEEEecCCCCCC-CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG-RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++|+|||+|||+++. ..|.. +++.|.+. .+|+|+++|+||||.|..+. ..++.+.+++++.++++.
T Consensus 66 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~-------~~~~VI~vD~~g~g~s~y~~---~~~~~~~v~~~la~ll~~ 135 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKGEESWLSTMCQNMFKV-------ESVNCICVDWKSGSRTAYSQ---ASQNVRIVGAEVAYLVGV 135 (449)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHHHH-------CCEEEEEEECHHHHSSCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCCCccHHHHHHHHHHhc-------CCeEEEEEeCCcccCCccHH---HHHHHHHHHHHHHHHHHH
Confidence 35688999999999985 57887 66776321 68999999999999986432 235677788888888876
Q ss_pred h------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 119 K------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 119 ~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+ +++ +++||||||||.+|+.+|.++|+ +|.++++++++..
T Consensus 136 L~~~~g~~~~-~v~LIGhSlGg~vA~~~a~~~p~--------~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 136 LQSSFDYSPS-NVHIIGHSLGSHAAGEAGRRTNG--------AVGRITGLDPAEP 181 (449)
T ss_dssp HHHHHCCCGG-GEEEEEETHHHHHHHHHHHHTTT--------CSSEEEEESCBCT
T ss_pred HHHhcCCCcc-cEEEEEECHhHHHHHHHHHhcch--------hcceeeccCcccc
Confidence 6 467 99999999999999999999999 9999999998753
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.74 E-value=7.7e-18 Score=137.74 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=90.5
Q ss_pred CCCceEEEecCCCCCCC-----ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGR-----NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
+++++|||+||++++.. .|..+.+.|.+ .||+|+++|+||+|.|. .+.+++++++.+++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~--------~G~~v~~~d~~g~g~s~--------~~~~~~~~~i~~~~ 68 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRR--------DGAQVYVTEVSQLDTSE--------VRGEQLLQQVEEIV 68 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHH--------TTCCEEEECCCSSSCHH--------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHh--------CCCEEEEEeCCCCCCch--------hhHHHHHHHHHHHH
Confidence 35889999999998754 89999999987 89999999999999864 46789999999999
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.++.+ ++++|||||||.+++.++.++|+ +|+++|+++++.
T Consensus 69 ~~~~~~-~v~lvGhS~GG~~a~~~a~~~p~--------~v~~lv~i~~p~ 109 (285)
T 1ex9_A 69 ALSGQP-KVNLIGHSHGGPTIRYVAAVRPD--------LIASATSVGAPH 109 (285)
T ss_dssp HHHCCS-CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESCCT
T ss_pred HHhCCC-CEEEEEECHhHHHHHHHHHhChh--------heeEEEEECCCC
Confidence 999988 99999999999999999999999 999999999853
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-16 Score=133.62 Aligned_cols=111 Identities=12% Similarity=-0.030 Sum_probs=72.5
Q ss_pred CCceEEEecCCCCCCCC------h--HHHHHHHH-hhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC-------CHH
Q 020518 43 YTSTAFVLHGLLGSGRN------W--RSFSRNLA-STLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH-------DIA 106 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~------~--~~~~~~l~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~-------~~~ 106 (325)
..|.|++.||......+ + ..+...|. + +||.|+++|+||+|.|..... ... ++.
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~--------~Gy~Vv~~D~rG~G~s~~~~~--~~~~~~~~~~~~~ 142 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNS--------AGYMTVMPDYLGLGDNELTLH--PYVQAETLASSSI 142 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTT--------TCCEEEEECCTTSTTCCCSSC--CTTCHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHh--------CCcEEEEeCCCCCCCCCCCCc--ccccchhHHHHHH
Confidence 46789999999853322 1 12334444 4 899999999999999986321 111 122
Q ss_pred HHHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 107 NAANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.++++..+++.+++ ..+++++||||||.+++.+|..+|+.... ..+.+.+..+++.
T Consensus 143 D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~---l~l~g~~~~~~p~ 201 (377)
T 4ezi_A 143 DMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPD---LPVSAVAPGSAPY 201 (377)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTT---SCCCEEEEESCCC
T ss_pred HHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCC---CceEEEEecCccc
Confidence 333444455555554 13899999999999999999988761110 1466777766653
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.73 E-value=5e-18 Score=122.37 Aligned_cols=94 Identities=16% Similarity=0.213 Sum_probs=80.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|...++ +++|||+| ++...|..+ |. ++|+|+++|+||||.|..+.. . +
T Consensus 10 ~g~~~~~~~~g~------~~~vv~~H---~~~~~~~~~---l~---------~~~~v~~~d~~G~G~s~~~~~---~--~ 63 (131)
T 2dst_A 10 YGLNLVFDRVGK------GPPVLLVA---EEASRWPEA---LP---------EGYAFYLLDLPGYGRTEGPRM---A--P 63 (131)
T ss_dssp TTEEEEEEEECC------SSEEEEES---SSGGGCCSC---CC---------TTSEEEEECCTTSTTCCCCCC---C--H
T ss_pred CCEEEEEEEcCC------CCeEEEEc---CCHHHHHHH---Hh---------CCcEEEEECCCCCCCCCCCCC---C--H
Confidence 567889988764 67899999 555666665 44 569999999999999988653 2 9
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+++++++.++++.++.+ +++++||||||.+++.+|.++|.
T Consensus 64 ~~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 64 EELAHFVAGFAVMMNLG-APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHHHHHTTCC-SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCC-ccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999999988 99999999999999999999875
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-17 Score=143.45 Aligned_cols=107 Identities=22% Similarity=0.347 Sum_probs=90.1
Q ss_pred CCCceEEEecCCCCCC-CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 42 PYTSTAFVLHGLLGSG-RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
+++++||++||++++. ..|.. +.+.|.+. .+|+|+++|+||+|.|..+. ...+.+.+++|+.++++.+
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~-------~~~~Vi~~D~~g~g~s~~~~---~~~~~~~~~~dl~~~i~~l 137 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQV-------EKVNCICVDWKGGSKAQYSQ---ASQNIRVVGAEVAYLVQVL 137 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHH-------CCEEEEEEECHHHHTSCHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhc-------CCcEEEEEECccccCccchh---hHhhHHHHHHHHHHHHHHH
Confidence 4689999999999998 67887 77877742 58999999999999987432 2456777888888888776
Q ss_pred ----C--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 120 ----G--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 120 ----~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+ .+ +++|+||||||.+|+.+|.++|+ +|++++++++...
T Consensus 138 ~~~~g~~~~-~i~lvGhSlGg~vA~~~a~~~p~--------~v~~iv~l~pa~p 182 (432)
T 1gpl_A 138 STSLNYAPE-NVHIIGHSLGAHTAGEAGKRLNG--------LVGRITGLDPAEP 182 (432)
T ss_dssp HHHHCCCGG-GEEEEEETHHHHHHHHHHHTTTT--------CSSEEEEESCBCT
T ss_pred HHhcCCCcc-cEEEEEeCHHHHHHHHHHHhccc--------ccceeEEeccccc
Confidence 4 56 99999999999999999999998 9999999998744
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-17 Score=142.61 Aligned_cols=107 Identities=21% Similarity=0.361 Sum_probs=86.5
Q ss_pred CCCCceEEEecCCCCCCC-ChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSGR-NWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~-~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++|+|||+|||+++.. .|.. +.+.|.+. .+|+||++|+||+|.|..+. ..++.+.+++++.++++.
T Consensus 67 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~-------~~~~VI~vD~~g~g~s~y~~---~~~~~~~~a~~l~~ll~~ 136 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKV-------EEVNCICVDWKKGSQTSYTQ---AANNVRVVGAQVAQMLSM 136 (450)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTT-------CCEEEEEEECHHHHSSCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCCCcchHHHHHHHHHhc-------CCeEEEEEeCccccCCcchH---HHHHHHHHHHHHHHHHHH
Confidence 356899999999998875 7876 56666531 47999999999999875332 345677888999999887
Q ss_pred h------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 119 K------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 119 ~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+ +++ +++||||||||.+|..+|.++|+ |.++++++++..
T Consensus 137 L~~~~g~~~~-~v~LVGhSlGg~vA~~~a~~~p~---------v~~iv~Ldpa~p 181 (450)
T 1rp1_A 137 LSANYSYSPS-QVQLIGHSLGAHVAGEAGSRTPG---------LGRITGLDPVEA 181 (450)
T ss_dssp HHHHHCCCGG-GEEEEEETHHHHHHHHHHHTSTT---------CCEEEEESCCCT
T ss_pred HHHhcCCChh-hEEEEEECHhHHHHHHHHHhcCC---------cccccccCcccc
Confidence 6 467 99999999999999999999874 899999998753
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.4e-16 Score=127.58 Aligned_cols=100 Identities=20% Similarity=0.252 Sum_probs=80.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
++++|+|+||++++...|..+...|. ++|+++|+|+ .. ...+++++++++.+.++.+...
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l~-----------~~v~~~~~~~----~~-----~~~~~~~~a~~~~~~i~~~~~~ 104 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRLS-----------IPTYGLQCTR----AA-----PLDSIHSLAAYYIDCIRQVQPE 104 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS-----------SCEEEECCCT----TS-----CTTCHHHHHHHHHHHHTTTCSS
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC-----------CCEEEEECCC----CC-----CcCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999998776543 5999999992 11 3568999999999999988753
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCC---cceEEEEecCCC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVAL---PKQLWVLDSVPG 167 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~---v~~lvli~~~~~ 167 (325)
++++++||||||.+|+++|.+.++. ... +++++++++.+.
T Consensus 105 ~~~~l~G~S~Gg~va~~~a~~l~~~-----g~~~p~v~~l~li~~~~~ 147 (316)
T 2px6_A 105 GPYRVAGYSYGACVAFEMCSQLQAQ-----QSPAPTHNSLFLFDGSPT 147 (316)
T ss_dssp CCCEEEEETHHHHHHHHHHHHHHHH-----C---CCCCEEEEESCSSC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHc-----CCcccccceEEEEcCCch
Confidence 3999999999999999999887530 015 899999998653
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-14 Score=118.57 Aligned_cols=119 Identities=12% Similarity=0.074 Sum_probs=84.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC--CCCCChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL--GSGRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGL 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~--~~~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~~~~ 99 (325)
.+..+.+. +-+.. .|+|||+||++ ++...|.. +...+.+ .++.|+++|.++.+ .+.....
T Consensus 21 ~~~~~~~~-~~P~~----~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~--------~~~~vv~pd~~~~~~~~~~~~~- 86 (280)
T 1r88_A 21 MGRDIPVA-FLAGG----PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAG--------KGISVVAPAGGAYSMYTNWEQD- 86 (280)
T ss_dssp TTEEEEEE-EECCS----SSEEEEECCSSCCSSSCHHHHTSCHHHHHTT--------SSSEEEEECCCTTSTTSBCSSC-
T ss_pred cCCcceEE-EeCCC----CCEEEEECCCCCCCChhhhhhcccHHHHHhc--------CCeEEEEECCCCCCccCCCCCC-
Confidence 35566666 44421 47999999995 46667765 3444554 78999999997642 2221111
Q ss_pred CCCCCH-HHHHHHHHHHHHH-hCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 100 DPPHDI-ANAANDLANLVKA-KGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 100 ~~~~~~-~~~~~~l~~~l~~-~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
....+ +.+++++..++++ ++++ .+++|+||||||.+|+.+|.++|+ ++++++++++...
T Consensus 87 -~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--------~~~~~v~~sg~~~ 148 (280)
T 1r88_A 87 -GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPD--------RFGFAGSMSGFLY 148 (280)
T ss_dssp -TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCCC
T ss_pred -CCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcc--------ceeEEEEECCccC
Confidence 11244 4467788999987 6653 289999999999999999999999 9999999988753
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=4e-14 Score=115.65 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=79.1
Q ss_pred ceEEEecCCC--CCCCChHHHH---HHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCC-----CCCCHHHH-HHHH
Q 020518 45 STAFVLHGLL--GSGRNWRSFS---RNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLD-----PPHDIANA-ANDL 112 (325)
Q Consensus 45 ~~vv~~HG~~--~~~~~~~~~~---~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~-----~~~~~~~~-~~~l 112 (325)
++|||+||++ ++...|.... ..+.+ .++.|+++|.+|. +.+....... ..++++++ ++++
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~--------~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l 101 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQ--------SGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREM 101 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTT--------SSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhc--------CCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHH
Confidence 5899999995 4777887643 33443 6899999998754 2222111000 13556654 5899
Q ss_pred HHHHHH-hCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 113 ANLVKA-KGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 113 ~~~l~~-~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..++++ ++++ .+++|+||||||.+|+.++.++|+ ++++++++++...
T Consensus 102 ~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--------~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 102 PAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQ--------QFPYAASLSGFLN 150 (280)
T ss_dssp HHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTT--------TCSEEEEESCCCC
T ss_pred HHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCc--------hheEEEEecCccc
Confidence 999987 6653 289999999999999999999999 9999999998754
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=128.90 Aligned_cols=108 Identities=20% Similarity=0.188 Sum_probs=84.1
Q ss_pred CceEEEecCCCCCCCChH---HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-------CCCCCCHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWR---SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-------LDPPHDIANAANDLA 113 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~l~ 113 (325)
+.||||+||..++...+. .+...+++.+ ++.|+++|+||||.|.+... .-...+.+++++|+.
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~-------~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~ 110 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEEL-------KAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFA 110 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHH-------TEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHH
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHh-------CCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHH
Confidence 557899999888765432 3455667653 57999999999999975321 012347899999999
Q ss_pred HHHHHhCCC------CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 114 NLVKAKGWD------WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 114 ~~l~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+++.+..+ .+++++||||||++|+.++.++|+ +|.++|+.+++.
T Consensus 111 ~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~--------~v~g~i~ssapv 161 (446)
T 3n2z_B 111 ELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPH--------MVVGALAASAPI 161 (446)
T ss_dssp HHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTT--------TCSEEEEETCCT
T ss_pred HHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhc--------cccEEEEeccch
Confidence 999887532 389999999999999999999999 999999877553
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=4.1e-14 Score=116.97 Aligned_cols=122 Identities=14% Similarity=0.080 Sum_probs=85.0
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCC--CCCCCChHHH---HHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCC-
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGL--LGSGRNWRSF---SRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGL- 99 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~--~~~~~~~~~~---~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~- 99 (325)
+..+.++ +.+.. ...|+|||+||+ +++...|... ...+.+ .++.|+++|.++. +.++.....
T Consensus 20 ~~~i~v~-~~p~~--~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~--------~~~~vv~p~~~~~~~~~~~~~~~~ 88 (304)
T 1sfr_A 20 GRDIKVQ-FQSGG--ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQ--------SGLSVVMPVGGQSSFYSDWYQPAC 88 (304)
T ss_dssp TEEEEEE-EECCS--TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTT--------SSCEEEEECCCTTCTTCBCSSCEE
T ss_pred CCceEEE-ECCCC--CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhc--------CCeEEEEECCCCCccccccCCccc
Confidence 4456655 33221 457899999999 5677778764 244443 6899999998764 222211100
Q ss_pred --C--CCCCHHHH-HHHHHHHHHH-hCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 100 --D--PPHDIANA-ANDLANLVKA-KGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 100 --~--~~~~~~~~-~~~l~~~l~~-~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
. ....++++ ++++..++++ ++++ .+++|+||||||.+|+.++.++|+ ++++++++++...
T Consensus 89 ~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~--------~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 89 GKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQ--------QFVYAGAMSGLLD 155 (304)
T ss_dssp ETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCSC
T ss_pred cccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCcc--------ceeEEEEECCccC
Confidence 0 03456665 4788888887 4432 289999999999999999999999 9999999988653
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-16 Score=134.90 Aligned_cols=123 Identities=13% Similarity=0.071 Sum_probs=87.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC--------------hH----HHHHHHHhhhhccCCCCceEEEEeC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN--------------WR----SFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~--------------~~----~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
.+|..+....+.+.......|+||++||++++... |. .++..|++ .||.|+++|
T Consensus 95 ~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~--------~G~~Vl~~D 166 (391)
T 3g8y_A 95 FPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVK--------EGYVAVAVD 166 (391)
T ss_dssp STTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHT--------TTCEEEECC
T ss_pred CCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHH--------CCCEEEEec
Confidence 35667777666554323457899999999886531 22 56778887 899999999
Q ss_pred CCCCCCCCCCCCCC--CCCCHHHHH---------------HHHHHHHHHhC------CCCCEEEEEeChhHHHHHHHHHH
Q 020518 87 LRNHGRSAEIEGLD--PPHDIANAA---------------NDLANLVKAKG------WDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 87 ~~G~G~S~~~~~~~--~~~~~~~~~---------------~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+||+|.|..+.... ..+....++ .|+.+.++.+. .+ ++.++||||||.+++.+|..
T Consensus 167 ~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~-rI~v~G~S~GG~~al~~a~~ 245 (391)
T 3g8y_A 167 NAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKD-RIVISGFSLGTEPMMVLGVL 245 (391)
T ss_dssp CTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEE-EEEEEEEGGGHHHHHHHHHH
T ss_pred CCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCC-eEEEEEEChhHHHHHHHHHc
Confidence 99999998653200 113444443 56666666552 34 78999999999999999886
Q ss_pred ccccccCCccCCcceEEEEecC
Q 020518 144 CARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 144 ~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+ +|+++|++++.
T Consensus 246 ~~---------~i~a~v~~~~~ 258 (391)
T 3g8y_A 246 DK---------DIYAFVYNDFL 258 (391)
T ss_dssp CT---------TCCEEEEESCB
T ss_pred CC---------ceeEEEEccCC
Confidence 54 69999988764
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-17 Score=141.01 Aligned_cols=109 Identities=14% Similarity=0.179 Sum_probs=81.7
Q ss_pred CCCCceEEEecCCCCC--------CCChH----HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC---------
Q 020518 41 RPYTSTAFVLHGLLGS--------GRNWR----SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL--------- 99 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~--------- 99 (325)
..++++|||+||++++ ...|. .+++.|.+ .||+|+++|+||||.|......
T Consensus 49 ~~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~--------~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~ 120 (431)
T 2hih_A 49 PKNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRK--------AGYETYEASVSALASNHERAVELYYYLKGGR 120 (431)
T ss_dssp CSCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHH--------TTCCEEEECCCSSSCHHHHHHHHHHHHHCEE
T ss_pred cCCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHh--------CCCEEEEEcCCCCCCCccchHHhhhhhhhcc
Confidence 3468899999999874 35674 58888886 8999999999999988532100
Q ss_pred -------CCCCCHHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHH--------------------------cc
Q 020518 100 -------DPPHDIANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQS--------------------------CA 145 (325)
Q Consensus 100 -------~~~~~~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~--------------------------~p 145 (325)
...++++++++++.+++++++. + +++||||||||.+++.+|.. +|
T Consensus 121 g~sg~~~~~~~~~~~~a~dl~~ll~~l~~~~-kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p 199 (431)
T 2hih_A 121 VDYGAAHSEKYGHERYGKTYEGVLKDWKPGH-PVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQD 199 (431)
T ss_dssp EECCHHHHHHHTCCSEEEEECCSCTTCBTTB-CEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCC
T ss_pred ccccccccccCCHHHHHHHHHHHHHHhCCCC-CEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcc
Confidence 0012334445556666777664 5 99999999999999999877 56
Q ss_pred ccccCCccCCcceEEEEecCC
Q 020518 146 RADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 146 ~~~~~~~~~~v~~lvli~~~~ 166 (325)
+ +|.++|+++++.
T Consensus 200 ~--------~V~slv~i~tP~ 212 (431)
T 2hih_A 200 N--------MVTSITTIATPH 212 (431)
T ss_dssp S--------CEEEEEEESCCT
T ss_pred c--------ceeEEEEECCCC
Confidence 6 999999999864
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.5e-14 Score=127.37 Aligned_cols=120 Identities=16% Similarity=-0.042 Sum_probs=89.8
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHH---H-HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSF---S-RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~---~-~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+.+|.+|.+..+.+.. ....|+||++||++.....+..+ . ..|++ .||.|+++|+||+|.|.....
T Consensus 16 ~~DG~~L~~~~~~P~~-~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~--------~Gy~vv~~D~RG~G~S~g~~~- 85 (587)
T 3i2k_A 16 MRDGVRLAVDLYRPDA-DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVR--------DGYAVVIQDTRGLFASEGEFV- 85 (587)
T ss_dssp CTTSCEEEEEEEEECC-SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHH--------TTCEEEEEECTTSTTCCSCCC-
T ss_pred CCCCCEEEEEEEECCC-CCCeeEEEEECCcCCCccccccchhhHHHHHHH--------CCCEEEEEcCCCCCCCCCccc-
Confidence 3578899988877642 23468899999998875433222 2 56666 899999999999999987543
Q ss_pred CCCCCHHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 100 DPPHDIANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
. +...++|+.++++.+. .+.++.++||||||.+++.+|.++|+ .++++|.+++.
T Consensus 86 -~---~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~--------~l~a~v~~~~~ 143 (587)
T 3i2k_A 86 -P---HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG--------GLKAIAPSMAS 143 (587)
T ss_dssp -T---TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT--------TEEEBCEESCC
T ss_pred -c---ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCC--------ccEEEEEeCCc
Confidence 1 2345566666655442 12389999999999999999999998 89999999876
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-13 Score=124.21 Aligned_cols=127 Identities=14% Similarity=0.034 Sum_probs=87.4
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCC-------CChHHH-H---HHHHhhhhccCCCCceEEEEeCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-------RNWRSF-S---RNLASTLSQTSASSEWRMVLVDLRNHGR 92 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-------~~~~~~-~---~~l~~~~~~~~~~~~~~vi~~D~~G~G~ 92 (325)
..+|.+|+...+.+... ...|.||++||++... ..|... . ..|++ +||.|+.+|+||+|.
T Consensus 32 ~~DG~~L~~~~~~P~~~-~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~--------~Gy~Vv~~D~RG~g~ 102 (615)
T 1mpx_A 32 MRDGVKLHTVIVLPKGA-KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVE--------GGYIRVFQDVRGKYG 102 (615)
T ss_dssp CTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHH--------TTCEEEEEECTTSTT
T ss_pred CCCCCEEEEEEEeCCCC-CCeeEEEEEcCCCCccccccccccccccccchhHHHHHh--------CCeEEEEECCCCCCC
Confidence 35788898888776432 3357888899998742 234332 2 56666 899999999999999
Q ss_pred CCCCCCCCCC----CCH--HHHHHHHHHHHH---Hh-C-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEE
Q 020518 93 SAEIEGLDPP----HDI--ANAANDLANLVK---AK-G-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161 (325)
Q Consensus 93 S~~~~~~~~~----~~~--~~~~~~l~~~l~---~~-~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvl 161 (325)
|......... +.. ...++|+.++++ +. . .+.++.++||||||.+++.+|.++|+ +++++|.
T Consensus 103 S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~--------~l~a~v~ 174 (615)
T 1mpx_A 103 SEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP--------ALKVAVP 174 (615)
T ss_dssp CCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT--------TEEEEEE
T ss_pred CCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCC--------ceEEEEe
Confidence 9875421000 010 023444444443 33 2 22389999999999999999998888 9999999
Q ss_pred EecCCC
Q 020518 162 LDSVPG 167 (325)
Q Consensus 162 i~~~~~ 167 (325)
+++...
T Consensus 175 ~~~~~d 180 (615)
T 1mpx_A 175 ESPMID 180 (615)
T ss_dssp ESCCCC
T ss_pred cCCccc
Confidence 998765
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=123.84 Aligned_cols=123 Identities=13% Similarity=0.067 Sum_probs=85.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC--------------hH----HHHHHHHhhhhccCCCCceEEEEeC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN--------------WR----SFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~--------------~~----~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
.+|.++....+.+.......|+||++||.+++... |. .++..|++ .||.|+++|
T Consensus 100 ~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~--------~Gy~Vl~~D 171 (398)
T 3nuz_A 100 LPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVK--------EGYIAVAVD 171 (398)
T ss_dssp STTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHT--------TTCEEEEEC
T ss_pred CCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHH--------CCCEEEEec
Confidence 35667777666554323456899999999886442 22 46777887 899999999
Q ss_pred CCCCCCCCCCCCCC-----------------CCCCHHHHHHHHHHHHHHhC------CCCCEEEEEeChhHHHHHHHHHH
Q 020518 87 LRNHGRSAEIEGLD-----------------PPHDIANAANDLANLVKAKG------WDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 87 ~~G~G~S~~~~~~~-----------------~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+||+|.|....... ........+.|+.+.++.+. .+ ++.++||||||.+++.+++.
T Consensus 172 ~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~-rI~v~G~S~GG~~a~~~aa~ 250 (398)
T 3nuz_A 172 NPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKD-RIVVSGFSLGTEPMMVLGTL 250 (398)
T ss_dssp CTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEE-EEEEEEEGGGHHHHHHHHHH
T ss_pred CCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEECHhHHHHHHHHhc
Confidence 99999987543100 00112223456666666653 24 78999999999999998887
Q ss_pred ccccccCCccCCcceEEEEecC
Q 020518 144 CARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 144 ~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+ +|+++|.++..
T Consensus 251 ~~---------~i~a~v~~~~~ 263 (398)
T 3nuz_A 251 DT---------SIYAFVYNDFL 263 (398)
T ss_dssp CT---------TCCEEEEESCB
T ss_pred CC---------cEEEEEEeccc
Confidence 65 68988887543
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=122.55 Aligned_cols=107 Identities=18% Similarity=0.234 Sum_probs=73.4
Q ss_pred CCCceEEEecCCCCCCC-------ChHH----HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGR-------NWRS----FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~-------~~~~----~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 110 (325)
+++++|||+||++++.. .|.. +.+.|.+ .||+|+++|+||+|.|... ..++.+
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~--------~G~~Via~Dl~g~G~s~~~--------a~~l~~ 67 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLND--------NGYRTYTLAVGPLSSNWDR--------ACEAYA 67 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHH--------TTCCEEEECCCSSBCHHHH--------HHHHHH
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHH--------CCCEEEEecCCCCCCcccc--------HHHHHH
Confidence 35789999999988653 4764 4488876 8999999999999976321 112222
Q ss_pred HHH------------------------HHHHH-hCCCCCEEEEEeChhHHHHHHHHHH-------------------ccc
Q 020518 111 DLA------------------------NLVKA-KGWDWPDVVIGHSMGGKVALHFAQS-------------------CAR 146 (325)
Q Consensus 111 ~l~------------------------~~l~~-~~~~~~~~lvGhS~Gg~~a~~~a~~-------------------~p~ 146 (325)
.+. +++++ .+.+ +++||||||||.++..++.+ +|.
T Consensus 68 ~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~-kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~ 146 (387)
T 2dsn_A 68 QLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGG-RIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPL 146 (387)
T ss_dssp HHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTC-CEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGG
T ss_pred HHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCC-ceEEEEECHHHHHHHHHHHHhccccccccccccccccccCcc
Confidence 222 11223 4667 99999999999999999983 240
Q ss_pred cccCCccCCcceEEEEecCCC
Q 020518 147 ADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 147 ~~~~~~~~~v~~lvli~~~~~ 167 (325)
......+|.++|+++++..
T Consensus 147 --~~g~~~~V~sLV~i~tP~~ 165 (387)
T 2dsn_A 147 --FEGGHHFVLSVTTIATPHD 165 (387)
T ss_dssp --GTCCCCCEEEEEEESCCTT
T ss_pred --ccccccceeEEEEECCCCC
Confidence 0000028999999998643
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=9.7e-13 Score=113.00 Aligned_cols=50 Identities=12% Similarity=-0.011 Sum_probs=41.9
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 255 PQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
+.++|+++++|.+|.+++++..+.+.+.+...+. +++++++++++|....
T Consensus 342 ~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~----~V~~~~y~~~~H~~~~ 391 (462)
T 3guu_A 342 VPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGA----NINFSPYPIAEHLTAE 391 (462)
T ss_dssp CCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC----EEEEEEESSCCHHHHH
T ss_pred CCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCC----CeEEEEECcCCccCch
Confidence 3458999999999999999988888887765443 3999999999998865
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-12 Score=118.47 Aligned_cols=128 Identities=13% Similarity=-0.015 Sum_probs=86.5
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCC--------CChHHH---H-HHHHhhhhccCCCCceEEEEeCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG--------RNWRSF---S-RNLASTLSQTSASSEWRMVLVDLRNHG 91 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~--------~~~~~~---~-~~l~~~~~~~~~~~~~~vi~~D~~G~G 91 (325)
..+|.+|....+.+... ...|+||++||++... ..|... . ..|++ +||.|+.+|+||+|
T Consensus 44 ~~DG~~L~~~l~~P~~~-~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~--------~GyaVv~~D~RG~g 114 (652)
T 2b9v_A 44 MRDGVKLYTVIVIPKNA-RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVE--------GGYIRVFQDIRGKY 114 (652)
T ss_dssp CTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHH--------TTCEEEEEECTTST
T ss_pred CCCCcEEEEEEEecCCC-CCccEEEEECCCCCCcccccccccccccccccchHHHHHh--------CCCEEEEEecCcCC
Confidence 35788888877766432 3357888899887641 123222 1 56666 89999999999999
Q ss_pred CCCCCCCCCCC----CCH--HHHHHHHHHHHH---Hh-CC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEE
Q 020518 92 RSAEIEGLDPP----HDI--ANAANDLANLVK---AK-GW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLW 160 (325)
Q Consensus 92 ~S~~~~~~~~~----~~~--~~~~~~l~~~l~---~~-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lv 160 (325)
.|......... +.- ...++|+.++++ +. .. +.++.++|||+||.+++.+|.++|+ +++++|
T Consensus 115 ~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~--------~lka~v 186 (652)
T 2b9v_A 115 GSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP--------ALKVAA 186 (652)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT--------TEEEEE
T ss_pred CCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCC--------ceEEEE
Confidence 99875421000 110 133444444443 33 21 2389999999999999999998888 999999
Q ss_pred EEecCCCC
Q 020518 161 VLDSVPGK 168 (325)
Q Consensus 161 li~~~~~~ 168 (325)
.+++....
T Consensus 187 ~~~~~~d~ 194 (652)
T 2b9v_A 187 PESPMVDG 194 (652)
T ss_dssp EEEECCCT
T ss_pred eccccccc
Confidence 99987553
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.4e-11 Score=99.80 Aligned_cols=119 Identities=10% Similarity=0.039 Sum_probs=81.9
Q ss_pred ceEEEEcccCCC--CCCCceEEEecCCCCCCCChH-------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSD--RPYTSTAFVLHGLLGSGRNWR-------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 29 ~l~y~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
.+.+..+.+..- ....|+||++||.+++...|. .+++.|.+. +.-.++.|+++|.+| .+...
T Consensus 52 ~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~ivv~pd~~~--~~~~~--- 122 (297)
T 1gkl_A 52 TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMN----GELEPLIVVTPTFNG--GNCTA--- 122 (297)
T ss_dssp EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHT----TSSCCEEEEECCSCS--TTCCT---
T ss_pred EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHc----CCCCCEEEEEecCcC--Cccch---
Confidence 566666665432 234578889999988766553 456666541 001259999999875 22211
Q ss_pred CCCCCHHHHHHHHHHHHHHh-CC------------C-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 100 DPPHDIANAANDLANLVKAK-GW------------D-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~-~~------------~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+ .+.+++++..++++. .. + .++.++|+||||.+++.++.++|+ ++++++.+++.
T Consensus 123 -~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~--------~f~~~v~~sg~ 192 (297)
T 1gkl_A 123 -QNF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLD--------YVAYFMPLSGD 192 (297)
T ss_dssp -TTH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTT--------TCCEEEEESCC
T ss_pred -HHH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCch--------hhheeeEeccc
Confidence 122 345678888888765 21 2 158999999999999999999999 99999999976
Q ss_pred C
Q 020518 166 P 166 (325)
Q Consensus 166 ~ 166 (325)
.
T Consensus 193 ~ 193 (297)
T 1gkl_A 193 Y 193 (297)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.3e-12 Score=112.55 Aligned_cols=122 Identities=12% Similarity=0.033 Sum_probs=90.4
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCC-ChH----------------------HHHHHHHhhhhccCCCCce
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NWR----------------------SFSRNLASTLSQTSASSEW 80 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~----------------------~~~~~l~~~~~~~~~~~~~ 80 (325)
..+|.+|+...+.+.. ....|+||+.||++.+.. .+. .....|++ +||
T Consensus 48 ~~DG~~L~a~l~~P~~-~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~--------~Gy 118 (560)
T 3iii_A 48 MRDGEKLYINIFRPNK-DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVP--------NDY 118 (560)
T ss_dssp CTTSCEEEEEEEECSS-SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGG--------GTC
T ss_pred CCCCcEEEEEEEecCC-CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHh--------CCC
Confidence 3588899988887643 244688999999988742 111 12456776 899
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CCCEEEEEeChhHHHHHHHHHHccccccCCccCCc
Q 020518 81 RMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW----DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 81 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
.|+++|.||+|.|..... .+ ....++|+.++++.+.. +.++.++|||+||.+++.+|++.|+ .+
T Consensus 119 ~vv~~D~RG~G~S~G~~~---~~-~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~--------~l 186 (560)
T 3iii_A 119 VVVKVALRGSDKSKGVLS---PW-SKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPP--------HL 186 (560)
T ss_dssp EEEEEECTTSTTCCSCBC---TT-SHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCT--------TE
T ss_pred EEEEEcCCCCCCCCCccc---cC-ChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCC--------ce
Confidence 999999999999987542 22 13556666666655421 2379999999999999999999998 89
Q ss_pred ceEEEEecCC
Q 020518 157 KQLWVLDSVP 166 (325)
Q Consensus 157 ~~lvli~~~~ 166 (325)
+++|..++..
T Consensus 187 ~aiv~~~~~~ 196 (560)
T 3iii_A 187 KAMIPWEGLN 196 (560)
T ss_dssp EEEEEESCCC
T ss_pred EEEEecCCcc
Confidence 9999988764
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.32 E-value=6e-12 Score=102.38 Aligned_cols=124 Identities=12% Similarity=0.085 Sum_probs=75.5
Q ss_pred cccceEEEEcccCCCC--CCCceEEEecCCCCC--CCChHHHHHHHHhhhhccCCCCc---eEEEEeCCCCCC-------
Q 020518 26 SLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGS--GRNWRSFSRNLASTLSQTSASSE---WRMVLVDLRNHG------- 91 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~~~~~~~~---~~vi~~D~~G~G------- 91 (325)
.+..+.+..+.+.... ..-|.|+++||.+.. ...|..+...+.+. .| +-|+++|.|+.+
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~-------~g~~~~ivV~i~~~~~~~~~~~~r 100 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEK-------TGVSPAIIVGVGYPIEGAFSGEER 100 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHH-------HCCCCCEEEEEECSCSSSCCHHHH
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchh-------cCCCCeEEEEECCCCCCcCccccc
Confidence 4667888877765432 234789999998631 11122222222111 34 899999998731
Q ss_pred ---CCCCCC------CC-----CCCC---CHHH-HHHHHHHHHHHh-CC--CCCEEEEEeChhHHHHHHHHHHccccccC
Q 020518 92 ---RSAEIE------GL-----DPPH---DIAN-AANDLANLVKAK-GW--DWPDVVIGHSMGGKVALHFAQSCARADYG 150 (325)
Q Consensus 92 ---~S~~~~------~~-----~~~~---~~~~-~~~~l~~~l~~~-~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~ 150 (325)
.+.... .. .... .+.+ +.+++..++++. .. + ++.++||||||.+++.++.++|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~-~~~~~G~S~GG~~a~~~~~~~p~---- 175 (275)
T 2qm0_A 101 CYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKG-KQTLFGHXLGGLFALHILFTNLN---- 175 (275)
T ss_dssp HHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEE-EEEEEEETHHHHHHHHHHHHCGG----
T ss_pred ccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCC-CCEEEEecchhHHHHHHHHhCch----
Confidence 111100 00 0011 2223 235566666553 33 5 89999999999999999999999
Q ss_pred CccCCcceEEEEecC
Q 020518 151 QFVALPKQLWVLDSV 165 (325)
Q Consensus 151 ~~~~~v~~lvli~~~ 165 (325)
.+++++++++.
T Consensus 176 ----~f~~~~~~s~~ 186 (275)
T 2qm0_A 176 ----AFQNYFISSPS 186 (275)
T ss_dssp ----GCSEEEEESCC
T ss_pred ----hhceeEEeCce
Confidence 99999998865
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-11 Score=105.11 Aligned_cols=119 Identities=19% Similarity=0.106 Sum_probs=76.7
Q ss_pred cceEEEEcccCCC-CCCCceEEEecCCCCC-CCChHHHHHHHHhhhhccCCCCce----EEEEeCCCCCC-CCCCCCCCC
Q 020518 28 QTLAYEEVRSSSD-RPYTSTAFVLHGLLGS-GRNWRSFSRNLASTLSQTSASSEW----RMVLVDLRNHG-RSAEIEGLD 100 (325)
Q Consensus 28 ~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~-~~~~~~~~~~l~~~~~~~~~~~~~----~vi~~D~~G~G-~S~~~~~~~ 100 (325)
....+..+.+... ....|+|+++||.+.. ...+..++..|.+ +|+ .|+++|.+|++ ++....
T Consensus 180 ~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~--------~g~~~p~iVV~~d~~~~~~r~~~~~--- 248 (403)
T 3c8d_A 180 NSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTH--------RQQLPPAVYVLIDAIDTTHRAHELP--- 248 (403)
T ss_dssp EEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHH--------TTSSCSCEEEEECCCSHHHHHHHSS---
T ss_pred CcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcCcHHHHHHHHHH--------cCCCCCeEEEEECCCCCccccccCC---
Confidence 3455555544321 2356899999995431 1223446677765 454 59999998742 221111
Q ss_pred CCCC-HHHHHHHHHHHHHHh-C----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 101 PPHD-IANAANDLANLVKAK-G----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 101 ~~~~-~~~~~~~l~~~l~~~-~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.... .+.+++++..++++. . .+ +++|+||||||.+++.++.++|+ ++++++++++..
T Consensus 249 ~~~~~~~~l~~el~~~i~~~~~~~~d~~-~~~l~G~S~GG~~al~~a~~~p~--------~f~~~~~~sg~~ 311 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVKVIAPFSDRAD-RTVVAGQSFGGLSALYAGLHWPE--------RFGCVLSQSGSY 311 (403)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGG-GCEEEEETHHHHHHHHHHHHCTT--------TCCEEEEESCCT
T ss_pred ChHHHHHHHHHHHHHHHHHHCCCCCCCC-ceEEEEECHHHHHHHHHHHhCch--------hhcEEEEecccc
Confidence 1112 233456777777764 2 24 79999999999999999999999 999999998764
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.97 E-value=4.5e-08 Score=85.06 Aligned_cols=138 Identities=12% Similarity=0.036 Sum_probs=87.1
Q ss_pred ccceEEEEcccC--CCCCCCceEEEecCCCCCCCChHHHHHHHHhhh---------hccCCCCceEEEEeCC-CCCCCCC
Q 020518 27 LQTLAYEEVRSS--SDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL---------SQTSASSEWRMVLVDL-RNHGRSA 94 (325)
Q Consensus 27 ~~~l~y~~~~~~--~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~vi~~D~-~G~G~S~ 94 (325)
+..+.|.-+... ....++|.+++++|.++++..|..+ .++.... ...+-++...++.+|. .|.|.|.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~-~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy 126 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGAL-VESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSV 126 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHH-HSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhH-hhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccC
Confidence 567888776543 2335689999999999988766322 2111100 0001124468999996 6999997
Q ss_pred CCCCCC-------CCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC----CccCCc
Q 020518 95 EIEGLD-------PPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG----QFVALP 156 (325)
Q Consensus 95 ~~~~~~-------~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~----~~~~~v 156 (325)
...... ...+.++.++++..+|+.. ... +++|.|+|+||..+-.+|...-++... .....+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~-~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inL 205 (483)
T 1ac5_A 127 EQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTR-KIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGS-EEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred CcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCC-CEEEEeccccccccHHHHHHHHHhcccccccCcccce
Confidence 643210 1236788888888877763 334 899999999999998888653221100 011257
Q ss_pred ceEEEEecCC
Q 020518 157 KQLWVLDSVP 166 (325)
Q Consensus 157 ~~lvli~~~~ 166 (325)
+++.+-++..
T Consensus 206 kGi~IGNg~~ 215 (483)
T 1ac5_A 206 KALLIGNGWI 215 (483)
T ss_dssp EEEEEEEECC
T ss_pred eeeEecCCcc
Confidence 8888777654
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.4e-08 Score=80.52 Aligned_cols=52 Identities=17% Similarity=0.164 Sum_probs=41.7
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 311 (325)
.|+++++|++|.+++++..+.+.+.+...+. ..+++++.++++||....+.+
T Consensus 91 ~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~--~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 91 RKIYMWTGSSDTTVGPNVMNQLKAQLGNFDN--SANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp CEEEEEEETTCCSSCHHHHHHHHHHHTTTSC--GGGEEEEEETTCCSSEEESSC
T ss_pred CcEEEEeCCCCCCcCHHHHHHHHHHHHhcCC--CcceEEEEeCCCCCCCccCCc
Confidence 5899999999999999999888887765431 013899999999998766543
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.5e-08 Score=82.29 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.8
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
++.++||||||.+++.++.+ |+ .+++++++++.
T Consensus 142 r~~i~G~S~GG~~a~~~~~~-p~--------~f~~~~~~s~~ 174 (278)
T 2gzs_A 142 RRGLWGHSYGGLFVLDSWLS-SS--------YFRSYYSASPS 174 (278)
T ss_dssp EEEEEEETHHHHHHHHHHHH-CS--------SCSEEEEESGG
T ss_pred ceEEEEECHHHHHHHHHHhC-cc--------ccCeEEEeCcc
Confidence 68999999999999999999 99 99999998875
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.4e-09 Score=103.17 Aligned_cols=94 Identities=18% Similarity=0.288 Sum_probs=68.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
..++++|+|+.++....|..+.. .+ ..+.|++++.+ +.+++++.+.+.+..+..+
T Consensus 1057 ~~~~L~~l~~~~g~~~~y~~la~----~L------~~~~v~~l~~~---------------~~~~~~~~~~~~i~~~~~~ 1111 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMYQNLSS----RL------PSYKLCAFDFI---------------EEEDRLDRYADLIQKLQPE 1111 (1304)
T ss_dssp SCCEEECCCCTTCBGGGGHHHHT----TC------CSCEEEECBCC---------------CSTTHHHHHHHHHHHHCCS
T ss_pred cCCcceeecccccchHHHHHHHh----cc------cccceEeeccc---------------CHHHHHHHHHHHHHHhCCC
Confidence 36789999999998888865543 32 35788888762 2234555666677777665
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++.++|||+||.+|.++|.+..+ ....+..++++++.+
T Consensus 1112 gp~~l~G~S~Gg~lA~e~A~~L~~-----~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1112 GPLTLFGYSAGCSLAFEAAKKLEE-----QGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp SCEEEEEETTHHHHHHHHHHHHHH-----SSCCEEEEEEESCCE
T ss_pred CCeEEEEecCCchHHHHHHHHHHh-----CCCceeEEEEecCcc
Confidence 599999999999999999987654 112588999999764
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.9e-07 Score=75.60 Aligned_cols=136 Identities=15% Similarity=0.130 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 108 AANDLANLVKAKG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 108 ~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
+.+++..++++.. .+....++||||||..++.++.++|+ .+.+++.+++....... .
T Consensus 121 l~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~--------~F~~~~~~S~~~w~~~~--------~------ 178 (331)
T 3gff_A 121 IEKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRP--------LFSAYLALDTSLWFDSP--------H------ 178 (331)
T ss_dssp HHHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCS--------SCSEEEEESCCTTTTTT--------H------
T ss_pred HHHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCch--------hhheeeEeCchhcCChH--------H------
Confidence 3455566666542 22134799999999999999999999 99999999876321100 0
Q ss_pred cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 187 SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
+... ...++.. .. ..+.|+++.+|+
T Consensus 179 -----------~~~~---------~~~~~~~----------------------------------~~-~~~~~l~l~~G~ 203 (331)
T 3gff_A 179 -----------YLTL---------LEERVVK----------------------------------GD-FKQKQLFMAIAN 203 (331)
T ss_dssp -----------HHHH---------HHHHHHH----------------------------------CC-CSSEEEEEEECC
T ss_pred -----------HHHH---------HHHHhhc----------------------------------cc-CCCCeEEEEeCC
Confidence 0000 0000000 00 012688999999
Q ss_pred CCC-------CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 267 KSD-------RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 267 ~D~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.|. .++.+....+.+.+...... .-++++.++|+.+|.... +..+.+.+..++.
T Consensus 204 ~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~-g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~ 264 (331)
T 3gff_A 204 NPLSPGFGVSSYHKDLNLAFADKLTKLAPK-GLGFMAKYYPEETHQSVS--HIGLYDGIRHLFK 264 (331)
T ss_dssp CSEETTTEECCHHHHHHHHHHHHHHHHCCT-TEEEEEEECTTCCTTTHH--HHHHHHHHHHHHG
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHhccCC-CceEEEEECCCCCccccH--HHHHHHHHHHHHh
Confidence 987 34455556666666553210 013889999999998665 5666666655543
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4.6e-08 Score=85.71 Aligned_cols=108 Identities=17% Similarity=0.118 Sum_probs=68.7
Q ss_pred CCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCC-CCCCCCCHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIE-GLDPPHDIANAANDLAN 114 (325)
Q Consensus 43 ~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~-~~~~~~~~~~~~~~l~~ 114 (325)
..|.||++||.+ ++...+......|++. .++.|+.+|+| |++.+.... .......+.+....+.-
T Consensus 96 ~~PviV~iHGGg~~~g~~~~~~~~~~~la~~-------g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~w 168 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQ-------GEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKW 168 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGGCCHHHHHH-------HTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccccCCCCCcccCHHHHHhc-------CCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHH
Confidence 368999999965 4444433334556652 34999999999 666553321 00023334454443333
Q ss_pred HHHH---h--CCCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCC
Q 020518 115 LVKA---K--GWDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 115 ~l~~---~--~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+. . +.+ +++|+|||+||.+++.++... ++ +++++|+.++..
T Consensus 169 v~~~i~~fggDp~-~V~l~G~SaGg~~~~~~~~~~~~~~--------lf~~~i~~sg~~ 218 (489)
T 1qe3_A 169 VRENISAFGGDPD-NVTVFGESAGGMSIAALLAMPAAKG--------LFQKAIMESGAS 218 (489)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHTTCGGGTT--------SCSEEEEESCCC
T ss_pred HHHHHHHhCCCcc-eeEEEEechHHHHHHHHHhCccccc--------hHHHHHHhCCCC
Confidence 3222 2 345 799999999999998887654 33 799999998865
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.69 E-value=4.4e-08 Score=86.06 Aligned_cols=112 Identities=16% Similarity=0.102 Sum_probs=73.6
Q ss_pred CCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCC----CCCCCCHHHHHH
Q 020518 42 PYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEG----LDPPHDIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~----~~~~~~~~~~~~ 110 (325)
...|+||++||.+ ++...+......|++. .++.|+++|+| |++.+..... ......+.|...
T Consensus 97 ~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~-------~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~ 169 (498)
T 2ogt_A 97 KKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKH-------GDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVA 169 (498)
T ss_dssp CCEEEEEEECCSTTTSCCTTCGGGCCHHHHHH-------HTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHH
T ss_pred CCCcEEEEEcCCccCCCCCCCCcCCHHHHHhC-------CCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHH
Confidence 4568999999987 5555443345566652 24999999999 8887755321 001223445544
Q ss_pred HHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 111 DLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 111 ~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+.-+.+. .+ .+ +++|+|+|.||.+++.++..... ...++++|+.++...
T Consensus 170 al~wv~~~i~~fggdp~-~V~l~G~SaGg~~~~~~~~~~~~------~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 170 ALRWVKENIAAFGGDPD-NITIFGESAGAASVGVLLSLPEA------SGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHCGGG------TTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHhCCCCC-eEEEEEECHHHHHHHHHHhcccc------cchhheeeeccCCcc
Confidence 44433333 33 45 79999999999999888875422 127999999998643
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-06 Score=71.10 Aligned_cols=125 Identities=15% Similarity=0.094 Sum_probs=72.5
Q ss_pred ccceEEEEcccCC-------CCCCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCCCC------
Q 020518 27 LQTLAYEEVRSSS-------DRPYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRNHG------ 91 (325)
Q Consensus 27 ~~~l~y~~~~~~~-------~~~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G------ 91 (325)
+..+.+..+-|+. ....-|+|.++||++++...|... +..+++. .+..++.+|..-.+
T Consensus 25 ~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~-------~~~~~v~p~~~p~~~~~~~~ 97 (299)
T 4fol_A 25 KTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADK-------YGFAIVFPDTSPRGDEVAND 97 (299)
T ss_dssp SSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHH-------HTCEEEEECSSCCSTTSCCC
T ss_pred CCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHH-------cCchhhccCCCcceeecCCC
Confidence 4556666665532 112348899999999999888653 2233322 45678887642111
Q ss_pred ----------CCCCCCCC----CCCCCH-HHHHHHHHHHHHHh-C---------CCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 92 ----------RSAEIEGL----DPPHDI-ANAANDLANLVKAK-G---------WDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 92 ----------~S~~~~~~----~~~~~~-~~~~~~l~~~l~~~-~---------~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
.+...... ...+.+ +.++++|..++++. . .+ +..|.||||||.-|+.+|.++|+
T Consensus 98 ~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~-~~~i~G~SMGG~gAl~~al~~~~ 176 (299)
T 4fol_A 98 PEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLD-NVAITGISMGGYGAICGYLKGYS 176 (299)
T ss_dssp TTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSS-SEEEEEBTHHHHHHHHHHHHTGG
T ss_pred cccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhccccccccccccc-ceEEEecCchHHHHHHHHHhCCC
Confidence 11000000 011222 34677888888653 1 13 68999999999999999999754
Q ss_pred cccCCccCCcceEEEEecC
Q 020518 147 ADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 147 ~~~~~~~~~v~~lvli~~~ 165 (325)
..+..++...++.
T Consensus 177 ------~~~~~~~~s~s~~ 189 (299)
T 4fol_A 177 ------GKRYKSCSAFAPI 189 (299)
T ss_dssp ------GTCCSEEEEESCC
T ss_pred ------CCceEEEEecccc
Confidence 0155555555443
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2e-07 Score=73.24 Aligned_cols=138 Identities=16% Similarity=0.081 Sum_probs=91.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh----------hccCCCCceEEEEeCC-CCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL----------SQTSASSEWRMVLVDL-RNHGRSA 94 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~vi~~D~-~G~G~S~ 94 (325)
.+..|.|.-+.......++|.+++++|.++++..+..++.++.... ...+-++...++.+|. .|.|.|.
T Consensus 30 ~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy 109 (255)
T 1whs_A 30 AGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSY 109 (255)
T ss_dssp TTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCE
T ss_pred CCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCC
Confidence 4668888877664444678999999999998888722222111000 0011124568999996 5999996
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 95 EIEGLDP-PHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 95 ~~~~~~~-~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
....... ..+.++.++|+..+|+.. ... +++|.|+|+||..+-.+|...-++. .....++++++.++..
T Consensus 110 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~-~~yi~GESYgG~yvp~la~~i~~~n--~~~inLkGi~ign~~~ 186 (255)
T 1whs_A 110 TNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYR-DFYIAGESYAGHYVPELSQLVHRSK--NPVINLKGFMVGNGLI 186 (255)
T ss_dssp ESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTC-EEEEEEEETHHHHHHHHHHHHHHHT--CSSCEEEEEEEEEECC
T ss_pred CcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCC-CEEEEecCCccccHHHHHHHHHHcC--CcccccceEEecCCcc
Confidence 5542111 357788888888887642 335 8999999999999988887643311 0112679999999874
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=6e-06 Score=70.28 Aligned_cols=134 Identities=16% Similarity=0.058 Sum_probs=86.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhh---------hhccCCCCceEEEEeC-CCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLAST---------LSQTSASSEWRMVLVD-LRNHGRSAE 95 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~vi~~D-~~G~G~S~~ 95 (325)
.+..+.|.-+.......++|.+++++|.++++..+..+ .++... ....+-++-..++.+| ..|.|.|..
T Consensus 26 ~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~-~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~ 104 (421)
T 1cpy_A 26 EDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLF-FALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYS 104 (421)
T ss_dssp TTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHT-TTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEE
T ss_pred CCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHH-HccCCcEECCCCceeECCcccccccCEEEecCCCcccccCC
Confidence 46788887776654556789999999999988765221 111110 0000112345899999 569999976
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh-------CC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 96 IEGLDPPHDIANAANDLANLVKAK-------GW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~-------~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
... ...+.++.++|+..+|+.. .. . +++|.|.|+||..+-.+|...-++.. ....++++.+-++.
T Consensus 105 ~~~--~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~-~~yi~GESY~G~y~p~~a~~i~~~n~--~~inLkGi~IGNg~ 178 (421)
T 1cpy_A 105 GSS--GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQ-DFHIAGASYAGHYIPVFASEILSHKD--RNFNLTSVLIGNGL 178 (421)
T ss_dssp SSC--CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTC-CEEEEEETTHHHHHHHHHHHHTTCSS--CSSCCCEEEEESCC
T ss_pred CCC--CCCChHHHHHHHHHHHHHHHHhCHHhcccCC-CEEEEeecccccccHHHHHHHHhccc--cccceeeEEecCcc
Confidence 543 2455667778877777543 22 4 89999999999999888876543211 11357888776654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.59 E-value=2.9e-07 Score=79.32 Aligned_cols=134 Identities=14% Similarity=0.035 Sum_probs=83.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh----------hccCCCCceEEEEeCC-CCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL----------SQTSASSEWRMVLVDL-RNHGRSA 94 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~vi~~D~-~G~G~S~ 94 (325)
++..+.|.-+.......++|.||++||.++++..+..+ .++.... ...+-++..+++.+|. +|.|.|.
T Consensus 30 ~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~-~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~ 108 (452)
T 1ivy_A 30 GSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLL-TEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSY 108 (452)
T ss_dssp TTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHH-TTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCE
T ss_pred CCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHH-HhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCC
Confidence 46788888776544445689999999999988765322 2110000 0001124578999995 7999997
Q ss_pred CCCCCCCCCCHHHHHHHH----HHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 95 EIEGLDPPHDIANAANDL----ANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l----~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
..... ...+-++.++|+ ..+++. +... +++|.|+|+||..+-.+|...-+. ....++++++.++..
T Consensus 109 ~~~~~-~~~~~~~~a~~~~~~l~~f~~~~p~~~~~-~~~i~GeSYgG~y~p~la~~i~~~----~~~~l~g~~ign~~~ 181 (452)
T 1ivy_A 109 SDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNN-KLFLTGESYAGIYIPTLAVLVMQD----PSMNLQGLAVGNGLS 181 (452)
T ss_dssp ESSCC-CCCBHHHHHHHHHHHHHHHHHHSGGGTTS-CEEEEEETTHHHHHHHHHHHHTTC----TTSCEEEEEEESCCS
T ss_pred cCCCC-CcCCcHHHHHHHHHHHHHHHHhcHHhcCC-CEEEEeeccceeehHHHHHHHHhc----CccccceEEecCCcc
Confidence 44320 222334455554 444444 2345 999999999999777766553210 012789999998764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1e-08 Score=105.14 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=0.0
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.+++++|+|+.+++...|..+...|. ..|+.+..|| .. ...+++++++++.+.+.....+
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l~-----------~~v~~lq~pg----~~-----~~~~i~~la~~~~~~i~~~~p~ 2300 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKLS-----------IPTYGLQCTG----AA-----PLDSIQSLASYYIECIRQVQPE 2300 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhhC-----------CcEEEEecCC----CC-----CCCCHHHHHHHHHHHHHHhCCC
Confidence 35789999999999988888776654 3888888887 11 3457888999888888877654
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcc---eEEEEecC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK---QLWVLDSV 165 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~---~lvli~~~ 165 (325)
+++.++||||||.+|+++|.+-... ...+. .++++++.
T Consensus 2301 gpy~L~G~S~Gg~lA~evA~~L~~~-----G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2301 GPYRIAGYSYGACVAFEMCSQLQAQ-----QSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ----------------------------------------------
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHc-----CCCCCccceEEEEeCc
Confidence 5999999999999999999765430 01344 78888864
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.47 E-value=1.4e-06 Score=77.15 Aligned_cols=111 Identities=13% Similarity=-0.053 Sum_probs=68.6
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~l~~ 114 (325)
...|+||++||.+. +..........|++. .|+-|+++++| |++.+...........+.|....+.-
T Consensus 105 ~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~-------~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~w 177 (529)
T 1p0i_A 105 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARV-------ERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQW 177 (529)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHH-------HCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCccccChHHHhcc-------CCeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHH
Confidence 45689999999653 333321223445532 58999999999 55544211111123345555444433
Q ss_pred HHH---HhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 115 LVK---AKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 115 ~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+ ..+ .+ +++|+|+|.||..+..++..... ...++++|+.++..
T Consensus 178 v~~~i~~fggdp~-~vti~G~SaGg~~~~~~~~~~~~------~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 178 VQKNIAAFGGNPK-SVTLFGESAGAASVSLHLLSPGS------HSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHCGGG------GGGCSEEEEESCCT
T ss_pred HHHHHHHhCCChh-heEEeeccccHHHHHHHHhCccc------hHHHHHHHHhcCcc
Confidence 333 333 34 79999999999999988876421 12799999999864
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.46 E-value=1.3e-06 Score=77.57 Aligned_cols=107 Identities=14% Similarity=-0.037 Sum_probs=66.7
Q ss_pred CceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
.|+||++||.+. +..........|++. .|+.|+.+++| |++.+...........+.|....+.-+.
T Consensus 112 ~Pviv~iHGGg~~~g~~~~~~~~~~~la~~-------~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~ 184 (543)
T 2ha2_A 112 TPVLIWIYGGGFYSGAASLDVYDGRFLAQV-------EGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQ 184 (543)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTHHHHHH-------HCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCccccCCCCCCcCChHHHHhc-------CCEEEEEecccccccccccCCCCCCCCCcccHHHHHHHHHHHH
Confidence 489999999763 332222223445532 58999999999 4554421111112334555554443333
Q ss_pred HH---hC--CCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCC
Q 020518 117 KA---KG--WDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+. .+ .+ +++|+|+|.||..++.++... +. .++++|+.++..
T Consensus 185 ~~i~~fggDp~-~v~i~G~SaGg~~~~~~~~~~~~~~--------lf~~~i~~sg~~ 232 (543)
T 2ha2_A 185 ENIAAFGGDPM-SVTLFGESAGAASVGMHILSLPSRS--------LFHRAVLQSGTP 232 (543)
T ss_dssp HHGGGGTEEEE-EEEEEEETHHHHHHHHHHHSHHHHT--------TCSEEEEESCCS
T ss_pred HHHHHhCCChh-heEEEeechHHHHHHHHHhCcccHH--------hHhhheeccCCc
Confidence 33 33 35 899999999999998877653 33 799999999854
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.39 E-value=2.4e-06 Score=75.78 Aligned_cols=112 Identities=16% Similarity=0.008 Sum_probs=68.8
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~l~~ 114 (325)
...|+||++||.+. +..........|+.. .|+-|+++++| |+..+...........+.|....+.-
T Consensus 107 ~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~-------~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~w 179 (537)
T 1ea5_A 107 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYT-------EEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQW 179 (537)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHH-------HTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCCCccChHHHHhc-------CCEEEEEeccCccccccccCCCCCCCcCccccHHHHHHHHH
Confidence 45689999999643 333321223445522 68999999999 45444211111123445555554433
Q ss_pred HHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 115 LVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 115 ~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+. .+ .+ +++|+|+|.||..+..++..... ...++++|+.++...
T Consensus 180 v~~ni~~fggdp~-~vtl~G~SaGg~~~~~~~~~~~~------~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 180 VHDNIQFFGGDPK-TVTIFGESAGGASVGMHILSPGS------RDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHCHHH------HTTCSEEEEESCCTT
T ss_pred HHHHHHHhCCCcc-ceEEEecccHHHHHHHHHhCccc------hhhhhhheeccCCcc
Confidence 3333 33 45 89999999999999888765311 017999999998643
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=5.1e-05 Score=63.52 Aligned_cols=36 Identities=19% Similarity=-0.084 Sum_probs=31.2
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+.+ ++.++|||+||..++.+++..+ ||+.+|..++.
T Consensus 217 D~~-RIgv~G~S~gG~~Al~aaA~D~---------Ri~~vi~~~sg 252 (433)
T 4g4g_A 217 DTK-RLGVTGCSRNGKGAFITGALVD---------RIALTIPQESG 252 (433)
T ss_dssp EEE-EEEEEEETHHHHHHHHHHHHCT---------TCSEEEEESCC
T ss_pred Chh-HEEEEEeCCCcHHHHHHHhcCC---------ceEEEEEecCC
Confidence 345 8999999999999999999876 79999988754
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.30 E-value=3.9e-05 Score=63.38 Aligned_cols=78 Identities=15% Similarity=0.038 Sum_probs=49.5
Q ss_pred CceEEEEeCC-----------CCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHh--------CCCCCEEEEEeChhHHHH
Q 020518 78 SEWRMVLVDL-----------RNHGRSAEI-EGLDPPHDIANAANDLANLVKAK--------GWDWPDVVIGHSMGGKVA 137 (325)
Q Consensus 78 ~~~~vi~~D~-----------~G~G~S~~~-~~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~lvGhS~Gg~~a 137 (325)
+||.++.++. +|+|.-... ......-.+..++=++...++.+ +.+ ++.++|||+||..|
T Consensus 121 ~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~-RIgv~G~S~gG~~a 199 (375)
T 3pic_A 121 AGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTT-KIGVTGCSRNGKGA 199 (375)
T ss_dssp TTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEE-EEEEEEETHHHHHH
T ss_pred CCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChh-hEEEEEeCCccHHH
Confidence 7999999875 244321100 00002233444444455555443 224 89999999999999
Q ss_pred HHHHHHccccccCCccCCcceEEEEecC
Q 020518 138 LHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 138 ~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+.+++..+ ||+.+|..++.
T Consensus 200 l~~aA~D~---------Ri~~~v~~~~g 218 (375)
T 3pic_A 200 MVAGAFEK---------RIVLTLPQESG 218 (375)
T ss_dssp HHHHHHCT---------TEEEEEEESCC
T ss_pred HHHHhcCC---------ceEEEEeccCC
Confidence 99999876 79998887754
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=4.5e-06 Score=74.13 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=67.8
Q ss_pred CCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~l~~ 114 (325)
...|+||++||.+ ++...|... .|+.. .|+.|+.+|+| |++.+..... .....+.|....+.-
T Consensus 113 ~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~-------~g~vvv~~nYRlg~~gf~~~~~~~~-~~n~gl~D~~~al~w 182 (542)
T 2h7c_A 113 NRLPVMVWIHGGGLMVGAASTYDGL--ALAAH-------ENVVVVTIQYRLGIWGFFSTGDEHS-RGNWGHLDQVAALRW 182 (542)
T ss_dssp CCEEEEEEECCSTTTSCCSTTSCCH--HHHHH-------HTCEEEEECCCCHHHHHCCCSSTTC-CCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCccccCHH--HHHhc-------CCEEEEecCCCCccccCCCCCcccC-ccchhHHHHHHHHHH
Confidence 3568999999964 333334332 24432 58999999999 5554432211 023344554444333
Q ss_pred HHH---HhC--CCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCC
Q 020518 115 LVK---AKG--WDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 115 ~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+ ..+ .+ +++|+|+|.||..+..++... +. .++++|+.++...
T Consensus 183 v~~ni~~fggDp~-~Vtl~G~SaGg~~~~~~~~~~~~~~--------lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 183 VQDNIASFGGNPG-SVTIFGESAGGESVSVLVLSPLAKN--------LFHRAISESGVAL 233 (542)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHCGGGTT--------SCSEEEEESCCTT
T ss_pred HHHHHHHcCCCcc-ceEEEEechHHHHHHHHHhhhhhhH--------HHHHHhhhcCCcc
Confidence 323 233 35 899999999999999888763 33 8999999987643
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.21 E-value=1e-06 Score=78.32 Aligned_cols=105 Identities=14% Similarity=0.062 Sum_probs=66.4
Q ss_pred CceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN----HGRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
.|+||++||.+. +..........|++ .|+.|+++|+|. +..+..... .....+.|....+.-+.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~--------~g~vvv~~nYRl~~~Gf~~~~~~~~-~~n~gl~D~~~al~wv~ 185 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVS--------KDVIVITFNYRLNVYGFLSLNSTSV-PGNAGLRDMVTLLKWVQ 185 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGG--------GSCEEEEECCCCHHHHHCCCSSSSC-CSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHh--------CCeEEEEeCCcCCccccccCcccCC-CCchhHHHHHHHHHHHH
Confidence 688999999542 22221122334554 799999999994 333322110 02344555555543333
Q ss_pred HH---hC--CCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCC
Q 020518 117 KA---KG--WDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+. .+ .+ +++|+|+|.||.+++.++... +. .++++|+.++..
T Consensus 186 ~~i~~fggDp~-~v~l~G~SaGg~~~~~~~~~~~~~~--------lf~~~i~~sg~~ 233 (551)
T 2fj0_A 186 RNAHFFGGRPD-DVTLMGQSAGAAATHILSLSKAADG--------LFRRAILMSGTS 233 (551)
T ss_dssp HHTGGGTEEEE-EEEEEEETHHHHHHHHHTTCGGGTT--------SCSEEEEESCCT
T ss_pred HHHHHhCCChh-hEEEEEEChHHhhhhccccCchhhh--------hhhheeeecCCc
Confidence 32 33 45 799999999999999888763 33 799999999864
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.10 E-value=2.7e-05 Score=68.79 Aligned_cols=113 Identities=14% Similarity=0.018 Sum_probs=64.9
Q ss_pred CCCceEEEecCCCCC---CCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCC-CCCCCCHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGS---GRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEG-LDPPHDIANAANDLA 113 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~-~~~~~~~~~~~~~l~ 113 (325)
...|+||++||.+.. ...|... .+..... .|+.|+++|+| |++.+..... ......+.|....+.
T Consensus 100 ~~~Pviv~iHGGg~~~g~~~~~~~~--~~~~~~~-----~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~ 172 (522)
T 1ukc_A 100 SKLPVWLFIQGGGYAENSNANYNGT--QVIQASD-----DVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALR 172 (522)
T ss_dssp CCEEEEEEECCSTTTSCCSCSCCCH--HHHHHTT-----SCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHH
T ss_pred CCCCEEEEECCCccccCCccccCcH--HHHHhcC-----CcEEEEEecccccccccccchhccccCCCChhHHHHHHHHH
Confidence 346899999998642 2333332 2221100 68999999999 5554432100 002334555544443
Q ss_pred HHHH---HhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 114 NLVK---AKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 114 ~~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
-+.+ +++ .+ +++|+|+|.||..+..++...... ....++++|+.++..
T Consensus 173 wv~~ni~~fggDp~-~v~i~G~SaGg~~v~~~l~~~~~~----~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 173 WVKQYIEQFGGDPD-HIVIHGVSAGAGSVAYHLSAYGGK----DEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHTGGGTC----CCSSCSEEEEESCCC
T ss_pred HHHHHHHHcCCCch-hEEEEEEChHHHHHHHHHhCCCcc----ccccchhhhhcCCCc
Confidence 3333 333 35 799999999998777666543100 012789999988764
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00011 Score=63.88 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=75.6
Q ss_pred CceEEEecCCCCCCCChH---HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC------CCCCCHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWR---SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL------DPPHDIANAANDLAN 114 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~~~l~~ 114 (325)
+|.+|++ |.-++...+. .++..+++.+ |--+|.+.+|-+|.|.+.... -...+.++...|+..
T Consensus 43 gPIfl~~-gGEg~~~~~~~~~g~~~~lA~~~-------~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~ 114 (472)
T 4ebb_A 43 GPIFFYT-GNEGDVWAFANNSAFVAELAAER-------GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAE 114 (472)
T ss_dssp CCEEEEE-CCSSCHHHHHHHCHHHHHHHHHH-------TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHH
T ss_pred CcEEEEE-CCCccccccccCccHHHHHHHHh-------CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHH
Confidence 5555555 4433332221 2444566654 448899999999999864211 134689999999999
Q ss_pred HHHHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 115 LVKAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 115 ~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+++.+. .+.|++++|-|.||++|..+-.+||+ .|.+.+.-+++
T Consensus 115 fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~--------lv~ga~ASSAp 162 (472)
T 4ebb_A 115 LLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPH--------LVAGALAASAP 162 (472)
T ss_dssp HHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTT--------TCSEEEEETCC
T ss_pred HHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCC--------eEEEEEecccc
Confidence 987652 12489999999999999999999999 88888876654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00012 Score=64.84 Aligned_cols=117 Identities=10% Similarity=-0.017 Sum_probs=64.4
Q ss_pred CCCceEEEecCCCCCCCC---h--HHHHH-HHHhhhhccCCCCceEEEEeCCCCC--C--CCCCC-CCCCCCCCHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRN---W--RSFSR-NLASTLSQTSASSEWRMVLVDLRNH--G--RSAEI-EGLDPPHDIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~---~--~~~~~-~l~~~~~~~~~~~~~~vi~~D~~G~--G--~S~~~-~~~~~~~~~~~~~~ 110 (325)
...|+||++||.+..... | ..++. .++.. .++.|+++++|.- | .+... ........+.|...
T Consensus 112 ~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~-------~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~ 184 (534)
T 1llf_A 112 ANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMG-------KPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRL 184 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTT-------CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHH
T ss_pred CCceEEEEEeCCCcccCCCcccCchHHHHHHHhcC-------CCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHH
Confidence 346899999998643322 2 22332 23321 5899999999942 2 11100 00002334555554
Q ss_pred HHHHHHH---HhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 111 DLANLVK---AKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 111 ~l~~~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+.-+.+ +.+ .+ +++|+|+|.||..+...+........-.....++++|+.++.+
T Consensus 185 Al~wv~~ni~~fggDp~-~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 185 GMQWVADNIAGFGGDPS-KVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHHHHHHHHhCCCcc-cEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 4444433 333 35 8999999999987776665530000000012799999998754
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.9e-05 Score=69.59 Aligned_cols=111 Identities=14% Similarity=-0.080 Sum_probs=65.2
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCC------CCCCCCCCCHHHH
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAE------IEGLDPPHDIANA 108 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~------~~~~~~~~~~~~~ 108 (325)
...|++|++||.+. +...+......|++. .++-|+.+++| |+..... .........+.|.
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~-------~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~ 211 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSATLDIYNADIMAAV-------GNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQ 211 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHH-------HTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCCCCCCCchhhhcc-------CCEEEEEecccccchhhcccccccccccCCCCCCcccHHHH
Confidence 34688999999653 333222223345432 57999999999 4443211 0000023334454
Q ss_pred HHHHHHHHH---HhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 109 ANDLANLVK---AKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 109 ~~~l~~~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...+.-+.+ ..+ .+ +|+|+|+|.||..+..++..... ...+++.|+.++..
T Consensus 212 ~~al~wv~~ni~~fggDp~-~vti~G~SaGg~~v~~~~~~~~~------~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 212 ALAIRWLKDNAHAFGGNPE-WMTLFGESAGSSSVNAQLMSPVT------RGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHSTGGGTEEEE-EEEEEEETHHHHHHHHHHHCTTT------TTSCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCcc-eeEEeecchHHHHHHHHHhCCcc------cchhHhhhhhcccc
Confidence 444433333 233 35 89999999999988877764211 12789999998764
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.96 E-value=5.1e-05 Score=67.35 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=65.5
Q ss_pred CCCceEEEecCCCCCCC---Ch--HHHHH-HHHhhhhccCCCCceEEEEeCCCCC--C--CCCCC-CCCCCCCCHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGR---NW--RSFSR-NLASTLSQTSASSEWRMVLVDLRNH--G--RSAEI-EGLDPPHDIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~---~~--~~~~~-~l~~~~~~~~~~~~~~vi~~D~~G~--G--~S~~~-~~~~~~~~~~~~~~ 110 (325)
...|+||++||.+.... .| ..++. .++.. .++-|+.+|+|.- | .+... ........+.|...
T Consensus 120 ~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~-------~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~ 192 (544)
T 1thg_A 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMG-------QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRK 192 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTT-------CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHH
T ss_pred CCCcEEEEECCCccccCCccccCchHHHHHHhhcC-------CCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHH
Confidence 34689999999764332 22 12322 23321 5799999999952 2 11100 00002344555555
Q ss_pred HHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 111 DLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 111 ~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+.-+.+. .+ .+ +++|+|+|.||..++.++..............++++|+.++..
T Consensus 193 Al~wv~~ni~~fggDp~-~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 193 GLEWVSDNIANFGGDPD-KVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHHHHHHHhCCChh-HeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 55433333 33 35 8999999999999887776530000000012799999998754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0002 Score=57.60 Aligned_cols=135 Identities=15% Similarity=0.025 Sum_probs=90.7
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhc----------cCCCCceEEEEeCCC-CCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ----------TSASSEWRMVLVDLR-NHGRS 93 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~----------~~~~~~~~vi~~D~~-G~G~S 93 (325)
.++..|.|.-+.+.....++|.||++.|.++++..+-.+. ++....-+ .+-++-..++.+|.| |.|.|
T Consensus 31 ~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~-E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfS 109 (300)
T 4az3_A 31 SGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLT-EHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFS 109 (300)
T ss_dssp STTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHH-TTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTC
T ss_pred CCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHh-cCCCceecCCCccccccCccHHhhhcchhhcCCCccccc
Confidence 4567888888777655667899999999999887663332 22110000 001234589999966 89988
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...... ...+..+.++|+..+++.. .-. +++|.|.|.||..+-.+|...-++ ....++++++-++..
T Consensus 110 y~~~~~-~~~~~~~~a~d~~~fl~~f~~~fp~~~~~-~~yi~GESY~G~yvP~~a~~i~~~----~~inLkG~~iGNg~~ 183 (300)
T 4az3_A 110 YSDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNN-KLFLTGESYAGIYIPTLAVLVMQD----PSMNLQGLAVGNGLS 183 (300)
T ss_dssp EETTCC-CCCBHHHHHHHHHHHHHHHHHHCGGGTTS-CEEEEEETTHHHHHHHHHHHHTTC----TTSCEEEEEEESCCS
T ss_pred ccCCCc-ccccchhhHHHHHHHHHHHHHhChhhcCC-ceEEEecCCceeeHHHHHHHHHhC----CCcccccceecCCcc
Confidence 765431 3456778888887777642 334 899999999999999888764331 113578888777653
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0001 Score=58.45 Aligned_cols=137 Identities=14% Similarity=0.062 Sum_probs=80.5
Q ss_pred cccceEEEEccc-CCCCCCCceEEEecCCCCCCCCh-HHHHHHHHhhhh----------ccCCCCceEEEEeC-CCCCCC
Q 020518 26 SLQTLAYEEVRS-SSDRPYTSTAFVLHGLLGSGRNW-RSFSRNLASTLS----------QTSASSEWRMVLVD-LRNHGR 92 (325)
Q Consensus 26 ~~~~l~y~~~~~-~~~~~~~~~vv~~HG~~~~~~~~-~~~~~~l~~~~~----------~~~~~~~~~vi~~D-~~G~G~ 92 (325)
.+..|.|.-+.. .....++|.+++++|.++++..+ -.+. ++....- ..+-++-..++.+| ..|.|.
T Consensus 35 ~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~-E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGf 113 (270)
T 1gxs_A 35 NGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQ-ELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGF 113 (270)
T ss_dssp TTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHH-TTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTT
T ss_pred CCcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHH-hccCceecCCCCcceeCccchhccccEEEEeccccccc
Confidence 356888887766 33445689999999999988886 4332 2211000 00012346899999 569999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 93 SAEIEGLDPPHDIANAANDLANLVKA-------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 93 S~~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
|..........+-++.++|+..+|+. +... +++|.|+| |-. +-.+|...-++........++++++.++.
T Consensus 114 Sy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~-~~yi~GES-G~y-vP~la~~i~~~n~~~~~inLkGi~ign~~ 190 (270)
T 1gxs_A 114 SYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYR-EFYIAGES-GHF-IPQLSQVVYRNRNNSPFINFQGLLVSSGL 190 (270)
T ss_dssp CEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTS-EEEEEEEC-TTH-HHHHHHHHHHTTTTCTTCEEEEEEEESCC
T ss_pred cCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCC-CEEEEeCC-Ccc-hHHHHHHHHhccccccceeeeeEEEeCCc
Confidence 96543211233556667777666654 3444 89999999 644 44444332111000011257888888876
Q ss_pred C
Q 020518 166 P 166 (325)
Q Consensus 166 ~ 166 (325)
.
T Consensus 191 ~ 191 (270)
T 1gxs_A 191 T 191 (270)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.81 E-value=7.2e-05 Score=66.76 Aligned_cols=110 Identities=15% Similarity=-0.016 Sum_probs=65.0
Q ss_pred CCCceEEEecCCCCCCCCh---------HHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNW---------RSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~---------~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~ 108 (325)
...|+||++||.+.....- ......|+.. .++-|+.+++| |++.+..... ...+.+.|.
T Consensus 96 ~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~-------~~vvvV~~nYRLg~~Gfl~~~~~~~-pgn~gl~D~ 167 (579)
T 2bce_A 96 HDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATR-------GNVIVVTFNYRVGPLGFLSTGDSNL-PGNYGLWDQ 167 (579)
T ss_dssp CSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHH-------HTCEEEEECCCCHHHHHCCCSSTTC-CCCHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCccccccccccChHHHhcC-------CCEEEEEeCCccccccCCcCCCCCC-CCccchHHH
Confidence 3468999999976322111 1112344432 46899999999 5544422110 022345555
Q ss_pred HHHHHHHHH---HhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 109 ANDLANLVK---AKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 109 ~~~l~~~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...+.-+.+ ..+ .+ +++|+|+|.||..+..++..... ...+++.|+.++..
T Consensus 168 ~~Al~wv~~ni~~fGgDp~-~Vti~G~SAGg~~~~~~~~~~~~------~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 168 HMAIAWVKRNIEAFGGDPD-QITLFGESAGGASVSLQTLSPYN------KGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHCGGG------TTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCcc-cEEEecccccchheeccccCcch------hhHHHHHHHhcCCc
Confidence 544443333 333 35 79999999999999887764211 12789999988653
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=3.5e-05 Score=61.86 Aligned_cols=85 Identities=16% Similarity=0.187 Sum_probs=52.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEE-eCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVL-VDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~-~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
.+..||.+||... +.+.+.+ .++.+.. .|.++. .....+ ....+..+.+++..+++.+
T Consensus 73 ~~~iVva~RGT~~-------~~d~l~d--------~~~~~~~~~~~~~~--~~vh~G--f~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 1tib_A 73 NKLIVLSFRGSRS-------IENWIGN--------LNFDLKEINDICSG--CRGHDG--FTSSWRSVADTLRQKVEDAVR 133 (269)
T ss_dssp TTEEEEEECCCSC-------THHHHTC--------CCCCEEECTTTSTT--CEEEHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCC-------HHHHHHh--------cCeeeeecCCCCCC--CEecHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999863 2333443 4556665 455541 111111 1123455666666666544
Q ss_pred -CCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 120 -GWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 120 -~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
..+.++++.||||||.+|..++.+...
T Consensus 134 ~~~~~~i~l~GHSLGGalA~l~a~~l~~ 161 (269)
T 1tib_A 134 EHPDYRVVFTGHSLGGALATVAGADLRG 161 (269)
T ss_dssp HCTTSEEEEEEETHHHHHHHHHHHHHTT
T ss_pred HCCCceEEEecCChHHHHHHHHHHHHHh
Confidence 233389999999999999999998764
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=9.1e-05 Score=66.19 Aligned_cols=107 Identities=14% Similarity=0.044 Sum_probs=66.5
Q ss_pred CCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAANDLANL 115 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~l~~~ 115 (325)
..|+||++||.+... ..|.. ..|++. .++.|+++|+| |+..+..... .....+.|....+.-+
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~-------~~~vvv~~~YRl~~~Gfl~~~~~~~-~~n~gl~D~~~al~wv 199 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASY-------GNVIVITVNYRLGVLGFLSTGDQAA-KGNYGLLDLIQALRWT 199 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHH-------HTCEEEEECCCCHHHHHCCCSSSSC-CCCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhcc-------CCEEEEEeCCcCcccccCcCCCCCC-CCcccHHHHHHHHHHH
Confidence 468999999975432 22332 235542 46899999999 4433322110 0234556655555444
Q ss_pred HHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 116 VKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 116 l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+. ++ .+ +++|+|+|.||..+..++..... . ...+.++|+.++.
T Consensus 200 ~~ni~~fggdp~-~vti~G~SaGg~~~~~~~~~~~~--~---~glf~~aI~~Sg~ 248 (574)
T 3bix_A 200 SENIGFFGGDPL-RITVFGSGAGGSCVNLLTLSHYS--E---KGLFQRAIAQSGT 248 (574)
T ss_dssp HHHGGGGTEEEE-EEEEEEETHHHHHHHHHHTCTTS--C---TTSCCEEEEESCC
T ss_pred HHHHHHhCCCch-hEEEEeecccHHHHHHHhhCCCc--c---hhHHHHHHHhcCC
Confidence 433 33 34 79999999999999988876543 0 0168888988764
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00032 Score=56.52 Aligned_cols=85 Identities=18% Similarity=0.136 Sum_probs=48.2
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
.+..||.+||... . .+.+.. -++.....|....|.. ..+ ....+..+.+++...++++
T Consensus 73 ~~~iVvafRGT~~----~---~d~~~d--------~~~~~~~~~~~~~~~v--h~G--f~~~~~~~~~~~~~~l~~~~~~ 133 (279)
T 1tia_A 73 NSAVVLAFRGSYS----V---RNWVAD--------ATFVHTNPGLCDGCLA--ELG--FWSSWKLVRDDIIKELKEVVAQ 133 (279)
T ss_pred CCEEEEEEeCcCC----H---HHHHHh--------CCcEeecCCCCCCCcc--Chh--HHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999863 2 222333 3344444443211111 111 1123344445555555443
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
..+.++++.||||||.+|..++.....
T Consensus 134 ~p~~~i~vtGHSLGGalA~l~a~~l~~ 160 (279)
T 1tia_A 134 NPNYELVVVGHSLGAAVATLAATDLRG 160 (279)
T ss_pred CCCCeEEEEecCHHHHHHHHHHHHHHh
Confidence 223389999999999999999988764
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00016 Score=58.03 Aligned_cols=64 Identities=23% Similarity=0.228 Sum_probs=39.0
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 79 EWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 79 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+..+...++||........+ ....+..+.+++...++.+. .+.++++.||||||.+|..+|.+.
T Consensus 91 d~~~~~~~~p~~~~~~vh~g--f~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKG--FLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHH--HHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 34666777887421111111 12245556666655555431 222699999999999999999876
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0004 Score=50.34 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=51.8
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------C------CCCCceeEEEecCCCccccccChHHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------D------GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~------~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 320 (325)
.+++++..|..|-+++....+.+.+.+.-.. + ....+.+++.+.+|||+++.++|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 4799999999999998876666555443000 0 00013889999999999999999999999999
Q ss_pred HHhc
Q 020518 321 RIAS 324 (325)
Q Consensus 321 fl~~ 324 (325)
||..
T Consensus 144 fl~~ 147 (153)
T 1whs_B 144 FLQG 147 (153)
T ss_dssp HHHT
T ss_pred HHCC
Confidence 9963
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0018 Score=51.79 Aligned_cols=40 Identities=28% Similarity=0.363 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 105 IANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+..+.+++...++.+ ..+.++++.||||||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 344455555555433 2233899999999999999999876
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0062 Score=47.77 Aligned_cols=111 Identities=12% Similarity=0.027 Sum_probs=60.4
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD-LRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
++|.|++.+|-+.....=..+...+.+.+. ..+.+=.++ +|-... + ...+..+=++++...++..
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~-----~~~~~q~Vg~YpA~~~---~----y~~S~~~G~~~~~~~i~~~~~ 69 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVL-----DIYRWQPIGNYPAAAF---P----MWPSVEKGVAELILQIELKLD 69 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTST-----TTSEEEECCSCCCCSS---S----CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHH-----HhcCCCccccccCccc---C----ccchHHHHHHHHHHHHHHHHh
Confidence 479999999997753110112334443331 333333332 332211 0 1123344455555555432
Q ss_pred -CCCCCEEEEEeChhHHHHHHHHHHc---cccccCCccCCcceEEEEecC
Q 020518 120 -GWDWPDVVIGHSMGGKVALHFAQSC---ARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 -~~~~~~~lvGhS~Gg~~a~~~a~~~---p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+.+++|+|+|.|+.++-.++... +.........+|.++++++-+
T Consensus 70 ~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 70 ADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp HCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred hCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 3445999999999999999888662 110001112378999998854
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0071 Score=43.85 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=51.5
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCC---------------------CCCceeEEEecCCCccccccChHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG---------------------SEGKVSVHVLPNAGHWVHVDNPKGLL 315 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~gH~~~~e~p~~~~ 315 (325)
++++|+..|..|-+++....+.+.+.+.-.... ...+.+++.+.+|||+++.++|+...
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 479999999999999887666655444211000 01246789999999999999999999
Q ss_pred HHHHHHHhc
Q 020518 316 EIVAPRIAS 324 (325)
Q Consensus 316 ~~i~~fl~~ 324 (325)
+.+.+||..
T Consensus 143 ~m~~~fl~g 151 (155)
T 4az3_B 143 TMFSRFLNK 151 (155)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999963
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.70 E-value=0.031 Score=41.88 Aligned_cols=111 Identities=12% Similarity=-0.032 Sum_probs=63.8
Q ss_pred eEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEe--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 46 TAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLV--DLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 46 ~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
.|||.-|-.... ..-..+...|.+.+.. +...|..+ ++|-.-...............++...+.....+--
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~----~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP 95 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGK----DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCP 95 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCT----TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCT
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCC----CceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCC
Confidence 466666665543 2224577777766521 45778888 78744221100000011123344444444444443
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
-. +++|+|+|.|+.++-.++...|... ..+|.++++++-+
T Consensus 96 ~t-kiVL~GYSQGA~V~~~~~~~l~~~~----~~~V~avvlfGdP 135 (197)
T 3qpa_A 96 DA-TLIAGGYXQGAALAAASIEDLDSAI----RDKIAGTVLFGYT 135 (197)
T ss_dssp TC-EEEEEEETHHHHHHHHHHHHSCHHH----HTTEEEEEEESCT
T ss_pred CC-cEEEEecccccHHHHHHHhcCCHhH----HhheEEEEEeeCC
Confidence 34 9999999999999998887655211 1289999998854
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0029 Score=50.34 Aligned_cols=22 Identities=32% Similarity=0.374 Sum_probs=20.0
Q ss_pred CEEEEEeChhHHHHHHHHHHcc
Q 020518 124 PDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
++++.||||||.+|..++....
T Consensus 126 ~i~vtGHSLGGalA~l~a~~l~ 147 (261)
T 1uwc_A 126 ALTVTGHSLGASMAALTAAQLS 147 (261)
T ss_dssp EEEEEEETHHHHHHHHHHHHHH
T ss_pred eEEEEecCHHHHHHHHHHHHHh
Confidence 8999999999999999988754
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.006 Score=48.96 Aligned_cols=36 Identities=28% Similarity=0.312 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.+.+..++++.... ++++.|||+||.+|..+|....
T Consensus 125 ~~~l~~~~~~~p~~-~l~vtGHSLGGalA~l~a~~l~ 160 (279)
T 3uue_A 125 FTAVKKYKKEKNEK-RVTVIGHSLGAAMGLLCAMDIE 160 (279)
T ss_dssp HHHHHHHHHHHTCC-CEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCc-eEEEcccCHHHHHHHHHHHHHH
Confidence 33444445554545 8999999999999999887643
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0038 Score=49.44 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=24.6
Q ss_pred HHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 111 DLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 111 ~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.+..++++.... ++++.|||+||.+|..++....
T Consensus 113 ~l~~~~~~~p~~-~i~vtGHSLGGalA~l~a~~l~ 146 (258)
T 3g7n_A 113 EVKALIAKYPDY-TLEAVGHSLGGALTSIAHVALA 146 (258)
T ss_dssp HHHHHHHHSTTC-EEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-eEEEeccCHHHHHHHHHHHHHH
Confidence 344444444434 8999999999999998887643
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.024 Score=43.19 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=53.6
Q ss_pred eEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCCCC--CHHHHHHHHHHHHHHh-
Q 020518 46 TAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDPPH--DIANAANDLANLVKAK- 119 (325)
Q Consensus 46 ~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~~~--~~~~~~~~l~~~l~~~- 119 (325)
.||+..|-+.... ....+...|.+.+ .+-.+..+++|-. |.+... . ..| +..+=++++...++..
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~------~g~~~~~V~YpA~~~~~~~~-~--~~y~~S~~~G~~~~~~~i~~~~ 76 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAY------PGSTAEAINYPACGGQSSCG-G--ASYSSSVAQGIAAVASAVNSFN 76 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS------TTCEEEECCCCCCSSCGGGT-S--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhC------CCCceEEeeccccccccccC-C--cchhhhHHHHHHHHHHHHHHHH
Confidence 4667777665431 2246778887766 4557888888864 222110 1 122 3334444555554433
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHH
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
..+.+++|+|+|.|+.++-.++.
T Consensus 77 ~~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 77 SQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred HhCCCCcEEEEeeCchHHHHHHHHh
Confidence 34448999999999999988875
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.028 Score=42.32 Aligned_cols=112 Identities=11% Similarity=-0.093 Sum_probs=64.2
Q ss_pred ceEEEecCCCCCCCC----hHHHHHHHHhhhhccCCCCceEEEEe--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 45 STAFVLHGLLGSGRN----WRSFSRNLASTLSQTSASSEWRMVLV--DLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
-.|||..|-+..... -..+...|.+.++. +...|..+ ++|-.-...............++...+.....+
T Consensus 26 v~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~----~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~ 101 (201)
T 3dcn_A 26 VIYIFARASTEPGNMGISAGPIVADALERIYGA----NDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTK 101 (201)
T ss_dssp EEEEEECCTTCCTTTCSSHHHHHHHHHHHHHCG----GGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCCccccHHHHHHHHHhcCC----CceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHh
Confidence 346777776554432 24577788776621 34678888 677432111000000112234444444444444
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
---. +++|+|+|.|+.++-.++..-|... ..+|.++++++-+
T Consensus 102 CP~t-kiVL~GYSQGA~V~~~~~~~l~~~~----~~~V~avvlfGdP 143 (201)
T 3dcn_A 102 CPNA-AIVSGGYSQGTAVMAGSISGLSTTI----KNQIKGVVLFGYT 143 (201)
T ss_dssp CTTS-EEEEEEETHHHHHHHHHHTTSCHHH----HHHEEEEEEETCT
T ss_pred CCCC-cEEEEeecchhHHHHHHHhcCChhh----hhheEEEEEeeCc
Confidence 4434 9999999999999988876544100 1278999998854
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0055 Score=49.77 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
.+.+..++++.... ++++.|||+||.+|..+|.....
T Consensus 141 ~~~l~~~~~~~p~~-~i~vtGHSLGGalA~l~a~~l~~ 177 (301)
T 3o0d_A 141 GPKLDSVIEQYPDY-QIAVTGHSLGGAAALLFGINLKV 177 (301)
T ss_dssp HHHHHHHHHHSTTS-EEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCc-eEEEeccChHHHHHHHHHHHHHh
Confidence 34445555444434 89999999999999999887654
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.035 Score=42.23 Aligned_cols=88 Identities=14% Similarity=0.024 Sum_probs=53.5
Q ss_pred eEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCCCCCCCCC--CHHHHHHHHHHHHHHh-
Q 020518 46 TAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPPH--DIANAANDLANLVKAK- 119 (325)
Q Consensus 46 ~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~~~~~~~~--~~~~~~~~l~~~l~~~- 119 (325)
.||+..|-+.... ....+...|.+.+ .+-++..+++|-.. .+.. .. ..| +..+=++++...++..
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~------~g~~~~~V~YpA~~~~~~~-~~--~~y~~S~~~G~~~~~~~i~~~~ 76 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAH------PGTTSEAIVYPACGGQASC-GG--ISYANSVVNGTNAAAAAINNFH 76 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS------TTEEEEECCSCCCSSCGGG-TT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhc------CCCceEEeecccccccccc-CC--ccccccHHHHHHHHHHHHHHHH
Confidence 4667777665442 2246778887766 56678888888642 2211 11 122 2333344444444432
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHH
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
..+.+++|+|+|.|+.++-.++.
T Consensus 77 ~~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 77 NSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred hhCCCCcEEEEEeCchHHHHHHHHh
Confidence 34448999999999999988875
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0049 Score=50.31 Aligned_cols=23 Identities=35% Similarity=0.514 Sum_probs=20.1
Q ss_pred CCEEEEEeChhHHHHHHHHHHcc
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.++++.|||+||.+|..++....
T Consensus 136 ~~i~vtGHSLGGAlA~L~a~~l~ 158 (319)
T 3ngm_A 136 FKVVSVGHSLGGAVATLAGANLR 158 (319)
T ss_dssp CEEEEEEETHHHHHHHHHHHHHH
T ss_pred CceEEeecCHHHHHHHHHHHHHH
Confidence 38999999999999999887654
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.05 Score=40.45 Aligned_cols=108 Identities=16% Similarity=-0.006 Sum_probs=63.3
Q ss_pred ceEEEecCCCCCCCC----hHHHHHHHHhhhhccCCCCceEEEEeC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-
Q 020518 45 STAFVLHGLLGSGRN----WRSFSRNLASTLSQTSASSEWRMVLVD--LRNHGRSAEIEGLDPPHDIANAANDLANLVK- 117 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~vi~~D--~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~- 117 (325)
-.|||.-|-...... -..++..|.+.+. ....|..++ +|-.-..... ..-+...-++++..+++
T Consensus 15 v~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~-----~~v~v~~V~~~YpA~~~~~~~----~~~s~~~g~~~~~~~i~~ 85 (187)
T 3qpd_A 15 ITFIFARASTEPGLLGISTGPAVCNRLKLARS-----GDVACQGVGPRYTADLPSNAL----PEGTSQAAIAEAQGLFEQ 85 (187)
T ss_dssp EEEEEECCTTCCTTTCSSHHHHHHHHHHHHST-----TCEEEEECCSSCCCCGGGGGS----TTSSCHHHHHHHHHHHHH
T ss_pred eEEEEeeCCCCCCCCCccccHHHHHHHHHHcC-----CCceEEeeCCcccCcCccccc----cccchhHHHHHHHHHHHH
Confidence 346777777555432 1357777877652 457888888 7743211000 01122333344444433
Q ss_pred --HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 118 --AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 118 --~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
...++.+++|+|+|.|+.++-.++..-|... ..+|.++++++-+
T Consensus 86 ~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~----~~~V~avvlfGdP 131 (187)
T 3qpd_A 86 AVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADV----QDKIKGVVLFGYT 131 (187)
T ss_dssp HHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHH----HHHEEEEEEESCT
T ss_pred HHHhCCCCcEEEEeeccccHHHHhhhhcCCHhh----hhhEEEEEEeeCC
Confidence 2244449999999999999998876554200 1278999998854
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.95 E-value=0.025 Score=41.00 Aligned_cols=68 Identities=12% Similarity=0.141 Sum_probs=51.1
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhc----------C---CC------CCCceeEEEecCCCccccccChHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQ----------G---DG------SEGKVSVHVLPNAGHWVHVDNPKGLLEI 317 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----------~---~~------~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 317 (325)
.+++++..|..|-+++....+.+.+.+.-. . +. ...+.+++.+.+|||+++.++|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 479999999999999887666554443200 0 00 0124778999999999999999999999
Q ss_pred HHHHHhc
Q 020518 318 VAPRIAS 324 (325)
Q Consensus 318 i~~fl~~ 324 (325)
+..||..
T Consensus 146 ~~~fl~g 152 (158)
T 1gxs_B 146 FKQFLKG 152 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999863
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.28 Score=39.58 Aligned_cols=117 Identities=11% Similarity=-0.013 Sum_probs=65.9
Q ss_pred ceEEEecCCCCCCC-------------ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC--CHHHHH
Q 020518 45 STAFVLHGLLGSGR-------------NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH--DIANAA 109 (325)
Q Consensus 45 ~~vv~~HG~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~--~~~~~~ 109 (325)
-.||+.-|-+.... ....+...|.+.+.. ....++.++++-.-...........| +..+=+
T Consensus 41 v~vi~ARGT~E~~~~g~p~~p~~~~~g~~~~v~~~L~~~~~g----~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~ 116 (302)
T 3aja_A 41 VMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGP----DRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGM 116 (302)
T ss_dssp EEEEEECCTTSCCTTSCSSSCCSCTTCTTHHHHHHHHHHSCT----TTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHH
T ss_pred eEEEEecCCCCCCCCCCCcCcccccchhHHHHHHHHHHHcCC----CcceEEeccccccccccccccccccccccHHHHH
Confidence 34777878766542 335677777766521 45677888887543211000000111 333334
Q ss_pred HHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 110 NDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 110 ~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+++...++.. ..+.+++|+|+|-|+.++-.++...+.........+|.+++|++-+
T Consensus 117 ~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 117 RTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCT
T ss_pred HHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCC
Confidence 4444444332 3444999999999999999887643210000011389999998854
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=93.57 E-value=0.056 Score=44.73 Aligned_cols=23 Identities=30% Similarity=0.326 Sum_probs=20.1
Q ss_pred CEEEEEeChhHHHHHHHHHHccc
Q 020518 124 PDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
++++.|||+||.+|..+|.....
T Consensus 167 ~i~vtGHSLGGAlA~l~a~~l~~ 189 (346)
T 2ory_A 167 KICVTGHSKGGALSSTLALWLKD 189 (346)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHH
T ss_pred eEEEecCChHHHHHHHHHHHHHH
Confidence 89999999999999999876543
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.19 E-value=0.017 Score=48.67 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHcc
Q 020518 106 ANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+++.+.|..++++..- +.++++.|||+||.+|..+|....
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L~ 250 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIV 250 (419)
Confidence 3445556666655432 127999999999999999887654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=92.66 E-value=0.32 Score=41.88 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=51.7
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhh--------c--C-C----------CCCCceeEEEecCCCccccccChHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANR--------Q--G-D----------GSEGKVSVHVLPNAGHWVHVDNPKGLL 315 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------~--~-~----------~~~~~~~~~~~~~~gH~~~~e~p~~~~ 315 (325)
.++|++..|..|-+++....+.+.+.+.- + . + ....+.+++.+.+|||+++.++|++..
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 47999999999999988766666554420 0 0 0 001247788999999999999999999
Q ss_pred HHHHHHHhc
Q 020518 316 EIVAPRIAS 324 (325)
Q Consensus 316 ~~i~~fl~~ 324 (325)
+.+..||..
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999863
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=92.48 E-value=0.26 Score=37.29 Aligned_cols=100 Identities=11% Similarity=0.046 Sum_probs=61.4
Q ss_pred ceEEEecCCCCCCC---ChHHHHHH-HHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 45 STAFVLHGLLGSGR---NWRSFSRN-LASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 45 ~~vv~~HG~~~~~~---~~~~~~~~-l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
-.||+..|-+.... ....++.. |.+.. +-....+++|-.- . .. + .+=+.++...|+..
T Consensus 9 v~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~-------g~~~~~V~YpA~~---~-----y~-S-~~G~~~~~~~i~~~~ 71 (205)
T 2czq_A 9 YVLINTRGTGEPQGQSAGFRTMNSQITAALS-------GGTIYNTVYTADF---S-----QN-S-AAGTADIIRRINSGL 71 (205)
T ss_dssp EEEEEECCTTCCSSSCTTTHHHHHHHHHHSS-------SEEEEECCSCCCT---T-----CC-C-HHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhcc-------CCCceeecccccC---C-----Cc-C-HHHHHHHHHHHHHHH
Confidence 34666667655442 34577777 66543 3344677766321 1 12 4 55556666655543
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecC
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+.+++|+|+|.|+.++-.++... |.. ...+|.+++|++-+
T Consensus 72 ~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~----~~~~V~avvlfGdP 117 (205)
T 2czq_A 72 AANPNVCYILQGYSQGAAATVVALQQLGTSGA----AFNAVKGVFLIGNP 117 (205)
T ss_dssp HHCTTCEEEEEEETHHHHHHHHHHHHHCSSSH----HHHHEEEEEEESCT
T ss_pred hhCCCCcEEEEeeCchhHHHHHHHHhccCChh----hhhhEEEEEEEeCC
Confidence 3444899999999999998887654 310 11279999999844
|
| >3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=83.07 E-value=0.9 Score=36.89 Aligned_cols=29 Identities=38% Similarity=0.634 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
+.+++...|+. +-.++|||+|=..|+.+|
T Consensus 72 l~~~l~~~Gi~-P~~v~GHSlGE~aAa~~a 100 (307)
T 3im8_A 72 IYRLLQEKGYQ-PDMVAGLSLGEYSALVAS 100 (307)
T ss_dssp HHHHHHHTTCC-CSEEEESTTHHHHHHHHT
T ss_pred HHHHHHHcCCC-ceEEEccCHHHHHHHHHc
Confidence 45666778998 999999999998887765
|
| >3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=82.14 E-value=1 Score=37.11 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
+.+++...|+. +-.++|||+|=..|+.+|
T Consensus 73 l~~ll~~~Gi~-P~~v~GHSlGE~aAa~~A 101 (336)
T 3ptw_A 73 ILTALDKLGVK-SHISCGLSLGEYSALIHS 101 (336)
T ss_dssp HHHHHHHTTCC-CSEEEESTTHHHHHHHHT
T ss_pred HHHHHHHcCCC-CCEEEEcCHhHHHHHHHh
Confidence 45667788999 999999999999888765
|
| >2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A | Back alignment and structure |
|---|
Probab=82.08 E-value=1.3 Score=35.84 Aligned_cols=30 Identities=23% Similarity=0.254 Sum_probs=24.3
Q ss_pred HHHHHHHh---CCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAK---GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.++++.. |+. +..++|||+|-..|+.+|.
T Consensus 71 l~~~l~~~~~~Gi~-P~~v~GhSlGE~aAa~~aG 103 (303)
T 2qc3_A 71 AHQELARRCVLAGK-DVIVAGHSVGEIAAYAIAG 103 (303)
T ss_dssp HHHHHHHTTTTTTC-CEEEEECTTHHHHHHHHTT
T ss_pred HHHHHHHhhhcCCC-ccEEEECCHHHHHHHHHhC
Confidence 45556677 998 9999999999998887763
|
| >3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=81.95 E-value=1.8 Score=33.60 Aligned_cols=51 Identities=16% Similarity=0.171 Sum_probs=34.0
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCE--EEEEeChh
Q 020518 83 VLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD---WPD--VVIGHSMG 133 (325)
Q Consensus 83 i~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~--~lvGhS~G 133 (325)
+.+-+-|||+.......-..++.++++.-|..+.+.++.. ..+ .|+|.||+
T Consensus 106 lRWqlVGHGr~e~n~~tlaG~sa~~LA~~L~~f~~~~~~~~~P~~I~~sLvGCsL~ 161 (267)
T 3ho6_A 106 VKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMF 161 (267)
T ss_dssp EEEEEECCCCSSCCSSCBTTBCHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCC
T ss_pred eEEEEEeCCCCCCCccccCCCCHHHHHHHHHHHHHHhhccCCCCcceeeeEeeecC
Confidence 4444559999854433236789999999999999887642 134 55555554
|
| >3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B* | Back alignment and structure |
|---|
Probab=81.61 E-value=1.1 Score=34.29 Aligned_cols=40 Identities=8% Similarity=0.142 Sum_probs=30.4
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 82 MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 82 vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
-+.+.+-|||++...+.....++.++++..|..+.+.++.
T Consensus 102 kiRwqlVGHGr~e~n~~~fag~sadeLa~~L~~f~~~~~~ 141 (254)
T 3pa8_A 102 KIKLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKE 141 (254)
T ss_dssp EEEEEEECCCCSSCCSSEETTEEHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEecCcCCCCcceeccCCHHHHHHHHHHHHHHHhh
Confidence 3555666999986654333678999999999999998864
|
| >2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=81.18 E-value=1.2 Score=36.08 Aligned_cols=29 Identities=28% Similarity=0.254 Sum_probs=24.0
Q ss_pred HHHHHHH-hCCCCCEEEEEeChhHHHHHHHH
Q 020518 112 LANLVKA-KGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 112 l~~~l~~-~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
+.+++.. .|+. +..++|||+|=+.|+.+|
T Consensus 70 l~~~l~~~~Gi~-P~~v~GHSlGE~aAa~~A 99 (305)
T 2cuy_A 70 AYRAFLEAGGKP-PALAAGHSLGEWTAHVAA 99 (305)
T ss_dssp HHHHHHHTTCCC-CSEEEESTHHHHHHHHHT
T ss_pred HHHHHHHhcCCC-CcEEEECCHHHHHHHHHh
Confidence 4556677 8998 999999999999888765
|
| >2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=80.72 E-value=1.6 Score=35.69 Aligned_cols=30 Identities=27% Similarity=0.511 Sum_probs=24.6
Q ss_pred HHHHHHHh---CCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAK---GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.++++.. |+. +-.++|||+|=+.|+.+|.
T Consensus 83 l~~ll~~~~~~Gi~-P~~v~GHSlGE~aAa~~AG 115 (321)
T 2h1y_A 83 AYQLLNKQANGGLK-PVFALGHSLGEVSAVSLSG 115 (321)
T ss_dssp HHHHHHHHSTTSCC-CSEEEECTHHHHHHHHHHT
T ss_pred HHHHHHHhhhcCCC-ccEEEEcCHHHHHHHHHcC
Confidence 45566777 998 9999999999999887763
|
| >1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* | Back alignment and structure |
|---|
Probab=80.38 E-value=1.3 Score=35.91 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=24.1
Q ss_pred HHHHHHHh-CCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAK-GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.+++... |+. +..++|||+|=..|+.+|.
T Consensus 73 l~~~l~~~~Gi~-P~~v~GhSlGE~aAa~~aG 103 (309)
T 1mla_A 73 LYRVWQQQGGKA-PAMMAGHSLGEYSALVCAG 103 (309)
T ss_dssp HHHHHHHTTCCC-CSEEEESTHHHHHHHHHTT
T ss_pred HHHHHHHhcCCC-CCEEEECCHHHHHHHHHhC
Confidence 35556677 998 9999999999998887653
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=80.06 E-value=1.3 Score=37.45 Aligned_cols=29 Identities=31% Similarity=0.399 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
+.++++..|+. +-.++|||+|=+.|+.+|
T Consensus 158 l~~ll~~~Gv~-P~~v~GHS~GE~aAa~~A 186 (401)
T 4amm_A 158 GIRWLDRLGAR-PVGALGHSLGELAALSWA 186 (401)
T ss_dssp HHHHHHHHTCC-CSEEEECTTHHHHHHHHT
T ss_pred HHHHHHHcCCC-CCEEEECCHHHHHHHHHh
Confidence 45677888999 999999999999888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 325 | ||||
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 1e-16 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 2e-12 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 4e-11 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 6e-11 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 4e-10 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 5e-09 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 6e-09 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 9e-09 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 1e-08 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 2e-08 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 5e-08 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 5e-08 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 3e-07 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 3e-07 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 3e-07 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 5e-07 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 5e-07 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 8e-07 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-06 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-06 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 3e-06 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 9e-06 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 1e-05 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-05 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 2e-05 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 3e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 4e-05 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 6e-05 | |
| d1ei9a_ | 279 | c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {C | 7e-05 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 2e-04 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 3e-04 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 7e-04 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 8e-04 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 0.001 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 0.002 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 0.002 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 0.002 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 0.003 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 0.003 |
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.3 bits (186), Expect = 1e-16
Identities = 35/277 (12%), Positives = 69/277 (24%), Gaps = 25/277 (9%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HGL S ++R + + ++DL + S +
Sbjct: 8 VHGLFDSSYSFRHLLEYINE------THPGTVVTVLDLFDGRESLR----PLWEQVQGFR 57
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL--PKQLWVLDSVPG 167
+ ++ +I +S GG V + F++L P+ D+
Sbjct: 58 EAVVPIMAKAPQGV--HLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL 115
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
K S + W H +L + S + +
Sbjct: 116 KWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATV 175
Query: 228 WAFNLDGAVQ----MFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLA 283
W N ++ W ++ E+ + D L+ L
Sbjct: 176 WRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSF-GLKTLL 234
Query: 284 NRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
R G + + H N + P
Sbjct: 235 AR------GAIVRCPMAGISHTAWHSNRTLYETCIEP 265
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 64.1 bits (154), Expect = 2e-12
Identities = 32/278 (11%), Positives = 63/278 (22%), Gaps = 30/278 (10%)
Query: 48 FVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106
FVL H + W L + ++ +DL G ++
Sbjct: 5 FVLIHTICHGAWIWHKLKPLLEA--------LGHKVTALDLAASGVDPR--QIEEIGSFD 54
Query: 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166
+ L ++A +++G S GG A +++
Sbjct: 55 EYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKY-----------CEKIAAAVFHN 103
Query: 167 GKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERE 226
+ + E+ K + NL E
Sbjct: 104 SVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPE 163
Query: 227 TWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQ 286
+ + ++ P G I D Q
Sbjct: 164 EYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLW--QIENY 221
Query: 287 GDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
V+ + H + + K + EI+ +A
Sbjct: 222 KP-----DKVYKVEGGDHKLQLTKTKEIAEILQ-EVAD 253
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 60.3 bits (144), Expect = 4e-11
Identities = 36/270 (13%), Positives = 76/270 (28%), Gaps = 26/270 (9%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG G +W L + + ++ +DL G ++ + +
Sbjct: 8 VHGACHGGWSWYKLKPLLEA--------AGHKVTALDLAASGTDLR--KIEELRTLYDYT 57
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
L L+++ D +++GHS+GG + + Y V +
Sbjct: 58 LPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYA---------AVFLAAFMPD 108
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
NS +E+ + + + L +++ L + E A
Sbjct: 109 SVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLA 168
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
++S G + D+ P+ QR + G
Sbjct: 169 LASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRW--QIDNIGV- 225
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIVA 319
+ A H + P+ L +
Sbjct: 226 ----TEAIEIKGADHMAMLCEPQKLCASLL 251
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 59.9 bits (143), Expect = 6e-11
Identities = 35/292 (11%), Positives = 82/292 (28%), Gaps = 22/292 (7%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR 88
+ Y+ ++ ++ +HG G ++ R++ ++ D
Sbjct: 13 YIYYKLCKAPEEKA---KLMTMHGGPGMSHDYLLSLRDMTK--------EGITVLFYDQF 61
Query: 89 NHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARAD 148
G E I + L + ++G S GG +AL +A
Sbjct: 62 --GCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHL 119
Query: 149 YGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSI-PSRKWLVNHMMELGF 207
G V+ L + + ++ S S P + VN+
Sbjct: 120 KGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHL 179
Query: 208 SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267
+S + + F + W + + ++ +
Sbjct: 180 LRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGE 239
Query: 268 SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVA 319
D P+V + + +HV + H ++ +G ++++
Sbjct: 240 YDEVTPNVARVIHEKIAG--------SELHVFRDCSHLTMWEDREGYNKLLS 283
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 57.5 bits (138), Expect = 4e-10
Identities = 43/307 (14%), Positives = 85/307 (27%), Gaps = 37/307 (12%)
Query: 42 PYTSTAF---VLHGLLGSGRNWRSFS--RNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96
Y +T + ++HGL G+ + + S L S ++ + +L
Sbjct: 3 TYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDL----QSHGAKVYVANLSGFQSDD-- 56
Query: 97 EGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVAL 155
P + ++ A G +IGHS GG + + A +
Sbjct: 57 ---GPNGRGEQLLAYVKQVLAATGAT-KVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
Query: 156 PKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEW- 214
P + V + G V+ ++ ++ S + +
Sbjct: 113 PHRGSEFADFVQDVLKTDPTGLSSTVIAAFVNVFGTLVSSSHNTDQDALAALRTLTTAQT 172
Query: 215 ---------IGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265
G S + + G+ + S+ + P
Sbjct: 173 ATYNRNFPSAGLGAPGSCQTGAATETVGGSQHLLYSWGGTAIQPTSTVLGVTGATDTSTG 232
Query: 266 EKS-----DRWDPDVIQRLEGLANRQGDGSEGKVSV------HVLPNAGHWVHVDNPKGL 314
D ++ + NR ++G VS V+ + HW H+D L
Sbjct: 233 TLDVANVTDPSTLALLATGAVMINRASGQNDGLVSRCSSLFGQVISTSYHWNHLDEINQL 292
Query: 315 LEIVAPR 321
L +
Sbjct: 293 LGVRGAN 299
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 54.1 bits (128), Expect = 5e-09
Identities = 37/299 (12%), Positives = 76/299 (25%), Gaps = 26/299 (8%)
Query: 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87
+ + Y +V P LHG S WR+ ++A R + DL
Sbjct: 17 ERMHYVDVGPRDGTP----VLFLHGNPTSSYLWRNIIPHVAP---------SHRCIAPDL 63
Query: 88 RNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARA 147
G+S + + D + V++ H G + H+A+
Sbjct: 64 IGMGKSDKPDLDYFFDDHVRYLDAFIE----ALGLEEVVLVIHDWGSALGFHWAKRNPER 119
Query: 148 DYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGF 207
G + + E + + + + L ++
Sbjct: 120 VKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLT 179
Query: 208 SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ-GMEIAIVRAE 266
+ + LK W F + + + + Q + +
Sbjct: 180 EVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGT 239
Query: 267 KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
P RL + H++ DNP + +A + +
Sbjct: 240 PGVLIPPAEAARLAESLPN--------CKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 53.7 bits (127), Expect = 6e-09
Identities = 43/276 (15%), Positives = 77/276 (27%), Gaps = 38/276 (13%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG + WR L+S + + LVDL GRS L
Sbjct: 17 LHGWGLNAEVWRCIDEELSS---------HFTLHLVDLPGFGRSRGFGALSLADMAEAVL 67
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+ +G S+GG VA A + L + S P
Sbjct: 68 QQ---------APDKAIWLGWSLGGLVASQIALTHPERVRA--------LVTVASSPCFS 110
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+ G VL Q S + V + L + + K
Sbjct: 111 ARDEWPGIKPDVLAGFQQQLSDDQ--QRTVERFLALQTMGTETARQDARALKKTVLALPM 168
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
+D + + L++ +++ D V +++ + ++
Sbjct: 169 PEVDVLNGGLEILKTVDLRQPLQN------VSMPFLRLYGYLDGLVPRKVVPMLDKLWPH 222
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
SE ++ A H + +P ++ V
Sbjct: 223 SE----SYIFAKAAHAPFISHPAEFCHLLVALKQRV 254
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 53.4 bits (126), Expect = 9e-09
Identities = 42/304 (13%), Positives = 79/304 (25%), Gaps = 27/304 (8%)
Query: 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR 88
L ++ +D ++ G S W ++ A ++ D R
Sbjct: 11 ELWSDDFGDPADPA----LLLVMGGNLSALGWPD-------EFARRLADGGLHVIRYDHR 59
Query: 89 NHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARAD 148
+ GRS + P+ A D ++ G D VV + R
Sbjct: 60 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLS 119
Query: 149 YGQFVALPKQLWVLDSVPGKVKT-----ENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMM 203
+ D+ +V + G + L L + R V +
Sbjct: 120 SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRV 179
Query: 204 ELGFSKSLSEWIGTNLKKSGERE---TWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260
S + + + + E A + S E +
Sbjct: 180 SKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPT 239
Query: 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAP 320
+++AE + L GL + +P GH + L E++
Sbjct: 240 LVIQAEHDPIAPAPHGKHLAGLIPT--------ARLAEIPGMGHALPSSVHGPLAEVILA 291
Query: 321 RIAS 324
S
Sbjct: 292 HTRS 295
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 53.3 bits (126), Expect = 1e-08
Identities = 26/277 (9%), Positives = 71/277 (25%), Gaps = 19/277 (6%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
HG S WR+ + A R++ DL G S +++ P
Sbjct: 34 QHGNPTSSYLWRNIMPHCAGL---------GRLIACDLIGMGDSDKLDPSGPERYAYAEH 84
Query: 110 NDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168
D + + V ++ H G + +A+ G + + + +
Sbjct: 85 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPE 144
Query: 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETW 228
+ + + + L + + + L ++ + R T
Sbjct: 145 QDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTL 204
Query: 229 AFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGD 288
++ + + + + + ++
Sbjct: 205 SWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPN--- 261
Query: 289 GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
+ H++ D+P + +A + +
Sbjct: 262 ------QTEITVAGAHFIQEDSPDEIGAAIAAFVRRL 292
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 52.2 bits (123), Expect = 2e-08
Identities = 48/298 (16%), Positives = 95/298 (31%), Gaps = 36/298 (12%)
Query: 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRM 82
TTR + Y++ S HG + +W S LA+ +R+
Sbjct: 4 TTRDGTQIYYKDWGSGQ------PIVFSHGWPLNADSWESQMIFLAA--------QGYRV 49
Query: 83 VLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVA-LHFA 141
+ D R HGRS++ + A+ DLA L++ + + GG+VA
Sbjct: 50 IAHDRRGHGRSSQPWSGNDMDTYAD---DLAQLIEHLDLRDAVLFGFSTGGGEVARYIGR 106
Query: 142 QSCARADYGQFVALPKQLWV-LDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200
AR ++ L + ++ PG + E +G + L L + S +
Sbjct: 107 HGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGF 166
Query: 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260
+ S + +W +G + + A + ++ + G
Sbjct: 167 NQPGAKSSAGMVDWFWLQGMAAGHKNAYDCI--KAFSETDFTEDLKKIDVPTLVVHGDAD 224
Query: 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+V E S +++ + + A H + + L +
Sbjct: 225 QVVPIEASGIASAALVKGST---------------LKIYSGAPHGLTDTHKDQLNADL 267
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 51.1 bits (120), Expect = 5e-08
Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 38/291 (13%)
Query: 35 VRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA 94
+ ++ P ++HGLLGSG +W+ +LA ++ + +DL HG +
Sbjct: 10 AKPTARTP---LVVLVHGLLGSGADWQPVLSHLAR--------TQCAALTLDLPGHGTNP 58
Query: 95 EIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVA 154
E + + + P +++G+S+GG++ +H A
Sbjct: 59 ERHCDNFAE---AVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGL-----AQGAFSRL 110
Query: 155 LPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEW 214
+ + G + EK + + + + H++ + +++
Sbjct: 111 NLRGAIIEGGHFG------LQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSS 164
Query: 215 IGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPD 274
+ +++ + A M + LL + D
Sbjct: 165 LNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDS---- 220
Query: 275 VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325
Q+L + +S + AGH VH + P+ +IV I S+
Sbjct: 221 KFQQLAESSG---------LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 51.3 bits (122), Expect = 5e-08
Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 17/104 (16%)
Query: 43 YTSTAF---VLHGLLGSGRNWRSFS-RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98
YT T + + HG+LG + S L ++ + ++ S
Sbjct: 3 YTQTKYPIVLAHGMLGFDNILGVDYWFGIPSAL----RRDGAQVYVTEVSQLDTS----- 53
Query: 99 LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
+ +V G +IGHS GG + A
Sbjct: 54 ---EVRGEQLLQQVEEIVALSGQ-PKVNLIGHSHGGPTIRYVAA 93
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 48.8 bits (114), Expect = 3e-07
Identities = 28/269 (10%), Positives = 68/269 (25%), Gaps = 24/269 (8%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG G +W +R L + +R++ D R G S+++ A
Sbjct: 29 IHGYPLDGHSWERQTRELLA--------QGYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+ + + + +G + + P + D+ G
Sbjct: 81 HTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVP 140
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+ +V +++ + + ++L I
Sbjct: 141 Q---------EVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIG 191
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
A + ++ E + G I+ K + D R +
Sbjct: 192 SAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARR--FHQAVPE- 248
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ A H + + + +
Sbjct: 249 ----ADYVEVEGAPHGLLWTHADEVNAAL 273
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 49.1 bits (115), Expect = 3e-07
Identities = 36/281 (12%), Positives = 69/281 (24%), Gaps = 39/281 (13%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
++HG +G W + + + ++D GRSA +
Sbjct: 62 TLIHGCCLTGMTWETTPDGRMGWD-EYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK 120
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
A L G + F + QF + VP
Sbjct: 121 APASS--LPDLFAAGHEAAWAIFRFGPRYPDAFKDT-------QFPVQAQAELWQQMVPD 171
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
S+P+ V ++ +L + + + +T
Sbjct: 172 --------------------WLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQT 211
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG------ 281
A N G + + P P + + +V + + + +
Sbjct: 212 AAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDA 271
Query: 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322
L G G + + H + D VA I
Sbjct: 272 LNAAGGKGQLMSLPALGVHGNSHMMMQDRNN---LQVADLI 309
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (114), Expect = 3e-07
Identities = 50/324 (15%), Positives = 93/324 (28%), Gaps = 52/324 (16%)
Query: 12 LNLLTRFLN--SPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLAS 69
+NL + +N PT L + SS+RP F++H + GS + S + L+
Sbjct: 1 VNLRSLLVNPEGPTLMRLNS------VQSSERPL----FLVHPIEGSTTVFHSLASRLS- 49
Query: 70 TLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIG 129
+ P I + A + ++ + P V G
Sbjct: 50 ----------IPTYGLQCTRAA---------PLDSIHSLAAYYIDCIRQVQPEGPYRVAG 90
Query: 130 HSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189
+S G VA Q A +S+ + + + +
Sbjct: 91 YSYGACVAFEMCS--------QLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPG 142
Query: 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249
+ + ++ + + L G E A +D ++
Sbjct: 143 CEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSF 202
Query: 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSE---------GKVSVHVLP 300
+ A K+ + ++ R + D GKVSVHV+
Sbjct: 203 AARSFYYKLRAAEQYTPKAKYYGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIE 262
Query: 301 NAGHWVHVDNPKGLLEIVAPRIAS 324
H ++ LE + I S
Sbjct: 263 -GDHRTLLEGSG--LESIISIIHS 283
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (113), Expect = 5e-07
Identities = 44/290 (15%), Positives = 79/290 (27%), Gaps = 24/290 (8%)
Query: 50 LHGLLGSGRNWRSFSRNLAS-----------TLSQTSASSEWRMVLVDLRNHGRSAEIEG 98
HG S +WR LA ++SA E +++ ++
Sbjct: 38 CHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK 97
Query: 99 LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQ 158
L + + LV +P+ V + A
Sbjct: 98 LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLN-TPFIPANPNMSPLESIKANPVFD 156
Query: 159 LWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTN 218
+ PG + E + ++ S+ S + S
Sbjct: 157 YQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMV 216
Query: 219 LKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA----IVRAEKSDRWDPD 274
++ + F G N YR M G +I +V AEK P
Sbjct: 217 TEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQ 276
Query: 275 VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
+ Q +E + + + GHW +D P + +I+ + S
Sbjct: 277 MSQHMEDWIPH--------LKRGHIEDCGHWTQMDKPTEVNQILIKWLDS 318
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 48.0 bits (112), Expect = 5e-07
Identities = 34/269 (12%), Positives = 70/269 (26%), Gaps = 26/269 (9%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG SG +W S L + +R++ D R G+S++ A
Sbjct: 29 IHGFPLSGHSWERQSAALLD--------AGYRVITYDRRGFGQSSQPTTGYDYDTFAADL 80
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
N + + + G + + + P L D+ G
Sbjct: 81 NTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAA 140
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
E +G V V + + + + ++ + S+ G A
Sbjct: 141 PQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 200
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
+ L+ H G + E + R + E
Sbjct: 201 APTTWYTDFRADIPRIDVPALILH---GTGDRTLPIENTARVFHKALPSAE--------- 248
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ A H + + + + +
Sbjct: 249 ------YVEVEGAPHGLLWTHAEEVNTAL 271
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 47.2 bits (110), Expect = 8e-07
Identities = 30/275 (10%), Positives = 61/275 (22%), Gaps = 56/275 (20%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG G+ + R R L S + + HG E + D
Sbjct: 17 LHGFTGNSADVRMLGRFL--------ESKGYTCHAPIYKGHGVP-PEELVHTGPDDWWQD 67
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
V G S+GG +L + A
Sbjct: 68 VMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCA--------------- 112
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+ + + L +++ + G + ++ +
Sbjct: 113 ---------------------PMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKF 151
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
+V+A + +PD +
Sbjct: 152 KQTPMKTLKALQELIADVRD--HLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPV-- 207
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324
+ +GH + +D K + + I +
Sbjct: 208 ----KQIKWYEQSGHVITLDQEK---DQLHEDIYA 235
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 47.4 bits (111), Expect = 1e-06
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 14/108 (12%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP----- 102
F+ HGLL S NW S N + L+ A + + + L + R + + P
Sbjct: 62 FLQHGLLASATNWISNLPNNS--LAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFW 119
Query: 103 ------HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144
+ + ++K G D +GHS G + +
Sbjct: 120 AFSFDEMAKYDLPATIDFILKKTGQD-KLHYVGHSQGTTIGFIAFSTN 166
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 46.1 bits (107), Expect = 2e-06
Identities = 32/271 (11%), Positives = 72/271 (26%), Gaps = 18/271 (6%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP--PHDIAN 107
LHG G W LA + +++ DLR G S + + D
Sbjct: 34 LHGWPGFWWEWSKVIGPLAE---------HYDVIVPDLRGFGDSEKPDLNDLSKYSLDKA 84
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167
A + A L V + S F + + G
Sbjct: 85 ADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLG 144
Query: 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERET 227
V + + S +K+ + + L + +
Sbjct: 145 HVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKP 204
Query: 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQG 287
+ N + + W L+H + + ++ + +
Sbjct: 205 DNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEF--VPKYYS 262
Query: 288 DGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ ++ + + GH++ V+ P+ ++ +
Sbjct: 263 N-----YTMETIEDCGHFLMVEKPEIAIDRI 288
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 45.7 bits (106), Expect = 3e-06
Identities = 39/299 (13%), Positives = 83/299 (27%), Gaps = 37/299 (12%)
Query: 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRM 82
TTR + Y++ +HG +G W+ + + + +R
Sbjct: 4 TTRDGVEIFYKDWGQGR------PVVFIHGWPLNGDAWQDQLKAV--------VDAGYRG 49
Query: 83 VLVDLRNHGRSAEIEGLDPPHDIANA-ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141
+ D R HG S + A+ + L +L + G + V H
Sbjct: 50 IAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGT 109
Query: 142 QSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201
A A+P + D P V E + VL + N
Sbjct: 110 GRLRSAVL--LSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANR 167
Query: 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261
+ + + ++ E + A + ++ + + G +
Sbjct: 168 PGNKVTQGNKDAFWYMAMAQTIEGGVRCVD---AFGYTDFTEDLKKFDIPTLVVHGDDDQ 224
Query: 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV--DNPKGLLEIV 318
+V + + R +I E + V + H + + + + +
Sbjct: 225 VVPIDATGRKSAQIIPNAE---------------LKVYEGSSHGIAMVPGDKEKFNRDL 268
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 44.0 bits (102), Expect = 9e-06
Identities = 30/269 (11%), Positives = 82/269 (30%), Gaps = 33/269 (12%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG + ++ + + S +R++ D+ G + + + ++
Sbjct: 29 IHGSGPGVSAYANWRLTIPA------LSKFYRVIAPDMVGFGFTDRP---ENYNYSKDSW 79
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
D + ++G++ GG +A+ A + ++ ++ + +
Sbjct: 80 VDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVD--------RMVLMGAAGTRF 131
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
V ++++ + + L+ + G +E+++
Sbjct: 132 DVTEGLNAVWGYTPSIEN-----MRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFS 186
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
Q + S + P + + I+ + RL L +R
Sbjct: 187 SMFPEPRQRWIDALASSDEDIKTLPNETL---IIHGREDQVVPLSSSLRLGELIDR---- 239
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+HV GHW ++ +V
Sbjct: 240 ----AQLHVFGRCGHWTQIEQTDRFNRLV 264
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 43.7 bits (101), Expect = 1e-05
Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 28/269 (10%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
HG L W L+S +R + D R GRS + +D A
Sbjct: 25 SHGWLLDADMWEYQMEYLSS--------RGYRTIAFDRRGFGRSDQP---WTGNDYDTFA 73
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
+D+A L++ +V G AR A L +L +V
Sbjct: 74 DDIAQLIEHLDLKEVTLVGFSMGG--------GDVARYIARHGSARVAGLVLLGAVTPLF 125
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+ + + + + R ++ + + + + ++ +
Sbjct: 126 GQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALL 185
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
+L V ++ E + P + + ++ + + ++ A G
Sbjct: 186 ASLKATVDCVTAFAETDFRPDMAKID--VPTLVIHGDGDQIVPFETTGKV---AAELIKG 240
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+E + V +A H V + + L E +
Sbjct: 241 AE----LKVYKDAPHGFAVTHAQQLNEDL 265
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 43.4 bits (100), Expect = 2e-05
Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 21/303 (6%)
Query: 17 RFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSA 76
+L+ Y + +S LHG +R A
Sbjct: 23 NYLDDLPGYPGLRAHYLDEGNSDAED---VFLCLHGEPTWSYLYRKMIPV--------FA 71
Query: 77 SSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKV 136
S R++ D G + +D + + + ++ GG +
Sbjct: 72 ESGARVIAPDF--FGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFL 129
Query: 137 ALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRK 196
L + + + + P + + PS + +
Sbjct: 130 GLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQ 189
Query: 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256
++ L S + S + F A + +
Sbjct: 190 FMKRWAPTL-TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDW 248
Query: 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLE 316
+ + K PDV+ ++ L N G + +AGH+V + E
Sbjct: 249 NGQTFMAIGMKDKLLGPDVMYPMKALIN-------GCPEPLEIADAGHFVQEFGEQVARE 301
Query: 317 IVA 319
+
Sbjct: 302 ALK 304
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 43.0 bits (100), Expect = 2e-05
Identities = 22/184 (11%), Positives = 53/184 (28%), Gaps = 11/184 (5%)
Query: 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVL-HGLLGSGRNWRSFSRNLASTLSQTSASSEWR 81
+ Q L E + P+ + ++ G ++ + L++ + +
Sbjct: 10 RVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST--------NGFH 61
Query: 82 MVLVDLRNHGRSAEIEGLD-PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHF 140
+ D +H + + N+ + + ++ KG +I S+ +VA
Sbjct: 62 VFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQ-NIGLIAASLSARVAYEV 120
Query: 141 AQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200
+ V + L+ G E+ L S +
Sbjct: 121 ISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFE 180
Query: 201 HMME 204
H +
Sbjct: 181 HHWD 184
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 42.5 bits (98), Expect = 3e-05
Identities = 36/269 (13%), Positives = 74/269 (27%), Gaps = 28/269 (10%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG W ++ RN+ + +R++L D +S + + + A
Sbjct: 36 LHGGGPGAGGWSNYYRNVGPFVDA-----GYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
D D+ H +G + A + A + L + + G
Sbjct: 91 VK-------GLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKL---ILMGPGGLGPS 140
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
E K+L L + PS ++ L + + +
Sbjct: 141 MFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKN 200
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
F + +++ + ++ I D +L +
Sbjct: 201 FLISAQKAPLSTWDVTARLGEIKAK-----TFITWGRDDRFVPLDHGLKLLWNIDD---- 251
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+HV GHW ++ +V
Sbjct: 252 ----ARLHVFSKCGHWAQWEHADEFNRLV 276
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 42.4 bits (99), Expect = 4e-05
Identities = 15/112 (13%), Positives = 29/112 (25%), Gaps = 19/112 (16%)
Query: 34 EVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS 93
+ +S + ++ G +G F N +Q + + +
Sbjct: 21 TCQGASPSSVSKPILLVPGTGTTGPQS--FDSNWIPLSTQLG----YTPCWISPPPFMLN 74
Query: 94 AEIEGLDPPHDIANAANDLANLVKAKGWDWPD---VVIGHSMGGKVALHFAQ 142
D + N + A + V+ S GG VA
Sbjct: 75 ----------DTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLT 116
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 41.7 bits (96), Expect = 6e-05
Identities = 47/311 (15%), Positives = 82/311 (26%), Gaps = 45/311 (14%)
Query: 16 TRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTS 75
L TL +E+ + +P +LHG G G N + + +
Sbjct: 13 QGSL---KVDDRHTLYFEQCGNPHGKP----VVMLHGGPGGGCNDKMRRFHDPA------ 59
Query: 76 ASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGK 135
++R+VL D R GRS + + D+ L G D V S G
Sbjct: 60 ---KYRIVLFDQRGSGRSTPHAD-LVDNTTWDLVADIERLRTHLGVDRWQVFG-GSWGST 114
Query: 136 VALHFAQ-------SCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188
+AL +AQ + + + L
Sbjct: 115 LALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADL 174
Query: 189 PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYW 248
S+ R + L +K+ S W G + + + D + + E Y+
Sbjct: 175 MSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYF 234
Query: 249 PLLEHPPQGMEIA------------IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSV 296
++ IV L + +
Sbjct: 235 VNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK--------AQL 286
Query: 297 HVLPNAGHWVH 307
+ P +GH
Sbjct: 287 QISPASGHSAF 297
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.4 bits (97), Expect = 7e-05
Identities = 13/108 (12%), Positives = 34/108 (31%), Gaps = 6/108 (5%)
Query: 49 VLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108
+ HG+ S N S + + + ++ +++ R ++ +
Sbjct: 10 IWHGMGDSCCNPLSM-GAIKKMVEK--KIPGIHVLSLEIGKTLREDVENSFF--LNVNSQ 64
Query: 109 ANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVAL 155
+ ++ +G S GG+ AQ C +++
Sbjct: 65 VTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISV 112
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 40.3 bits (92), Expect = 2e-04
Identities = 31/303 (10%), Positives = 67/303 (22%), Gaps = 32/303 (10%)
Query: 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRM 82
TT + Y++ P HG S +W + S +R+
Sbjct: 4 TTSDGTNIFYKDWGPRDGLP----VVFHHGWPLSADDWDNQMLFFLS--------HGYRV 51
Query: 83 VLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142
+ D R HGRS + A + +
Sbjct: 52 IAHDRRGHGRSDQPSTGHDMDTYAA-----------DVAALTEALDLRGAVHIGHSTGGG 100
Query: 143 SCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202
AR + ++ +VP + +
Sbjct: 101 EVARYVARAEPGRVAKAVLVSAVP-----PVMVKSDTNPDGLPLEVFDEFRAALAANRAQ 155
Query: 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262
+ + + L G + N++ E ++
Sbjct: 156 FYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYEC--IAAFSETDFTDDLKR 213
Query: 263 VRAEKSDRW-DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321
+ D + A + + ++ H + +P+ L +
Sbjct: 214 IDVPVLVAHGTDDQVVPYADAAPKSAELLAN-ATLKSYEGLPHGMLSTHPEVLNPDLLAF 272
Query: 322 IAS 324
+ S
Sbjct: 273 VKS 275
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 39.9 bits (91), Expect = 3e-04
Identities = 27/269 (10%), Positives = 70/269 (26%), Gaps = 25/269 (9%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
LHG ++ R + L++ + +V DL G+S E
Sbjct: 32 LHGAGPGAHAASNW-RPIIPDLAE-----NFFVVAPDLIGFGQSEYPETYPGHIMSWVGM 85
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169
L + I + G A + + + +++ P ++
Sbjct: 86 RVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPEL 145
Query: 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWA 229
+ ++ + + S + + + ++ + E+
Sbjct: 146 ARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMK 205
Query: 230 FNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289
++ V + + + L + + D L
Sbjct: 206 AGMESLVIPPATLGRLPHDVL-----------VFHGRQDRIVPLDTSLYLTKHLKH---- 250
Query: 290 SEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318
+ VL GHW ++ + ++
Sbjct: 251 ----AELVVLDRCGHWAQLERWDAMGPML 275
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 38.2 bits (88), Expect = 7e-04
Identities = 21/121 (17%), Positives = 32/121 (26%), Gaps = 21/121 (17%)
Query: 48 FVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105
G + + L + V + P +
Sbjct: 46 ICCAGTAAISGPHEFTRLAGALRG---------IAPVRAVPQPGYEEGEP-----LPSSM 91
Query: 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165
A A A+ V D P VV GHS G +A A P+ + ++D
Sbjct: 92 AAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRG-----HPPRGVVLIDVY 146
Query: 166 P 166
P
Sbjct: 147 P 147
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 36.7 bits (84), Expect = 8e-04
Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 80 WRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALH 139
+ L+DL +GR+ P A+ +A V+ +G + H
Sbjct: 42 YAFYLLDLPGYGRTE-----GPRMAPEELAHFVAGFAVMMNL-GAPWVLLRGLGLALGPH 95
Query: 140 FAQSCARADYGQFV 153
RA + V
Sbjct: 96 LEALGLRALPAEGV 109
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 37.8 bits (86), Expect = 0.001
Identities = 37/319 (11%), Positives = 80/319 (25%), Gaps = 26/319 (8%)
Query: 15 LTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQT 74
L F T T+ + + S +R +LHG GS + + T
Sbjct: 79 LNSFPQFTTEIEGLTIHFAALFS--EREDAVPIALLHGWPGSFVEFYPILQLFRE--EYT 134
Query: 75 SASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGG 134
+ + +V+ L + S+ D + + A + L+K + I
Sbjct: 135 PETLPFHLVVPSLPGYTFSSGPPL-DKDFGLMDNARVVDQLMK--DLGFGSGYIIQGGDI 191
Query: 135 KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPS 194
+ + P +E E ++ + +
Sbjct: 192 GSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAM 251
Query: 195 RKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHP 254
+ S S + +K + + ++M + Y +P H
Sbjct: 252 EHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHT 311
Query: 255 PQGMEIAIVRAEKSDRWDP---------------DVIQRLEGLANRQGDGSEGKVSVHVL 299
+ + D+ G+ V
Sbjct: 312 YRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPRSWIATTGNL----VFFRDH 367
Query: 300 PNAGHWVHVDNPKGLLEIV 318
GH+ ++ P+ L +
Sbjct: 368 AEGGHFAALERPRELKTDL 386
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 36.4 bits (83), Expect = 0.002
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 16/121 (13%)
Query: 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109
+HG+ G+ N+ L S W + + ++ +
Sbjct: 8 VHGIGGASFNFAGIKSYL--------VSQGWSRDKLYAVDFWDKTG----TNYNNGPVLS 55
Query: 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADY-GQFVAL--PKQLWVLDSVP 166
+ ++ G ++ HSMGG L++ ++ + V L +L ++P
Sbjct: 56 RFVQKVLDETGAKKV-DIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALP 114
Query: 167 G 167
G
Sbjct: 115 G 115
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 36.6 bits (83), Expect = 0.002
Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 25/106 (23%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
F +LG G +++ S L +++ D
Sbjct: 21 FAFPPVLGYGLMYQNLSSRL----------PSYKLCAFDFIEEEDRL------------- 57
Query: 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFV 153
+ A+L++ + P + G+S G +A A+
Sbjct: 58 --DRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQR 101
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.6 bits (83), Expect = 0.002
Identities = 16/122 (13%), Positives = 32/122 (26%), Gaps = 17/122 (13%)
Query: 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256
+ + S SLS + + F +
Sbjct: 97 DALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAANYASV------- 149
Query: 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLE 316
A++ D + L+ L N + V ++ AGH ++D P+
Sbjct: 150 -KTPALIVYGDQDPMGQTSFEHLKQLPNHR---------VLIMKGAGHPCYLDKPEEWHT 199
Query: 317 IV 318
+
Sbjct: 200 GL 201
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.003
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 9/133 (6%)
Query: 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87
Q L + E S + + +LHG+ S W++ A + +R V +DL
Sbjct: 16 QALFFREALPGSGQARF-SVLLLHGIRFSSETWQNLG------TLHRLAQAGYRAVAIDL 68
Query: 88 RNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARA 147
G S E P ++A + A P VVI S+ G +L F +
Sbjct: 69 PGLGHSKEAAAPAPIGELAPGSFLAAV--VDALELGPPVVISPSLSGMYSLPFLTAPGSQ 126
Query: 148 DYGQFVALPKQLW 160
G P
Sbjct: 127 LPGFVPVAPICTD 139
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 36.2 bits (82), Expect = 0.003
Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 6/109 (5%)
Query: 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107
+LHG G + F L + S + EG+ D+
Sbjct: 21 VLLHGTGGDENQFFDFGARLLPQATILSPVGDVSE---HGAARFFRRTGEGVYDMVDLER 77
Query: 108 AANDLANLVKAKGWDWPD---VVIGHSMGGKVALHFAQSCARADYGQFV 153
A +A+ +KA + + +G S G + + +
Sbjct: 78 ATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVL 126
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 325 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.97 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.97 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.96 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.93 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.92 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.92 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.92 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.92 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.92 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.92 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.91 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.89 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.88 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.88 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.88 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.88 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.83 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.83 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.81 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.8 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.8 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.8 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.79 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.79 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.78 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.78 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.77 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.75 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.74 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.74 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.72 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.7 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.59 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.59 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.58 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.55 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.52 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.5 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.47 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.4 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.39 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.37 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.27 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.21 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.21 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.18 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.16 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.13 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.12 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.98 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.94 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.91 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.91 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.8 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.8 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.79 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.63 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.59 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.33 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.52 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.45 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.44 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.42 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.28 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.9 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.86 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.72 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.61 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.57 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.55 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.51 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.47 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.41 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.38 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.63 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 94.98 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 94.77 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=9e-39 Score=262.73 Aligned_cols=265 Identities=16% Similarity=0.152 Sum_probs=174.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++.+|+|.++|++ ++|+|||+||++++...|. .++..|.+ +||+|+++|+||||.|+.+......++
T Consensus 8 g~~~i~y~~~G~~----~~p~vvl~HG~~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~~~~~~~ 75 (297)
T d1q0ra_ 8 GDVELWSDDFGDP----ADPALLLVMGGNLSALGWPDEFARRLAD--------GGLHVIRYDHRDTGRSTTRDFAAHPYG 75 (297)
T ss_dssp TTEEEEEEEESCT----TSCEEEEECCTTCCGGGSCHHHHHHHHT--------TTCEEEEECCTTSTTSCCCCTTTSCCC
T ss_pred CCEEEEEEEecCC----CCCEEEEECCCCcChhHHHHHHHHHHHh--------CCCEEEEEeCCCCcccccccccccccc
Confidence 5679999999963 5889999999999999885 46777776 899999999999999987654335689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
++++++|+..++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++....... ..........
T Consensus 76 ~~~~~~d~~~ll~~l~~~-~~~lvGhS~Gg~~a~~~a~~~P~--------~v~~lvli~~~~~~~~~---~~~~~~~~~~ 143 (297)
T d1q0ra_ 76 FGELAADAVAVLDGWGVD-RAHVVGLSMGATITQVIALDHHD--------RLSSLTMLLGGGLDIDF---DANIERVMRG 143 (297)
T ss_dssp HHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCTTCCH---HHHHHHHHHT
T ss_pred cchhhhhhcccccccccc-ceeeccccccchhhhhhhccccc--------ceeeeEEEccccccccc---hhhhHHHhhh
Confidence 999999999999999999 99999999999999999999999 99999999976433211 1111111111
Q ss_pred hhcCCCCCCcHHHHHHHHH-hhccch----hHHH------HHhhcccCCCcccccccChh-----------HHHHhhhcc
Q 020518 185 LQSLPSSIPSRKWLVNHMM-ELGFSK----SLSE------WIGTNLKKSGERETWAFNLD-----------GAVQMFNSY 242 (325)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 242 (325)
.................+. ...... .... .................... .........
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (297)
T d1q0ra_ 144 EPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTL 223 (297)
T ss_dssp CCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCC
T ss_pred hhhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhh
Confidence 1111110000111111110 000000 0000 00000000000000000000 000000111
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
...+....+.+++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||+++.|+|+++++.|.+||
T Consensus 224 ~~~~~~~~l~~i~--~Pvlvi~G~~D~~~~~~~~~~~~~~~p~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~~l 293 (297)
T d1q0ra_ 224 PPPSRAAELREVT--VPTLVIQAEHDPIAPAPHGKHLAGLIPT--------ARLAEIPGMGHALPSSVHGPLAEVILAHT 293 (297)
T ss_dssp CCGGGGGGGGGCC--SCEEEEEETTCSSSCTTHHHHHHHTSTT--------EEEEEETTCCSSCCGGGHHHHHHHHHHHH
T ss_pred ccccchhhhhccC--CceEEEEeCCCCCCCHHHHHHHHHhCCC--------CEEEEECCCCCcchhhCHHHHHHHHHHHH
Confidence 1223344555555 8999999999999999888888777765 99999999999999999999999999999
Q ss_pred hc
Q 020518 323 AS 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 294 ~~ 295 (297)
T d1q0ra_ 294 RS 295 (297)
T ss_dssp HH
T ss_pred Hh
Confidence 75
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.8e-38 Score=259.19 Aligned_cols=261 Identities=15% Similarity=0.147 Sum_probs=171.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+|+|++.|. +|+|||+||++.+...|..+...+...+. +||+|+++|+||||.|..+.. ..++.
T Consensus 18 ~~~~i~y~~~G~------G~~ivllHG~~~~~~~~~~~~~~l~~~~~-----~g~~v~~~D~~G~G~S~~~~~--~~~~~ 84 (283)
T d2rhwa1 18 SDFNIHYNEAGN------GETVIMLHGGGPGAGGWSNYYRNVGPFVD-----AGYRVILKDSPGFNKSDAVVM--DEQRG 84 (283)
T ss_dssp EEEEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHHH-----TTCEEEEECCTTSTTSCCCCC--SSCHH
T ss_pred CCEEEEEEEEcC------CCeEEEECCCCCChhHHHHHHHHHHHHHH-----CCCEEEEEeCCCCcccccccc--ccccc
Confidence 456899999885 68999999999999999876554443332 899999999999999988764 56778
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC--CchhHHHHHHH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE--NSEGEVEKVLQ 183 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~~~~~ 183 (325)
..+++++.+++++++++ +++++||||||.+++.+|.++|+ +|+++|++++.+...... ...........
T Consensus 85 ~~~~~~i~~li~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 155 (283)
T d2rhwa1 85 LVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEYPD--------RIGKLILMGPGGLGPSMFAPMPMEGIKLLFK 155 (283)
T ss_dssp HHHHHHHHHHHHHHTCC-CEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred chhhhhccccccccccc-ccccccccchHHHHHHHHHHhhh--------hcceEEEeCCCcCCcchhhhhhHHHHHHHHH
Confidence 88899999999999999 99999999999999999999999 999999999764332211 11111111111
Q ss_pred HhhcCCCCCCcHHHHHHHHHhh--ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 184 TLQSLPSSIPSRKWLVNHMMEL--GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
..... ............... ...+.............. ... ...............+....+..++ +|++
T Consensus 156 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~i~--~P~l 227 (283)
T d2rhwa1 156 LYAEP--SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQP-EHL---KNFLISAQKAPLSTWDVTARLGEIK--AKTF 227 (283)
T ss_dssp HHHSC--CHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCH-HHH---HHHHHHHHHSCGGGGCCGGGGGGCC--SCEE
T ss_pred Hhhhh--hhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhh-hhh---hhhhhhhhhhhccccchHHHHhhCC--CCEE
Confidence 11110 000000001111000 000000000000000000 000 0000000011112223344555555 8999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||+.
T Consensus 228 ii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 228 ITWGRDDRFVPLDHGLKLLWNIDD--------ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp EEEETTCSSSCTHHHHHHHHHSSS--------EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcCHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 999999999999888888777765 9999999999999999999999999999974
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=3.5e-38 Score=255.23 Aligned_cols=252 Identities=15% Similarity=0.231 Sum_probs=167.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|.+++|.+.|+ +|+|||+||++++... |..+++.|+ ++|+|+++|+||||.|+.+. ..
T Consensus 10 dg~~l~y~~~G~------g~~vvllHG~~~~~~~~~~~~~~~~~l~---------~~~~v~~~D~~G~G~S~~~~---~~ 71 (268)
T d1j1ia_ 10 GGVETRYLEAGK------GQPVILIHGGGAGAESEGNWRNVIPILA---------RHYRVIAMDMLGFGKTAKPD---IE 71 (268)
T ss_dssp TTEEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHT---------TTSEEEEECCTTSTTSCCCS---SC
T ss_pred CCEEEEEEEEcC------CCeEEEECCCCCCccHHHHHHHHHHHHh---------cCCEEEEEcccccccccCCc---cc
Confidence 689999999886 5789999999987654 666777776 78999999999999998865 57
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
++.+++++++.+++++++.+.+++++||||||.+++.+|.++|+ +|+++|++++++......... .
T Consensus 72 ~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~---~--- 137 (268)
T d1j1ia_ 72 YTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSE--------LVNALVLMGSAGLVVEIHEDL---R--- 137 (268)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGG--------GEEEEEEESCCBCCCC------------
T ss_pred cccccccccchhhHHHhhhcccceeeeccccccccchhhccChH--------hhheeeecCCCccccccchhh---h---
Confidence 89999999999999999986589999999999999999999999 999999999864332211000 0
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccch---hHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSK---SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
.+................+....... ........... ......+ ...................+..++ +|
T Consensus 138 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~--~P 210 (268)
T d1j1ia_ 138 -PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATD-EATRKAY---VATMQWIREQGGLFYDPEFIRKVQ--VP 210 (268)
T ss_dssp -----CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHS-HHHHHHH---HHHHHHHHHHTSSBCCHHHHTTCC--SC
T ss_pred -hhhhhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhh-hhhhhhh---hhhhhhhhccccccchhhhHhhCC--CC
Confidence 00000000000000000000000000 00000000000 0000000 000111111111122223445554 89
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||.+
T Consensus 211 ~l~i~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 211 TLVVQGKDDKVVPVETAYKFLDLIDD--------SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCTT--------EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 99999999999999888888887766 9999999999999999999999999999964
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.7e-38 Score=260.09 Aligned_cols=257 Identities=15% Similarity=0.180 Sum_probs=175.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|+|.+.|++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..+++
T Consensus 15 ~g~~i~y~~~G~~----~~p~lvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~d~~G~G~S~~~~---~~~~~ 78 (291)
T d1bn7a_ 15 LGERMHYVDVGPR----DGTPVLFLHGNPTSSYLWRNIIPHVA---------PSHRCIAPDLIGMGKSDKPD---LDYFF 78 (291)
T ss_dssp TTEEEEEEEESCS----SSSCEEEECCTTCCGGGGTTTHHHHT---------TTSCEEEECCTTSTTSCCCS---CCCCH
T ss_pred CCEEEEEEEeCCC----CCCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEEeCCCCccccccc---cccch
Confidence 6789999999863 57899999999999999999999987 79999999999999998865 58899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++.+++++++.+ +++++||||||.+++.++.++|+ ++++++++++....................+
T Consensus 79 ~~~~~~l~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
T d1bn7a_ 79 DDHVRYLDAFIEALGLE-EVVLVIHDWGSALGFHWAKRNPE--------RVKGIACMEFIRPIPTWDEWPEFARETFQAF 149 (291)
T ss_dssp HHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHHHHHHCGG--------GEEEEEEEEECCCBCSGGGSCHHHHHHHHHH
T ss_pred hHHHHHHhhhhhhhccc-cccccccccccchhHHHHHhCCc--------ceeeeeeeccccCCccchhhhhhhhhHHHHH
Confidence 99999999999999999 99999999999999999999999 9999999997654332222211111111111
Q ss_pred hcCCC---CCCcHHHHHHHHHh----hccchhH-HHHHhhcccCCCcccccccChhHHHHhhhcccCC-----------c
Q 020518 186 QSLPS---SIPSRKWLVNHMME----LGFSKSL-SEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM-----------S 246 (325)
Q Consensus 186 ~~~~~---~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 246 (325)
..... .............. ....... ..+......... .............. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (291)
T d1bn7a_ 150 RTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVD--------REPLWRFPNEIPIAGEPANIVALVEA 221 (291)
T ss_dssp TSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGG--------GHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred hhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhh--------hHHHHHHHHHhhhhhhhchhhhhhhh
Confidence 10000 00000000000000 0001111 111111000000 00000000000000 0
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
....+..++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||+++
T Consensus 222 ~~~~~~~i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 222 YMNWLHQSP--VPKLLFWGTPGVLIPPAEAARLAESLPN--------CKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHCC--SCEEEEEEEECSSSCHHHHHHHHHHSTT--------EEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hhhhhhcCC--CCEEEEEeCCCCCcCHHHHHHHHHHCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 111223343 8999999999999999988888887776 99999999999999999999999999999874
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=6.2e-37 Score=249.80 Aligned_cols=260 Identities=15% Similarity=0.198 Sum_probs=168.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC--
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-- 100 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-- 100 (325)
+..+++|...|++ ++|+|||+||++++... |..+++.|+ ++|+|+++|+||||.|+.+....
T Consensus 12 ~~~~~h~~~~G~~----~~p~ivllHG~~~~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~~~~~~~ 78 (281)
T d1c4xa_ 12 GTLASHALVAGDP----QSPAVVLLHGAGPGAHAASNWRPIIPDLA---------ENFFVVAPDLIGFGQSEYPETYPGH 78 (281)
T ss_dssp TTSCEEEEEESCT----TSCEEEEECCCSTTCCHHHHHGGGHHHHH---------TTSEEEEECCTTSTTSCCCSSCCSS
T ss_pred CCEEEEEEEEecC----CCCEEEEECCCCCCCcHHHHHHHHHHHHh---------CCCEEEEEeCCCCcccccccccccc
Confidence 4578999999873 68999999999886654 677788887 78999999999999998765310
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 101 PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
..++++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+....... .....
T Consensus 79 ~~~~~~~~~~~i~~~i~~~~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvli~~~~~~~~~~~--~~~~~ 147 (281)
T d1c4xa_ 79 IMSWVGMRVEQILGLMNHFGIE-KSHIVGNSMGGAVTLQLVVEAPE--------RFDKVALMGSVGAPMNARP--PELAR 147 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSSCCSSCC--HHHHH
T ss_pred chhhHHHhhhhccccccccccc-cceeccccccccccccccccccc--------cccceEEeccccCccccch--hHHHH
Confidence 1135678899999999999999 99999999999999999999999 9999999998654332211 11121
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhhccc----hhHHHHHhhcccCCCcccccccChhHHHHhhhccc-CCcccccccCCC
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMELGFS----KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR-EMSYWPLLEHPP 255 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 255 (325)
....... .........+...... .................................+. .......+.+++
T Consensus 148 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 222 (281)
T d1c4xa_ 148 LLAFYAD-----PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLP 222 (281)
T ss_dssp HHTGGGS-----CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCC
T ss_pred HHHhhhh-----cccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhc
Confidence 1111110 0000011111100000 00000000000000000000000000001111111 111223345554
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||++
T Consensus 223 --~P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 223 --HDVLVFHGRQDRIVPLDTSLYLTKHLKH--------AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp --SCEEEEEETTCSSSCTHHHHHHHHHCSS--------EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred --cceEEEEeCCCCCcCHHHHHHHHHHCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 8999999999999999888888877765 9999999999999999999999999999985
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=7.4e-38 Score=253.73 Aligned_cols=252 Identities=14% Similarity=0.188 Sum_probs=169.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChH---HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR---SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 101 (325)
.+|.+++|++.|. +|||||+||++++...|. .+++.|+ ++|+|+++|+||||.|..+.. .
T Consensus 10 ~~G~~~~Y~~~G~------G~pvvllHG~~~~~~~~~~~~~~~~~l~---------~~~~vi~~Dl~G~G~S~~~~~--~ 72 (271)
T d1uk8a_ 10 AAGVLTNYHDVGE------GQPVILIHGSGPGVSAYANWRLTIPALS---------KFYRVIAPDMVGFGFTDRPEN--Y 72 (271)
T ss_dssp ETTEEEEEEEECC------SSEEEEECCCSTTCCHHHHHTTTHHHHT---------TTSEEEEECCTTSTTSCCCTT--C
T ss_pred ECCEEEEEEEEee------CCeEEEECCCCCCccHHHHHHHHHHHHh---------CCCEEEEEeCCCCCCcccccc--c
Confidence 4788999999986 679999999998776654 4566665 799999999999999988765 6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 102 PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
.++.+++++++..++++++.+ +++++||||||.+++.+|.++|+ +++++|++++.+....... .....
T Consensus 73 ~~~~~~~~~~~~~~~~~l~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~~~~lil~~~~~~~~~~~~---~~~~~ 140 (271)
T d1uk8a_ 73 NYSKDSWVDHIIGIMDALEIE-KAHIVGNAFGGGLAIATALRYSE--------RVDRMVLMGAAGTRFDVTE---GLNAV 140 (271)
T ss_dssp CCCHHHHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCSCCCCCH---HHHHH
T ss_pred cccccccchhhhhhhhhhcCC-CceEeeccccceeehHHHHhhhc--------cchheeecccCCCcccchh---hhhhh
Confidence 788999999999999999999 99999999999999999999999 9999999998654332211 01100
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhh-----ccchhHHHHHhhcccCCCcccc-cccChhHHHHhhhcccCCcccccccCCC
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMEL-----GFSKSLSEWIGTNLKKSGERET-WAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
.... ............. ...................... .............. .......+..++
T Consensus 141 ----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~ 211 (271)
T d1uk8a_ 141 ----WGYT---PSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDA--LASSDEDIKTLP 211 (271)
T ss_dssp ----HTCC---SCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHH--HCCCHHHHTTCC
T ss_pred ----hhcc---chhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhh--ccccHHHHHhhc
Confidence 0000 0111111111000 0001111100000000000000 00000000000000 011223445554
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 212 --~P~lii~G~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 212 --NETLIIHGREDQVVPLSSSLRLGELIDR--------AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp --SCEEEEEETTCSSSCHHHHHHHHHHCTT--------EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred --cceeEEecCCCCCcCHHHHHHHHHhCCC--------CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 8999999999999999988888888776 9999999999999999999999999999974
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.9e-38 Score=257.67 Aligned_cols=253 Identities=19% Similarity=0.206 Sum_probs=175.0
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
++.||.+|+|.++|+. ++|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|..+. ..
T Consensus 4 ~~~dG~~l~y~~~G~~----~~~~vv~lHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~s~~~~---~~ 68 (275)
T d1a88a_ 4 TTSDGTNIFYKDWGPR----DGLPVVFHHGWPLSADDWDNQMLFFLS--------HGYRVIAHDRRGHGRSDQPS---TG 68 (275)
T ss_dssp ECTTSCEEEEEEESCT----TSCEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SC
T ss_pred EecCCCEEEEEEecCC----CCCeEEEECCCCCCHHHHHHHHHHHHh--------CCCEEEEEeccccccccccc---cc
Confidence 4578999999999973 578999999999999999999999977 89999999999999998765 57
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeCh-hHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC-Cc-----h
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSM-GGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE-NS-----E 175 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~-Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~-~~-----~ 175 (325)
++++++++|+.+++++++.+ +++++|||+ ||.+++.+|.++|+ +|+++|++++.+...... .. .
T Consensus 69 ~~~~~~~~~~~~~l~~l~~~-~~~~vg~s~~G~~~~~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~ 139 (275)
T d1a88a_ 69 HDMDTYAADVAALTEALDLR-GAVHIGHSTGGGEVARYVARAEPG--------RVAKAVLVSAVPPVMVKSDTNPDGLPL 139 (275)
T ss_dssp CSHHHHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHSCTT--------SEEEEEEESCCCSCCBCBTTBTTSBCH
T ss_pred cccccccccccccccccccc-ccccccccccccchhhcccccCcc--------hhhhhhhhcccccccccchhhhhhhhh
Confidence 89999999999999999999 999999997 67778888999999 999999999764333111 10 1
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhcc----------chhH-HHHHhhcccCCCcccccccChhHHHHhhhcccC
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGF----------SKSL-SEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE 244 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (325)
.........+.. .............. .... ..+... ...............+..
T Consensus 140 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 204 (275)
T d1a88a_ 140 EVFDEFRAALAA------NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQ---------GMMGAANAHYECIAAFSE 204 (275)
T ss_dssp HHHHHHHHHHHH------CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHH---------HHHSCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhh------hhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHh---------hcccchHHHHHHHHHhhh
Confidence 111111111100 00000000000000 0000 000000 000011222222223333
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.+....+.+++ +|+++|+|++|.+++.. ..+.+.+..++ +++++++++||++++|+|++|++.|.+||+
T Consensus 205 ~~~~~~l~~i~--~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 205 TDFTDDLKRID--VPVLVAHGTDDQVVPYADAAPKSAELLAN--------ATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp CCCHHHHHHCC--SCEEEEEETTCSSSCSTTTHHHHHHHSTT--------EEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred hhhhHHHHhhc--cccceeecCCCCCcCHHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 44455556555 89999999999999874 44556666665 999999999999999999999999999998
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 275 s 275 (275)
T d1a88a_ 275 S 275 (275)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=7.7e-37 Score=248.01 Aligned_cols=256 Identities=16% Similarity=0.238 Sum_probs=172.9
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
++.||.+|+|.+.|. +++|||+||+++++..|..+++.|.+ +||+|+++|+||||.|+.+. ..
T Consensus 4 ~t~dG~~l~y~~~G~------g~~ivlvHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~ 66 (274)
T d1a8qa_ 4 TTRDGVEIFYKDWGQ------GRPVVFIHGWPLNGDAWQDQLKAVVD--------AGYRGIAHDRRGHGHSTPVW---DG 66 (274)
T ss_dssp ECTTSCEEEEEEECS------SSEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SC
T ss_pred ECcCCCEEEEEEECC------CCeEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEEeCCCCccccccc---cc
Confidence 456899999999985 67899999999999999999999987 89999999999999998876 57
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCC--CchhHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTE--NSEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~ 179 (325)
++..++++|+.+++++++.+ +++++||||||.+++.+++++ |+ +|++++++++.+...... .......
T Consensus 67 ~~~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~~~~~~~a~~~p~--------~v~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (274)
T d1a8qa_ 67 YDFDTFADDLNDLLTDLDLR-DVTLVAHSMGGGELARYVGRHGTG--------RLRSAVLLSAIPPVMIKSDKNPDGVPD 137 (274)
T ss_dssp CSHHHHHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCCSSCTTSBCH
T ss_pred ccchhhHHHHHHHHHHhhhh-hhcccccccccchHHHHHHHhhhc--------cceeEEEEeccCccchhhhhccchhhH
Confidence 89999999999999999999 999999999999999877665 77 999999999764333211 1111111
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcc---------cccccChhHHHHhhhcccCCccccc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGER---------ETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
.....+..... ......... ....+........... ................+...+....
T Consensus 138 ~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
T d1a8qa_ 138 EVFDALKNGVL--TERSQFWKD--------TAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTED 207 (274)
T ss_dssp HHHHHHHHHHH--HHHHHHHHH--------HHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHhhhh--hhhHHHhhh--------hhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHH
Confidence 11111000000 000000000 0001111000000000 0000112222222223333444555
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCccccc--cChHHHHHHHHHHHhc
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV--DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--e~p~~~~~~i~~fl~~ 324 (325)
+..++ +|+++|+|++|..++++. .+.+.+.+++ +++++++++||++++ ++|++|++.|.+||++
T Consensus 208 l~~i~--~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 208 LKKFD--IPTLVVHGDDDQVVPIDATGRKSAQIIPN--------AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HTTCC--SCEEEEEETTCSSSCGGGTHHHHHHHSTT--------CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHhcc--ceeeeeccCCCCCcCHHHHHHHHHHhCCC--------CEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 66665 899999999999998754 4556666665 999999999999887 5699999999999974
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-37 Score=258.22 Aligned_cols=268 Identities=19% Similarity=0.206 Sum_probs=174.3
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
++.+|.+|+|.+.|. +|+|||+||+++++..|..+++.|.+ +||+|+++|+||||.|..+... ..
T Consensus 17 ~~~~g~~i~y~~~G~------gp~vlllHG~~~~~~~~~~~~~~L~~--------~g~~vi~~D~~G~G~S~~~~~~-~~ 81 (322)
T d1zd3a2 17 TVKPRVRLHFVELGS------GPAVCLCHGFPESWYSWRYQIPALAQ--------AGYRVLAMDMKGYGESSAPPEI-EE 81 (322)
T ss_dssp EEETTEEEEEEEECC------SSEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEEEECTTSTTSCCCSCG-GG
T ss_pred EECCCCEEEEEEEcC------CCeEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEecccccccccccccc-cc
Confidence 456789999999985 68999999999999999999999987 7999999999999999886532 46
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
++++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|+++++.................
T Consensus 82 ~~~~~~~~~i~~l~~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 152 (322)
T d1zd3a2 82 YCMEVLCKEMVTFLDKLGLS-QAVFIGHDWGGMLVWYMALFYPE--------RVRAVASLNTPFIPANPNMSPLESIKAN 152 (322)
T ss_dssp GSHHHHHHHHHHHHHHHTCS-CEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCCCCCCSSSCHHHHHHTC
T ss_pred ccccccchhhhhhhhccccc-ccccccccchHHHHHHHHHhCCc--------cccceEEEcccccccccccchhhhhhcc
Confidence 79999999999999999999 99999999999999999999999 9999999997644432222111110000
Q ss_pred H--HhhcCCCCCCcH-HHH-------HHHHHhhcc-----chhHHHHHhhcccCCCccc-ccccC---hhHH--------
Q 020518 183 Q--TLQSLPSSIPSR-KWL-------VNHMMELGF-----SKSLSEWIGTNLKKSGERE-TWAFN---LDGA-------- 235 (325)
Q Consensus 183 ~--~~~~~~~~~~~~-~~~-------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~-------- 235 (325)
. ............ ... ...+..... ................... ..... ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (322)
T d1zd3a2 153 PVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSG 232 (322)
T ss_dssp GGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHT
T ss_pred chhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcc
Confidence 0 000000000000 000 000000000 0000111111000000000 00000 0000
Q ss_pred -HHhhhcccC------CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 236 -VQMFNSYRE------MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 236 -~~~~~~~~~------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
......+.. .+.......+ ++|+++|+|++|..++++..+.+.+.+++ +++++++++||++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~ 302 (322)
T d1zd3a2 233 FRGPLNWYRNMERNWKWACKSLGRKI--LIPALMVTAEKDFVLVPQMSQHMEDWIPH--------LKRGHIEDCGHWTQM 302 (322)
T ss_dssp THHHHHTTSCHHHHHHHHHTTTTCCC--CSCEEEEEETTCSSSCGGGGTTGGGTCTT--------CEEEEETTCCSCHHH
T ss_pred cccccccccccccccccchhhhcccC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCC--------CEEEEECCCCCchHH
Confidence 000111110 1112223334 48999999999999999877766666555 899999999999999
Q ss_pred cChHHHHHHHHHHHhc
Q 020518 309 DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 309 e~p~~~~~~i~~fl~~ 324 (325)
|+|++|++.|.+||++
T Consensus 303 e~p~~v~~~i~~FL~~ 318 (322)
T d1zd3a2 303 DKPTEVNQILIKWLDS 318 (322)
T ss_dssp HSHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHhh
Confidence 9999999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=8.3e-38 Score=258.71 Aligned_cols=264 Identities=13% Similarity=0.045 Sum_probs=173.5
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|.+.|++ +..|+|||+||+++++..|..++..|.+ .||+|+++|+||||.|..+... ..++
T Consensus 31 ~~g~~~~y~~~G~~---~~~p~llllHG~~~~~~~~~~~~~~l~~--------~~~~vi~~Dl~G~G~S~~~~~~-~~~~ 98 (310)
T d1b6ga_ 31 YPGLRAHYLDEGNS---DAEDVFLCLHGEPTWSYLYRKMIPVFAE--------SGARVIAPDFFGFGKSDKPVDE-EDYT 98 (310)
T ss_dssp CTTCEEEEEEEECT---TCSCEEEECCCTTCCGGGGTTTHHHHHH--------TTCEEEEECCTTSTTSCEESCG-GGCC
T ss_pred CCCEEEEEEEecCC---CCCCEEEEECCCCCchHHHHHHHHHhhc--------cCceEEEeeecCcccccccccc-cccc
Confidence 47899999999875 3467899999999999999999999987 8999999999999999875431 5679
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH-------
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE------- 177 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~------- 177 (325)
++++++++.+++++++++ +++|+||||||.+++.+|.++|+ +|+++|++++.............
T Consensus 99 ~~~~~~~l~~~l~~l~~~-~~~lvGhS~Gg~ia~~~A~~~P~--------~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 169 (310)
T d1b6ga_ 99 FEFHRNFLLALIERLDLR-NITLVVQDWGGFLGLTLPMADPS--------RFKRLIIMNACLMTDPVTQPAFSAFVTQPA 169 (310)
T ss_dssp HHHHHHHHHHHHHHHTCC-SEEEEECTHHHHHHTTSGGGSGG--------GEEEEEEESCCCCCCTTTCTHHHHTTTSST
T ss_pred ccccccchhhhhhhcccc-ccccccceecccccccchhhhcc--------ccceEEEEcCccCCCcccchhHHHHhhcch
Confidence 999999999999999999 99999999999999999999999 99999999976533221110000
Q ss_pred -HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc-------CCcccc
Q 020518 178 -VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR-------EMSYWP 249 (325)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 249 (325)
............. ......+...............+.. ...... .......+........ ......
T Consensus 170 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T d1b6ga_ 170 DGFTAWKYDLVTPS-DLRLDQFMKRWAPTLTEAEASAYAA-PFPDTS----YQAGVRKFPKMVAQRDQACIDISTEAISF 243 (310)
T ss_dssp TTHHHHHHHHHSCS-SCCHHHHHHHHSTTCCHHHHHHHHT-TCSSGG----GCHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccch-hhhhhhhhhccCccccHHHHHHHHh-hcchhh----hhhcchhhhhhhhhhhhhhhhhhhhhhHH
Confidence 0000000000000 0011111111111111111111111 000000 0000000000000000 000111
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+ ++|+++|+|++|..++++..+.+.+.+++. .+++++++|||++++|+|+.+++.|.+||++
T Consensus 244 ~~~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-------~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 244 WQNDW--NGQTFMAIGMKDKLLGPDVMYPMKALINGC-------PEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHTC--CSEEEEEEETTCSSSSHHHHHHHHHHSTTC-------CCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred hhccc--CCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-------ccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 12233 389999999999999998888888777651 3788899999999999999999999999986
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=3.7e-37 Score=250.18 Aligned_cols=253 Identities=15% Similarity=0.195 Sum_probs=165.8
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
+..|+|.+.|. +|+|||+||++++...|..+++.|.+ +||+|+++|+||||.|+... ..++++
T Consensus 12 ~v~i~y~~~G~------G~~ivllHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~~~~ 74 (277)
T d1brta_ 12 SIDLYYEDHGT------GQPVVLIHGFPLSGHSWERQSAALLD--------AGYRVITYDRRGFGQSSQPT---TGYDYD 74 (277)
T ss_dssp EEEEEEEEECS------SSEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SCCSHH
T ss_pred cEEEEEEEEcc------CCeEEEECCCCCCHHHHHHHHHHHHh--------CCCEEEEEeCCCCCcccccc---cccchh
Confidence 45788999885 68899999999999999999998987 89999999999999998765 578999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhH-HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC------Cc-hhHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGG-KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE------NS-EGEV 178 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg-~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~------~~-~~~~ 178 (325)
++++|+.+++++++++ +++++|||||| .++..++.++|+ +|+++|++++.+...... .. ....
T Consensus 75 ~~~~dl~~~l~~l~~~-~~~lvGhS~G~~~~~~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (277)
T d1brta_ 75 TFAADLNTVLETLDLQ-DAVLVGFSTGTGEVARYVSSYGTA--------RIAKVAFLASLEPFLLKTDDNPDGAAPQEFF 145 (277)
T ss_dssp HHHHHHHHHHHHHTCC-SEEEEEEGGGHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCBTTBTTCSBCHHHH
T ss_pred hhhhhhhhhhhccCcc-cccccccccchhhhhHHHHHhhhc--------ccceEEEecCCCcccccchhhhhhhhhhhHH
Confidence 9999999999999999 99999999996 566667888899 999999999764332111 00 1111
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCccccc----ccChhHHHHhhhcccCCcccccccCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETW----AFNLDGAVQMFNSYREMSYWPLLEHP 254 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (325)
......... ............... .................+ .......... ......+....+.++
T Consensus 146 ~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i 216 (277)
T d1brta_ 146 DGIVAAVKA------DRYAFYTGFFNDFYN--LDENLGTRISEEAVRNSWNTAASGGFFAAAAA-PTTWYTDFRADIPRI 216 (277)
T ss_dssp HHHHHHHHH------CHHHHHHHHHHHHTT--HHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHG-GGGTTCCCTTTGGGC
T ss_pred HHHHHhhhc------cchhhhhhccccccc--cchhhhhhhhHHHhhhhhcccchhhhhhhhhh-hhhhhhhHHHHHHhc
Confidence 111111100 000000110000000 000000000000000000 0000000000 111122334445555
Q ss_pred CCCCcEEEEeeCCCCCCChHH-HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 255 PQGMEIAIVRAEKSDRWDPDV-IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+ +|+++|+|++|..++++. .+.+.+.+++ +++++++++||++++|+|++|++.|.+||++
T Consensus 217 ~--~P~lii~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 217 D--VPALILHGTGDRTLPIENTARVFHKALPS--------AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp C--SCEEEEEETTCSSSCGGGTHHHHHHHCTT--------SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred C--ccceeEeecCCCCcCHHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 4 899999999999998764 4556666555 8999999999999999999999999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=2.1e-37 Score=253.04 Aligned_cols=259 Identities=15% Similarity=0.178 Sum_probs=166.5
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+|+|..+|.+ .++|+|||+||+++++..|...+..+.+ +||+|+++|+||||.|+.+.. ..++
T Consensus 9 ~~g~~i~y~~~g~~---~~~~~iv~lHG~~g~~~~~~~~~~~~~~--------~~~~vi~~D~~G~G~S~~~~~--~~~~ 75 (290)
T d1mtza_ 9 VNGIYIYYKLCKAP---EEKAKLMTMHGGPGMSHDYLLSLRDMTK--------EGITVLFYDQFGCGRSEEPDQ--SKFT 75 (290)
T ss_dssp ETTEEEEEEEECCS---SCSEEEEEECCTTTCCSGGGGGGGGGGG--------GTEEEEEECCTTSTTSCCCCG--GGCS
T ss_pred ECCEEEEEEEcCCC---CCCCeEEEECCCCCchHHHHHHHHHHHH--------CCCEEEEEeCCCCcccccccc--cccc
Confidence 37889999999975 3478999999998888888877766665 799999999999999987654 6789
Q ss_pred HHHHHHHHHHHHHHh-CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 105 IANAANDLANLVKAK-GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
++++++|+.++++++ +.+ +++++||||||.+++.+|.++|+ +|+++|++++...... . .....
T Consensus 76 ~~~~~~~l~~ll~~l~~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~------~-~~~~~ 139 (290)
T d1mtza_ 76 IDYGVEEAEALRSKLFGNE-KVFLMGSSYGGALALAYAVKYQD--------HLKGLIVSGGLSSVPL------T-VKEMN 139 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTC-CEEEEEETHHHHHHHHHHHHHGG--------GEEEEEEESCCSBHHH------H-HHHHH
T ss_pred ccchhhhhhhhhccccccc-ccceecccccchhhhhhhhcChh--------hheeeeecccccCccc------c-hhhhh
Confidence 999999999999997 677 99999999999999999999999 9999999987642210 0 00000
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccc-----hhHHHHHhhcccCCCc--cccc-------ccChhHHHH------hhhccc
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFS-----KSLSEWIGTNLKKSGE--RETW-------AFNLDGAVQ------MFNSYR 243 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~------~~~~~~ 243 (325)
.+...... ................ .....+.......... .... ......... ......
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (290)
T d1mtza_ 140 RLIDELPA-KYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIK 218 (290)
T ss_dssp HHHHTSCH-HHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTT
T ss_pred hhhhhhhH-HHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhh
Confidence 00000000 0000000000000000 0000000000000000 0000 000000000 000011
Q ss_pred CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 244 EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+....+..++ +|+++|+|++|..+ ++..+.+.+.+++ +++++++++||++++|+|+++++.|.+||.
T Consensus 219 ~~~~~~~~~~i~--~P~l~i~G~~D~~~-~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~ 287 (290)
T d1mtza_ 219 DWDITDKISAIK--IPTLITVGEYDEVT-PNVARVIHEKIAG--------SELHVFRDCSHLTMWEDREGYNKLLSDFIL 287 (290)
T ss_dssp TCBCTTTGGGCC--SCEEEEEETTCSSC-HHHHHHHHHHSTT--------CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred cccHHHHhhccc--ceEEEEEeCCCCCC-HHHHHHHHHHCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHH
Confidence 122333344444 89999999999754 5666667666665 899999999999999999999999999997
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 288 ~ 288 (290)
T d1mtza_ 288 K 288 (290)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=1.4e-36 Score=248.77 Aligned_cols=258 Identities=17% Similarity=0.290 Sum_probs=165.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-CCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-LDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~ 104 (325)
+|.+|+|.+.|. +|+|||+||+++++..|..+++.|. ++|+|+++|+||||.|+.... ....++
T Consensus 16 ~~~~l~y~~~G~------gp~vv~lHG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 80 (293)
T d1ehya_ 16 PDVKIHYVREGA------GPTLLLLHGWPGFWWEWSKVIGPLA---------EHYDVIVPDLRGFGDSEKPDLNDLSKYS 80 (293)
T ss_dssp SSCEEEEEEEEC------SSEEEEECCSSCCGGGGHHHHHHHH---------TTSEEEEECCTTSTTSCCCCTTCGGGGC
T ss_pred CCEEEEEEEECC------CCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEecCCcccCCcccccccccccc
Confidence 578999999885 6899999999999999999999997 789999999999999986543 113568
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch-hHH-HHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE-GEV-EKVL 182 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~-~~~-~~~~ 182 (325)
++++++++.+++++++.+ +++++||||||.+|+.+|.++|+ ++.++|++++........... ... ....
T Consensus 81 ~~~~a~~~~~~~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 151 (293)
T d1ehya_ 81 LDKAADDQAALLDALGIE-KAYVVGHDFAAIVLHKFIRKYSD--------RVIKAAIFDPIQPDFGPVYFGLGHVHESWY 151 (293)
T ss_dssp HHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHHHHTGG--------GEEEEEEECCSCTTC-----------CCHH
T ss_pred chhhhhHHHhhhhhcCcc-ccccccccccccchhcccccCcc--------ccceeeeeeccCccccchhhhhhhhhhhhh
Confidence 999999999999999999 99999999999999999999999 999999999864332111000 000 0000
Q ss_pred HHhhcC------CCCCC-cHHHHHHHHHh-hccc-----h-hHHHHHhhcccCCCcccccccChhHHHHhhhc-c-cCCc
Q 020518 183 QTLQSL------PSSIP-SRKWLVNHMME-LGFS-----K-SLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-Y-REMS 246 (325)
Q Consensus 183 ~~~~~~------~~~~~-~~~~~~~~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 246 (325)
..+... ..... ........... .... . ........... ..........+.. . ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 223 (293)
T d1ehya_ 152 SQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMK--------PDNIHGGFNYYRANIRPDAA 223 (293)
T ss_dssp HHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTS--------TTHHHHHHHHHHHHSSSSCC
T ss_pred hhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhcccc--------chhhhhhhhhhhhccccchh
Confidence 000000 00000 00000011100 0000 0 00000000000 0000111111111 1 1111
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..........++|+++|+|++|..++.+.. +.+.+..++ +++++++++||++++|+|+++++.|.+||+
T Consensus 224 ~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 224 LWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSN--------YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSS--------EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred hhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCC--------CEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 112222223458999999999999887654 445555554 999999999999999999999999999985
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=8e-38 Score=253.14 Aligned_cols=255 Identities=16% Similarity=0.213 Sum_probs=171.3
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
..+|.+|+|.+.|. +|||||+||++++...|..+++.|.+ +||+|+++|+||||.|+.+. ..+
T Consensus 5 ~~dG~~l~y~~~G~------g~~vv~lHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~---~~~ 67 (271)
T d1va4a_ 5 AKDGTQIYFKDWGS------GKPVLFSHGWLLDADMWEYQMEYLSS--------RGYRTIAFDRRGFGRSDQPW---TGN 67 (271)
T ss_dssp CTTSCEEEEEEESS------SSEEEEECCTTCCGGGGHHHHHHHHT--------TTCEEEEECCTTSTTSCCCS---SCC
T ss_pred eECCeEEEEEEEcC------CCeEEEECCCCCCHHHHHHHHHHHHh--------CCCEEEEEeccccccccccc---ccc
Confidence 35789999999986 57899999999999999999999986 79999999999999998775 578
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHH-HHHHHccccccCCccCCcceEEEEecCCCCCCCCC------chh
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVAL-HFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN------SEG 176 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~-~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~------~~~ 176 (325)
+++++++++.+++++++.+ +++++|||+||.+++ .+|.++|+ ++.+++++++......... ...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~-~~~~vg~s~gG~~~~~~~a~~~p~--------~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 138 (271)
T d1va4a_ 68 DYDTFADDIAQLIEHLDLK-EVTLVGFSMGGGDVARYIARHGSA--------RVAGLVLLGAVTPLFGQKPDYPQGVPLD 138 (271)
T ss_dssp SHHHHHHHHHHHHHHHTCC-SEEEEEETTHHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCBTTBTTSBCHH
T ss_pred ccccccccceeeeeecCCC-cceeeccccccccccccccccccc--------eeeEEEeecccccccccchhhhhhhhhh
Confidence 9999999999999999999 999999999887655 55677888 9999999987654332111 111
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHH----HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHM----MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
........+.. ......... ................. ..................+...+....+.
T Consensus 139 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 208 (271)
T d1va4a_ 139 VFARFKTELLK------DRAQFISDFNAPFYGINKGQVVSQGVQTQT----LQIALLASLKATVDCVTAFAETDFRPDMA 208 (271)
T ss_dssp HHHHHHHHHHH------HHHHHHHHHHHHHHTGGGTCCCCHHHHHHH----HHHHHHSCHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHhhh------hhhhhhhhhcchhhcccchhhhhhhHHHHH----Hhhhhhhhhhhhhhcccccchhhhhhhhh
Confidence 11111111000 000000000 00000000000000000 00000111222223333333344445566
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHH-HHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRL-EGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++ +|+++|+|++|..++++...++ .+..++ +++++++++||++++|+|++|++.|.+||++
T Consensus 209 ~i~--~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 209 KID--VPTLVIHGDGDQIVPFETTGKVAAELIKG--------AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HCC--SCEEEEEETTCSSSCGGGTHHHHHHHSTT--------CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred hcc--cceeecccCCCCCCCHHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 665 8999999999999998766554 444454 8999999999999999999999999999975
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=8.6e-37 Score=247.50 Aligned_cols=255 Identities=19% Similarity=0.242 Sum_probs=170.4
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
++.||.+|+|++.|. +|||||+||++++...|..+++.|.+ +||+|+++|+||||.|+.+. ..
T Consensus 4 ~~~dG~~i~y~~~G~------g~pvvllHG~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~~~---~~ 66 (273)
T d1a8sa_ 4 TTRDGTQIYYKDWGS------GQPIVFSHGWPLNADSWESQMIFLAA--------QGYRVIAHDRRGHGRSSQPW---SG 66 (273)
T ss_dssp ECTTSCEEEEEEESC------SSEEEEECCTTCCGGGGHHHHHHHHH--------TTCEEEEECCTTSTTSCCCS---SC
T ss_pred EeeCCcEEEEEEECC------CCeEEEECCCCCCHHHHHHHHHHHHh--------CCCEEEEEechhcCcccccc---cc
Confidence 446899999999885 67899999999999999999999976 89999999999999998876 57
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHH-HHHHccccccCCccCCcceEEEEecCCCCCCCCC--chhHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALH-FAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN--SEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~-~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~ 179 (325)
++++++++|+.+++++++.+ +.+++|||+||.+++. ++.++|+ +|++++++++.+....... ......
T Consensus 67 ~~~~~~~~~~~~~l~~l~~~-~~~lvg~s~gG~~~~~~~a~~~p~--------~v~~~~l~~~~~~~~~~~~~~~~~~~~ 137 (273)
T d1a8sa_ 67 NDMDTYADDLAQLIEHLDLR-DAVLFGFSTGGGEVARYIGRHGTA--------RVAKAGLISAVPPLMLKTEANPGGLPM 137 (273)
T ss_dssp CSHHHHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHHCST--------TEEEEEEESCCCSCCBCCSSCTTSBCH
T ss_pred ccccchHHHHHHHHHhcCcc-ceeeeeeccCCccchhhhhhhhhh--------ccceeEEEecccccccccccccccchh
Confidence 89999999999999999999 9999999998865555 4556688 9999999997654332111 000001
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhcc----------chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGF----------SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
.....+.... ..........+..... .....++.... ...............+...+...
T Consensus 138 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
T d1a8sa_ 138 EVFDGIRQAS--LADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQ--------GMAAGHKNAYDCIKAFSETDFTE 207 (273)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHH--------HHHSCHHHHHHHHHHHHHCCCHH
T ss_pred hhhhhHHHHH--HHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHh--------hcccchhhhhhhHHHhhhhhhhH
Confidence 0000000000 0000000001100000 00000000000 00011122222223333444555
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHH-HhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG-LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.+.+++ +|+++|+|++|..++++..+.+.+ +.++ ++++++|++||++++|+|+++++.|.+||+
T Consensus 208 ~~~~i~--~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 208 DLKKID--VPTLVVHGDADQVVPIEASGIASAALVKG--------STLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHTCC--SCEEEEEETTCSSSCSTTTHHHHHHHSTT--------CEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHhhc--cceEEEecCCCCCCCHHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 666665 899999999999998876555543 3344 899999999999999999999999999996
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-37 Score=248.70 Aligned_cols=250 Identities=17% Similarity=0.191 Sum_probs=162.8
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.|+|+..|.+ +++|||+||+++++..|..+++.|. ++|+|+++|+||||.|+.. ..+++.++
T Consensus 1 ~i~y~~~G~g-----~~~lvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~D~~G~G~S~~~----~~~~~~d~ 62 (256)
T d1m33a_ 1 NIWWQTKGQG-----NVHLVLLHGWGLNAEVWRCIDEELS---------SHFTLHLVDLPGFGRSRGF----GALSLADM 62 (256)
T ss_dssp CCCEEEECCC-----SSEEEEECCTTCCGGGGGGTHHHHH---------TTSEEEEECCTTSTTCCSC----CCCCHHHH
T ss_pred CeEEEEECCC-----CCeEEEECCCCCCHHHHHHHHHHHh---------CCCEEEEEeCCCCCCcccc----cccccccc
Confidence 3788888863 6799999999999999999999997 7899999999999999865 34565544
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
+ +.+..+..+ +++++||||||.+++.+|.++|+ ++++++++++.+..................+...
T Consensus 63 ~----~~~~~~~~~-~~~l~GhS~Gg~ia~~~a~~~p~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (256)
T d1m33a_ 63 A----EAVLQQAPD-KAIWLGWSLGGLVASQIALTHPE--------RVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQ 129 (256)
T ss_dssp H----HHHHTTSCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHH
T ss_pred c----ccccccccc-ceeeeecccchHHHHHHHHhCCc--------ccceeeeeecccccccchhhhhhHHHHHHHHHhh
Confidence 4 445556677 99999999999999999999999 9999999987654432222111111111100000
Q ss_pred CCCCCcHHHHHHHHHhhccch-hH---HHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEe
Q 020518 189 PSSIPSRKWLVNHMMELGFSK-SL---SEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
... .........+....... .. ........... ..............+...+....++.++ +|+++|+
T Consensus 130 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~ 201 (256)
T d1m33a_ 130 LSD-DQQRTVERFLALQTMGTETARQDARALKKTVLAL-----PMPEVDVLNGGLEILKTVDLRQPLQNVS--MPFLRLY 201 (256)
T ss_dssp HHH-HHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTS-----CCCCHHHHHHHHHHHHHCCCTTGGGGCC--SCEEEEE
T ss_pred hhh-hhHHHHHHHhhhhhccccchhhHHHHHHHhhhhc-----chhhHHHHHhhhhhhcccchHHHHHhcc--CCccccc
Confidence 000 00000001111111000 00 01111100000 0011222222333333445556666665 8999999
Q ss_pred eCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 265 AEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 265 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||+++
T Consensus 202 G~~D~~~p~~~~~~l~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 202 GYLDGLVPRKVVPMLDKLWPH--------SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp ETTCSSSCGGGCC-CTTTCTT--------CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred cccCCCCCHHHHHHHHHHCCC--------CEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 999999998877766665554 89999999999999999999999999999875
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=5.3e-37 Score=249.62 Aligned_cols=252 Identities=16% Similarity=0.166 Sum_probs=162.9
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
+.+|+|.+.|. +|+|||+||+++++..|..++..|.+ ++|+|+++|+||||.|+.+. ..++++
T Consensus 12 ~v~i~y~~~G~------g~~illlHG~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~~~---~~~~~~ 74 (279)
T d1hkha_ 12 PIELYYEDQGS------GQPVVLIHGYPLDGHSWERQTRELLA--------QGYRVITYDRRGFGGSSKVN---TGYDYD 74 (279)
T ss_dssp EEEEEEEEESS------SEEEEEECCTTCCGGGGHHHHHHHHH--------TTEEEEEECCTTSTTSCCCS---SCCSHH
T ss_pred eEEEEEEEEcc------CCeEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEEechhhCCccccc---cccchh
Confidence 44899999885 68999999999999999999988866 89999999999999998765 578999
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhH-HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC-Cc----hhHH-H
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGG-KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE-NS----EGEV-E 179 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg-~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~-~~----~~~~-~ 179 (325)
++++|+.+++++++.+ +++|+|||||| .++..+|.++|+ +|.+++++++........ .. .... .
T Consensus 75 ~~~~di~~~i~~l~~~-~~~lvGhS~Gg~~~a~~~a~~~p~--------~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 145 (279)
T d1hkha_ 75 TFAADLHTVLETLDLR-DVVLVGFSMGTGELARYVARYGHE--------RVAKLAFLASLEPFLVQRDDNPEGVPQEVFD 145 (279)
T ss_dssp HHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHHCST--------TEEEEEEESCCCSBCBCBTTBTTSBCHHHHH
T ss_pred hhhhhhhhhhhhcCcC-ccccccccccccchhhhhcccccc--------ccceeEEeeccCCccccchhhhhhhhHHHHH
Confidence 9999999999999999 99999999996 666777888899 999999998764332111 10 1111 1
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHH------hhccchhH-HHHHhhcccCCCcccccccChhHHHHhhhcccC-Ccccccc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMM------ELGFSKSL-SEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE-MSYWPLL 251 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (325)
............ .......... .....+.. .......... . .............. ......+
T Consensus 146 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~ 215 (279)
T d1hkha_ 146 GIEAAAKGDRFA--WFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGS-A-------PVAAYAVVPAWIEDFRSDVEAV 215 (279)
T ss_dssp HHHHHHHHCHHH--HHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTS-C-------TTHHHHTHHHHTCBCHHHHHHH
T ss_pred HHHHhhhhhhhh--hhhhhhhhhcccchhhhhhhhhhhhhhhhhhhccc-c-------hhhhhhhhhhhhcccccchhhh
Confidence 111110000000 0000000000 00000000 0000000000 0 00000000000000 0011122
Q ss_pred cCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+ ++|+++|+|++|..++.+ ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 216 ~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~--------~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 216 RAA--GKPTLILHGTKDNILPIDATARRFHQAVPE--------ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHH--CCCEEEEEETTCSSSCTTTTHHHHHHHCTT--------SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred ccc--CCceEEEEcCCCCccCHHHHHHHHHHhCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 223 389999999999998864 45666666665 8999999999999999999999999999974
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=3.3e-36 Score=241.11 Aligned_cols=239 Identities=11% Similarity=0.054 Sum_probs=161.9
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+++|||+||+++++..|..+++.|++ +||+|+++|+||||.|+.+.. ..+++++++.++..+++......
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~--------~g~~vi~~Dl~G~G~S~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 71 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEA--------AGHKVTALDLAASGTDLRKIE--ELRTLYDYTLPLMELMESLSADE 71 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHH--------TTCEEEECCCTTSTTCCCCGG--GCCSHHHHHHHHHHHHHTSCSSS
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCCC--CCcchHHHHHHHhhhhhcccccc
Confidence 67999999999999999999999997 899999999999999988765 67899999999999999987765
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCC----------
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP---------- 193 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 193 (325)
+++++||||||.+++.++.++|+ +++++|++++.......... ..................
T Consensus 72 ~~~lvghS~Gg~va~~~a~~~p~--------~~~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (258)
T d1xkla_ 72 KVILVGHSLGGMNLGLAMEKYPQ--------KIYAAVFLAAFMPDSVHNSS-FVLEQYNERTPAENWLDTQFLPYGSPEE 142 (258)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESCCCCCSSSCTT-HHHHHHHHTSCTTTTTTCEEEECSCTTS
T ss_pred cccccccchhHHHHHHHhhhhcc--------ccceEEEecccCCCcccchH-HHHHHHhhhhhhhhhhhhhhhhhhhhhh
Confidence 89999999999999999999999 99999999976443322211 111111111111000000
Q ss_pred ------cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCC
Q 020518 194 ------SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267 (325)
Q Consensus 194 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 267 (325)
............................. ...... ....+.......+ .+|+++|+|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~~~~~~~~~--~~P~l~i~g~~ 207 (258)
T d1xkla_ 143 PLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPS----------SLFMED---LSKAKYFTDERFG--SVKRVYIVCTE 207 (258)
T ss_dssp CCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCB----------CCCHHH---HHHCCCCCTTTGG--GSCEEEEEETT
T ss_pred hcccccccHHHHHHHhhhcccHHHHHHhhhhhhhh----------hhhhhh---hhhhhhccccccc--ccceeEeeecC
Confidence 00000000000000000000000000000 000000 0011111222222 38999999999
Q ss_pred CCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 268 SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 268 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|..++++..+.+.+.+++ +++++++++||++++|+|+++++.|.+|+++
T Consensus 208 D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k 256 (258)
T d1xkla_ 208 DKGIPEEFQRWQIDNIGV--------TEAIEIKGADHMAMLCEPQKLCASLLEIAHK 256 (258)
T ss_dssp CTTTTHHHHHHHHHHHCC--------SEEEEETTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHHh
Confidence 999999988888887766 8999999999999999999999999999875
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=1.1e-36 Score=244.11 Aligned_cols=235 Identities=11% Similarity=0.084 Sum_probs=156.9
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
.|||||+++++..|..+++.|.+ +||+|+++|+||||.|+.+.. ..++++++++++.++++++....+++
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~--------~g~~Via~Dl~G~G~S~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~ 74 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEA--------LGHKVTALDLAASGVDPRQIE--EIGSFDEYSEPLLTFLEALPPGEKVI 74 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHH--------TTCEEEEECCTTSTTCSCCGG--GCCSHHHHTHHHHHHHHHSCTTCCEE
T ss_pred EEEeCCCCCCHHHHHHHHHHHHh--------CCCEEEEEcCCCCCCCCCCCC--CCCCHHHHHHHhhhhhhhhcccccee
Confidence 58999999999999999999987 799999999999999988754 67899999999999999876444999
Q ss_pred EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCC--------------
Q 020518 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSI-------------- 192 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 192 (325)
|+||||||.+++.++.++|+ +|+++|++++........... ................
T Consensus 75 lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T d3c70a1 75 LVGESCGGLNIAIAADKYCE--------KIAAAVFHNSVLPDTEHCPSY-VVDKLMEVFPDWKDTTYFTYTKDGKEITGL 145 (256)
T ss_dssp EEEETTHHHHHHHHHHHHGG--------GEEEEEEESCCCCCSSSCTTH-HHHHHHHHSCCCTTCEEEEEEETTEEEEEE
T ss_pred ecccchHHHHHHHHhhcCch--------hhhhhheeccccCCcccchhh-HhhhhhhhhhhhhhhHHHhhhccccccchh
Confidence 99999999999999999999 999999999764333222111 1111111111100000
Q ss_pred -CcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 193 -PSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
.... ............. ........... ........ ........... ..+|+++|+|++|..+
T Consensus 146 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~~--~~~P~l~i~G~~D~~~ 209 (256)
T d3c70a1 146 KLGFT-LLRENLYTLCGPE-EYELAKMLTRK---------GSLFQNIL---AKRPFFTKEGY--GSIKKIYVWTDQDEIF 209 (256)
T ss_dssp ECCHH-HHHHHTSTTSCHH-HHHHHHHHCCC---------BCCCHHHH---TTSCCCCTTTG--GGSCEEEEECTTCSSS
T ss_pred hhhhh-hhhhhhhhhcchh-hHHHhhhhhhh---------hhHHHhhh---hhcchhhhhhc--cccceeEEeecCCCCC
Confidence 0000 0000000000000 00000000000 00000000 01111111111 2489999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++..+.+.+..++ +++++++++||++++|+|+++++.|.+|+++
T Consensus 210 ~~~~~~~~~~~~p~--------~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~ 254 (256)
T d3c70a1 210 LPEFQLWQIENYKP--------DKVYKVEGGDHKLQLTKTKEIAEILQEVADT 254 (256)
T ss_dssp CHHHHHHHHHHSCC--------SEEEECCSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCC--------CEEEEECCCCCchHHhCHHHHHHHHHHHHHh
Confidence 99888888777765 8999999999999999999999999999875
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-36 Score=233.38 Aligned_cols=194 Identities=21% Similarity=0.217 Sum_probs=154.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|.+++|++.++.. .+.+++|||+||++++...|.. +++.|++ .||+|+++|+||||.|..+... ..
T Consensus 13 v~G~~i~y~~~~~~~-~~~~~~vvllHG~~~~~~~w~~~~~~~~la~--------~gy~via~D~~G~G~S~~~~~~-~~ 82 (208)
T d1imja_ 13 VQGQALFFREALPGS-GQARFSVLLLHGIRFSSETWQNLGTLHRLAQ--------AGYRAVAIDLPGLGHSKEAAAP-AP 82 (208)
T ss_dssp ETTEEECEEEEECSS-SCCSCEEEECCCTTCCHHHHHHHTHHHHHHH--------TTCEEEEECCTTSGGGTTSCCS-SC
T ss_pred ECCEEEEEEEecCCC-CCCCCeEEEECCCCCChhHHhhhHHHHHHHH--------cCCeEEEeecccccCCCCCCcc-cc
Confidence 378999999988742 3567899999999999999987 4678887 8999999999999999876531 34
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
++....++++.++++.++.+ +++|+||||||.+++.+|.++|+ +++++|++++......
T Consensus 83 ~~~~~~~~~l~~~~~~l~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~lV~~~p~~~~~~------------ 141 (208)
T d1imja_ 83 IGELAPGSFLAAVVDALELG-PPVVISPSLSGMYSLPFLTAPGS--------QLPGFVPVAPICTDKI------------ 141 (208)
T ss_dssp TTSCCCTHHHHHHHHHHTCC-SCEEEEEGGGHHHHHHHHTSTTC--------CCSEEEEESCSCGGGS------------
T ss_pred cchhhhhhhhhhcccccccc-cccccccCcHHHHHHHHHHHhhh--------hcceeeecCccccccc------------
Confidence 56667778899999999999 99999999999999999999999 9999999986421000
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
.. ..+..++ +|+|+
T Consensus 142 ------------------------------------------------~~----------------~~~~~i~--~P~Li 155 (208)
T d1imja_ 142 ------------------------------------------------NA----------------ANYASVK--TPALI 155 (208)
T ss_dssp ------------------------------------------------CH----------------HHHHTCC--SCEEE
T ss_pred ------------------------------------------------cc----------------ccccccc--ccccc
Confidence 00 0112233 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
|+|++|.+++... +.+...+ ++++.+++++||.+++|+|++|++.|.+||+++
T Consensus 156 i~G~~D~~~~~~~-----~~~~~~~-----~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 156 VYGDQDPMGQTSF-----EHLKQLP-----NHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp EEETTCHHHHHHH-----HHHTTSS-----SEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred ccCCcCcCCcHHH-----HHHHhCC-----CCeEEEECCCCCchhhhCHHHHHHHHHHHHhcC
Confidence 9999998765432 2223333 299999999999999999999999999999875
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=1.4e-34 Score=239.63 Aligned_cols=120 Identities=26% Similarity=0.284 Sum_probs=106.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.||.+|+|+++|++ +++||||+||+++++..|......+. ++|+|+++|+||||.|+++... ..++
T Consensus 19 ~dg~~i~y~~~G~~----~g~pvvllHG~~g~~~~~~~~~~~l~---------~~~~Vi~~D~rG~G~S~~~~~~-~~~~ 84 (313)
T d1azwa_ 19 DDRHTLYFEQCGNP----HGKPVVMLHGGPGGGCNDKMRRFHDP---------AKYRIVLFDQRGSGRSTPHADL-VDNT 84 (313)
T ss_dssp SSSCEEEEEEEECT----TSEEEEEECSTTTTCCCGGGGGGSCT---------TTEEEEEECCTTSTTSBSTTCC-TTCC
T ss_pred CCCcEEEEEEecCC----CCCEEEEECCCCCCccchHHHhHHhh---------cCCEEEEEeccccCCCCccccc-cchh
Confidence 46889999999963 58899999999999989887654444 7999999999999999876432 5789
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
++++++|+.+++++++++ +++|+||||||.+++.+|.++|+ +|++++++++.+.
T Consensus 85 ~~~~~~dl~~~~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lv~~~~~~~ 138 (313)
T d1azwa_ 85 TWDLVADIERLRTHLGVD-RWQVFGGSWGSTLALAYAQTHPQ--------QVTELVLRGIFLL 138 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHhhccc-cceeEEecCCcHHHHHHHHHhhh--------ceeeeeEeccccc
Confidence 999999999999999999 99999999999999999999999 9999999997653
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=5.8e-34 Score=228.66 Aligned_cols=252 Identities=19% Similarity=0.253 Sum_probs=145.9
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHH
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 107 (325)
.+|+|...+. ++|+|||+||+++++..|..+++.|++ .||+|+++|+||||.|..... .......
T Consensus 5 ~~lh~~~~~~-----~~P~ivllHG~~~~~~~~~~~~~~L~~--------~g~~vi~~Dl~G~G~s~~~~~--~~~~~~~ 69 (264)
T d1r3da_ 5 NQLHFAKPTA-----RTPLVVLVHGLLGSGADWQPVLSHLAR--------TQCAALTLDLPGHGTNPERHC--DNFAEAV 69 (264)
T ss_dssp EEEESSCCBT-----TBCEEEEECCTTCCGGGGHHHHHHHTT--------SSCEEEEECCTTCSSCC---------CHHH
T ss_pred CeEEEcCCCC-----CCCeEEEeCCCCCCHHHHHHHHHHHHh--------CCCEEEEEecccccccccccc--cccchhh
Confidence 4666654433 478999999999999999999999986 799999999999999987754 3344444
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH--HHh
Q 020518 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL--QTL 185 (325)
Q Consensus 108 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~--~~~ 185 (325)
.+.+........+.+ +++++||||||.+++.++.++|+ .+.+++++...+................ ..+
T Consensus 70 ~~~~~~~~~~~~~~~-~~~lvGhS~Gg~ia~~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T d1r3da_ 70 EMIEQTVQAHVTSEV-PVILVGYSLGGRLIMHGLAQGAF--------SRLNLRGAIIEGGHFGLQENEEKAARWQHDQQW 140 (264)
T ss_dssp HHHHHHHHTTCCTTS-EEEEEEETHHHHHHHHHHHHTTT--------TTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHH
T ss_pred hhhhhcccccccccC-ceeeeeecchHHHHHHHHHhCch--------hccccccccccCCCccccchhhhhhhhhhhhhh
Confidence 444444444455666 89999999999999999999999 8999888776543332222111111000 000
Q ss_pred hcCCCCCCcHHHHHHHHHhh----ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 186 QSLPSSIPSRKWLVNHMMEL----GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
........ ........... .................. ......................+..++ +|++
T Consensus 141 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~--~p~l 212 (264)
T d1r3da_ 141 AQRFSQQP-IEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANL-----GSSVAHMLLATSLAKQPYLLPALQALK--LPIH 212 (264)
T ss_dssp HHHHHHSC-HHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTSC-----HHHHHHHHHHTCGGGCCCCHHHHHTCS--SCEE
T ss_pred hhhhhhhh-hhhhhhhhhhhhhhcccchHHHHHHHHHHhhhh-----hhhhHHhhhhccccccccchhhhhccC--cceE
Confidence 00000000 00000000000 000000000000000000 000011111111122223344455555 8999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+|+|++|..+ ..+.+. ++ ++++++++|||++++|+|++|++.|.+||++|
T Consensus 213 ~i~G~~D~~~-----~~~~~~-~~--------~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 213 YVCGEQDSKF-----QQLAES-SG--------LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp EEEETTCHHH-----HHHHHH-HC--------SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEeCCcHHH-----HHHHhc-CC--------CeEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 9999998432 222222 23 89999999999999999999999999999874
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=3.3e-32 Score=222.51 Aligned_cols=259 Identities=15% Similarity=0.153 Sum_probs=155.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~ 104 (325)
+|.+++|.+.|. +|+|||+||+++++..|..+++.|+ ++|+|+++|+||||.|+.+... .....
T Consensus 16 ~g~~i~y~~~G~------g~~vvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 80 (298)
T d1mj5a_ 16 KGRRMAYIDEGT------GDPILFQHGNPTSSYLWRNIMPHCA---------GLGRLIACDLIGMGDSDKLDPSGPERYA 80 (298)
T ss_dssp TTEEEEEEEESC------SSEEEEECCTTCCGGGGTTTGGGGT---------TSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred CCEEEEEEEEcC------CCcEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEEeCCCCCCCCCCccccccccc
Confidence 678999999885 6899999999999999999998887 6899999999999999876531 13445
Q ss_pred HHHHHHHHHHHHHHh-CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 105 IANAANDLANLVKAK-GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
..+..+++..++.+. +.+ +++++||||||.+++.++.++|+ +|.+++++++.+.................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~l~~~~~~~~~~~~~~~~~~~~~~~~ 151 (298)
T d1mj5a_ 81 YAEHRDYLDALWEALDLGD-RVVLVVHDWGSALGFDWARRHRE--------RVQGIAYMEAIAMPIEWADFPEQDRDLFQ 151 (298)
T ss_dssp HHHHHHHHHHHHHHTTCTT-CEEEEEEHHHHHHHHHHHHHTGG--------GEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred cchhhhhhccccccccccc-cCeEEEecccchhHHHHHHHHHh--------hhheeeccccccccccchhhhhhhhhhhh
Confidence 667777777766555 456 99999999999999999999999 99999999987544322211111111111
Q ss_pred HhhcCC-----CCCCcH-HHHHHHHHhhccchhHHHHHhhcccCCCcccc----------cccChhHHHHhhhcccCCcc
Q 020518 184 TLQSLP-----SSIPSR-KWLVNHMMELGFSKSLSEWIGTNLKKSGERET----------WAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 184 ~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 247 (325)
...... ...... ................................ ........... ..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 226 (298)
T d1mj5a_ 152 AFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAI-----ARDY 226 (298)
T ss_dssp HHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHH-----HHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhh-----hhhh
Confidence 110000 000000 00000000000011100000000000000000 00000000000 0011
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
...+..++ +|++++.|++|...+ ...+.+.+.+++ +++++++ +||++++|+|++|++.|.+||+++
T Consensus 227 ~~~~~~~~--~P~l~i~g~~d~~~~-~~~~~~~~~~p~--------~~~~~~~-~GH~~~~e~P~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 227 AGWLSESP--IPKLFINAEPGALTT-GRMRDFCRTWPN--------QTEITVA-GAHFIQEDSPDEIGAAIAAFVRRL 292 (298)
T ss_dssp HHHHTTCC--SCEEEEEEEECSSSS-HHHHHHHTTCSS--------EEEEEEE-ESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhcc--eeEEEEecCCCCcCh-HHHHHHHHHCCC--------CEEEEeC-CCCchHHhCHHHHHHHHHHHHhhh
Confidence 12233333 899999999887654 444445444443 7777665 699999999999999999999863
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=2.3e-32 Score=224.94 Aligned_cols=120 Identities=20% Similarity=0.219 Sum_probs=108.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.||.+|+|++.|++ ++|||||+||+++++..|..+...|+ ++|+||++|+||||.|+.+... ..++
T Consensus 19 ~dG~~i~y~~~G~~----~g~pvvllHG~~~~~~~w~~~~~~l~---------~~~~vi~~D~rG~G~S~~~~~~-~~~~ 84 (313)
T d1wm1a_ 19 GDGHRIYWELSGNP----NGKPAVFIHGGPGGGISPHHRQLFDP---------ERYKVLLFDQRGCGRSRPHASL-DNNT 84 (313)
T ss_dssp SSSCEEEEEEEECT----TSEEEEEECCTTTCCCCGGGGGGSCT---------TTEEEEEECCTTSTTCBSTTCC-TTCS
T ss_pred CCCcEEEEEEecCC----CCCeEEEECCCCCcccchHHHHHHhh---------cCCEEEEEeCCCcccccccccc-cccc
Confidence 46999999999973 57899999999999999999877665 7999999999999999876542 5788
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
...+++|+..+++++++. +++++|||+||.+++.+|..+|+ +|.+++++++...
T Consensus 85 ~~~~~~d~~~~~~~~~~~-~~~~vg~s~g~~~~~~~a~~~~~--------~v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 85 TWHLVADIERLREMAGVE-QWLVFGGSWGSTLALAYAQTHPE--------RVSEMVLRGIFTL 138 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHCGG--------GEEEEEEESCCCC
T ss_pred hhhHHHHHHhhhhccCCC-cceeEeeecCCchhhHHHHHHhh--------hheeeeecccccc
Confidence 999999999999999999 99999999999999999999999 9999999987643
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=1.3e-31 Score=228.34 Aligned_cols=129 Identities=13% Similarity=0.062 Sum_probs=109.7
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|||...++.. ++++||||+|||++++..|..+++.|++... ..+..|+||++|+||||.|++|... ..++.
T Consensus 90 ~G~~iHf~h~~~~~--~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~--~~~~~f~VIaPDLpG~G~S~~P~~~-~~y~~ 164 (394)
T d1qo7a_ 90 EGLTIHFAALFSER--EDAVPIALLHGWPGSFVEFYPILQLFREEYT--PETLPFHLVVPSLPGYTFSSGPPLD-KDFGL 164 (394)
T ss_dssp TTEEEEEEEECCSC--TTCEEEEEECCSSCCGGGGHHHHHHHHHHCC--TTTCCEEEEEECCTTSTTSCCCCSS-SCCCH
T ss_pred CCEEEEEEEEeccC--CCCCEEEEeccccccHHHHHHHHHhhccccC--CcccceeeecccccccCCCCCCCCC-CccCH
Confidence 68999998776532 4689999999999999999999999997210 0001299999999999999987542 57999
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
.++++++..+++.++.+ +++++|||+||.++..++..+|+ .+.+++++......
T Consensus 165 ~~~a~~~~~l~~~lg~~-~~~~vg~~~Gg~v~~~~a~~~p~--------~~~~~~l~~~~~~~ 218 (394)
T d1qo7a_ 165 MDNARVVDQLMKDLGFG-SGYIIQGGDIGSFVGRLLGVGFD--------ACKAVHLNLCAMRA 218 (394)
T ss_dssp HHHHHHHHHHHHHTTCT-TCEEEEECTHHHHHHHHHHHHCT--------TEEEEEESCCCCCS
T ss_pred HHHHHHHHHHHhhccCc-ceEEEEecCchhHHHHHHHHhhc--------cccceeEeeecccc
Confidence 99999999999999999 99999999999999999999999 99999988765433
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=4.3e-31 Score=208.98 Aligned_cols=226 Identities=17% Similarity=0.181 Sum_probs=145.0
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHH---HHHHHHh
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL---ANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l---~~~l~~~ 119 (325)
++++|||+||++++...|..+++.|++ +||+|+++|+||||.|..+. ......+..+++ ...++..
T Consensus 10 ~~~~vvliHG~~~~~~~~~~l~~~L~~--------~G~~v~~~D~~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~ 78 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSADVRMLGRFLES--------KGYTCHAPIYKGHGVPPEEL---VHTGPDDWWQDVMNGYEFLKNK 78 (242)
T ss_dssp SSCEEEEECCTTCCTHHHHHHHHHHHH--------TTCEEEECCCTTSSSCHHHH---TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEEeCCCCccccccc---cccchhHHHHHHHHHHhhhhhc
Confidence 367899999999999999999999997 89999999999999997654 345555555544 4445666
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHH
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (325)
+.+ +++++||||||.+++.++.++|. ..+++++++...... .............
T Consensus 79 ~~~-~~~l~G~S~Gg~~~~~~~~~~~~----------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------ 132 (242)
T d1tqha_ 79 GYE-KIAVAGLSLGGVFSLKLGYTVPI----------EGIVTMCAPMYIKSE---ETMYEGVLEYARE------------ 132 (242)
T ss_dssp TCC-CEEEEEETHHHHHHHHHHTTSCC----------SCEEEESCCSSCCCH---HHHHHHHHHHHHH------------
T ss_pred ccC-ceEEEEcchHHHHhhhhcccCcc----------cccccccccccccch---hHHHHHHHHHHHH------------
Confidence 788 99999999999999999999886 345566654332211 1111111111100
Q ss_pred HHHHhhc-cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 200 NHMMELG-FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 200 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
...... ................... ......... .....+..+. +|+++++|++|..++++..+.
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~--~p~lii~g~~D~~~~~~~~~~ 198 (242)
T d1tqha_ 133 -YKKREGKSEEQIEQEMEKFKQTPMKT------LKALQELIA-----DVRDHLDLIY--APTFVVQARHDEMINPDSANI 198 (242)
T ss_dssp -HHHHHTCCHHHHHHHHHHHTTSCCTT------HHHHHHHHH-----HHHHTGGGCC--SCEEEEEETTCSSSCTTHHHH
T ss_pred -HhhhccchhhhHHHHHhhhhhhccch------hhccccccc-----ccccccceec--cccceeecccCCccCHHHHHH
Confidence 000000 0000011111000000000 000000000 0112223333 799999999999999998888
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhcC
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIASV 325 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~ 325 (325)
+.+.+.. +++++++++++||++++| .|+++++.|.+||+++
T Consensus 199 ~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 199 IYNEIES------PVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp HHHHCCC------SSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHHHcCC------CCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 8777643 238999999999999987 5999999999999875
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.2e-31 Score=212.66 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=94.9
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
++||||+||+++++..|..+++.|.+.. .+|+|+++|+||||.|..+ ..++++++++++.+++++++ +
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~------~~~~v~~~d~~G~g~S~~~----~~~~~~~~~~~l~~~l~~l~-~- 69 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETH------PGTVVTVLDLFDGRESLRP----LWEQVQGFREAVVPIMAKAP-Q- 69 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHS------TTCCEEECCSSCSGGGGSC----HHHHHHHHHHHHHHHHHHCT-T-
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhC------CCeEEEEeCCCCCCCCCCc----cccCHHHHHHHHHHHHhccC-C-
Confidence 6789999999999999999999999754 6899999999999999876 46889999999999999998 7
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++|+||||||.+|+.+|.++|+ .+|+++|+++++.
T Consensus 70 ~~~lvGhS~GG~ia~~~a~~~p~-------~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 70 GVHLICYSQGGLVCRALLSVMDD-------HNVDSFISLSSPQ 105 (268)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTT-------CCEEEEEEESCCT
T ss_pred eEEEEccccHHHHHHHHHHHCCc-------cccceEEEECCCC
Confidence 99999999999999999999997 2599999999754
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.97 E-value=1.3e-29 Score=214.52 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=97.1
Q ss_pred ccccccceEEEEc--cc--CCCCCCCceEEEecCCCCCCCChH------HHHHHHHhhhhccCCCCceEEEEeCCCCCCC
Q 020518 23 TTRSLQTLAYEEV--RS--SSDRPYTSTAFVLHGLLGSGRNWR------SFSRNLASTLSQTSASSEWRMVLVDLRNHGR 92 (325)
Q Consensus 23 ~~~~~~~l~y~~~--~~--~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~ 92 (325)
++.||..|....+ +. ......+|+|||+||+++++..|. .++..|.+ +||+|+++|+||||.
T Consensus 33 ~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~--------~Gy~V~~~D~rG~G~ 104 (377)
T d1k8qa_ 33 VTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILAD--------AGYDVWLGNSRGNTW 104 (377)
T ss_dssp ECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHH--------TTCEEEECCCTTSTT
T ss_pred EcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHH--------CCCEEEEEcCCCCCC
Confidence 3467876655432 22 123356789999999999999984 47788887 899999999999999
Q ss_pred CCCCCCCC------CCCCHH-----HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEE
Q 020518 93 SAEIEGLD------PPHDIA-----NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161 (325)
Q Consensus 93 S~~~~~~~------~~~~~~-----~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvl 161 (325)
|..+.... ..++++ ++++++..+++.++.+ +++++||||||++++.+|.++|+ .++++++
T Consensus 105 S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~-~v~lvGhS~GG~ia~~~a~~~p~--------~~~~l~~ 175 (377)
T d1k8qa_ 105 ARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQD-KLHYVGHSQGTTIGFIAFSTNPK--------LAKRIKT 175 (377)
T ss_dssp SCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCS-CEEEEEETHHHHHHHHHHHHCHH--------HHTTEEE
T ss_pred CCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCC-CEEEEEecchHHHHHHHHHhhhh--------hhhhcee
Confidence 98654211 223444 4556677778888988 99999999999999999999999 8888888
Q ss_pred EecC
Q 020518 162 LDSV 165 (325)
Q Consensus 162 i~~~ 165 (325)
+...
T Consensus 176 ~~~~ 179 (377)
T d1k8qa_ 176 FYAL 179 (377)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 7654
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.96 E-value=8.5e-28 Score=196.76 Aligned_cols=229 Identities=13% Similarity=0.086 Sum_probs=142.8
Q ss_pred cccccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDP 101 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~ 101 (325)
+.+|..|+++.+.+..+ ...+++||++||++++...|..+++.|.+ +||+|+++|+||| |.|.... .
T Consensus 11 ~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~--------~G~~Vi~~D~rGh~G~S~g~~---~ 79 (302)
T d1thta_ 11 VNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLST--------NGFHVFRYDSLHHVGLSSGSI---D 79 (302)
T ss_dssp ETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHT--------TTCCEEEECCCBCC-----------
T ss_pred cCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHH--------CCCEEEEecCCCCCCCCCCcc---c
Confidence 46799999998866433 23567899999999999999999999998 8999999999998 8887654 5
Q ss_pred CCCHHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 102 PHDIANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
.+++.++.+|+..+++.+ +.+ +++|+||||||.+++.+|.. . .++++|+.++.+..
T Consensus 80 ~~~~~~~~~dl~~vi~~l~~~~~~-~i~lvG~SmGG~ial~~A~~--~--------~v~~li~~~g~~~~---------- 138 (302)
T d1thta_ 80 EFTMTTGKNSLCTVYHWLQTKGTQ-NIGLIAASLSARVAYEVISD--L--------ELSFLITAVGVVNL---------- 138 (302)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHTTT--S--------CCSEEEEESCCSCH----------
T ss_pred CCCHHHHHHHHHHHHHhhhccCCc-eeEEEEEchHHHHHHHHhcc--c--------ccceeEeecccccH----------
Confidence 778888888887776655 677 99999999999999999864 3 68899988765421
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCC--cccccccCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM--SYWPLLEHPPQ 256 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 256 (325)
............ .................. ..........+...... .....+..++
T Consensus 139 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 197 (302)
T d1thta_ 139 RDTLEKALGFDY-----------------LSLPIDELPNDLDFEGHK---LGSEVFVRDCFEHHWDTLDSTLDKVANTS- 197 (302)
T ss_dssp HHHHHHHHSSCG-----------------GGSCGGGCCSEEEETTEE---EEHHHHHHHHHHTTCSSHHHHHHHHTTCC-
T ss_pred HHHHHHHHhhcc-----------------chhhhhhccccccccccc---hhhHHHHHHHHHhHHHHHHHHHHHHhhcC-
Confidence 111111111000 000000000000000000 00000011111111000 0112344444
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG 313 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 313 (325)
+|+++++|++|++++++.++.+.+.++. +++++++++|+||.+. |+|+.
T Consensus 198 -~PvLii~G~~D~~V~~~~~~~l~~~i~s------~~~kl~~~~g~~H~l~-e~~~~ 246 (302)
T d1thta_ 198 -VPLIAFTANNDDWVKQEEVYDMLAHIRT------GHCKLYSLLGSSHDLG-ENLVV 246 (302)
T ss_dssp -SCEEEEEETTCTTSCHHHHHHHHTTCTT------CCEEEEEETTCCSCTT-SSHHH
T ss_pred -CCEEEEEeCCCCccCHHHHHHHHHhCCC------CCceEEEecCCCcccc-cChHH
Confidence 8999999999999999888777766653 2489999999999874 55543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=1.6e-24 Score=181.29 Aligned_cols=225 Identities=11% Similarity=0.039 Sum_probs=151.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|..+.+.+.. ....|+||++||+.++...|..+...|.+ +||.|+++|+||||.|..... .....
T Consensus 114 dg~~l~g~l~~P~~-~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~--------~G~~vl~~D~~G~G~s~~~~~--~~~~~ 182 (360)
T d2jbwa1 114 DGIPMPVYVRIPEG-PGPHPAVIMLGGLESTKEESFQMENLVLD--------RGMATATFDGPGQGEMFEYKR--IAGDY 182 (360)
T ss_dssp TTEEEEEEEECCSS-SCCEEEEEEECCSSCCTTTTHHHHHHHHH--------TTCEEEEECCTTSGGGTTTCC--SCSCH
T ss_pred CCcccceEEEecCC-CCCceEEEEeCCCCccHHHHHHHHHHHHh--------cCCEEEEEccccccccCcccc--ccccH
Confidence 67788877666533 34578999999999999888888888887 899999999999999976554 35567
Q ss_pred HHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
+..+..+.+++... +.+ ++.++||||||.+++.+|...| +|+++|.+++..................
T Consensus 183 ~~~~~~v~d~l~~~~~vd~~-rI~l~G~S~GG~~Al~~A~~~p---------ri~a~V~~~~~~~~~~~~~~~~~~~~~~ 252 (360)
T d2jbwa1 183 EKYTSAVVDLLTKLEAIRND-AIGVLGRSLGGNYALKSAACEP---------RLAACISWGGFSDLDYWDLETPLTKESW 252 (360)
T ss_dssp HHHHHHHHHHHHHCTTEEEE-EEEEEEETHHHHHHHHHHHHCT---------TCCEEEEESCCSCSTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccc-ceeehhhhcccHHHHHHhhcCC---------CcceEEEEcccccHHHHhhhhhhhhHHH
Confidence 77777777777655 345 8999999999999999999887 5999999887643321110000000000
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
... .. ..... ........ ..+....+.+++ +|+|+
T Consensus 253 ~~~-----------------~~---~~~~~--------------------~~~~~~~~---~~~~~~~~~~i~--~P~Li 287 (360)
T d2jbwa1 253 KYV-----------------SK---VDTLE--------------------EARLHVHA---ALETRDVLSQIA--CPTYI 287 (360)
T ss_dssp HHH-----------------TT---CSSHH--------------------HHHHHHHH---HTCCTTTGGGCC--SCEEE
T ss_pred HHh-----------------cc---CCchH--------------------HHHHHHHh---hcchhhhHhhCC--CCEEE
Confidence 000 00 00000 00000001 111223344554 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|++|. ++++..+.+.+.++. ++.+++++++++|.. .+++.+....|.+||..
T Consensus 288 i~G~~D~-vp~~~~~~l~~~~~~------~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~ 341 (360)
T d2jbwa1 288 LHGVHDE-VPLSFVDTVLELVPA------EHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYD 341 (360)
T ss_dssp EEETTSS-SCTHHHHHHHHHSCG------GGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHH
T ss_pred EEeCCCC-cCHHHHHHHHHhcCC------CCeEEEEECCCCcCC-CcChHHHHHHHHHHHHH
Confidence 9999997 588888777776654 237888899999965 45677777788888754
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.93 E-value=7.4e-25 Score=177.43 Aligned_cols=222 Identities=18% Similarity=0.175 Sum_probs=140.3
Q ss_pred CCCCCceEEEecCC--CCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HH
Q 020518 40 DRPYTSTAFVLHGL--LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLAN-LV 116 (325)
Q Consensus 40 ~~~~~~~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~-~l 116 (325)
..+.+++|||+||+ +++...|..+++.|. .+++|+++|+||||.|..........+++++++++.+ ++
T Consensus 56 ~~~~~~~l~c~~~~~~~g~~~~y~~la~~L~---------~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~ 126 (283)
T d2h7xa1 56 RAEGRAVLVGCTGTAANGGPHEFLRLSTSFQ---------EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAIL 126 (283)
T ss_dssp --CCCCEEEEECCCCTTCSTTTTHHHHHTTT---------TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHH
T ss_pred CCCCCceEEEeCCCCCCCCHHHHHHHHHhcC---------CCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHH
Confidence 33567899999995 466788999998888 6789999999999998876532234689999998766 55
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH-HHhhcCCCCCCcH
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL-QTLQSLPSSIPSR 195 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 195 (325)
+..+.. +++|+||||||.+|+++|.+.++.. ...|.++|++++.+..... ......... ..+..........
T Consensus 127 ~~~~~~-P~vL~GhS~GG~vA~e~A~~l~~~~----g~~v~~LvL~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 199 (283)
T d2h7xa1 127 RAAGDA-PVVLLGHSGGALLAHELAFRLERAH----GAPPAGIVLVDPYPPGHQE--PIEVWSRQLGEGLFAGELEPMSD 199 (283)
T ss_dssp HHHTTS-CEEEEEETHHHHHHHHHHHHHHHHH----SCCCSEEEEESCCCTTCCH--HHHHTHHHHHHHHHHTCSSCCCH
T ss_pred HhcCCC-ceEEEEeccchHHHHHHHHhhHHHc----CCCceEEEEecCCcccccc--chhhhhhhhHHHhhccccccccc
Confidence 666766 9999999999999999998865300 1179999999986543211 000000000 0000000000000
Q ss_pred HHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH
Q 020518 196 KWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV 275 (325)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 275 (325)
. .+.. ......++..+. ... .++|+++|+|++|..+++..
T Consensus 200 ~-----------------~l~a--------------~~~~~~~~~~~~-------~~~--~~~Pvl~i~g~~d~~~~~~~ 239 (283)
T d2h7xa1 200 A-----------------RLLA--------------MGRYARFLAGPR-------PGR--SSAPVLLVRASEPLGDWQEE 239 (283)
T ss_dssp H-----------------HHHH--------------HHHHHHHHHSCC-------CCC--CCSCEEEEEESSCSSCCCGG
T ss_pred H-----------------HHHH--------------HHHHHHHHhhcc-------ccc--cCCCeEEEEeCCCCCCCHHH
Confidence 0 0000 001111111111 122 34899999999999888765
Q ss_pred HHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhcC
Q 020518 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIASV 325 (325)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 325 (325)
...+.+.... ..+++.+++ ||+.++ |+|+.+++.|.+||+++
T Consensus 240 ~~~w~~~~~~-------~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 240 RGDWRAHWDL-------PHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp GCCCSCCCSS-------CSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-------CcEEEEEcC-CCcccccCCHHHHHHHHHHHHHhc
Confidence 4433332221 278999997 998665 67999999999999863
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.5e-25 Score=180.16 Aligned_cols=106 Identities=17% Similarity=0.114 Sum_probs=79.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|.+...+. ++++||||+||+++++..|..+++.|. ++|+++|+||+|.|. ++
T Consensus 11 ~~~~l~~l~~~~----~~~~Pl~l~Hg~~gs~~~~~~l~~~L~-----------~~v~~~d~~g~~~~~---------~~ 66 (286)
T d1xkta_ 11 EGPTLMRLNSVQ----SSERPLFLVHPIEGSTTVFHSLASRLS-----------IPTYGLQCTRAAPLD---------SI 66 (286)
T ss_dssp TSCSEEECCCCC----CCSCCEEEECCTTCCCGGGHHHHHTCS-----------SCEEEECCCTTSCCS---------CH
T ss_pred CCCEEEEecCCC----CCCCeEEEECCCCccHHHHHHHHHHcC-----------CeEEEEeCCCCCCCC---------CH
Confidence 456666555444 357789999999999999998876553 589999999998763 56
Q ss_pred HHHHHHHHHHHHHh-CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEec
Q 020518 106 ANAANDLANLVKAK-GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDS 164 (325)
Q Consensus 106 ~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~ 164 (325)
+++++++...+... +.+ +++|+||||||.+|+.+|.++|+ ++.++++++.
T Consensus 67 ~~~a~~~~~~~~~~~~~~-~~~lvGhS~Gg~vA~~~A~~~p~--------~~~~v~~l~~ 117 (286)
T d1xkta_ 67 HSLAAYYIDCIRQVQPEG-PYRVAGYSYGACVAFEMCSQLQA--------QQSPAPTHNS 117 (286)
T ss_dssp HHHHHHHHHHHHHHCCSS-CCEEEEETHHHHHHHHHHHHHHH--------C------CCE
T ss_pred HHHHHHHHHHHHHhcCCC-ceEEeecCCccHHHHHHHHHHHH--------cCCCceeEEE
Confidence 78888877666555 555 99999999999999999999999 8888776653
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.92 E-value=3.1e-23 Score=159.51 Aligned_cols=184 Identities=19% Similarity=0.215 Sum_probs=126.7
Q ss_pred ceEEEEcccCCCCC-CCceEEEecCC---CCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSDRP-YTSTAFVLHGL---LGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 29 ~l~y~~~~~~~~~~-~~~~vv~~HG~---~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|......+.+..+ ..+.+|++|+. +++..+ +..++..|++ .||.|+.+|+||+|.|.....
T Consensus 19 ~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~--------~G~~vlrfd~RG~G~S~g~~~---- 86 (218)
T d2fuka1 19 PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRE--------LGITVVRFNFRSVGTSAGSFD---- 86 (218)
T ss_dssp EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHT--------TTCEEEEECCTTSTTCCSCCC----
T ss_pred cEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHH--------cCCeEEEeecCCCccCCCccC----
Confidence 56655544433323 34456889954 333332 4456777776 899999999999999988542
Q ss_pred CCHHHHHHHHHHHHH----HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 103 HDIANAANDLANLVK----AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+....++|+.++++ +...+ +++++||||||.+++.+|.+. .++++|+++++....
T Consensus 87 -~~~~~~~D~~a~~~~~~~~~~~~-~v~l~G~S~Gg~va~~~a~~~----------~~~~lil~ap~~~~~--------- 145 (218)
T d2fuka1 87 -HGDGEQDDLRAVAEWVRAQRPTD-TLWLAGFSFGAYVSLRAAAAL----------EPQVLISIAPPAGRW--------- 145 (218)
T ss_dssp -TTTHHHHHHHHHHHHHHHHCTTS-EEEEEEETHHHHHHHHHHHHH----------CCSEEEEESCCBTTB---------
T ss_pred -cCcchHHHHHHHHHHHhhcccCc-eEEEEEEcccchhhhhhhccc----------ccceEEEeCCcccch---------
Confidence 22344455544443 33556 899999999999999998864 578999988642100
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGM 258 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (325)
+ .......+
T Consensus 146 -------------------------------------------------------------------~----~~~~~~~~ 154 (218)
T d2fuka1 146 -------------------------------------------------------------------D----FSDVQPPA 154 (218)
T ss_dssp -------------------------------------------------------------------C----CTTCCCCS
T ss_pred -------------------------------------------------------------------h----hhcccccc
Confidence 0 00011237
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|+|+|++|.+++++..+.+.+.+.. ..+++++||++|++. .+-+++.+.+.+|+++
T Consensus 155 P~Lvi~G~~D~~vp~~~~~~l~~~~~~-------~~~l~~i~ga~H~f~-~~~~~l~~~~~~~v~~ 212 (218)
T d2fuka1 155 QWLVIQGDADEIVDPQAVYDWLETLEQ-------QPTLVRMPDTSHFFH-RKLIDLRGALQHGVRR 212 (218)
T ss_dssp SEEEEEETTCSSSCHHHHHHHHTTCSS-------CCEEEEETTCCTTCT-TCHHHHHHHHHHHHGG
T ss_pred ceeeEecCCCcCcCHHHHHHHHHHccC-------CceEEEeCCCCCCCC-CCHHHHHHHHHHHHHH
Confidence 999999999999999877666544332 278999999999764 4556799999999875
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.92 E-value=3.2e-23 Score=170.25 Aligned_cols=283 Identities=14% Similarity=0.154 Sum_probs=179.3
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC---------hHHHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN---------WRSFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
+++..+....+|.|+.+|.... ...++||++|++.+++.. |..++-.=.... +..|.||++|..|
T Consensus 15 l~~G~~l~~~~laY~t~G~ln~-~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alD-----t~kyfVI~~n~lG 88 (357)
T d2b61a1 15 LMLGGKLSYINVAYQTYGTLND-EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALD-----TDRYFFISSNVLG 88 (357)
T ss_dssp CTTSCEECSEEEEEEEESCCCT-TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEE-----TTTCEEEEECCTT
T ss_pred cCCCCccCCceEEEEeecccCC-CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccC-----CCceEEEEecccC
Confidence 4455555668999999997533 335789999999987654 344421111110 2679999999999
Q ss_pred CCCCCCCCCC------------CCCCCHHHHHHHHHHHHHHhCCCCCE-EEEEeChhHHHHHHHHHHccccccCCccCCc
Q 020518 90 HGRSAEIEGL------------DPPHDIANAANDLANLVKAKGWDWPD-VVIGHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 90 ~G~S~~~~~~------------~~~~~~~~~~~~l~~~l~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
.|.++.++.. .+..++.|+++....+++++|++ ++ .+||.||||+.|+++|.+||+ +|
T Consensus 89 ~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~-~l~~viG~SmGGmqAl~wa~~~Pd--------~v 159 (357)
T d2b61a1 89 GCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS-HLKAIIGGSFGGMQANQWAIDYPD--------FM 159 (357)
T ss_dssp CSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC-CEEEEEEETHHHHHHHHHHHHSTT--------SE
T ss_pred CccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcc-eEEEEecccHHHHHHHHHHHhhhH--------HH
Confidence 8765433210 14579999999999999999999 76 677999999999999999999 99
Q ss_pred ceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC---------CCCcH-HHHHHHHHh--hccchhHHHHHhhcccCCC-
Q 020518 157 KQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS---------SIPSR-KWLVNHMME--LGFSKSLSEWIGTNLKKSG- 223 (325)
Q Consensus 157 ~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 223 (325)
+++|.+++.+..... ...........+..-+. ..+.. ....+.+.. ......+.+.+.+......
T Consensus 160 ~~~i~i~~~a~~s~~--~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~ 237 (357)
T d2b61a1 160 DNIVNLCSSIYFSAE--AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGS 237 (357)
T ss_dssp EEEEEESCCSSCCHH--HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCC
T ss_pred hhhcccccccccchh--HHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccc
Confidence 999999987543211 01111111122222111 01111 011111111 1111111121111111000
Q ss_pred ----------------cccccccChhHHHHhhhcccCC-------cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 224 ----------------ERETWAFNLDGAVQMFNSYREM-------SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 224 ----------------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
.+...+++...+..+....... ++...+.+++ +|+++|....|..+||+..+...
T Consensus 238 ~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~--a~vLvi~~~sD~lFpp~~~~~~a 315 (357)
T d2b61a1 238 FWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIK--ARYTLVSVTTDQLFKPIDLYKSK 315 (357)
T ss_dssp TTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCC--SEEEEEEETTCSSSCHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcC--CCEEEEEeCCccccCHHHHHHHH
Confidence 0111234455555444443332 3334467776 89999999999999999999999
Q ss_pred HHhhhcCCCCCCceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 281 GLANRQGDGSEGKVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.++..+. ++++++++. .||..++-+++++.+.|.+||++
T Consensus 316 ~~l~~~~~----~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 316 QLLEQSGV----DLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HHHHHTTC----EEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHhcCC----CeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 98887543 389999987 49999998899999999999975
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.92 E-value=9.6e-24 Score=173.69 Aligned_cols=282 Identities=17% Similarity=0.159 Sum_probs=182.9
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCC-------------ChHHHHHHHHhhhhccCCCCceEEEEe
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-------------NWRSFSRNLASTLSQTSASSEWRMVLV 85 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~~~vi~~ 85 (325)
+++..+....+|.|+.+|..+. ...++||++|++.+++. .|..++-.=...- ++.|.||++
T Consensus 18 le~G~~l~~~~l~Y~t~G~ln~-~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lD-----t~~yfVI~~ 91 (362)
T d2pl5a1 18 LNNGSVLSPVVIAYETYGTLSS-SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFD-----TNQYFIICS 91 (362)
T ss_dssp CTTSCEESSEEEEEEEEECCCT-TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEE-----TTTCEEEEE
T ss_pred cCCCCCcCCceEEEEeeeccCC-CCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccC-----ccccEEEee
Confidence 4455555668999999997433 33578999999988752 3444321100000 267999999
Q ss_pred CCCCCCCCCCCCCC------------CCCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCCc
Q 020518 86 DLRNHGRSAEIEGL------------DPPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 86 D~~G~G~S~~~~~~------------~~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
|..|.|.|+.++.. .+..++.|++.....+++++|++ ++. |+|.||||+.|+++|.+||+
T Consensus 92 n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~-~l~~viG~SmGGmqAl~wA~~yPd------ 164 (362)
T d2pl5a1 92 NVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE-KLFCVAGGSMGGMQALEWSIAYPN------ 164 (362)
T ss_dssp CCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS-SEEEEEEETHHHHHHHHHHHHSTT------
T ss_pred ccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcC-eeEEEeehhHHHHHHHHHHHhCch------
Confidence 99999877654321 13468999999999999999999 655 88999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCCCchhHHHH-HHHHhhcCCC--------CCCcHH-HHHHHHHh--hccchhHHHHHhhcc-
Q 020518 153 VALPKQLWVLDSVPGKVKTENSEGEVEK-VLQTLQSLPS--------SIPSRK-WLVNHMME--LGFSKSLSEWIGTNL- 219 (325)
Q Consensus 153 ~~~v~~lvli~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~- 219 (325)
.|+++|.+++.+.... ....+.. ....+..-+. ..+..- ...+.+.. ....+.+.+.+....
T Consensus 165 --~v~~~v~ia~sa~~s~---~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~ 239 (362)
T d2pl5a1 165 --SLSNCIVMASTAEHSA---MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPP 239 (362)
T ss_dssp --SEEEEEEESCCSBCCH---HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCC
T ss_pred --HhhhhcccccccccCH---HHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccc
Confidence 9999999998764421 1111111 1122222111 111110 11111111 111222222222211
Q ss_pred ---------------cCCCcccccccChhHHHHhhhcccCCcc------cccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 220 ---------------KKSGERETWAFNLDGAVQMFNSYREMSY------WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 220 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
.........+++...+..+.......+. ...+.+++ +|+|+|..+.|..+||+..+.
T Consensus 240 ~~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~--AkvLvi~~~sD~lFpp~~~~~ 317 (362)
T d2pl5a1 240 RGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNAT--CRFLVVSYSSDWLYPPAQSRE 317 (362)
T ss_dssp SSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCC--SEEEEEEETTCCSSCHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCC--CCEEEEEeCcccCcCHHHHHH
Confidence 1111222234555555555554444443 23467776 799999999999999999999
Q ss_pred HHHHhhhcCCCCCCceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.+.+++.+. ++++++++. .||..++.+++++.+.|.+||++
T Consensus 318 ~a~~l~~a~~----~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 318 IVKSLEAADK----RVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HHHHHHHTTC----CEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHhCCC----CeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 9999987654 378888875 69999999999999999999985
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.92 E-value=6.9e-24 Score=175.45 Aligned_cols=279 Identities=14% Similarity=0.087 Sum_probs=173.9
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
+++..+-...+|.|+.+|..+ ....++||++|++.+++. .|..++-.=...- +..|.||++|..|.|.++.
T Consensus 20 le~G~~l~~~~laY~t~G~ln-~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alD-----t~kyfVI~~n~lG~~~gst 93 (376)
T d2vata1 20 LESGVILRDVPVAYKSWGRMN-VSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFD-----TSRYFIICLNYLGSPFGSA 93 (376)
T ss_dssp CTTSCEEEEEEEEEEEESCCC-TTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBC-----TTTCEEEEECCTTCSSSSS
T ss_pred eCCCCCcCCceEEEEeecccC-CCCCCEEEEcCCCcCCccccccHHHhCCCCCccC-----ccceEEEEeccCCCCcCCC
Confidence 445555566789999999743 244678999999988774 3444321101000 2679999999999876543
Q ss_pred CCC-C-------------CCCCCHHHHHHHHHHHHHHhCCCCCE-EEEEeChhHHHHHHHHHHccccccCCccCCcceEE
Q 020518 96 IEG-L-------------DPPHDIANAANDLANLVKAKGWDWPD-VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLW 160 (325)
Q Consensus 96 ~~~-~-------------~~~~~~~~~~~~l~~~l~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lv 160 (325)
++. . .+.+++.|+++....+++++|++ ++ .|||.||||+.|+++|..||+ +|+++|
T Consensus 94 ~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~-~l~aViG~SmGGmqal~wa~~~Pd--------~v~~li 164 (376)
T d2vata1 94 GPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVR-QIAAVVGASMGGMHTLEWAFFGPE--------YVRKIV 164 (376)
T ss_dssp STTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCC-CEEEEEEETHHHHHHHHHGGGCTT--------TBCCEE
T ss_pred CCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcc-eEEEeecccHHHHHHHHHHHhchH--------HHhhhc
Confidence 221 0 13569999999999999999999 75 688999999999999999999 999999
Q ss_pred EEecCCCCCCCCCchhHHHHHHHHhhcCCC--------CCCcHH--HHHHHHH--hhccchhHHHHHhhc----------
Q 020518 161 VLDSVPGKVKTENSEGEVEKVLQTLQSLPS--------SIPSRK--WLVNHMM--ELGFSKSLSEWIGTN---------- 218 (325)
Q Consensus 161 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~---------- 218 (325)
.|++.+...... ..........+..-+. ...... ...+.+. .....+.+.+.+...
T Consensus 165 ~Ia~~~~~s~~~--~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~ 242 (376)
T d2vata1 165 PIATSCRQSGWC--AAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNIS 242 (376)
T ss_dssp EESCCSBCCHHH--HHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC------
T ss_pred ccccccccchHH--HHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccc
Confidence 999876432110 0000111111111110 000000 0011100 000011111111000
Q ss_pred -----------------------------ccCCCcccccccChhHHHHhhhcccCCc--------ccccccCCCCCCcEE
Q 020518 219 -----------------------------LKKSGERETWAFNLDGAVQMFNSYREMS--------YWPLLEHPPQGMEIA 261 (325)
Q Consensus 219 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~P~l 261 (325)
+.....+...+++...+..+.+.+...| +...+.+++ +|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~--a~~L 320 (376)
T d2vata1 243 SQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMIT--QPAL 320 (376)
T ss_dssp ---------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCC--SCEE
T ss_pred cchhhhcccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCC--CCEE
Confidence 0000111122344445544444444333 233466666 7999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEec-CCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLP-NAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|....|..+|++..+.+.+.+++ +++++++ ..||..++.+++.+.+.|.+||++
T Consensus 321 vI~~~sD~lFPp~~~~e~a~~l~~--------a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 321 IICARSDGLYSFDEHVEMGRSIPN--------SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EEECTTCSSSCHHHHHHHHHHSTT--------EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEEeCcccCcCHHHHHHHHHhcCC--------CeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 999999999999988888887776 9999998 479998888899999999999974
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.8e-24 Score=163.01 Aligned_cols=171 Identities=12% Similarity=0.121 Sum_probs=136.1
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
++||||+||++++...|..+.+.|.+ +||.++.+|.+|++.+... ...+.+++++++.+++++.+.+
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~--------~g~~~~~~~~~~~~~~~~~----~~~~~~~l~~~i~~~~~~~~~~- 68 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVS--------QGWSRDKLYAVDFWDKTGT----NYNNGPVLSRFVQKVLDETGAK- 68 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHH--------TTCCGGGEEECCCSCTTCC----HHHHHHHHHHHHHHHHHHHCCS-
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHH--------cCCeEEEEecCCccccccc----cchhhhhHHHHHHHHHHhcCCc-
Confidence 56899999999999999999999998 8999999999999988764 2456778888999999999999
Q ss_pred CEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
++++|||||||.++..++.++ |+ +|+++|+++++.......
T Consensus 69 ~v~lvGHSmGG~va~~~~~~~~~~~--------~V~~~V~l~~p~~g~~~~----------------------------- 111 (179)
T d1ispa_ 69 KVDIVAHSMGGANTLYYIKNLDGGN--------KVANVVTLGGANRLTTGK----------------------------- 111 (179)
T ss_dssp CEEEEEETHHHHHHHHHHHHSSGGG--------TEEEEEEESCCGGGTCSB-----------------------------
T ss_pred eEEEEeecCcCHHHHHHHHHcCCch--------hhCEEEEECCCCCCchhh-----------------------------
Confidence 999999999999999999887 55 899999998752110000
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 281 (325)
.+ .. ......+|++.|+|..|.++++...
T Consensus 112 ----------------~l-----------------------~~-------~~~~~~~~~~~i~~~~D~~v~~~~~----- 140 (179)
T d1ispa_ 112 ----------------AL-----------------------PG-------TDPNQKILYTSIYSSADMIVMNYLS----- 140 (179)
T ss_dssp ----------------CC-----------------------CC-------SCTTCCCEEEEEEETTCSSSCHHHH-----
T ss_pred ----------------hc-----------------------CC-------cccccCceEEEEEecCCcccCchhh-----
Confidence 00 00 0112237899999999999988543
Q ss_pred HhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.++. ++-+.++++||...+.+| ++.+.|.+||+.
T Consensus 141 ~l~~--------~~~~~~~~~~H~~l~~~~-~v~~~i~~~L~~ 174 (179)
T d1ispa_ 141 RLDG--------ARNVQIHGVGHIGLLYSS-QVNSLIKEGLNG 174 (179)
T ss_dssp CCBT--------SEEEEESSCCTGGGGGCH-HHHHHHHHHHTT
T ss_pred cCCC--------ceEEEECCCCchhhccCH-HHHHHHHHHHhc
Confidence 2333 788899999999988887 688899999863
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=6.4e-24 Score=161.45 Aligned_cols=180 Identities=9% Similarity=0.134 Sum_probs=123.4
Q ss_pred ceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 45 STAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
..||++||++++... |..+...|++ +||+|+++|+||+|.+ ..+++++.+...++..+ +
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~--------~G~~v~~~d~p~~~~~----------~~~~~~~~l~~~~~~~~-~ 62 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLA--------DGVQADILNMPNPLQP----------RLEDWLDTLSLYQHTLH-E 62 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHH--------TTCEEEEECCSCTTSC----------CHHHHHHHHHTTGGGCC-T
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHh--------CCCEEEEeccCCCCcc----------hHHHHHHHHHHHHhccC-C
Confidence 479999999988654 5668888887 8999999999999854 35677777766665443 5
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++|+||||||.+++.++.++|+ .....+++...+......... . .
T Consensus 63 -~~~lvGhS~Gg~~a~~~a~~~~~--------~~~~~~l~~~~~~~~~~~~~~-~-------~----------------- 108 (186)
T d1uxoa_ 63 -NTYLVAHSLGCPAILRFLEHLQL--------RAALGGIILVSGFAKSLPTLQ-M-------L----------------- 108 (186)
T ss_dssp -TEEEEEETTHHHHHHHHHHTCCC--------SSCEEEEEEETCCSSCCTTCG-G-------G-----------------
T ss_pred -CcEEEEechhhHHHHHHHHhCCc--------cceeeEEeecccccccchhhh-h-------h-----------------
Confidence 89999999999999999999997 444444444332211110000 0 0
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
...... ......... ...|+++|+|++|++++++..+.+.+.
T Consensus 109 --------------~~~~~~----------------------~~~~~~~~~--~~~p~lvi~g~~D~~vp~~~~~~l~~~ 150 (186)
T d1uxoa_ 109 --------------DEFTQG----------------------SFDHQKIIE--SAKHRAVIASKDDQIVPFSFSKDLAQQ 150 (186)
T ss_dssp --------------GGGTCS----------------------CCCHHHHHH--HEEEEEEEEETTCSSSCHHHHHHHHHH
T ss_pred --------------hhhhcc----------------------ccccccccc--CCCCEEEEecCCCCCCCHHHHHHHHHH
Confidence 000000 000000001 126999999999999999888877776
Q ss_pred hhhcCCCCCCceeEEEecCCCcccccc---ChHHHHHHHHHHHhc
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGLLEIVAPRIAS 324 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i~~fl~~ 324 (325)
+. +++++++++||+...+ .-.++.+.|.+||.+
T Consensus 151 ~~---------~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 151 ID---------AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp TT---------CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred cC---------CEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 53 7999999999987654 235789999999864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.1e-24 Score=171.41 Aligned_cols=206 Identities=13% Similarity=0.115 Sum_probs=121.1
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
++++|||+||++++...|..+++.|. +|.|+++|++|+|. .++++.+.+.++...
T Consensus 16 ~~~~l~~lhg~~g~~~~~~~la~~L~----------~~~v~~~~~~g~~~---------------~a~~~~~~i~~~~~~ 70 (230)
T d1jmkc_ 16 QEQIIFAFPPVLGYGLMYQNLSSRLP----------SYKLCAFDFIEEED---------------RLDRYADLIQKLQPE 70 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCT----------TEEEEEECCCCSTT---------------HHHHHHHHHHHHCCS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHCC----------CCEEeccCcCCHHH---------------HHHHHHHHHHHhCCC
Confidence 37899999999999999998877664 68999999998763 355566666666544
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceE---EEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQL---WVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l---vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (325)
++++|+||||||.+|+.+|.++|+ ++..+ +.+++................ ......
T Consensus 71 ~~~~lvGhS~GG~vA~~~A~~~~~--------~~~~v~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 129 (230)
T d1jmkc_ 71 GPLTLFGYSAGCSLAFEAAKKLEG--------QGRIVQRIIMVDSYKKQGVSDLDGRTVES-------------DVEALM 129 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHH--------TTCCEEEEEEESCCEECCCC--------C-------------CHHHHH
T ss_pred CcEEEEeeccChHHHHHHHHhhhh--------hCccceeeecccccCccchhhhhhhhhhh-------------hhhhhh
Confidence 489999999999999999999988 55444 444433211111000000000 000000
Q ss_pred HHHHhhc--cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 200 NHMMELG--FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 200 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
....... ........+.. ........... ......+ ++|+++|+|++|..+++...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~---~~~~~~i--~~p~l~i~g~~D~~~~~~~~- 187 (230)
T d1jmkc_ 130 NVNRDNEALNSEAVKHGLKQ----------------KTHAFYSYYVN---LISTGQV--KADIDLLTSGADFDIPEWLA- 187 (230)
T ss_dssp HHTTTCSGGGSHHHHHHHHH----------------HHHHHHHHHHH---CCCCSCB--SSEEEEEECSSCCCCCTTEE-
T ss_pred hccccccccccHHHHHHHHH----------------HHHHHHHhhhc---ccccccc--cCcceeeeecCCcccchhHH-
Confidence 0000000 00000000000 00011111000 1112223 48999999999998876432
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccccCh--HHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP--KGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~~ 324 (325)
.+.+.... +++++++++ ||+.+++.| +++++.|.+||++
T Consensus 188 ~w~~~~~~-------~~~~~~i~g-~H~~ml~~~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 188 SWEEATTG-------AYRMKRGFG-THAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp CSGGGBSS-------CEEEEECSS-CGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HHHHhccC-------CcEEEEEcC-CChhhcCCccHHHHHHHHHHHHhh
Confidence 22222221 388999995 999999866 9999999999975
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=2.8e-21 Score=159.08 Aligned_cols=233 Identities=12% Similarity=-0.013 Sum_probs=140.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC---
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP--- 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~--- 101 (325)
.+|.+|....+.+.. ....|+||++||++++...|...+..|++ +||.|+++|+||||.|..+.....
T Consensus 64 ~dg~~i~~~l~~P~~-~~~~P~vv~~HG~~~~~~~~~~~~~~la~--------~Gy~vi~~D~rG~G~s~~~~~~~~~~~ 134 (318)
T d1l7aa_ 64 FGNARITGWYAVPDK-EGPHPAIVKYHGYNASYDGEIHEMVNWAL--------HGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp GGGEEEEEEEEEESS-CSCEEEEEEECCTTCCSGGGHHHHHHHHH--------TTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred CCCcEEEEEEEecCC-CCCceEEEEecCCCCCccchHHHHHHHHH--------CCCEEEEEeeCCCCCCCCCcccchhhh
Confidence 467777766555532 24578999999999999999999999988 899999999999999987643110
Q ss_pred ------------CCCHHHHHHHHHHHHHHh---C---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 102 ------------PHDIANAANDLANLVKAK---G---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 102 ------------~~~~~~~~~~l~~~l~~~---~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
.......+.+....++.+ . .+ ++.++|+|+||..++..+...+. +.+++...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~-~i~~~G~s~Gg~~~~~~~~~~~~---------~~~~~~~~ 204 (318)
T d1l7aa_ 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDET-RIGVTGGSQGGGLTIAAAALSDI---------PKAAVADY 204 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEE-EEEEEEETHHHHHHHHHHHHCSC---------CSEEEEES
T ss_pred hcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCc-ceEEEeeccccHHHHHHhhcCcc---------cceEEEec
Confidence 111223344444433332 2 23 68999999999999999999875 77766555
Q ss_pred cCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhccc
Q 020518 164 SVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (325)
+.... ........ ...... .............. ....+....
T Consensus 205 ~~~~~---------~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~------------------------~~~~~~~~~ 246 (318)
T d1l7aa_ 205 PYLSN---------FERAIDVA---LEQPYL--EINSFFRRNGSPET------------------------EVQAMKTLS 246 (318)
T ss_dssp CCSCC---------HHHHHHHC---CSTTTT--HHHHHHHHSCCHHH------------------------HHHHHHHHH
T ss_pred ccccc---------HHHHhhcc---cccccc--hhhhhhhccccccc------------------------ccccccccc
Confidence 43211 01111110 000000 00000000000000 000000001
Q ss_pred CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 244 EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.......+++++ +|+|+|+|++|..++++....+.+.++. +.++++++++||....+..+++.+.+.++|+
T Consensus 247 ~~~~~~~~~~i~--~P~Lii~G~~D~~vp~~~~~~~~~~l~~-------~~~l~~~~~~gH~~~~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 247 YFDIMNLADRVK--VPVLMSIGLIDKVTPPSTVFAAYNHLET-------KKELKVYRYFGHEYIPAFQTEKLAFFKQILK 317 (318)
T ss_dssp TTCHHHHGGGCC--SCEEEEEETTCSSSCHHHHHHHHHHCCS-------SEEEEEETTCCSSCCHHHHHHHHHHHHHHHC
T ss_pred ccccccccccCC--CCEEEEEECCCCCcCHHHHHHHHHHcCC-------CcEEEEECCCCCCCcHHHHHHHHHHHHHhCC
Confidence 111122234444 8999999999999999887777665542 3899999999998765555555555555553
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.88 E-value=3.6e-21 Score=151.92 Aligned_cols=203 Identities=13% Similarity=0.089 Sum_probs=127.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC-CHHHHH-------HHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH-DIANAA-------NDLAN 114 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~-------~~l~~ 114 (325)
.+|+||++||++++...|..+++.|++ .||.|+++|+||||.|.......... ...... +++..
T Consensus 23 ~~~~vl~lHG~~~~~~~~~~~~~~la~--------~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (238)
T d1ufoa_ 23 PKALLLALHGLQGSKEHILALLPGYAE--------RGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARR 94 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGG--------GTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHH--------CCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHH
Confidence 478999999999999999888888887 89999999999999998765311111 122222 22222
Q ss_pred HHH---HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 020518 115 LVK---AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191 (325)
Q Consensus 115 ~l~---~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (325)
++. ....+ ++.++|||+||.+++.++.++|+ +...+.+.+......... ..
T Consensus 95 ~~~~~~~~~~~-~v~~~G~S~Gg~~a~~~~~~~p~---------~~~~~~~~~~~~~~~~~~----------------~~ 148 (238)
T d1ufoa_ 95 VAEEAERRFGL-PLFLAGGSLGAFVAHLLLAEGFR---------PRGVLAFIGSGFPMKLPQ----------------GQ 148 (238)
T ss_dssp HHHHHHHHHCC-CEEEEEETHHHHHHHHHHHTTCC---------CSCEEEESCCSSCCCCCT----------------TC
T ss_pred HhhhccccCCc-eEEEEEecccHHHHHHHHhcCcc---------hhheeeeeeecccccccc----------------cc
Confidence 222 23446 89999999999999999999986 555554443322111000 00
Q ss_pred CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
....... ..+... +........ .++|+++++|++|..+
T Consensus 149 ~~~~~~~-------------~~~~~~----------------------------~~~~~~~~~-~~~P~li~~G~~D~~v 186 (238)
T d1ufoa_ 149 VVEDPGV-------------LALYQA----------------------------PPATRGEAY-GGVPLLHLHGSRDHIV 186 (238)
T ss_dssp CCCCHHH-------------HHHHHS----------------------------CGGGCGGGG-TTCCEEEEEETTCTTT
T ss_pred ccccccc-------------cchhhh----------------------------hhhhhhhhh-cCCCeEEEEcCCCCcc
Confidence 0000000 000000 000000111 1269999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+++....+.+.+...+.. .++++.+++|+||.+.-+.-+...+.+.+||+
T Consensus 187 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 187 PLARMEKTLEALRPHYPE--GRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp THHHHHHHHHHHGGGCTT--CCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCC--ceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 999888888877654321 23788999999998865555566666666665
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.88 E-value=3.3e-21 Score=153.24 Aligned_cols=211 Identities=16% Similarity=0.170 Sum_probs=133.4
Q ss_pred CCceEEEecCC--CCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 43 YTSTAFVLHGL--LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 43 ~~~~vv~~HG~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
.+++|+|+||+ +++...|..++..|. ..+.|+++|+||+|.+... ..+++++++++.+.|....
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~---------~~~~V~al~~pG~~~~e~~-----~~s~~~~a~~~~~~i~~~~ 106 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALR---------GIAPVRAVPQPGYEEGEPL-----PSSMAAVAAVQADAVIRTQ 106 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHT---------TTCCEEEECCTTSSTTCCE-----ESSHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcC---------CCceEEEEeCCCcCCCCCC-----CCCHHHHHHHHHHHHHHhC
Confidence 47899999994 567789999999988 5689999999999988653 5689999999987776554
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
..++++|+||||||.+|+++|.+.++ ....|..++++++.+... ......+...+........
T Consensus 107 ~~~P~~L~GhS~Gg~vA~e~A~~l~~-----~g~~v~~lvlld~~~p~~-----~~~~~~~~~~~~~~~~~~~------- 169 (255)
T d1mo2a_ 107 GDKPFVVAGHSAGALMAYALATELLD-----RGHPPRGVVLIDVYPPGH-----QDAMNAWLEELTATLFDRE------- 169 (255)
T ss_dssp SSSCEEEEECSTTHHHHHHHHHHHHH-----HTCCCSEEEEEECSCSSH-----HHHHHHHHHHHHTTCC----------
T ss_pred CCCCEEEEEeCCcHHHHHHHHHhhHh-----cCCCccEEEEECCCCCCC-----ccchhhHHHHHHHHhhccc-------
Confidence 34499999999999999999988765 112699999999864321 1111111111111000000
Q ss_pred HHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
..... ..++. .......++..+. ..+..+|++++.+.+|....+. .
T Consensus 170 ---~~~~~---~~~l~--------------a~~~~~~~~~~~~---------~~~~~~p~l~v~a~~~~~~~~~--~--- 215 (255)
T d1mo2a_ 170 ---TVRMD---DTRLT--------------ALGAYDRLTGQWR---------PRETGLPTLLVSAGEPMGPWPD--D--- 215 (255)
T ss_dssp ----CCCC---HHHHH--------------HHHHHHHHHHHCC---------CCCCCCCEEEEECCSSSSCCTT--C---
T ss_pred ---cccCC---HHHHH--------------HHHHHHHHHhcCC---------CccccceEEEeecCCCCCcchh--h---
Confidence 00000 00000 0111112222221 1123479999998877543332 1
Q ss_pred HHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHh
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIA 323 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 323 (325)
.+..... ..++++.+++ +|+.++ ++++.+++.|.+||.
T Consensus 216 ~w~~~~~----~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 216 SWKPTWP----FEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp CCCCCCC----SSCEEEECCS-CCSSCSSCCHHHHHHHHHHHHT
T ss_pred HHHHhCC----CCcEEEEECC-CCcccccccHHHHHHHHHHHhC
Confidence 1222222 2389999997 999555 589999999999985
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.88 E-value=2.5e-21 Score=154.94 Aligned_cols=229 Identities=16% Similarity=0.166 Sum_probs=145.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecC--CCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHG--LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|.+|....+.+.....+.|+||++|| +......|......|++ +||.|+++|+||++.+.........
T Consensus 20 ~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~--------~G~~v~~~d~r~~~~~g~~~~~~~~ 91 (260)
T d2hu7a2 20 FDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAA--------AGFHVVMPNYRGSTGYGEEWRLKII 91 (260)
T ss_dssp TTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHH--------HTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred CCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHh--------hccccccceeeeccccccccccccc
Confidence 5788888777666544456789999998 44455678888888887 8999999999998766432110011
Q ss_pred -----CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 -----HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 -----~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
..++++.+.+..+.+....+ ++.++|+|+||.+++.++..+|+ .+++++..++....
T Consensus 92 ~~~~~~~~~D~~~~~~~l~~~~~~~-~~~i~g~s~gg~~~~~~~~~~~~--------~~~a~i~~~~~~~~--------- 153 (260)
T d2hu7a2 92 GDPCGGELEDVSAAARWARESGLAS-ELYIMGYSYGGYMTLCALTMKPG--------LFKAGVAGASVVDW--------- 153 (260)
T ss_dssp TCTTTHHHHHHHHHHHHHHHTTCEE-EEEEEEETHHHHHHHHHHHHSTT--------SSSEEEEESCCCCH---------
T ss_pred cccchhhhhhhcccccccccccccc-eeeccccccccccccchhccCCc--------ccccccccccchhh---------
Confidence 11233333333333333445 89999999999999999999999 89998887765321
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
...... .......+....... +...+. ..+....+++++
T Consensus 154 -~~~~~~----------------------~~~~~~~~~~~~~~~---------~~~~~~-------~~~~~~~~~~~~-- 192 (260)
T d2hu7a2 154 -EEMYEL----------------------SDAAFRNFIEQLTGG---------SREIMR-------SRSPINHVDRIK-- 192 (260)
T ss_dssp -HHHHHT----------------------CCHHHHHHHHHHHCS---------CHHHHH-------HTCGGGCGGGCC--
T ss_pred -hhhhcc----------------------ccccccccccccccc---------cccccc-------ccchhhcccccC--
Confidence 111000 000000000000000 000000 111122234444
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
+|+|+++|++|..+++.....+.+.+...+. +++++++|++||.+. .|+..++.+.+.+||++
T Consensus 193 ~P~liihG~~D~~vp~~~~~~~~~~l~~~~~----~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~ 256 (260)
T d2hu7a2 193 EPLALIHPQNDSRTPLKPLLRLMGELLARGK----TFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT 256 (260)
T ss_dssp SCEEEEEETTCSSSCSHHHHHHHHHHHHTTC----CEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHH
T ss_pred CCceeeecccCceecHHHHHHHHHHHHHCCC----CeEEEEECcCCCCCCChHhHHHHHHHHHHHHHH
Confidence 7999999999999999988888887766443 389999999999764 36667777788889864
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.88 E-value=3.7e-23 Score=142.71 Aligned_cols=94 Identities=17% Similarity=0.241 Sum_probs=81.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|+|.+.|. +|||||+||.. ..|. +.|. ++|+|+++|+||||.|+. ..++.
T Consensus 9 ~G~~l~y~~~G~------G~pvlllHG~~---~~w~---~~L~---------~~yrvi~~DlpG~G~S~~-----p~~s~ 62 (122)
T d2dsta1 9 YGLNLVFDRVGK------GPPVLLVAEEA---SRWP---EALP---------EGYAFYLLDLPGYGRTEG-----PRMAP 62 (122)
T ss_dssp TTEEEEEEEECC------SSEEEEESSSG---GGCC---SCCC---------TTSEEEEECCTTSTTCCC-----CCCCH
T ss_pred CCEEEEEEEEcC------CCcEEEEeccc---cccc---cccc---------CCeEEEEEeccccCCCCC-----ccccc
Confidence 688999999996 78999999943 3342 3344 899999999999999976 36899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+++++++.+++++++++ +++++||||||.+++++++..++
T Consensus 63 ~~~a~~i~~ll~~L~i~-~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 63 EELAHFVAGFAVMMNLG-APWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHHHHHTTCC-SCEEEECGGGGGGHHHHHHTTCC
T ss_pred chhHHHHHHHHHHhCCC-CcEEEEeCccHHHHHHHHhhccc
Confidence 99999999999999999 99999999999999999997654
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.83 E-value=5.4e-23 Score=169.42 Aligned_cols=237 Identities=11% Similarity=0.086 Sum_probs=130.9
Q ss_pred CCCceEEEecCCCCCCCChHH-------HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRS-------FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~ 114 (325)
++++||||+||++.++..|.. ++..+.+ +||+|+++|+||||.|..+. ..++..++++++.+
T Consensus 56 ~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~--------~Gy~V~~~D~~G~G~S~~~~---~~~~~~~~~~~~~~ 124 (318)
T d1qlwa_ 56 AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLR--------KGYSTYVIDQSGRGRSATDI---SAINAVKLGKAPAS 124 (318)
T ss_dssp CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHH--------TTCCEEEEECTTSTTSCCCC---HHHHHHHTTSSCGG
T ss_pred CCCCcEEEECCCCCCcCccccCcccchhHHHHHHh--------CCCEEEEecCCCCCCCCCcc---ccCCHHHHHHHHHH
Confidence 357789999999999988864 5666776 89999999999999998754 34556666666666
Q ss_pred HHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 020518 115 LVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP 193 (325)
Q Consensus 115 ~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (325)
.++.+... .+..++|||+||.++..++...+. .....+++.+..+....................
T Consensus 125 ~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 190 (318)
T d1qlwa_ 125 SLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFP-------VQAQAELWQQMVPDWLGSMPTPNPTVANLSKLA------- 190 (318)
T ss_dssp GSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSC-------GGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHH-------
T ss_pred HHHHHhhcccccccccccchhHHHHHHhhhcCc-------cccceeeEeccccccccchhhhhhhHHHHHHHH-------
Confidence 66655332 157788999999998888876543 022222222222222111111111111110000
Q ss_pred cHHHHHHHHHhhc----cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 194 SRKWLVNHMMELG----FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 194 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
....... .......+............... ...............+ .+|+|+++|++|.
T Consensus 191 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~P~Lii~G~~D~ 253 (318)
T d1qlwa_ 191 ------IKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVS---------VEPGECPKPEDVKPLT--SIPVLVVFGDHIE 253 (318)
T ss_dssp ------HHHTSEEEEEEGGGTTHHHHHHHHCCTTEEEEEE---------ESCSCCCCGGGCGGGT--TSCEEEEECSSCT
T ss_pred ------hhhccccchhhhcccchhhhhhhhhhhHHHHHHh---------hhcccccchhhhhhhc--cCCEEEEecCcCc
Confidence 0000000 00000000000000000000000 0000111112222223 3899999999999
Q ss_pred CCChHH-----HHHHHHHhhhcCCCCCCceeEEEec-----CCCccccccCh-HHHHHHHHHHHhc
Q 020518 270 RWDPDV-----IQRLEGLANRQGDGSEGKVSVHVLP-----NAGHWVHVDNP-KGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~gH~~~~e~p-~~~~~~i~~fl~~ 324 (325)
.+++.. .+.+.+.+...+. +++++.+| |+||++++|.+ +++++.|.+||++
T Consensus 254 ~~p~~~~~~~~~~~~~~~l~~~g~----~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~ 315 (318)
T d1qlwa_ 254 EFPRWAPRLKACHAFIDALNAAGG----KGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGR 315 (318)
T ss_dssp TCTTTHHHHHHHHHHHHHHHHTTC----CEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHH
T ss_pred ccChhhhHHHHHHHHHHHHHHhCC----CcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHh
Confidence 998633 3334444544332 38898865 67899999875 9999999999975
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.83 E-value=3.5e-19 Score=146.79 Aligned_cols=214 Identities=12% Similarity=0.029 Sum_probs=126.5
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD---- 100 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~---- 100 (325)
.+|.+|+...+.+.......|+||++||++.+...|.... .+++ +||.|+++|+||||.|.......
T Consensus 63 ~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~-~~a~--------~G~~v~~~D~rG~G~s~~~~~~~~~~~ 133 (322)
T d1vlqa_ 63 YRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWL-FWPS--------MGYICFVMDTRGQGSGWLKGDTPDYPE 133 (322)
T ss_dssp GGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGC-HHHH--------TTCEEEEECCTTCCCSSSCCCCCBCCS
T ss_pred CCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHH-HHHh--------CCCEEEEeeccccCCCCCCcccccccc
Confidence 4688888777766443445689999999988887776544 4555 89999999999999986543210
Q ss_pred ------------------CCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCc
Q 020518 101 ------------------PPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 101 ------------------~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
........+.|....++.+ +.+ ++.++|+|+||.+++..+...| ++
T Consensus 134 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~-ri~~~G~S~GG~~a~~~~~~~~---------~~ 203 (322)
T d1vlqa_ 134 GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQE-RIVIAGGSQGGGIALAVSALSK---------KA 203 (322)
T ss_dssp SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHCS---------SC
T ss_pred ccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCch-hccccccccchHHHHHHHhcCC---------Cc
Confidence 0111223344554444443 223 6899999999999999888776 58
Q ss_pred ceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHH
Q 020518 157 KQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAV 236 (325)
Q Consensus 157 ~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (325)
++++...+..... ..... .. ... ............. .. .....
T Consensus 204 ~a~v~~~~~~~~~---------~~~~~-~~---~~~-~~~~~~~~~~~~~--~~---------------------~~~~~ 246 (322)
T d1vlqa_ 204 KALLCDVPFLCHF---------RRAVQ-LV---DTH-PYAEITNFLKTHR--DK---------------------EEIVF 246 (322)
T ss_dssp CEEEEESCCSCCH---------HHHHH-HC---CCT-THHHHHHHHHHCT--TC---------------------HHHHH
T ss_pred cEEEEeCCccccH---------HHHHh-hc---ccc-chhhHHhhhhcCc--ch---------------------hhhHH
Confidence 8888766543211 11100 00 000 0000000000000 00 00000
Q ss_pred HhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc
Q 020518 237 QMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV 306 (325)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 306 (325)
. .....+......+++ +|+|+++|.+|.+++++.+..+.+.+.. +++++++|++||..
T Consensus 247 ~---~~~~~d~~~~a~~i~--~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-------~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 247 R---TLSYFDGVNFAARAK--IPALFSVGLMDNICPPSTVFAAYNYYAG-------PKEIRIYPYNNHEG 304 (322)
T ss_dssp H---HHHTTCHHHHHTTCC--SCEEEEEETTCSSSCHHHHHHHHHHCCS-------SEEEEEETTCCTTT
T ss_pred H---HhhhhhHHHHHhcCC--CCEEEEEeCCCCCcCHHHHHHHHHHCCC-------CeEEEEECCCCCCC
Confidence 0 011112222334454 8999999999999999877655554432 28999999999954
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2.4e-19 Score=140.16 Aligned_cols=184 Identities=15% Similarity=0.085 Sum_probs=123.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC---------C-----CCCCCCCCCCC---
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR---------S-----AEIEGLDPPHD--- 104 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~---------S-----~~~~~~~~~~~--- 104 (325)
+..++|||+||+|++...|..+...+.. .++.+++++-|.+.. + ....+ ....
T Consensus 19 ~~~~~VI~lHG~G~~~~~~~~~~~~l~~--------~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~--~~~~~~~ 88 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGHGWAEAFAGIRS--------SHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPD--SQEDESG 88 (229)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTCC--------TTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTT--CCBCHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHhcC--------CCCEEEeCCCCCCccccCCCccccccccccccccc--chhhhHH
Confidence 3467899999999999888777766654 789999988653211 1 11111 1122
Q ss_pred HHHHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 105 IANAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
+++.++.+..+++.. ..+ +++++|+|+||.+|+.++.++|+ ++.+++.+++.......
T Consensus 89 i~~~~~~l~~li~~~~~~~i~~~-ri~l~GfS~Gg~~a~~~~~~~~~--------~~~gvi~~sg~lp~~~~-------- 151 (229)
T d1fj2a_ 89 IKQAAENIKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTALTTQQ--------KLAGVTALSCWLPLRAS-------- 151 (229)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGG-GEEEEEETHHHHHHHHHHTTCSS--------CCSEEEEESCCCTTGGG--------
T ss_pred HHHHHHHHHHHhhhhhhcCCCcc-ceeeeecccchHHHHHHHHhhcc--------ccCcccccccccccccc--------
Confidence 444555555555532 344 89999999999999999999999 99999998864211000
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCc
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGME 259 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (325)
.. .........++|
T Consensus 152 ---------------------------------------~~---------------------------~~~~~~~~~~~P 165 (229)
T d1fj2a_ 152 ---------------------------------------FP---------------------------QGPIGGANRDIS 165 (229)
T ss_dssp ---------------------------------------SC---------------------------SSCCCSTTTTCC
T ss_pred ---------------------------------------cc---------------------------ccccccccccCc
Confidence 00 000011122379
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++++|++|.+++.+..+...+.+....+ ..++++++++++||.+. ++ ..+.+.+||++
T Consensus 166 vli~hG~~D~~vp~~~~~~~~~~L~~~~~--~~~v~~~~~~g~gH~i~---~~-~~~~~~~wL~~ 224 (229)
T d1fj2a_ 166 ILQCHGDCDPLVPLMFGSLTVEKLKTLVN--PANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDK 224 (229)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHHHHHSC--GGGEEEEEETTCCSSCC---HH-HHHHHHHHHHH
T ss_pred eeEEEcCCCCeeCHHHHHHHHHHHHhcCC--CCceEEEEeCCCCCccC---HH-HHHHHHHHHHh
Confidence 99999999999999888877777654321 02389999999999764 33 34567788864
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.80 E-value=2.7e-18 Score=132.25 Aligned_cols=186 Identities=18% Similarity=0.223 Sum_probs=123.3
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC----CCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH----GRSAEIEGLDPPH 103 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~----G~S~~~~~~~~~~ 103 (325)
..+.|+..+++ .+++|+||++||++++...|..+.+.|. .++.+++++.+.. ........ ....
T Consensus 9 ~~~~~~~~~~~--~~~~p~vv~lHG~g~~~~~~~~l~~~l~---------~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~ 76 (209)
T d3b5ea1 9 LAFPYRLLGAG--KESRECLFLLHGSGVDETTLVPLARRIA---------PTATLVAARGRIPQEDGFRWFERID-PTRF 76 (209)
T ss_dssp SSSCEEEESTT--SSCCCEEEEECCTTBCTTTTHHHHHHHC---------TTSEEEEECCSEEETTEEESSCEEE-TTEE
T ss_pred CcceeEecCCC--CCCCCEEEEEcCCCCCHHHHHHHHHHhc---------cCcEEEeeccCcCcccCccccccCC-cccc
Confidence 34556666543 3468999999999999999999988887 6789998865421 11111100 0122
Q ss_pred CHHHH---HHHH----HHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCc
Q 020518 104 DIANA---ANDL----ANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENS 174 (325)
Q Consensus 104 ~~~~~---~~~l----~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~ 174 (325)
+.++. ++++ ..+.++.+ .+ +++++|||+||.+++.++.++|+ ++.+++++++.+.....
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~~~~~id~~-ri~l~G~S~Gg~~a~~~a~~~p~--------~~~~~v~~~g~~~~~~~--- 144 (209)
T d3b5ea1 77 EQKSILAETAAFAAFTNEAAKRHGLNLD-HATFLGYSNGANLVSSLMLLHPG--------IVRLAALLRPMPVLDHV--- 144 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEEEETHHHHHHHHHHHHSTT--------SCSEEEEESCCCCCSSC---
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCcccC-CEEEEeeCChHHHHHHHHHhCCC--------cceEEEEeCCccccccc---
Confidence 33332 3333 33444444 34 79999999999999999999999 99999999875321000
Q ss_pred hhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCC
Q 020518 175 EGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHP 254 (325)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (325)
....
T Consensus 145 ---------------------------------------------------------------------------~~~~- 148 (209)
T d3b5ea1 145 ---------------------------------------------------------------------------PATD- 148 (209)
T ss_dssp ---------------------------------------------------------------------------CCCC-
T ss_pred ---------------------------------------------------------------------------cccc-
Confidence 0001
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 255 PQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..++|+++++|++|+++++. .+.+.+.+...+. +++++++++ ||.+. ++ ..+.+.+||.
T Consensus 149 ~~~~p~~~~~G~~D~~~~~~-~~~~~~~l~~~G~----~v~~~~~~g-gH~i~---~~-~~~~~~~wl~ 207 (209)
T d3b5ea1 149 LAGIRTLIIAGAADETYGPF-VPALVTLLSRHGA----EVDARIIPS-GHDIG---DP-DAAIVRQWLA 207 (209)
T ss_dssp CTTCEEEEEEETTCTTTGGG-HHHHHHHHHHTTC----EEEEEEESC-CSCCC---HH-HHHHHHHHHH
T ss_pred cccchheeeeccCCCccCHH-HHHHHHHHHHCCC----CeEEEEECC-CCCCC---HH-HHHHHHHHhC
Confidence 12379999999999998754 4556666555443 389999997 89774 33 4456789985
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.80 E-value=3.6e-17 Score=126.48 Aligned_cols=192 Identities=14% Similarity=0.092 Sum_probs=129.4
Q ss_pred ceEEEEcccCCCCCCCceEEEecCC---CCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGL---LGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~---~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+|......+ ..+.++++|++||. +++..+ ...+++.|.+ .||.++.+|+||.|.|....+ ...
T Consensus 11 ~Le~~~~~~--~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~--------~G~~~lrfn~RG~g~S~G~~~--~~~ 78 (218)
T d2i3da1 11 RLEGRYQPS--KEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQK--------RGFTTLRFNFRSIGRSQGEFD--HGA 78 (218)
T ss_dssp EEEEEEECC--SSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHH--------TTCEEEEECCTTSTTCCSCCC--SSH
T ss_pred cEEEEEeCC--CCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHh--------cCeeEEEEecCccCCCccccc--cch
Confidence 566544322 22356899999985 444333 2345666666 899999999999999988643 222
Q ss_pred CHHHHHHHHHHHHHHhC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 104 DIANAANDLANLVKAKG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
...+.+..+.+++.... ...+++++|+|+||.+++.++.+.+. +.+++++.+.......
T Consensus 79 ~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~---------~~~~~~~~~~~~~~~~----------- 138 (218)
T d2i3da1 79 GELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE---------IEGFMSIAPQPNTYDF----------- 138 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT---------EEEEEEESCCTTTSCC-----------
T ss_pred hHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc---------ccceeeccccccccch-----------
Confidence 22222222333333333 22389999999999999999988764 6777777655321100
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
..+... .+|.++
T Consensus 139 ------------------------------------------------------------------~~~~~~--~~p~l~ 150 (218)
T d2i3da1 139 ------------------------------------------------------------------SFLAPC--PSSGLI 150 (218)
T ss_dssp ------------------------------------------------------------------TTCTTC--CSCEEE
T ss_pred ------------------------------------------------------------------hhcccc--CCCcee
Confidence 001111 269999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|++|.+++......+.+.+..... .+.++++++|++|++. .+.+++.+.+.+||++
T Consensus 151 i~g~~D~~~~~~~~~~l~~~~~~~~~---~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~ 208 (218)
T d2i3da1 151 INGDADKVAPEKDVNGLVEKLKTQKG---ILITHRTLPGANHFFN-GKVDELMGECEDYLDR 208 (218)
T ss_dssp EEETTCSSSCHHHHHHHHHHHTTSTT---CCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHH
T ss_pred eecccceecChHHHHHHHHHHhhccC---CCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHH
Confidence 99999999999887777666553221 2379999999999876 6779999999999974
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.80 E-value=4.8e-18 Score=130.24 Aligned_cols=178 Identities=16% Similarity=0.114 Sum_probs=124.7
Q ss_pred CCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC---CCCCCCHHHH---HHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG---LDPPHDIANA---ANDLAN 114 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~---~~~l~~ 114 (325)
++++|+||++||++++...|..+.+.+. +++.|++++.+..+....... .....+.++. ++++..
T Consensus 11 ~~~~P~vi~lHG~g~~~~~~~~~~~~l~---------~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGNELDLLPLAEIVD---------SEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNE 81 (202)
T ss_dssp CTTSCEEEEECCTTCCTTTTHHHHHHHH---------TTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHhc---------cCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHH
Confidence 3568999999999999999999998888 688999987654433211110 0012233332 233333
Q ss_pred H----HHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 115 L----VKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 115 ~----l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
+ .++.+ .+ ++.++|+|+||.+++.++.++|+ ++.+++++++.......
T Consensus 82 ~i~~~~~~~~~d~~-~i~~~G~S~Gg~~a~~la~~~~~--------~~~~~~~~~~~~~~~~~----------------- 135 (202)
T d2h1ia1 82 FLDEAAKEYKFDRN-NIVAIGYSNGANIAASLLFHYEN--------ALKGAVLHHPMVPRRGM----------------- 135 (202)
T ss_dssp HHHHHHHHTTCCTT-CEEEEEETHHHHHHHHHHHHCTT--------SCSEEEEESCCCSCSSC-----------------
T ss_pred HHHHHHHhcccccc-ceeeecccccchHHHHHHHhccc--------cccceeeecCCCCcccc-----------------
Confidence 3 33433 45 89999999999999999999999 99999988764311000
Q ss_pred CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCC
Q 020518 189 PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
.... ....|+++++|++|
T Consensus 136 ------------------------------------------------------------~~~~--~~~~~~~i~~G~~D 153 (202)
T d2h1ia1 136 ------------------------------------------------------------QLAN--LAGKSVFIAAGTND 153 (202)
T ss_dssp ------------------------------------------------------------CCCC--CTTCEEEEEEESSC
T ss_pred ------------------------------------------------------------cccc--cccchhhcccccCC
Confidence 0001 12268899999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++++++..+.+.+.+...+. +++++.+++ ||.+ +.+..+.+.+||++
T Consensus 154 ~~vp~~~~~~~~~~l~~~g~----~~~~~~~~g-gH~~----~~~~~~~~~~wl~k 200 (202)
T d2h1ia1 154 PICSSAESEELKVLLENANA----NVTMHWENR-GHQL----TMGEVEKAKEWYDK 200 (202)
T ss_dssp SSSCHHHHHHHHHHHHTTTC----EEEEEEESS-TTSC----CHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCC----CEEEEEECC-CCcC----CHHHHHHHHHHHHH
Confidence 99999999989888887553 389999996 8965 34456678888864
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.79 E-value=1.4e-19 Score=148.40 Aligned_cols=102 Identities=18% Similarity=0.250 Sum_probs=91.7
Q ss_pred CCceEEEecCCCCCCC------ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGR------NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
.+.||||+||++++.. .|..+.+.|.+ .||+|+++|+||+|.|+.+ ....+++++++..++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~--------~G~~V~~~~~~g~g~s~~~-----~~~~~~l~~~i~~~~ 73 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQS--------HGAKVYVANLSGFQSDDGP-----NGRGEQLLAYVKQVL 73 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHH--------TTCCEEECCCBCSSCTTST-----TSHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHH--------CCCEEEEecCCCCCCCCCC-----cccHHHHHHHHHHHH
Confidence 4778999999988764 47889999998 8999999999999998764 457889999999999
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.++.+ ++++|||||||.++..++.++|+ +|.++|+++++.
T Consensus 74 ~~~~~~-~v~lvGhS~GG~~~~~~~~~~p~--------~v~~vv~i~~p~ 114 (319)
T d1cvla_ 74 AATGAT-KVNLIGHSQGGLTSRYVAAVAPQ--------LVASVTTIGTPH 114 (319)
T ss_dssp HHHCCS-CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESCCT
T ss_pred HHhCCC-CEEEEeccccHHHHHHHHHHCcc--------ccceEEEECCCC
Confidence 999999 99999999999999999999999 999999999753
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.79 E-value=3.5e-18 Score=136.02 Aligned_cols=168 Identities=14% Similarity=0.057 Sum_probs=120.7
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA----- 118 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~----- 118 (325)
-|.||++||++++...+..+++.|++ .||.|+++|.+|++.... ....++.+.+..+.+.
T Consensus 52 ~P~Vv~~HG~~g~~~~~~~~a~~lA~--------~Gy~V~~~d~~~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~ 116 (260)
T d1jfra_ 52 FGAVVISPGFTAYQSSIAWLGPRLAS--------QGFVVFTIDTNTTLDQPD-------SRGRQLLSALDYLTQRSSVRT 116 (260)
T ss_dssp EEEEEEECCTTCCGGGTTTHHHHHHT--------TTCEEEEECCSSTTCCHH-------HHHHHHHHHHHHHHHTSTTGG
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHh--------CCCEEEEEeeCCCcCCch-------hhHHHHHHHHHHHHhhhhhhc
Confidence 47899999999999999999999998 899999999998754321 1112222222222221
Q ss_pred -hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHH
Q 020518 119 -KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKW 197 (325)
Q Consensus 119 -~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (325)
++.+ ++.++|||+||..++.++...+ +++++|.+.+.....
T Consensus 117 ~vD~~-rI~v~G~S~GG~~al~aa~~~~---------~~~A~v~~~~~~~~~---------------------------- 158 (260)
T d1jfra_ 117 RVDAT-RLGVMGHSMGGGGSLEAAKSRT---------SLKAAIPLTGWNTDK---------------------------- 158 (260)
T ss_dssp GEEEE-EEEEEEETHHHHHHHHHHHHCT---------TCSEEEEESCCCSCC----------------------------
T ss_pred ccccc-ceEEEeccccchHHHHHHhhhc---------cchhheeeecccccc----------------------------
Confidence 2345 8999999999999999999887 588888777542110
Q ss_pred HHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHH-H
Q 020518 198 LVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV-I 276 (325)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~ 276 (325)
.... ..+|+|+|+|++|.+++++. .
T Consensus 159 ----------------------------------------------------~~~~--~~~P~l~i~G~~D~~vp~~~~~ 184 (260)
T d1jfra_ 159 ----------------------------------------------------TWPE--LRTPTLVVGADGDTVAPVATHS 184 (260)
T ss_dssp ----------------------------------------------------CCTT--CCSCEEEEEETTCSSSCTTTTH
T ss_pred ----------------------------------------------------cccc--cccceeEEecCCCCCCCHHHHH
Confidence 0011 23799999999999998854 4
Q ss_pred HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 277 QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+.+.+..+... ..++++++|++|+.....-..+.+.+.+||+
T Consensus 185 ~~~~~~~~~~~-----~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~ 226 (260)
T d1jfra_ 185 KPFYESLPGSL-----DKAYLELRGASHFTPNTSDTTIAKYSISWLK 226 (260)
T ss_dssp HHHHHHSCTTS-----CEEEEEETTCCTTGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcccCC-----CEEEEEECCCccCCCCCChHHHHHHHHHHHH
Confidence 44444443322 2789999999999877766778888888886
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.78 E-value=1.3e-17 Score=127.97 Aligned_cols=177 Identities=16% Similarity=0.141 Sum_probs=126.1
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC---CCCCCCH---HHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG---LDPPHDI---ANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~---~~~~~~~---~~~~~~l~~~ 115 (325)
++.|+||++||++++...|..+.+.|. .++.|++++.+..+.+..... .....+. ...++.+..+
T Consensus 15 ~~~P~vi~lHG~G~~~~~~~~~~~~l~---------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDENQFFDFGARLL---------PQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADF 85 (203)
T ss_dssp TTSCEEEEECCTTCCHHHHHHHHHHHS---------TTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhc---------cCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHH
Confidence 458999999999999998988888887 678999987775543322110 0012223 3334444444
Q ss_pred HH----HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 020518 116 VK----AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191 (325)
Q Consensus 116 l~----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (325)
++ ..+.+ +++++|||+||.+++.++.++|+ .+.+++++++.......
T Consensus 86 l~~~~~~~~~~-~v~l~G~S~Gg~~a~~~a~~~p~--------~~~~~~~~~~~~~~~~~-------------------- 136 (203)
T d2r8ba1 86 IKANREHYQAG-PVIGLGFSNGANILANVLIEQPE--------LFDAAVLMHPLIPFEPK-------------------- 136 (203)
T ss_dssp HHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHSTT--------TCSEEEEESCCCCSCCC--------------------
T ss_pred HHHhhhcCCCc-eEEEEEecCHHHHHHHHHHhhhh--------cccceeeeccccccccc--------------------
Confidence 43 45677 99999999999999999999999 89999998875321100
Q ss_pred CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
........|+++++|++|+++
T Consensus 137 -----------------------------------------------------------~~~~~~~~~~~i~hG~~D~~v 157 (203)
T d2r8ba1 137 -----------------------------------------------------------ISPAKPTRRVLITAGERDPIC 157 (203)
T ss_dssp -----------------------------------------------------------CCCCCTTCEEEEEEETTCTTS
T ss_pred -----------------------------------------------------------cccccccchhhccccCCCCcc
Confidence 000011258899999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|++..+.+.+.+...+. +++++++++ ||.+. ++ ..+.+.+||..
T Consensus 158 p~~~~~~~~~~L~~~g~----~v~~~~~~g-gH~~~---~~-~~~~~~~wl~~ 201 (203)
T d2r8ba1 158 PVQLTKALEESLKAQGG----TVETVWHPG-GHEIR---SG-EIDAVRGFLAA 201 (203)
T ss_dssp CHHHHHHHHHHHHHHSS----EEEEEEESS-CSSCC---HH-HHHHHHHHHGG
T ss_pred cHHHHHHHHHHHHHCCC----CEEEEEECC-CCcCC---HH-HHHHHHHHHHh
Confidence 99999888888776543 389999987 89854 33 45668899864
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.78 E-value=2.1e-17 Score=131.66 Aligned_cols=227 Identities=10% Similarity=-0.001 Sum_probs=134.0
Q ss_pred ccccceEEEEcccCCCCCCC--ceEEEecCCCC-----CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYT--STAFVLHGLLG-----SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE 97 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~--~~vv~~HG~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 97 (325)
.+|.++.|.-+-|+.-++++ |.||++||.++ ....+......++. +||.|+.+|+||.+.+....
T Consensus 11 ~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~--------~g~~V~~~d~rg~~~~~~~~ 82 (258)
T d2bgra2 11 LNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST--------ENIIVASFDGRGSGYQGDKI 82 (258)
T ss_dssp ETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT--------TCCEEEEECCTTCSSSCHHH
T ss_pred eCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhc--------CCcEEEeecccccCCcchHH
Confidence 47889999998776433333 78999999422 12222233344554 89999999999987543210
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 98 --GLDPPHDIANAANDLANLVKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 98 --~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
........ ...+++.++++.+. .+ ++.++|+|+||.+++.++..+|+ .+...+...+.....
T Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~id~~-~i~i~G~S~GG~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 152 (258)
T d2bgra2 83 MHAINRRLGT-FEVEDQIEAARQFSKMGFVDNK-RIAIWGWSYGGYVTSMVLGSGSG--------VFKCGIAVAPVSRWE 152 (258)
T ss_dssp HGGGTTCTTS-HHHHHHHHHHHHHTTSSSEEEE-EEEEEEETHHHHHHHHHHTTTCS--------CCSEEEEESCCCCGG
T ss_pred HHhhhhhhhh-HHHHHHHHHHHHhhhhcccccc-cccccCcchhhcccccccccCCC--------cceEEEEeecccccc
Confidence 00011111 12333344444332 23 69999999999999999999998 776666555432211
Q ss_pred CCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
.. . ........... ..... .... ... ....
T Consensus 153 ~~---~---~~~~~~~~~~~-----------------~~~~~--------------------~~~~----~~~---~~~~ 182 (258)
T d2bgra2 153 YY---D---SVYTERYMGLP-----------------TPEDN--------------------LDHY----RNS---TVMS 182 (258)
T ss_dssp GS---B---HHHHHHHHCCC-----------------STTTT--------------------HHHH----HHS---CSGG
T ss_pred cc---c---ccccchhcccc-----------------cchhh--------------------HHHh----hcc---cccc
Confidence 00 0 00000000000 00000 0000 000 0011
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
....+. ++|+++++|++|+.+++.....+.+.+...+. +++++++|+++|.+. .+..+.+.+.+.+||++
T Consensus 183 ~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~----~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~ 253 (258)
T d2bgra2 183 RAENFK-QVEYLLIHGTADDNVHFQQSAQISKALVDVGV----DFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQ 253 (258)
T ss_dssp GGGGGG-GSEEEEEEETTCSSSCTHHHHHHHHHHHHHTC----CCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHH
T ss_pred cccccc-cCChheeeecCCCcccHHHHHHHHHHHHHCCC----CEEEEEECCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 112221 26999999999999999888888777766543 389999999999753 35577889999999974
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=2.2e-17 Score=131.85 Aligned_cols=227 Identities=13% Similarity=0.165 Sum_probs=130.6
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCC-----CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLG-----SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.++.|.+... +++|+||++||.+. +...|..+...+...+.+ .||.|+++|+|..+... ..
T Consensus 19 ~~~~~~~~~~----~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~----~g~~v~~~dYrl~p~~~------~~ 84 (263)
T d1vkha_ 19 KTLTFQEISQ----NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTE----STVCQYSIEYRLSPEIT------NP 84 (263)
T ss_dssp GCEEEECCCT----TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTT----CCEEEEEECCCCTTTSC------TT
T ss_pred ceEEeccCCC----CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHh----CCeEEEEeccccCcchh------hh
Confidence 4455655443 35899999999542 345566666666654432 89999999999765432 23
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCC---------ccCCcceEEEEecCCCCCCCCC
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQ---------FVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~---------~~~~v~~lvli~~~~~~~~~~~ 173 (325)
..+++..+.+..+++..+.+ +++|+|||+||.+++.++...++..... ....+...+..++.
T Consensus 85 ~~~~d~~~~~~~l~~~~~~~-~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 155 (263)
T d1vkha_ 85 RNLYDAVSNITRLVKEKGLT-NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGI-------- 155 (263)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCC--------
T ss_pred HHHHhhhhhhhccccccccc-ceeeeccCcHHHHHHHHHHhccCcccccccccccccccccccccccccccc--------
Confidence 45777777788888888888 9999999999999999998877611000 00011111111111
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
......... . .....++...+... ...+............ ..+..
T Consensus 156 -------------------~~~~~~~~~---~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~ 200 (263)
T d1vkha_ 156 -------------------YSLKELLIE---Y---PEYDCFTRLAFPDG--IQMYEEEPSRVMPYVK--------KALSR 200 (263)
T ss_dssp -------------------CCHHHHHHH---C---GGGHHHHHHHCTTC--GGGCCCCHHHHHHHHH--------HHHHH
T ss_pred -------------------ccchhhhhh---c---cccchhhhcccccc--cccccccccccCcccc--------ccccc
Confidence 000000000 0 00001111111000 0000000000000000 01111
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHH
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
. .+|+++++|++|..++++....+.+.++..+. +++++++++++|...+++ +++.+.|.
T Consensus 201 ~--~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~----~~~~~~~~~~~H~~~~~~-~~~~~~i~ 259 (263)
T d1vkha_ 201 F--SIDMHLVHSYSDELLTLRQTNCLISCLQDYQL----SFKLYLDDLGLHNDVYKN-GKVAKYIF 259 (263)
T ss_dssp H--TCEEEEEEETTCSSCCTHHHHHHHHHHHHTTC----CEEEEEECCCSGGGGGGC-HHHHHHHH
T ss_pred c--CCCeeeeecCCCcccCHHHHHHHHHHHHHCCC----CEEEEEECCCCchhhhcC-hHHHHHHH
Confidence 1 27999999999999999998889888877554 389999999999877776 44555554
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.75 E-value=1.5e-18 Score=140.00 Aligned_cols=105 Identities=11% Similarity=0.034 Sum_probs=87.1
Q ss_pred CCCceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 42 PYTSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
..+.||||+||++++... |..+.+.|.+ .||+|+.+|+||+|.++. ..+.+++++.+..+++..
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~--------~Gy~v~~~d~~g~g~~d~------~~sae~la~~i~~v~~~~ 94 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQ--------LGYTPCWISPPPFMLNDT------QVNTEYMVNAITALYAGS 94 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHT--------TTCEEEEECCTTTTCSCH------HHHHHHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCCCCCcchhHHHHHHHHHh--------CCCeEEEecCCCCCCCch------HhHHHHHHHHHHHHHHhc
Confidence 456789999999987654 5678888887 899999999999998754 345677788888888888
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+ ++.||||||||.++..++.++|+ ...+|+++|.+++..
T Consensus 95 g~~-kV~lVGhS~GG~~a~~~l~~~p~-----~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 95 GNN-KLPVLTWSQGGLVAQWGLTFFPS-----IRSKVDRLMAFAPDY 135 (317)
T ss_dssp TSC-CEEEEEETHHHHHHHHHHHHCGG-----GTTTEEEEEEESCCT
T ss_pred cCC-ceEEEEeCchHHHHHHHHHHCCC-----cchheeEEEEeCCCC
Confidence 888 99999999999999999999986 122799999999763
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.74 E-value=1.5e-16 Score=124.47 Aligned_cols=197 Identities=12% Similarity=0.026 Sum_probs=130.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD---- 100 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~---- 100 (325)
.+|..+.-....+.. .+.|.||++|+..+.......++..|++ .||.|+++|+.|.+.........
T Consensus 11 ~dg~~~~a~~~~P~~--~~~P~vl~~h~~~G~~~~~~~~a~~lA~--------~Gy~vl~pd~~~~~~~~~~~~~~~~~~ 80 (233)
T d1dina_ 11 YDGHTFGALVGSPAK--APAPVIVIAQEIFGVNAFMRETVSWLVD--------QGYAAVCPDLYARQAPGTALDPQDERQ 80 (233)
T ss_dssp TTSCEECEEEECCSS--SSEEEEEEECCTTBSCHHHHHHHHHHHH--------TTCEEEEECGGGGTSTTCBCCTTSHHH
T ss_pred CCCCEEEEEEECCCC--CCceEEEEeCCCCCCCHHHHHHHHHHHh--------cCCcceeeeeccCCCcCcccChHHHHH
Confidence 467777766655532 4579999999777655556677888887 89999999998766554322100
Q ss_pred --------CCCCHHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 101 --------PPHDIANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 101 --------~~~~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
...+.+....|+...++.+. ...++.++|+|+||.+++.++.+. .+.+.+.+-+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~----------~~~~~~~~~~~~~~ 150 (233)
T d1dina_ 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG----------YVDRAVGYYGVGLE 150 (233)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT----------CSSEEEEESCSCGG
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc----------ccceeccccccccc
Confidence 12345556667777666551 122799999999999999988653 34554443221100
Q ss_pred CCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccc
Q 020518 169 VKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYW 248 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (325)
...
T Consensus 151 -----------------------------------------------------------------------------~~~ 153 (233)
T d1dina_ 151 -----------------------------------------------------------------------------KQL 153 (233)
T ss_dssp -----------------------------------------------------------------------------GGG
T ss_pred -----------------------------------------------------------------------------cch
Confidence 000
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh--------HHHHHHHHH
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP--------KGLLEIVAP 320 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~ 320 (325)
....+++ +|+++++|++|+.++++..+.+.+...... +++++++||++|.+..+.. ++-.+.+.+
T Consensus 154 ~~~~~i~--~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~-----~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ 226 (233)
T d1dina_ 154 NKVPEVK--HPALFHMGGQDHFVPAPSRQLITEGFGANP-----LLQVHWYEEAGHSFARTSSSGYVASAAALANERTLD 226 (233)
T ss_dssp GGGGGCC--SCEEEEEETTCTTSCHHHHHHHHHHHTTCT-----TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHH
T ss_pred hhhhccC--CcceeeecccccCCCHHHHHHHHHHHhcCC-----CEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHH
Confidence 0112233 799999999999999988888877665422 3899999999997654322 233466778
Q ss_pred HHhcC
Q 020518 321 RIASV 325 (325)
Q Consensus 321 fl~~~ 325 (325)
||.++
T Consensus 227 ffa~~ 231 (233)
T d1dina_ 227 FLAPL 231 (233)
T ss_dssp HHGGG
T ss_pred HHHcC
Confidence 88754
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.74 E-value=2.8e-18 Score=137.75 Aligned_cols=99 Identities=17% Similarity=0.197 Sum_probs=87.9
Q ss_pred CCceEEEecCCCCCCC-----ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGR-----NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
++.||||+||++++.. .|..+.+.|.+ .||+|+++|++|+|.+ ....++++++|.++++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~--------~G~~v~~~~~~~~~~~--------~~~a~~l~~~i~~~~~ 69 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRR--------DGAQVYVTEVSQLDTS--------EVRGEQLLQQVEEIVA 69 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHH--------TTCCEEEECCCSSSCH--------HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHh--------CCCEEEEeCCCCCCCc--------HHHHHHHHHHHHHHHH
Confidence 4778999999988654 47889999998 8999999999999854 3456788999999999
Q ss_pred HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 118 AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 118 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
..+.+ ++++|||||||.++..++.++|+ +|+++|.++++.
T Consensus 70 ~~g~~-~v~ligHS~GG~~~r~~~~~~p~--------~v~~lv~i~tPh 109 (285)
T d1ex9a_ 70 LSGQP-KVNLIGHSHGGPTIRYVAAVRPD--------LIASATSVGAPH 109 (285)
T ss_dssp HHCCS-CEEEEEETTHHHHHHHHHHHCGG--------GEEEEEEESCCT
T ss_pred HcCCC-eEEEEEECccHHHHHHHHHHCCc--------cceeEEEECCCC
Confidence 99999 99999999999999999999999 999999999764
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.72 E-value=1.2e-15 Score=118.03 Aligned_cols=183 Identities=17% Similarity=0.152 Sum_probs=119.7
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC--------C-CCC---CCCCCCCCCC---HH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH--------G-RSA---EIEGLDPPHD---IA 106 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~--------G-~S~---~~~~~~~~~~---~~ 106 (325)
+.+++|||+||++++...|..+.+.|.+.+ .++.+++++-|.. . .+- .......... ++
T Consensus 12 ~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~------~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 85 (218)
T d1auoa_ 12 PADACVIWLHGLGADRYDFMPVAEALQESL------LTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE 85 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHTTC------TTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred CCCeEEEEEcCCCCChhhHHHHHHHHHHhC------CCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHH
Confidence 356789999999999999999999988655 5778887765421 0 000 0000001122 22
Q ss_pred HHHHHHHHHHH---HhC--CCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 107 NAANDLANLVK---AKG--WDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 107 ~~~~~l~~~l~---~~~--~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
...+.+.++++ +.+ .+ +++++|+|+||.+++.++..+ +. .+.+++.+++..........
T Consensus 86 ~~~~~v~~li~~~~~~~i~~~-ri~l~GfSqGg~~a~~~~l~~~~~--------~~~~~v~~~g~~~~~~~~~~------ 150 (218)
T d1auoa_ 86 VSAKMVTDLIEAQKRTGIDAS-RIFLAGFSQGGAVVFHTAFINWQG--------PLGGVIALSTYAPTFGDELE------ 150 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG-GEEEEEETHHHHHHHHHHHTTCCS--------CCCEEEEESCCCTTCCTTCC------
T ss_pred HHHHHHHHHHHHHHHhCCCCc-ceEEeeeCcchHHHHHHHHhcccc--------cceeeeeccccCcccccccc------
Confidence 33333444443 223 35 899999999999999988654 45 78888888864321100000
Q ss_pred HHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 181 VLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
.... ..++|+
T Consensus 151 ------------------------------------------------------------------~~~~----~~~~pv 160 (218)
T d1auoa_ 151 ------------------------------------------------------------------LSAS----QQRIPA 160 (218)
T ss_dssp ------------------------------------------------------------------CCHH----HHTCCE
T ss_pred ------------------------------------------------------------------cchh----ccCCCE
Confidence 0000 012699
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++++|++|.+++.+..+...+.+...+. +++++.++ +||.+. ++..+.|.+||.+
T Consensus 161 l~~hG~~D~vvp~~~~~~~~~~L~~~g~----~~~~~~~~-~gH~i~----~~~~~~i~~wl~~ 215 (218)
T d1auoa_ 161 LCLHGQYDDVVQNAMGRSAFEHLKSRGV----TVTWQEYP-MGHEVL----PQEIHDIGAWLAA 215 (218)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHHTTTC----CEEEEEES-CSSSCC----HHHHHHHHHHHHH
T ss_pred EEEecCCCCccCHHHHHHHHHHHHHCCC----CEEEEEEC-CCCccC----HHHHHHHHHHHHH
Confidence 9999999999999999999988887654 38999997 599664 3445678888854
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=5e-16 Score=123.51 Aligned_cols=229 Identities=11% Similarity=0.079 Sum_probs=128.5
Q ss_pred cccceEEEEcccCCCCCC--CceEEEecCCCCC---CCChH--HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC-
Q 020518 26 SLQTLAYEEVRSSSDRPY--TSTAFVLHGLLGS---GRNWR--SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE- 97 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~--~~~vv~~HG~~~~---~~~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~- 97 (325)
+|..|....+.|..-+++ -|.||++||.+++ ...|. .....|++ .||.|+++|.||.+.+....
T Consensus 11 dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~--------~G~~vv~~d~rGs~~~g~~~~ 82 (258)
T d1xfda2 11 DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS--------HGAVVVKCDGRGSGFQGTKLL 82 (258)
T ss_dssp TTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHT--------TCCEEECCCCTTCSSSHHHHH
T ss_pred CCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhc--------CCcEEEEeccccccccchhHh
Confidence 677888777766542222 3789999996332 22332 23445666 89999999999855331100
Q ss_pred -CCCCCC---CHHHHHHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC
Q 020518 98 -GLDPPH---DIANAANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT 171 (325)
Q Consensus 98 -~~~~~~---~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~ 171 (325)
.....+ ..++..+.+..++++.. .+ ++.++|||+||.+++.++...++... ..+...+.+.+.......
T Consensus 83 ~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~-ri~v~G~S~GG~~a~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 157 (258)
T d1xfda2 83 HEVRRRLGLLEEKDQMEAVRTMLKEQYIDRT-RVAVFGKDYGGYLSTYILPAKGENQG----QTFTCGSALSPITDFKLY 157 (258)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHSSSSEEEE-EEEEEEETHHHHHHHHCCCCSSSTTC----CCCSEEEEESCCCCTTSS
T ss_pred hhhhccchhHHHHHHHHhhhhhccccccccc-ceeccccCchHHHHHHHHhcCCcccc----eeeeeeeccccceeeecc
Confidence 000111 23333333333333323 34 79999999999999998877765111 145555555543221110
Q ss_pred CCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 172 ENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
.. ..... +... ..... .. +........+
T Consensus 158 --~~---~~~~~------------------------------~~~~--~~~~~-~~--------------~~~~s~~~~~ 185 (258)
T d1xfda2 158 --AS---AFSER------------------------------YLGL--HGLDN-RA--------------YEMTKVAHRV 185 (258)
T ss_dssp --BH---HHHHH------------------------------HHCC--CSSCC-SS--------------TTTTCTHHHH
T ss_pred --cc---ccccc------------------------------cccc--cccch-HH--------------hhccchhhhh
Confidence 00 00000 0000 00000 00 0000011111
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
..+ .+.|+|+++|+.|+.++++....+.+.+...+. +++++++|+++|.+.. +....+.+.+.+||+.
T Consensus 186 ~~~-~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~----~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~ 254 (258)
T d1xfda2 186 SAL-EEQQFLIIHPTADEKIHFQHTAELITQLIRGKA----NYSLQIYPDESHYFTSSSLKQHLYRSIINFFVE 254 (258)
T ss_dssp TSC-CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTC----CCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTT
T ss_pred hhh-hcccccccccCCCCCcCHHHHHHHHHHHHHCCC----CEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 222 136999999999999999888888777666443 3899999999997643 3556678899999975
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.59 E-value=1.4e-13 Score=114.16 Aligned_cols=129 Identities=16% Similarity=0.125 Sum_probs=83.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCC---CC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS---GR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
.+|..|..+.+.+.......|.||++||.+.. .. .+..++..+++ .|+.|+++|+|..+...+...
T Consensus 87 ~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~--------~g~~VvsvdYRla~~~~pe~~- 157 (358)
T d1jkma_ 87 VDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA--------AGSVVVMVDFRNAWTAEGHHP- 157 (358)
T ss_dssp TTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHH--------TTCEEEEEECCCSEETTEECC-
T ss_pred CCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHh--------hhheeeeeeecccccccccCC-
Confidence 46778888777765544556889999998553 22 23456777776 899999999998644332111
Q ss_pred CCCCCHHHHHHHHHHHH---HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 100 DPPHDIANAANDLANLV---KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l---~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
....+++....+.-+. ..++.+ ++.|+|+|.||.+++.++....+.. ....+.+++++.+...
T Consensus 158 -~p~~l~D~~~a~~wl~~~~~~~~~~-ri~i~G~SAGG~La~~~a~~~~~~~---~~~~~~~~~~~~p~~~ 223 (358)
T d1jkma_ 158 -FPSGVEDCLAAVLWVDEHRESLGLS-GVVVQGESGGGNLAIATTLLAKRRG---RLDAIDGVYASIPYIS 223 (358)
T ss_dssp -TTHHHHHHHHHHHHHHHTHHHHTEE-EEEEEEETHHHHHHHHHHHHHHHTT---CGGGCSEEEEESCCCC
T ss_pred -CchhhHHHHHHHHHHHHhccccCCc-cceeecccCchHHHHHHHHHHhhcC---CCccccccccccceec
Confidence 2223444444333333 345777 9999999999999988876532200 0115778888776543
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.59 E-value=1.8e-15 Score=118.90 Aligned_cols=106 Identities=11% Similarity=0.136 Sum_probs=80.6
Q ss_pred ceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 45 STAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 45 ~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
.||||+||++++. ..|..+...+.+.. .|+.|+++++.....+....+ ....+.+.++.+.+.+++.
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~------pG~~V~~l~~g~~~~~~~~~~--~~~~~~~~~e~v~~~I~~~~~ 77 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKI------PGIHVLSLEIGKTLREDVENS--FFLNVNSQVTTVCQILAKDPK 77 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHS------TTCCEEECCCSSSHHHHHHHH--HHSCHHHHHHHHHHHHHSCGG
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHC------CCeEEEEEEcCCCcccccccc--hhhhHHHHHHHHHHHHHhccc
Confidence 4899999998764 45778888888755 699999999865443322111 1335778888888887653
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+ ++++|||||||.++..++.+++. ..|..+|.++++-
T Consensus 78 ~~~-~v~lVGhSqGGLiaR~~i~~~~~-------~~V~~lITLgsPH 116 (279)
T d1ei9a_ 78 LQQ-GYNAMGFSQGGQFLRAVAQRCPS-------PPMVNLISVGGQH 116 (279)
T ss_dssp GTT-CEEEEEETTHHHHHHHHHHHCCS-------SCEEEEEEESCCT
T ss_pred ccc-ceeEEEEccccHHHHHHHHHcCC-------CCcceEEEECCCC
Confidence 335 89999999999999999999986 3699999999863
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.58 E-value=1.4e-14 Score=114.56 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=71.2
Q ss_pred CCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 42 ~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
...|.|||+||.+ ++...|..++..|.+ +||.|+.+|+|..+. .++.+.++|+.+.++.
T Consensus 60 ~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~--------~G~~Vv~~~YRl~p~----------~~~p~~~~d~~~a~~~ 121 (261)
T d2pbla1 60 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALS--------KGWAVAMPSYELCPE----------VRISEITQQISQAVTA 121 (261)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHH--------TTEEEEEECCCCTTT----------SCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCccCChhHhhhHHHHHhc--------CCceeeccccccccc----------ccCchhHHHHHHHHHH
Confidence 3579999999964 344556677888887 899999999995432 3455555555555443
Q ss_pred h---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 119 K---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 119 ~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+ ..+ +++|+|||.||.++..++..... .......+++++.+++..
T Consensus 122 ~~~~~~~-rI~l~G~SaGG~la~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 169 (261)
T d2pbla1 122 AAKEIDG-PIVLAGHSAGGHLVARMLDPEVL--PEAVGARIRNVVPISPLS 169 (261)
T ss_dssp HHHHSCS-CEEEEEETHHHHHHHHTTCTTTS--CHHHHTTEEEEEEESCCC
T ss_pred HHhcccC-ceEEEEcchHHHHHHHHhcCccc--ccchhhchhhhhcccccc
Confidence 3 346 99999999999999877754321 000112578888887654
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.55 E-value=5.7e-13 Score=108.82 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=69.0
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
..+..+.+.+.+.+...|.||++||.+ ++...+..++..++.. .||.|+.+|+|.......+ ..
T Consensus 62 ~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~-------~G~~V~~vdYrl~pe~~~~------~~ 128 (317)
T d1lzla_ 62 PEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARE-------LGFAVANVEYRLAPETTFP------GP 128 (317)
T ss_dssp CCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHH-------HCCEEEEECCCCTTTSCTT------HH
T ss_pred ceEEEEEECCCCCCCCCcEEEEecCcccccccccccchHHHhHHhh-------cCCcccccccccccccccc------cc
Confidence 357766666654434567899999964 3455666777777652 5999999999976543322 12
Q ss_pred HHHHHHHH---HHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccc
Q 020518 105 IANAANDL---ANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 105 ~~~~~~~l---~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+++..+.+ ....+++++ + +++++|+|.||.+++.++.+.++
T Consensus 129 ~~d~~~~~~~~~~~~~~~g~D~~-rI~l~G~SaGg~la~~~~~~~~~ 174 (317)
T d1lzla_ 129 VNDCYAALLYIHAHAEELGIDPS-RIAVGGQSAGGGLAAGTVLKARD 174 (317)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEE-EEEEEEETHHHHHHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHhCCCHH-HEEEEEeccccHHHHHHHhhhhh
Confidence 33332222 222344443 5 79999999999999999887654
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.52 E-value=3.8e-13 Score=111.33 Aligned_cols=126 Identities=17% Similarity=0.029 Sum_probs=96.0
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCCC----ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 98 (325)
.++||.+|....+.+.. ...-|+||+.||++.... .+......|++ +||.|+++|.||+|.|.....
T Consensus 11 pmrDGv~L~~~vy~P~~-~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~--------~GY~vv~~d~RG~g~S~G~~~ 81 (347)
T d1ju3a2 11 PMRDGVRLAVDLYRPDA-DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVR--------DGYAVVIQDTRGLFASEGEFV 81 (347)
T ss_dssp ECTTSCEEEEEEEEECC-SSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHH--------TTCEEEEEECTTSTTCCSCCC
T ss_pred ECCCCCEEEEEEEEcCC-CCCEEEEEEEcCCCCccccCcCcccHHHHHHHH--------CCCEEEEEeeCCccccCCccc
Confidence 45799999999888853 234588999999875322 12223445666 899999999999999998654
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 99 LDPPHDIANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 99 ~~~~~~~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
........+.|+.+++.+... ++++.++|+|+||.+++.+|.+.|. .++.++...+...
T Consensus 82 --~~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~--------~l~aiv~~~~~~d 141 (347)
T d1ju3a2 82 --PHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG--------GLKAIAPSMASAD 141 (347)
T ss_dssp --TTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT--------TEEEBCEESCCSC
T ss_pred --cccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccc--------cceeeeeccccch
Confidence 445566667777787776643 2389999999999999999999888 8899988887654
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.50 E-value=5e-13 Score=108.77 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=75.6
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+..+.|.+. ++.|.||++||.+ ++...+..++..+.+. .|+.|+++|+|...... ....+
T Consensus 67 ~i~~~iy~P~---~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~-------~g~~Vv~v~Yrlap~~~------~p~~~ 130 (311)
T d1jjia_ 67 DIRVRVYQQK---PDSPVLVYYHGGGFVICSIESHDALCRRIARL-------SNSTVVSVDYRLAPEHK------FPAAV 130 (311)
T ss_dssp EEEEEEEESS---SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHH-------HTSEEEEEECCCTTTSC------TTHHH
T ss_pred cEEEEEEcCC---CCceEEEEEcCCCCccCChhhhhhhhhhhhhc-------CCcEEEEeccccccccc------cchhh
Confidence 5677777664 3468999999985 3455666777777653 59999999999543222 12233
Q ss_pred HHHHHHHHHH---HHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 106 ANAANDLANL---VKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 106 ~~~~~~l~~~---l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
++..+.+..+ .+++++ + ++.++|+|.||.+++.++....+.. ...+.+.+++.+...
T Consensus 131 ~d~~~a~~~~~~~~~~~~~d~~-ri~v~G~SaGG~la~~~~~~~~~~~----~~~~~~~~l~~p~~~ 192 (311)
T d1jjia_ 131 YDCYDATKWVAENAEELRIDPS-KIFVGGDSAGGNLAAAVSIMARDSG----EDFIKHQILIYPVVN 192 (311)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEE-EEEEEEETHHHHHHHHHHHHHHHTT----CCCEEEEEEESCCCC
T ss_pred hhhhhhhhHHHHhHHHhCcChh-HEEEEeeecCCcceeechhhhhhcc----ccccceeeeecceee
Confidence 3333333222 233343 5 7999999999999988876654311 125677778777644
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.47 E-value=2.3e-12 Score=104.75 Aligned_cols=239 Identities=16% Similarity=0.073 Sum_probs=126.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+|..+..+.|.+.+.+++.|.||++||.+ ++...+..++..++.. .++.|+.+|+|....... .
T Consensus 54 ~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~-------~~~~v~~v~Yrl~p~~~~------p 120 (308)
T d1u4na_ 54 PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKD-------GRAVVFSVDYRLAPEHKF------P 120 (308)
T ss_dssp TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH-------HTSEEEEECCCCTTTSCT------T
T ss_pred CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccchhhhhhhc-------cccccccccccccccccc------c
Confidence 46667777776654445678999999975 4556777888888764 356888999985433221 2
Q ss_pred CCHHHHHHHHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 103 HDIANAANDLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
...++..+.+..+.+. .+ .+ +++++|+|.||.+++.++....+... ..+....++.+.............
T Consensus 121 ~~~~D~~~~~~~l~~~~~~~~~d~~-ri~~~G~SaGG~la~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
T d1u4na_ 121 AAVEDAYDALQWIAERAADFHLDPA-RIAVGGDSAGGNLAAVTSILAKERGG----PALAFQLLIYPSTGYDPAHPPASI 195 (308)
T ss_dssp HHHHHHHHHHHHHHTTTGGGTEEEE-EEEEEEETHHHHHHHHHHHHHHHHTC----CCCCCEEEESCCCCCCTTSCCHHH
T ss_pred cccchhhhhhhHHHHhHHhcCCCcc-eEEEeeccccchhHHHHHHhhhhccC----CCcccccccccccccccccccchh
Confidence 2233333333333322 12 34 79999999999999998877654111 145666666655433221111100
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
... ............. ............. ..+............
T Consensus 196 -----~~~--~~~~~~~~~~~~~-------------~~~~~~~~~~~~~-------------~~~~s~~~~~d~~~~--- 239 (308)
T d1u4na_ 196 -----EEN--AEGYLLTGGMSLW-------------FLDQYLNSLEELT-------------HPWFSPVLYPDLSGL--- 239 (308)
T ss_dssp -----HHT--SSSSSSCHHHHHH-------------HHHHHCSSGGGGG-------------CTTTCGGGCSCCTTC---
T ss_pred -----hhc--cccccccchhhhh-------------hhhcccCcccccc-------------chhhhhhhchhhcCC---
Confidence 000 0000000000000 0000000000000 000000000111111
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-c----ChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-D----NPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e----~p~~~~~~i~~fl~~ 324 (325)
.|+++++|+.|..+ .....+.+.+...+. .+++++++|++|.... . ..++..+.+.+||++
T Consensus 240 Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~----~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~ 305 (308)
T d1u4na_ 240 PPAYIATAQYDPLR--DVGKLYAEALNKAGV----KVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRD 305 (308)
T ss_dssp CCEEEEEEEECTTH--HHHHHHHHHHHHTTC----CEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHH
T ss_pred CCeeEEecCcCCch--HHHHHHHHHHHHCCC----CEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHH
Confidence 38999999999654 345566776666554 3999999999996543 1 234677788888864
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.40 E-value=8.5e-12 Score=104.14 Aligned_cols=128 Identities=15% Similarity=0.009 Sum_probs=85.7
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCC-------CChH----HHHHHHHhhhhccCCCCceEEEEeCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-------RNWR----SFSRNLASTLSQTSASSEWRMVLVDLRNHG 91 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-------~~~~----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G 91 (325)
+++||.+|....+.+... ..-|+||+.|+++.+. ..+. .....|++ +||.|+.+|.||+|
T Consensus 30 ~~rDG~~L~~~v~~P~~~-~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~--------~Gy~vv~~d~RG~g 100 (381)
T d1mpxa2 30 PMRDGVKLHTVIVLPKGA-KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVE--------GGYIRVFQDVRGKY 100 (381)
T ss_dssp ECTTSCEEEEEEEEETTC-CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHH--------TTCEEEEEECTTST
T ss_pred ECCCCCEEEEEEEEeCCC-CCccEEEEEccCCCCCcccccccccccccchhHHHHHHh--------CCCEEEEEecCccC
Confidence 456899999888887542 3458888999875421 1111 23455666 99999999999999
Q ss_pred CCCCCCCCCC-------C--CCHHHHHHHHHHHHHHh-CC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEE
Q 020518 92 RSAEIEGLDP-------P--HDIANAANDLANLVKAK-GW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLW 160 (325)
Q Consensus 92 ~S~~~~~~~~-------~--~~~~~~~~~l~~~l~~~-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lv 160 (325)
.|........ . ..-.+...++.+++.+. .+ +.+|.++|+|+||.+++.+|...|. .++.+|
T Consensus 101 ~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~--------~l~a~v 172 (381)
T d1mpxa2 101 GSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHP--------ALKVAV 172 (381)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCT--------TEEEEE
T ss_pred CCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhcccc--------ccceee
Confidence 9987532100 0 11122222333434333 22 2289999999999999999999988 899999
Q ss_pred EEecCCC
Q 020518 161 VLDSVPG 167 (325)
Q Consensus 161 li~~~~~ 167 (325)
...+...
T Consensus 173 ~~~~~~d 179 (381)
T d1mpxa2 173 PESPMID 179 (381)
T ss_dssp EESCCCC
T ss_pred eeccccc
Confidence 8887643
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.39 E-value=5.7e-12 Score=99.44 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=74.3
Q ss_pred cccceEEEEcccCCC--CCCCceEEEecCCCCCCCChHH-------HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSD--RPYTSTAFVLHGLLGSGRNWRS-------FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 96 (325)
.+..+.|..+-+..- +..-|.|+++||.+++...|.. ....+... .+...+.+...+.+.....
T Consensus 32 ~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 104 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAE-------GKIKPLIIVTPNTNAAGPG 104 (255)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHT-------TSSCCCEEEEECCCCCCTT
T ss_pred CCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhh-------ccCCcceeeeccccccccc
Confidence 467788888766542 2334789999999987766531 22222221 1222222222222222221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 97 EGLDPPHDIANAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.........+.+++++...+++. +.+ ++.++|+|+||..++.++.++|+ ++++++.+++..
T Consensus 105 ~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~-~i~i~G~S~GG~~a~~~a~~~Pd--------~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 105 IADGYENFTKDLLNSLIPYIESNYSVYTDRE-HRAIAGLSMGGGQSFNIGLTNLD--------KFAYIGPISAAP 170 (255)
T ss_dssp CSCHHHHHHHHHHHTHHHHHHHHSCBCCSGG-GEEEEEETHHHHHHHHHHHTCTT--------TCSEEEEESCCT
T ss_pred ccccccchHHHHHHHHHHHHHHhhccccccc-eeEeeeccchhHHHHHHHHhCCC--------cccEEEEEccCc
Confidence 11001112344555666666553 234 69999999999999999999999 999999988764
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.37 E-value=2.4e-10 Score=95.97 Aligned_cols=84 Identities=10% Similarity=0.053 Sum_probs=65.1
Q ss_pred HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-------------------CC
Q 020518 63 FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW-------------------DW 123 (325)
Q Consensus 63 ~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------------------~~ 123 (325)
....+.+ +||.|+.+|.||.|.|.... ...+.+ .++|..++++-+.. ++
T Consensus 128 ~~~~~~~--------~GYavv~~D~RG~g~S~G~~---~~~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnG 195 (405)
T d1lnsa3 128 LNDYFLT--------RGFASIYVAGVGTRSSDGFQ---TSGDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANG 195 (405)
T ss_dssp HHHHHHT--------TTCEEEEECCTTSTTSCSCC---CTTSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEE
T ss_pred chHHHHh--------CCCEEEEECCCCCCCCCCcc---ccCChh-hhhhHHHHHHHHHhcccccccccccccccccccCC
Confidence 3455666 89999999999999999865 244444 36666666665531 12
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+|.++|+|+||.+++.+|...|. .++++|..++..
T Consensus 196 kVGm~G~SY~G~~q~~aA~~~pp--------~LkAivp~~~~~ 230 (405)
T d1lnsa3 196 KVAMTGKSYLGTMAYGAATTGVE--------GLELILAEAGIS 230 (405)
T ss_dssp EEEEEEETHHHHHHHHHHTTTCT--------TEEEEEEESCCS
T ss_pred eeEEEecCHHHHHHHHHHhcCCc--------cceEEEecCccc
Confidence 69999999999999999999988 899999887654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.27 E-value=8.8e-10 Score=87.57 Aligned_cols=242 Identities=14% Similarity=-0.018 Sum_probs=121.4
Q ss_pred cccccceEEEEcccCC--CCCCCceEEEecCCCCCCCC--h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSGRN--W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~~~--~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 98 (325)
..||.+|....+.+.. .+..-|.||++||.++.... + ......+.. .++-+...+.++.........
T Consensus 14 s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T d1qfma2 14 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRH--------MGGVLAVANIRGGGEYGETWH 85 (280)
T ss_dssp CTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHH--------HCCEEEEECCTTSSTTHHHHH
T ss_pred CCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcc--------cceeeeccccccccccchhhh
Confidence 3578999888877754 23446899999997554322 2 223333333 456666666655443211100
Q ss_pred -CCCCCCHHHHHHHHHHHH----HHhC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 99 -LDPPHDIANAANDLANLV----KAKG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 99 -~~~~~~~~~~~~~l~~~l----~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
...........++..... .... ......++|+|.||..+...+...++ .+..++...+........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 157 (280)
T d1qfma2 86 KGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPD--------LFGCVIAQVGVMDMLKFH 157 (280)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG--------GCSEEEEESCCCCTTTGG
T ss_pred hcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccc--------hhhheeeeccccchhhhc
Confidence 001112222222222222 2221 22268899999999999999999998 777777666553221100
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
....... ........ ...... ........+.. ...+.
T Consensus 158 ~~~~~~~------------------~~~~~~~~-~~~~~~---------------------~~~~~~~~~~~---~s~~~ 194 (280)
T d1qfma2 158 KYTIGHA------------------WTTDYGCS-DSKQHF---------------------EWLIKYSPLHN---VKLPE 194 (280)
T ss_dssp GSTTGGG------------------GHHHHCCT-TSHHHH---------------------HHHHHHCGGGC---CCCCS
T ss_pred ccccccc------------------ceecccCC-Cccccc---------------------ccccccccccc---cchhh
Confidence 0000000 00000000 000000 00000000111 11111
Q ss_pred CCCC-CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCC---CCCceeEEEecCCCccccccChH--HHHHHHHHHHhc
Q 020518 253 HPPQ-GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG---SEGKVSVHVLPNAGHWVHVDNPK--GLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~e~p~--~~~~~i~~fl~~ 324 (325)
..+. .-|+|+++|++|+.++......+.+.+...+.. ....+++++++++||.+.-...+ +....+.+||++
T Consensus 195 ~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k 272 (280)
T d1qfma2 195 ADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIAR 272 (280)
T ss_dssp STTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHH
T ss_pred hcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 1111 137999999999999998888887777533111 11248999999999975432111 223345677753
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.21 E-value=1.1e-11 Score=99.38 Aligned_cols=109 Identities=20% Similarity=0.334 Sum_probs=70.7
Q ss_pred CCCCceEEEecCCCCCCCC-h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--
Q 020518 41 RPYTSTAFVLHGLLGSGRN-W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV-- 116 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l-- 116 (325)
++++|++|++|||.++... | ..+...+... .+++||++|+.... +..-.. .........+.+..+|
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~-------~d~NVI~VDW~~~a-~~~Y~~--a~~n~~~Vg~~ia~~i~~ 136 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKV-------EEVNCICVDWKKGS-QTSYTQ--AANNVRVVGAQVAQMLSM 136 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTT-------CCEEEEEEECHHHH-SSCHHH--HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhc-------CCceEEEEeecccc-CcchHH--HHHHHHHHHHHHHHHHHH
Confidence 4678999999999876643 3 3345454432 67999999996532 211000 1112333444444444
Q ss_pred --HHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 117 --KAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 117 --~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
++.+ .+ +++|||||+||.+|-.++ ++.. ++.+++.+||+.+..
T Consensus 137 l~~~~g~~~~-~vhlIGhSLGAhvAG~aG-~~~~--------~l~rItgLDPA~P~F 183 (337)
T d1rp1a2 137 LSANYSYSPS-QVQLIGHSLGAHVAGEAG-SRTP--------GLGRITGLDPVEASF 183 (337)
T ss_dssp HHHHHCCCGG-GEEEEEETHHHHHHHHHH-HTST--------TCCEEEEESCCCTTT
T ss_pred HHHhcCCChh-heEEEeecHHHhhhHHHH-Hhhc--------cccceeccCCCcccc
Confidence 3444 46 899999999999997555 5555 799999999985443
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=9.3e-10 Score=87.00 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=80.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCC--CCChHH---HHHHHHhhhhccCCCCceEEEEeCCCC-CCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS--GRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRN-HGRSAEIEGL 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G-~G~S~~~~~~ 99 (325)
.++.+........ .|+|+|+||.++. ...|.. +.+...+ .++-|+.+|--. .-.+..+..
T Consensus 14 ~~r~~~~~v~~~~-----~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~--------~~~iVV~p~g~~~~~y~~~~~~- 79 (267)
T d1r88a_ 14 MGRDIPVAFLAGG-----PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAG--------KGISVVAPAGGAYSMYTNWEQD- 79 (267)
T ss_dssp TTEEEEEEEECCS-----SSEEEEECCSSCCSSSCHHHHTSCHHHHHTT--------SSSEEEEECCCTTSTTSBCSSC-
T ss_pred CCceeeEEEECCC-----CCEEEEcCCCCCCCCcchhhhccHHHHHHhh--------CCeEEEEECCCCCcCCcccccc-
Confidence 3556666665543 5899999998663 345755 3343443 788999998422 111222211
Q ss_pred CCCCCHH-HHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 100 DPPHDIA-NAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 100 ~~~~~~~-~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
....++ -+.++|..+|++. ..+ ++.+.|+||||..|+.+|.++|+ ++++++.+++...
T Consensus 80 -~~~~~~tfl~~eL~~~i~~~~~~d~~-r~~i~G~SmGG~~Al~la~~~Pd--------~F~av~~~SG~~~ 141 (267)
T d1r88a_ 80 -GSKQWDTFLSAELPDWLAANRGLAPG-GHAAVGAAQGGYGAMALAAFHPD--------RFGFAGSMSGFLY 141 (267)
T ss_dssp -TTCBHHHHHHTHHHHHHHHHSCCCSS-CEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCCC
T ss_pred -ccccHHHHHHHHHHHHHHHhcCCCCC-ceEEEEEcchHHHHHHHHHhCcc--------cccEEEEeCCccC
Confidence 334454 4556788888754 345 79999999999999999999999 9999999997643
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.18 E-value=2.6e-11 Score=97.01 Aligned_cols=110 Identities=21% Similarity=0.328 Sum_probs=75.6
Q ss_pred CCCCceEEEecCCCCCCCC-h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSGRN-W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++|++|++|||.++... | ..+...+.+. .+++||++|+...... .... .........+.+..+|+.
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~-------~d~NVi~VDW~~~a~~-~Y~~--a~~n~~~Vg~~ia~~i~~ 136 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQV-------EKVNCICVDWRRGSRT-EYTQ--ASYNTRVVGAEIAFLVQV 136 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTT-------CCEEEEEEECHHHHSS-CHHH--HHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhc-------CCceEEEEechhhccc-chHH--HHHhHHHHHHHHHHHHHH
Confidence 4678999999999776543 3 3445555442 6799999999653221 1000 112344445555555543
Q ss_pred ----hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 119 ----KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 119 ----~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+ .+ +++|||||+||.+|-.++.+.+. +|.+++.+||+.+..
T Consensus 137 l~~~~g~~~~-~vhlIGhSLGAhiaG~ag~~l~~--------kigrItgLDPA~P~F 184 (338)
T d1bu8a2 137 LSTEMGYSPE-NVHLIGHSLGAHVVGEAGRRLEG--------HVGRITGLDPAEPCF 184 (338)
T ss_dssp HHHHHCCCGG-GEEEEEETHHHHHHHHHHHHTTT--------CSSEEEEESCBCTTT
T ss_pred HHHhcCCCcc-eeEEEeccHHHHHHHHHHHhhcc--------ccccccccccCcCcc
Confidence 33 46 89999999999999999998887 899999999985443
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.16 E-value=1.1e-08 Score=81.70 Aligned_cols=121 Identities=12% Similarity=0.067 Sum_probs=81.3
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCC--ChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR--NWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD- 100 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~- 100 (325)
++.+.+..+-+. ...|+|+++||.+++.. .|.. +...+.+ .++.++.++..+.+.........
T Consensus 20 ~r~~~~~v~~p~---~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~ 88 (288)
T d1sfra_ 20 GRDIKVQFQSGG---ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQ--------SGLSVVMPVGGQSSFYSDWYQPAC 88 (288)
T ss_dssp TEEEEEEEECCS---TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTT--------SSCEEEEECCCTTCTTCBCSSCEE
T ss_pred CcEEEEEEeCCC---CCceEEEEcCCCCCCCcchhhhhhccHHHHHHh--------CCCEEEEeccCCCCCCccccCccc
Confidence 455555554332 45789999999887543 3433 2334443 78899999987765443321100
Q ss_pred -----CCCC-HHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 101 -----PPHD-IANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 101 -----~~~~-~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.... ...+++++..+|++. +.+ ++.+.|+||||..|+.++.++|+ ++.+++.+++...
T Consensus 89 ~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~-r~~i~G~S~GG~~A~~~a~~~pd--------~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 89 GKAGCQTYKWETFLTSELPGWLQANRHVKPT-GSAVVGLSMAASSALTLAIYHPQ--------QFVYAGAMSGLLD 155 (288)
T ss_dssp ETTEEECCBHHHHHHTHHHHHHHHHHCBCSS-SEEEEEETHHHHHHHHHHHHCTT--------TEEEEEEESCCSC
T ss_pred ccccccchhHHHHHHHHhHHHHHHhcCCCCC-ceEEEEEccHHHHHHHHHHhccc--------cccEEEEecCccc
Confidence 1122 334567777777553 445 79999999999999999999999 9999999987643
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.13 E-value=5.7e-10 Score=87.18 Aligned_cols=124 Identities=19% Similarity=0.068 Sum_probs=70.6
Q ss_pred ccceEEEEcccCC-CCCCCceEEEecCCCC--CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSS-DRPYTSTAFVLHGLLG--SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 27 ~~~l~y~~~~~~~-~~~~~~~vv~~HG~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+....+..+.+.. +....|.||++||.+. ....+ ..+..+.+.- ....+-++.++....+....... ...
T Consensus 26 g~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~-~~l~~l~~~~----~~~~~i~v~~~~~~~~~~~~~~~--~~~ 98 (246)
T d3c8da2 26 KNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVW-PVLTSLTHRQ----QLPPAVYVLIDAIDTTHRAHELP--CNA 98 (246)
T ss_dssp TEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCH-HHHHHHHHTT----SSCSCEEEEECCCSHHHHHHHSS--SCH
T ss_pred CCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCcHH-HHHHHHHHhC----CCCceEEeecccccccccccccC--ccH
Confidence 5556666665543 2234688999999542 22333 3445555421 00123344444322111100000 111
Q ss_pred -CHHHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 -DIANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 -~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
-.+.+.+++..++++.. .+ ++.++|+||||..++.++.++|+ ++++++.+++..
T Consensus 99 ~~~~~~~~el~~~v~~~~~~~~d~~-~~~i~G~S~GG~~al~~~~~~P~--------~F~a~~~~sg~~ 158 (246)
T d3c8da2 99 DFWLAVQQELLPLVKVIAPFSDRAD-RTVVAGQSFGGLSALYAGLHWPE--------RFGCVLSQSGSY 158 (246)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCCGG-GCEEEEETHHHHHHHHHHHHCTT--------TCCEEEEESCCT
T ss_pred HHHHHHHHHhhhHHHHhcccccCcc-ceEEEecCchhHHHhhhhccCCc--------hhcEEEcCCccc
Confidence 13334566666666642 24 68999999999999999999999 999999999864
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.12 E-value=1.4e-09 Score=90.71 Aligned_cols=129 Identities=12% Similarity=-0.059 Sum_probs=84.5
Q ss_pred CccccccceEEEEcccCCCCCCCceEEEecCCCCC--------CCC----hHHHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 22 PTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGS--------GRN----WRSFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 22 ~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~--------~~~----~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
..++||.+|....+.+.. ...-|+||+.|+++.. ... +......|++ +||.|+.+|.||
T Consensus 33 ipmrDG~~L~~~v~~P~~-~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~--------~Gy~vv~~d~RG 103 (385)
T d2b9va2 33 VPMRDGVKLYTVIVIPKN-ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVE--------GGYIRVFQDIRG 103 (385)
T ss_dssp EECTTSCEEEEEEEEETT-CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHH--------TTCEEEEEECTT
T ss_pred EECCCCCEEEEEEEEcCC-CCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHh--------CCcEEEEEcCCc
Confidence 355799999999888753 2345777777876421 111 1123445666 899999999999
Q ss_pred CCCCCCCCCCCC-------CC--CHHHHHHHHHHHHHHh-CC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcce
Q 020518 90 HGRSAEIEGLDP-------PH--DIANAANDLANLVKAK-GW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQ 158 (325)
Q Consensus 90 ~G~S~~~~~~~~-------~~--~~~~~~~~l~~~l~~~-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~ 158 (325)
+|.|........ .. .-.+...++.+++.+. .+ +.+|.++|+|+||.+++.+|...|. .++.
T Consensus 104 ~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~--------~l~a 175 (385)
T d2b9va2 104 KYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHP--------ALKV 175 (385)
T ss_dssp STTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCT--------TEEE
T ss_pred ccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCC--------cceE
Confidence 999987532100 01 1112222233333332 22 1279999999999999999999888 8899
Q ss_pred EEEEecCCC
Q 020518 159 LWVLDSVPG 167 (325)
Q Consensus 159 lvli~~~~~ 167 (325)
++...+...
T Consensus 176 ~~~~~~~~d 184 (385)
T d2b9va2 176 AAPESPMVD 184 (385)
T ss_dssp EEEEEECCC
T ss_pred EEEeccccc
Confidence 988877643
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.98 E-value=1.7e-09 Score=88.62 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=78.3
Q ss_pred CCCceEEEecCCCCCC-------CChHH----HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSG-------RNWRS----FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~-------~~~~~----~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 110 (325)
.++-||||+||+.+-. ..|.. +.+.|.+ .|++|++.... ...+.++-++
T Consensus 5 ~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~--------~G~~V~~~~V~------------p~~S~~~RA~ 64 (388)
T d1ku0a_ 5 ANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLND--------NGYRTYTLAVG------------PLSSNWDRAC 64 (388)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHH--------TTCCEEECCCC------------SSBCHHHHHH
T ss_pred CCCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHh--------CCCEEEEeccC------------CccCHHHHHH
Confidence 4678999999986642 45654 6777877 89999999875 5668889999
Q ss_pred HHHHHHHHh----------------------------CCCCCEEEEEeChhHHHHHHHHHHccccc--------------
Q 020518 111 DLANLVKAK----------------------------GWDWPDVVIGHSMGGKVALHFAQSCARAD-------------- 148 (325)
Q Consensus 111 ~l~~~l~~~----------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~-------------- 148 (325)
+|...|+.. +...+++||||||||..+-.++...|+..
T Consensus 65 eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~ 144 (388)
T d1ku0a_ 65 EAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSL 144 (388)
T ss_dssp HHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCC
T ss_pred HHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhcccccccccccccccccc
Confidence 999988742 11128999999999999999998765411
Q ss_pred ---cCCccCCcceEEEEecCCC
Q 020518 149 ---YGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 149 ---~~~~~~~v~~lvli~~~~~ 167 (325)
......+|.+|+-|+++-.
T Consensus 145 ~~l~~~~~~~V~SvTTIsTPH~ 166 (388)
T d1ku0a_ 145 SPLFEGGHRFVLSVTTIATPHD 166 (388)
T ss_dssp CGGGTCCCCCEEEEEEESCCTT
T ss_pred ccccccCCcceEEEEeccCCCC
Confidence 1112236999999998743
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.94 E-value=1.6e-08 Score=80.36 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=74.6
Q ss_pred CCceEEEecCCCC--CCCChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCCC-CCC--CC---CCCCCCCHHH-HHH
Q 020518 43 YTSTAFVLHGLLG--SGRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHGR-SAE--IE---GLDPPHDIAN-AAN 110 (325)
Q Consensus 43 ~~~~vv~~HG~~~--~~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-S~~--~~---~~~~~~~~~~-~~~ 110 (325)
+.|+|+|+||.++ +...|.. +.+.+.+ .++-|+.+|-...+. +.. +. .......+++ +++
T Consensus 28 ~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~--------~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (280)
T d1dqza_ 28 GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQ--------SGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTR 99 (280)
T ss_dssp SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTT--------SSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHT
T ss_pred CCCEEEECCCCCCCCccchhhhcchHHHHHHh--------CCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHH
Confidence 3689999999876 4456664 3334443 789999998432211 110 00 0002334444 478
Q ss_pred HHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 111 DLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 111 ~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+|..+|++. +.+ ++.+.|+||||..|+.+|+++|+ ++.+++.+++...
T Consensus 100 el~~~i~~~~~~d~~-r~~i~G~SmGG~~Al~lA~~~Pd--------~F~av~s~SG~~~ 150 (280)
T d1dqza_ 100 EMPAWLQANKGVSPT-GNAAVGLSMSGGSALILAAYYPQ--------QFPYAASLSGFLN 150 (280)
T ss_dssp HHHHHHHHHHCCCSS-SCEEEEETHHHHHHHHHHHHCTT--------TCSEEEEESCCCC
T ss_pred HHHHHHHHhcCCCCC-ceEEEEechHHHHHHHHHHhCcC--------ceeEEEEecCccC
Confidence 888888764 445 78999999999999999999999 9999999998653
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=2.9e-08 Score=84.43 Aligned_cols=135 Identities=13% Similarity=0.014 Sum_probs=89.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhh-hh---------ccCCCCceEEEEeCCC-CCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLAST-LS---------QTSASSEWRMVLVDLR-NHGRS 93 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-~~---------~~~~~~~~~vi~~D~~-G~G~S 93 (325)
..+..|.|.-+.+.....++|.++++.|.++++..|..+.+ +-.. +. ..+-++-.+++.+|.| |.|.|
T Consensus 29 ~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e-~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS 107 (452)
T d1ivya_ 29 SGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTE-HGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFS 107 (452)
T ss_dssp STTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTT-TSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTC
T ss_pred CCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHc-cCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccc
Confidence 45678998888775554678999999999999988754432 1100 00 0011234589999975 99999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...... ...+..+.+.|+.++|... .-. +++|.|-|.||..+-.+|...-++ ....++++++.++..
T Consensus 108 ~~~~~~-~~~~~~~~a~d~~~~l~~f~~~fp~~~~~-~~yi~GESYgG~y~P~ia~~i~~~----~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 108 YSDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNN-KLFLTGESYAGIYIPTLAVLVMQD----PSMNLQGLAVGNGLS 181 (452)
T ss_dssp EESSCC-CCCBHHHHHHHHHHHHHHHHHHSGGGTTS-CEEEEEETTHHHHHHHHHHHHTTC----TTSCEEEEEEESCCS
T ss_pred cCCCCC-CCCCcHHHHHHHHHHHHHHHHhchhhcCC-ceEEeeccccchhhHHHHHHHHhc----CcccccceEcCCCcc
Confidence 654421 3455667777766655432 334 899999999999988888653220 112688999888764
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.91 E-value=5e-07 Score=71.04 Aligned_cols=117 Identities=10% Similarity=0.031 Sum_probs=72.7
Q ss_pred eEEEEcccCCCCC--CCceEEEecCCCCCCCChH-------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC
Q 020518 30 LAYEEVRSSSDRP--YTSTAFVLHGLLGSGRNWR-------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 30 l~y~~~~~~~~~~--~~~~vv~~HG~~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
..+..+-++.-++ .-|.|+++||.+++...|. .+...+.... ....+.|+.++..+.+....
T Consensus 39 r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~----- 109 (273)
T d1wb4a1 39 KSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNG----ELEPLIVVTPTFNGGNCTAQ----- 109 (273)
T ss_dssp EEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHT----SSCCEEEEECCSCSTTCCTT-----
T ss_pred EEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhh----ccCCceeeccccCCCCCccc-----
Confidence 3555555543222 2478899999988765542 2333333221 11467888888765433211
Q ss_pred CCCCHHHHHHHHHHHHHH---------------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 101 PPHDIANAANDLANLVKA---------------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~---------------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.......+.+...++. .+.+ ++.+.|+||||..++.+|.++|+ ++.+++.+++.
T Consensus 110 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~i~G~S~GG~~a~~~a~~~pd--------~f~a~~~~sg~ 178 (273)
T d1wb4a1 110 --NFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRM-HRGFGGFAMGGLTTWYVMVNCLD--------YVAYFMPLSGD 178 (273)
T ss_dssp --THHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGG-GEEEEEETHHHHHHHHHHHHHTT--------TCCEEEEESCC
T ss_pred --cchhcccccccchhhhhhhhhhhhhhhhcccCCcc-ceEEEeeCCcchhhhhhhhcCCC--------cceEEEEeCcc
Confidence 1222333333333322 2334 79999999999999999999999 99999998876
Q ss_pred C
Q 020518 166 P 166 (325)
Q Consensus 166 ~ 166 (325)
.
T Consensus 179 ~ 179 (273)
T d1wb4a1 179 Y 179 (273)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.80 E-value=9.4e-07 Score=70.14 Aligned_cols=124 Identities=16% Similarity=0.119 Sum_probs=75.4
Q ss_pred ccceEEEEcccCCC-------CCCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCC--------
Q 020518 27 LQTLAYEEVRSSSD-------RPYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRN-------- 89 (325)
Q Consensus 27 ~~~l~y~~~~~~~~-------~~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G-------- 89 (325)
+....|..+-|+.- +..-|+|+++||++++...|... +..++.. .+..|+.++...
T Consensus 25 ~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~-------~~~~vv~~~~~p~~~~~~~~ 97 (299)
T d1pv1a_ 25 KTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADK-------YGFAIVFPDTSPRGDEVAND 97 (299)
T ss_dssp SSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHH-------HTCEEEECCSSCCSTTSCCC
T ss_pred CCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHH-------cCCceecCCCcccccccCCc
Confidence 45566666554321 12347899999999988888542 2223322 466788776432
Q ss_pred --------CCCCCCCCCC----CCCCCHH-HHHHHHHHHHHHh-CC---------CCCEEEEEeChhHHHHHHHHHHc--
Q 020518 90 --------HGRSAEIEGL----DPPHDIA-NAANDLANLVKAK-GW---------DWPDVVIGHSMGGKVALHFAQSC-- 144 (325)
Q Consensus 90 --------~G~S~~~~~~----~~~~~~~-~~~~~l~~~l~~~-~~---------~~~~~lvGhS~Gg~~a~~~a~~~-- 144 (325)
.+.+...... .....++ -+++++..++++. .. + ...|.||||||.-|+.+|.++
T Consensus 98 ~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~-~~~I~G~SmGG~gAl~~al~~~~ 176 (299)
T d1pv1a_ 98 PEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLD-NVAITGHSMGGYGAICGYLKGYS 176 (299)
T ss_dssp TTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSS-SEEEEEETHHHHHHHHHHHHTGG
T ss_pred ccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCccccccccccc-ceEEEeecccHHHHHHHHHHhcC
Confidence 1111111100 0112233 3567777777654 11 3 689999999999999999875
Q ss_pred cccccCCccCCcceEEEEecCC
Q 020518 145 ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 145 p~~~~~~~~~~v~~lvli~~~~ 166 (325)
|+ +..++..+++..
T Consensus 177 p~--------~f~~~~s~s~~~ 190 (299)
T d1pv1a_ 177 GK--------RYKSCSAFAPIV 190 (299)
T ss_dssp GT--------CCSEEEEESCCC
T ss_pred CC--------ceEEEeeccCcC
Confidence 67 888888777654
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.80 E-value=1.9e-06 Score=72.22 Aligned_cols=134 Identities=16% Similarity=0.077 Sum_probs=90.1
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhh---------hhccCCCCceEEEEeC-CCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLAST---------LSQTSASSEWRMVLVD-LRNHGRSAEI 96 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~vi~~D-~~G~G~S~~~ 96 (325)
+..|+|.-+.+.....++|.||++.|.++++..|-.+.+ +-.. ....+-++-.+++.+| .-|.|.|...
T Consensus 27 ~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e-~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~ 105 (421)
T d1wpxa1 27 DKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFE-LGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSG 105 (421)
T ss_dssp CCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHT-TSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCS
T ss_pred CceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHh-cCCcEECCCCccccCCcccccccCEEEEecCCCCCceecC
Confidence 567888877765555678999999999999887754442 1000 0001112446899999 5599999755
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh---------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 97 EGLDPPHDIANAANDLANLVKAK---------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.. ...+-.+.++|+.++|+.. ... +++|.|-|+||..+-.+|.+--++. .....++++++.++..
T Consensus 106 ~~--~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~-~~yi~GESYgG~yvP~la~~i~~~~--~~~inlkGi~iGng~~ 179 (421)
T d1wpxa1 106 SS--GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQ-DFHIAGESYAGHYIPVFASEILSHK--DRNFNLTSVLIGNGLT 179 (421)
T ss_dssp SC--CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCC-CEEEEEETTHHHHHHHHHHHHHHCS--SCSSCCCEEEEESCCC
T ss_pred Cc--cccchHHHHHHHHHHHHHHHHhChhhhccCC-CcEEeeecccccccHHHHHHHHHcc--CCCcceeeeEecCCcc
Confidence 44 4567777888877777532 224 8999999999999888886542211 0112578999888764
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=3.4e-08 Score=77.69 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=37.2
Q ss_pred CcEEEEeeCC--------CCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 258 MEIAIVRAEK--------SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 258 ~P~l~i~g~~--------D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
.|+++.+|+. |..++....+.+.+.+...+. ++++.++||++|.... |..+...|...
T Consensus 197 ~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~----~~~~~~~pG~~Hg~~~--~~s~~~~l~~l 262 (265)
T d2gzsa1 197 KHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGV----NAVFWDFPNLGHGPMF--NASFRQALLDI 262 (265)
T ss_dssp CEEEEEECCC-----------CHHHHHHHHHHHHHHTTC----CEEEEECTTCCHHHHH--HHHHHHHHHHH
T ss_pred CcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCC----CEEEEEcCCCCcchHH--HHHHHHHHHHH
Confidence 3556666655 556666777777777776554 3999999999996432 55566655544
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.59 E-value=3.8e-07 Score=72.80 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=40.4
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD 309 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 309 (325)
.|+++++|.+|..|++...+.+.+.+...... .+++++..+++||-....
T Consensus 91 ~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~--~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 91 RKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNS--ANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp CEEEEEEETTCCSSCHHHHHHHHHHHTTTSCG--GGEEEEEETTCCSSEEES
T ss_pred CCEEEEecCCCCCcCHHHHHHHHHHHHcCcCC--CceEEEEeCCCCCCCCCC
Confidence 58999999999999999999888887654221 248889999999987653
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.33 E-value=1.8e-05 Score=67.22 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=81.9
Q ss_pred ceEEEEcccCCC--CCCCceEEEecCCCCCCCChHHHHHHHHhh-hh--------ccCCCCceEEEEeCCC-CCCCCCCC
Q 020518 29 TLAYEEVRSSSD--RPYTSTAFVLHGLLGSGRNWRSFSRNLAST-LS--------QTSASSEWRMVLVDLR-NHGRSAEI 96 (325)
Q Consensus 29 ~l~y~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-~~--------~~~~~~~~~vi~~D~~-G~G~S~~~ 96 (325)
.+.|..+..... ..+.|.||++.|.++++..+..+.+ +... +. ..+-++-.+++.+|.| |.|.|...
T Consensus 50 ~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS~~g~f~E-~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~ 128 (483)
T d1ac5a_ 50 EYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVE-SGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQ 128 (483)
T ss_dssp EEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHS-SSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSC
T ss_pred eEEEEEEEecCCCCCCCCCEEEEECCCCcHHHHHHHHHc-cCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecC
Confidence 466665544322 2345899999999998877644332 1110 00 0001233579999965 99999654
Q ss_pred CCC-------CCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc----CCccCCcce
Q 020518 97 EGL-------DPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY----GQFVALPKQ 158 (325)
Q Consensus 97 ~~~-------~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~----~~~~~~v~~ 158 (325)
... ....+.++.++++..+|+.. ... +++|.|-|+||..+-.+|...-++.. ......+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~-~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkG 207 (483)
T d1ac5a_ 129 NKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTR-KIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGS-EEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred CCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccC-CeEEeecccccchHHHHHHHHHHhccccccCCCccccee
Confidence 310 12446677888877777643 234 89999999999998888765422110 001125788
Q ss_pred EEEEecCC
Q 020518 159 LWVLDSVP 166 (325)
Q Consensus 159 lvli~~~~ 166 (325)
+.+.++..
T Consensus 208 i~IGNg~~ 215 (483)
T d1ac5a_ 208 LLIGNGWI 215 (483)
T ss_dssp EEEEEECC
T ss_pred eeecCCcc
Confidence 88877653
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.52 E-value=0.00069 Score=58.03 Aligned_cols=113 Identities=12% Similarity=-0.030 Sum_probs=67.2
Q ss_pred CCCCceEEEecCCCC---CCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHH---
Q 020518 41 RPYTSTAFVLHGLLG---SGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAA--- 109 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~---~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~--- 109 (325)
..+.|++|+|||.+. +... .......+.. ++.-||.+++| |+-......+....+.+.|+.
T Consensus 103 ~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~--------~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL 174 (532)
T d1ea5a_ 103 PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYT--------EEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMAL 174 (532)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHH--------HTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHH
T ss_pred CCCCcEEEEEEcCCcccccCCccccCcchhhcc--------cCccEEEEeeccccccccccccccCCCCcccchhHHHHH
Confidence 345799999999753 1211 1111122233 67899999988 343322111111344455544
Q ss_pred HHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 110 NDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 110 ~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
+++.+-|...| .+ +|+|+|||.||..+..+... |. . ...+.+.|+.++....
T Consensus 175 ~WV~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~~~s-p~-~----~~lF~~aI~~Sg~~~~ 228 (532)
T d1ea5a_ 175 QWVHDNIQFFGGDPK-TVTIFGESAGGASVGMHILS-PG-S----RDLFRRAILQSGSPNC 228 (532)
T ss_dssp HHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHC-HH-H----HTTCSEEEEESCCTTC
T ss_pred HHHHHHHHhhcCCcc-ceEeeeecccccchhhhccC-cc-c----hhhhhhheeecccccC
Confidence 44555566665 35 79999999999987777654 22 0 1279999999876543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00068 Score=58.01 Aligned_cols=117 Identities=10% Similarity=-0.058 Sum_probs=67.4
Q ss_pred cCCCCCCCceEEEecCCCCC---CCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHH
Q 020518 37 SSSDRPYTSTAFVLHGLLGS---GRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAA 109 (325)
Q Consensus 37 ~~~~~~~~~~vv~~HG~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~ 109 (325)
+.....+.|++|+|||.+.. ......-...+.+. .+.-|+.+++| |+-...........+.+.|+.
T Consensus 97 P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~-------~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~ 169 (526)
T d1p0ia_ 97 PAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARV-------ERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQ 169 (526)
T ss_dssp ESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHH-------HCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHH
T ss_pred CCCCCCCCceEEEEECCCcccccCcccccCccccccc-------cceeEEecccccccccccCCCCcccccccccccchh
Confidence 33333456899999988643 22221111223221 57889999988 332221111111344455543
Q ss_pred ---HHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 110 ---NDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 110 ---~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+.+-|+..| .+ +|+|+|+|.||..+..+... |. ....+.+.|+.++...
T Consensus 170 ~AL~WV~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~~~s-p~-----~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 170 LALQWVQKNIAAFGGNPK-SVTLFGESAGAASVSLHLLS-PG-----SHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHC-GG-----GGGGCSEEEEESCCTT
T ss_pred hhhhhHHHHHHHhhcCch-heeehhhccccceeeccccC-Cc-----chhhhhhhhccccccc
Confidence 44556666665 34 79999999999988665543 22 1127899999887643
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.44 E-value=0.00027 Score=59.83 Aligned_cols=113 Identities=17% Similarity=0.081 Sum_probs=68.1
Q ss_pred CCCCceEEEecCCCCC---CCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCC-CCCCCCCCCHHHHH---
Q 020518 41 RPYTSTAFVLHGLLGS---GRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAE-IEGLDPPHDIANAA--- 109 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~-~~~~~~~~~~~~~~--- 109 (325)
..+.|++|+|||.+.. ...+..-...+... .+.-|+++++| |+-.... .......+.+.|+.
T Consensus 93 ~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~-------~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL 165 (483)
T d1qe3a_ 93 SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQ-------GEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAAL 165 (483)
T ss_dssp CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHH-------HTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHH
T ss_pred CCCCceEEEEeecccccCCcccccccccccccc-------CceEEEeecccccchhhccccccccccccccccHHHHHHH
Confidence 3456899999998542 22222212223321 56889999998 3322111 11111345555544
Q ss_pred HHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 110 NDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 110 ~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+.+-|...| .+ +|+|+|||.||..+..++.. |. . ...+.+.|+.++...
T Consensus 166 ~WV~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s-p~-~----~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 166 KWVRENISAFGGDPD-NVTVFGESAGGMSIAALLAM-PA-A----KGLFQKAIMESGASR 218 (483)
T ss_dssp HHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHTTC-GG-G----TTSCSEEEEESCCCC
T ss_pred HHHHHHHHHcCCCcc-cceeeccccccchhhhhhcc-cc-c----CCcceeeccccCCcc
Confidence 44556666665 34 79999999999988877754 32 1 128999999998754
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.42 E-value=0.00057 Score=58.72 Aligned_cols=112 Identities=13% Similarity=-0.036 Sum_probs=67.4
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHH---HH
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAA---ND 111 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~---~~ 111 (325)
...|++|+|||.+. +......-...+... ++.-|+++++| |+-.+....+....+.+.|+. +.
T Consensus 110 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~-------~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~W 182 (542)
T d2ha2a1 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQV-------EGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQW 182 (542)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHH-------HCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHH
T ss_pred CCCcEEEEEEECccccccCcccccCchhhhhh-------ccceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHH
Confidence 34589999999753 222211111223321 67889999999 553332221111334444443 44
Q ss_pred HHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 112 LANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 112 l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+-|...| .+ +|+|+|||.||..+..+...... ...+.++|+.++...
T Consensus 183 V~~nI~~FGGDP~-~VTi~G~SAGa~sv~~ll~sp~~------~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 183 VQENIAAFGGDPM-SVTLFGESAGAASVGMHILSLPS------RSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHSHHH------HTTCSEEEEESCCSS
T ss_pred HHHHHHHhhcCcc-ccccccccccccchhhhhhhhhh------hHHhhhheeeccccC
Confidence 555666665 35 79999999999998877664321 127999999987643
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.0034 Score=53.57 Aligned_cols=109 Identities=12% Similarity=0.033 Sum_probs=67.0
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHHH---HH
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANAA---ND 111 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~---~~ 111 (325)
...|++|+|||.+. +...+... ..++. ++.-||++++| |+-.+.... ....+.+.|+. +.
T Consensus 111 ~~lPV~v~ihGG~~~~gs~~~~~~~-~~~~~--------~~vIvVt~nYRLg~~GFl~~~~~~-~~gN~Gl~Dq~~AL~W 180 (532)
T d2h7ca1 111 NRLPVMVWIHGGGLMVGAASTYDGL-ALAAH--------ENVVVVTIQYRLGIWGFFSTGDEH-SRGNWGHLDQVAALRW 180 (532)
T ss_dssp CCEEEEEEECCSTTTSCCSTTSCCH-HHHHH--------HTCEEEEECCCCHHHHHCCCSSTT-CCCCHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCcccccccccCCch-hhhhc--------CceEEEEEeeccCCCccccccccc-cccccccHHHHHHHHH
Confidence 34589999999855 33333322 22233 67899999998 332222211 11344455443 44
Q ss_pred HHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 112 LANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 112 l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+-|...| .+ +|+|+|||.||..+..++.. |. ....+.++|+.++...
T Consensus 181 V~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s-p~-----~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 181 VQDNIASFGGNPG-SVTIFGESAGGESVSVLVLS-PL-----AKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHC-GG-----GTTSCSEEEEESCCTT
T ss_pred HHHHHHHhcCCcc-eeeeeccccccchHHHHHhh-hh-----ccCcchhhhhhccccc
Confidence 556666665 35 79999999999988777653 22 1127899999987643
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.90 E-value=0.0041 Score=52.84 Aligned_cols=111 Identities=18% Similarity=0.061 Sum_probs=63.2
Q ss_pred CCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCC--CCCCCCCCCHHHHH---H
Q 020518 43 YTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAE--IEGLDPPHDIANAA---N 110 (325)
Q Consensus 43 ~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~--~~~~~~~~~~~~~~---~ 110 (325)
..|++|+|||.+- +...+..-...++.. .+.-|+.+++| |+=.+.. ..+ ...+.+.|+. +
T Consensus 96 ~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~-------~~vVvVt~nYRlg~~GFl~~~~~~~~~-~~N~Gl~Dq~~AL~ 167 (517)
T d1ukca_ 96 KLPVWLFIQGGGYAENSNANYNGTQVIQASD-------DVIVFVTFNYRVGALGFLASEKVRQNG-DLNAGLLDQRKALR 167 (517)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTT-------SCCEEEEECCCCHHHHHCCCHHHHHSS-CTTHHHHHHHHHHH
T ss_pred CceEEEEEcCCccccCCCccccchhhhhhhc-------cccceEEEEecccceeecCcccccccc-ccchhHHHHHHHHH
Confidence 3589999999854 222333222222221 56788899988 2222211 000 0234454543 4
Q ss_pred HHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 111 DLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 111 ~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+.+-|...| .+ +|+|+|||.||..+........... ...+.++|+.++..
T Consensus 168 WV~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s~~~~~----~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 168 WVKQYIEQFGGDPD-HIVIHGVSAGAGSVAYHLSAYGGKD----EGLFIGAIVESSFW 220 (517)
T ss_dssp HHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHTGGGTCC----CSSCSEEEEESCCC
T ss_pred HHHHHHHhhcCCcc-cccccccccchhhHHHHHhcccccc----ccccceeeeccccc
Confidence 4555566665 34 7999999999988765554321101 12799999998754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.86 E-value=0.0094 Score=50.76 Aligned_cols=114 Identities=11% Similarity=0.001 Sum_probs=64.3
Q ss_pred CCCCceEEEecCCCCCC---CCh--HHHHH-HHHhhhhccCCCCceEEEEeCCC----CCCCCC----CCCCCCCCCCHH
Q 020518 41 RPYTSTAFVLHGLLGSG---RNW--RSFSR-NLASTLSQTSASSEWRMVLVDLR----NHGRSA----EIEGLDPPHDIA 106 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~---~~~--~~~~~-~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~----~~~~~~~~~~~~ 106 (325)
..+.|++|+|||.+... ..| ..+.. .+... ++.-||++++| |+-... ..+ ..+.+.
T Consensus 111 ~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~-------~~vIvVt~nYRLg~~GFl~~~~~~~~~~---gN~Gl~ 180 (534)
T d1llfa_ 111 GANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMG-------KPIIHVAVNYRVASWGFLAGDDIKAEGS---GNAGLK 180 (534)
T ss_dssp TCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTT-------CCCEEEEECCCCHHHHHCCSHHHHHHTC---TTHHHH
T ss_pred CCCCeEEEEECCCccccCCCCCCCchhccchhhhcc-------CCeEEEEeecCCCcccccCCcccccccc---cccchh
Confidence 35679999999987433 222 22322 22211 78899999999 332221 001 234444
Q ss_pred HHH---HHHHHHHHHhC--CCCCEEEEEeChhHHHHHH-HHHHccccccCCccCCcceEEEEecCC
Q 020518 107 NAA---NDLANLVKAKG--WDWPDVVIGHSMGGKVALH-FAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 107 ~~~---~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~-~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
|+. +++++-|...| .+ +|+|+|||.||..+.. ++....+... .....+.+.|+.++..
T Consensus 181 Dq~~AL~WV~~nI~~FGGDp~-~VTl~G~SaGa~~v~~~l~~~~~~~sp-~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 181 DQRLGMQWVADNIAGFGGDPS-KVTIFGESAGSMSVLCHLIWNDGDNTY-KGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHGGGGCCEE-TTEESCSEEEEESCCS
T ss_pred HHHHHHHHHHhhhhhhccCCc-ceeeeeecchHHHHHHHHhcccccccc-chhhhhhhhhhccCcc
Confidence 443 34555566665 35 7999999999986654 4432211000 0112689999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.72 E-value=0.0048 Score=52.76 Aligned_cols=118 Identities=11% Similarity=0.028 Sum_probs=66.8
Q ss_pred CCCceEEEecCCCCCCC---Ch--HHH-HHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCC-CCCCCCCCHHHH--
Q 020518 42 PYTSTAFVLHGLLGSGR---NW--RSF-SRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEI-EGLDPPHDIANA-- 108 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~---~~--~~~-~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~-~~~~~~~~~~~~-- 108 (325)
...|++|+|||.+-... .+ ..+ ...++.. .+.-||++++| |+-.+... ......+.+.|+
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~-------~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~ 192 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMG-------QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRK 192 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTT-------CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhcc-------CCeEEEecccccccccccCCchhhccccccHHHHHhhh
Confidence 44689999999875432 11 232 2233321 67899999998 33222110 000024444444
Q ss_pred -HHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 109 -ANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 109 -~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+++.+-|.+.| .+ +|+|+|||.||..+..++..............+.++|+.++.+.
T Consensus 193 AL~WV~~nI~~FGGDp~-~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~~ 253 (544)
T d1thga_ 193 GLEWVSDNIANFGGDPD-KVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPL 253 (544)
T ss_dssp HHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCC
T ss_pred hhhhhhhhhcccccCCC-ceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccccc
Confidence 344556666665 34 79999999999877666543210000000127999999997643
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.61 E-value=0.0033 Score=54.29 Aligned_cols=107 Identities=15% Similarity=0.069 Sum_probs=63.9
Q ss_pred CCceEEEecCCCCC---CCC--------hHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHH
Q 020518 43 YTSTAFVLHGLLGS---GRN--------WRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIAN 107 (325)
Q Consensus 43 ~~~~vv~~HG~~~~---~~~--------~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~ 107 (325)
+.|++|+|||.+-. ... |. ...|+.. .+.-|+.+++| |+-.+... .....+-+.|
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~d--g~~la~~-------~~vIvVt~nYRlg~~GFl~~~~~-~~~gN~Gl~D 166 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATR-------GNVIVVTFNYRVGPLGFLSTGDS-NLPGNYGLWD 166 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGC--CHHHHHH-------HTCEEEEECCCCHHHHHCCCSST-TCCCCHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccc--hhhhhcc-------CCEEEEeeccccccccccccccc-CCCccchhhH
Confidence 45899999987532 111 11 1233331 45789999998 33221111 1113455555
Q ss_pred HH---HHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 108 AA---NDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 108 ~~---~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+. +.+.+-|.+.| .+ +|+|+|||.||..+..+...... ...+.+.|+.++..
T Consensus 167 q~~AL~WV~~nI~~FGGDP~-~VTl~G~SAGa~sv~~~l~sp~~------~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 167 QHMAIAWVKRNIEAFGGDPD-QITLFGESAGGASVSLQTLSPYN------KGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHCGGG------TTTCSEEEEESCCT
T ss_pred HHHHHHHHhhhhhhhccCcC-ceEeeecccccchhhhhhhhhcc------cCccccceeccCCc
Confidence 54 44555566665 35 79999999999888766653211 12899999998764
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.57 E-value=0.0016 Score=49.96 Aligned_cols=32 Identities=28% Similarity=0.267 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+.+++++.... ++++.|||+||.+|..+|...
T Consensus 122 i~~~~~~~~~~-~i~vtGHSLGGAlA~L~a~~l 153 (265)
T d3tgla_ 122 VLDQFKQYPSY-KVAVTGHSLGGATVLLCALDL 153 (265)
T ss_dssp HHHHHHHCTTS-EEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCc-eEEEecccchHHHHHHHHHHH
Confidence 33444444445 899999999999999988653
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.55 E-value=0.0017 Score=49.73 Aligned_cols=29 Identities=31% Similarity=0.316 Sum_probs=21.9
Q ss_pred HHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 115 LVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 115 ~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++..... ++++.|||+||.+|..+|...
T Consensus 126 ~~~~~~~~-~i~vtGHSLGGAlA~L~a~~l 154 (265)
T d1lgya_ 126 QLTAHPTY-KVIVTGHSLGGAQALLAGMDL 154 (265)
T ss_dssp HHHHCTTC-EEEEEEETHHHHHHHHHHHHH
T ss_pred HHhhCCCc-eEEEEecccchHHHHHHHHHH
Confidence 33333434 899999999999999888653
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.51 E-value=0.0037 Score=47.73 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+..++++.... ++++.|||+||.+|..++.....
T Consensus 115 i~~~~~~~~~~-~i~vTGHSLGGAlA~L~a~~l~~ 148 (261)
T d1uwca_ 115 VKQQASQYPDY-ALTVTGHSLGASMAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHSTTS-EEEEEEETHHHHHHHHHHHHHHT
T ss_pred HHHHHhhCCCc-ceEEeccchhHHHHHHHHHHHHh
Confidence 33333333434 89999999999999998876543
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.47 E-value=0.0016 Score=50.07 Aligned_cols=32 Identities=31% Similarity=0.300 Sum_probs=23.3
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
..++.+.... ++++.|||+||.+|..++....
T Consensus 128 ~~~~~~~~~~-~i~iTGHSLGGAlA~L~a~~l~ 159 (271)
T d1tiaa_ 128 KEVVAQNPNY-ELVVVGHSLGAAVATLAATDLR 159 (271)
T ss_pred HHHHHhCCCc-eEEEeccchHHHHHHHHHHHHH
Confidence 3333333334 8999999999999999887643
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.41 E-value=0.0023 Score=49.13 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=24.2
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
..++++...- ++++.|||+||.+|..++.....
T Consensus 129 ~~~~~~~~~~-~i~vtGHSLGGalA~l~a~~l~~ 161 (269)
T d1tiba_ 129 EDAVREHPDY-RVVFTGHSLGGALATVAGADLRG 161 (269)
T ss_dssp HHHHHHCTTS-EEEEEEETHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCc-ceeeeccchHHHHHHHHHHHHHh
Confidence 3333333334 89999999999999999986543
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.38 E-value=0.0056 Score=52.68 Aligned_cols=112 Identities=13% Similarity=-0.106 Sum_probs=63.3
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCC------CCCCCCCCCCCHHHH
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRS------AEIEGLDPPHDIANA 108 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S------~~~~~~~~~~~~~~~ 108 (325)
...|++|+|||.+- +......-...|+.. .+.-|+++++| |+-.. .........+.+.|+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~-------~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq 209 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNADIMAAV-------GNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQ 209 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHH-------HTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccchhhhhhc-------CCeeEEeecceeccccccccccccccccccCCCCcccchHH
Confidence 44689999999753 222221112233331 45677889988 22211 001110134445554
Q ss_pred HH---HHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 109 AN---DLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 109 ~~---~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.. .+.+-|...| .+ +|+|+|||.||..+..+... |. ....+.++|+.++...
T Consensus 210 ~~AL~WV~~nI~~FGGDP~-~VTl~G~SAGa~sv~~ll~s-p~-----~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 210 ALAIRWLKDNAHAFGGNPE-WMTLFGESAGSSSVNAQLMS-PV-----TRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHHHHSTGGGTEEEE-EEEEEEETHHHHHHHHHHHC-TT-----TTTSCCEEEEESCCTT
T ss_pred HHHHHHHHHhhhhhccCCC-ceEeccccCccceeeeeecc-cc-----ccccccccceeccccc
Confidence 43 3445555565 35 79999999999988776654 22 1127889998887543
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.63 E-value=0.13 Score=36.92 Aligned_cols=111 Identities=13% Similarity=-0.044 Sum_probs=61.1
Q ss_pred eEEEecCCCCCCC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhC
Q 020518 46 TAFVLHGLLGSGR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL--DPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 46 ~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~~~l~~~l~~~~ 120 (325)
.||+.-|-+.... .-..+...|...+.. ....+..++++--......... .......++...+....++-
T Consensus 19 ~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~----~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~C- 93 (197)
T d1cexa_ 19 IFIYARGSTETGNLGTLGPSIASNLESAFGK----DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKC- 93 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCT----TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhcCC----CcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhC-
Confidence 4566666655432 223466666655421 3456666665422111100000 01112344555555555554
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
++.+++|+|+|.|+.++-.++...+... ..+|.++++++-+
T Consensus 94 P~tkiVL~GYSQGA~V~~~~~~~l~~~~----~~~V~avvlfGDP 134 (197)
T d1cexa_ 94 PDATLIAGGYSQGAALAAASIEDLDSAI----RDKIAGTVLFGYT 134 (197)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHSCHHH----HTTEEEEEEESCT
T ss_pred CCCeEEEeeeccccHhhhcccccCChhh----hhhEEEEEEEeCC
Confidence 4449999999999999999887653211 1289999998854
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=94.98 E-value=0.1 Score=37.83 Aligned_cols=92 Identities=14% Similarity=0.047 Sum_probs=50.2
Q ss_pred eEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C
Q 020518 46 TAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK---G 120 (325)
Q Consensus 46 ~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~---~ 120 (325)
.||+.-|-+.+.. .-..+...+.+.+ .+-.+..+++|..-............|..+=+.++...+... .
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~------~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C 79 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAH------PGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSC 79 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS------TTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCCCCCCCcchHHHHHHHHhC------CCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhC
Confidence 3555555554432 1234555555544 567888899887543322111001112233233333333322 3
Q ss_pred CCCCEEEEEeChhHHHHHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
++.+++|+|+|.|+.++-.++..
T Consensus 80 P~tkivl~GYSQGA~V~~~~l~~ 102 (207)
T d1qoza_ 80 PDTQLVLVGYSQGAQIFDNALCG 102 (207)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHC
T ss_pred CCCeEEEEeeccchHHHHHHHhc
Confidence 34499999999999999988753
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=94.77 E-value=0.12 Score=37.51 Aligned_cols=91 Identities=14% Similarity=0.080 Sum_probs=50.0
Q ss_pred eEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C
Q 020518 46 TAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK---G 120 (325)
Q Consensus 46 ~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~---~ 120 (325)
.||++-|-+.+.. .-..+...+.+.+ .+-.+..+++|...............|..+=+..+...|... .
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~------~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~C 79 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAY------PGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQC 79 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS------TTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhc------CCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhC
Confidence 3566666654321 2234555565555 567888899886433221111001113333333344444332 3
Q ss_pred CCCCEEEEEeChhHHHHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
.+.+++|+|+|.|+.++-.++.
T Consensus 80 P~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 80 PSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp TTCEEEEEEETHHHHHHHHHHH
T ss_pred CCCcEEEEeeccccHHHHHHHh
Confidence 3448999999999999988764
|