Citrus Sinensis ID: 020543

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
Protein Sequence
MRMSANRIDSHGDDNMAMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccHHHHHHHHcccccccccccccccccccccccccccEEEEEEEccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccEcccccccccEcccccccccccccccccHHHHHcccccccccccccccccHccccccccHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHcccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEccc
Coil and Loop (DISEMBL)
mrmsanridshgddnmamdysgtlssnpgdskswnwqgeefclqkgsnfdmsgsqfnevilneedlsymlddettpvkscgdlayqathsgkmskdpkehrETYSQAKRRRMlqfdpqvldsslccdempsafqksneredsveevlpgvsqwttglsglsasncdgldsFEGWIAEclndpemtftpddmnfseasdiQIDISefcnstnslptcntnvvqqqvtrtprnvvfkgrksllrtptklassvaypfafikpcgihgdvtlndinqrihspgsktkqniddpsayptsafsgkpvvgktkihteggkgsITIMRTKG
Flexible Loop (DISEMBL)
mrmsanridshgddnmaMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQAthsgkmskdpkeHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTnvvqqqvtrtprnvvfkgrksllrtptklassvAYPFAFIKPCGIHGDVTLNDINQRIhspgsktkqniddpsayptsafsgkpvvgktkihteggkgsitimrtkg
Low Complexity Region (SEG)
MRMSANRIDSHGDDNMAMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG
Disordered region (IsUnstruct)
*********************************WNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLD***************************************************************************LPGVSQWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDIN****************************************************
Disordered Region (DISOPRED)
***********GDDNMAMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSG****************KRRRMLQFDP*********************REDSVEEVLPGVSQWTT************LDSFEGWIAECLNDPE*******************************************************************VAYPFAFIKPCGIHGDVTLNDINQR***********************SGKPVVGKTKIHTEGGKGSITIMRTK*
Disordered Region (DISEMBL)
********DSHGDDNMAMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQAT******************AKRRRMLQFDPQVLDSSLCCDEMPSA**************LPGVSQWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG
Disordered Region (DISPRO)
************DDNMAMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSK******ETYSQAKRRRMLQFD***********************************QWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNF****************************************************KLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRMSANRIDSHGDDNMAMDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGLSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	325	2.2.26 [Sep-21-2011]
Q6NLW5	300	Protein XRI1 OS=Arabidops	yes	no	0.889	0.963	0.530	9e-77

>sp|Q6NLW5|XRI1_ARATH Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2

 Score =  287 bits (734), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 158/298 (53%), Positives = 201/298 (67%), Gaps = 9/298 (3%)

Query: 31  SKSWNWQGEEFCLQKGSNF-DMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATH 89
           S SWNWQ + +  Q  S+F D+      EV LN+ED SYM DDE TPVK+C +L Y  T 
Sbjct: 9   SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 67

Query: 90  SGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPG 149
           +   ++  + H ET S  KRRRMLQF+ Q  ++SL   E  SA  KS+ R+D+ +E+LP 
Sbjct: 68  TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 126

Query: 150 VSQWTTGLS-GLSASNCDGLDSF-EGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFC 207
            SQ   G S   SAS+ +GLD + E W A+CLND E    PDD+NF  + D+Q+DISE+ 
Sbjct: 127 GSQLIEGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNFG-SPDVQVDISEYL 185

Query: 208 NSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDV 267
           N     P   T  VQ+ VTR+  NV+FKGRKS  R  +KL SS+ YPFAFIKPCG+HG +
Sbjct: 186 NVP---PETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 242

Query: 268 TLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
           TL DINQ+I +P +K K +I++P+   TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct: 243 TLKDINQKIRNPPAKPKAHIEEPAVIQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

Required for mitotic division of the generative cell nucleus and the development of mature tricellular pollen grains, and for male and female meiosis.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
255560125	293	conserved hypothetical protein [Ricinus	0.833	0.924	0.659	2e-99
224069822	280	predicted protein [Populus trichocarpa]	0.833	0.967	0.631	2e-90
356559041	309	PREDICTED: protein XRI1-like [Glycine ma	0.926	0.974	0.560	3e-88
449453276	304	PREDICTED: protein XRI1-like [Cucumis sa	0.886	0.947	0.58	6e-85
356506666	327	PREDICTED: LOW QUALITY PROTEIN: protein	0.867	0.862	0.571	7e-83
356527366	302	PREDICTED: protein XRI1-like [Glycine ma	0.910	0.980	0.522	1e-81
363808040	298	uncharacterized protein LOC100791247 [Gl	0.907	0.989	0.524	3e-79
147771043	320	hypothetical protein VITISV_010925 [Viti	0.790	0.803	0.587	2e-76
238481516	300	protein XRI1 [Arabidopsis thaliana] gi|2	0.889	0.963	0.530	5e-75
297792063	266	hypothetical protein ARALYDRAFT_494937 [	0.812	0.992	0.544	4e-71

>gi|255560125|ref|XP_002521080.1| conserved hypothetical protein [Ricinus communis] gi|223539649|gb|EEF41231.1| conserved hypothetical protein [Ricinus communis]

 Score =  368 bits (945), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 192/291 (65%), Positives = 220/291 (75%), Gaps = 20/291 (6%)

Query: 50  DMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSKDPKEHRETYSQAKR 109
           D+S   +NEV LNEEDLSYMLD ETTPVK+CGDLAY   HS  M K+P+EHRET SQ KR
Sbjct: 8   DVSECLWNEVTLNEEDLSYMLD-ETTPVKACGDLAYHVNHSDNMHKEPEEHRETSSQLKR 66

Query: 110 RRMLQFDPQVLDSSLCCDEMPSAFQKSN-----------EREDSVEEVLPGVSQWTTGLS 158
           RRMLQFD Q  DS LC +E+ S F +SN           EREDS+EEVLP  S W  G S
Sbjct: 67  RRMLQFDTQAADSPLCHEEISSVFLQSNATVNVFVTYVQEREDSLEEVLPQASDWVPGFS 126

Query: 159 G-LSASNCDGLD-SFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTC 216
             +SAS+ + LD S EGW+A+C ND EM  +P+DMNF  A D+QIDISEFCN     P  
Sbjct: 127 ADVSASSYEALDHSSEGWLADCFNDTEMGLSPNDMNFPGACDVQIDISEFCNG----PLG 182

Query: 217 N-TNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQR 275
           N  + VQ+++TRTPRNV+FKG+KS +RTPTKLASSV YPFAFIKPCG HGDVTL DINQ+
Sbjct: 183 NEAHAVQKRITRTPRNVIFKGKKSFIRTPTKLASSVVYPFAFIKPCGFHGDVTLKDINQK 242

Query: 276 IHS-PGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
           I + P SK KQN +DP+AYPTSAFSGKPVVGKTKI TEGGKGSITIMRTKG
Sbjct: 243 IRTPPPSKLKQNEEDPAAYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069822|ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|222844774|gb|EEE82321.1| predicted protein [Populus trichocarpa]

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 180/285 (63%), Positives = 210/285 (73%), Gaps = 14/285 (4%)

Query: 50  DMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSG-------KMSKDPKEHRE 102
           D+S   +NEV LN EDLSYMLD ETTPVK+C DLAY   H G        M+K+P+E RE
Sbjct: 1   DVSQRLWNEVTLNGEDLSYMLD-ETTPVKACADLAYHVNHDGMVLWMSDNMNKEPEERRE 59

Query: 103 TYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGLSGLSA 162
           T  Q KRRR LQFD  + DS  C +++ S F KSNE E+S+EEV P  SQW +G   +SA
Sbjct: 60  TCFQFKRRR-LQFDTHLADSPFCDEDLTSVFLKSNETEESLEEVFPQASQWDSGYQDMSA 118

Query: 163 SNCDGLD-SFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVV 221
           S  +GLD S + WIA+C ND  M F+P+DMNF  ASDIQIDIS+FCN     P    + V
Sbjct: 119 SCYNGLDPSSDPWIADCFNDSGMHFSPNDMNFPGASDIQIDISDFCNDP---PEFEASTV 175

Query: 222 QQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHS-PG 280
           Q+ V RTPRNVVFKG KS ++TPTKLA+SVAYPFAFIKPCG+HGDVTLN+INQRI + P 
Sbjct: 176 QKCVPRTPRNVVFKGTKSFIQTPTKLATSVAYPFAFIKPCGVHGDVTLNEINQRIRTPPP 235

Query: 281 SKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
           SK+KQ  +DP  YP SAFSGKPVVGKTKI TEGGKGSITIMRTKG
Sbjct: 236 SKSKQKDEDPVVYPMSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559041|ref|XP_003547810.1| PREDICTED: protein XRI1-like [Glycine max]

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 177/316 (56%), Positives = 224/316 (70%), Gaps = 15/316 (4%)

Query: 18  MDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPV 77
           MDY+   +++ G  + W+WQG+++ L++  +F++S   +N+V  NEEDLSYMLDDETTPV
Sbjct: 1   MDYN---NNDHGAREPWDWQGKKYSLRRTFDFEISEELWNDVPQNEEDLSYMLDDETTPV 57

Query: 78  KSCGDLAYQATHSGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSN 137
           K+CGDLAY   ++  M K+ +E RETYSQAKRRRMLQF+ Q  D SL  + M  ++ K N
Sbjct: 58  KACGDLAYNVNNADNMQKELEECRETYSQAKRRRMLQFNSQESDQSLSNEGMSLSYLK-N 116

Query: 138 EREDSVEEVLPGVSQWTTG-----LSGLSASNCDGLDSFEGWIAECLNDPEMTFTPDDMN 192
            +ED V+E+ P VSQW +G     L   SAS+   L+S E W+A+  ND EM  +P+++ 
Sbjct: 117 GKEDPVKEIFPEVSQWVSGASDFTLGNASASDYVDLESTETWLADYFNDAEMDISPEELK 176

Query: 193 FSEASDIQIDISEFCNSTNSLPTCNTNVVQQ-QVTRTPRNVVFKGRKSLLRTPTKLASSV 251
           FS A D+QID +E        P+   NVVQQ  + RT RN++FKGRKS +  PTKLASSV
Sbjct: 177 FSVADDVQIDGTEVSAIK---PSREQNVVQQTHIPRTTRNIIFKGRKSFIHMPTKLASSV 233

Query: 252 AYPFAFIKPCGIHGDVTLNDINQRIHSPGS-KTKQ-NIDDPSAYPTSAFSGKPVVGKTKI 309
           AYPFAFIKP G HGDVTL +INQ I +P   K+KQ N DDPSAYP SAFSGKPVVGKTKI
Sbjct: 234 AYPFAFIKPSGAHGDVTLKEINQHIQTPPPLKSKQSNDDDPSAYPKSAFSGKPVVGKTKI 293

Query: 310 HTEGGKGSITIMRTKG 325
            TEGGKGSITI RTKG
Sbjct: 294 RTEGGKGSITITRTKG 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453276|ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativus] gi|449529551|ref|XP_004171763.1| PREDICTED: protein XRI1-like [Cucumis sativus]

 Score =  320 bits (820), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 174/300 (58%), Positives = 216/300 (72%), Gaps = 12/300 (4%)

Query: 33  SWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGK 92
           +WNW+G+ + +QK ++ ++S   ++ V  N  DLSY+ D ETTPVK+CGDLAY  T S  
Sbjct: 10  TWNWEGDGYTIQKDTDIEISECLWDGVSENG-DLSYVFD-ETTPVKACGDLAYHVTCSDD 67

Query: 93  MSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQ 152
            +K  +E RET+SQAKRRRMLQF  Q L++S+C +++ S F KS+ +  S    L  VS 
Sbjct: 68  RNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPAALAEVSY 127

Query: 153 WTTGLSGLS----ASNCDGLD-SFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFC 207
                SGL+     S  + LD S EGWIAECLND +M  +P+D++F+  SDIQID+SEFC
Sbjct: 128 GIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFC 187

Query: 208 NSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDV 267
           +     P   +NVVQ   TR P N++FKGRKS +RTPTKLASSVAYPFAFIKPCG HGDV
Sbjct: 188 DGA---PEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 244

Query: 268 TLNDINQRIHS-PGSKTKQNIDDPS-AYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
           TL DINQRI + P SK K   +DPS +YPTSAFSGKPVVGKTKIHTEGGKGSITIMRT+G
Sbjct: 245 TLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506666|ref|XP_003522097.1| PREDICTED: LOW QUALITY PROTEIN: protein XRI1-like [Glycine max]

 Score =  313 bits (802), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 172/301 (57%), Positives = 211/301 (70%), Gaps = 19/301 (6%)

Query: 29  GDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQAT 88
           G  + W+W G+   L K ++F++S   +N+V  NEEDLSYMLDDETTPVK+CGDL     
Sbjct: 42  GAREPWDWHGKNISLGKTADFEISEELWNDVPQNEEDLSYMLDDETTPVKACGDL----- 96

Query: 89  HSGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLP 148
                  +P+E RETYSQ KRRRMLQF+ Q  D SL  +EM  ++ K N +ED V+E+ P
Sbjct: 97  -------EPEECRETYSQXKRRRMLQFNSQDSDQSLSNEEMSLSYLK-NGKEDPVKEIFP 148

Query: 149 GVSQWTTGLSG-LSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFC 207
            VSQW +G SG  SAS+   L+S E W+A+  ND  M F+P+++NFS A  +QID     
Sbjct: 149 EVSQWVSGASGNASASDYVDLESTETWLADYFNDAVMDFSPEELNFSVADGVQIDDGTEV 208

Query: 208 NSTNSLPTCNTNVVQQ-QVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGD 266
           ++    P+   NVVQQ  V RT  N++FKGRKS +  PTKLASSVAYPFAFIKP G HGD
Sbjct: 209 SAIT--PSHEQNVVQQTHVPRTTCNIIFKGRKSFIHMPTKLASSVAYPFAFIKPSGAHGD 266

Query: 267 VTLNDINQRIHSPG-SKTKQNI-DDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTK 324
           VTL +INQRI +P  SK+ Q+I DDPSAYP SAFSGKPVVGKTKI TEGGKGSITI RTK
Sbjct: 267 VTLKEINQRIQTPSPSKSNQSIDDDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITITRTK 326

Query: 325 G 325
           G
Sbjct: 327 G 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527366|ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 164/314 (52%), Positives = 214/314 (68%), Gaps = 18/314 (5%)

Query: 18  MDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPV 77
           MDYS        + + W+W  E++CLQ+  N+++S   +N V  NE DLS++ +DETTPV
Sbjct: 1   MDYSND------NKEPWDWHREDYCLQRSFNYEISPGIWNGVSQNE-DLSFVFNDETTPV 53

Query: 78  KSCGDLAYQATHSGKMS--KDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQK 135
           K+CGD AY   +S   +  K+  +  ++  Q KRRRMLQF+ Q     L  ++M SA+ K
Sbjct: 54  KACGDFAYNVNNSESNNVQKESDKCLKSSYQIKRRRMLQFNSQDGGHLLSNEQMSSAYLK 113

Query: 136 SNEREDSVEEVLPGVSQWTTGLSG-LSASNCDGLDSFEGWIAECLNDPEMTFTPDDMNFS 194
              +E+  E+V P  SQW +G  G  SASN + L+S EGW+A+C  D EM   PDD+NFS
Sbjct: 114 G--KEEPKEDVFPEFSQWVSGTPGSASASNYEDLESAEGWLADCFKDAEMQLCPDDLNFS 171

Query: 195 EASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYP 254
            A ++Q+D+++  N     P C  NVVQ   T+TP+N++FKG KS + TPTKLA+SVAYP
Sbjct: 172 GADEVQVDVADLGNFP---PACEQNVVQHGFTQTPKNIIFKGGKSFIETPTKLAASVAYP 228

Query: 255 FAFIKPCGIHGDVTLNDINQRIHSPGSKTK---QNIDDPSAYPTSAFSGKPVVGKTKIHT 311
           FAFIKPCG HGDVTL +INQRI SP    K   Q+++DPSAYP SAFSGKPVVGKT+IH 
Sbjct: 229 FAFIKPCGAHGDVTLKEINQRILSPPPPLKSQQQSMEDPSAYPKSAFSGKPVVGKTRIHI 288

Query: 312 EGGKGSITIMRTKG 325
           EGGKGSITIMRTKG
Sbjct: 289 EGGKGSITIMRTKG 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808040|ref|NP_001242722.1| uncharacterized protein LOC100791247 [Glycine max] gi|255647285|gb|ACU24109.1| unknown [Glycine max]

 Score =  301 bits (771), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 163/311 (52%), Positives = 215/311 (69%), Gaps = 16/311 (5%)

Query: 18  MDYSGTLSSNPGDSKSWNWQGEEFCLQKGSNFDMSGSQFNEVILNEEDLSYMLDDETTPV 77
           MDYS        + + W+W  E++CLQ+  +++ S   +N V  NE DLS + +DETTPV
Sbjct: 1   MDYSND------NKEPWDWHREDYCLQRSFDYENSQGLWNGVPQNE-DLSNVFNDETTPV 53

Query: 78  KSCGDLAYQATHSGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSN 137
           K+CGD AY   +S ++ K+  +  ++  Q KRRRMLQF+ Q     L  + M SA+ K  
Sbjct: 54  KACGDFAYNVNNS-ELQKESDKCLKSSDQIKRRRMLQFNTQDGGHFLSNEHMSSAYLKG- 111

Query: 138 EREDSVEEVLPGVSQWTTGLSGLSAS-NCDGLDSFEGWIAECLNDPEMTFTPDDMNFSEA 196
            +E+S E+V P +S W +G SG +++ N + L+S EGW+A+C  D EM   PDD+NFS A
Sbjct: 112 -KEESNEDVFPELSHWVSGASGSASASNYEDLESAEGWLADCFKDAEMQLCPDDLNFSGA 170

Query: 197 SDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFA 256
             +QID+++ CN     P C  NV+Q  VT+TP+N+VFKG KS + TPTKLA+SVAYPF 
Sbjct: 171 DAVQIDVADLCNFP---PACEQNVLQHHVTQTPKNIVFKGGKSFIETPTKLAASVAYPFT 227

Query: 257 FIKPCGIHGDVTLNDINQRIHSPGS--KTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGG 314
           FIKPCG HGDVTL +INQRI SP    K++Q+++DPSAYP SAFSGKPVVGKTKIH EGG
Sbjct: 228 FIKPCGAHGDVTLKEINQRILSPPPPLKSQQSMEDPSAYPKSAFSGKPVVGKTKIHIEGG 287

Query: 315 KGSITIMRTKG 325
           KGSITIM TKG
Sbjct: 288 KGSITIMGTKG 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771043|emb|CAN65243.1| hypothetical protein VITISV_010925 [Vitis vinifera]

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 165/281 (58%), Positives = 196/281 (69%), Gaps = 24/281 (8%)

Query: 50  DMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSKDPKEHRETYSQAKR 109
           D+S   ++ V  NEEDLSYM D ETTPVK+CGDLAY  T  G ++     H     Q K 
Sbjct: 59  DISQCLWDGVTQNEEDLSYMFD-ETTPVKACGDLAYHVTDGGILAL----HCLPJLQLK- 112

Query: 110 RRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGL-SGLSASNCDGL 168
               ++ P  ++    C E  S      ERE  VEE  P  SQW +G    +S S  +GL
Sbjct: 113 ----EWIPGNMNKETECKETCS-----QERESFVEETQPDASQWVSGFPENMSVSGYEGL 163

Query: 169 D-SFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPT-CNTNVVQQQVT 226
           D S EGW+AEC ND EM F+PDDMN SE SD+QID++EF N    +PT    N VQ++ T
Sbjct: 164 DKSSEGWLAECFNDAEMHFSPDDMNLSEISDVQIDVTEFYN----IPTEYEANTVQERAT 219

Query: 227 RTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHS-PGSKTKQ 285
           RTP+NV+FKGRKS +RTPTKLASSVAYPFAFIKPCG+HGDVTL DINQRI + P SK++Q
Sbjct: 220 RTPQNVIFKGRKSYMRTPTKLASSVAYPFAFIKPCGVHGDVTLKDINQRIRTPPPSKSRQ 279

Query: 286 NIDDPS-AYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
           + +DPS +YPTSAFSGKPVVGKTKI TEGGKGSITIMRTKG
Sbjct: 280 SNEDPSVSYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238481516|ref|NP_001154770.1| protein XRI1 [Arabidopsis thaliana] gi|239977726|sp|Q6NLW5.2|XRI1_ARATH RecName: Full=Protein XRI1; AltName: Full=Protein X-RAY INDUCED 1 gi|332008333|gb|AED95716.1| protein XRI1 [Arabidopsis thaliana]

 Score =  287 bits (734), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 158/298 (53%), Positives = 201/298 (67%), Gaps = 9/298 (3%)

Query: 31  SKSWNWQGEEFCLQKGSNF-DMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATH 89
           S SWNWQ + +  Q  S+F D+      EV LN+ED SYM DDE TPVK+C +L Y  T 
Sbjct: 9   SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 67

Query: 90  SGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPG 149
           +   ++  + H ET S  KRRRMLQF+ Q  ++SL   E  SA  KS+ R+D+ +E+LP 
Sbjct: 68  TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 126

Query: 150 VSQWTTGLS-GLSASNCDGLDSF-EGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFC 207
            SQ   G S   SAS+ +GLD + E W A+CLND E    PDD+NF  + D+Q+DISE+ 
Sbjct: 127 GSQLIEGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNFG-SPDVQVDISEYL 185

Query: 208 NSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDV 267
           N     P   T  VQ+ VTR+  NV+FKGRKS  R  +KL SS+ YPFAFIKPCG+HG +
Sbjct: 186 NVP---PETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 242

Query: 268 TLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
           TL DINQ+I +P +K K +I++P+   TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct: 243 TLKDINQKIRNPPAKPKAHIEEPAVIQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792063|ref|XP_002863916.1| hypothetical protein ARALYDRAFT_494937 [Arabidopsis lyrata subsp. lyrata] gi|297309751|gb|EFH40175.1| hypothetical protein ARALYDRAFT_494937 [Arabidopsis lyrata subsp. lyrata]

 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/272 (54%), Positives = 188/272 (69%), Gaps = 8/272 (2%)

Query: 56  FNEVILNEEDLSYMLDDETTPVKSCGDLAYQATHSGKMSKDPKEHRETYSQAKRRRMLQF 115
             EV LN+ED SYM DDETTPVK+C +L Y  T +   ++  + H ET S  KRRRMLQF
Sbjct: 1   MTEVTLNQEDHSYMFDDETTPVKACSELGYHVT-TEDTNRKMEVHSETRSALKRRRMLQF 59

Query: 116 DPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPGVSQWTTGLS-GLSASNCDGLDSF-EG 173
           + Q  ++SL   E  SA  KS+ R+++ +E+LP  SQ   G S   SAS+ +GLD + E 
Sbjct: 60  EDQP-ETSLFSSESFSAILKSSARDETFDELLPEGSQLIEGFSEDASASSFEGLDLYAEE 118

Query: 174 WIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTRTPRNVV 233
           W AECLND E    PDD++F  + D+Q+DISE+ N     P   T   Q+ VTR+  NV+
Sbjct: 119 WYAECLNDAETPMLPDDLSFG-SPDVQVDISEYLNVP---PETETREAQRPVTRSSPNVI 174

Query: 234 FKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSKTKQNIDDPSAY 293
           FKGRKS  R  +KL SS+ YPFAFIKPCG+HG +TL DINQ+I +P +K KQ+I++P+  
Sbjct: 175 FKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKQHIEEPAVI 234

Query: 294 PTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
            TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct: 235 QTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
TAIR|locus:2156519	300	XRI1 "AT5G48720" [Arabidopsis	0.889	0.963	0.530	4e-74
TAIR|locus:2041110	213	AT2G01990 "AT2G01990" [Arabido	0.430	0.657	0.320	8.5e-14
TAIR|locus:2204538	226	AT1G14630 "AT1G14630" [Arabido	0.455	0.654	0.325	2.4e-10

TAIR|locus:2156519 XRI1 "AT5G48720" [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 158/298 (53%), Positives = 201/298 (67%)

Query:    31 SKSWNWQGEEFCLQKGSNF-DMSGSQFNEVILNEEDLSYMLDDETTPVKSCGDLAYQATH 89
             S SWNWQ + +  Q  S+F D+      EV LN+ED SYM DDE TPVK+C +L Y  T 
Sbjct:     9 SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 67

Query:    90 SGKMSKDPKEHRETYSQAKRRRMLQFDPQVLDSSLCCDEMPSAFQKSNEREDSVEEVLPG 149
             +   ++  + H ET S  KRRRMLQF+ Q  ++SL   E  SA  KS+ R+D+ +E+LP 
Sbjct:    68 TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 126

Query:   150 VSQWTTGLS-GLSASNCDGLDSF-EGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFC 207
              SQ   G S   SAS+ +GLD + E W A+CLND E    PDD+NF  + D+Q+DISE+ 
Sbjct:   127 GSQLIEGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNFG-SPDVQVDISEYL 185

Query:   208 NSTNSLPTCNTNVVQQQVTRTPRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDV 267
             N     P   T  VQ+ VTR+  NV+FKGRKS  R  +KL SS+ YPFAFIKPCG+HG +
Sbjct:   186 NVP---PETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 242

Query:   268 TLNDINQRIHSPGSKTKQNIDDPSAYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTKG 325
             TL DINQ+I +P +K K +I++P+   TSAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct:   243 TLKDINQKIRNPPAKPKAHIEEPAVIQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006281 "DNA repair" evidence=IMP

GO:0007140 "male meiosis" evidence=IMP

GO:0007143 "female meiosis" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0010165 "response to X-ray" evidence=IEP

GO:0006302 "double-strand break repair" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

GO:0010332 "response to gamma radiation" evidence=RCA

GO:0043687 "post-translational protein modification" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2041110 AT2G01990 "AT2G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
 Identities = 50/156 (32%), Positives = 76/156 (48%)

Query:   178 CLNDPEMTFTPDDMNFSEASDIQIDISEFCNST--NSLPTCNTNVVQQQVTRTPRNVVFK 235
             CLN     F    +N  E    +I    +C  T  N   + +T+V   ++    ++    
Sbjct:    66 CLNSQ---FVTPHVNTGE----RISGVSYCQETISNVYESPDTSVSYDKIYVREKSPTEP 118

Query:   236 GRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRI-HSPGSKTKQNIDDPSAYP 294
                +      +L + + YPF  +KP G   DVTLNDIN+RI  +P    +  + D ++ P
Sbjct:   119 SSSNCGNKNKRLITKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRP 178

Query:   295 TSA-----FSGKPVVGKTKIHTEGGKGSITIMRTKG 325
               +      SGK VV  TKI T+G +G+ITI+RTKG
Sbjct:   179 CVSGRGPGLSGKAVVALTKIQTQG-RGTITIIRTKG 213

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2204538 AT1G14630 "AT1G14630" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 53/163 (32%), Positives = 80/163 (49%)

Query:   170 SFEGWIAECLNDPEMTFTPDDMNFSEASDIQIDISEFCNSTNSLPTCNTNVVQQQVTR-T 228
             SF G  AE   D ++  + +    SE  +     S+F + +   P  + N+  ++ +  +
Sbjct:    72 SFNG--AEDKPDNDLDHSQNHWGLSE--NYSCTSSQFADES---PNSSINICSEEKSSIS 124

Query:   229 PRNVVFKGRKSLLRTPTKLASSVAYPFAFIKPCGIHGDVTLNDINQRIHSPGSK-TKQNI 287
              RN       +  +        V YPF  +KP G   D+TLNDIN+RI  P ++  +  +
Sbjct:   125 SRNSFEPSSSTSKKNDYDEKKRVVYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPV 184

Query:   288 DDPSAYP-TSA----FSGKPVVGKTKIHTEGGKGSITIMRTKG 325
              D +  P  SA     SGK VV  TKI T G +G+ITI+RTKG
Sbjct:   185 GDFACRPCVSADGPGLSGKAVVAFTKIQTLG-RGTITIIRTKG 226


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.129   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      325       325   0.00087  116 3  11 23  0.46    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  243 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.11u 0.14s 31.25t   Elapsed:  00:00:01
  Total cpu time:  31.11u 0.14s 31.25t   Elapsed:  00:00:01
  Start:  Tue May 21 05:02:41 2013   End:  Tue May 21 05:02:42 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NLW5	XRI1_ARATH	No assigned EC number	0.5302	0.8892	0.9633	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00011760001 SubName- Full=Chromosome undetermined scaffold_336, whole genome shotgun sequence; (313 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00