Citrus Sinensis ID: 020630
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 323 | 2.2.26 [Sep-21-2011] | |||||||
| O35678 | 303 | Monoglyceride lipase OS=M | yes | no | 0.792 | 0.844 | 0.270 | 9e-22 | |
| Q8R431 | 303 | Monoglyceride lipase OS=R | yes | no | 0.795 | 0.848 | 0.275 | 1e-21 | |
| Q99685 | 303 | Monoglyceride lipase OS=H | yes | no | 0.900 | 0.960 | 0.269 | 2e-21 | |
| Q55EQ3 | 937 | Uncharacterized abhydrola | no | no | 0.764 | 0.263 | 0.294 | 2e-18 | |
| P28321 | 313 | Monoglyceride lipase OS=S | yes | no | 0.823 | 0.849 | 0.267 | 1e-16 | |
| O94305 | 378 | Putative monoglyceride li | yes | no | 0.724 | 0.619 | 0.256 | 4e-08 | |
| O34705 | 259 | Phospholipase YtpA OS=Bac | yes | no | 0.752 | 0.938 | 0.221 | 0.0004 |
| >sp|O35678|MGLL_MOUSE Monoglyceride lipase OS=Mus musculus GN=Mgll PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA ++++HG G G + ++ VFA D +GHG+S+G R + D +
Sbjct: 42 KALIFVSHGAGEHCGR-YDELAHMLKGLDMLVFAHDHVGHGQSEGERMVVSDFQVFVRDV 100
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
L ++ + Y D+P FL G SMGGA ++L+ + P ++G++ +PL V+
Sbjct: 101 LQHVDTIQ--KDYPDVPIFLLGHSMGGAISILVAAE-RPTYFSGMVLISPL-VLANPESA 156
Query: 175 SKLHLFMYGLL-FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233
S L + LL F L + D+ ++ + + ++ + S+P +V ++
Sbjct: 157 STLKVLAAKLLNFVLPNMTLGRIDSSVLSR---NKSEVDLYNSDPLVCRAGLKVCFGIQL 213
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
++ ++T+PFL + G+AD + + LL E + S DK++K+Y+G YH L +
Sbjct: 214 LNAVARVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESSRSQDKTLKMYEGAYHVLHR 273
Query: 294 GEPDENANLVLKDMREWIDERVERCG 319
P E N VL ++ W+ R+ G
Sbjct: 274 ELP-EVTNSVLHEVNSWVSHRIAAAG 298
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Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain. Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Mus musculus (taxid: 10090) EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|Q8R431|MGLL_RAT Monoglyceride lipase OS=Rattus norvegicus GN=Mgll PE=1 SV=1 | Back alignment and function description |
|---|
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 12/269 (4%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA ++++HG G G + ++ VFA D +GHG+S+G R + D +
Sbjct: 42 KALIFVSHGAGEHCGR-YDELAQMLKRLDMLVFAHDHVGHGQSEGERMVVSDFQVFVRDL 100
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-PENMK 173
L V+ + Y ++P FL G SMGGA ++L + P ++G+I +PL + PE+
Sbjct: 101 LQHVNTVQ--KDYPEVPVFLLGHSMGGAISILAAAE-RPTHFSGMILISPLILANPESA- 156
Query: 174 PSKLHLFMYGLL-FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
S L + LL F L + D+ ++ + + ++ + S+P +V +
Sbjct: 157 -STLKVLAAKLLNFVLPNISLGRIDSSVLSR---NKSEVDLYNSDPLICHAGVKVCFGIQ 212
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ ++ ++T+PFL + G+AD + + LL E + S DK++K+Y+G YH L
Sbjct: 213 LLNAVSRVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESSPSQDKTLKMYEGAYHVLH 272
Query: 293 QGEPDENANLVLKDMREWIDERVERCGPK 321
+ P E N VL ++ W+ R+ G +
Sbjct: 273 KELP-EVTNSVLHEINTWVSHRIAVAGAR 300
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Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain. Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q99685|MGLL_HUMAN Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 35/326 (10%)
Query: 1 MPQETQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYM 60
MP+E+ P P Y + G +Y LF + + P KA +++
Sbjct: 1 MPEESSPRRTPQSIPYQDLPHLVNADG-----QY-------LFCRYWKPTGTP-KALIFV 47
Query: 61 THGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
+HG G +G ++++ VFA D +GHG+S+G R + D L
Sbjct: 48 SHGAGEHSGR-YEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDS 106
Query: 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-PENMKPSK--- 176
++ + Y LP FL G SMGGA +L + P + G++ +PL + PE+ K
Sbjct: 107 MQ--KDYPGLPVFLLGHSMGGAIAILTAAE-RPGHFAGMVLISPLVLANPESATTFKVLA 163
Query: 177 ---LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233
L+L + L G D+ + + NK ++ + S+P +V ++
Sbjct: 164 AKVLNLVLPNLSLGPIDS-SVLSRNK---------TEVDIYNSDPLICRAGLKVCFGIQL 213
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
++ K+TVPFL + G+AD + + LL E A S DK++KIY+G YH L +
Sbjct: 214 LNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK 273
Query: 294 GEPDENANLVLKDMREWIDERVERCG 319
P E N V ++ W+ +R G
Sbjct: 274 ELP-EVTNSVFHEINMWVSQRTATAG 298
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Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain (By similarity). Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q55EQ3|Y9086_DICDI Uncharacterized abhydrolase domain-containing protein DDB_G0269086 OS=Dictyostelium discoideum GN=DDB_G0269086 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 28/275 (10%)
Query: 53 KVK--ATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110
KVK ATV M HG G +G ++ + +A G V A D GHG S G+R + +E+
Sbjct: 24 KVKPIATVTMIHGLGEHSG-RYEHVFSRFAEQGIKVNAFDQRGHGISSGVRGHSPSLEQ- 81
Query: 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170
SL + + S D+P F++G S GG + + + + G I ++PL I
Sbjct: 82 ---SLKDIQLIA-STAETDVPHFIYGHSFGGCLALHYNLKKKDHHPAGCIVTSPL--IKP 135
Query: 171 NMKPSKLHLFMYGLLFGLADTW--AAMPDNKMVGK--AIKDPEKLKVIASNPRRYTGKPR 226
+K S + L M LL GL +W + D ++ K A+ + K + N K
Sbjct: 136 AIKVSGVKLSMGNLLGGLMPSWTISNSIDPTLISKDSAVVNEYKQDKLVHN------KIS 189
Query: 227 VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA-SSADKSIKIYD 285
+G + + + + + D + P L VH D +TCP +S+ Y++ S+ DK++K+++
Sbjct: 190 LGMAKWMLQRSEQLIDLAPQFDTPLLLVHANDDKITCPKASQQFYDRVPSTVDKTLKLWE 249
Query: 286 GMYHSLIQGE--PDENANLVLKDMREWIDERVERC 318
MYH + E +E +L EWI ER+E
Sbjct: 250 NMYHE-VHNEFAKEEFVTYIL----EWIKERIENA 279
|
Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|P28321|MGLL_YEAST Monoglyceride lipase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJU3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 136/329 (41%), Gaps = 63/329 (19%)
Query: 17 MPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC 76
+PE +Y G + G ++ NG +V+ V + HG+G T F ++
Sbjct: 12 VPELQYENFDGAKFGYMFWPVQNGT----------NEVRGRVLLIHGFGEYTKIQF-RLM 60
Query: 77 ISYATWGYAVFAADLLGHG-----RSDGIR---CYLGDMEKVAASSLSFFKHVRHSEPYR 128
+ GY F D G G RS G+ D+E +LS K +
Sbjct: 61 DHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECK-------AK 113
Query: 129 DLPAFLFGESMGGAATMLMYFQSE-PNTWTGLIFSAPLFVI-PENM--KPSKLHLFMYGL 184
+P F++G SMGG + Q + N +G I S PL ++ P M KP+++
Sbjct: 114 GIPLFMWGHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQI------- 166
Query: 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNP--RRYTGK-----PRVGTMREIARVC 237
+A A + + LK I S+ R + G P G+ R+I
Sbjct: 167 ---IAPLLAKFLPRVRIDTGLD----LKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFM 219
Query: 238 Q-----------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286
Q YIQ NF+K P + +HG D + P S+ + SADK +K+Y G
Sbjct: 220 QRGAKLYKNENNYIQKNFAK-DKPVIIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPG 278
Query: 287 MYHSLIQGEPDENANLVLKDMREWIDERV 315
HS+ E D+ N V DM++W+D+
Sbjct: 279 ARHSIFSLETDKVFNTVFNDMKQWLDKHT 307
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Converts monoacylglycerides (MAG) to free fatty acids and glycerol. Required for efficient degradation of MAG, short-lived intermediates of glycerolipid metabolism which may also function as lipid signaling molecules. Controls inactivation of the signaling lipid N-palmitoylethanolamine (PEA). Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|O94305|MGLL_SCHPO Putative monoglyceride lipase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC5E4.05c PE=1 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADL--LGHGRSDG 99
L+T+ + + K A V HG+G + + + V+ D GH R G
Sbjct: 4 LYTKDWTDVKDKPVARVVFIHGFGEHVN-AYPEFFEALNERNIEVYTFDQRGFGHSRKGG 62
Query: 100 IR---CYLGDMEKVAASSLSF----FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ-S 151
+ C G SL F ++ +R S+ +LP FL+G SMGG + +
Sbjct: 63 PKKQGCTGG-------WSLVFPDLDYQILRASD--TELPLFLWGHSMGGGLALRYGISGT 113
Query: 152 EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211
+ G+I AP+ + +P+ L L+ + + + D+ + + I E +
Sbjct: 114 HRHKLAGVIAQAPMLRCHPDTEPNFLLRKALTLVSKVHPNF--LFDSDVQSQHITRDEAV 171
Query: 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT----------VPFLTVHGTADGV 261
+R P V ++ + Q D ++ T +P L HGT D V
Sbjct: 172 N------QRLQDDPLVSSVGSL----QVFSDMLNRGTKTIELAPQFFLPLLITHGTDDNV 221
Query: 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSL-IQGEPD 297
TC SSK YE A + DK+ + Y G YHSL I+ +P+
Sbjct: 222 TCSDSSKEFYENAGTKDKTYQSYPGFYHSLHIEKKPE 258
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Converts monoacylglycerides (MAG) to free fatty acids and glycerol. Required for efficient degradation of MAG, short-lived intermediates of glycerolipid metabolism which may also function as lipid signaling molecules. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|O34705|PLBAC_BACSU Phospholipase YtpA OS=Bacillus subtilis (strain 168) GN=ytpA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 23/266 (8%)
Query: 56 ATVYMTHG---YGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112
A + + HG Y W+ + + + GY V DL G G + R ++ ++
Sbjct: 11 AVIVIIHGASEYHGRYKWLIEM----WRSSGYHVVMGDLPGQGTTTRARGHIRSFQEYID 66
Query: 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172
++ R DLP FL G SMGG + Q TG+I S+P + +
Sbjct: 67 EVDAWIDKARTF----DLPVFLLGHSMGGLVAIEWVKQQRNPRITGIILSSPCLGLQIKV 122
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
+ L L GL + + + A ++ + ++ N Y K V RE
Sbjct: 123 NKA-LDLASKGL--NVIAPSLKVDSGLSIDMATRNEDVIEA-DQNDSLYVRKVSVRWYRE 178
Query: 233 IARVCQYIQ---DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289
+ + + + F K VP L + D + T + +S +K+ + ++G+YH
Sbjct: 179 LLKTIESAMVPTEAFLK--VPLLVMQAGDDKLVDKTMVIKWFNGVASHNKAYREWEGLYH 236
Query: 290 SLIQGEPDENANLVLKDMREWIDERV 315
+ EP+ V K R + D+ +
Sbjct: 237 EIFN-EPERED--VFKAARAFTDQYI 259
|
Phospholipase involved in the biosynthesis of the antibiotic bacilysocin. It probably catalyzes the hydrolysis of the 2-sn-acyl moiety of phosphatidylglycerol to produce bacilysocin (lysophosphatidylglycerol). Is also able to catalyze the hydrolysis reaction of one acyl bond in phosphatidylcholine in vitro (actual cleavage point is unknown), resulting in lysophosphatidylcholine. Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 323 | ||||||
| 224070855 | 326 | predicted protein [Populus trichocarpa] | 0.987 | 0.978 | 0.875 | 1e-169 | |
| 224054154 | 326 | predicted protein [Populus trichocarpa] | 0.993 | 0.984 | 0.872 | 1e-168 | |
| 225442797 | 392 | PREDICTED: monoglyceride lipase-like [Vi | 0.978 | 0.806 | 0.870 | 1e-166 | |
| 147780502 | 321 | hypothetical protein VITISV_001366 [Viti | 0.978 | 0.984 | 0.867 | 1e-165 | |
| 357479505 | 326 | Monoglyceride lipase [Medicago truncatul | 0.996 | 0.987 | 0.816 | 1e-162 | |
| 356548571 | 326 | PREDICTED: monoglyceride lipase-like [Gl | 0.978 | 0.969 | 0.815 | 1e-159 | |
| 297847666 | 329 | esterase/lipase/thioesterase family prot | 0.965 | 0.948 | 0.833 | 1e-159 | |
| 15219082 | 332 | lysophospholipase 2 [Arabidopsis thalian | 0.965 | 0.939 | 0.830 | 1e-159 | |
| 326910820 | 321 | monoacylglycerol acyltransferase [Arachi | 0.962 | 0.968 | 0.831 | 1e-158 | |
| 449519338 | 325 | PREDICTED: monoglyceride lipase-like [Cu | 0.962 | 0.956 | 0.817 | 1e-154 |
| >gi|224070855|ref|XP_002303266.1| predicted protein [Populus trichocarpa] gi|222840698|gb|EEE78245.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/320 (87%), Positives = 304/320 (95%), Gaps = 1/320 (0%)
Query: 1 MPQETQ-PETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVY 59
MP E Q PE PPN+WG MPEEEYY SQGV N + +FETPNGK+FTQ FLPLD+KVKATVY
Sbjct: 1 MPSEAQQPEAPPNFWGDMPEEEYYASQGVTNTQSHFETPNGKVFTQGFLPLDKKVKATVY 60
Query: 60 MTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
MTHGYGSDTGW+FQKICI++ATWGYAVFAADLLGHGRSDG+RCY+GDMEK+AA+S+SFFK
Sbjct: 61 MTHGYGSDTGWLFQKICINFATWGYAVFAADLLGHGRSDGLRCYMGDMEKIAAASVSFFK 120
Query: 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179
HVR+SEPY++LPAFLFGESMGG ATMLMYFQSEP+TWTG+IFSAPLFVIPE MKPSK HL
Sbjct: 121 HVRYSEPYKNLPAFLFGESMGGLATMLMYFQSEPDTWTGVIFSAPLFVIPEPMKPSKAHL 180
Query: 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY 239
FMYGLLFG ADTWAAMPDNKMVGKAIKDPEKLK+IASNPRRYTGKPRVGTMREIARVCQY
Sbjct: 181 FMYGLLFGFADTWAAMPDNKMVGKAIKDPEKLKIIASNPRRYTGKPRVGTMREIARVCQY 240
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
IQDNFSKVTVPFLTVHGTADGVTCPTSS+LLYEKASS DKS+K+Y+GMYHSLIQGEPDEN
Sbjct: 241 IQDNFSKVTVPFLTVHGTADGVTCPTSSQLLYEKASSEDKSLKMYEGMYHSLIQGEPDEN 300
Query: 300 ANLVLKDMREWIDERVERCG 319
A+LVLKDMREWIDERVER G
Sbjct: 301 ASLVLKDMREWIDERVERYG 320
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224054154|ref|XP_002298118.1| predicted protein [Populus trichocarpa] gi|222845376|gb|EEE82923.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/322 (87%), Positives = 299/322 (92%), Gaps = 1/322 (0%)
Query: 1 MPQETQ-PETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVY 59
M ETQ PETPPN+WG MPEEEYY SQGV + YFETPNGKLFTQ FLPLD+KVKATVY
Sbjct: 1 MSSETQQPETPPNFWGDMPEEEYYASQGVTTTQSYFETPNGKLFTQGFLPLDKKVKATVY 60
Query: 60 MTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
MTHGYGSDTGW+FQKICIS+A WGYAVFAADLLGHGRSDGIRCY+GDM+K+AA+SLSFFK
Sbjct: 61 MTHGYGSDTGWLFQKICISFANWGYAVFAADLLGHGRSDGIRCYMGDMDKIAATSLSFFK 120
Query: 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179
H R SEPY+ LPAFLFGESMGG TMLMYFQSEPN WTGLIFSAPLFVIPE MKPSK+HL
Sbjct: 121 HERFSEPYKGLPAFLFGESMGGLTTMLMYFQSEPNMWTGLIFSAPLFVIPEAMKPSKVHL 180
Query: 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY 239
FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK+IASNPRRYTGKPRVGTMREIAR+CQY
Sbjct: 181 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKIIASNPRRYTGKPRVGTMREIARMCQY 240
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
IQDNFSKVT PFLTVHGTADGVTCPTSS+LL+EKASS DKS+K+Y+GMYHSLIQGEPDEN
Sbjct: 241 IQDNFSKVTAPFLTVHGTADGVTCPTSSQLLFEKASSEDKSLKMYEGMYHSLIQGEPDEN 300
Query: 300 ANLVLKDMREWIDERVERCGPK 321
ANLVLKDMR WIDERVER G K
Sbjct: 301 ANLVLKDMRGWIDERVERYGSK 322
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442797|ref|XP_002285258.1| PREDICTED: monoglyceride lipase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust.
Identities = 275/316 (87%), Positives = 294/316 (93%)
Query: 5 TQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGY 64
++ E N+WG MPEEEYY SQGVRN K YF+TPNGKLFTQSFLPLD VKA+VYMTHGY
Sbjct: 74 SESEISANFWGDMPEEEYYASQGVRNTKSYFDTPNGKLFTQSFLPLDLPVKASVYMTHGY 133
Query: 65 GSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS 124
GSDTGW+FQKICI+YATWGYAVFAAD+LGHGRSDGIRCYLGDMEKVAA+SLSFFK VR S
Sbjct: 134 GSDTGWLFQKICINYATWGYAVFAADILGHGRSDGIRCYLGDMEKVAATSLSFFKSVRTS 193
Query: 125 EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184
E YRDLPAFLFGESMGGA TML+YFQSEP WTGLIFSAPLFV+PENMKPSK+ LF+YGL
Sbjct: 194 ESYRDLPAFLFGESMGGATTMLVYFQSEPELWTGLIFSAPLFVMPENMKPSKVRLFLYGL 253
Query: 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF 244
LFG+ADTWA MPDNKMVGKAIKDPEKLKVIASNPRRYTG PRVGTMRE+ARVCQYIQDNF
Sbjct: 254 LFGMADTWATMPDNKMVGKAIKDPEKLKVIASNPRRYTGPPRVGTMRELARVCQYIQDNF 313
Query: 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304
SKVT PFLTVHGTADGVTCPTSSKLLYEKASS DK++K+Y+GMYHSLIQGEPDENANLVL
Sbjct: 314 SKVTAPFLTVHGTADGVTCPTSSKLLYEKASSEDKALKLYEGMYHSLIQGEPDENANLVL 373
Query: 305 KDMREWIDERVERCGP 320
KDMREWIDERVER GP
Sbjct: 374 KDMREWIDERVERYGP 389
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147780502|emb|CAN62561.1| hypothetical protein VITISV_001366 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/316 (86%), Positives = 293/316 (92%)
Query: 5 TQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGY 64
++ E N+WG MPEEEYY SQGVRN K YF+TPNGKLFTQSFLPLD VKA+VYMTHGY
Sbjct: 3 SESEISANFWGDMPEEEYYASQGVRNTKSYFDTPNGKLFTQSFLPLDLPVKASVYMTHGY 62
Query: 65 GSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS 124
GSDTGW+FQKICI+YATWGYAVFAAD+LGHGRSDGIRCYLGDMEKVAA+SLSFFK VR S
Sbjct: 63 GSDTGWLFQKICINYATWGYAVFAADILGHGRSDGIRCYLGDMEKVAATSLSFFKSVRTS 122
Query: 125 EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184
E YRDLPAFLFGESMGGA TML+YFQSEP WTGLIFSAPLFV+PENMKPSK+ LF+YGL
Sbjct: 123 ESYRDLPAFLFGESMGGATTMLVYFQSEPELWTGLIFSAPLFVMPENMKPSKVRLFLYGL 182
Query: 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF 244
LFG+ADTWA MPDNKMVGKAIKDPEKLKVIASNPRRYTG PRVGTMRE+ARVCQYIQDNF
Sbjct: 183 LFGMADTWATMPDNKMVGKAIKDPEKLKVIASNPRRYTGPPRVGTMRELARVCQYIQDNF 242
Query: 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304
SKVT PFLTVHGTADGVTCPTSSKLLYEKASS DK++K+Y+GMYHSLIQGEPDEN NLVL
Sbjct: 243 SKVTAPFLTVHGTADGVTCPTSSKLLYEKASSEDKALKLYEGMYHSLIQGEPDENXNLVL 302
Query: 305 KDMREWIDERVERCGP 320
KDMREWIDERVER GP
Sbjct: 303 KDMREWIDERVERYGP 318
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357479505|ref|XP_003610038.1| Monoglyceride lipase [Medicago truncatula] gi|355511093|gb|AES92235.1| Monoglyceride lipase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust.
Identities = 263/322 (81%), Positives = 294/322 (91%)
Query: 1 MPQETQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYM 60
M + + E PPN+WG+ PEEEYYTSQGVRN K +FETPNGK+FTQSFLPL+ ++KATVYM
Sbjct: 1 MATQQESEIPPNFWGHTPEEEYYTSQGVRNTKSHFETPNGKIFTQSFLPLNAEIKATVYM 60
Query: 61 THGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
THGYGSDTGW+FQKICI+YATWGYAVF ADLLGHGRSDG+RCYLGDM+K+AA+SLSFF H
Sbjct: 61 THGYGSDTGWLFQKICITYATWGYAVFTADLLGHGRSDGLRCYLGDMDKIAATSLSFFLH 120
Query: 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180
VR S PY LPAFLFGESMGG AT+LMYFQSEP+TWTGLIFSAPLFVIPE+MKPSK+HLF
Sbjct: 121 VRRSPPYNHLPAFLFGESMGGLATLLMYFQSEPDTWTGLIFSAPLFVIPEDMKPSKIHLF 180
Query: 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240
+YGLLFGLADTWAAMPDNKMVGKAI+DP KLK+IASNPRRYTG PRVGTMRE+ RV QY+
Sbjct: 181 VYGLLFGLADTWAAMPDNKMVGKAIRDPNKLKIIASNPRRYTGPPRVGTMRELLRVTQYV 240
Query: 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300
QDNF VTVPFLT HGTADGVTCP+SSKLLYEKA S DK++K+Y+GMYHSLIQGEPDE+A
Sbjct: 241 QDNFCNVTVPFLTAHGTADGVTCPSSSKLLYEKAESKDKTLKLYEGMYHSLIQGEPDESA 300
Query: 301 NLVLKDMREWIDERVERCGPKN 322
NLVL+DMREWIDERV R GP N
Sbjct: 301 NLVLRDMREWIDERVRRYGPNN 322
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356548571|ref|XP_003542674.1| PREDICTED: monoglyceride lipase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/319 (81%), Positives = 295/319 (92%), Gaps = 3/319 (0%)
Query: 6 QPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLD---QKVKATVYMTH 62
+ E PPN+WG+ PEEEYYTSQGVRN K +FETPNGK+FTQSFLPL+ +VKATV+MTH
Sbjct: 4 ESEAPPNFWGHTPEEEYYTSQGVRNTKSHFETPNGKIFTQSFLPLNLQPHQVKATVFMTH 63
Query: 63 GYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVR 122
GYGSDTGW+FQKICI++ATWGYAVFAADLLGHGRSDG++CYLGDM+K+AA+SLSFF HVR
Sbjct: 64 GYGSDTGWLFQKICINFATWGYAVFAADLLGHGRSDGLQCYLGDMDKIAATSLSFFLHVR 123
Query: 123 HSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182
+S PY++LPAFLFGESMGG AT+LMYF+SEP+TWTGL+FSAPLFVIPE+MKPS++HLFMY
Sbjct: 124 NSHPYKNLPAFLFGESMGGLATLLMYFKSEPDTWTGLMFSAPLFVIPEDMKPSRVHLFMY 183
Query: 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD 242
GLLFGLADTWAAMPDNKMVGKAI+DPEKLKVIASNPRRYTG PRVGTMRE+ RV QY+QD
Sbjct: 184 GLLFGLADTWAAMPDNKMVGKAIRDPEKLKVIASNPRRYTGPPRVGTMRELLRVTQYVQD 243
Query: 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANL 302
NFSKVT PF T HGT+DGVTCP+SSKLLYEK SS DK++K+YDGMYHSLIQGEPDE+ANL
Sbjct: 244 NFSKVTTPFFTAHGTSDGVTCPSSSKLLYEKGSSEDKTLKLYDGMYHSLIQGEPDESANL 303
Query: 303 VLKDMREWIDERVERCGPK 321
VL DMREWIDERV R GP
Sbjct: 304 VLGDMREWIDERVRRYGPN 322
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297847666|ref|XP_002891714.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337556|gb|EFH67973.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/312 (83%), Positives = 288/312 (92%)
Query: 12 NYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM 71
N+WG MPEEEYYTSQGVRN K YFETPNGKLFTQSFLPLD ++K TVYM+HGYGSDT WM
Sbjct: 18 NFWGNMPEEEYYTSQGVRNTKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGSDTSWM 77
Query: 72 FQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131
FQKIC+S++TWGYAVFAADLLGHGRSDGIRCY+GDMEKVAA+SL+FFKHVR S+PY+DLP
Sbjct: 78 FQKICMSFSTWGYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDPYKDLP 137
Query: 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191
AFLFGESMGG T+LMYFQSE +TWTGL+FSAPLFVIPE+MKPSK HLF YGLLFGLADT
Sbjct: 138 AFLFGESMGGLVTLLMYFQSEADTWTGLMFSAPLFVIPEDMKPSKAHLFAYGLLFGLADT 197
Query: 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251
WAAMPDNKMVGKAIKDPEKLK+IASNP+RYTGKPRVGTMRE+ R QY+Q+NF +VT+P
Sbjct: 198 WAAMPDNKMVGKAIKDPEKLKIIASNPQRYTGKPRVGTMRELLRKTQYVQENFGRVTIPV 257
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
T HGTADGVTCPTSSKLLYEKASSADK++KIY+GMYHSLIQGEPDENA +VLKDMREWI
Sbjct: 258 FTAHGTADGVTCPTSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLKDMREWI 317
Query: 312 DERVERCGPKNC 323
DERV+R G K
Sbjct: 318 DERVKRYGSKTV 329
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219082|ref|NP_175685.1| lysophospholipase 2 [Arabidopsis thaliana] gi|12324637|gb|AAG52273.1|AC019018_10 putative lipase; 20450-21648 [Arabidopsis thaliana] gi|15450994|gb|AAK96768.1| putative lipase [Arabidopsis thaliana] gi|30984558|gb|AAP42742.1| At1g52760 [Arabidopsis thaliana] gi|332194728|gb|AEE32849.1| lysophospholipase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 259/312 (83%), Positives = 288/312 (92%)
Query: 12 NYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM 71
N+WG MPEEEYYTSQGVRN K YFETPNGKLFTQSFLPLD ++K TVYM+HGYGSDT WM
Sbjct: 21 NFWGTMPEEEYYTSQGVRNSKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGSDTSWM 80
Query: 72 FQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131
FQKIC+S+++WGYAVFAADLLGHGRSDGIRCY+GDMEKVAA+SL+FFKHVR S+PY+DLP
Sbjct: 81 FQKICMSFSSWGYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDPYKDLP 140
Query: 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191
AFLFGESMGG T+LMYFQSEP TWTGL+FSAPLFVIPE+MKPSK HLF YGLLFGLADT
Sbjct: 141 AFLFGESMGGLVTLLMYFQSEPETWTGLMFSAPLFVIPEDMKPSKAHLFAYGLLFGLADT 200
Query: 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251
WAAMPDNKMVGKAIKDPEKLK+IASNP+RYTGKPRVGTMRE+ R QY+Q+NF KVT+P
Sbjct: 201 WAAMPDNKMVGKAIKDPEKLKIIASNPQRYTGKPRVGTMRELLRKTQYVQENFGKVTIPV 260
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
T HGTADGVTCPTSSKLLYEKASSADK++KIY+GMYHSLIQGEPDENA +VLKDMREWI
Sbjct: 261 FTAHGTADGVTCPTSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLKDMREWI 320
Query: 312 DERVERCGPKNC 323
DE+V++ G K
Sbjct: 321 DEKVKKYGSKTA 332
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326910820|gb|AEA11209.1| monoacylglycerol acyltransferase [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/314 (83%), Positives = 294/314 (93%), Gaps = 3/314 (0%)
Query: 11 PNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSD 67
PN+WG+MPEEEYYTSQGVRN K +F+TP+GK+FTQSFLPLD +VKATV+MTHGYGSD
Sbjct: 8 PNFWGHMPEEEYYTSQGVRNTKSFFDTPHGKIFTQSFLPLDLQPNEVKATVFMTHGYGSD 67
Query: 68 TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPY 127
TGW+FQKICI++ATWGYAVFAADLLGHGRSDG+RCYLGDM+KVA++SLSFF HVR SEPY
Sbjct: 68 TGWLFQKICINFATWGYAVFAADLLGHGRSDGLRCYLGDMDKVASASLSFFLHVRRSEPY 127
Query: 128 RDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187
+DLPAFLFGESMGG AT+LMYF+SEP+TWTGL+FSAPLFVIPE+MKPS+LHLF YGLLFG
Sbjct: 128 KDLPAFLFGESMGGLATLLMYFKSEPDTWTGLMFSAPLFVIPEDMKPSRLHLFAYGLLFG 187
Query: 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247
ADTWAAMPDNKMVGKAI+DPEKLK+IASNPRRYTG PRVGTMRE+ RV QY+QDNFSKV
Sbjct: 188 WADTWAAMPDNKMVGKAIRDPEKLKIIASNPRRYTGPPRVGTMRELLRVTQYVQDNFSKV 247
Query: 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDM 307
T PFLTVHGT+DGVTCP+SSKLLYEKASS DKS+K+Y+GMYHSLIQGEPDE+ANLVL DM
Sbjct: 248 TAPFLTVHGTSDGVTCPSSSKLLYEKASSEDKSLKLYEGMYHSLIQGEPDESANLVLSDM 307
Query: 308 REWIDERVERCGPK 321
REWID+RV R G K
Sbjct: 308 REWIDQRVHRYGNK 321
|
Source: Arachis hypogaea Species: Arachis hypogaea Genus: Arachis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449519338|ref|XP_004166692.1| PREDICTED: monoglyceride lipase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/312 (81%), Positives = 284/312 (91%), Gaps = 1/312 (0%)
Query: 12 NYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLD-QKVKATVYMTHGYGSDTGW 70
N+WG PEEE+Y SQGVRN K +FET +GKLFTQSF+PLD +K TVYMTHGYGSDTGW
Sbjct: 14 NFWGDQPEEEFYASQGVRNTKSFFETSHGKLFTQSFIPLDFPDLKGTVYMTHGYGSDTGW 73
Query: 71 MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130
MFQKIC+SYA+WGYAVFAADLLGHGRSDG+RCYLGDM+K+AA+SLSFF H R SEPYR L
Sbjct: 74 MFQKICLSYASWGYAVFAADLLGHGRSDGLRCYLGDMDKIAAASLSFFLHTRRSEPYRHL 133
Query: 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190
PAFLFGESMG AATMLMY QS+P+TWTGLIFSAPLFVIPENMKPSKL LF+YGLLFG+AD
Sbjct: 134 PAFLFGESMGCAATMLMYLQSDPDTWTGLIFSAPLFVIPENMKPSKLRLFLYGLLFGVAD 193
Query: 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250
TWAAMPDNKMVGKAIKDPEKLK+IA+NPRRYTG PRVGTMRE+ RV QYI+DNFS+VT P
Sbjct: 194 TWAAMPDNKMVGKAIKDPEKLKIIAANPRRYTGPPRVGTMRELVRVTQYIRDNFSRVTAP 253
Query: 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310
FLTVHGTADGVTCP+SS+LLYEKA+S DK++K+YDGMYHSLIQGEPDEN +VL+DMREW
Sbjct: 254 FLTVHGTADGVTCPSSSELLYEKATSVDKTLKLYDGMYHSLIQGEPDENVEIVLRDMREW 313
Query: 311 IDERVERCGPKN 322
IDER R GPK
Sbjct: 314 IDERALRYGPKK 325
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 323 | ||||||
| TAIR|locus:2011511 | 332 | LysoPL2 "lysophospholipase 2" | 0.975 | 0.948 | 0.831 | 6.9e-150 | |
| TAIR|locus:2197369 | 324 | AT1G11090 [Arabidopsis thalian | 0.962 | 0.959 | 0.410 | 2.2e-66 | |
| TAIR|locus:2081710 | 348 | AT3G62860 "AT3G62860" [Arabido | 0.869 | 0.807 | 0.366 | 3.6e-50 | |
| TAIR|locus:2147790 | 327 | AT5G14980 "AT5G14980" [Arabido | 0.931 | 0.920 | 0.363 | 9.5e-50 | |
| TAIR|locus:2043278 | 351 | AT2G47630 "AT2G47630" [Arabido | 0.873 | 0.803 | 0.375 | 4.1e-49 | |
| TAIR|locus:2100606 | 319 | AT3G55190 "AT3G55190" [Arabido | 0.869 | 0.880 | 0.364 | 7.7e-48 | |
| TAIR|locus:2039677 | 317 | AT2G39420 "AT2G39420" [Arabido | 0.897 | 0.914 | 0.335 | 1.4e-46 | |
| TAIR|locus:2150245 | 330 | AT5G19290 "AT5G19290" [Arabido | 0.934 | 0.915 | 0.344 | 7.1e-45 | |
| TAIR|locus:2181392 | 369 | AT5G16120 [Arabidopsis thalian | 0.873 | 0.764 | 0.345 | 8.1e-44 | |
| TAIR|locus:2039822 | 317 | AT2G39410 [Arabidopsis thalian | 0.894 | 0.911 | 0.316 | 2.2e-43 |
| TAIR|locus:2011511 LysoPL2 "lysophospholipase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 262/315 (83%), Positives = 291/315 (92%)
Query: 7 PETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS 66
P PPN+WG MPEEEYYTSQGVRN K YFETPNGKLFTQSFLPLD ++K TVYM+HGYGS
Sbjct: 16 PPPPPNFWGTMPEEEYYTSQGVRNSKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGS 75
Query: 67 DTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEP 126
DT WMFQKIC+S+++WGYAVFAADLLGHGRSDGIRCY+GDMEKVAA+SL+FFKHVR S+P
Sbjct: 76 DTSWMFQKICMSFSSWGYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDP 135
Query: 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186
Y+DLPAFLFGESMGG T+LMYFQSEP TWTGL+FSAPLFVIPE+MKPSK HLF YGLLF
Sbjct: 136 YKDLPAFLFGESMGGLVTLLMYFQSEPETWTGLMFSAPLFVIPEDMKPSKAHLFAYGLLF 195
Query: 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK 246
GLADTWAAMPDNKMVGKAIKDPEKLK+IASNP+RYTGKPRVGTMRE+ R QY+Q+NF K
Sbjct: 196 GLADTWAAMPDNKMVGKAIKDPEKLKIIASNPQRYTGKPRVGTMRELLRKTQYVQENFGK 255
Query: 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKD 306
VT+P T HGTADGVTCPTSSKLLYEKASSADK++KIY+GMYHSLIQGEPDENA +VLKD
Sbjct: 256 VTIPVFTAHGTADGVTCPTSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLKD 315
Query: 307 MREWIDERVERCGPK 321
MREWIDE+V++ G K
Sbjct: 316 MREWIDEKVKKYGSK 330
|
|
| TAIR|locus:2197369 AT1G11090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 131/319 (41%), Positives = 195/319 (61%)
Query: 4 ETQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKV-KATVYMT 61
+ Q ET N+WG EE+Y+ +G+ K +F +P G LFT+S+LP + ++M
Sbjct: 3 DQQLETEINFWGETSEEDYFNLKGIIGSKSFFTSPRGLNLFTRSWLPSSSSPPRGLIFMV 62
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
HGYG+D W FQ I A G+A FA D+ GHGRSDG+R Y+ ++ V +SFF +
Sbjct: 63 HGYGNDVSWTFQSTPIFLAQMGFACFALDIEGHGRSDGVRAYVPSVDLVVDDIISFFNSI 122
Query: 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS-KLHLF 180
+ + ++ LP FLFGESMGGA +L+ F ++P + G + AP+ I + ++P + F
Sbjct: 123 KQNPKFQGLPRFLFGESMGGAICLLIQF-ADPLGFDGAVLVAPMCKISDKVRPKWPVDQF 181
Query: 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240
+ ++ TWA +P ++ K+IK EK + NP RY KPR+GT+ E+ RV Y+
Sbjct: 182 LI-MISRFLPTWAIVPTEDLLEKSIKVEEKKPIAKRNPMRYNEKPRLGTVMELLRVTDYL 240
Query: 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300
V++PF+ VHG+AD VT P S+ LYE A S DK++KIYDGM HS++ GEPD+N
Sbjct: 241 GKKLKDVSIPFIIVHGSADAVTDPEVSRELYEHAKSKDKTLKIYDGMMHSMLFGEPDDNI 300
Query: 301 NLVLKDMREWIDERVERCG 319
+V KD+ W+++R CG
Sbjct: 301 EIVRKDIVSWLNDR---CG 316
|
|
| TAIR|locus:2081710 AT3G62860 "AT3G62860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 104/284 (36%), Positives = 158/284 (55%)
Query: 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAAD 90
+EY + +LF +LP +A V++ HGYG + ++ I A+ GYAVF D
Sbjct: 10 EEYIKNSRDVELFACRWLP-SSSPRALVFLCHGYGMECSSFMRECGIRLASAGYAVFGMD 68
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150
GHGRS G RCY+ + ++ + E Y++ FL+GESMGGA +L++ +
Sbjct: 69 YEGHGRSKGARCYIKKFSNIVNDCFDYYTSISAQEEYKEKGRFLYGESMGGAVALLLH-K 127
Query: 151 SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210
+P+ W G + AP+ I E +KP + + + + + W +P ++ A KDP K
Sbjct: 128 KDPSFWNGALLVAPMCKISEKVKPHPVVINLLTRVEDIIPKWKIVPTKDVIDAAFKDPVK 187
Query: 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
+ I +N Y KPR+ T E+ R ++D ++T+PF +HG AD VT P SK L
Sbjct: 188 REEIRNNKLIYQDKPRLKTALEMLRTSMDLEDTLHEITLPFFVLHGEADIVTDPEISKAL 247
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
+EKAS+ DK+IK+Y GM+H L GEPD N +LV D+ W+D R
Sbjct: 248 FEKASTRDKTIKLYPGMWHGLTSGEPDANVDLVFADIVNWLDAR 291
|
|
| TAIR|locus:2147790 AT5G14980 "AT5G14980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 111/305 (36%), Positives = 162/305 (53%)
Query: 14 WGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF 72
+G + E+Y+ V + Y P G KLFTQ + PL++ + + HG+ ++ W
Sbjct: 15 FGSLSAAEFYSRHSVTHSSAYVTNPTGLKLFTQWWTPLNRPPLGLIAVVHGFTGESSWFL 74
Query: 73 QKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132
Q + +A GY A D GHG SDG+ ++ ++ + +SFF R LPA
Sbjct: 75 QLTSVLFAKSGYLTCAIDHQGHGFSDGLTAHIPNINLIVDDCISFFDDFRKRHASSFLPA 134
Query: 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192
FL+ ES+GGA + + + + + W GLI S + I KP + L L TW
Sbjct: 135 FLYSESLGGAIALYITLRQK-HQWNGLILSGAMCSISHKFKPPWPLQHLLTLAATLIPTW 193
Query: 193 AAMPDN-KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251
+P + G + K+P K K+ +NP R GKPR T E+ RVC+ +Q+ F +V VP
Sbjct: 194 RVVPTRGSIAGVSFKEPWKRKLAYANPNRTVGKPRAATAYELVRVCEDLQNRFEEVEVPL 253
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
+ VHG D V P S + LY + SS DK+IKIY GM+H LI GE +EN +LV D+ +WI
Sbjct: 254 MIVHGRDDVVCDPASVEELYRRCSSRDKTIKIYPGMWHQLI-GESEENVDLVFGDVLDWI 312
Query: 312 DERVE 316
R E
Sbjct: 313 KTRSE 317
|
|
| TAIR|locus:2043278 AT2G47630 "AT2G47630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 107/285 (37%), Positives = 157/285 (55%)
Query: 32 KEYFETPNG-KLFTQSFLPLDQKV-KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAA 89
+EY G +LF ++P KA V++ HGYG + ++ I A+ GYAVF
Sbjct: 10 EEYVRNSRGVELFACRWIPSSSSSPKALVFLCHGYGMECSDSMKECGIRLASAGYAVFGM 69
Query: 90 DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF 149
D GHGRS G RCY+ V ++ + E Y D FL+GESMGGA T+L++
Sbjct: 70 DYEGHGRSMGSRCYIKKFANVVNDCYDYYTSICAQEEYMDKGRFLYGESMGGAVTLLLH- 128
Query: 150 QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
+ +P W G I AP+ I E +KP + + + + + W +P ++ A KD
Sbjct: 129 KKDPLFWNGAILVAPMCKISEKVKPHPIVINLLTRVEEIIPKWKIVPTKDVIDAAFKDLV 188
Query: 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
K + + +N Y KPR+ T E+ R ++D ++T+PF +HG AD VT P SK
Sbjct: 189 KREEVRNNKLIYQDKPRLKTALEMLRTSMNLEDTLHEITMPFFVLHGEADTVTDPEVSKA 248
Query: 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
LYEKAS+ DK++K+Y GM+H+L GEPD N +LV D+ W+D R
Sbjct: 249 LYEKASTRDKTLKLYPGMWHALTSGEPDCNVDLVFADIINWLDLR 293
|
|
| TAIR|locus:2100606 AT3G55190 "AT3G55190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 105/288 (36%), Positives = 164/288 (56%)
Query: 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAAD 90
+E+ E G +L T + P++Q+ +A ++ HGY D F+ I +A G+AV +
Sbjct: 12 EEFIENSRGMQLLTCKWFPVNQEPRALIFFCHGYAIDCSTTFKDIAPKFAKEGFAVHGIE 71
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150
GHGRS G+ Y+ + + + S F + FL GESMGGA +L++ +
Sbjct: 72 YEGHGRSSGLSVYIDNFDLLIDDVSSHFSKISEMGDNTKKKRFLMGESMGGAVVLLLH-R 130
Query: 151 SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM---PDNKMVGKAIKD 207
+P W G I AP+ I E MKPS++ + M ++ L +W ++ PD ++ AIK
Sbjct: 131 KKPEFWDGGILIAPMCKIAEEMKPSRMVISMINMVTNLIPSWKSIIHGPD--ILNSAIKL 188
Query: 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267
PEK I +NP Y G PR+ TM E+ R+ +++ ++VT+PF+ +HG D VT S
Sbjct: 189 PEKRHEIRTNPNCYNGWPRMKTMSELFRISLDLENRLNEVTMPFIVLHGEDDKVTDKGGS 248
Query: 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
KLLYE A S DK++K+Y M+HSL+ GEP EN+ +V D+ +W+ R+
Sbjct: 249 KLLYEVALSNDKTLKLYPEMWHSLLFGEPPENSEIVFNDIVQWMQTRI 296
|
|
| TAIR|locus:2039677 AT2G39420 "AT2G39420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 98/292 (33%), Positives = 159/292 (54%)
Query: 25 SQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWG 83
++ ++ + + + G KLFT ++P Q+ KA V++ HGY + G
Sbjct: 5 TENIKYEESFIKNTRGMKLFTCKWVPAKQEPKALVFICHGYAMECSITMNSTARRLVKAG 64
Query: 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAA 143
+AV+ D GHG+SDG+ Y+ + + + + + + E + FL GESMGGA
Sbjct: 65 FAVYGIDYEGHGKSDGLSAYVPNFDHLVDDVSTHYTSICEKEENKGKMRFLLGESMGGAV 124
Query: 144 TMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK 203
+L++ + +P W G + AP+ I E MKPS L + + L G+ +W +P ++
Sbjct: 125 LLLLH-RKKPQFWDGAVLVAPMCKIAEEMKPSPLVISILAKLSGVIPSWKIIPGQDIIET 183
Query: 204 AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263
A K PE K + NP Y G+PR+ T E+ RV ++ ++V++PF+ +HG D VT
Sbjct: 184 AFKQPEIRKQVRENPYCYKGRPRLKTAYELLRVSTDLEKRLNEVSLPFIVLHGEDDKVTD 243
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
S+ LYE ASS+DK+ K+Y GM+H L+ GE EN V D+ W+D++V
Sbjct: 244 KAVSRQLYEVASSSDKTFKLYPGMWHGLLYGETPENIETVFADIIGWLDKKV 295
|
|
| TAIR|locus:2150245 AT5G19290 "AT5G19290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 107/311 (34%), Positives = 161/311 (51%)
Query: 12 NYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTG 69
N +G + +E+Y V + + P G KLFTQ + PL K + + HG+ ++
Sbjct: 13 NPFGSLTADEFYAKHSVSHSSAFITNPRGLKLFTQWWSPLPPTKPIGIIAVVHGFTGESS 72
Query: 70 WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRD 129
W Q I +A G+ A D GHG SDG+ ++ D+ V +SFF R + D
Sbjct: 73 WFLQLTSILFAKSGFITCAIDHQGHGFSDGLIAHIPDINPVVDDCISFFDDFRSRQTPSD 132
Query: 130 LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS-KLHLFMYGLLFGL 188
LP FL+ ES+GGA + + + W GLI + + I + KP L ++ ++ L
Sbjct: 133 LPCFLYSESLGGAIALYISLRQR-GVWDGLILNGAMCGISDKFKPPWPLEHLLF-VVANL 190
Query: 189 ADTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247
TW +P + + K+P K K+ ++PRR KPR T E+ RVC+ +Q F +V
Sbjct: 191 IPTWRVIPTRGSIPDVSFKEPWKRKLAMASPRRTVAKPRAATAYELIRVCKDLQGRFEEV 250
Query: 248 TVPFLTVHGTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKD 306
VP L VHG D V C + + L+ +A S DK+IKIY ++H +I GE +E +LV D
Sbjct: 251 EVPLLIVHGGGD-VVCDVACVEELHRRAISEDKTIKIYPELWHQMI-GESEEKVDLVYGD 308
Query: 307 MREWIDERVER 317
M W+ R ER
Sbjct: 309 MLSWLKSRAER 319
|
|
| TAIR|locus:2181392 AT5G16120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 101/292 (34%), Positives = 164/292 (56%)
Query: 27 GVRNGKEYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGY 84
G++ KE FE + G ++F++S+LP K +A V HGYG + F+ I A GY
Sbjct: 70 GIKT-KESFEVNSRGVEIFSKSWLPEASKPRALVCFCHGYGDTCTFFFEGIARRLALSGY 128
Query: 85 AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAAT 144
VFA D G G S+G+ Y+ + + + + +++ + + LP+FLFG+SMGGA +
Sbjct: 129 GVFAMDYPGFGLSEGLHGYIPSFDLLVQDVIEHYSNIKANPEFSSLPSFLFGQSMGGAVS 188
Query: 145 MLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA---MPDNKMV 201
+ ++ + +PN W G + AP+ I +++ P + + +L GLA+ +P +
Sbjct: 189 LKIHLK-QPNAWAGAVLLAPMCKIADDLVPPPV---LKQILIGLANVLPKHKLVPQKDLA 244
Query: 202 GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261
+D K + N Y+GKPR+ T E+ R Q I+ +V++P L +HG AD V
Sbjct: 245 EAGFRDIRKRDMTPYNMICYSGKPRLRTAVEMLRTTQDIEKQLQEVSLPILILHGEADTV 304
Query: 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
T P+ S+ LYEKA S DK I +Y+ YHSL++GEPD+ VL D+ W+++
Sbjct: 305 TDPSVSRELYEKAKSPDKKIVLYENAYHSLLEGEPDDMILRVLSDIISWLND 356
|
|
| TAIR|locus:2039822 AT2G39410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 92/291 (31%), Positives = 157/291 (53%)
Query: 25 SQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWG 83
++ ++ + + + G KLFT +LP +++ +A V++ HGYG + G
Sbjct: 5 TEDIKYEESFIKNTRGFKLFTCRWLPTNREPRALVFLCHGYGMECSITMNSTARRLVKAG 64
Query: 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAA 143
+AV+ D GHG+SDG+ Y+ + +++ + + + E + F+ GESMGGA
Sbjct: 65 FAVYGMDYEGHGKSDGLSAYISNFDRLVDDVSTHYTAICEREENKWKMRFMLGESMGGAV 124
Query: 144 TMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK 203
+L+ + P+ W G I AP+ I E MKPS + + L + W +P ++
Sbjct: 125 VLLLG-RKNPDFWDGAILVAPMCKIAEEMKPSPFVISILTKLISIIPKWKIIPSQDIIEI 183
Query: 204 AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263
+ K+PE K + NP G+PR+ T E+ R+ ++ +V++PFL +HG D VT
Sbjct: 184 SYKEPEIRKQVRENPLCSKGRPRLKTAYELLRISNDLEKRLQEVSLPFLVLHGDDDKVTD 243
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
S+ LY+ A SADK++K+Y GM+H L+ GE EN +V D+ W+++R
Sbjct: 244 KAVSQELYKVALSADKTLKLYPGMWHGLLTGETPENIEIVFADVISWLEKR 294
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.2.37 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 323 | |||
| PLN02298 | 330 | PLN02298, PLN02298, hydrolase, alpha/beta fold fam | 1e-114 | |
| PLN02385 | 349 | PLN02385, PLN02385, hydrolase; alpha/beta fold fam | 3e-68 | |
| PLN02652 | 395 | PLN02652, PLN02652, hydrolase; alpha/beta fold fam | 4e-37 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 1e-31 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 4e-19 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-15 | |
| pfam12146 | 80 | pfam12146, Hydrolase_4, Putative lysophospholipase | 5e-13 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-12 | |
| TIGR01607 | 332 | TIGR01607, PST-A, Plasmodium subtelomeric family ( | 2e-08 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 8e-08 | |
| COG1073 | 299 | COG1073, COG1073, Hydrolases of the alpha/beta sup | 3e-07 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 1e-06 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-04 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 6e-04 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 0.002 | |
| COG1647 | 243 | COG1647, COG1647, Esterase/lipase [General functio | 0.003 |
| >gnl|CDD|165939 PLN02298, PLN02298, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 332 bits (853), Expect = e-114
Identities = 134/321 (41%), Positives = 195/321 (60%), Gaps = 6/321 (1%)
Query: 3 QETQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPL-DQKVKATVYM 60
+ ET ++WG PEEEYY +G++ K +F +P G LFT+S+LP +A ++M
Sbjct: 5 SDHATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFM 64
Query: 61 THGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
HGYG+D W FQ I A G+A FA DL GHGRS+G+R Y+ +++ V LSFF
Sbjct: 65 VHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNS 124
Query: 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180
V+ E ++ LP FL+GESMGGA +L++ + P + G + AP+ I + ++P
Sbjct: 125 VKQREEFQGLPRFLYGESMGGAICLLIHL-ANPEGFDGAVLVAPMCKISDKIRPPWPIPQ 183
Query: 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240
+ + T A +P ++ K++K P K + NP RY GKPR+GT+ E+ RV Y+
Sbjct: 184 ILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYL 243
Query: 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300
V++PF+ +HG+AD VT P S+ LYE+A S DK+IKIYDGM HSL+ GEPDEN
Sbjct: 244 GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENI 303
Query: 301 NLVLKDMREWIDERVERCGPK 321
+V +D+ W++ ERC K
Sbjct: 304 EIVRRDILSWLN---ERCTGK 321
|
Length = 330 |
| >gnl|CDD|215216 PLN02385, PLN02385, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 3e-68
Identities = 107/295 (36%), Positives = 167/295 (56%), Gaps = 17/295 (5%)
Query: 32 KEYFETPNGK---LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFA 88
+E +E N + +F++S+LP + + KA V HGYG + F+ I A+ GY VFA
Sbjct: 62 EESYEV-NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFA 120
Query: 89 ADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMY 148
D G G S+G+ Y+ + + + + ++ + +R LP+FLFG+SMGGA + ++
Sbjct: 121 MDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVH 180
Query: 149 FQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK----- 203
+ +PN W G I AP+ I +++ P L L +L LA+ +P K+V +
Sbjct: 181 LK-QPNAWDGAILVAPMCKIADDVVPPPLVL---QILILLAN---LLPKAKLVPQKDLAE 233
Query: 204 -AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
A +D +K K+ N Y KPR+ T E+ R Q I+ +V++P L +HG AD VT
Sbjct: 234 LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVT 293
Query: 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
P+ SK LYEKASS+DK +K+Y+ YHS+++GEPDE VL D+ W+D +
Sbjct: 294 DPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHSTQ 348
|
Length = 349 |
| >gnl|CDD|215352 PLN02652, PLN02652, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 4e-37
Identities = 90/277 (32%), Positives = 145/277 (52%), Gaps = 14/277 (5%)
Query: 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR 101
LF +S+ P +++ + + HG +G + + G+ V+A D +GHG SDG+
Sbjct: 123 LFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH 181
Query: 102 CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATM-LMYFQSEPNTWTGLI 160
Y+ ++ V + +F + +R P +P FLFG S GGA + + S + G++
Sbjct: 182 GYVPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIV 239
Query: 161 FSAPLFVIPENMKPSKLHLFMYGLLFGL-ADTWAAMPDNKMVGKAIKDPEKLKVIASNPR 219
++P +KP+ + +F L A + NK +DP L S+P
Sbjct: 240 LTSPAL----RVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPL 295
Query: 220 RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADK 279
YTG RV T EI R+ Y+ NF VTVPF+ +HGTAD VT P +S+ LY +A+S K
Sbjct: 296 VYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHK 355
Query: 280 SIKIYDGMYHSLI-QGEPDENANLVLKDMREWIDERV 315
IK+YDG H L+ + E +E V +D+ +W+++R+
Sbjct: 356 DIKLYDGFLHDLLFEPEREE----VGRDIIDWMEKRL 388
|
Length = 395 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 1e-31
Identities = 73/308 (23%), Positives = 117/308 (37%), Gaps = 24/308 (7%)
Query: 14 WGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ 73
E + + G R L +++ + K V + HG G + ++
Sbjct: 6 PRTRTEGYFTGADGTR------------LRYRTWAA-PEPPKGVVVLVHGLG-EHSGRYE 51
Query: 74 KICISYATWGYAVFAADLLGHGRS-DGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132
++ A G+ V+A DL GHGRS G R ++ +F + + EP LP
Sbjct: 52 ELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIA--EPDPGLPV 109
Query: 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192
FL G SMGG +L Y P GL+ S+P + + L LL +
Sbjct: 110 FLLGHSMGGLIALL-YLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKL 168
Query: 193 AAMPDNKMVGKA---IKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQDNFSKVT 248
+ +DP ++ ++P G P + + +
Sbjct: 169 PVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIA 228
Query: 249 VPFLTVHGTADGVTC-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDM 307
+P L + G D V +E+A S DK +K+ G YH L+ EPD VLKD+
Sbjct: 229 LPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLN-EPDRAREEVLKDI 287
Query: 308 REWIDERV 315
W+ E +
Sbjct: 288 LAWLAEAL 295
|
Length = 298 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 4e-19
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-------CYLGDM 107
KA V+++HG G +G ++++ + ++ G VF+ D +GHGRS+G + Y+ D+
Sbjct: 25 KALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83
Query: 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167
+ K Y +P FL G SMG ++L +++ PN +T +I +PL
Sbjct: 84 ----VQHVVTIKST-----YPGVPVFLLGHSMGATISILAAYKN-PNLFTAMILMSPLVN 133
Query: 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK-----AIKDPEKLKVIASNPRRYT 222
+ + L + G+ + NK+VGK +D +++ +P
Sbjct: 134 AEAVPRLNLLAAKLMGIFY----------PNKIVGKLCPESVSRDMDEVYKYQYDPLVNH 183
Query: 223 GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK 282
K + G ++ + ++ K+ P L + GT + S + + ++ ++ IK
Sbjct: 184 EKIKAGFASQVLKATNKVRKIIPKIKTPILILQGT-NNEISDVSGAYYFMQHANCNREIK 242
Query: 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316
IY+G H L E DE V+K++ WI RV+
Sbjct: 243 IYEGAKHHL-HKETDEVKKSVMKEIETWIFNRVK 275
|
Length = 276 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 6e-15
Identities = 49/241 (20%), Positives = 77/241 (31%), Gaps = 58/241 (24%)
Query: 58 VYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117
V + HG G ++ + + A GY V A DL GHG SDG +E AA +
Sbjct: 1 VVLLHGAGGS-AESWRPLAEALAA-GYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAAL 58
Query: 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
+ P L G S+GGA L P GL+ +P E +
Sbjct: 59 LDALGLG------PVVLVGHSLGGAVA-LAAAARRPERVAGLVLISPPLRDLEEL----- 106
Query: 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237
+ L A +
Sbjct: 107 ---LAADAAALLALLRAALLD--------------------------------------- 124
Query: 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD 297
+++ +++TVP L +HG D + P +++ L E + + G H P+
Sbjct: 125 ADLREALARLTVPVLVIHGEDDPLVPPEAARRLAEA--LPGAELVVLPGAGHLPHLEHPE 182
Query: 298 E 298
E
Sbjct: 183 E 183
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|221442 pfam12146, Hydrolase_4, Putative lysophospholipase | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 5e-13
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI 100
KLF + +LP KA V + HG G +G + ++ A GYAV+A D GHGRS G
Sbjct: 3 KLFYRRWLPAGPPPKAVVVLVHGGGEHSGR-YAELAEELAAQGYAVYAYDHRGHGRSPGK 61
Query: 101 RCYLGDMEKVAASSLSFFK 119
R ++ + +F +
Sbjct: 62 RGHVPSFDDYVDDLDTFVE 80
|
This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. Length = 80 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 66.6 bits (161), Expect = 2e-12
Identities = 51/268 (19%), Positives = 77/268 (28%), Gaps = 32/268 (11%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
+ + HG+ + W + Y V A DL GHGRSD + A
Sbjct: 23 PLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAG---YSLSAYADDLA 79
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP----------- 164
+ L G SMGGA + + + P+ GL+ P
Sbjct: 80 ALLDA------LGLEKVVLVGHSMGGAVALALALR-HPDRVRGLVLIGPAPPPGLLEAAL 132
Query: 165 ------LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV-IASN 217
+ L + L AA+ G A L A+
Sbjct: 133 RQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAA 192
Query: 218 PRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277
R + + +++TVP L +HG D V P A
Sbjct: 193 FARAARADLAAALLALLDRDLRAA--LARITVPTLIIHGEDDPVV-PAELARRLAAALPN 249
Query: 278 DKSIKIYDGMYHSLIQGEPDENANLVLK 305
D + + G H P+ A +L
Sbjct: 250 DARLVVIPGAGHFPHLEAPEAFAAALLA 277
|
Length = 282 |
| >gnl|CDD|162444 TIGR01607, PST-A, Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 2e-08
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 46/266 (17%)
Query: 83 GYAVFAADLLGHGRSDG---IRCYLGDMEKVAASSLSFFKHVRHS--------------- 124
GY+V+ DL GHG SDG +R ++ + + + + + S
Sbjct: 74 GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYD 133
Query: 125 ----EPYRDLPAFLFGESMGGAATM----LMYFQSEPNT---WTGLIFSAPLFVIPENMK 173
+ R LP ++ G SMGG + L+ +E N G I + + I
Sbjct: 134 IVNTKENR-LPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGS 192
Query: 174 PSKLHLFMYGLLF-GLADTWAAMPDNKMVGKAIKDPEKLKVIAS----NPRRYTGKPRVG 228
F + + + + + + + K I+ EK + + RY G
Sbjct: 193 DDS---FKFKYFYLPVMNFMSRVFPTFRISKKIR-YEKSPYVNDIIKFDKFRYDGGITFN 248
Query: 229 TMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286
E+ + + + + +P L +H D V + Y K S ++K + +
Sbjct: 249 LASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLED 308
Query: 287 MYHSLIQGEP-DENANLVLKDMREWI 311
M H +I EP +E VLK + EWI
Sbjct: 309 MDH-VITIEPGNEE---VLKKIIEWI 330
|
This model represents a paralogous family of genes in Plasmodium falciparum and Plasmodium yoelii which are closely related to various phospholipases and lysophospholipases of plants as well as generally being related to the alpha/beta-fold superfamily of hydrolases. These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. Length = 332 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 8e-08
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG G D + + + A+ GY V A D GHG S G D E V A +
Sbjct: 1 LVVLLHGAGGDPE-AYAPLARALASRGYNVVAVDYPGHGASLGAP----DAEAVLADAPL 55
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
+ + L G S+GG +L+ + + A +K
Sbjct: 56 DPERI-----------VLVGHSLGGGVALLLA--ARDPRVKAAVVLAAGDPPDALDDLAK 102
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214
L + + ++ G D + + + A+ P +L VI
Sbjct: 103 LTVPVL-IIHGTRDGVVPPEEAEALAAALPGPAELVVI 139
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|223999 COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 3e-07
Identities = 35/294 (11%), Positives = 65/294 (22%), Gaps = 52/294 (17%)
Query: 22 YYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYAT 81
+ + + + + + G G+
Sbjct: 55 LHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLL 114
Query: 82 WGYAVFAADLLGHGRSDGIRCYLGDMEKV-AASSLSFFKHVRHSEPYRDLPAFLFGESMG 140
V D G S G + + S+ + + ++GES+G
Sbjct: 115 LSEGVLDKDYRLLGASLG--PRILAGLSLGGPSAGALLAWGPTRLDASRIV--VWGESLG 170
Query: 141 GAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200
GA +L+ A + L
Sbjct: 171 GALALLL--------LGANPELARELIDYLITPGGFAPLPA------------------- 203
Query: 201 VGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260
L + +I+ P L VHG D
Sbjct: 204 ------PEAPLDTLPLRAVLLLLLDPFDDAEKISP-------------RPVLLVHGERDE 244
Query: 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
V ++ LYE A K + G H + + L + E+++
Sbjct: 245 VVPLRDAEDLYEAARERPKKLLFVPGGGHIDL-YDNPPAVEQALDKLAEFLERH 297
|
Length = 299 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 56 ATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
V + HG+G D W+F + G V A DL GHG S G ++++AA+
Sbjct: 132 TPVVLIHGFGGDLNNWLFN---HAALAAGRPVIALDLPGHGAS-SKAVGAGSLDELAAAV 187
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATM 145
L+F + A L G SMGGA +
Sbjct: 188 LAFLDALGIE------RAHLVGHSMGGAVAL 212
|
Length = 371 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 3e-06
Identities = 51/237 (21%), Positives = 70/237 (29%), Gaps = 26/237 (10%)
Query: 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAA 143
+ V A DL G GRS + + A L + L G SMGG
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEALL-----DALGLDKVNLVGHSMGG-L 54
Query: 144 TMLMYFQSEP---------NTWTGLIFSAPLFVIPENMKPS---KLHLFMYG---LLFGL 188
L Y P T S+P N+ +Y L G
Sbjct: 55 IALAYAAKYPDRVKALVLVGTVHPAGLSSP-LTPRGNLLGLLLDNFFNRLYDSVEALLGR 113
Query: 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT 248
A V +K E L + +G V +
Sbjct: 114 AIKQFQALGRPFVSDFLKQFE-LSSLIRFGETLALDGLLGYALGYDLVWDRSAAL-KDID 171
Query: 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLK 305
VP L + G D + P +S+ L +A + D H +PDE A L+LK
Sbjct: 172 VPTLIIWGDDDPLVPPDASEKLAALFPNAQL--VVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290
D+ +K+TVP L +HGT DGV P ++ L + + +G HS
Sbjct: 98 DDLAKLTVPVLIIHGTRDGVVPPEEAEALAAAL-PGPAELVVIEGAGHS 145
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 55 KATVYMTHGY-GSDTGWMFQKICISYATWGYAVFAADLLGHGRS---DGIRCYLGDMEKV 110
K + HG+ GS W Q + I + A DL GHG S I Y D E++
Sbjct: 2 KPVLVFLHGFLGSGADW--QAL-IELLGPHFRCLAIDLPGHGSSQSPSDIERY--DFEEI 56
Query: 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGG 141
A L+ EP+ FL G SMGG
Sbjct: 57 AQLLLATLLDQLGIEPF-----FLVGYSMGG 82
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.002
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 57 TVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
V + HG+G+ W + I Y V+A DLLG G SD + ME A L
Sbjct: 90 PVLLVHGFGASIPHW---RRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLI 160
F + V P L G S+G A ++ +S + GL+
Sbjct: 147 DFLEEVVQK------PTVLIGNSVGSLACVIAASESTRDLVRGLV 185
|
Length = 360 |
| >gnl|CDD|224561 COG1647, COG1647, Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
+ + K+ P L V G D + S+ +Y+ S DK +K +G H + D+
Sbjct: 173 ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL---DKE 229
Query: 300 ANLVLKDMREWID 312
+ V +D+ +++
Sbjct: 230 RDQVEEDVITFLE 242
|
Length = 243 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 323 | |||
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 100.0 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 99.98 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.98 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.95 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.95 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.95 | |
| PRK10566 | 249 | esterase; Provisional | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.94 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.94 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.94 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.93 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.93 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.93 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.92 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.91 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.91 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.91 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.91 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.91 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.91 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.91 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.9 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.9 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.9 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.89 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.89 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.89 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.88 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.88 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.87 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.87 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.86 | |
| PLN00021 | 313 | chlorophyllase | 99.86 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.86 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.85 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.84 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.84 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.83 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.83 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.82 | |
| PRK10115 | 686 | protease 2; Provisional | 99.82 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.81 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.81 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.8 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.78 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.78 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.78 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.77 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.77 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.76 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.76 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.76 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.75 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.74 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.73 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.72 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.72 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.7 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.69 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.67 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.67 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.65 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.65 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.64 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.63 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.63 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.63 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.62 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.61 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.6 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.6 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.59 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.55 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.54 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.51 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.51 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.5 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.5 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.5 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.49 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.48 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.47 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.47 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.47 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.46 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.43 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.43 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.43 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.43 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.36 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.35 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.35 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.35 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.34 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.32 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.27 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.22 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.2 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 99.19 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 99.19 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.18 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 99.15 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.15 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.12 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.09 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.09 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.09 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 99.08 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 99.07 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 99.03 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 99.02 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.02 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.01 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.99 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.96 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.94 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.94 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.79 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.79 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.78 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.77 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.75 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.74 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.72 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.72 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.7 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.66 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.62 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.61 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.58 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.56 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.53 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.51 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.51 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 98.49 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.42 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.41 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.41 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.4 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.38 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.32 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 98.31 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.29 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 98.28 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 98.24 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.23 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 98.15 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.14 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 98.11 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 98.1 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.95 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.84 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.83 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 97.82 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.81 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.71 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.59 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.58 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.53 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.48 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 97.35 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.32 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 97.3 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 97.15 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.15 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 97.0 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 96.98 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.96 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.95 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 96.74 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.52 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.48 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 96.47 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 96.46 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 96.41 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.39 | |
| PLN02408 | 365 | phospholipase A1 | 96.25 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.24 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.18 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 96.08 | |
| PLN02324 | 415 | triacylglycerol lipase | 96.06 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.95 | |
| PLN02847 | 633 | triacylglycerol lipase | 95.94 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.88 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.81 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.74 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.4 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.37 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 95.25 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 95.21 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 95.03 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 95.03 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.02 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 95.01 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.2 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 94.16 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 93.45 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 93.26 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 90.91 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 89.93 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 88.44 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 86.75 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 86.71 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 83.72 | |
| COG3673 | 423 | Uncharacterized conserved protein [Function unknow | 81.72 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 81.56 |
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-47 Score=281.98 Aligned_cols=307 Identities=45% Similarity=0.805 Sum_probs=287.1
Q ss_pred CCCCCCCCCCCCccccccccCCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHHHhcCCc
Q 020630 7 PETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISYATWGY 84 (323)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~ 84 (323)
....++.++..+..+++...++.....++++.+| ++.+..|.|.. .+++..|+++||++....|.|+.++..|+..||
T Consensus 4 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~ 83 (313)
T KOG1455|consen 4 DANRRSLAGELSEEEYYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGF 83 (313)
T ss_pred cccCcccccccchhhhcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCC
Confidence 4456777888888888888888899999999999 99999999965 378899999999999988899999999999999
Q ss_pred EEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccC
Q 020630 85 AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 85 ~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~ 164 (323)
.|+++|++|||.|++...+..+++..++|+.+.++.+..+....+.+.+++||||||.+++.++.++|.. .+++|+++|
T Consensus 84 ~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~-w~G~ilvaP 162 (313)
T KOG1455|consen 84 AVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF-WDGAILVAP 162 (313)
T ss_pred eEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc-cccceeeec
Confidence 9999999999999999999999999999999999998877766688999999999999999999999998 999999999
Q ss_pred ccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcC
Q 020630 165 LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF 244 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (323)
.....+...+.+....+...+..+.+.|...+.+.......+++..+.....++..+...+......++++...++...+
T Consensus 163 mc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l 242 (313)
T KOG1455|consen 163 MCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNL 242 (313)
T ss_pred ccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhc
Confidence 99999999899999999999999999999888888888899999999999999999999999999999999999999999
Q ss_pred CcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++++|.+++||+.|.++.+..++.+++...+.+.++++|||.=|.++..++++..+.+...|.+||+++
T Consensus 243 ~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 243 NEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998889999999999999998788999999999999999876
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=289.57 Aligned_cols=309 Identities=42% Similarity=0.808 Sum_probs=227.2
Q ss_pred CCCCCCCCCCccccccccCCccceeEEecCCC-cEEEEEecCCCC-CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEE
Q 020630 9 TPPNYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISYATWGYAV 86 (323)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v 86 (323)
+.-..|+..+.++++...++..+..++.+.|| +|+|+.|.+.+. .++++|||+||++.+..|.|..++..|+++||+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V 90 (330)
T PLN02298 11 TEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFAC 90 (330)
T ss_pred CCccccccCCHHHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEE
Confidence 45568999999999999999999999999999 999999987642 4578899999998766667788888899899999
Q ss_pred EEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 87 FAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 87 i~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
+++|+||||.|.+......+++.+++|+.++++.+.........+++|+||||||.+++.++.++|++ |+++|+++|..
T Consensus 91 ~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~-v~~lvl~~~~~ 169 (330)
T PLN02298 91 FALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEG-FDGAVLVAPMC 169 (330)
T ss_pred EEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccc-ceeEEEecccc
Confidence 99999999999865554458899999999999999865322245799999999999999999999998 99999999876
Q ss_pred CCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCc
Q 020630 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK 246 (323)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (323)
.........+........+..+.+..........................++..+...........+..........+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 249 (330)
T PLN02298 170 KISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKD 249 (330)
T ss_pred cCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 55433222221111112222222111111111111111111112222222333333333333444444444445677889
Q ss_pred ccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+++|+|+++|++|.++|++.++.+++.++.+++++++++++||.+++++|+...+.+.+.+.+||.+++...
T Consensus 250 i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 250 VSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999988865678999999999999999998888899999999999987544
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=281.04 Aligned_cols=290 Identities=36% Similarity=0.654 Sum_probs=206.9
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
.++..++.++.+.+| +|++..|+|.+.+++++|||+||++++..+.|..+++.|+++||+|+++|+||||.|++.....
T Consensus 57 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 136 (349)
T PLN02385 57 SGIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYI 136 (349)
T ss_pred cCcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCc
Confidence 345566677888999 9999999987656789999999999886645788999999889999999999999998765555
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+++++++|+.++++.+..+......+++|+||||||.+++.++.++|++ |+++|+++|....................
T Consensus 137 ~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~-v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 137 PSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNA-WDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred CCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcch-hhheeEecccccccccccCchHHHHHHHH
Confidence 58999999999999998764322245799999999999999999999999 99999999876543322222212112111
Q ss_pred ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
+....+................+.............+...........++....+....+.++++|+|+|+|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 11111111111111111111112111111111122222222333444444444455677889999999999999999999
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.++.+++.+..+++++++++++||.++.++|++..+.+.+.|.+||+++..
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999988656789999999999999999988888899999999998864
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=242.18 Aligned_cols=269 Identities=22% Similarity=0.443 Sum_probs=185.6
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++...|| +|+|+.|.|.+ .+++.|+++||+++++. .|..+++.|+++||+|+++|+||||.|+.......++..+++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 5667799 99999998864 56788888899998877 899999999999999999999999999865433346777888
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
|+.+.++.+....+ ..+++|+||||||.+|+.+|.++|+. |+++|+++|..................... .+..
T Consensus 82 d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~-i~~lil~~p~~~~~~~~~~~~~~~~~~~~~---~~~~ 155 (276)
T PHA02857 82 DVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNPNL-FTAMILMSPLVNAEAVPRLNLLAAKLMGIF---YPNK 155 (276)
T ss_pred HHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCccc-cceEEEeccccccccccHHHHHHHHHHHHh---CCCC
Confidence 88888887765433 45899999999999999999999998 999999998765221111100000000000 0000
Q ss_pred ccCCCcccccccc-cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHH
Q 020630 193 AAMPDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
.. ........ .+.........++..........+..............+.++++|+|+++|++|.++|++.+..+.
T Consensus 156 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 156 IV---GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred cc---CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHH
Confidence 00 00000001 111111111122221111122222333333334456678899999999999999999999999998
Q ss_pred HHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 272 EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 272 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+. +++++.+++++||.++.|++ +..+++.+.+.+||+.+.
T Consensus 233 ~~~~-~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 233 QHAN-CNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHcc-CCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHhc
Confidence 8874 36899999999999997765 567889999999999863
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=234.38 Aligned_cols=282 Identities=24% Similarity=0.429 Sum_probs=220.6
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCC-CCCCCCCC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-~~~~~~~~ 106 (323)
...+..+...|| .++|..|.+.. .++.+||++||++.+.. .|..++..|..+||.|+++|+||||.|. +..+...+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 345677888999 99999998875 33489999999999887 8899999999999999999999999998 77777778
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
+.++.+|+.++++.+....+ ..+++++||||||.|++.++.+++.. |+++|+.+|....................+.
T Consensus 86 f~~~~~dl~~~~~~~~~~~~--~~p~~l~gHSmGg~Ia~~~~~~~~~~-i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~ 162 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDP--GLPVFLLGHSMGGLIALLYLARYPPR-IDGLVLSSPALGLGGAILRLILARLALKLLG 162 (298)
T ss_pred HHHHHHHHHHHHHHHhccCC--CCCeEEEEeCcHHHHHHHHHHhCCcc-ccEEEEECccccCChhHHHHHHHHHhccccc
Confidence 99999999999999987544 67999999999999999999999987 9999999999887641111112222333333
Q ss_pred ccccccccCC---CcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH-HHHhcCCcccccEEEEeeCCCccc
Q 020630 187 GLADTWAAMP---DNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-YIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.+.+.+.... .........+++.....+..++..........+......... ........+++|+|+++|++|.++
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv 242 (298)
T COG2267 163 RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVV 242 (298)
T ss_pred ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccc
Confidence 3333333222 122234445677788888888887777777777766666554 233446778999999999999999
Q ss_pred C-chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 263 C-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ .+...++++..+.+++++++++|+.|..+.|.+ ...+++.+.+.+|+.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~-~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 243 DNVEGLARFFERAGSPDKELKVIPGAYHELLNEPD-RAREEVLKDILAWLAEALP 296 (298)
T ss_pred cCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcc-hHHHHHHHHHHHHHHhhcc
Confidence 9 788888888888888999999999999995443 3448899999999998753
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=240.32 Aligned_cols=276 Identities=30% Similarity=0.539 Sum_probs=191.8
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.....+...+| .+++..|.|...+++++||++||++++.. .|..+++.|+++||+|+++|+||||.|++......+++
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 44556778888 99999999865466889999999998765 78899999999999999999999999987765556888
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
.+++|+.++++.+..+.+ ..+++++||||||.+++.++. +|+ . ++++|+.+|......... . ........
T Consensus 189 ~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p~~~~~-v~glVL~sP~l~~~~~~~--~-~~~~~~l~ 261 (395)
T PLN02652 189 YVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YPSIEDK-LEGIVLTSPALRVKPAHP--I-VGAVAPIF 261 (395)
T ss_pred HHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-ccCcccc-cceEEEECcccccccchH--H-HHHHHHHH
Confidence 999999999999987643 458999999999999998765 453 5 999999998865433211 1 11111111
Q ss_pred cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
....+.+..............++........++..+......................+.++++|+|+++|++|.++|++
T Consensus 262 ~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~ 341 (395)
T PLN02652 262 SLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPL 341 (395)
T ss_pred HHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHH
Confidence 11111111111000000011111111111222222222222222333333334456778899999999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.++.+++.+.+++++++++++++|..+++ ...+++.+.+.+||..++.
T Consensus 342 ~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 342 ASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 99999998765568999999999999863 2468899999999998875
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=233.47 Aligned_cols=277 Identities=16% Similarity=0.226 Sum_probs=185.9
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-----CC
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-----CY 103 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~ 103 (323)
.+..++...+| +++|..+++. .++++||++||++++.. .|..++..|+++||+|+++|+||||.|+... ..
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 35567778899 9999999875 34679999999998776 7888898898899999999999999997532 12
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+++++++|+.++++.+....+ ..+++++||||||.+++.+|.++|+. ++++|+++|.......... .....+..
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~--~~~~~l~GhSmGG~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~-~~~~~~~~ 182 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGP--YRKRYALAHSMGGAILTLFLQRHPGV-FDAIALCAPMFGIVLPLPS-WMARRILN 182 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCC--CCCeEEEEEcHHHHHHHHHHHhCCCC-cceEEEECchhccCCCCCc-HHHHHHHH
Confidence 34789999999999998754422 45899999999999999999999998 9999999987654322211 11111111
Q ss_pred ccccc---cccc----ccCCCccccccc-ccChh----hHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccE
Q 020630 184 LLFGL---ADTW----AAMPDNKMVGKA-IKDPE----KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 184 ~~~~~---~~~~----~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
..... .... ............ ..... ....+..++..........+..............+.++++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 262 (330)
T PRK10749 183 WAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPL 262 (330)
T ss_pred HHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCE
Confidence 11000 0000 000000000000 01111 112222222211111222333333333333456678899999
Q ss_pred EEEeeCCCcccCchhHHHHHHHhc-----CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 252 LTVHGTADGVTCPTSSKLLYEKAS-----SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
|+|+|++|.+++++.++.+++.++ .+++++++++|+||.++.|.+. ..+.+.+.|.+||+++
T Consensus 263 Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 263 LLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-MRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-HHHHHHHHHHHHHhhc
Confidence 999999999999999998888763 1456899999999999976653 4688999999999864
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=231.77 Aligned_cols=255 Identities=17% Similarity=0.186 Sum_probs=166.1
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC------CCCCChHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR------CYLGDMEK 109 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~------~~~~~~~~ 109 (323)
..+| +++|...+++ +++|||+||+++++. .|..+++.|+++ |+|+++|+||||.|+.+. ...+++++
T Consensus 14 ~~~~~~i~y~~~G~~----~~~vlllHG~~~~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~ 87 (294)
T PLN02824 14 RWKGYNIRYQRAGTS----GPALVLVHGFGGNAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFET 87 (294)
T ss_pred EEcCeEEEEEEcCCC----CCeEEEECCCCCChh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHH
Confidence 3467 9998887643 478999999999877 899999999887 899999999999998653 13468999
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC-chh--H-HHHHHhhcc
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM-KPS--K-LHLFMYGLL 185 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~-~~~--~-~~~~~~~~~ 185 (323)
+++|+.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++........ ... . ....+...+
T Consensus 88 ~a~~l~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T PLN02824 88 WGEQLNDFCSDVVGD------PAFVICNSVGGVVGLQAAVDAPEL-VRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL 160 (294)
T ss_pred HHHHHHHHHHHhcCC------CeEEEEeCHHHHHHHHHHHhChhh-eeEEEEECCCcccccccccchhhhHHHHHHHHHH
Confidence 999999999998754 899999999999999999999999 99999999764321111 000 0 000111111
Q ss_pred cccc--ccc-ccCCC----cccccccc-----cChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccE
Q 020630 186 FGLA--DTW-AAMPD----NKMVGKAI-----KDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPF 251 (323)
Q Consensus 186 ~~~~--~~~-~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~ 251 (323)
.... ..+ ..... ...+.... ........+.. .............+.... ......+.++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 161 RETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILR---PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred hchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHh---ccCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 0000 000 00000 00000000 00000000000 000000001111111000 01234567889999
Q ss_pred EEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|+|++|.+++.+.++.+.+.. +++++++++++||++++++| +++.+.|.+|+++
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 293 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAP----ELVNPLIESFVAR 293 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCH----HHHHHHHHHHHhc
Confidence 99999999999999888877766 66899999999999996666 6699999999875
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=224.45 Aligned_cols=258 Identities=16% Similarity=0.132 Sum_probs=168.1
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|...... ..+++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+.. .++++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~plvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~ 82 (276)
T TIGR02240 8 DLDGQSIRTAVRPGK--EGLTPLLIFNGIGANLE-LVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKLAA 82 (276)
T ss_pred ccCCcEEEEEEecCC--CCCCcEEEEeCCCcchH-HHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHHHH
Confidence 3467 9999776422 22579999999999887 89999999977 49999999999999986533 358999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccC
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM 195 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (323)
++++.+..+ +++|+||||||.+++.+|.++|++ |+++|++++...............................
T Consensus 83 ~~i~~l~~~------~~~LvG~S~GG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T TIGR02240 83 RMLDYLDYG------QVNAIGVSWGGALAQQFAHDYPER-CKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIH 155 (276)
T ss_pred HHHHHhCcC------ceEEEEECHHHHHHHHHHHHCHHH-hhheEEeccCCccccCCCchhHHHHhcCchhhhccccccc
Confidence 999998654 899999999999999999999998 9999999987653211111111000000000000000000
Q ss_pred CCcccccccc-cChhhHHHhhcCCcccCCCCCchhHHHHHHhh-HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHH
Q 020630 196 PDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 196 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.......... .++......... ................. ......+.++++|+|+|+|++|.++|++.++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~ 232 (276)
T TIGR02240 156 IAPDIYGGAFRRDPELAMAHASK---VRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWR 232 (276)
T ss_pred hhhhhccceeeccchhhhhhhhh---cccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHh
Confidence 0000000000 011110000000 00011111111111111 112244788999999999999999999999999998
Q ss_pred hcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ ++++++++++ ||++++++| +++++.|.+|+++...
T Consensus 233 ~--~~~~~~~i~~-gH~~~~e~p----~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 233 I--PNAELHIIDD-GHLFLITRA----EAVAPIIMKFLAEERQ 268 (276)
T ss_pred C--CCCEEEEEcC-CCchhhccH----HHHHHHHHHHHHHhhh
Confidence 8 7789999985 999996665 6699999999987654
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=226.24 Aligned_cols=253 Identities=16% Similarity=0.135 Sum_probs=159.7
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChHHHHhhHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~i~ 119 (323)
+++|...+..+ +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. ..++++++++|+.++++
T Consensus 35 ~i~y~~~G~~~---~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~ 110 (302)
T PRK00870 35 RMHYVDEGPAD---GPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFE 110 (302)
T ss_pred EEEEEecCCCC---CCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 57777766533 679999999998877 89999999987899999999999999976532 34589999999999999
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccccc-CCCc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA-MPDN 198 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 198 (323)
++..+ +++++||||||.+++.+|.++|++ |+++|++++........... ............ +.... ....
T Consensus 111 ~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ 181 (302)
T PRK00870 111 QLDLT------DVTLVCQDWGGLIGLRLAAEHPDR-FARLVVANTGLPTGDGPMPD-AFWAWRAFSQYS-PVLPVGRLVN 181 (302)
T ss_pred HcCCC------CEEEEEEChHHHHHHHHHHhChhh-eeEEEEeCCCCCCccccchH-HHhhhhcccccC-chhhHHHHhh
Confidence 88644 899999999999999999999999 99999998753221110010 000011100000 00000 0000
Q ss_pred ccccccccChhhHHHhhc---------CCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 199 KMVGKAIKDPEKLKVIAS---------NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
........... ...+.. ...........................+.++++|+++|+|++|.++|... +.
T Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~ 259 (302)
T PRK00870 182 GGTVRDLSDAV-RAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI 259 (302)
T ss_pred ccccccCCHHH-HHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH
Confidence 00000000000 000000 00000000000000000001111234568899999999999999999766 77
Q ss_pred HHHHhcCCCCc---EEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKS---IKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 270 ~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+ ++++ +.+++++||++++++| +.+.+.|.+|++++
T Consensus 260 ~~~~~--~~~~~~~~~~i~~~gH~~~~e~p----~~~~~~l~~fl~~~ 301 (302)
T PRK00870 260 LQKRI--PGAAGQPHPTIKGAGHFLQEDSG----EELAEAVLEFIRAT 301 (302)
T ss_pred HHhhc--ccccccceeeecCCCccchhhCh----HHHHHHHHHHHhcC
Confidence 88877 4444 8899999999996666 66899999998753
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=221.71 Aligned_cols=258 Identities=13% Similarity=0.131 Sum_probs=164.5
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..++. +++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+.. .++++++++|+.
T Consensus 13 ~~~g~~i~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~ 84 (295)
T PRK03592 13 EVLGSRMAYIETGE-----GDPIVFLHGNPTSSY-LWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLD 84 (295)
T ss_pred EECCEEEEEEEeCC-----CCEEEEECCCCCCHH-HHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 4477 999998873 579999999998876 899999999987 6999999999999987643 358999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc--cccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA--DTWA 193 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 193 (323)
++++.+..+ +++++||||||.+|+.++.++|++ |+++|++++....................+.... ....
T Consensus 85 ~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 85 AWFDALGLD------DVVLVGHDWGSALGFDWAARHPDR-VRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHhCCC------CeEEEEECHHHHHHHHHHHhChhh-eeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 999998754 899999999999999999999999 9999999984332110000000011111110000 0000
Q ss_pred c---CCCcccccc----cccChhhHHHhhcCCcccCCCCCc---------hhHHHHHHhhHHHHhcCCcccccEEEEeeC
Q 020630 194 A---MPDNKMVGK----AIKDPEKLKVIASNPRRYTGKPRV---------GTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 194 ~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
. ......... ........................ ................+.++++|+|+|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred cchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 0 000000000 000000000000000000000000 000011111122345577889999999999
Q ss_pred CCcccCchhHHHHH-HHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTSSKLLY-EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 258 ~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+|.++++.....+. +.. +++++.+++++||++++++| +++.+.|.+|+++..
T Consensus 238 ~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWP--NQLEITVFGAGLHFAQEDSP----EEIGAAIAAWLRRLR 290 (295)
T ss_pred CCcccCcHHHHHHHHHhh--hhcceeeccCcchhhhhcCH----HHHHHHHHHHHHHhc
Confidence 99999655555554 445 67899999999999996665 669999999998764
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=219.71 Aligned_cols=240 Identities=15% Similarity=0.204 Sum_probs=154.7
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
...|||+||++.+.. .|..+++.|.+.||+|+++|+||||.|+......++++++++|+.++++.+.. ..++++
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~l 76 (255)
T PLN02965 3 EIHFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP-----DHKVIL 76 (255)
T ss_pred ceEEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC-----CCCEEE
Confidence 346999999998766 89999999977789999999999999986554446899999999999999853 138999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc--ccccc-cccccCCCc------cccccc-
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL--LFGLA-DTWAAMPDN------KMVGKA- 204 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~------~~~~~~- 204 (323)
+||||||.+++.+|.++|++ |+++|++++.................... ..... ......... ......
T Consensus 77 vGhSmGG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDK-ISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY 155 (255)
T ss_pred EecCcchHHHHHHHHhCchh-eeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHH
Confidence 99999999999999999999 99999998764322111110000000000 00000 000000000 000000
Q ss_pred ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEe
Q 020630 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
............ ............... ......+.++++|+++++|++|.++|++.++.+.+.+ ++++++++
T Consensus 156 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i 227 (255)
T PLN02965 156 YNQSPLEDYTLS--SKLLRPAPVRAFQDL----DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVL 227 (255)
T ss_pred hcCCCHHHHHHH--HHhcCCCCCcchhhh----hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEe
Confidence 000000000000 000000000011011 1122345578999999999999999999999999998 78899999
Q ss_pred cCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++||++++++| +++.+.|.+|++.
T Consensus 228 ~~~GH~~~~e~p----~~v~~~l~~~~~~ 252 (255)
T PLN02965 228 EDSDHSAFFSVP----TTLFQYLLQAVSS 252 (255)
T ss_pred cCCCCchhhcCH----HHHHHHHHHHHHH
Confidence 999999997766 5588888888764
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=228.47 Aligned_cols=264 Identities=17% Similarity=0.211 Sum_probs=166.2
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH-HHHHHh---cCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISYA---TWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~---~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+.+.+| +|+|...+|.++..+++|||+||++++.. .|.. +.+.|. +++|+|+++|+||||.|+.+....++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 3444566 99999999876455789999999998876 6764 445554 3589999999999999987654556899
Q ss_pred HHHhhHH-HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc--
Q 020630 109 KVAASSL-SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-- 185 (323)
Q Consensus 109 ~~~~d~~-~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-- 185 (323)
++++++. .+++.++.+ +++++||||||.+++.+|.++|++ |+++|++++........... ........
T Consensus 258 ~~a~~l~~~ll~~lg~~------k~~LVGhSmGG~iAl~~A~~~Pe~-V~~LVLi~~~~~~~~~~~~~--~~~~~~~~~~ 328 (481)
T PLN03087 258 EHLEMIERSVLERYKVK------SFHIVAHSLGCILALALAVKHPGA-VKSLTLLAPPYYPVPKGVQA--TQYVMRKVAP 328 (481)
T ss_pred HHHHHHHHHHHHHcCCC------CEEEEEECHHHHHHHHHHHhChHh-ccEEEEECCCccccccchhH--HHHHHHHhcc
Confidence 9999994 788887644 899999999999999999999999 99999999765432221110 00000000
Q ss_pred cccccccccCC-Cccccc---cc-----ccChhhHHH----hhcC-Cccc--------CCCCCchhHHHHHHh----h-H
Q 020630 186 FGLADTWAAMP-DNKMVG---KA-----IKDPEKLKV----IASN-PRRY--------TGKPRVGTMREIARV----C-Q 238 (323)
Q Consensus 186 ~~~~~~~~~~~-~~~~~~---~~-----~~~~~~~~~----~~~~-~~~~--------~~~~~~~~~~~~~~~----~-~ 238 (323)
....+...... ...+.. .. ......... .... .... ...........+... . .
T Consensus 329 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~ 408 (481)
T PLN03087 329 RRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDG 408 (481)
T ss_pred cccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhh
Confidence 00000000000 000000 00 000000000 0000 0000 000000000001100 0 1
Q ss_pred HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccc-cCCchhHHHHHHHHHHHHHH
Q 020630 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ-GEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~ 313 (323)
.......++++|+|+|+|++|.++|++..+.+.+.+ +++++++++++||..++ ++| +.+++.|.+|...
T Consensus 409 ~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p----~~fa~~L~~F~~~ 478 (481)
T PLN03087 409 YLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQ----KEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCH----HHHHHHHHHHhhc
Confidence 112223468999999999999999999999999999 88999999999999885 555 6688888888754
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=208.21 Aligned_cols=265 Identities=18% Similarity=0.144 Sum_probs=176.0
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCCh
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~ 107 (323)
..++.+.+.+| ++++..-++.+ +|.|+++||+..... .|+.....|+.+||+|+++|+||+|.|+.+.. ..|++
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~---gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGD---GPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCC---CCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 34667788889 88888887765 999999999998755 89999999999999999999999999998876 67899
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
..++.|+..+++.++.+ +++++||+||+.+|+.+|..+|++ |+++|+++.....+....... . ...+...
T Consensus 97 ~~l~~di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~Per-v~~lv~~nv~~~~p~~~~~~~-~--~~~f~~~ 166 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFYPER-VDGLVTLNVPFPNPKLKPLDS-S--KAIFGKS 166 (322)
T ss_pred HHHHHHHHHHHHHhccc------eeEEEeccchhHHHHHHHHhChhh-cceEEEecCCCCCcccchhhh-h--ccccCcc
Confidence 99999999999999955 999999999999999999999999 999999987665111110000 0 0000000
Q ss_pred cccc-ccc-CCCcc-----------------------cccccc---cChhhHHHhhcCCcccC---CCCCchhHHHHHHh
Q 020630 188 LADT-WAA-MPDNK-----------------------MVGKAI---KDPEKLKVIASNPRRYT---GKPRVGTMREIARV 236 (323)
Q Consensus 188 ~~~~-~~~-~~~~~-----------------------~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 236 (323)
.-.. +.. ..... ...... ........+......+. -.....+.+++.+.
T Consensus 167 ~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~ 246 (322)
T KOG4178|consen 167 YYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRN 246 (322)
T ss_pred ceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhC
Confidence 0000 000 00000 000000 00000111111111111 11122333333333
Q ss_pred hHHHHhcCCcccccEEEEeeCCCcccCchhHHH-HHHHhcCCCC-cEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL-LYEKASSADK-SIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+-....+.++++|+++|+|+.|.+.+...... +.+.+ ++. +.++++++||+...|+| +++++.+.+|+++.
T Consensus 247 w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v--p~l~~~vv~~~~gH~vqqe~p----~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 247 WEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV--PRLTERVVIEGIGHFVQQEKP----QEVNQAILGFINSF 320 (322)
T ss_pred chhccccccccccceEEEEecCcccccchhHHHHHHHhh--ccccceEEecCCcccccccCH----HHHHHHHHHHHHhh
Confidence 221234567889999999999999988763333 33344 333 78899999999996666 66999999999864
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=220.35 Aligned_cols=268 Identities=22% Similarity=0.345 Sum_probs=190.4
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhh-------------------------HHHHHHHhcCCcEEEE
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-------------------------QKICISYATWGYAVFA 88 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-------------------------~~~~~~l~~~g~~vi~ 88 (323)
+.+.|| +|+++.|.+. +++.+|+++||++.+..+.+ ..+++.|.++||+|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 456789 9999999875 46889999999998865221 4678999999999999
Q ss_pred eccccCcCCCCC---CCCCCChHHHHhhHHHHHHHHHhh-------------------CCCCCCCEEEEEechhHHHHHH
Q 020630 89 ADLLGHGRSDGI---RCYLGDMEKVAASSLSFFKHVRHS-------------------EPYRDLPAFLFGESMGGAATML 146 (323)
Q Consensus 89 ~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~i~~l~~~-------------------~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
+|+||||.|.+. .....+++++++|+.++++.+... ++ ...+++|+||||||.+++.
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKE-NRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccccc-CCCceeEeeccCccHHHHH
Confidence 999999999864 233347999999999999987652 11 1458999999999999999
Q ss_pred HHhhcCC-------CCeeEEEEccCccCCCCCC-----chhHHHHHHhhcccccccccccCCCcccccccccChhhHHHh
Q 020630 147 MYFQSEP-------NTWTGLIFSAPLFVIPENM-----KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 147 ~a~~~p~-------~~v~~~il~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
++..++. ..++++|+++|...+.... ........+...+..+.+...... ......++......
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----KIRYEKSPYVNDII 234 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----ccccccChhhhhHH
Confidence 9876532 1389999999876542211 011111122222222222221110 01122334455566
Q ss_pred hcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc--cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
..++..+.......+...+..........+..+ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|.++
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~ 314 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVIT 314 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCc
Confidence 666666655566677777777666555556666 799999999999999999999998887666789999999999999
Q ss_pred ccCCchhHHHHHHHHHHHHH
Q 020630 293 QGEPDENANLVLKDMREWID 312 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+. ..+++.+.+.+||+
T Consensus 315 ~E~---~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 315 IEP---GNEEVLKKIIEWIS 331 (332)
T ss_pred cCC---CHHHHHHHHHHHhh
Confidence 543 25779999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=218.04 Aligned_cols=256 Identities=13% Similarity=0.163 Sum_probs=158.9
Q ss_pred CccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~ 106 (323)
++.+..+++. +| +++|...+. +++|||+||++.+.. .|..+.+.|.+ +|+|+++|+||||.|+.+....++
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~G~-----~~~iv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~ 83 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDEGT-----GPPILLCHGNPTWSF-LYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQ 83 (286)
T ss_pred ccccceEEEc-CCcEEEEEECCC-----CCEEEEECCCCccHH-HHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccC
Confidence 3344555555 55 898887663 578999999987655 78999999976 599999999999999866544468
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc--
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL-- 184 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~-- 184 (323)
.+++++++.++++.+..+ +++++||||||.+++.++..+|++ |+++|++++........... ........
T Consensus 84 ~~~~~~~~~~~~~~~~~~------~~~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~ 155 (286)
T PRK03204 84 IDEHARVIGEFVDHLGLD------RYLSMGQDWGGPISMAVAVERADR-VRGVVLGNTWFWPADTLAMK-AFSRVMSSPP 155 (286)
T ss_pred HHHHHHHHHHHHHHhCCC------CEEEEEECccHHHHHHHHHhChhh-eeEEEEECccccCCCchhHH-HHHHHhcccc
Confidence 899999999999987643 899999999999999999999999 99999987754221111110 00000000
Q ss_pred -ccccccccccCCCcccccc----cccChhhHHHhhcCCcccCCCCCchhHHHH-------HHhhHHHHhcCCc--cccc
Q 020630 185 -LFGLADTWAAMPDNKMVGK----AIKDPEKLKVIASNPRRYTGKPRVGTMREI-------ARVCQYIQDNFSK--VTVP 250 (323)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~P 250 (323)
...+.. .......+... ......... +.. .............. ..........+.. +++|
T Consensus 156 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 229 (286)
T PRK03204 156 VQYAILR--RNFFVERLIPAGTEHRPSSAVMAH-YRA---VQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKP 229 (286)
T ss_pred chhhhhh--hhHHHHHhccccccCCCCHHHHHH-hcC---CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCC
Confidence 000000 00000000000 000000000 000 00000000000000 0000111111111 2899
Q ss_pred EEEEeeCCCcccCch-hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 251 FLTVHGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+++|+|++|.++++. ..+.+.+.+ ++.++++++++||++++++| +++.+.|.+||
T Consensus 230 tliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~P----e~~~~~i~~~~ 285 (286)
T PRK03204 230 TLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAP----DRIAAAIIERF 285 (286)
T ss_pred eEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCH----HHHHHHHHHhc
Confidence 999999999988665 467788888 78999999999999997666 66888888886
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=214.75 Aligned_cols=253 Identities=13% Similarity=0.122 Sum_probs=163.1
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+++|+.+++.+...+|+|||+||++++.. .|..++..|.+ +|+|+++|+||||.|..... ++++++++|+.++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchh-HHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHH
Confidence 35677776665566899999999998877 88899999976 59999999999999986544 4899999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccc
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (323)
+..+ +++++||||||.+++.+|.++|++ |+++|++++............................. .....
T Consensus 78 l~~~------~~~lvGhS~Gg~va~~~a~~~~~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 148 (255)
T PRK10673 78 LQIE------KATFIGHSMGGKAVMALTALAPDR-IDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQ--QAAAI 148 (255)
T ss_pred cCCC------ceEEEEECHHHHHHHHHHHhCHhh-cceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHH--HHHHH
Confidence 8643 799999999999999999999998 99999987533221110000000000000000000000 00000
Q ss_pred ccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCc
Q 020630 201 VGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280 (323)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 280 (323)
.................................+.... ..+.++++++|+|+|+|++|..++.+..+.+.+.+ ++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~ 225 (255)
T PRK10673 149 MRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQAR 225 (255)
T ss_pred HHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh-CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CCcE
Confidence 00011111111111110000000000000111111110 12346778999999999999999999999998888 7899
Q ss_pred EEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 281 ~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+++++||+.++++| +++.+.+.+||.+
T Consensus 226 ~~~~~~~gH~~~~~~p----~~~~~~l~~fl~~ 254 (255)
T PRK10673 226 AHVIAGAGHWVHAEKP----DAVLRAIRRYLND 254 (255)
T ss_pred EEEeCCCCCeeeccCH----HHHHHHHHHHHhc
Confidence 9999999999996555 6688999999875
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=220.24 Aligned_cols=262 Identities=18% Similarity=0.252 Sum_probs=163.3
Q ss_pred EEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHH
Q 020630 34 YFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
++...+. +++|...++.+ ...+|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+....+++++++
T Consensus 65 ~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a 142 (360)
T PLN02679 65 KWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWA 142 (360)
T ss_pred eEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHH
Confidence 3444455 89998887641 113589999999998876 89999999977 69999999999999987654456899999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh-cCCCCeeEEEEccCccCCCCCC-chhHHHHHH------hh
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENM-KPSKLHLFM------YG 183 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~il~~~~~~~~~~~-~~~~~~~~~------~~ 183 (323)
+++.++++.+..+ +++|+||||||.+++.++.. +|++ |+++|++++........ ...+..... ..
T Consensus 143 ~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~P~r-V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (360)
T PLN02679 143 ELILDFLEEVVQK------PTVLIGNSVGSLACVIAASESTRDL-VRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLID 215 (360)
T ss_pred HHHHHHHHHhcCC------CeEEEEECHHHHHHHHHHHhcChhh-cCEEEEECCccccccccccchHHHhhhcchHHHHH
Confidence 9999999988654 89999999999999998874 6888 99999999865332111 011110000 00
Q ss_pred cccc---ccccc-ccCCCcccc----cccc-----cChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCCccc
Q 020630 184 LLFG---LADTW-AAMPDNKMV----GKAI-----KDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVT 248 (323)
Q Consensus 184 ~~~~---~~~~~-~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 248 (323)
.+.. ..... ........+ .... ..+........ ..........+...... ..+....+.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 292 (360)
T PLN02679 216 FLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG---PADDEGALDAFVSIVTGPPGPNPIKLIPRIS 292 (360)
T ss_pred HHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh---hccCCChHHHHHHHHhcCCCCCHHHHhhhcC
Confidence 0000 00000 000000000 0000 00001111000 00000011111111110 001234567889
Q ss_pred ccEEEEeeCCCcccCchhH-----HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 249 VPFLTVHGTADGVTCPTSS-----KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|+|+|+|++|.++|++.. ..+.+.+ +++++++++++||++++++| +++++.|.+||++
T Consensus 293 ~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~P----e~~~~~I~~FL~~ 356 (360)
T PLN02679 293 LPILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRP----DLVHEKLLPWLAQ 356 (360)
T ss_pred CCEEEEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCH----HHHHHHHHHHHHh
Confidence 9999999999999988642 2344445 78999999999999996555 6799999999975
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=210.68 Aligned_cols=248 Identities=12% Similarity=0.126 Sum_probs=162.2
Q ss_pred EEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHH
Q 020630 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l 121 (323)
++|..++++. ..+|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|.......++++++++++.++++.+
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGS-YWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchh-HHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4677887643 44789999999999877 78888888865 699999999999999876555568999999999999988
Q ss_pred HhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc-cccc-----C
Q 020630 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD-TWAA-----M 195 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~ 195 (323)
+.. +++++||||||.+++.++.++|+. |+++|++++........... .......+..... .+.. .
T Consensus 78 ~~~------~~~l~G~S~Gg~~a~~~a~~~~~~-v~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T TIGR03611 78 NIE------RFHFVGHALGGLIGLQLALRYPER-LLSLVLINAWSRPDPHTRRC--FDVRIALLQHAGPEAYVHAQALFL 148 (257)
T ss_pred CCC------cEEEEEechhHHHHHHHHHHChHH-hHHheeecCCCCCChhHHHH--HHHHHHHHhccCcchhhhhhhhhh
Confidence 643 899999999999999999999988 99999998765432211110 0000011000000 0000 0
Q ss_pred CCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHH
Q 020630 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.......... .............+. ........... ..+....+.++++|+++++|++|.++|++.++.+.+.
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 223 (257)
T TIGR03611 149 YPADWISENA--ARLAADEAHALAHFP---GKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAA 223 (257)
T ss_pred ccccHhhccc--hhhhhhhhhcccccC---ccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHh
Confidence 0000000000 000000000000000 00000100000 0112345678899999999999999999999999988
Q ss_pred hcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ ++++++.++++||..++++| +++.+.|.+||+
T Consensus 224 ~--~~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 256 (257)
T TIGR03611 224 L--PNAQLKLLPYGGHASNVTDP----ETFNRALLDFLK 256 (257)
T ss_pred c--CCceEEEECCCCCCccccCH----HHHHHHHHHHhc
Confidence 8 77899999999999996555 668888999885
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=210.12 Aligned_cols=257 Identities=16% Similarity=0.191 Sum_probs=165.5
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+...+| +++|...++.+ +++|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|..+....++++.+++
T Consensus 9 ~~~~~~~~~~~~~~~g~~~---~~~vv~~hG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTA---GPLLLLLHGTGASTH-SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred ceeeECCEEEEEEecCCCC---CCeEEEEcCCCCCHH-HHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 3445577 99998887644 689999999998876 88999999976 599999999999999876554568999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc--ccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL--FGLAD 190 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 190 (323)
|+.++++.+..+ +++|+||||||.+++.+|.++|++ ++++|++++.......... .....+.... .....
T Consensus 84 ~l~~~i~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 155 (278)
T TIGR03056 84 DLSALCAAEGLS------PDGVIGHSAGAAIALRLALDGPVT-PRMVVGINAALMPFEGMAG-TLFPYMARVLACNPFTP 155 (278)
T ss_pred HHHHHHHHcCCC------CceEEEECccHHHHHHHHHhCCcc-cceEEEEcCcccccccccc-cccchhhHhhhhcccch
Confidence 999999887643 789999999999999999999998 9999998875432211100 0000000000 00000
Q ss_pred cccc--CCCccccccccc------ChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCCcccccEEEEeeCCCc
Q 020630 191 TWAA--MPDNKMVGKAIK------DPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 191 ~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
.... ............ ........... ................ .......++++++|+++|+|++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~ 232 (278)
T TIGR03056 156 PMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRL---IRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDK 232 (278)
T ss_pred HHHHhhcccCcchhHHhhccccccccchhhHHHHh---hcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCc
Confidence 0000 000000000000 00000000000 0000000000000000 011234567889999999999999
Q ss_pred ccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|.+.++.+.+.+ +++++++++++||++++++| +++.+.|.+|++
T Consensus 233 ~vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~f~~ 278 (278)
T TIGR03056 233 AVPPDESKRAATRV--PTATLHVVPGGGHLVHEEQA----DGVVGLILQAAE 278 (278)
T ss_pred ccCHHHHHHHHHhc--cCCeEEEECCCCCcccccCH----HHHHHHHHHHhC
Confidence 99999999998887 77899999999999996555 668899998873
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=210.89 Aligned_cols=257 Identities=13% Similarity=0.106 Sum_probs=164.5
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC---CCCChH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC---YLGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---~~~~~~ 108 (323)
......+| +++|...++.+ +++|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.+.. ..++++
T Consensus 107 ~~~~~~~~~~~~y~~~G~~~---~~~ivllHG~~~~~~-~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~ 181 (383)
T PLN03084 107 QSQASSDLFRWFCVESGSNN---NPPVLLIHGFPSQAY-SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLD 181 (383)
T ss_pred eeEEcCCceEEEEEecCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHH
Confidence 34456778 99988887644 689999999998766 89999999976 69999999999999987643 246899
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc-cc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-FG 187 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~ 187 (323)
++++++.++++.+..+ +++|+|||+||.+++.+|..+|++ |+++|++++............ ...+...+ ..
T Consensus 182 ~~a~~l~~~i~~l~~~------~~~LvG~s~GG~ia~~~a~~~P~~-v~~lILi~~~~~~~~~~~p~~-l~~~~~~l~~~ 253 (383)
T PLN03084 182 EYVSSLESLIDELKSD------KVSLVVQGYFSPPVVKYASAHPDK-IKKLILLNPPLTKEHAKLPST-LSEFSNFLLGE 253 (383)
T ss_pred HHHHHHHHHHHHhCCC------CceEEEECHHHHHHHHHHHhChHh-hcEEEEECCCCccccccchHH-HHHHHHHHhhh
Confidence 9999999999999754 899999999999999999999999 999999998753221101111 11010000 00
Q ss_pred cccccccCCCcccccc---cccChhhHHHhhcCCcccCCCCCch-hHHHHHHhh--------HHHHhc--CCcccccEEE
Q 020630 188 LADTWAAMPDNKMVGK---AIKDPEKLKVIASNPRRYTGKPRVG-TMREIARVC--------QYIQDN--FSKVTVPFLT 253 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~--~~~~~~P~l~ 253 (323)
+............+.. ..........+. .+ +....... ....+.+.. ...... ..++++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~--~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLi 330 (383)
T PLN03084 254 IFSQDPLRASDKALTSCGPYAMKEDDAMVYR-RP--YLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITV 330 (383)
T ss_pred hhhcchHHHHhhhhcccCccCCCHHHHHHHh-cc--ccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEE
Confidence 0000000000000000 000000000110 00 00000000 001111110 011111 1457999999
Q ss_pred EeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|+|++|.+++.+.++.+.+.. +.++.+++++||+++.++| +++++.|.+|+.
T Consensus 331 I~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E~P----e~v~~~I~~Fl~ 382 (383)
T PLN03084 331 CWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQEDCG----EELGGIISGILS 382 (383)
T ss_pred EeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchhCH----HHHHHHHHHHhh
Confidence 999999999998888777753 6799999999999995544 678899999885
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=210.60 Aligned_cols=239 Identities=16% Similarity=0.197 Sum_probs=148.9
Q ss_pred EEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHH
Q 020630 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l 121 (323)
++|..+|. ..|+|||+||++++.. .|..+.+.|.++ |+|+++|+||||.|..... ++++++++++.+ +
T Consensus 4 ~~y~~~G~----g~~~ivllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~--~~~~~~~~~l~~----~ 71 (256)
T PRK10349 4 IWWQTKGQ----GNVHLVLLHGWGLNAE-VWRCIDEELSSH-FTLHLVDLPGFGRSRGFGA--LSLADMAEAVLQ----Q 71 (256)
T ss_pred cchhhcCC----CCCeEEEECCCCCChh-HHHHHHHHHhcC-CEEEEecCCCCCCCCCCCC--CCHHHHHHHHHh----c
Confidence 45555542 1357999999998877 899999999875 9999999999999976432 467776666553 2
Q ss_pred HhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc-hh---HHHHHHhhcccccccccccCCC
Q 020630 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-PS---KLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
. .++++++||||||.+|+.+|.++|++ |+++|++++......... .. .....+...+....... .
T Consensus 72 ~------~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 140 (256)
T PRK10349 72 A------PDKAIWLGWSLGGLVASQIALTHPER-VQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRT----V 140 (256)
T ss_pred C------CCCeEEEEECHHHHHHHHHHHhChHh-hheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHH----H
Confidence 2 33899999999999999999999999 999999987543221100 00 00001100000000000 0
Q ss_pred cccccc-cccC----hhhHHHhhcCCcccCCCCCchhHH---HHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 198 NKMVGK-AIKD----PEKLKVIASNPRRYTGKPRVGTMR---EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 198 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
..++.. .... .......... .. .......... .... ..+....+.++++|+|+++|++|.++|.+.++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~ 217 (256)
T PRK10349 141 ERFLALQTMGTETARQDARALKKTV-LA-LPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM 217 (256)
T ss_pred HHHHHHHHccCchHHHHHHHHHHHh-hc-cCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHH
Confidence 000000 0000 0000000000 00 0000011111 1111 112345678899999999999999999998888
Q ss_pred HHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.+.+ +++++++++++||++++++| +.+.+.+.+|-+
T Consensus 218 ~~~~i--~~~~~~~i~~~gH~~~~e~p----~~f~~~l~~~~~ 254 (256)
T PRK10349 218 LDKLW--PHSESYIFAKAAHAPFISHP----AEFCHLLVALKQ 254 (256)
T ss_pred HHHhC--CCCeEEEeCCCCCCccccCH----HHHHHHHHHHhc
Confidence 88888 78999999999999997666 668888887743
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=211.16 Aligned_cols=248 Identities=16% Similarity=0.149 Sum_probs=150.9
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH---HHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK---ICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
+++|...+ .+|+|||+||++++.. .|.. .+..|.+.||+|+++|+||||.|+............++++.++
T Consensus 21 ~~~y~~~g-----~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 21 RIHYNEAG-----NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred eEEEEecC-----CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 56666554 2568999999987754 4543 3455666789999999999999986532111222467889999
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC--chhHHHHHHhhccccc-cccccc
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KPSKLHLFMYGLLFGL-ADTWAA 194 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~ 194 (323)
++.+..+ +++++||||||.+++.+|.++|++ |+++|++++........ ................ ......
T Consensus 95 l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (282)
T TIGR03343 95 MDALDIE------KAHLVGNSMGGATALNFALEYPDR-IGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQ 167 (282)
T ss_pred HHHcCCC------CeeEEEECchHHHHHHHHHhChHh-hceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHH
Confidence 9988654 899999999999999999999999 99999998753211100 0000001111000000 000000
Q ss_pred CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHH-------hhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR-------VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
........................ ... ......+.. ...+....+.++++|+|+++|++|.+++++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 168 MLNVFLFDQSLITEELLQGRWENI---QRQ--PEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHhhCccCcccCcHHHHHhHHHHh---hcC--HHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 000000000000000000000000 000 000000000 00112345678999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.+.+.+ +++++++++++||+++.++| +.+.+.|.+|+.
T Consensus 243 ~~~~~~~--~~~~~~~i~~agH~~~~e~p----~~~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNM--PDAQLHVFSRCGHWAQWEHA----DAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhC--CCCEEEEeCCCCcCCcccCH----HHHHHHHHHHhh
Confidence 9999988 78999999999999996666 668899999985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=212.81 Aligned_cols=260 Identities=12% Similarity=0.125 Sum_probs=156.9
Q ss_pred CCC-cEEEEEecCCCC----CCceEEEEecCCCCCcchhhH--HHHHHH-------hcCCcEEEEeccccCcCCCCCCCC
Q 020630 38 PNG-KLFTQSFLPLDQ----KVKATVYMTHGYGSDTGWMFQ--KICISY-------ATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~--~~~~~l-------~~~g~~vi~~d~~G~G~s~~~~~~ 103 (323)
.+| +++|..+|+... +.+|+|||+||++++.. .|. .+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 567 999998875310 11578999999998865 443 454444 134699999999999999865321
Q ss_pred ------CCChHHHHhhHHHHH-HHHHhhCCCCCCCEE-EEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchh
Q 020630 104 ------LGDMEKVAASSLSFF-KHVRHSEPYRDLPAF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 104 ------~~~~~~~~~d~~~~i-~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~ 175 (323)
.++++++++++.+++ +.++.+ +++ ++||||||.+|+.+|.++|++ |+++|++++....... ..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~------~~~~lvG~SmGG~vAl~~A~~~P~~-V~~LVLi~s~~~~~~~--~~ 196 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK------HLRLILGTSMGGMHAWMWGEKYPDF-MDALMPMASQPTEMSG--RN 196 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC------ceeEEEEECHHHHHHHHHHHhCchh-hheeeeeccCcccccH--HH
Confidence 357889998887754 667644 665 899999999999999999999 9999999875421111 11
Q ss_pred HHHHH-Hhhcccc---ccc-ccccCCC--cccc---------------cccccChhhHHHhhcCCcccCCCCCchhHHHH
Q 020630 176 KLHLF-MYGLLFG---LAD-TWAAMPD--NKMV---------------GKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233 (323)
Q Consensus 176 ~~~~~-~~~~~~~---~~~-~~~~~~~--~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
+.... ....... +.. ....... .... ...................... .....+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 275 (360)
T PRK06489 197 WMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT-ADANDFLYQ 275 (360)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh-cCHHHHHHH
Confidence 10000 0000000 000 0000000 0000 0000000000000000000000 001111111
Q ss_pred HHh--hHHHHhcCCcccccEEEEeeCCCcccCchhH--HHHHHHhcCCCCcEEEecCC----CccccccCCchhHHHHHH
Q 020630 234 ARV--CQYIQDNFSKVTVPFLTVHGTADGVTCPTSS--KLLYEKASSADKSIKIYDGM----YHSLIQGEPDENANLVLK 305 (323)
Q Consensus 234 ~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~~ 305 (323)
... ..+..+.+.+|++|+|+|+|++|.++|++.+ +.+.+.+ +++++++++++ ||..+ ++| +++.+
T Consensus 276 ~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e~P----~~~~~ 348 (360)
T PRK06489 276 WDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT-GSA----KFWKA 348 (360)
T ss_pred HHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc-cCH----HHHHH
Confidence 111 1113456788999999999999999998875 7788888 78999999996 99986 555 66999
Q ss_pred HHHHHHHHHH
Q 020630 306 DMREWIDERV 315 (323)
Q Consensus 306 ~i~~fl~~~~ 315 (323)
.|.+||++..
T Consensus 349 ~i~~FL~~~~ 358 (360)
T PRK06489 349 YLAEFLAQVP 358 (360)
T ss_pred HHHHHHHhcc
Confidence 9999997654
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=210.12 Aligned_cols=254 Identities=19% Similarity=0.187 Sum_probs=162.3
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+.+.+| +++|...+. +++|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+.+.. .++.+.+++
T Consensus 69 ~~~~~~~~~i~Y~~~g~-----g~~vvliHG~~~~~~-~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~ 140 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE-----GLPIVLIHGFGASAF-HWRYNIPELAK-KYKVYALDLLGFGWSDKALI-EYDAMVWRD 140 (354)
T ss_pred eEEEECCEEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCccc-ccCHHHHHH
Confidence 3334567 888887652 568999999998866 88888999976 59999999999999987643 358889999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch---------hH----HHH
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP---------SK----LHL 179 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~---------~~----~~~ 179 (323)
++.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|++++.......... .. ...
T Consensus 141 ~l~~~i~~~~~~------~~~lvG~S~Gg~ia~~~A~~~p~~-v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (354)
T PLN02578 141 QVADFVKEVVKE------PAVLVGNSLGGFTALSTAVGYPEL-VAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVK 213 (354)
T ss_pred HHHHHHHHhccC------CeEEEEECHHHHHHHHHHHhChHh-cceEEEECCCccccccccccccccccccchhhHHHhH
Confidence 999999988743 899999999999999999999999 9999999875432211100 00 000
Q ss_pred HHhhcccccccccc--cCCCcc----ccccccc-----ChhhHHHhhcCCcccCCCCCchhHHHHHHh------hHHHHh
Q 020630 180 FMYGLLFGLADTWA--AMPDNK----MVGKAIK-----DPEKLKVIASNPRRYTGKPRVGTMREIARV------CQYIQD 242 (323)
Q Consensus 180 ~~~~~~~~~~~~~~--~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 242 (323)
............+. ...... ....... +......... ................. .....+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T PLN02578 214 PLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITE---PAADPNAGEVYYRLMSRFLFNQSRYTLDS 290 (354)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHh---cccCCchHHHHHHHHHHHhcCCCCCCHHH
Confidence 00000000000000 000000 0000000 0000000000 00000001111111110 011234
Q ss_pred cCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+.++++|+++|+|++|.+++.+.++.+.+.+ ++.+++++ ++||+++.++| +++.+.|.+|++
T Consensus 291 ~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p----~~~~~~I~~fl~ 353 (354)
T PLN02578 291 LLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVP----EQVNKALLEWLS 353 (354)
T ss_pred HhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCH----HHHHHHHHHHHh
Confidence 56788999999999999999999999999988 77889888 58999996666 668889999985
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.1e-31 Score=183.81 Aligned_cols=228 Identities=15% Similarity=0.209 Sum_probs=169.1
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+.+|+|+||+.++.. ..+.++++|.++||.|.++.+||||......-. .+.++|.+++.+..++|.... ...|.+
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~g---y~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEAG---YDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHcC---CCeEEE
Confidence 579999999999988 889999999999999999999999987633222 379999999999999998543 448999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|.||||.+++.+|.++| ++++|.+|++......... +..+........ ... ....+.....+
T Consensus 90 ~GlSmGGv~alkla~~~p---~K~iv~m~a~~~~k~~~~i---ie~~l~y~~~~k-k~e----------~k~~e~~~~e~ 152 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP---PKKIVPMCAPVNVKSWRII---IEGLLEYFRNAK-KYE----------GKDQEQIDKEM 152 (243)
T ss_pred EeecchhHHHHHHHhhCC---ccceeeecCCcccccchhh---hHHHHHHHHHhh-hcc----------CCCHHHHHHHH
Confidence 999999999999999988 7899998887664332211 111111111000 000 00001111111
Q ss_pred hcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccccc
Q 020630 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
. .+. .........+....+.....+..|..|++++.|.+|..+|.+.+..+++.+.+...++.+++++||.+..
T Consensus 153 ~----~~~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~- 226 (243)
T COG1647 153 K----SYK-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL- 226 (243)
T ss_pred H----Hhh-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeec-
Confidence 1 111 1122344556666667778889999999999999999999999999999997778899999999999985
Q ss_pred CCchhHHHHHHHHHHHHH
Q 020630 295 EPDENANLVLKDMREWID 312 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~ 312 (323)
+...+++.+.+..||+
T Consensus 227 --D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 227 --DKERDQVEEDVITFLE 242 (243)
T ss_pred --chhHHHHHHHHHHHhh
Confidence 5557889999999986
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=196.82 Aligned_cols=276 Identities=18% Similarity=0.213 Sum_probs=161.8
Q ss_pred ccccCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC
Q 020630 23 YTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 23 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~ 101 (323)
.....+++...++...++ .+......+.. ..+.++|++||+|++.. .|-.-.+.|++ .++|+++|++|+|.|+.+.
T Consensus 58 l~~~~v~~~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g-~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~ 134 (365)
T KOG4409|consen 58 LSSVPVPYSKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLG-LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPK 134 (365)
T ss_pred hhhcCCCcceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHH-HHHHhhhhhhh-cCceEEecccCCCCCCCCC
Confidence 344566667777777777 66555555543 66889999999998877 66666778887 5999999999999999775
Q ss_pred CCCC---ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCC-Cch---
Q 020630 102 CYLG---DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN-MKP--- 174 (323)
Q Consensus 102 ~~~~---~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~-~~~--- 174 (323)
-... ....+++-++++....+. .+.+|+|||+||++|..||.+||++ |+.+||++|+...... ...
T Consensus 135 F~~d~~~~e~~fvesiE~WR~~~~L------~KmilvGHSfGGYLaa~YAlKyPer-V~kLiLvsP~Gf~~~~~~~~~~~ 207 (365)
T KOG4409|consen 135 FSIDPTTAEKEFVESIEQWRKKMGL------EKMILVGHSFGGYLAAKYALKYPER-VEKLILVSPWGFPEKPDSEPEFT 207 (365)
T ss_pred CCCCcccchHHHHHHHHHHHHHcCC------cceeEeeccchHHHHHHHHHhChHh-hceEEEecccccccCCCcchhhc
Confidence 3321 233444555555554444 3899999999999999999999999 9999999998765432 111
Q ss_pred ---hHHHHHHhhcccccccccccCCCc----cccccc-------ccChhhHHHhhcC-CcccCCCCCchh-HHHHHH---
Q 020630 175 ---SKLHLFMYGLLFGLADTWAAMPDN----KMVGKA-------IKDPEKLKVIASN-PRRYTGKPRVGT-MREIAR--- 235 (323)
Q Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~--- 235 (323)
......+......+.+........ .+.... +.+....+.+... .......+.-.. +..++.
T Consensus 208 ~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g 287 (365)
T KOG4409|consen 208 KPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGG 287 (365)
T ss_pred CCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccc
Confidence 111111111111111110000000 000000 0000000010000 000011111111 111111
Q ss_pred -hhHHHHhcCCcc--cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 236 -VCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 236 -~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+...+.+.+..+ +||+++|+|++|.+ +.....++...+....++.++++++||..++++|+ .+++.+.++++
T Consensus 288 ~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~----~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 288 WARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPE----FFNQIVLEECD 362 (365)
T ss_pred hhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHH----HHHHHHHHHHh
Confidence 112233444444 49999999999965 55556666665444568999999999999987774 46666766665
Q ss_pred H
Q 020630 313 E 313 (323)
Q Consensus 313 ~ 313 (323)
.
T Consensus 363 ~ 363 (365)
T KOG4409|consen 363 K 363 (365)
T ss_pred c
Confidence 3
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=192.49 Aligned_cols=230 Identities=14% Similarity=0.117 Sum_probs=157.6
Q ss_pred cceeEEecCCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-cCCCCCCCCCC
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-GRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~ 105 (323)
..++.+.+.|| +|+.+...|.+ ..+.++||++||++.+.. .+..+++.|+++||.|+.+|+||+ |+|++.....
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~- 86 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF- 86 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC-
Confidence 45677889999 99999998863 356789999999999765 689999999999999999999987 9997654322
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+......|+.+++++++.+. ..++.|+||||||.+|+.+|... . ++++|+.+|+..+.+.... .+....
T Consensus 87 t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~-v~~lI~~sp~~~l~d~l~~-----~~~~~~ 155 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--D-LSFLITAVGVVNLRDTLER-----ALGYDY 155 (307)
T ss_pred cccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--C-CCEEEEcCCcccHHHHHHH-----hhhccc
Confidence 44445799999999998763 45899999999999997777642 3 8999999998874421111 000000
Q ss_pred cccccccccCCCcc---ccccccc-ChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcc
Q 020630 186 FGLADTWAAMPDNK---MVGKAIK-DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 186 ~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
. .++...... +....+. ..........+.. ......+.++++++|+|+|||+.|.+
T Consensus 156 ~----~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~----------------~~~s~i~~~~~l~~PvLiIHG~~D~l 215 (307)
T PRK13604 156 L----SLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWD----------------TLDSTINKMKGLDIPFIAFTANNDSW 215 (307)
T ss_pred c----cCcccccccccccccccccHHHHHHHHHhcCcc----------------ccccHHHHHhhcCCCEEEEEcCCCCc
Confidence 0 000000000 0000000 0000000000000 00012244566789999999999999
Q ss_pred cCchhHHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
||.+.++.+++.+++.++++++++|++|.+.
T Consensus 216 Vp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 216 VKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred cCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 9999999999988656799999999999998
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-31 Score=210.97 Aligned_cols=260 Identities=10% Similarity=0.028 Sum_probs=154.5
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHH---HHHhcCCcEEEEeccccCcCCCCCCCC--CCChH--
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC---ISYATWGYAVFAADLLGHGRSDGIRCY--LGDME-- 108 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~~g~~vi~~d~~G~G~s~~~~~~--~~~~~-- 108 (323)
+.+| +|+|..+++.+....|+||++||++++.. .|..+. +.|...+|+||++|+||||.|+.+... .++++
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 3456 89999998643223567788888776655 454332 356656799999999999999755321 22333
Q ss_pred ---HHHhhHHH----HHHHHHhhCCCCCCC-EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHH
Q 020630 109 ---KVAASSLS----FFKHVRHSEPYRDLP-AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 109 ---~~~~d~~~----~i~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~ 180 (323)
.+++|+.+ +++.++.+ + ++|+||||||++|+.+|.++|++ |+++|++++....... .......
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~------~~~~lvG~S~GG~va~~~a~~~P~~-V~~Lvli~~~~~~~~~--~~~~~~~ 171 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIE------RLALVVGWSMGAQQTYHWAVRYPDM-VERAAPIAGTAKTTPH--NFVFLEG 171 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCC------ceEEEEEeCHHHHHHHHHHHHCHHH-HhhheeeecCCCCCHH--HHHHHHH
Confidence 24566655 55667654 7 47999999999999999999999 9999999876542111 0000000
Q ss_pred Hhhccc---cccccccc-CC----------------Cccccccc----cc----ChhhHHHhhcCCcccCCCCCchhHHH
Q 020630 181 MYGLLF---GLADTWAA-MP----------------DNKMVGKA----IK----DPEKLKVIASNPRRYTGKPRVGTMRE 232 (323)
Q Consensus 181 ~~~~~~---~~~~~~~~-~~----------------~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
....+. .+...+.. .+ ...+.... .. .............. ........
T Consensus 172 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 247 (339)
T PRK07581 172 LKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLP----RDPNNLLA 247 (339)
T ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcc----cCcccHHH
Confidence 000000 00000000 00 00000000 00 00000000000000 00011111
Q ss_pred HHH---------h---hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC-CCccccccCCchh
Q 020630 233 IAR---------V---CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG-MYHSLIQGEPDEN 299 (323)
Q Consensus 233 ~~~---------~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~ 299 (323)
... . ..+....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ +||..++++++
T Consensus 248 ~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~-- 323 (339)
T PRK07581 248 MLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNP-- 323 (339)
T ss_pred HHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcH--
Confidence 110 0 01234567789999999999999999999999998888 7899999998 99999987774
Q ss_pred HHHHHHHHHHHHHHHHh
Q 020630 300 ANLVLKDMREWIDERVE 316 (323)
Q Consensus 300 ~~~~~~~i~~fl~~~~~ 316 (323)
.+...|.+||.+.+.
T Consensus 324 --~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 324 --ADIAFIDAALKELLA 338 (339)
T ss_pred --HHHHHHHHHHHHHHh
Confidence 477777777777653
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=203.75 Aligned_cols=255 Identities=19% Similarity=0.153 Sum_probs=156.1
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC--CCChHHHHhh
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY--LGDMEKVAAS 113 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~d 113 (323)
+.+| ++.|...++.+ .+++|||+||++++....|..+...+.+.||+|+++|+||+|.|..+... .++++.++++
T Consensus 8 ~~~~~~~~~~~~~~~~--~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 8 TVDGGYHLFTKTGGEG--EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred cCCCCeEEEEeccCCC--CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 3455 78787776542 36899999998766553667777777666899999999999999865433 2589999999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc-ccc--
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG-LAD-- 190 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 190 (323)
+.++++.+..+ +++++||||||.+++.+|..+|++ |+++|++++.......... .......+.. ...
T Consensus 86 ~~~~~~~~~~~------~~~liG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 155 (288)
T TIGR01250 86 LEEVREKLGLD------KFYLLGHSWGGMLAQEYALKYGQH-LKGLIISSMLDSAPEYVKE---LNRLRKELPPEVRAAI 155 (288)
T ss_pred HHHHHHHcCCC------cEEEEEeehHHHHHHHHHHhCccc-cceeeEecccccchHHHHH---HHHHHhhcChhHHHHH
Confidence 99999887644 799999999999999999999998 9999999876532211000 0000000000 000
Q ss_pred -ccccC--CCc----ccccccc---------cChhhHHHhhcCCcc----cCCCCCchhHHHHHHhhHHHHhcCCccccc
Q 020630 191 -TWAAM--PDN----KMVGKAI---------KDPEKLKVIASNPRR----YTGKPRVGTMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 191 -~~~~~--~~~----~~~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 250 (323)
..... ... ....... ............... .......... ... ...+....+.++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~i~~P 233 (288)
T TIGR01250 156 KRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTIT-GNL-KDWDITDKLSEIKVP 233 (288)
T ss_pred HHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccccc-ccc-cccCHHHHhhccCCC
Confidence 00000 000 0000000 000000000000000 0000000000 000 000123456788999
Q ss_pred EEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++|++|.+ +++..+.+.+.+ +++++++++++||+.++++| +++.+.|.+||+
T Consensus 234 ~lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 288 (288)
T TIGR01250 234 TLLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDP----EVYFKLLSDFIR 288 (288)
T ss_pred EEEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCH----HHHHHHHHHHhC
Confidence 99999999985 567788888877 67899999999999997665 668888888873
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=206.77 Aligned_cols=284 Identities=12% Similarity=0.056 Sum_probs=170.5
Q ss_pred cCCccceeEEecCCC-cEEEEEecCC---CCCCceEEEEecCCCCCcch-hhHHHHHHHhcCCcEEEEeccccCcCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPL---DQKVKATVYMTHGYGSDTGW-MFQKICISYATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~---~~~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~ 100 (323)
..+.+++..+.+.|| .+.+..+.+. ....+|+||++||+++++.. .+..++..+.++||+|+++|+||||.|...
T Consensus 67 ~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 67 PAVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT 146 (388)
T ss_pred CCCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 445667788999999 7776554321 12347899999999876532 235566677778999999999999999754
Q ss_pred CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC-CeeEEEEccCccCCCCCC---chh-
Q 020630 101 RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENM---KPS- 175 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~il~~~~~~~~~~~---~~~- 175 (323)
.... .....++|+.++++++..+.+ ..+++++||||||.+++.++.+++++ .|.++++++++.+..... ...
T Consensus 147 ~~~~-~~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~ 223 (388)
T PLN02511 147 TPQF-YSASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGF 223 (388)
T ss_pred CcCE-EcCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccH
Confidence 3222 235667899999999998764 55899999999999999999998864 267877776654421000 000
Q ss_pred --HHHHHHhhcccccccc----cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccc
Q 020630 176 --KLHLFMYGLLFGLADT----WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 176 --~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
.....+...+...... +...................++......... ......+++... .....+.+|++
T Consensus 224 ~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~---gf~~~~~yy~~~-s~~~~L~~I~v 299 (388)
T PLN02511 224 NNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF---GFKSVDAYYSNS-SSSDSIKHVRV 299 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC---CCCCHHHHHHHc-CchhhhccCCC
Confidence 0000000000000000 0000000000000000111111110000000 111112222211 12456788999
Q ss_pred cEEEEeeCCCcccCchhH-HHHHHHhcCCCCcEEEecCCCccccccCCchh--HHHHHHHHHHHHHHHHhhc
Q 020630 250 PFLTVHGTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDEN--ANLVLKDMREWIDERVERC 318 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~--~~~~~~~i~~fl~~~~~~~ 318 (323)
|+|+|+|++|+++|.+.. ....+.. +++++++++++||..++++|+.. ...+.+.+.+||+......
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~ 369 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGK 369 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhc
Confidence 999999999999998754 3455555 78999999999999999887532 1235778888888776543
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=202.87 Aligned_cols=246 Identities=17% Similarity=0.182 Sum_probs=157.1
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+++|..+++. +.+|+|||+||++.+.. .|..+++.|.+ ||+|+++|+||||.|..... .++++++++++.++++.
T Consensus 1 ~~~~~~~g~~--~~~~~li~~hg~~~~~~-~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 1 RLHYRLDGAA--DGAPVLVFINSLGTDLR-MWDPVLPALTP-DFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDH 75 (251)
T ss_pred CceEEeecCC--CCCCeEEEEcCcccchh-hHHHHHHHhhc-ccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 3667777654 23789999999998877 88889888864 79999999999999975443 35899999999999998
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh-cccccccc-cccCCCc
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG-LLFGLADT-WAAMPDN 198 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ 198 (323)
+..+ +++++||||||.+++.+|.++|++ |+++|++++................... ........ .......
T Consensus 76 ~~~~------~v~liG~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR02427 76 LGIE------RAVFCGLSLGGLIAQGLAARRPDR-VRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTP 148 (251)
T ss_pred hCCC------ceEEEEeCchHHHHHHHHHHCHHH-hHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccc
Confidence 8643 899999999999999999999998 9999999876443221100000000000 00000000 0000000
Q ss_pred ccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcC
Q 020630 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS 276 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 276 (323)
.... .............. . ............ .......+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 149 ~~~~---~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-- 219 (251)
T TIGR02427 149 GFRE---AHPARLDLYRNMLV---R-QPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-- 219 (251)
T ss_pred cccc---CChHHHHHHHHHHH---h-cCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--
Confidence 0000 00000000000000 0 000000000000 01123456778999999999999999999888888887
Q ss_pred CCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 277 ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 277 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.++++++++||..++++| +.+.+.+.+|+
T Consensus 220 ~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl 250 (251)
T TIGR02427 220 PGARFAEIRGAGHIPCVEQP----EAFNAALRDFL 250 (251)
T ss_pred CCceEEEECCCCCcccccCh----HHHHHHHHHHh
Confidence 67899999999999997665 56788888886
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=207.73 Aligned_cols=258 Identities=12% Similarity=0.068 Sum_probs=154.7
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcch-----------hhHHHHH---HHhcCCcEEEEeccccCcCCCCCC
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-----------MFQKICI---SYATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~l~~~g~~vi~~d~~G~G~s~~~~ 101 (323)
..+| +++|..+|+.+ .| +||+||++++... .|..+.. .|...+|+||++|+||||.|...
T Consensus 42 ~~~~~~l~y~~~G~~~---~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~- 116 (343)
T PRK08775 42 GLEDLRLRYELIGPAG---AP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV- 116 (343)
T ss_pred CCCCceEEEEEeccCC---CC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC-
Confidence 3367 89999988632 34 6666665555431 4777775 56434699999999999988532
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHH
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~ 181 (323)
.++.+++++|+.++++.++.+ ..++|+||||||++|+.+|.++|++ |+++|++++....... ...+ ...
T Consensus 117 --~~~~~~~a~dl~~ll~~l~l~-----~~~~lvG~SmGG~vA~~~A~~~P~~-V~~LvLi~s~~~~~~~-~~~~--~~~ 185 (343)
T PRK08775 117 --PIDTADQADAIALLLDALGIA-----RLHAFVGYSYGALVGLQFASRHPAR-VRTLVVVSGAHRAHPY-AAAW--RAL 185 (343)
T ss_pred --CCCHHHHHHHHHHHHHHcCCC-----cceEEEEECHHHHHHHHHHHHChHh-hheEEEECccccCCHH-HHHH--HHH
Confidence 247889999999999998754 1357999999999999999999999 9999999986543211 0011 000
Q ss_pred hhcccccccccccCCCc-cccc----ccccC-hhhHHHhhcCCc-------------------ccCCCCCchhHHHHHHh
Q 020630 182 YGLLFGLADTWAAMPDN-KMVG----KAIKD-PEKLKVIASNPR-------------------RYTGKPRVGTMREIARV 236 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~-~~~~----~~~~~-~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 236 (323)
................. .... ..... ......+..... ..........+..+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T PRK08775 186 QRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSES 265 (343)
T ss_pred HHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHH
Confidence 00000000000000000 0000 00000 000000000000 00000000001111111
Q ss_pred hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC-CCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.......+.++++|+|+|+|++|.++|++..+.+.+.+. ++++++++++ +||..++++| +++++.|.+||.+.-
T Consensus 266 ~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~P----e~~~~~l~~FL~~~~ 340 (343)
T PRK08775 266 IDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKET----DRIDAILTTALRSTG 340 (343)
T ss_pred HhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCH----HHHHHHHHHHHHhcc
Confidence 110122467899999999999999999998888888763 4789999985 9999997766 669999999997653
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=199.97 Aligned_cols=250 Identities=14% Similarity=0.161 Sum_probs=153.1
Q ss_pred CCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHH
Q 020630 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +++|.. |. +.+|+|||+||++.+.. .|..+...|.++||+|+++|+||||.|........+++++++++.+
T Consensus 4 ~~~~~~~~~~--~~--~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMK--PN--RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccc--cc--CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 467 777665 32 34789999999998866 8999999998889999999999999886544333589999999999
Q ss_pred HHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc----c
Q 020630 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT----W 192 (323)
Q Consensus 117 ~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 192 (323)
+++.+.. ..+++|+||||||.+++.++..+|++ |+++|++++................. ......... +
T Consensus 79 ~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~-v~~lv~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 151 (273)
T PLN02211 79 FLSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKK-ICLAVYVAATMLKLGFQTDEDMKDGV-PDLSEFGDVYELGF 151 (273)
T ss_pred HHHhcCC-----CCCEEEEEECchHHHHHHHHHhChhh-eeEEEEeccccCCCCCCHHHHHhccc-cchhhhccceeeee
Confidence 9988742 23899999999999999999999998 99999998753211110000000000 000000000 0
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcc--------cCCCCCchhHHHHHHhhHHHHhcCCcc-cccEEEEeeCCCcccC
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRR--------YTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVHGTADGVTC 263 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~ 263 (323)
........................+... .........+.. ....+...++ ++|+++|.|++|..+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~vP~l~I~g~~D~~ip 226 (273)
T PLN02211 152 GLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRS-----ARFEEETGDIDKVPRVYIKTLHDHVVK 226 (273)
T ss_pred ccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCcccccc-----ccccccccccCccceEEEEeCCCCCCC
Confidence 0000000000000000001110000000 000000000000 0011223344 7899999999999999
Q ss_pred chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.++.+.+.+ +..+++.++ +||.+++++|++ +.+.|.++.
T Consensus 227 ~~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~----~~~~i~~~a 267 (273)
T PLN02211 227 PEQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFL----LFGLLIKAA 267 (273)
T ss_pred HHHHHHHHHhC--CccEEEEEC-CCCCccccCHHH----HHHHHHHHH
Confidence 99999999988 567889997 899999888854 555555543
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=199.68 Aligned_cols=230 Identities=14% Similarity=0.158 Sum_probs=142.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+|+|||+||++++.. .|..+++.| + +|+|+++|+||||.|..+.. .+++++++|+.++++.+..+ ++++
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~~------~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNIL------PYWL 70 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCCC------CeEE
Confidence 578999999998876 899999988 3 59999999999999986543 38999999999999987643 8999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc-----ccCCCcccccccccChh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW-----AAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 209 (323)
+||||||.+|+.+|.++|+..|++++++++.......................+.... ........... .....
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNAEQ 149 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCccH
Confidence 9999999999999999865339999998876543221100000000000000000000 00000000000 00000
Q ss_pred hHHHhhcCCcccCCCCCchhHHHHHHh-----hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEe
Q 020630 210 KLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
........... ........... ..+..+.+.++++|+++++|++|..+. .+.+. .+++++++
T Consensus 150 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i 216 (242)
T PRK11126 150 RQQLVAKRSNN-----NGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVI 216 (242)
T ss_pred HHHHHHhcccC-----CHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEe
Confidence 01111000000 00001111110 112345677899999999999998542 23332 36899999
Q ss_pred cCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++||++++++| +++.+.|.+|+.+
T Consensus 217 ~~~gH~~~~e~p----~~~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHRENP----AAFAASLAQILRL 241 (242)
T ss_pred CCCCCchhhhCh----HHHHHHHHHHHhh
Confidence 999999997666 5688888888864
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=198.76 Aligned_cols=234 Identities=16% Similarity=0.205 Sum_probs=145.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+|+|||+||++++.. .|..+++.|.+ +|+|+++|+||+|.|..... .+++++++++.+.+ ..++++
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~----------~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA----------PDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC----------CCCeEE
Confidence 479999999998877 89999999976 59999999999999875432 36777776665432 238999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC--c---hhHHHHHHhhcccc-cccccccCCCcccccccccCh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--K---PSKLHLFMYGLLFG-LADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 208 (323)
+||||||.+++.+|.++|++ ++++|++++........ . .......+...+.. .....................
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDR-VRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQ 148 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHh-hheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccch
Confidence 99999999999999999998 99999998765432111 0 00001000000000 000000000000000000000
Q ss_pred hhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC
Q 020630 209 EKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
......... ... ............... .+....+.++++|+++++|++|.++|.+..+.+.+.+ ++++++++++
T Consensus 149 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~ 224 (245)
T TIGR01738 149 DARALKQTL-LAR-PTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFAK 224 (245)
T ss_pred HHHHHHHHh-hcc-CCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeCC
Confidence 000000000 000 000011111111111 1233456788999999999999999999988888888 7899999999
Q ss_pred CCccccccCCchhHHHHHHHHHHHH
Q 020630 287 MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+||++++++| +++.+.|.+|+
T Consensus 225 ~gH~~~~e~p----~~~~~~i~~fi 245 (245)
T TIGR01738 225 AAHAPFLSHA----EAFCALLVAFK 245 (245)
T ss_pred CCCCccccCH----HHHHHHHHhhC
Confidence 9999997666 66888888874
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=206.51 Aligned_cols=261 Identities=15% Similarity=0.193 Sum_probs=158.7
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcch----------hhHHHH---HHHhcCCcEEEEecccc--CcCCCCC
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW----------MFQKIC---ISYATWGYAVFAADLLG--HGRSDGI 100 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~----------~~~~~~---~~l~~~g~~vi~~d~~G--~G~s~~~ 100 (323)
..+| +|+|..+++.+...+++|||+||++++... .|..++ ..|..++|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 3466 899999997432346799999999987521 366664 35555689999999999 5555421
Q ss_pred ----C-------CCCCChHHHHhhHHHHHHHHHhhCCCCCCC-EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 101 ----R-------CYLGDMEKVAASSLSFFKHVRHSEPYRDLP-AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 101 ----~-------~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
. ...++++++++++.++++.++.. + ++++||||||.+++.+|.++|++ |+++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~l~G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE------QIAAVVGGSMGGMQALEWAIDYPER-VRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHh-hheEEEEccCCcC
Confidence 1 11358899999999999998754 6 99999999999999999999999 9999999986643
Q ss_pred CCCCchhHHHHHHhhccc---cccc-ccccC--CCc-----ccccc--cccChhhHHHhhcCCcc---------------
Q 020630 169 PENMKPSKLHLFMYGLLF---GLAD-TWAAM--PDN-----KMVGK--AIKDPEKLKVIASNPRR--------------- 220 (323)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~---~~~~-~~~~~--~~~-----~~~~~--~~~~~~~~~~~~~~~~~--------------- 220 (323)
...... +. ......+. .... .+... +.. ..... ..........+......
T Consensus 165 ~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T TIGR01392 165 SAWCIA-FN-EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVE 242 (351)
T ss_pred CHHHHH-HH-HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHH
Confidence 321100 10 00000000 0000 00000 000 00000 00000000000000000
Q ss_pred ---------cCCCCCchhHHHHHHhh---------HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEE
Q 020630 221 ---------YTGKPRVGTMREIARVC---------QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK 282 (323)
Q Consensus 221 ---------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
................. .+..+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++.++.
T Consensus 243 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~ 320 (351)
T TIGR01392 243 SYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLR 320 (351)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCc
Confidence 00000000000111111 1124567889999999999999999999999999999 556554
Q ss_pred -----EecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 283 -----IYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 283 -----~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++||.+++++| +++.+.|.+||+
T Consensus 321 v~~~~i~~~~GH~~~le~p----~~~~~~l~~FL~ 351 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVET----DQVEELIRGFLR 351 (351)
T ss_pred eEEEEeCCCCCcchhhcCH----HHHHHHHHHHhC
Confidence 56789999997666 668888988873
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=204.38 Aligned_cols=264 Identities=13% Similarity=0.117 Sum_probs=159.3
Q ss_pred CC-cEEEEEecCCCCCCceEEEEecCCCCCcch------------hhHHHHH---HHhcCCcEEEEeccccC-cCCCCCC
Q 020630 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW------------MFQKICI---SYATWGYAVFAADLLGH-GRSDGIR 101 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------~~~~~~~---~l~~~g~~vi~~d~~G~-G~s~~~~ 101 (323)
+| +++|..+|..+...+|+|||+||++++... .|..++. .|...+|+||++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 45 789999986432346899999999988651 2555542 34345799999999983 5453321
Q ss_pred C-------------CCCChHHHHhhHHHHHHHHHhhCCCCCCC-EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 102 C-------------YLGDMEKVAASSLSFFKHVRHSEPYRDLP-AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 102 ~-------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
. ..++++++++++.++++.++.+ + ++++||||||.+++.+|.++|++ |+++|++++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 183 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT------RLAAVVGGSMGGMQALEWAIDYPDR-VRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC------CceEEEEECHHHHHHHHHHHhChHh-hhEEEEECCCcc
Confidence 0 1358999999999999999865 6 58999999999999999999999 999999997664
Q ss_pred CCCCCchhHHH--HHHhhcccccccc-cc---cCCCccc-ccc-----cccC-hhhHHHhhcCC----------------
Q 020630 168 IPENMKPSKLH--LFMYGLLFGLADT-WA---AMPDNKM-VGK-----AIKD-PEKLKVIASNP---------------- 218 (323)
Q Consensus 168 ~~~~~~~~~~~--~~~~~~~~~~~~~-~~---~~~~~~~-~~~-----~~~~-~~~~~~~~~~~---------------- 218 (323)
...... .+.. .........+... +. ....... ... .... ......+....
T Consensus 184 ~~~~~~-~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 262 (379)
T PRK00175 184 LSAQNI-AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVE 262 (379)
T ss_pred cCHHHH-HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHH
Confidence 322110 0100 0000000000000 00 0000000 000 0000 00000000000
Q ss_pred -------cccCCCCCchhHHHHHHhh----------HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCC--
Q 020630 219 -------RRYTGKPRVGTMREIARVC----------QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADK-- 279 (323)
Q Consensus 219 -------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-- 279 (323)
................... .+..+.+.+|++|+|+|+|++|.++|++.++.+.+.+ +++
T Consensus 263 ~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i--~~a~~ 340 (379)
T PRK00175 263 SYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL--LAAGA 340 (379)
T ss_pred HHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH--HhcCC
Confidence 0000000000000111110 0134567889999999999999999999999999999 444
Q ss_pred --cEEEec-CCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 280 --SIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 280 --~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++++++ ++||..++++| +++++.|.+||.+...
T Consensus 341 ~~~l~~i~~~~GH~~~le~p----~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 341 DVSYAEIDSPYGHDAFLLDD----PRYGRLVRAFLERAAR 376 (379)
T ss_pred CeEEEEeCCCCCchhHhcCH----HHHHHHHHHHHHhhhh
Confidence 677775 89999997776 5689999999987643
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-29 Score=197.50 Aligned_cols=246 Identities=17% Similarity=0.139 Sum_probs=150.2
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~ 108 (323)
...++...+| +++|..+++.+ +++|||+||++++.. . ..+...+...+|+|+++|+||||.|..... ...+.+
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 79 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGT-D-PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTW 79 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCC-C-HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHH
Confidence 3456777788 99999887543 568999999887654 2 234445555689999999999999986542 234678
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH---------H
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---------L 179 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~---------~ 179 (323)
++++|+..++++++.+ +++++||||||.+++.++.++|++ |+++|++++....+... .+.. .
T Consensus 80 ~~~~dl~~l~~~l~~~------~~~lvG~S~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~ 150 (306)
T TIGR01249 80 DLVADIEKLREKLGIK------NWLVFGGSWGSTLALAYAQTHPEV-VTGLVLRGIFLLREKEW--SWFYEGGASMIYPD 150 (306)
T ss_pred HHHHHHHHHHHHcCCC------CEEEEEECHHHHHHHHHHHHChHh-hhhheeeccccCCHHHH--HHHHhcchhhhCHH
Confidence 8999999999888643 799999999999999999999998 99999998765422110 0000 0
Q ss_pred HHhhcccccccccc-cCCCcccccccccCh-hh----H----HHhhcCCcccCC-----CCCchhHHHHHH------h--
Q 020630 180 FMYGLLFGLADTWA-AMPDNKMVGKAIKDP-EK----L----KVIASNPRRYTG-----KPRVGTMREIAR------V-- 236 (323)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~----~----~~~~~~~~~~~~-----~~~~~~~~~~~~------~-- 236 (323)
.+..+......... ......+........ .. . .+.......... .........+.. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (306)
T TIGR01249 151 AWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNK 230 (306)
T ss_pred HHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHh
Confidence 00001000000000 000000000000000 00 0 000000000000 000000111100 0
Q ss_pred -----hHHHHhcCCcc-cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 237 -----CQYIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 237 -----~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
.......+.++ ++|+++|+|++|.++|.+.++.+++.+ +++++++++++||..+
T Consensus 231 ~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 231 GFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAF 290 (306)
T ss_pred chhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCC
Confidence 11123455667 699999999999999999999999998 7789999999999997
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=199.10 Aligned_cols=220 Identities=25% Similarity=0.354 Sum_probs=146.7
Q ss_pred EEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEE
Q 020630 58 VYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFG 136 (323)
Q Consensus 58 vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G 136 (323)
|||+||++++.. .|..+++.|+ +||+|+++|+||+|.|..... ...+++++++|+.++++.+..+ +++++|
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK------KVILVG 72 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS------SEEEEE
T ss_pred eEEECCCCCCHH-HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc------cccccc
Confidence 799999999886 8999999995 689999999999999987553 2358899999999999998864 899999
Q ss_pred echhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhc
Q 020630 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS 216 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (323)
||+||.+++.++.++|++ |+++|+++|................+............... ...................
T Consensus 73 ~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 150 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDR-VKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA-SRFFYRWFDGDEPEDLIRS 150 (228)
T ss_dssp ETHHHHHHHHHHHHSGGG-EEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTHHHHHHHHHH
T ss_pred cccccccccccccccccc-cccceeecccccccccccccccchhhhhhhhcccccccccc-ccccccccccccccccccc
Confidence 999999999999999998 99999999877532111000000001100000000000000 0000000001111111111
Q ss_pred CCcccCCCCCchhHHHHHH---hhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccc
Q 020630 217 NPRRYTGKPRVGTMREIAR---VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
.......... ...+....+.++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||++++
T Consensus 151 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 151 ---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHFLFL 219 (228)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSSTHHH
T ss_pred ---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCccHH
Confidence 0111111111 223345667788999999999999999988888888888 78999999999999997
Q ss_pred cCCch
Q 020630 294 GEPDE 298 (323)
Q Consensus 294 ~~~~~ 298 (323)
++|++
T Consensus 220 ~~p~~ 224 (228)
T PF12697_consen 220 EQPDE 224 (228)
T ss_dssp HSHHH
T ss_pred HCHHH
Confidence 77644
|
... |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=195.39 Aligned_cols=270 Identities=20% Similarity=0.193 Sum_probs=167.8
Q ss_pred ceeEEecCCC--cEEEEEecCC------CCCCceEEEEecCCCCCcchhhHHHHHHHhcC-CcEEEEeccccCc-CCCCC
Q 020630 31 GKEYFETPNG--KLFTQSFLPL------DQKVKATVYMTHGYGSDTGWMFQKICISYATW-GYAVFAADLLGHG-RSDGI 100 (323)
Q Consensus 31 ~~~~~~~~~g--~l~~~~~~~~------~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G-~s~~~ 100 (323)
....+....| .+....++.. +...+++||++||++++.. .|+.....|.++ |+.|+++|++|+| .|..+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~ 104 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP 104 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcCCCCC
Confidence 3344555555 5555555443 1135899999999999665 999999988876 5999999999999 55555
Q ss_pred CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEE---EccCccCCCCCCchhH-
Q 020630 101 RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLI---FSAPLFVIPENMKPSK- 176 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~i---l~~~~~~~~~~~~~~~- 176 (323)
....++..++++-+..+....... +++++|||+||.+|+.+|+.+|+. |+++| ++++............
T Consensus 105 ~~~~y~~~~~v~~i~~~~~~~~~~------~~~lvghS~Gg~va~~~Aa~~P~~-V~~lv~~~~~~~~~~~~~~~~~~~~ 177 (326)
T KOG1454|consen 105 RGPLYTLRELVELIRRFVKEVFVE------PVSLVGHSLGGIVALKAAAYYPET-VDSLVLLDLLGPPVYSTPKGIKGLR 177 (326)
T ss_pred CCCceehhHHHHHHHHHHHhhcCc------ceEEEEeCcHHHHHHHHHHhCccc-ccceeeecccccccccCCcchhHHH
Confidence 555578888888888887777644 799999999999999999999999 99999 5655554333221111
Q ss_pred -HHHHHhhcccccccccccCCCc----ccccccc----c-ChhhHHHhhcCCc----ccCCCCCchhHHHHHHhhHHHHh
Q 020630 177 -LHLFMYGLLFGLADTWAAMPDN----KMVGKAI----K-DPEKLKVIASNPR----RYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
.............+........ .+..... . ............. .......................
T Consensus 178 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T KOG1454|consen 178 RLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLS 257 (326)
T ss_pred HhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHH
Confidence 1111111111111110000000 0000000 0 0000000000000 00000000000000000011234
Q ss_pred cCCccc-ccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 243 NFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++++. ||+++++|++|.++|.+.++.+.+.+ +++++.+++++||.+++++| +.++..|..|+.+.
T Consensus 258 ~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~P----e~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 258 LIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERP----EEVAALLRSFIARL 324 (326)
T ss_pred hhccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCH----HHHHHHHHHHHHHh
Confidence 556665 99999999999999999999999988 89999999999999996555 67999999999865
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=194.67 Aligned_cols=233 Identities=17% Similarity=0.221 Sum_probs=145.5
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChHHHHhh-HHHHHHHHHhhCCCCCCCE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAAS-SLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~i~~l~~~~~~~~~~~ 132 (323)
+|+||++||++++.. .|..+++.|+ +||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.+. ..++
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG------IEPF 72 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC------CCeE
Confidence 478999999998877 8999999998 689999999999999976543 33477888888 666666664 3489
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHH---Hhhcc-----cccccccccCCCcccccc-
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF---MYGLL-----FGLADTWAAMPDNKMVGK- 203 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~- 203 (323)
+++|||+||.+++.+|.++|+. |++++++++................ ....+ ..+...+... .....
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 148 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPER-VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQ---PLFASQ 148 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchh-eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcC---ceeeec
Confidence 9999999999999999999998 9999999886543321111000000 00000 0000000000 00000
Q ss_pred -cccChhhHHHhhcCCcccCCCCCchhHHHHHHh-----hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCC
Q 020630 204 -AIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
................. ........... .......+.++++|+++++|++|..++ +..+.+.+.. +
T Consensus 149 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~ 220 (251)
T TIGR03695 149 KNLPPEQRQALRAKRLAN-----NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--P 220 (251)
T ss_pred ccCChHHhHHHHHhcccc-----cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--C
Confidence 00000000011100000 00011111110 011234467789999999999998764 4556666666 7
Q ss_pred CCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++++++++++||++++++| +++.+.|.+|+
T Consensus 221 ~~~~~~~~~~gH~~~~e~~----~~~~~~i~~~l 250 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLENP----EAFAKILLAFL 250 (251)
T ss_pred CCcEEEEcCCCCCcCccCh----HHHHHHHHHHh
Confidence 7899999999999997666 56888888887
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=196.07 Aligned_cols=247 Identities=15% Similarity=0.156 Sum_probs=161.7
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
.+.+.+...++..+| .|.++.+.|...++.|+||++||+++.....|..+++.|+++||+|+++|+||+|.|..... .
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~ 242 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-T 242 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-c
Confidence 444567888899999 99999998875466788888888776543367788899999999999999999999965321 1
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+.... ..++++++.....++..+++++||||||++++.+|..+|++ |+++|++++......... .+ ...+...
T Consensus 243 ~d~~~~---~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~r-i~a~V~~~~~~~~~~~~~-~~-~~~~p~~ 316 (414)
T PRK05077 243 QDSSLL---HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPR-LKAVACLGPVVHTLLTDP-KR-QQQVPEM 316 (414)
T ss_pred ccHHHH---HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcC-ceEEEEECCccchhhcch-hh-hhhchHH
Confidence 123222 24566666655444567999999999999999999998988 999999988754110000 00 0000000
Q ss_pred ccc-cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcC-CcccccEEEEeeCCCccc
Q 020630 185 LFG-LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF-SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~ 262 (323)
... +....... ..........+ ..........+ .++++|+|+|+|++|.++
T Consensus 317 ~~~~la~~lg~~--------~~~~~~l~~~l-------------------~~~sl~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 317 YLDVLASRLGMH--------DASDEALRVEL-------------------NRYSLKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHHHHhCCC--------CCChHHHHHHh-------------------hhccchhhhhhccCCCCcEEEEecCCCCCC
Confidence 000 00000000 00000000000 00000000111 568999999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+.++.+.+.. ++.++++++++ .+. +..+++.+.+.+||.+++
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~----e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVY----RNFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---Ccc----CCHHHHHHHHHHHHHHHh
Confidence 999999888777 78899999986 232 245779999999998875
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=197.66 Aligned_cols=260 Identities=18% Similarity=0.147 Sum_probs=143.7
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHH----HHhhHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK----VAASSLS 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~----~~~d~~~ 116 (323)
++.+..+.+. ..+|+|||+||++++.. .|...++.|+++ |+|+++|+||||.|+.+.....+.++ +++++.+
T Consensus 93 ~~~~~~~~~~--~~~p~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 93 FINTVTFDSK--EDAPTLVMVHGYGASQG-FFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred eEEEEEecCC--CCCCEEEEECCCCcchh-HHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 3444444322 35789999999998776 677777888764 99999999999999765422122222 3455555
Q ss_pred HHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH--------HHHhhcc--c
Q 020630 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH--------LFMYGLL--F 186 (323)
Q Consensus 117 ~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~--------~~~~~~~--~ 186 (323)
+++.+. ..+++++||||||.+++.+|.++|++ |+++|+++|.............. ..+...+ .
T Consensus 169 ~~~~l~------~~~~~lvGhS~GG~la~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (402)
T PLN02894 169 WRKAKN------LSNFILLGHSFGGYVAAKYALKHPEH-VQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWES 241 (402)
T ss_pred HHHHcC------CCCeEEEEECHHHHHHHHHHHhCchh-hcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhc
Confidence 555543 33899999999999999999999998 99999998865433221110000 0000000 0
Q ss_pred ccccccccC---C-Cccccccc-------------ccChhhHHHhhcCCcccCCCCCchhHHHHH-----HhhHHHHhcC
Q 020630 187 GLADTWAAM---P-DNKMVGKA-------------IKDPEKLKVIASNPRRYTGKPRVGTMREIA-----RVCQYIQDNF 244 (323)
Q Consensus 187 ~~~~~~~~~---~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 244 (323)
.+.+..... + ...+.... .............................. ....+....+
T Consensus 242 ~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 321 (402)
T PLN02894 242 NFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESA 321 (402)
T ss_pred CCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhc
Confidence 000000000 0 00000000 000000000000000000000000000000 0112244567
Q ss_pred CcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.++++|+++|+|++|.+.+ .....+.+... +.+++++++++||+.++++|+++.+.+.+.+..|++.
T Consensus 322 ~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 322 SEWKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred ccCCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 8889999999999998765 55555555552 3588999999999999888866444444444444443
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=192.58 Aligned_cols=281 Identities=11% Similarity=0.086 Sum_probs=165.8
Q ss_pred cCCccceeEEecCCC-cEEEEEec-CCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFL-PLDQKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~-~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~ 102 (323)
..+......+.+.|| .+.+.... +.....+|+||++||++++.. .....+++.|.++||+|+++|+||||.++....
T Consensus 27 ~~~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 27 VLFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred CCCCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc
Confidence 445566777899999 66554332 222245789999999987643 234668889999999999999999998764322
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC-CeeEEEEccCccCCCCCCch---h---
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENMKP---S--- 175 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~il~~~~~~~~~~~~~---~--- 175 (323)
..+. ....+|+..+++++..+.+ ..+++++||||||.+++.++..+++. .+.++|+++++......... .
T Consensus 107 ~~~~-~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~ 183 (324)
T PRK10985 107 RIYH-SGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSR 183 (324)
T ss_pred ceEC-CCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHH
Confidence 2112 2235788888888877644 45899999999999988888776542 38888888887653211100 0
Q ss_pred HHHHHHhhccc-ccccccccCCCccc--ccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEE
Q 020630 176 KLHLFMYGLLF-GLADTWAAMPDNKM--VGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.....+...+. .............. ...........++...... .........+++.... ....++++++|++
T Consensus 184 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~---~~~g~~~~~~~y~~~~-~~~~l~~i~~P~l 259 (324)
T PRK10985 184 VYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITA---RIHGFADAIDYYRQCS-ALPLLNQIRKPTL 259 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhhee---ccCCCCCHHHHHHHCC-hHHHHhCCCCCEE
Confidence 00000000000 00000000000000 0000000001111101011 1111222233333322 3466788999999
Q ss_pred EEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCc-hhHHHHHHHHHHHHHHHH
Q 020630 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD-ENANLVLKDMREWIDERV 315 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~~ 315 (323)
+|+|++|++++++....+.+.. +++++.+++++||+.+++..- ......-+.+.+|+....
T Consensus 260 ii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred EEecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 9999999999988777776555 678999999999999986531 112346677888887654
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=199.94 Aligned_cols=244 Identities=19% Similarity=0.213 Sum_probs=153.4
Q ss_pred CC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHH
Q 020630 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
++ +++|..+++.+ +++|||+||++++.. .|..+...|.+. |+|+++|+||||.|..... ..+++++++++.++
T Consensus 117 ~~~~i~~~~~g~~~---~~~vl~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~ 190 (371)
T PRK14875 117 GGRTVRYLRLGEGD---GTPVVLIHGFGGDLN-NWLFNHAALAAG-RPVIALDLPGHGASSKAVG-AGSLDELAAAVLAF 190 (371)
T ss_pred cCcEEEEecccCCC---CCeEEEECCCCCccc-hHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHH
Confidence 45 78887776533 689999999998877 888888888765 9999999999999965433 34899999999999
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc--ccccccccccC
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL--LFGLADTWAAM 195 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 195 (323)
++.+.. .+++++|||+||.+++.+|..+|++ ++++|++++........ ..+ ...+... ...+.......
T Consensus 191 ~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~~~~-v~~lv~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 191 LDALGI------ERAHLVGHSMGGAVALRLAARAPQR-VASLTLIAPAGLGPEIN-GDY-IDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHhcCC------ccEEEEeechHHHHHHHHHHhCchh-eeEEEEECcCCcCcccc-hhH-HHHhhcccchhHHHHHHHHH
Confidence 988753 3899999999999999999999988 99999998764322111 111 0000000 00000000000
Q ss_pred CCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh-------hHHHHhcCCcccccEEEEeeCCCcccCchhHH
Q 020630 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
... .................. .........+... ..+....+.++++|+++++|++|.++|++.++
T Consensus 262 ~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~ 334 (371)
T PRK14875 262 FAD---PALVTRQMVEDLLKYKRL----DGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ 334 (371)
T ss_pred hcC---hhhCCHHHHHHHHHHhcc----ccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHh
Confidence 000 000000000000000000 0000000000000 01233456678999999999999999987654
Q ss_pred HHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 269 LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+. .++++.+++++||+.++++| +++.+.|.+||++
T Consensus 335 ~l~-----~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~~ 370 (371)
T PRK14875 335 GLP-----DGVAVHVLPGAGHMPQMEAA----ADVNRLLAEFLGK 370 (371)
T ss_pred hcc-----CCCeEEEeCCCCCChhhhCH----HHHHHHHHHHhcc
Confidence 432 45789999999999997665 6688888899864
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=177.71 Aligned_cols=256 Identities=16% Similarity=0.203 Sum_probs=154.9
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCC----cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSD----TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
..+. .+| .+....+.|.+ ..++.||++||++.. .. .+..+++.|+++||+|+++|+||||.|.+.. .++
T Consensus 5 ~~~~-~~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~ 78 (274)
T TIGR03100 5 LTFS-CEGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGF 78 (274)
T ss_pred EEEE-cCCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCH
Confidence 3444 345 88888888765 345677777876532 22 4567889999999999999999999987542 367
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+++.+|+.++++.+....+ ...+++++||||||.+++.+|... .. |+++|+++|+......................
T Consensus 79 ~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~~-~~-v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T TIGR03100 79 EGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPAD-LR-VAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS 155 (274)
T ss_pred HHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhhC-CC-ccEEEEECCccCCcccchHHHHHHHHHHHHhC
Confidence 8888999999999976531 024799999999999999998653 45 99999999875433221111110100000000
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCccc--CCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRY--TGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
. ..+.. +.............+....... ........ .........+..+++|+++++|.+|...+ .
T Consensus 156 ~-~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~ 223 (274)
T TIGR03100 156 A-DFWRK-----LLSGEVNLGSSLRGLGDALLKARQKGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ-E 223 (274)
T ss_pred h-HHHHH-----hcCCCccHHHHHHHHHHHHHhhhhcCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH-H
Confidence 0 00000 0000000000000000000000 00000000 02223445566779999999999998763 2
Q ss_pred hH------HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 266 SS------KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 266 ~~------~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.. ..+.+.+..+++++..+++++|++.. +...+++.+.|.+||+
T Consensus 224 ~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~---e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 224 FADSVLGEPAWRGALEDPGIERVEIDGADHTFSD---RVWREWVAARTTEWLR 273 (274)
T ss_pred HHHHhccChhhHHHhhcCCeEEEecCCCCccccc---HHHHHHHHHHHHHHHh
Confidence 21 34444454578999999999998862 4556889999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=220.13 Aligned_cols=245 Identities=16% Similarity=0.167 Sum_probs=155.0
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-------CCCCChHHHHhhHHHHHHHHHhhCC
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-------CYLGDMEKVAASSLSFFKHVRHSEP 126 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~i~~l~~~~~ 126 (323)
.+++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|.... ...++++.+++++.++++.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC--
Confidence 4689999999999987 899999999764 999999999999997532 12357899999999999987643
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH---HHhhcc-----cccccccccCCCc
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL---FMYGLL-----FGLADTWAAMPDN 198 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~ 198 (323)
+++|+||||||.+++.++.++|++ |+++|++++............... .....+ ..+...+ ...
T Consensus 1446 ----~v~LvGhSmGG~iAl~~A~~~P~~-V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~ 1517 (1655)
T PLN02980 1446 ----KVTLVGYSMGARIALYMALRFSDK-IEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENW---YSG 1517 (1655)
T ss_pred ----CEEEEEECHHHHHHHHHHHhChHh-hCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHh---ccH
Confidence 899999999999999999999999 999999987543322111000000 000000 0000000 000
Q ss_pred ccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh-----hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHH
Q 020630 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.........+.......... .. ............ ..+..+.+.++++|+|+|+|++|..++ +.+..+.+.
T Consensus 1518 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~ 1592 (1655)
T PLN02980 1518 ELWKSLRNHPHFNKIVASRL---LH-KDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYRE 1592 (1655)
T ss_pred HHhhhhccCHHHHHHHHHHH---hc-CCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHH
Confidence 00000000000111110000 00 000011111111 112345678899999999999999875 566677777
Q ss_pred hcCC----------CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhcC
Q 020630 274 ASSA----------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCG 319 (323)
Q Consensus 274 ~~~~----------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 319 (323)
++.. .+++++++++||.+++++| +.+.+.|.+||.+......
T Consensus 1593 i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~P----e~f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1593 IGKSKESGNDKGKEIIEIVEIPNCGHAVHLENP----LPVIRALRKFLTRLHNSST 1644 (1655)
T ss_pred ccccccccccccccceEEEEECCCCCchHHHCH----HHHHHHHHHHHHhccccCC
Confidence 6321 2589999999999997666 6699999999998654443
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=172.58 Aligned_cols=259 Identities=16% Similarity=0.161 Sum_probs=172.4
Q ss_pred cEEEEEe-cCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHH
Q 020630 41 KLFTQSF-LPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~-~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i 118 (323)
++.|..+ ...+....|+++++||+.++.. .|..+...|+.. |-.|+++|.|.||.|+..... +.+.+++|+..+|
T Consensus 37 ~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~Fi 113 (315)
T KOG2382|consen 37 RLAYDSVYSSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLFI 113 (315)
T ss_pred ccceeeeecccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHHH
Confidence 5666665 4433456899999999999987 999999999876 789999999999999877665 6899999999999
Q ss_pred HHHHhhCCCCCCCEEEEEechhH-HHHHHHHhhcCCCCeeEEEEccCccC-CCCCCchhHHHHHHhhcccccccccccCC
Q 020630 119 KHVRHSEPYRDLPAFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFV-IPENMKPSKLHLFMYGLLFGLADTWAAMP 196 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~il~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (323)
+..+.... ..+++++|||||| .+++..+...|+. +..+|++.-... ......... .+...+...........
T Consensus 114 ~~v~~~~~--~~~~~l~GHsmGG~~~~m~~t~~~p~~-~~rliv~D~sP~~~~~~~~e~~---e~i~~m~~~d~~~~~~~ 187 (315)
T KOG2382|consen 114 DGVGGSTR--LDPVVLLGHSMGGVKVAMAETLKKPDL-IERLIVEDISPGGVGRSYGEYR---ELIKAMIQLDLSIGVSR 187 (315)
T ss_pred HHcccccc--cCCceecccCcchHHHHHHHHHhcCcc-cceeEEEecCCccCCcccchHH---HHHHHHHhccccccccc
Confidence 99974321 3489999999999 7777778888998 888887654432 222221111 11111111111100001
Q ss_pred Cc----ccccccccChhhHHHhhcCCcc------cCCCCCchhHHHHHHhh--HHHHhcC--CcccccEEEEeeCCCccc
Q 020630 197 DN----KMVGKAIKDPEKLKVIASNPRR------YTGKPRVGTMREIARVC--QYIQDNF--SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 197 ~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~P~l~i~g~~D~~~ 262 (323)
.. ..+.....+.....++..+... +..........+++... ..+...+ .....||+++.|.++..+
T Consensus 188 ~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv 267 (315)
T KOG2382|consen 188 GRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFV 267 (315)
T ss_pred cHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCc
Confidence 11 1112223344444444444332 11112222333333321 1122223 556889999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.-..+...+ |+++++.++++||+.++|+| +.+.+.|.+|+.++
T Consensus 268 ~~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P----~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 268 PDEHYPRMEKIF--PNVEVHELDEAGHWVHLEKP----EEFIESISEFLEEP 313 (315)
T ss_pred ChhHHHHHHHhc--cchheeecccCCceeecCCH----HHHHHHHHHHhccc
Confidence 999888888888 88999999999999997777 55888888888754
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=171.17 Aligned_cols=210 Identities=15% Similarity=0.133 Sum_probs=135.8
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCC-----ChHHHHhhHHHHHHHHHhhCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLG-----DMEKVAASSLSFFKHVRHSEP 126 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~-----~~~~~~~d~~~~i~~l~~~~~ 126 (323)
++.|+||++||++++.. .|..+++.|+++||+|+++|+||||.+..... ... ......+|+.++++++.....
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45789999999998876 78889999999999999999999997642211 100 112335677778888776544
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEE-EEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccc
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGL-IFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~-il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++..+++++|||+||.+++.++.++|+ +++. +++++... . ...... +.+....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~~~~~~~~------~-----~~~~~~--~~~~~~~----------- 157 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW--VKCVASLMGSGYF------T-----SLARTL--FPPLIPE----------- 157 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC--eeEEEEeeCcHHH------H-----HHHHHh--ccccccc-----------
Confidence 556799999999999999999998887 4444 34332210 0 000000 0000000
Q ss_pred cChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcc-cccEEEEeeCCCcccCchhHHHHHHHhcCC----C
Q 020630 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSA----D 278 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~ 278 (323)
.+. ............. +....+.++ ++|+|+++|++|.++|++.++.+.+.+... +
T Consensus 158 -~~~----------------~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~ 220 (249)
T PRK10566 158 -TAA----------------QQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKN 220 (249)
T ss_pred -ccc----------------cHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcc
Confidence 000 0000000000000 012234555 689999999999999999999999888432 3
Q ss_pred CcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++..++++||.+. ....+.+.+||+++
T Consensus 221 ~~~~~~~~~~H~~~--------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 221 LTCLWEPGVRHRIT--------PEALDAGVAFFRQH 248 (249)
T ss_pred eEEEecCCCCCccC--------HHHHHHHHHHHHhh
Confidence 57788999999875 23678899999865
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=195.00 Aligned_cols=263 Identities=14% Similarity=0.106 Sum_probs=153.6
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCChHHH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGDMEKV 110 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~~~~~ 110 (323)
.++...+| +|+|..+++.+ +|+|||+||++++.. .|..+.+.|. .||+|+++|+||||.|+... ...++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~---~~~ivllHG~~~~~~-~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD---RPTVVLVHGYPDNHE-VWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC---CCeEEEEcCCCchHH-HHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 44556788 99999988644 789999999998876 8999999994 57999999999999998543 234589999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccCCC------CCC---chhHHHH
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIP------ENM---KPSKLHL 179 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~~~------~~~---~~~~~~~ 179 (323)
++|+..+++.+... .+++|+||||||.+++.++... +.. +..++.+++..... ... .......
T Consensus 80 a~dl~~~i~~l~~~-----~~~~lvGhS~Gg~~a~~~a~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 80 ADDFAAVIDAVSPD-----RPVHLLAHDWGSIQGWEAVTRPRAAGR-IASFTSVSGPSLDHVGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHhCCC-----CcEEEEecChHHHHHHHHHhCccchhh-hhhheeccCCchHHHHHHHhhcccccchhhhhH
Confidence 99999999998643 2599999999999998887762 333 44444433221100 000 0000000
Q ss_pred HHhhcccccccc-cccCCCccc-ccccccChhhHHHhhcCCcccCCC-------CCchhHHHHHHh---hHHHHhcCCcc
Q 020630 180 FMYGLLFGLADT-WAAMPDNKM-VGKAIKDPEKLKVIASNPRRYTGK-------PRVGTMREIARV---CQYIQDNFSKV 247 (323)
Q Consensus 180 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~~ 247 (323)
............ ......... ...... ................. .........+.. ..........+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLPELLWRLGLG-RAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYT 232 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCcHHHhccchh-hHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCc
Confidence 000000000000 000000000 000000 00000000000000000 000000000000 00111234558
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++|+++|+|++|.++|++..+.+.+.+ ++.++++++ +||+.++++| +.+.+.|.+|+.+.
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p----~~~~~~i~~fl~~~ 292 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHP----QVLAAAVAEFVDAV 292 (582)
T ss_pred cCceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhCh----hHHHHHHHHHHHhc
Confidence 999999999999999999888887776 567777776 6999997766 55888888888764
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-26 Score=158.25 Aligned_cols=237 Identities=18% Similarity=0.236 Sum_probs=178.0
Q ss_pred cccccCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHH-hcCCcEEEEeccccCcCCCC
Q 020630 22 YYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISY-ATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l-~~~g~~vi~~d~~G~G~s~~ 99 (323)
.++..++++++..+.+.|. +|..+....+ .++|+++++||..++.. ..-.+++.+ ..-+.+|+.+++||+|.|.+
T Consensus 46 tP~~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 46 TPKEFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred CccccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 3567889999999999999 9988877743 57999999999998876 444444443 34479999999999999998
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
.+ +-+.+.-|..++++++..+...+..++++.|-|.||.+|+.+|+++.++ +.++|+-+.+...+....+..
T Consensus 123 sp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r-i~~~ivENTF~SIp~~~i~~v--- 194 (300)
T KOG4391|consen 123 SP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR-ISAIIVENTFLSIPHMAIPLV--- 194 (300)
T ss_pred Cc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh-eeeeeeechhccchhhhhhee---
Confidence 76 4455667888999999988777788999999999999999999999998 999999998776543221100
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
..+ .. ..+ ..+. +...-.....+...+.|.|++.|.+|
T Consensus 195 ------~p~-------~~-k~i---------~~lc-------------------~kn~~~S~~ki~~~~~P~LFiSGlkD 232 (300)
T KOG4391|consen 195 ------FPF-------PM-KYI---------PLLC-------------------YKNKWLSYRKIGQCRMPFLFISGLKD 232 (300)
T ss_pred ------ccc-------hh-hHH---------HHHH-------------------HHhhhcchhhhccccCceEEeecCcc
Confidence 000 00 000 0000 00000012334456889999999999
Q ss_pred cccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+||+...+.+++.+++...++.++|++.|.-... .+-..+.|.+||.+...
T Consensus 233 elVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-----~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 233 ELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-----CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred ccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-----eccHHHHHHHHHHHhcc
Confidence 99999999999999988889999999999987632 24488999999998765
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=180.16 Aligned_cols=287 Identities=13% Similarity=0.141 Sum_probs=171.7
Q ss_pred ccccccCCccceeEEecCCC-cEEEEEecCCC----CCCceEEEEecCCCCCcchhh------HHHHHHHhcCCcEEEEe
Q 020630 21 EYYTSQGVRNGKEYFETPNG-KLFTQSFLPLD----QKVKATVYMTHGYGSDTGWMF------QKICISYATWGYAVFAA 89 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~----~~~~~~vv~~hG~~~~~~~~~------~~~~~~l~~~g~~vi~~ 89 (323)
++....+.+.+++.+++.|| .|...+..+.. ...+|+|+++||+++++. .| +.++..|+++||+|+++
T Consensus 35 ~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~ 113 (395)
T PLN02872 35 QLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVG 113 (395)
T ss_pred HHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCcccc
Confidence 34467899999999999999 88888764321 134689999999987765 44 34666788999999999
Q ss_pred ccccCcCCCCC-------C-CCCCChHHHH-hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC---CCee
Q 020630 90 DLLGHGRSDGI-------R-CYLGDMEKVA-ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP---NTWT 157 (323)
Q Consensus 90 d~~G~G~s~~~-------~-~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~ 157 (323)
|+||++.|.+. . ...+++++++ .|+.++++++.... ..+++++||||||.+++.++ .+|+ . |+
T Consensus 114 n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~-v~ 188 (395)
T PLN02872 114 NVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEM-VE 188 (395)
T ss_pred cccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHH-HH
Confidence 99998866321 1 1134788888 89999999986532 35899999999999998655 5565 4 88
Q ss_pred EEEEccCccCCCCCCchhHH-HH--HHhhcccccccccccCCCcccc----cccccCh----h-hHHHhhcCC-------
Q 020630 158 GLIFSAPLFVIPENMKPSKL-HL--FMYGLLFGLADTWAAMPDNKMV----GKAIKDP----E-KLKVIASNP------- 218 (323)
Q Consensus 158 ~~il~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~-~~~~~~~~~------- 218 (323)
.+++++|.........+... .. .....+. ........+..... ....... . ...+...+.
T Consensus 189 ~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~ 267 (395)
T PLN02872 189 AAALLCPISYLDHVTAPLVLRMVFMHLDQMVV-AMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRI 267 (395)
T ss_pred HHHHhcchhhhccCCCHHHHHHHHHhHHHHHH-HhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhh
Confidence 88889888765332222110 00 0000000 00000000000000 0000000 0 000000000
Q ss_pred ----cccCCCCCchhHHHHHHh----------------h------HHHHhcCCcc--cccEEEEeeCCCcccCchhHHHH
Q 020630 219 ----RRYTGKPRVGTMREIARV----------------C------QYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 219 ----~~~~~~~~~~~~~~~~~~----------------~------~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
...........+..+... . ....-.++++ ++|+++++|++|.+++++.++.+
T Consensus 268 ~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l 347 (395)
T PLN02872 268 DYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHT 347 (395)
T ss_pred hHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHH
Confidence 000000000000000000 0 0011235666 58999999999999999999999
Q ss_pred HHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 271 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.++. ..+++.+++++|..++- .++.++.+.+.|.+|+++..+
T Consensus 348 ~~~Lp~-~~~l~~l~~~gH~dfi~-~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 348 LAELPS-KPELLYLENYGHIDFLL-STSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred HHHCCC-ccEEEEcCCCCCHHHHh-CcchHHHHHHHHHHHHHHhhh
Confidence 999842 25888999999973321 134567899999999987654
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=179.45 Aligned_cols=273 Identities=12% Similarity=0.090 Sum_probs=164.2
Q ss_pred ceeEEecCCCcEEEEEecCCC-CCCceEEEEecCCCCCcchh-----hHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 31 GKEYFETPNGKLFTQSFLPLD-QKVKATVYMTHGYGSDTGWM-----FQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~-----~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
+...+...++.+..+.|.|.. ...+++||++||+..+. +. +..+++.|.++||+|+++|++|+|.+...
T Consensus 37 ~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~---- 111 (350)
T TIGR01836 37 TPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY---- 111 (350)
T ss_pred CCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----
Confidence 344445555555555566643 23456799999986433 23 36799999999999999999999987532
Q ss_pred CChHHHHh-hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH-----
Q 020630 105 GDMEKVAA-SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH----- 178 (323)
Q Consensus 105 ~~~~~~~~-d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~----- 178 (323)
.++++++. ++.++++++....+ ..+++++||||||.+++.++..+|++ |+++|+++++.............
T Consensus 112 ~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~-v~~lv~~~~p~~~~~~~~~~~~~~~~~~ 188 (350)
T TIGR01836 112 LTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDK-IKNLVTMVTPVDFETPGNMLSNWARHVD 188 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchh-eeeEEEeccccccCCCCchhhhhccccC
Confidence 26777764 48888888877654 56899999999999999999999998 99999999887754322111000
Q ss_pred -HHHhhcccccccc-----cc-cCCCccccc------ccccChh-hHHHhhcCCcccCC-CCCchhHHHHHHh----hHH
Q 020630 179 -LFMYGLLFGLADT-----WA-AMPDNKMVG------KAIKDPE-KLKVIASNPRRYTG-KPRVGTMREIARV----CQY 239 (323)
Q Consensus 179 -~~~~~~~~~~~~~-----~~-~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~ 239 (323)
.........+... +. ..+...... ....++. .............. ........++... ...
T Consensus 189 ~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l 268 (350)
T TIGR01836 189 IDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGL 268 (350)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcc
Confidence 0000000000000 00 000000000 0001111 01110000000000 0011111111111 000
Q ss_pred H---------HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 240 I---------QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 240 ~---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
. ...+.++++|+++++|++|.++|++.++.+.+.+++.+.++++++ +||...+.++ ...+++.+.|.+|
T Consensus 269 ~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~-~~~~~v~~~i~~w 346 (350)
T TIGR01836 269 INGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSG-KAQKEVPPAIGKW 346 (350)
T ss_pred cCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECc-hhHhhhhHHHHHH
Confidence 0 113567899999999999999999999999998865566777787 6899987665 3568899999999
Q ss_pred HHH
Q 020630 311 IDE 313 (323)
Q Consensus 311 l~~ 313 (323)
|.+
T Consensus 347 l~~ 349 (350)
T TIGR01836 347 LQA 349 (350)
T ss_pred HHh
Confidence 975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-25 Score=177.93 Aligned_cols=262 Identities=12% Similarity=0.050 Sum_probs=159.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc------------hhhHHHHH---HHhcCCcEEEEeccccCcCCCCC-----
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG------------WMFQKICI---SYATWGYAVFAADLLGHGRSDGI----- 100 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~------------~~~~~~~~---~l~~~g~~vi~~d~~G~G~s~~~----- 100 (323)
+|.|..||..+....++||++|++++++. -.|..++- .|....|.||++|..|-|.|..+
T Consensus 42 ~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~t 121 (389)
T PRK06765 42 QMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITT 121 (389)
T ss_pred eEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCC
Confidence 78999999866455689999999988541 02444332 34444599999999987653211
Q ss_pred ---------------CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE-EEEechhHHHHHHHHhhcCCCCeeEEEEccC
Q 020630 101 ---------------RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 101 ---------------~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~ 164 (323)
....++++++++++.++++.++.+ ++. ++||||||++++.+|.++|++ |+++|++++
T Consensus 122 gp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~------~~~~vvG~SmGG~ial~~a~~~P~~-v~~lv~ia~ 194 (389)
T PRK06765 122 GPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA------RLHAVMGPSMGGMQAQEWAVHYPHM-VERMIGVIG 194 (389)
T ss_pred CCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHh-hheEEEEec
Confidence 112358999999999999998765 675 999999999999999999999 999999987
Q ss_pred ccCCCCCC-chh-HHHHHHhhccccccc-ccc--cCCCc------ccccccccC-h------------------------
Q 020630 165 LFVIPENM-KPS-KLHLFMYGLLFGLAD-TWA--AMPDN------KMVGKAIKD-P------------------------ 208 (323)
Q Consensus 165 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~-~~~--~~~~~------~~~~~~~~~-~------------------------ 208 (323)
........ ... .........-..+.. .+. ..+.. ......... .
T Consensus 195 ~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~ 274 (389)
T PRK06765 195 NPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLT 274 (389)
T ss_pred CCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchh
Confidence 65543221 000 000000000000000 000 00000 000000000 0
Q ss_pred hhHHHhhcCCcccCCCCCchhHHHHHHhhH---------HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcC--C
Q 020630 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS--A 277 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~ 277 (323)
.....+......+........+..+.+..+ ++.+.+.++++|+|+|+|++|.++|++.++.+.+.++. +
T Consensus 275 ~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~ 354 (389)
T PRK06765 275 SFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK 354 (389)
T ss_pred hHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC
Confidence 000110000000111111111222222211 23456778999999999999999999999999888842 3
Q ss_pred CCcEEEecC-CCccccccCCchhHHHHHHHHHHHHHH
Q 020630 278 DKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 278 ~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++++++++ +||..++++| +++.+.|.+||++
T Consensus 355 ~a~l~~I~s~~GH~~~le~p----~~~~~~I~~FL~~ 387 (389)
T PRK06765 355 YAEVYEIESINGHMAGVFDI----HLFEKKIYEFLNR 387 (389)
T ss_pred CeEEEEECCCCCcchhhcCH----HHHHHHHHHHHcc
Confidence 689999985 8999997665 6688999999875
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=158.19 Aligned_cols=218 Identities=20% Similarity=0.258 Sum_probs=162.0
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+....++..| .+....+.++. ...+++++.||...+.. ....+...|.. -+++++++|++|+|.|.+.+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---- 108 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---- 108 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCccc----
Confidence 34556678888 77777777765 45699999999966655 33344445544 2699999999999999987643
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
....+|+.++.++++.+++ ..++++|+|+|+|...++.+|.+.| ++++|+.+|....-......
T Consensus 109 ~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~---~~alVL~SPf~S~~rv~~~~------------ 172 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP---LAAVVLHSPFTSGMRVAFPD------------ 172 (258)
T ss_pred ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC---cceEEEeccchhhhhhhccC------------
Confidence 3667899999999999985 5789999999999999999999988 78999999986532111100
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
. ...+.-. .+. ..+..+.++||+|++||++|.+++....
T Consensus 173 -~-------~~~~~~d-----------------------------~f~----~i~kI~~i~~PVLiiHgtdDevv~~sHg 211 (258)
T KOG1552|consen 173 -T-------KTTYCFD-----------------------------AFP----NIEKISKITCPVLIIHGTDDEVVDFSHG 211 (258)
T ss_pred -c-------ceEEeec-----------------------------ccc----ccCcceeccCCEEEEecccCceeccccc
Confidence 0 0000000 000 1356788899999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+.+..+.+ .+..++.|+||.... ...++...+..|+.....
T Consensus 212 ~~Lye~~k~~-~epl~v~g~gH~~~~-----~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 212 KALYERCKEK-VEPLWVKGAGHNDIE-----LYPEYIEHLRRFISSVLP 254 (258)
T ss_pred HHHHHhcccc-CCCcEEecCCCcccc-----cCHHHHHHHHHHHHHhcc
Confidence 9999998543 688999999999982 234578888888876543
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-24 Score=160.16 Aligned_cols=287 Identities=13% Similarity=0.111 Sum_probs=174.2
Q ss_pred cccCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCCC
Q 020630 24 TSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~ 101 (323)
....+.+....+.++|| .+......++....+|.||++||+.+++ +.+.+.+.+.+.++||.|+++++|||+.+....
T Consensus 43 r~~~~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~ 122 (345)
T COG0429 43 RKPKVAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS 122 (345)
T ss_pred cccccccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC
Confidence 35666777888999999 5555555544446678999999997764 325567888999999999999999999997644
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhH-HHHHHHHhhcCCCCeeEEEEccCccCCC-------CCCc
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIP-------ENMK 173 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~il~~~~~~~~-------~~~~ 173 (323)
...+ -....+|+..++++++...+ ..++..+|.|+|| +++..++..-.+..+.+.+.++.+.++. ....
T Consensus 123 p~~y-h~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s 199 (345)
T COG0429 123 PRLY-HSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFS 199 (345)
T ss_pred ccee-cccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchh
Confidence 3332 23345899999999988776 7899999999999 5555555543333366666665544421 0000
Q ss_pred hhHHHHHHhhcccccc-cccccCCCcccccc-cccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccE
Q 020630 174 PSKLHLFMYGLLFGLA-DTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
.......+...+.... ...... ....... ...-+....+...+.........+....++++... ....+.+|.+|+
T Consensus 200 ~~ly~r~l~~~L~~~~~~kl~~l-~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS-s~~~L~~Ir~Pt 277 (345)
T COG0429 200 LRLYSRYLLRNLKRNAARKLKEL-EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS-SLPLLPKIRKPT 277 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhc-CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcc-ccccccccccce
Confidence 0000011111111100 000000 0000000 00000011111222222222222333444444443 346789999999
Q ss_pred EEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHH-HHHHHHHHHHHHHHh
Q 020630 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENAN-LVLKDMREWIDERVE 316 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~-~~~~~i~~fl~~~~~ 316 (323)
|+|++.+|++++++........ .++++.+.+-+.+||..++........ ...+.+.+|++....
T Consensus 278 Lii~A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 278 LIINAKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EEEecCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999999998776655543 348899999999999999875433332 567888899887654
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.8e-25 Score=150.78 Aligned_cols=233 Identities=13% Similarity=0.035 Sum_probs=156.7
Q ss_pred CCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChH---HHHh
Q 020630 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLGDME---KVAA 112 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~---~~~~ 112 (323)
.+| +|.|..+|.. ...|+++.|.-++....|.+....|.+. -+.++++|.||+|.|..+.... ..+ .-++
T Consensus 28 vng~ql~y~~~G~G----~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~~~ff~~Da~ 102 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHG----PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-EVQFFMKDAE 102 (277)
T ss_pred ecCceeeeeecCCC----CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-hHHHHHHhHH
Confidence 467 9999999875 4578999998777544777766666554 3899999999999998765432 333 3445
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH-HHHHHhhcccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK-LHLFMYGLLFGLADT 191 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 191 (323)
+...+++.++.+ ++.++|+|-||..|+.+|+++++. |.++|+.++............ .++.......+
T Consensus 103 ~avdLM~aLk~~------~fsvlGWSdGgiTalivAak~~e~-v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r---- 171 (277)
T KOG2984|consen 103 YAVDLMEALKLE------PFSVLGWSDGGITALIVAAKGKEK-VNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSAR---- 171 (277)
T ss_pred HHHHHHHHhCCC------CeeEeeecCCCeEEEEeeccChhh-hhhheeecccceecchhHHHHhchHHHhhhhhh----
Confidence 555666666644 899999999999999999999999 999999887654432211100 00000000000
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH---------HHHhcCCcccccEEEEeeCCCccc
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
... .+ ...+..+... .....+..... -.+..+.+++||+|+++|++|+++
T Consensus 172 ~R~----P~-e~~Yg~e~f~----------------~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~ 230 (277)
T KOG2984|consen 172 GRQ----PY-EDHYGPETFR----------------TQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFC 230 (277)
T ss_pred hcc----hH-HHhcCHHHHH----------------HHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCC
Confidence 000 00 0000000000 00011111111 124567899999999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+...+-.+.... +.+++.++++++|.++ ..++++++..+.+||++
T Consensus 231 ~~~hv~fi~~~~--~~a~~~~~peGkHn~h----Lrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 231 GDPHVCFIPVLK--SLAKVEIHPEGKHNFH----LRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCCccchhhhc--ccceEEEccCCCccee----eechHHHHHHHHHHHhc
Confidence 999888888777 7789999999999999 56778899999999975
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=179.26 Aligned_cols=250 Identities=16% Similarity=0.116 Sum_probs=169.2
Q ss_pred ccCCccceeEEecCCC-cEEEEEecCCCCCC---ceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCC-
Q 020630 25 SQGVRNGKEYFETPNG-KLFTQSFLPLDQKV---KATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSD- 98 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~---~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~- 98 (323)
......+...+++.|| +|.++.+.|.+..+ -|+||++||.+... .+.+....+.|+.+||.|+.+++||.+.-.
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 4445567888999999 99999999976332 38999999997442 345677788899999999999999754321
Q ss_pred --CCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH
Q 020630 99 --GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 99 --~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~ 176 (323)
.......--....+|+.+.++++.....++..+++++|||+||++++.++.+.+. +++.+...+..........
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~--f~a~~~~~~~~~~~~~~~~-- 515 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPR--FKAAVAVAGGVDWLLYFGE-- 515 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCch--hheEEeccCcchhhhhccc--
Confidence 1100000122345778888887766665778899999999999999999999884 7777766654431110000
Q ss_pred HHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEee
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 256 (323)
....+... .......+. . -...+.... ......++++|+|+|||
T Consensus 516 -------~~~~~~~~---------~~~~~~~~~------------------~-~~~~~~~~s-p~~~~~~i~~P~LliHG 559 (620)
T COG1506 516 -------STEGLRFD---------PEENGGGPP------------------E-DREKYEDRS-PIFYADNIKTPLLLIHG 559 (620)
T ss_pred -------cchhhcCC---------HHHhCCCcc------------------c-ChHHHHhcC-hhhhhcccCCCEEEEee
Confidence 00000000 000000000 0 000000000 13446788999999999
Q ss_pred CCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 257 TADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++|..||.+++..+.+.+. +.+++++++|+.+|.+.. .+....+.+.+.+|++++++.
T Consensus 560 ~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 560 EEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred cCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999884 566899999999999983 456778899999999998753
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=170.69 Aligned_cols=268 Identities=12% Similarity=0.080 Sum_probs=155.0
Q ss_pred ccccccCCccceeEEecCCCcEEEEEecCCCC-CCceEEEEecCCCCCcchhhH-----HHHHHHhcCCcEEEEeccccC
Q 020630 21 EYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQ-----KICISYATWGYAVFAADLLGH 94 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~-----~~~~~l~~~g~~vi~~d~~G~ 94 (323)
.|.....+..+...+...++.+..+.|.|... ..+++||++||+... .+.++ .+++.|.++||+|+++|++|+
T Consensus 153 ~f~vg~~~a~Tpg~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k-~yilDL~p~~Slv~~L~~qGf~V~~iDwrgp 231 (532)
T TIGR01838 153 AFEVGRNLATTPGAVVFENELFQLIQYEPTTETVHKTPLLIVPPWINK-YYILDLRPQNSLVRWLVEQGHTVFVISWRNP 231 (532)
T ss_pred ceeeCCCCCCCCCeEEEECCcEEEEEeCCCCCcCCCCcEEEECccccc-ceeeecccchHHHHHHHHCCcEEEEEECCCC
Confidence 34344555555556666666566667777643 257899999999744 33553 799999999999999999999
Q ss_pred cCCCCCCCCCCChHHHH-hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHH----HHHhhc-CCCCeeEEEEccCccCC
Q 020630 95 GRSDGIRCYLGDMEKVA-ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATM----LMYFQS-EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 95 G~s~~~~~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~~v~~~il~~~~~~~ 168 (323)
|.+.... ++++++ +++.+.++.+....+ ..+++++||||||.++. .+++.+ +++ |++++++++..++
T Consensus 232 g~s~~~~----~~ddY~~~~i~~al~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~r-v~slvll~t~~Df 304 (532)
T TIGR01838 232 DASQADK----TFDDYIRDGVIAALEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKR-IKSATFFTTLLDF 304 (532)
T ss_pred CcccccC----ChhhhHHHHHHHHHHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCc-cceEEEEecCcCC
Confidence 9885432 344444 345666666554332 45899999999999852 245554 666 9999999988776
Q ss_pred CCCCchhH-----HHHHHhhccc--cccccc------ccCCCcccc-c----ccccCh--h--hHHHhhcCCcccCCCCC
Q 020630 169 PENMKPSK-----LHLFMYGLLF--GLADTW------AAMPDNKMV-G----KAIKDP--E--KLKVIASNPRRYTGKPR 226 (323)
Q Consensus 169 ~~~~~~~~-----~~~~~~~~~~--~~~~~~------~~~~~~~~~-~----~~~~~~--~--~~~~~~~~~~~~~~~~~ 226 (323)
........ ....+...+. +..+.. .......++ . ..+... . .......+...+.....
T Consensus 305 ~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~ 384 (532)
T TIGR01838 305 SDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMH 384 (532)
T ss_pred CCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHH
Confidence 64322111 0101111110 000000 000000000 0 000000 0 00000001111100000
Q ss_pred chhHHHHHHhhH---------HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCc
Q 020630 227 VGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD 297 (323)
Q Consensus 227 ~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 297 (323)
...+..++.... .....+.+|++|++++.|++|.++|++.+..+.+.+ ++.+..+++++||..++++|.
T Consensus 385 ~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 385 NFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred HHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCC
Confidence 011111111111 012356788999999999999999999999998888 567888999999999988775
Q ss_pred h
Q 020630 298 E 298 (323)
Q Consensus 298 ~ 298 (323)
.
T Consensus 463 ~ 463 (532)
T TIGR01838 463 S 463 (532)
T ss_pred C
Confidence 3
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=147.57 Aligned_cols=145 Identities=30% Similarity=0.490 Sum_probs=113.4
Q ss_pred EEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEE
Q 020630 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFG 136 (323)
Q Consensus 57 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G 136 (323)
+||++||++++.. .|..+++.|+++||.|+.+|+|++|.+... +++.++++.+..... +..+++++|
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 6899999999876 789999999999999999999999987321 134444444311111 256999999
Q ss_pred echhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhc
Q 020630 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS 216 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (323)
||+||.+++.++.++ .+ ++++|++++...
T Consensus 68 ~S~Gg~~a~~~~~~~-~~-v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PR-VKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TT-ESEEEEESESSG-------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cc-eeEEEEecCccc-------------------------------------------------
Confidence 999999999999988 44 999999997210
Q ss_pred CCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcc
Q 020630 217 NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
.+.+.+.+.|+++++|++|..++.+..+.+++.++ .+.++.++++++|+
T Consensus 97 ------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp ------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred ------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12234556799999999999999999999999986 46899999999995
|
... |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-23 Score=148.92 Aligned_cols=183 Identities=13% Similarity=0.046 Sum_probs=119.5
Q ss_pred eEEEEecCCCCCcchhhH--HHHHHHhc--CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 56 ATVYMTHGYGSDTGWMFQ--KICISYAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~--~~~~~l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
|+||++||++++.. .|. .+.+.+.+ .+|+|+++|+||++ ++.++++.++++.+..+ +
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~------~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD------P 62 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC------C
Confidence 58999999998876 554 34566654 26999999999985 35667777888776543 8
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++||||||.+++.+|.++|. .+|+++|..... ..+........ . ......
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~----~~vl~~~~~~~~---------~~~~~~~~~~~-~-~~~~~~------------- 114 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFML----PAVVVNPAVRPF---------ELLTDYLGENE-N-PYTGQQ------------- 114 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCC----CEEEECCCCCHH---------HHHHHhcCCcc-c-ccCCCc-------------
Confidence 9999999999999999999884 257788764410 01111110000 0 000000
Q ss_pred HHhhcCCcccCCCCCchhHHHHHHhhHHH-HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcc
Q 020630 212 KVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
......+....... ...+. ..+|+++++|++|.++|++.+..+++. ++.++++|++|.
T Consensus 115 ---------------~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~ 173 (190)
T PRK11071 115 ---------------YVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHA 173 (190)
T ss_pred ---------------EEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcc
Confidence 00000111110000 01122 678899999999999999999998874 356788999999
Q ss_pred ccccCCchhHHHHHHHHHHHHH
Q 020630 291 LIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+. . .+++.+.+.+|+.
T Consensus 174 f~----~--~~~~~~~i~~fl~ 189 (190)
T PRK11071 174 FV----G--FERYFNQIVDFLG 189 (190)
T ss_pred hh----h--HHHhHHHHHHHhc
Confidence 96 2 2678888988874
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-22 Score=155.02 Aligned_cols=283 Identities=15% Similarity=0.127 Sum_probs=173.9
Q ss_pred cccCCccceeEEecCCC-cEEEEEecCCCC------CCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCc
Q 020630 24 TSQGVRNGKEYFETPNG-KLFTQSFLPLDQ------KVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHG 95 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~------~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G 95 (323)
....+.+++..++++|| .+.+....+... ...|.||++||+.+++. ..-..++..+.++||+|++++.||+|
T Consensus 87 ~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 87 SKPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLG 166 (409)
T ss_pred CCCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCC
Confidence 45677889999999999 888887755442 35699999999977653 24566788888899999999999999
Q ss_pred CCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCC--eeEEEEccCccCC--CCC
Q 020630 96 RSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNT--WTGLIFSAPLFVI--PEN 171 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~--v~~~il~~~~~~~--~~~ 171 (323)
.+.-.....++ ..+.+|+.+++++++.+++ ..++..+|.||||.+.+.+..+..+.. +.++++++|+... ...
T Consensus 167 g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~ 243 (409)
T KOG1838|consen 167 GSKLTTPRLFT-AGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRS 243 (409)
T ss_pred CCccCCCceee-cCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhH
Confidence 99855444332 3456899999999999998 779999999999999999998743321 5666666666532 110
Q ss_pred Cc---hhHHHH-HHhhcccccc-cccc-cCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC
Q 020630 172 MK---PSKLHL-FMYGLLFGLA-DTWA-AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 172 ~~---~~~~~~-~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
.. ..+... .+..-+.+.. .... ............+....+++.+.......+.. ...++++... ....+.
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~---~~deYY~~aS-s~~~v~ 319 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFK---SVDEYYKKAS-SSNYVD 319 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCC---cHHHHHhhcc-hhhhcc
Confidence 00 000000 0000011010 0000 00000111111122223333322222222222 2333333322 346788
Q ss_pred cccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHH-HHHHHHHH
Q 020630 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKD-MREWIDER 314 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~-i~~fl~~~ 314 (323)
+|++|+|+|++.+|+++|.+..- ..+...++++-+++-..+||..+++.-........+. +.+|+...
T Consensus 320 ~I~VP~L~ina~DDPv~p~~~ip-~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 320 KIKVPLLCINAADDPVVPEEAIP-IDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred cccccEEEEecCCCCCCCcccCC-HHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 99999999999999999976422 2233345788888888899999987621122333444 67776654
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=152.42 Aligned_cols=118 Identities=20% Similarity=0.188 Sum_probs=95.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~ 119 (323)
.+..+..++.. ..+|.++++||+|.+.- .|..++..|..+ ..+|+++|+||||++........+.+.+++|+.+++.
T Consensus 61 t~n~Y~t~~~~-t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~ 138 (343)
T KOG2564|consen 61 TFNVYLTLPSA-TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIK 138 (343)
T ss_pred eEEEEEecCCC-CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHH
Confidence 45555556643 66899999999998776 899999888765 5688999999999998776666699999999999999
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPL 165 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~ 165 (323)
++-.+. ..+++||||||||.+|...|... |. +.++++++-.
T Consensus 139 ~~fge~---~~~iilVGHSmGGaIav~~a~~k~lps--l~Gl~viDVV 181 (343)
T KOG2564|consen 139 ELFGEL---PPQIILVGHSMGGAIAVHTAASKTLPS--LAGLVVIDVV 181 (343)
T ss_pred HHhccC---CCceEEEeccccchhhhhhhhhhhchh--hhceEEEEEe
Confidence 887443 45899999999999998887653 44 7888887743
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-23 Score=155.03 Aligned_cols=132 Identities=16% Similarity=0.233 Sum_probs=108.0
Q ss_pred eEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCc---chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHH
Q 020630 33 EYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDT---GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
.+++...|.+....+.|.+.+++++||++||++... ...|..+++.|+++||+|+++|+||||.|.+.... .+++.
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~ 81 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDV 81 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHH
Confidence 456677777777777776545678999999998642 22577788999999999999999999999765432 37888
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
+++|+..+++++.... ..+++++||||||.+++.+|.++|+. ++++|+++|.....
T Consensus 82 ~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~-v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAK-CNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccc-cceEEEeccccchH
Confidence 9999999998887652 45899999999999999999999988 99999999876543
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.2e-22 Score=149.60 Aligned_cols=181 Identities=12% Similarity=0.065 Sum_probs=124.7
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC----------CCC---ChHHHHhhHHHHHH
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC----------YLG---DMEKVAASSLSFFK 119 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~----------~~~---~~~~~~~d~~~~i~ 119 (323)
.++++||++||+|++.. .|..+++.|...++.+..++.+|...+..... ... ++....+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 56789999999999987 78899999987665556666666532211000 000 12333445556666
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNK 199 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (323)
++..+..++..+++++|||+||.+++.++..+|+. +.+++.+++.... ..
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~-~~~vv~~sg~~~~-----------------------~~------ 142 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGL-AGRVIAFSGRYAS-----------------------LP------ 142 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc-ceEEEEecccccc-----------------------cc------
Confidence 66666555567899999999999999999988886 7777766542210 00
Q ss_pred cccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CC
Q 020630 200 MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SA 277 (323)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 277 (323)
.....+.|+++++|++|.++|.+.++.+.+.+. +.
T Consensus 143 -------------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 143 -------------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred -------------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 001125799999999999999999999888874 23
Q ss_pred CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++++++++||.+. .+ ..+.+.+||.+.+
T Consensus 180 ~~~~~~~~~~gH~i~----~~----~~~~~~~~l~~~l 209 (232)
T PRK11460 180 DVTLDIVEDLGHAID----PR----LMQFALDRLRYTV 209 (232)
T ss_pred CeEEEEECCCCCCCC----HH----HHHHHHHHHHHHc
Confidence 568888999999997 34 4444555555444
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=150.54 Aligned_cols=204 Identities=16% Similarity=0.134 Sum_probs=136.8
Q ss_pred hhHHHHHHHhcCCcEEEEeccccCcCCCCC---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHH
Q 020630 71 MFQKICISYATWGYAVFAADLLGHGRSDGI---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLM 147 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~ 147 (323)
.|......|+++||.|+.+|+||.+..... ......-...++|+.++++++..+..++..++.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 345567788899999999999998754311 11111234567999999999988877778899999999999999999
Q ss_pred HhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCc
Q 020630 148 YFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227 (323)
Q Consensus 148 a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (323)
+.++|+. +++++..+|..+........... ........ ...
T Consensus 82 ~~~~~~~-f~a~v~~~g~~d~~~~~~~~~~~------------------------------~~~~~~~~-~~~------- 122 (213)
T PF00326_consen 82 ATQHPDR-FKAAVAGAGVSDLFSYYGTTDIY------------------------------TKAEYLEY-GDP------- 122 (213)
T ss_dssp HHHTCCG-SSEEEEESE-SSTTCSBHHTCCH------------------------------HHGHHHHH-SST-------
T ss_pred hccccee-eeeeeccceecchhccccccccc------------------------------cccccccc-Ccc-------
Confidence 9999998 99999999887654332211000 00000000 000
Q ss_pred hhHHHHHHhhHHHHhcCCc--ccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHH
Q 020630 228 GTMREIARVCQYIQDNFSK--VTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLV 303 (323)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 303 (323)
......+.... ....+.+ +++|+|+++|++|..||++.+..+.+.+. +.++++++++++||.+.. .+.....
T Consensus 123 ~~~~~~~~~~s-~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~---~~~~~~~ 198 (213)
T PF00326_consen 123 WDNPEFYRELS-PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN---PENRRDW 198 (213)
T ss_dssp TTSHHHHHHHH-HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS---HHHHHHH
T ss_pred chhhhhhhhhc-cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC---chhHHHH
Confidence 00001111111 1233444 78999999999999999999999998883 345899999999996652 4455688
Q ss_pred HHHHHHHHHHHHhh
Q 020630 304 LKDMREWIDERVER 317 (323)
Q Consensus 304 ~~~i~~fl~~~~~~ 317 (323)
.+.+.+||+++++.
T Consensus 199 ~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 199 YERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999998764
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-22 Score=149.83 Aligned_cols=201 Identities=18% Similarity=0.168 Sum_probs=139.3
Q ss_pred EEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcC-CCCCCCCC-C--------ChHHHHh
Q 020630 43 FTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGR-SDGIRCYL-G--------DMEKVAA 112 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~-s~~~~~~~-~--------~~~~~~~ 112 (323)
..++..|.+.++.|.||++|++.+-.. ..+.+++.|+++||.|+++|+-+-.. ........ . ..+...+
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 456777876557899999999987665 67789999999999999999865443 11111000 0 1245668
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
++.+.++++..+..++..++.++|+|+||.+++.++... .. ++++|...|..... .
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~-~~a~v~~yg~~~~~----~------------------ 136 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PR-VDAAVSFYGGSPPP----P------------------ 136 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TT-SSEEEEES-SSSGG----G------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cc-cceEEEEcCCCCCC----c------------------
Confidence 888899999888645567999999999999999999887 44 89998877611000 0
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
......++++|+++++|++|+.++.+..+.+.+
T Consensus 137 -----------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 137 -----------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp -----------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred -----------------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 123356778999999999999999998888887
Q ss_pred Hh--cCCCCcEEEecCCCccccccCCc----hhHHHHHHHHHHHHHHHH
Q 020630 273 KA--SSADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDERV 315 (323)
Q Consensus 273 ~~--~~~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~~ 315 (323)
.+ .+...++++|+|++|.+...... +..++.++.+.+||++++
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 77 34568999999999999865443 467778889999998764
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-22 Score=138.47 Aligned_cols=243 Identities=17% Similarity=0.215 Sum_probs=154.1
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
....++...+ ++....... ++...||++||+-++.. .....++..|.+.|+-++.+|++|.|+|.+.-.+. ...
T Consensus 11 ~~ivi~n~~ne~lvg~lh~t---gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G-n~~ 86 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGLLHET---GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG-NYN 86 (269)
T ss_pred eEEEeccCCCchhhcceecc---CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC-ccc
Confidence 4455566666 665544433 34789999999998753 24567888999999999999999999998764432 556
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
..++|+..+++++.... ..--+++|||-||.+++.+|.++++ ++-+|.+++-++........-....+......
T Consensus 87 ~eadDL~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRydl~~~I~eRlg~~~l~~ike~- 160 (269)
T KOG4667|consen 87 TEADDLHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHD--IRNVINCSGRYDLKNGINERLGEDYLERIKEQ- 160 (269)
T ss_pred chHHHHHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcC--chheEEcccccchhcchhhhhcccHHHHHHhC-
Confidence 66799999999998642 1112489999999999999999998 88888888766543322100000000000000
Q ss_pred ccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHH-HHhhHHHHhcCCcc--cccEEEEeeCCCcccCch
Q 020630 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI-ARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~ 265 (323)
..+...+... ..........+ .+...+..+...+| +||+|-+||..|.+||.+
T Consensus 161 -Gfid~~~rkG-----------------------~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve 216 (269)
T KOG4667|consen 161 -GFIDVGPRKG-----------------------KYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVE 216 (269)
T ss_pred -CceecCcccC-----------------------CcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeech
Confidence 0000000000 00000000001 11111122233334 899999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.++++.+ ++.++.+++|+.|.....+ .+.......|...+
T Consensus 217 ~AkefAk~i--~nH~L~iIEgADHnyt~~q-----~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 217 DAKEFAKII--PNHKLEIIEGADHNYTGHQ-----SQLVSLGLEFIKTR 258 (269)
T ss_pred hHHHHHHhc--cCCceEEecCCCcCccchh-----hhHhhhcceeEEee
Confidence 999999999 6789999999999998322 33445555554433
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-22 Score=177.88 Aligned_cols=273 Identities=12% Similarity=0.121 Sum_probs=160.8
Q ss_pred cceeEEecCCCcEEEEEecCCCC-----CCceEEEEecCCCCCcchhhHH-----HHHHHhcCCcEEEEeccccCcCCCC
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQ-----KVKATVYMTHGYGSDTGWMFQK-----ICISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~-----~~~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
.+...+...++.+..+.|.|... ..+++|||+||++.+.. .|+. +.+.|.++||+|+++|+ |.++.
T Consensus 37 ~tp~~vv~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~ 112 (994)
T PRK07868 37 PSPFQIVESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDK 112 (994)
T ss_pred CCCCcEEEEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCCh
Confidence 34444555566555666666541 35689999999987765 7765 37889899999999994 66554
Q ss_pred CCC-CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC-CCCeeEEEEccCccCCCCCCchhHH
Q 020630 100 IRC-YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE-PNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 100 ~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~v~~~il~~~~~~~~~~~~~~~~ 177 (323)
+.. ...++.+.+..+.+.++.+.... ..+++++||||||.+++.+++.++ ++ |+++|++++..++.........
T Consensus 113 ~~~~~~~~l~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~-v~~lvl~~~~~d~~~~~~~~~~ 188 (994)
T PRK07868 113 VEGGMERNLADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKD-IASIVTFGSPVDTLAALPMGIP 188 (994)
T ss_pred hHcCccCCHHHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCc-cceEEEEecccccCCCCcccch
Confidence 322 12366666666666666554332 348999999999999999987654 46 9999998887654322111000
Q ss_pred H---HHHhhccc-----c-ccccccc-------CCCc------ccccccccCh-------hhHHHhhcCCcccCCCCCch
Q 020630 178 H---LFMYGLLF-----G-LADTWAA-------MPDN------KMVGKAIKDP-------EKLKVIASNPRRYTGKPRVG 228 (323)
Q Consensus 178 ~---~~~~~~~~-----~-~~~~~~~-------~~~~------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 228 (323)
. .....++. . ..+.+.. .+.. .+.. .+.+. ....+...... .. ....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~-~l~~~~~~~~~e~~~~~~~~~~w--~~-~~g~ 264 (994)
T PRK07868 189 AGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLR-QLHDREALLPREQQRRFLESEGW--IA-WSGP 264 (994)
T ss_pred hhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHH-hcCchhhhccchhhHhHHHHhhc--cc-cchH
Confidence 0 00000000 0 0000000 0000 0000 00000 00011100000 00 0000
Q ss_pred hHHHHHHhhH----HHH---------hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcE-EEecCCCcccccc
Q 020630 229 TMREIARVCQ----YIQ---------DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI-KIYDGMYHSLIQG 294 (323)
Q Consensus 229 ~~~~~~~~~~----~~~---------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~ 294 (323)
...++.+... ... ..++++++|+|+|+|++|.++|++.++.+.+.+ ++.++ .+++++||+.++.
T Consensus 265 ~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~ 342 (994)
T PRK07868 265 AISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVV 342 (994)
T ss_pred HHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeee
Confidence 1111222111 000 147889999999999999999999999999888 67776 6779999998865
Q ss_pred CCchhHHHHHHHHHHHHHHHHhh
Q 020630 295 EPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.. ...+.++..|.+||.++...
T Consensus 343 g~-~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 343 GS-RAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred ch-hhhhhhChHHHHHHHHhccC
Confidence 44 45788999999999998743
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-20 Score=141.03 Aligned_cols=213 Identities=17% Similarity=0.155 Sum_probs=165.3
Q ss_pred ceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-cCCCCCCC------C
Q 020630 31 GKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-GRSDGIRC------Y 103 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~------~ 103 (323)
+...+..+++.+..+...|.+..+.|.||++|++.+-.. ..+.+++.|++.||.|+++|+-+. |.+..... .
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred cceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 345666777789999999987555699999999988777 889999999999999999998874 33321110 0
Q ss_pred ----CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 104 ----LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 104 ----~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
..+..+...|+.+.++++..+..++..+|.++|+||||.+++.++...|+ +++.+..-+......
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~--v~a~v~fyg~~~~~~--------- 150 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE--VKAAVAFYGGLIADD--------- 150 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC--ccEEEEecCCCCCCc---------
Confidence 11236778999999999998765567789999999999999999999884 899888766543110
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
.....++++|+|+..|+.|
T Consensus 151 -------------------------------------------------------------~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 151 -------------------------------------------------------------TADAPKIKVPVLLHLAGED 169 (236)
T ss_pred -------------------------------------------------------------ccccccccCcEEEEecccC
Confidence 1113577999999999999
Q ss_pred cccCchhHHHHHHHhcCC--CCcEEEecCCCccccccC-------CchhHHHHHHHHHHHHHHHHh
Q 020630 260 GVTCPTSSKLLYEKASSA--DKSIKIYDGMYHSLIQGE-------PDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-------~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+|......+.+.+... .+++.+++++.|.++-.. .....+..++.+.+||++.+.
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 999999888888877433 678999999989998432 335677788999999988753
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-23 Score=160.67 Aligned_cols=202 Identities=20% Similarity=0.188 Sum_probs=123.3
Q ss_pred cEEEEeccccCcCCCC---CCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEE
Q 020630 84 YAVFAADLLGHGRSDG---IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 84 ~~vi~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~i 160 (323)
|+|+++|+||+|.|+. .....++.+++++++..+++.++.+ +++++||||||.+++.+|..+|++ |+++|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~vG~S~Gg~~~~~~a~~~p~~-v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK------KINLVGHSMGGMLALEYAAQYPER-VKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS------SEEEEEETHHHHHHHHHHHHSGGG-EEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC------CeEEEEECCChHHHHHHHHHCchh-hcCcE
Confidence 7899999999999995 4445568999999999999998865 799999999999999999999998 99999
Q ss_pred EccCcc----CCCCCCchh-HHHHHHhhcccc-cccccccCCCcc-----ccccc-ccChhhHHHhhcCCcccCCCCCch
Q 020630 161 FSAPLF----VIPENMKPS-KLHLFMYGLLFG-LADTWAAMPDNK-----MVGKA-IKDPEKLKVIASNPRRYTGKPRVG 228 (323)
Q Consensus 161 l~~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 228 (323)
+++++. ......... ............ ............ ..... ......... . ..........
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~ 149 (230)
T PF00561_consen 74 LISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQ-S---QQYARFAETD 149 (230)
T ss_dssp EESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-H---HHHHHTCHHH
T ss_pred EEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccc-h---hhhhHHHHHH
Confidence 999862 100000000 000000000000 000000000000 00000 000000000 0 0000000000
Q ss_pred hHH------HHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCch
Q 020630 229 TMR------EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 229 ~~~------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
... ............+..+++|+++++|++|.++|++....+.+.+ ++.++++++++||..+++++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 150 AFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHH
T ss_pred HHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHh
Confidence 000 1111122234567789999999999999999999999988888 7899999999999999766644
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-20 Score=143.81 Aligned_cols=219 Identities=15% Similarity=0.129 Sum_probs=132.7
Q ss_pred cEEEEEecCCC--CCCceEEEEecCCCCCcchhhH--HHHHHH-hcCCcEEEEecc--ccCcCCCCCC------------
Q 020630 41 KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ--KICISY-ATWGYAVFAADL--LGHGRSDGIR------------ 101 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~--~~~~~l-~~~g~~vi~~d~--~G~G~s~~~~------------ 101 (323)
.+.|.+|.|++ .++.|+|+++||++++.. .|. .....+ .+.|+.|+++|. +|+|.+....
T Consensus 26 ~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~ 104 (275)
T TIGR02821 26 PMTFGVFLPPQAAAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYV 104 (275)
T ss_pred ceEEEEEcCCCccCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccc
Confidence 88899999864 345799999999998765 443 223344 456999999998 5555332100
Q ss_pred -------CCCCChH-HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc
Q 020630 102 -------CYLGDME-KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 102 -------~~~~~~~-~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~ 173 (323)
...+... .+++++..+++.. .+++..+++++||||||.+|+.++.++|+. +++++++++........
T Consensus 105 d~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~-~~~~~~~~~~~~~~~~~- 179 (275)
T TIGR02821 105 DATEEPWSQHYRMYSYIVQELPALVAAQ---FPLDGERQGITGHSMGGHGALVIALKNPDR-FKSVSAFAPIVAPSRCP- 179 (275)
T ss_pred cCCcCcccccchHHHHHHHHHHHHHHhh---CCCCCCceEEEEEChhHHHHHHHHHhCccc-ceEEEEECCccCcccCc-
Confidence 0001122 2245555555442 223356899999999999999999999999 99999999876532110
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEE
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
+.... ....+..+...... .+.. ...... ....|+++
T Consensus 180 --~~~~~-----------------------------~~~~l~~~~~~~~~-------~~~~----~~~~~~-~~~~plli 216 (275)
T TIGR02821 180 --WGQKA-----------------------------FSAYLGADEAAWRS-------YDAS----LLVADG-GRHSTILI 216 (275)
T ss_pred --chHHH-----------------------------HHHHhcccccchhh-------cchH----HHHhhc-ccCCCeeE
Confidence 00000 00000000000000 0000 011111 23679999
Q ss_pred EeeCCCcccCc-hhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 254 VHGTADGVTCP-TSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 254 i~g~~D~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+|+.|..++. .....+.+.+. +..+++.+++|++|.+.. .........+|..++
T Consensus 217 ~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 217 DQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred eecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhh
Confidence 99999999998 45556666653 345788999999999983 344666666676654
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=153.37 Aligned_cols=246 Identities=15% Similarity=0.146 Sum_probs=145.1
Q ss_pred cCCccceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 26 QGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
.+.+.++..++..+++|..+...|.++++.|+||++.|+.+.....+..+.+.|+.+|+.++++|.||.|.|...+.. .
T Consensus 161 ~~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~ 239 (411)
T PF06500_consen 161 SDYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-Q 239 (411)
T ss_dssp SSSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S
T ss_pred CCCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-c
Confidence 455567778887767888888888877778999999998877664566667788899999999999999999654322 2
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+.+ ..++++++.....+|..+|.++|.|+||++|.++|..++++ ++++|..++....-- .............
T Consensus 240 D~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-lkavV~~Ga~vh~~f--t~~~~~~~~P~my 313 (411)
T PF06500_consen 240 DSSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-LKAVVALGAPVHHFF--TDPEWQQRVPDMY 313 (411)
T ss_dssp -CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--SEEEEES---SCGG--H-HHHHTTS-HHH
T ss_pred CHHHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc-eeeEeeeCchHhhhh--ccHHHHhcCCHHH
Confidence 33333 34667777776667788999999999999999999988888 999999998753110 0000000000000
Q ss_pred c-ccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcC--CcccccEEEEeeCCCccc
Q 020630 186 F-GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF--SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 186 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~ 262 (323)
. .+..... ................... ....+ .+..+|+|.+.|++|.++
T Consensus 314 ~d~LA~rlG--------~~~~~~~~l~~el~~~SLk-------------------~qGlL~~rr~~~plL~i~~~~D~v~ 366 (411)
T PF06500_consen 314 LDVLASRLG--------MAAVSDESLRGELNKFSLK-------------------TQGLLSGRRCPTPLLAINGEDDPVS 366 (411)
T ss_dssp HHHHHHHCT---------SCE-HHHHHHHGGGGSTT-------------------TTTTTTSS-BSS-EEEEEETT-SSS
T ss_pred HHHHHHHhC--------CccCCHHHHHHHHHhcCcc-------------------hhccccCCCCCcceEEeecCCCCCC
Confidence 0 0000000 0000000000000000000 01233 667899999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCC-ccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMY-HSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+..+.++..- .+.+...++... |..+ +.....+.+||++.+
T Consensus 367 P~eD~~lia~~s--~~gk~~~~~~~~~~~gy--------~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 367 PIEDSRLIAESS--TDGKALRIPSKPLHMGY--------PQALDEIYKWLEDKL 410 (411)
T ss_dssp -HHHHHHHHHTB--TT-EEEEE-SSSHHHHH--------HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcC--CCCceeecCCCccccch--------HHHHHHHHHHHHHhc
Confidence 999988877765 445677777544 5554 567888999998764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.7e-21 Score=148.17 Aligned_cols=247 Identities=18% Similarity=0.197 Sum_probs=150.1
Q ss_pred cCCccceeEEecCCC-cEEEEEecCC-CCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCC---
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI--- 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~--- 100 (323)
..+...+..+.+.+| .|+.+.+.|. ..++.|+||.+||.++... .+.... .++.+||.|+.+|.||.|.....
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~ 129 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRG 129 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SS
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-Cccccc-ccccCCeEEEEecCCCCCCCCCCccc
Confidence 344455778888899 9999999998 4467799999999998865 444443 36778999999999999932210
Q ss_pred ------CC----------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccC
Q 020630 101 ------RC----------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 101 ------~~----------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~ 164 (323)
.. ..+-+..+..|....++.+.....+|..++.+.|.|+||.+++.+|+..+. |++++...|
T Consensus 130 ~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r--v~~~~~~vP 207 (320)
T PF05448_consen 130 SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR--VKAAAADVP 207 (320)
T ss_dssp BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST---SEEEEESE
T ss_pred cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc--ccEEEecCC
Confidence 00 011234566889999999998887888999999999999999999999765 999999887
Q ss_pred ccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhh-cCCcccCCCCCchhHHHHHHhhHHHHhc
Q 020630 165 LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
+..-... ....... . ..-.....++. .+... .......+.+... +....
T Consensus 208 ~l~d~~~---------~~~~~~~------~----------~~y~~~~~~~~~~d~~~----~~~~~v~~~L~Y~-D~~nf 257 (320)
T PF05448_consen 208 FLCDFRR---------ALELRAD------E----------GPYPEIRRYFRWRDPHH----EREPEVFETLSYF-DAVNF 257 (320)
T ss_dssp SSSSHHH---------HHHHT--------S----------TTTHHHHHHHHHHSCTH----CHHHHHHHHHHTT--HHHH
T ss_pred Cccchhh---------hhhcCCc------c----------ccHHHHHHHHhccCCCc----ccHHHHHHHHhhh-hHHHH
Confidence 6541100 0000000 0 00000001110 00000 0000011111111 13455
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++|+||+++-.|-.|.++|+......++.++++ +++.+++..||... . +...+...+||.++
T Consensus 258 A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~-K~l~vyp~~~He~~----~---~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 258 ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGP-KELVVYPEYGHEYG----P---EFQEDKQLNFLKEH 320 (320)
T ss_dssp GGG--SEEEEEEETT-SSS-HHHHHHHHCC--SS-EEEEEETT--SSTT----H---HHHHHHHHHHHHH-
T ss_pred HHHcCCCEEEEEecCCCCCCchhHHHHHhccCCC-eeEEeccCcCCCch----h---hHHHHHHHHHHhcC
Confidence 6889999999999999999999999999999754 89999999999887 2 22267788888764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=127.59 Aligned_cols=197 Identities=16% Similarity=0.173 Sum_probs=144.5
Q ss_pred cceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC---CCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
..+..+..+-|++-... .|.+.+..|..|++|.-+ ++. .-....++..|.++||.++.+|+||.|.|.+.-+.
T Consensus 4 ~~~v~i~Gp~G~le~~~-~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-- 80 (210)
T COG2945 4 MPTVIINGPAGRLEGRY-EPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-- 80 (210)
T ss_pred CCcEEecCCcccceecc-CCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--
Confidence 34566667777554433 333346688999999753 221 12556788899999999999999999999876543
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCE-EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPA-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
-. .-.+|..++++|++.+.+ ..+. .+.|+|+|+++++.+|.+.|+ +...+.+.|.....
T Consensus 81 Gi-GE~~Da~aaldW~~~~hp--~s~~~~l~GfSFGa~Ia~~la~r~~e--~~~~is~~p~~~~~--------------- 140 (210)
T COG2945 81 GI-GELEDAAAALDWLQARHP--DSASCWLAGFSFGAYIAMQLAMRRPE--ILVFISILPPINAY--------------- 140 (210)
T ss_pred Cc-chHHHHHHHHHHHHhhCC--CchhhhhcccchHHHHHHHHHHhccc--ccceeeccCCCCch---------------
Confidence 12 235789999999999876 3344 689999999999999999888 56666666554310
Q ss_pred ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
-...+....+|.++|+|+.|.+++.
T Consensus 141 -------------------------------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 -------------------------------------------------------DFSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred -------------------------------------------------------hhhhccCCCCCceeEecChhhhhcH
Confidence 0122344578999999999999998
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
....++.+.. ..+++.+++++|+++ . ....+.+.+.+|+.
T Consensus 166 ~~~l~~~~~~---~~~~i~i~~a~HFF~----g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 166 VAVLKWQESI---KITVITIPGADHFFH----G-KLIELRDTIADFLE 205 (210)
T ss_pred HHHHHhhcCC---CCceEEecCCCceec----c-cHHHHHHHHHHHhh
Confidence 8888777663 478999999999999 2 34567888888884
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-20 Score=142.99 Aligned_cols=207 Identities=13% Similarity=0.153 Sum_probs=137.9
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
.+.+.++.|...+..|+|||+||++.+.. .|..+++.|+++||.|+++|++|++.+.. ...++ +..+++++
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i~----d~~~~~~~ 108 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEIK----DAAAVINW 108 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhHH----HHHHHHHH
Confidence 67788888876567799999999998877 78899999999999999999998653321 11222 22333333
Q ss_pred HHhh--------CCCCCCCEEEEEechhHHHHHHHHhhcCCC----CeeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 121 VRHS--------EPYRDLPAFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 121 l~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
+... ...+..+++++||||||.+++.+|..+++. +++++|+++|..........
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~-------------- 174 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT-------------- 174 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC--------------
Confidence 3221 112346899999999999999999987742 28999999887543211000
Q ss_pred ccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCc-----c--
Q 020630 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG-----V-- 261 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~-- 261 (323)
....+. ......++.+|+|++.+..|. .
T Consensus 175 --------~p~il~-------------------------------------~~~~s~~~~~P~liig~g~~~~~~~~~~p 209 (313)
T PLN00021 175 --------PPPVLT-------------------------------------YAPHSFNLDIPVLVIGTGLGGEPRNPLFP 209 (313)
T ss_pred --------CCcccc-------------------------------------cCcccccCCCCeEEEecCCCccccccccc
Confidence 000000 011223367999999998663 2
Q ss_pred --cCchh-HHHHHHHhcCCCCcEEEecCCCccccccCC-------------------chhHHHHHHHHHHHHHHHHh
Q 020630 262 --TCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEP-------------------DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 262 --~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-------------------~~~~~~~~~~i~~fl~~~~~ 316 (323)
.|... ...+++.++ +.+.+.+++++||+-++++. +...+.+...+..||...+.
T Consensus 210 ~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~ 285 (313)
T PLN00021 210 PCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLE 285 (313)
T ss_pred ccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 22433 367777775 35788899999999997665 13445566677888887663
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-19 Score=138.28 Aligned_cols=208 Identities=17% Similarity=0.173 Sum_probs=126.9
Q ss_pred CCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhH---HHHHHHhcCCcEEEEeccccCcC-----CCC------C
Q 020630 38 PNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ---KICISYATWGYAVFAADLLGHGR-----SDG------I 100 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~-----s~~------~ 100 (323)
.-| .+.|.+|.|+. +++.|+|+++||++++.. .|. .+.+.+...|+.|+.+|..++|. +.. .
T Consensus 27 ~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 27 TLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred ccCCceEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 445 89999998873 245799999999987754 342 34466677799999999887661 110 0
Q ss_pred C-------CC--CCC-hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC
Q 020630 101 R-------CY--LGD-MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 101 ~-------~~--~~~-~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~ 170 (323)
. .. ... .+.+.+++...++..... .+..+++++||||||..|+.++.++|+. +++++++++......
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~-~~~~~~~~~~~~~~~ 182 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDK-YKSVSAFAPIANPIN 182 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchh-EEEEEEECCccCccc
Confidence 0 00 001 122334555555443221 1255899999999999999999999998 999999998765321
Q ss_pred CCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc
Q 020630 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 250 (323)
.. +....+...+ .... ......++ ......+...++|
T Consensus 183 ~~---~~~~~~~~~~--------------------g~~~-~~~~~~d~-------------------~~~~~~~~~~~~p 219 (283)
T PLN02442 183 CP---WGQKAFTNYL--------------------GSDK-ADWEEYDA-------------------TELVSKFNDVSAT 219 (283)
T ss_pred Cc---hhhHHHHHHc--------------------CCCh-hhHHHcCh-------------------hhhhhhccccCCC
Confidence 11 1000000000 0000 00000000 0012234456899
Q ss_pred EEEEeeCCCcccCch-hHHHHHHHhc--CCCCcEEEecCCCcccc
Q 020630 251 FLTVHGTADGVTCPT-SSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
+++++|++|.+++.. .++.+.+.+. +.++++.++++.+|...
T Consensus 220 vli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 220 ILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred EEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 999999999998863 3455555442 34578999999999876
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-20 Score=137.81 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=87.7
Q ss_pred EEecCCC-CCCceEEEEecCCCCCcchhhH---HHHHHHhcCCcEEEEeccccCcCCCCCCCCC-----CChHHHHhhHH
Q 020630 45 QSFLPLD-QKVKATVYMTHGYGSDTGWMFQ---KICISYATWGYAVFAADLLGHGRSDGIRCYL-----GDMEKVAASSL 115 (323)
Q Consensus 45 ~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~ 115 (323)
++|.|.+ .++.|+||++||.+++.. .+. .+...+.+.||.|+++|++|++.+....... ........++.
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLH 80 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHH
Confidence 4566654 356799999999997754 332 2444555679999999999987543211100 01123456778
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
.+++.+..+..++..+++|+|||+||.+++.++..+|+. +.+++.+++..
T Consensus 81 ~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~~~~~g~~ 130 (212)
T TIGR01840 81 QLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDV-FAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchh-heEEEeecCCc
Confidence 888888877777778999999999999999999999998 99988887654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.3e-19 Score=139.06 Aligned_cols=247 Identities=19% Similarity=0.227 Sum_probs=136.7
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i 118 (323)
.+.|...+.. .|+|+++||++++.. .|......+... .|+++.+|+||||.|. .. .......++++..++
T Consensus 11 ~~~~~~~~~~----~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~ 82 (282)
T COG0596 11 RLAYREAGGG----GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALL 82 (282)
T ss_pred EEEEeecCCC----CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHH
Confidence 4555544433 459999999998866 555532233321 1899999999999997 11 224555588899999
Q ss_pred HHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchh------H---HHHHHhhcc--cc
Q 020630 119 KHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS------K---LHLFMYGLL--FG 187 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~------~---~~~~~~~~~--~~ 187 (323)
+.+... +++++|||+||.+++.++.++|+. ++++|++++........... . ......... ..
T Consensus 83 ~~~~~~------~~~l~G~S~Gg~~~~~~~~~~p~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (282)
T COG0596 83 DALGLE------KVVLVGHSMGGAVALALALRHPDR-VRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAA 155 (282)
T ss_pred HHhCCC------ceEEEEecccHHHHHHHHHhcchh-hheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhh
Confidence 877754 699999999999999999999998 99999999765411000000 0 000000000 00
Q ss_pred cccccccCC-Ccccc-------cccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCC
Q 020630 188 LADTWAAMP-DNKMV-------GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 188 ~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
......... ..... ........ .......................... ........+++|+++++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~d 232 (282)
T COG0596 156 FAALLAALGLLAALAAAARAGLAEALRAPL-LGAAAAAFARAARADLAAALLALLDR--DLRAALARITVPTLIIHGEDD 232 (282)
T ss_pred hhhhhhcccccccccccchhcccccccccc-chhHhhhhhhhcccccchhhhccccc--ccchhhccCCCCeEEEecCCC
Confidence 000000000 00000 00000000 00000000000000000000000000 123445677899999999999
Q ss_pred cccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.+.|......+.+.+.. ..++.+++++||..++++|. .+.+.+.+|
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~----~~~~~i~~~ 278 (282)
T COG0596 233 PVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPE----AFAAALLAF 278 (282)
T ss_pred CcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHH----HHHHHHHHH
Confidence 66666555666666622 48999999999999977774 455555553
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-19 Score=133.16 Aligned_cols=185 Identities=18% Similarity=0.205 Sum_probs=113.7
Q ss_pred CCceEEEEecCCCCCcchhhHHHHH-HHhcCCcEEEEecccc------CcC---CCCC-----CCC---CCChHHHHhhH
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICI-SYATWGYAVFAADLLG------HGR---SDGI-----RCY---LGDMEKVAASS 114 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~-~l~~~g~~vi~~d~~G------~G~---s~~~-----~~~---~~~~~~~~~d~ 114 (323)
+..++||++||+|.+.. .+..+.. .+......++.+.-|. .|. +.-. ... ...+...++.+
T Consensus 12 ~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp T-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 66899999999998875 5555544 2333457777775442 222 1111 000 11234445566
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccccc
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
.++|+..... .++..+++++|+|+||.+|+.++.++|.. +.++|.+++..........
T Consensus 91 ~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~-~~gvv~lsG~~~~~~~~~~-------------------- 148 (216)
T PF02230_consen 91 DELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEP-LAGVVALSGYLPPESELED-------------------- 148 (216)
T ss_dssp HHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSST-SSEEEEES---TTGCCCHC--------------------
T ss_pred HHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcC-cCEEEEeeccccccccccc--------------------
Confidence 6777765433 35677999999999999999999999998 9999999976542211000
Q ss_pred CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHh
Q 020630 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 274 (323)
...... ++|++++||..|.++|.+.++...+.+
T Consensus 149 ---------------------------------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L 181 (216)
T PF02230_consen 149 ---------------------------------------------RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFL 181 (216)
T ss_dssp ---------------------------------------------CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccC--CCcEEEEecCCCCcccHHHHHHHHHHH
Confidence 001111 689999999999999999988888887
Q ss_pred c--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 275 S--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 275 ~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
. +.++++..+++.||... .+..+.+.+||++++
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~--------~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEIS--------PEELRDLREFLEKHI 216 (216)
T ss_dssp HCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHHH-
T ss_pred HhcCCCEEEEEcCCCCCCCC--------HHHHHHHHHHHhhhC
Confidence 4 23578999999999998 346778889998763
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-18 Score=135.98 Aligned_cols=242 Identities=16% Similarity=0.226 Sum_probs=146.2
Q ss_pred cceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCC---CcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCC
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS---DTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
.++..+...+|.+..+.|.|.. ...|+||++||.|. +.. .+..+++.|++ .|+.|+++|+|...+..
T Consensus 57 ~~~~~i~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~------- 127 (318)
T PRK10162 57 TRAYMVPTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEAR------- 127 (318)
T ss_pred EEEEEEecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCC-------
Confidence 3455666666788889998864 45789999999873 333 56778888877 49999999999654322
Q ss_pred ChHHHHhhHHHHHHHHHh---hCCCCCCCEEEEEechhHHHHHHHHhhc------CCCCeeEEEEccCccCCCCCCchhH
Q 020630 106 DMEKVAASSLSFFKHVRH---SEPYRDLPAFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~il~~~~~~~~~~~~~~~ 176 (323)
+....+|+.++++++.. +.+++..+++|+|+|+||.+|+.++... +.. +++++++.|..+..... .
T Consensus 128 -~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~-~~~~vl~~p~~~~~~~~--s- 202 (318)
T PRK10162 128 -FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGK-VAGVLLWYGLYGLRDSV--S- 202 (318)
T ss_pred -CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccC-hhheEEECCccCCCCCh--h-
Confidence 22234555555555533 2334466999999999999999988753 245 89999999877643210 0
Q ss_pred HHHHHhhcccccccccccCCCcccccccccChhhHHH---hhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEE
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV---IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
..... ..+.. +........ +..+.... ..+.... ....+.+--.|+++
T Consensus 203 -~~~~~-------~~~~~----------l~~~~~~~~~~~y~~~~~~~-~~p~~~p----------~~~~l~~~lPp~~i 253 (318)
T PRK10162 203 -RRLLG-------GVWDG----------LTQQDLQMYEEAYLSNDADR-ESPYYCL----------FNNDLTRDVPPCFI 253 (318)
T ss_pred -HHHhC-------CCccc----------cCHHHHHHHHHHhCCCcccc-CCcccCc----------chhhhhcCCCCeEE
Confidence 00000 00000 000000000 00000000 0000000 00112122359999
Q ss_pred EeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccC-CchhHHHHHHHHHHHHHHHHh
Q 020630 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|+.|.+.+ ..+.+.+++. +..+++++++|..|.+.... ..+..++..+.+.+||.+.++
T Consensus 254 ~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 254 AGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 9999999864 5667777663 34589999999999886432 234466788888999988753
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-19 Score=130.19 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=98.8
Q ss_pred ecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCC
Q 020630 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEP 126 (323)
Q Consensus 47 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 126 (323)
..|.+ .+..+||-+||.++++. .|..+.+.|.+.|.++|.+++||+|.+++.+...++-.+-..-+.++++.+..+
T Consensus 28 ~~~~g-s~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-- 103 (297)
T PF06342_consen 28 SLPSG-SPLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-- 103 (297)
T ss_pred cCCCC-CCceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC--
Confidence 33443 45669999999999987 899999999999999999999999999998888888899999999999999986
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
.+++++|||.||-.|+.+|..+| ..++++++|...-.
T Consensus 104 ---~~~i~~gHSrGcenal~la~~~~---~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 104 ---GKLIFLGHSRGCENALQLAVTHP---LHGLVLINPPGLRP 140 (297)
T ss_pred ---CceEEEEeccchHHHHHHHhcCc---cceEEEecCCcccc
Confidence 38999999999999999999985 66999998876533
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-19 Score=152.46 Aligned_cols=131 Identities=19% Similarity=0.260 Sum_probs=105.0
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc--hhh-HHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMF-QKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
+++.|| +|++..+.|.+.++.|+||++||++.+.. +.+ ......|+++||.|+++|+||+|.|.+..... + ...
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~ 78 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDE 78 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-ccc
Confidence 356789 99999999876567899999999997642 111 22456788899999999999999998764432 2 567
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
++|+.++|+++..+.. ...+++++|+|+||.+++.+|..+|+. ++++|..++..+..
T Consensus 79 ~~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~-l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 79 AADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPA-LRAIAPQEGVWDLY 135 (550)
T ss_pred chHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCc-eeEEeecCcccchh
Confidence 8999999999987632 246999999999999999999998888 99999988876543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-18 Score=149.11 Aligned_cols=255 Identities=13% Similarity=0.064 Sum_probs=162.1
Q ss_pred CCccceeEEecCCC-cEEE-EEecCCC--CCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCC--
Q 020630 27 GVRNGKEYFETPNG-KLFT-QSFLPLD--QKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDG-- 99 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~-~~~~~~~--~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~-- 99 (323)
....+...+++.|| +|.+ .++.+.. .++.|+||++||..+.. ...|......|+++||.|+.++.||-|+-..
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 44667788999999 9997 4554531 34579999999987653 2356666678889999999999998665431
Q ss_pred -CCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 100 -IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 100 -~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
.......-....+|+.+.++++..+...+..++.++|.|.||+++..++.++|++ ++++|+..|..++...+..
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl-f~A~v~~vp~~D~~~~~~~---- 567 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL-FHGVIAQVPFVDVVTTMLD---- 567 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh-eeEEEecCCchhHhhhccc----
Confidence 1110001113357788888888777667788999999999999999999999999 9999999998774321100
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc-EEEEeeC
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVHGT 257 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~ 257 (323)
..+..... ....... ..++... .++.... ....+.+++.| +|+++|.
T Consensus 568 -------~~~p~~~~---~~~e~G~-p~~~~~~--------------------~~l~~~S-P~~~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 568 -------ESIPLTTG---EFEEWGN-PQDPQYY--------------------EYMKSYS-PYDNVTAQAYPHLLVTTGL 615 (686)
T ss_pred -------CCCCCChh---HHHHhCC-CCCHHHH--------------------HHHHHcC-chhccCccCCCceeEEecC
Confidence 00000000 0000000 0001011 1111111 12445667889 5677999
Q ss_pred CCcccCchhHHHHHHHhc--CCCCcEEEe---cCCCccccccCCchhHHHHHHHHHHHHHHHHhhcCC
Q 020630 258 ADGVTCPTSSKLLYEKAS--SADKSIKIY---DGMYHSLIQGEPDENANLVLKDMREWIDERVERCGP 320 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~~ 320 (323)
+|.-||+..+.++..++. +.+.+++++ +++||..- +...... +-......|+-..+....|
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~-~~r~~~~-~~~A~~~aFl~~~~~~~~~ 681 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK-SGRFKSY-EGVAMEYAFLIALAQGTLP 681 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC-cCHHHHH-HHHHHHHHHHHHHhCCcCC
Confidence 999999999999998884 234567777 89999954 2222222 2233456777777665544
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.3e-18 Score=126.90 Aligned_cols=263 Identities=11% Similarity=0.092 Sum_probs=150.9
Q ss_pred eEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHH-----HHHHhcCCcEEEEeccccCcCCCC--CCC-CC
Q 020630 33 EYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKI-----CISYATWGYAVFAADLLGHGRSDG--IRC-YL 104 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~g~~vi~~d~~G~G~s~~--~~~-~~ 104 (323)
+.+.+.-|.|++.++|..+ +.+|++|-.|..|.+....|..+ ...+.++ |.++-+|.||+..-.. +.+ ..
T Consensus 2 h~v~t~~G~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEEETTEEEEEEEESS---TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT---
T ss_pred ceeccCceEEEEEEEecCC-CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccc
Confidence 4677888899999999865 46999999999998865345543 3455555 9999999999976543 222 23
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++.+++++++..++++++.+ .++-+|-..|++|..++|..+|++ |.++||+++....... ..|...++...
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~-V~GLiLvn~~~~~~gw--~Ew~~~K~~~~ 150 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPER-VLGLILVNPTCTAAGW--MEWFYQKLSSW 150 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGG-EEEEEEES---S---H--HHHHHHHHH--
T ss_pred cCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccc-eeEEEEEecCCCCccH--HHHHHHHHhcc
Confidence 58999999999999999987 799999999999999999999999 9999999987653321 22222222211
Q ss_pred ccccccccccCCCcccccccc------cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCC
Q 020630 185 LFGLADTWAAMPDNKMVGKAI------KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.-... .+.......++...+ .+......+...............+...+....++....+...||+|++.|+.
T Consensus 151 ~L~~~-gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~ 229 (283)
T PF03096_consen 151 LLYSY-GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDN 229 (283)
T ss_dssp ------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETT
T ss_pred ccccc-ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecC
Confidence 00000 010000001111111 11111111111111111112233333344444556666777789999999999
Q ss_pred CcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.+ +.+.++..++....+++..++++|=... ++.+.++.+.+.=|++.
T Consensus 230 Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~----eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 230 SPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVL----EEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp STTH--HHHHHHHHHS-CCCEEEEEETT-TT-HH----HH-HHHHHHHHHHHHHH
T ss_pred Ccch--hhHHHHHhhcCcccceEEEecccCCccc----ccCcHHHHHHHHHHHcc
Confidence 8764 5667888888656678999999999998 55567788888888864
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-18 Score=123.23 Aligned_cols=225 Identities=18% Similarity=0.203 Sum_probs=139.2
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH-HHhhCCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH-VRHSEPYRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~-l~~~~~~~~~~ 131 (323)
..+..++++|-.|+++. .|+.+...|... +.++++++||+|..-..+.. .+++++++.+...+.. .. +.+
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~~------d~P 75 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPLL------DAP 75 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhccccC------CCC
Confidence 34778899998888887 888888888764 99999999999987655443 3889988888887774 32 458
Q ss_pred EEEEEechhHHHHHHHHhhcCCC--CeeEEEEccCccCCCCCCc--hhHHHHHHhhcccccccccccCCCcccccccccC
Q 020630 132 AFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~il~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+.++||||||++|.++|.+.... .+.++.+.+.......... ....-..+...+..+... ....+.+
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~---------p~e~led 146 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGT---------PPELLED 146 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCC---------ChHHhcC
Confidence 99999999999999999874221 1455665554332111100 000000111111000000 0011111
Q ss_pred hhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH-hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC
Q 020630 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ-DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
+....+.. ...+.-+.....+. ..-..++||+.++.|++|..+..+....+.+..+ ...++..++|
T Consensus 147 ~El~~l~L------------PilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdG 213 (244)
T COG3208 147 PELMALFL------------PILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDG 213 (244)
T ss_pred HHHHHHHH------------HHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecC
Confidence 11111110 01111111111111 1225789999999999999999999998988874 3689999996
Q ss_pred CCccccccCCchhHHHHHHHHHHHHHH
Q 020630 287 MYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
||++. .+..+++...|.+.+..
T Consensus 214 -gHFfl----~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 -GHFFL----NQQREEVLARLEQHLAH 235 (244)
T ss_pred -cceeh----hhhHHHHHHHHHHHhhh
Confidence 89999 45556677777766653
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.7e-18 Score=129.86 Aligned_cols=258 Identities=13% Similarity=0.139 Sum_probs=155.8
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc--h--------hhHHHH---HHHhcCCcEEEEeccccCc-CCCCCC----C
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--W--------MFQKIC---ISYATWGYAVFAADLLGHG-RSDGIR----C 102 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~--------~~~~~~---~~l~~~g~~vi~~d~~G~G-~s~~~~----~ 102 (323)
.|.|..|+.-+.....+||++|++.+++. - .|+.++ +.+.-..|.||+.|..|.. .|+++. .
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~ 116 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG 116 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC
Confidence 89999999876555679999999988532 0 244332 1233345999999999865 444321 1
Q ss_pred --------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEE-EEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc
Q 020630 103 --------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 103 --------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~ 173 (323)
...++.+++.--..+++.++++ ++. +||-||||+.|+.++..+|++ |.++|.+++.........
T Consensus 117 g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~------~l~avvGgSmGGMqaleWa~~yPd~-V~~~i~ia~~~r~s~~~i 189 (368)
T COG2021 117 GKPYGSDFPVITIRDMVRAQRLLLDALGIK------KLAAVVGGSMGGMQALEWAIRYPDR-VRRAIPIATAARLSAQNI 189 (368)
T ss_pred CCccccCCCcccHHHHHHHHHHHHHhcCcc------eEeeeeccChHHHHHHHHHHhChHH-HhhhheecccccCCHHHH
Confidence 2246778887778888999876 565 999999999999999999999 999999887654332111
Q ss_pred hhHHHHHHhhcccccccccc--------------------------------cCCCccccccccc----ChhhHHHhhcC
Q 020630 174 PSKLHLFMYGLLFGLADTWA--------------------------------AMPDNKMVGKAIK----DPEKLKVIASN 217 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~----~~~~~~~~~~~ 217 (323)
. +..+....-..-+.|. ....+........ .......+...
T Consensus 190 a---~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~q 266 (368)
T COG2021 190 A---FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQ 266 (368)
T ss_pred H---HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHH
Confidence 1 1111111000011110 0000000000000 01111111111
Q ss_pred CcccCCCCCchhHHHHHHhhH---------HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEec-CC
Q 020630 218 PRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD-GM 287 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 287 (323)
-..+........+..+.+..+ ++...++++++|++++.-+.|.++|++..+.+.+.+....+ +.+++ ..
T Consensus 267 g~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~ 345 (368)
T COG2021 267 GDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPY 345 (368)
T ss_pred HHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCC
Confidence 122222222333333333322 23344788999999999999999999999999999953333 65554 57
Q ss_pred CccccccCCchhHHHHHHHHHHHHHH
Q 020630 288 YHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 288 gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
||..++.+. +.+...|..||+.
T Consensus 346 GHDaFL~e~----~~~~~~i~~fL~~ 367 (368)
T COG2021 346 GHDAFLVES----EAVGPLIRKFLAL 367 (368)
T ss_pred Cchhhhcch----hhhhHHHHHHhhc
Confidence 999996554 4477788888763
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=136.09 Aligned_cols=265 Identities=12% Similarity=0.089 Sum_probs=158.9
Q ss_pred cccccCCccceeEEecCCCcEEEEEecCCC-CCCceEEEEecCCCCCcchhh-----HHHHHHHhcCCcEEEEeccccCc
Q 020630 22 YYTSQGVRNGKEYFETPNGKLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMF-----QKICISYATWGYAVFAADLLGHG 95 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G 95 (323)
|.....+..+...+...++.+..+.|.|.. ...+.+||+++++- +..+.+ +.+++.|.++||.|+.+|+++-+
T Consensus 181 F~vG~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~ 259 (560)
T TIGR01839 181 FEVGKNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQI-NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPD 259 (560)
T ss_pred cccCCCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhh-hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCC
Confidence 444455555566666666655556666754 24568999999988 443344 57999999999999999999876
Q ss_pred CCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHH----HHhhcCCCCeeEEEEccCccCCCCC
Q 020630 96 RSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATML----MYFQSEPNTWTGLIFSAPLFVIPEN 171 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~~~v~~~il~~~~~~~~~~ 171 (323)
.... ..+++++++.+.++|+.+....+ ..++.++|+|+||.++.. +++++++.+|++++++.+..++...
T Consensus 260 ~~~r----~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 260 KAHR----EWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred hhhc----CCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCC
Confidence 5532 23789999999999999987765 668999999999999997 7788886339999999888876542
Q ss_pred Cchh-H----HHHHHhhcc--cccccc------cccCCCcccc-----ccc-c-cChhhHH--HhhcCCcccCCCCCchh
Q 020630 172 MKPS-K----LHLFMYGLL--FGLADT------WAAMPDNKMV-----GKA-I-KDPEKLK--VIASNPRRYTGKPRVGT 229 (323)
Q Consensus 172 ~~~~-~----~~~~~~~~~--~~~~~~------~~~~~~~~~~-----~~~-~-~~~~~~~--~~~~~~~~~~~~~~~~~ 229 (323)
.... + ........+ .+..+. +.......++ ... . ..+...+ ....+...+..... ..
T Consensus 334 g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~-~e 412 (560)
T TIGR01839 334 SPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFH-GD 412 (560)
T ss_pred CcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHH-HH
Confidence 2111 1 010000000 011110 0000000000 000 0 0000111 11111111111000 11
Q ss_pred HHHHHHhhHHHH----------hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCC
Q 020630 230 MREIARVCQYIQ----------DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEP 296 (323)
Q Consensus 230 ~~~~~~~~~~~~----------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 296 (323)
+..++....... -.+++|+||++++.|+.|.++|++.+..+.+.+.+ +++++..+ +||..-+-+|
T Consensus 413 ~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIggivnp 487 (560)
T TIGR01839 413 LLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQSILNP 487 (560)
T ss_pred HHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCccccccCC
Confidence 111211111011 13678999999999999999999999999998865 47777776 5887654433
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.78 E-value=9e-18 Score=126.95 Aligned_cols=253 Identities=15% Similarity=0.191 Sum_probs=101.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCc--chhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHHHhhH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDT--GWMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
++....+.+........||||.|++... -.+...+++.|.+.||.|+-+-++ |+|.+ +++.-++||
T Consensus 19 ~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI 90 (303)
T PF08538_consen 19 KLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEI 90 (303)
T ss_dssp TTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHH
T ss_pred CCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHH
Confidence 3444555554323577999999998642 225678999998789999998765 45544 799999999
Q ss_pred HHHHHHHHhhCCC--CCCCEEEEEechhHHHHHHHHhhcCC----CCeeEEEEccCccCCCCCCchhHH---HHHHhhcc
Q 020630 115 LSFFKHVRHSEPY--RDLPAFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKPSKL---HLFMYGLL 185 (323)
Q Consensus 115 ~~~i~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~il~~~~~~~~~~~~~~~~---~~~~~~~~ 185 (323)
.++|++++...+. ...+|+|+|||-|+.-+++|+..... ..|+++||-+|..+-......... ........
T Consensus 91 ~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A 170 (303)
T PF08538_consen 91 AQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALA 170 (303)
T ss_dssp HHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHH
T ss_pred HHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHH
Confidence 9999999988421 25699999999999999999987532 339999999998875443322111 22222221
Q ss_pred cccccccccCCCcccccc-----cc-cChh-hHHHhhcCCcccCCCCCchhHHHHHH---hhHHHHhcCCcccccEEEEe
Q 020630 186 FGLADTWAAMPDNKMVGK-----AI-KDPE-KLKVIASNPRRYTGKPRVGTMREIAR---VCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~-----~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~ 255 (323)
..+... ......+.. .. ..+. ..++.. ......-.+++. ..+.+...+.++.+|+|++.
T Consensus 171 ~~~i~~---g~~~~~lp~~~~~~~~~~~PiTA~Rf~S--------L~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~ 239 (303)
T PF08538_consen 171 KELIAE---GKGDEILPREFTPLVFYDTPITAYRFLS--------LASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLY 239 (303)
T ss_dssp HHHHHC---T-TT-GG----GGTTT-SS---HHHHHT---------S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEE
T ss_pred HHHHHc---CCCCceeeccccccccCCCcccHHHHHh--------ccCCCCcccccCCCCCHHHHHHHhccCCCceEEEe
Confidence 111100 000000000 00 0000 001110 000011111111 11335677888999999999
Q ss_pred eCCCcccCchh-HHHHHHHhc---CC---CCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 256 GTADGVTCPTS-SKLLYEKAS---SA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 256 g~~D~~~~~~~-~~~~~~~~~---~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++|..+|... .+.+.+++. .+ ...--+|+|++|.+--...++..+.+.+.+..||+
T Consensus 240 Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 240 SGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp E--TT-----------------------------------------------------------
T ss_pred cCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 99999998643 233444331 11 12345899999999843333345667888888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-17 Score=120.26 Aligned_cols=267 Identities=10% Similarity=0.066 Sum_probs=169.7
Q ss_pred cceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHH-----HHHHhcCCcEEEEeccccCcCCCC--CCC
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKI-----CISYATWGYAVFAADLLGHGRSDG--IRC 102 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~g~~vi~~d~~G~G~s~~--~~~ 102 (323)
.+++.+.+..|.+++.++|..+ +++|++|-.|.+|.+....|+.+ +..+.++ |.++-+|.||+-.-.. +.+
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~-~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPK-GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred ceeeeeccccccEEEEEecCCC-CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 4678888889999999999876 47889999999998875445543 3456676 9999999999865432 233
Q ss_pred -CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHH
Q 020630 103 -YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 103 -~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~ 181 (323)
..++.+++++++..+++++..+ .++-+|-..|++|..++|..||++ |-++||+++....... ..|...++
T Consensus 100 y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~r-V~GLvLIn~~~~a~gw--iew~~~K~ 170 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPER-VLGLVLINCDPCAKGW--IEWAYNKV 170 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhh-eeEEEEEecCCCCchH--HHHHHHHH
Confidence 2358999999999999999976 789999999999999999999999 9999999986653322 22222222
Q ss_pred hhcc-c--ccccccccCCCccccc-ccc-cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC----cccccEE
Q 020630 182 YGLL-F--GLADTWAAMPDNKMVG-KAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS----KVTVPFL 252 (323)
Q Consensus 182 ~~~~-~--~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~P~l 252 (323)
...+ . .+............+. ... .+....+.+........+...+..+.+.+....++..... .++||+|
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vl 250 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVL 250 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEE
Confidence 2100 0 0000000000000000 000 1111222222211111122222223333332222222222 4569999
Q ss_pred EEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.|++.+.+ +.+.++..++...+..+..+.++|-.+..++| .++.+.+.=|++.
T Consensus 251 lvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP----~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 251 LVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQP----GKLAEAFKYFLQG 305 (326)
T ss_pred EEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCc----hHHHHHHHHHHcc
Confidence 9999998775 45666777775457889999999999885555 5688888888764
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-17 Score=119.81 Aligned_cols=244 Identities=18% Similarity=0.175 Sum_probs=162.1
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCCC-CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCC----
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG---- 99 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~---- 99 (323)
..++.-+.+++..+| +|..+...|... +..|.||-.||++++.. .|..+.. ++..||.|+.+|.||.|.|+.
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-Ccccccc-ccccceeEEEEecccCCCccccCCC
Confidence 344445677888999 999999999765 66799999999998865 5655443 556799999999999998842
Q ss_pred CCCC----------------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 100 IRCY----------------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 100 ~~~~----------------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
.+.. .+-+.....|+..+++.+..-..++.+++.+.|.|.||.+++.+++..|. |+++++.-
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r--ik~~~~~~ 207 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR--IKAVVADY 207 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh--hhcccccc
Confidence 1110 11234456788888888888888888999999999999999999998776 99999988
Q ss_pred CccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhc
Q 020630 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
|...-..... .. ... -............... -.....-+.. -+....
T Consensus 208 Pfl~df~r~i-------------------~~-~~~------~~ydei~~y~k~h~~~------e~~v~~TL~y-fD~~n~ 254 (321)
T COG3458 208 PFLSDFPRAI-------------------EL-ATE------GPYDEIQTYFKRHDPK------EAEVFETLSY-FDIVNL 254 (321)
T ss_pred cccccchhhe-------------------ee-ccc------CcHHHHHHHHHhcCch------HHHHHHHHhh-hhhhhH
Confidence 8765221100 00 000 0000011111111000 0000000111 113345
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..++++|+|+..|--|.++|+...-.+++.+.. .+++.+++.-+|... |. -..+.+..|+...
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~---p~----~~~~~~~~~l~~l 317 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG---PG----FQSRQQVHFLKIL 317 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC---cc----hhHHHHHHHHHhh
Confidence 577899999999999999999999999999964 367788887778877 22 1334466776643
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-17 Score=116.32 Aligned_cols=259 Identities=17% Similarity=0.228 Sum_probs=155.2
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC--CCCCChHH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR--CYLGDMEK 109 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~--~~~~~~~~ 109 (323)
..+...|| .+....|-..+ +....|++-.+.|.. ..+|+.++..++++||.|+++|+||.|.|.... ...+.+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-~~~g~~~va~a~Gv~-~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-KASGRLVVAGATGVG-QYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCC-CCCCcEEecccCCcc-hhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 56788999 99998887654 223344444444443 348999999999999999999999999998543 22346666
Q ss_pred HH-hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHH--HHHHhhccc
Q 020630 110 VA-ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL--HLFMYGLLF 186 (323)
Q Consensus 110 ~~-~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~--~~~~~~~~~ 186 (323)
++ .|+.+.++.++...+ ..+...+|||+||.+.-.+. +++. ..+....+........+..... ...+.....
T Consensus 86 wA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~-~~~k--~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~ 160 (281)
T COG4757 86 WARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLG-QHPK--YAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVG 160 (281)
T ss_pred hhhcchHHHHHHHHhhCC--CCceEEeeccccceeecccc-cCcc--cceeeEeccccccccchhhhhcccceeeccccc
Confidence 66 799999999988554 66899999999999765544 4453 5555555544443332221110 000001111
Q ss_pred ccccccccCCCccccccc--ccChhhHHH--hhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCccc
Q 020630 187 GLADTWAAMPDNKMVGKA--IKDPEKLKV--IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.....|.......++... +.....+++ ....+..+...+.. ....+..+.+++|++++...+|+.+
T Consensus 161 p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~----------~~~~q~yaaVrtPi~~~~~~DD~w~ 230 (281)
T COG4757 161 PPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAM----------RNYRQVYAAVRTPITFSRALDDPWA 230 (281)
T ss_pred cchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhH----------hHHHHHHHHhcCceeeeccCCCCcC
Confidence 111111111111111111 111111111 11112111111111 1134455678999999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecC----CCccccccCCchhHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDG----MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|+...+.+.+...+...+...++. .||+..+-++ .|.+.+.+++|+
T Consensus 231 P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~---~Ealwk~~L~w~ 280 (281)
T COG4757 231 PPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREP---FEALWKEMLGWF 280 (281)
T ss_pred CHHHHHHHHHhhhcCcccceecCcccCcccchhhhccc---hHHHHHHHHHhh
Confidence 999999999888555556666654 4899987555 256777787775
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-17 Score=116.18 Aligned_cols=231 Identities=14% Similarity=0.129 Sum_probs=125.7
Q ss_pred eeEEecCCC-cEEEEEecCCCC--CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-cCCCCCCCCCCCh
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-GRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~~~ 107 (323)
++.+...+| +|+.+.-.|... ..+++||+..|++.... .+..++.+|+.+||+|+.+|.-.| |.|++.-.. +++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cch
Confidence 456778889 999999888763 34589999999998776 899999999999999999998765 888876544 388
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
....+++..+++++.... ..++.|+.-|+.|.+|...|.+ .+ +.-+|..-+..++............+......
T Consensus 82 s~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~-i~--lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~ 155 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAAD-IN--LSFLITAVGVVNLRDTLEKALGYDYLQLPIEQ 155 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S----SEEEEES--S-HHHHHHHHHSS-GGGS-GGG
T ss_pred HHhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhc-cC--cceEEEEeeeeeHHHHHHHHhccchhhcchhh
Confidence 888999999999999553 5679999999999999999985 33 67777766655422111100000000000000
Q ss_pred cccccccCCCcccccccccCh-hhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh
Q 020630 188 LADTWAAMPDNKMVGKAIKDP-EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
+... ..+....+... .....+..... ........++.+++|++.+++++|.+|....
T Consensus 156 lp~d------ldfeGh~l~~~vFv~dc~e~~w~----------------~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~e 213 (294)
T PF02273_consen 156 LPED------LDFEGHNLGAEVFVTDCFEHGWD----------------DLDSTINDMKRLSIPFIAFTANDDDWVKQSE 213 (294)
T ss_dssp --SE------EEETTEEEEHHHHHHHHHHTT-S----------------SHHHHHHHHTT--S-EEEEEETT-TTS-HHH
T ss_pred CCCc------ccccccccchHHHHHHHHHcCCc----------------cchhHHHHHhhCCCCEEEEEeCCCccccHHH
Confidence 0000 00001001000 11111111110 0122345678889999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 267 SKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
..++...+.++.++++.++|+.|.+-
T Consensus 214 V~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 214 VEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHhcCCCceeEEEecCccchhh
Confidence 99999888778889999999999987
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=103.89 Aligned_cols=78 Identities=36% Similarity=0.625 Sum_probs=71.6
Q ss_pred C-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHH
Q 020630 40 G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 40 g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i 118 (323)
| +|+++.|.|+++ ++.+|+++||++.++. .|..+++.|+++||.|+++|+||||.|.+......+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 5 899999999874 7999999999998887 899999999999999999999999999988888789999999999887
Q ss_pred H
Q 020630 119 K 119 (323)
Q Consensus 119 ~ 119 (323)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=127.50 Aligned_cols=128 Identities=17% Similarity=0.228 Sum_probs=98.7
Q ss_pred CC-cEEEEEecC--CCCCCceEEEEecCCCCCcchhhHH---------HHHHHhcCCcEEEEeccccCcCCCCCCCCCCC
Q 020630 39 NG-KLFTQSFLP--LDQKVKATVYMTHGYGSDTGWMFQK---------ICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 39 ~g-~l~~~~~~~--~~~~~~~~vv~~hG~~~~~~~~~~~---------~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~ 106 (323)
|| +|.+.+|.| ...++.|+||..|+++......... ....|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 78 999999999 6667889999999999653211111 112388999999999999999999876542
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~ 170 (323)
.....+|..++|+++..+ +.++.+|.++|.|++|..++.+|...|.. +++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~-LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPH-LKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TT-EEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCC-ceEEEecccCCcccc
Confidence 566789999999999988 66677999999999999999999977777 999999888776654
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=116.25 Aligned_cols=180 Identities=16% Similarity=0.148 Sum_probs=124.5
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEecccc--CcCCC---CCCCCCCC---hHHHHhhHHHHHHHHHhh
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLG--HGRSD---GIRCYLGD---MEKVAASSLSFFKHVRHS 124 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G--~G~s~---~~~~~~~~---~~~~~~d~~~~i~~l~~~ 124 (323)
...|+||++||+|++.. .+-.+.+.+..+ +.++.+-=+- .|.-. ......++ ...-++.+.++++.+..+
T Consensus 16 p~~~~iilLHG~Ggde~-~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDEL-DLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChh-hhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 55779999999998755 555555555554 6666553110 00000 00111122 333345566777777777
Q ss_pred CCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccccccc
Q 020630 125 EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
.+.+..+++++|+|.||++++.+..++|.. ++++|+.++........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~-~~~ail~~g~~~~~~~~-------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGL-FAGAILFSGMLPLEPEL-------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchh-hccchhcCCcCCCCCcc--------------------------------
Confidence 777788999999999999999999999998 99999999876533110
Q ss_pred ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEE
Q 020630 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIK 282 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 282 (323)
....-..|+++++|+.|+++|...+.++.+.+. +.+++..
T Consensus 141 --------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~ 182 (207)
T COG0400 141 --------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVR 182 (207)
T ss_pred --------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEE
Confidence 001125799999999999999999888888773 3567778
Q ss_pred EecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 283 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++ .||... .+..+.+.+|+.+.
T Consensus 183 ~~~-~GH~i~--------~e~~~~~~~wl~~~ 205 (207)
T COG0400 183 WHE-GGHEIP--------PEELEAARSWLANT 205 (207)
T ss_pred Eec-CCCcCC--------HHHHHHHHHHHHhc
Confidence 888 799998 33556677788764
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=126.40 Aligned_cols=246 Identities=10% Similarity=0.025 Sum_probs=149.9
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
.|+||++..+.++.....+.+++.|.. |+.|+..|+.--+..+..... .+++++++.+.++++.++ . ++++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~G------~-~v~l 172 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFLG------P-DIHV 172 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHhC------C-CCcE
Confidence 379999999886654355778999998 999999999877755432333 388999988888888773 2 4899
Q ss_pred EEechhHHHHHHHHhhc-----CCCCeeEEEEccCccCCCCCCchhHHH------HHHhhcc-cc-----------cccc
Q 020630 135 FGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLH------LFMYGLL-FG-----------LADT 191 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~-----p~~~v~~~il~~~~~~~~~~~~~~~~~------~~~~~~~-~~-----------~~~~ 191 (323)
+|+|+||.+++.+++.. |.+ ++++++++++.++.........+ ..+.... .. ..+.
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~-~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQ-PRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCC-cceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 99999999977666654 566 99999999988876532221111 1111111 00 0000
Q ss_pred ccc-------CCCc------ccccccc-cC-hhhHH---HhhcCCcccCCCCCchhHHHHH----HhhHHH---------
Q 020630 192 WAA-------MPDN------KMVGKAI-KD-PEKLK---VIASNPRRYTGKPRVGTMREIA----RVCQYI--------- 240 (323)
Q Consensus 192 ~~~-------~~~~------~~~~~~~-~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------- 240 (323)
+.. .+.+ .++.... .+ +.... +.... ... .......+.+.. ......
T Consensus 252 ~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y-~d~-~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~ 329 (406)
T TIGR01849 252 FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEY-LAV-MDMTAEFYLQTIDVVFQQFLLPQGKFIVEGK 329 (406)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHh-hhc-cCCcHHHHHHHHHHHHHhCCccCCcEEECCE
Confidence 000 0000 0000000 00 00000 00000 000 000111111111 111000
Q ss_pred HhcCCccc-ccEEEEeeCCCcccCchhHHHHHHHh---cCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 241 QDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKA---SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 241 ~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.-.+++|+ +|+|.+.|++|.++|++.+..+.+.+ ++.+.+....+++||...+... ...++++..|.+||.+
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~-r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS-RFREEIYPLVREFIRR 405 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh-hhhhhhchHHHHHHHh
Confidence 01357888 99999999999999999999988875 4455667788889999997654 5678899999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.3e-16 Score=124.59 Aligned_cols=292 Identities=14% Similarity=0.065 Sum_probs=175.8
Q ss_pred ccccccccCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhh------HHHHHHHhcCCcEEEEecc
Q 020630 19 EEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF------QKICISYATWGYAVFAADL 91 (323)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~------~~~~~~l~~~g~~vi~~d~ 91 (323)
..+.....+.+.|++.+.+.|| -|...+..... +++|+|++.||+-+++. .| +.++-.|+++||.|..-+.
T Consensus 37 ~~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~ 114 (403)
T KOG2624|consen 37 TPEIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNN 114 (403)
T ss_pred HHHHHHHcCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecC
Confidence 3455678899999999999999 66666554443 77999999999987765 34 3466678999999999999
Q ss_pred ccCcCCCCC--------C-CCCCChHHHH-hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC--CCeeEE
Q 020630 92 LGHGRSDGI--------R-CYLGDMEKVA-ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP--NTWTGL 159 (323)
Q Consensus 92 ~G~G~s~~~--------~-~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~v~~~ 159 (323)
||...|... . ....++++++ .|+.+.|+++....+ ..+++.+|||.|+...+.++...|+ .+|+..
T Consensus 115 RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~ 192 (403)
T KOG2624|consen 115 RGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSF 192 (403)
T ss_pred cCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhhee
Confidence 998777521 1 2234677755 799999999988754 5699999999999999998888755 239999
Q ss_pred EEccCccCCCCCCchhHH-HHHH---hhcccccccccccCCCcc----cccccccCh-hhHH----------------Hh
Q 020630 160 IFSAPLFVIPENMKPSKL-HLFM---YGLLFGLADTWAAMPDNK----MVGKAIKDP-EKLK----------------VI 214 (323)
Q Consensus 160 il~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~----------------~~ 214 (323)
++++|+............ .... ...+..+.......+... +........ .... +.
T Consensus 193 ~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n 272 (403)
T KOG2624|consen 193 IALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWN 272 (403)
T ss_pred eeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhh
Confidence 999998854411111110 0000 000111111111111111 000000000 0000 00
Q ss_pred hcCC-cccCCCCCchhHHHHHHhhH-------------------------HHHhcCCcccccEEEEeeCCCcccCchhHH
Q 020630 215 ASNP-RRYTGKPRVGTMREIARVCQ-------------------------YIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 215 ~~~~-~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
.... ..+...+.......+..... ...-.+.++++|+.+.+|+.|.++.++.+.
T Consensus 273 ~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~ 352 (403)
T KOG2624|consen 273 TTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVL 352 (403)
T ss_pred hcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHH
Confidence 0000 00111111111111111110 011235677999999999999999999999
Q ss_pred HHHHHhcCCCCcEE-EecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 269 LLYEKASSADKSIK-IYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 269 ~~~~~~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+...+........ .+++-.|.-++- ..+..+.+.+.|.+.++...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~ynHlDFi~-g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 353 ILLLVLPNSVIKYIVPIPEYNHLDFIW-GLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHhcccccccccccCCCccceeeee-ccCcHHHHHHHHHHHHHhhh
Confidence 88877732222122 278888987742 23556778888888877554
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=127.54 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=86.5
Q ss_pred CceEEEEecCCCCCcch-hhHH-HHHHHhc--CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCC
Q 020630 54 VKATVYMTHGYGSDTGW-MFQK-ICISYAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~-~~~~-~~~~l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 129 (323)
.+|++|++||++.+..+ .|.. +.+.|.. .+|+||++|++|+|.+..+.... ....+++++.++++.+....+...
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~-~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAA-YTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccc-cHHHHHHHHHHHHHHHHHhhCCCC
Confidence 37899999999865321 3443 5555542 25999999999999886543322 456778889999998865433335
Q ss_pred CCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 130 LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
.+++|+||||||.+|..++...|.+ |.++++++|+...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~r-V~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHK-VNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcc-eeEEEEEcCCCCc
Confidence 6899999999999999999999988 9999999987543
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-16 Score=111.51 Aligned_cols=153 Identities=16% Similarity=0.143 Sum_probs=99.8
Q ss_pred EEEecCCCCCcchhhHH-HHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEE
Q 020630 58 VYMTHGYGSDTGWMFQK-ICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFG 136 (323)
Q Consensus 58 vv~~hG~~~~~~~~~~~-~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G 136 (323)
|+++||++++....|.. +.+.|... ++|-..++ ..++.+++...+.+.+..+ .+++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 68999999886445655 55666655 77777665 1126777777777766654 33799999
Q ss_pred echhHHHHHHHH-hhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhh
Q 020630 137 ESMGGAATMLMY-FQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 137 ~S~Gg~~a~~~a-~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
||+|+..+++++ .....+ |++++|++|+........ . .....
T Consensus 62 HSLGc~~~l~~l~~~~~~~-v~g~lLVAp~~~~~~~~~---------------------~---~~~~~------------ 104 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKK-VAGALLVAPFDPDDPEPF---------------------P---PELDG------------ 104 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSS-EEEEEEES--SCGCHHCC---------------------T---CGGCC------------
T ss_pred eCHHHHHHHHHHhhccccc-ccEEEEEcCCCcccccch---------------------h---hhccc------------
Confidence 999999999999 555555 999999998753100000 0 00000
Q ss_pred cCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
+ .......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+..
T Consensus 105 -----f------------------~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 105 -----F------------------TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNA 155 (171)
T ss_dssp -----C------------------TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSG
T ss_pred -----c------------------ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccc
Confidence 0 00112345678899999999999999999999999 588999999999988
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=123.12 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=89.3
Q ss_pred CC-cEEEEEecCCCCCCceEEEEecCCCCCcchhh-HHHHHHH-hcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-QKICISY-ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l-~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
++ .+.+..+.+. +|++|++||++++....| ..+.+.+ ...+|+|+++|+++++.+... ....+...+.+++.
T Consensus 23 ~~~~~~~~~f~~~----~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la 97 (275)
T cd00707 23 DPSSLKNSNFNPS----RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELA 97 (275)
T ss_pred ChhhhhhcCCCCC----CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHH
Confidence 44 5555555543 789999999998762244 3445444 445799999999988433211 11124566678888
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
.+++.+....+.+.++++++||||||.+|..++.+++++ |+++++++|+...
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~-v~~iv~LDPa~p~ 149 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGK-LGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCc-cceeEEecCCccc
Confidence 888888665333356899999999999999999999988 9999999987653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.8e-16 Score=108.94 Aligned_cols=196 Identities=15% Similarity=0.165 Sum_probs=141.3
Q ss_pred EEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccc-cCcCCCCCCC-------CCCChHHHHhh
Q 020630 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLL-GHGRSDGIRC-------YLGDMEKVAAS 113 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~-G~G~s~~~~~-------~~~~~~~~~~d 113 (323)
+..|+.+...+ +..||++.-+.+.....-+..++.++.+||.|+.+|+. |--.+...+. ...+.+....+
T Consensus 28 ldaYv~gs~~~--~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~ 105 (242)
T KOG3043|consen 28 LDAYVVGSTSS--KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKD 105 (242)
T ss_pred eeEEEecCCCC--CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhH
Confidence 55566666542 35777777765554424678899999999999999965 4222221110 01144555688
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+..++++++.+.. ..++.++|++|||-++..+....+. +.+++..-|...-
T Consensus 106 i~~v~k~lk~~g~--~kkIGv~GfCwGak~vv~~~~~~~~--f~a~v~~hps~~d------------------------- 156 (242)
T KOG3043|consen 106 ITAVVKWLKNHGD--SKKIGVVGFCWGAKVVVTLSAKDPE--FDAGVSFHPSFVD------------------------- 156 (242)
T ss_pred HHHHHHHHHHcCC--cceeeEEEEeecceEEEEeeccchh--heeeeEecCCcCC-------------------------
Confidence 9999999997764 6789999999999999998888774 7777776654320
Q ss_pred cCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHH
Q 020630 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
......+++|++++.|+.|.++|+.....+.+.
T Consensus 157 -----------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~ 189 (242)
T KOG3043|consen 157 -----------------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEK 189 (242)
T ss_pred -----------------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHH
Confidence 133456789999999999999999998888888
Q ss_pred hcC-C--CCcEEEecCCCccccc-----cCCc--hhHHHHHHHHHHHHHHHH
Q 020630 274 ASS-A--DKSIKIYDGMYHSLIQ-----GEPD--ENANLVLKDMREWIDERV 315 (323)
Q Consensus 274 ~~~-~--~~~~~~~~~~gH~~~~-----~~~~--~~~~~~~~~i~~fl~~~~ 315 (323)
+.. + +.++.++++.+|.++. +.|+ ...++..+.+..||++.+
T Consensus 190 lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 190 LKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 742 2 2369999999999883 2332 366778889999998875
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-14 Score=106.90 Aligned_cols=183 Identities=16% Similarity=0.210 Sum_probs=120.9
Q ss_pred EEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHh
Q 020630 44 TQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRH 123 (323)
Q Consensus 44 ~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~ 123 (323)
..++.|...+.-|+|||+||+..... .|..+.+.++++||.|+.+|+...+.. ......+++.++++|+..
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHh
Confidence 34566766567899999999997666 589999999999999999997654331 112223444444554433
Q ss_pred h----CC----CCCCCEEEEEechhHHHHHHHHhhc-----CCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc
Q 020630 124 S----EP----YRDLPAFLFGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 124 ~----~~----~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
. .+ .|..++.|+|||-||-+|..++..+ +.+ ++++++++|..+....... .+
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~-~~ali~lDPVdG~~~~~~~--------------~P 141 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLR-FSALILLDPVDGMSKGSQT--------------EP 141 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccc-eeEEEEeccccccccccCC--------------CC
Confidence 1 11 2466899999999999999999887 445 9999999998753321100 00
Q ss_pred ccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCc---------c
Q 020630 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG---------V 261 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~---------~ 261 (323)
. .+. ....--+..+|+++|...-+. -
T Consensus 142 ~--------v~~-------------------------------------~~p~s~~~~~P~lviGtGLg~~~~~~~~~~C 176 (259)
T PF12740_consen 142 P--------VLT-------------------------------------YTPQSFDFSMPALVIGTGLGGEPRNPLFPPC 176 (259)
T ss_pred c--------ccc-------------------------------------CcccccCCCCCeEEEecccCcccccccCCCC
Confidence 0 000 001112346899999777663 2
Q ss_pred cCc-hhHHHHHHHhcCCCCcEEEecCCCccccccCC
Q 020630 262 TCP-TSSKLLYEKASSADKSIKIYDGMYHSLIQGEP 296 (323)
Q Consensus 262 ~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 296 (323)
.|. ..-+++++.+..+ +-..+..+.||+-+++..
T Consensus 177 aP~g~n~~~Ff~~~~~p-~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 177 APAGVNYREFFDECKPP-SWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCCHHHHHHhcCCC-EEEEEeCCCCchHhhcCC
Confidence 222 2356777777544 566777889999998766
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.6e-15 Score=114.62 Aligned_cols=115 Identities=11% Similarity=0.149 Sum_probs=94.6
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcC---CcEEEEeccccCcCCCCC-----CCCCCChHHHHhhHHHHHHHHHhhCC
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATW---GYAVFAADLLGHGRSDGI-----RCYLGDMEKVAASSLSFFKHVRHSEP 126 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~---g~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~i~~l~~~~~ 126 (323)
+..+||++|.+|-.. +|..+.+.|.++ .+.|+++.+.||-.++.. ....++++++++...++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 678999999999888 788888877743 799999999999877755 34567999999999999998887531
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcC---CCCeeEEEEccCccCCCCC
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPEN 171 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~il~~~~~~~~~~ 171 (323)
....+++++|||.|++++++++.+.+ .+ |.+++++-|....-..
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~-V~~~~lLfPTi~~ia~ 127 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFR-VKKVILLFPTIEDIAK 127 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCc-eeEEEEeCCccccccC
Confidence 12669999999999999999999988 45 9999999987654333
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.5e-14 Score=110.97 Aligned_cols=236 Identities=14% Similarity=0.151 Sum_probs=137.1
Q ss_pred cCCC-cEEEEEecC--CCCCCceEEEEecCCCCC---cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 37 TPNG-KLFTQSFLP--LDQKVKATVYMTHGYGSD---TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 37 ~~~g-~l~~~~~~~--~~~~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
..++ .+.++.|.| ......|+||++||.+.. .......+...+...|+.|+++|||-..+- .+...
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~--------~~p~~ 129 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH--------PFPAA 129 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC--------CCCch
Confidence 3445 588899998 333457999999998753 231224455555667999999999944332 44555
Q ss_pred HhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 111 AASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 111 ~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+|+.+.+.++..+ .+.+.+++.++|+|.||.+++.++..-.+. ...+.++++|..+... .....
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~-------- 200 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL-------- 200 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch--------
Confidence 66666666666654 345678999999999999999998764421 2789999999877654 11100
Q ss_pred ccccccccccCCCcccccccccChhhH-HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccC
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
........+ ...... .+............. .....+ ..+.+.. -.|+++++|+.|.+.+
T Consensus 201 --------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-p~~spl------~~~~~~~-lPP~~i~~a~~D~l~~ 260 (312)
T COG0657 201 --------PGYGEADLL----DAAAILAWFADLYLGAAPDRED-PEASPL------ASDDLSG-LPPTLIQTAEFDPLRD 260 (312)
T ss_pred --------hhcCCcccc----CHHHHHHHHHHHhCcCccccCC-CccCcc------ccccccC-CCCEEEEecCCCcchh
Confidence 000000000 000000 000000000000000 000000 0111333 4689999999999987
Q ss_pred chhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 264 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
..+.+.+++. +..+++..+++..|.+..... .........+.+|+.
T Consensus 261 --~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~a~~~~~~~~~~l~ 308 (312)
T COG0657 261 --EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PEARSALRQIAAFLR 308 (312)
T ss_pred --HHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HHHHHHHHHHHHHHH
Confidence 5566666663 345688999999997754333 233444566667766
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.65 E-value=6e-16 Score=120.07 Aligned_cols=140 Identities=20% Similarity=0.184 Sum_probs=92.9
Q ss_pred cccCCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcch---h--------------hHHHHHHHhcCCc
Q 020630 24 TSQGVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW---M--------------FQKICISYATWGY 84 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~---~--------------~~~~~~~l~~~g~ 84 (323)
...+...++..|.+..+ .+..++..|.+ .++-|+||++||-++.... . -..++..|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 45566777888888888 99999999987 5778999999998764321 0 1236788999999
Q ss_pred EEEEeccccCcCCCCCCCC----CCChHHH---------------HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHH
Q 020630 85 AVFAADLLGHGRSDGIRCY----LGDMEKV---------------AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATM 145 (323)
Q Consensus 85 ~vi~~d~~G~G~s~~~~~~----~~~~~~~---------------~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~ 145 (323)
.|+++|.+|+|+....... .++.+.+ +-|...+++++.....++.++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 9999999999998643311 1122222 23556689999998888899999999999999999
Q ss_pred HHHhhcCCCCeeEEEEccCc
Q 020630 146 LMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 146 ~~a~~~p~~~v~~~il~~~~ 165 (323)
.+++..+. |++.|..+-.
T Consensus 242 ~LaALDdR--Ika~v~~~~l 259 (390)
T PF12715_consen 242 WLAALDDR--IKATVANGYL 259 (390)
T ss_dssp HHHHH-TT----EEEEES-B
T ss_pred HHHHcchh--hHhHhhhhhh
Confidence 99999655 8888876643
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.9e-14 Score=101.37 Aligned_cols=182 Identities=16% Similarity=0.144 Sum_probs=106.9
Q ss_pred EEEecCCCCCcc-hhhHHHHHHHhcCC--cEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 58 VYMTHGYGSDTG-WMFQKICISYATWG--YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 58 vv~~hG~~~~~~-~~~~~~~~~l~~~g--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
|+++||+.++.. .-...+.+.+.+.+ ..+.++|++ ...+...+.+.++++....+ .+.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~------~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE------NVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC------CeEE
Confidence 799999998753 13344566666654 456667665 24566667777777776533 5999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|.||||..|..+|.+++- ++ |+++|+...... +...+..-. .... ....
T Consensus 64 iGSSlGG~~A~~La~~~~~---~a-vLiNPav~p~~~---------l~~~iG~~~----~~~~----~e~~--------- 113 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYGL---PA-VLINPAVRPYEL---------LQDYIGEQT----NPYT----GESY--------- 113 (187)
T ss_pred EEEChHHHHHHHHHHHhCC---CE-EEEcCCCCHHHH---------HHHhhCccc----cCCC----Cccc---------
Confidence 9999999999999998864 34 888988753211 111111000 0000 0000
Q ss_pred hcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccccc
Q 020630 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
............+......-..+++++.++.|.+++...+. +.. .++..++.+|++|.+.
T Consensus 114 -------------~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~---~~~--~~~~~~i~~ggdH~f~-- 173 (187)
T PF05728_consen 114 -------------ELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAV---AKY--RGCAQIIEEGGDHSFQ-- 173 (187)
T ss_pred -------------eechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHH---HHh--cCceEEEEeCCCCCCc--
Confidence 00000000000000111223579999999999999985543 333 3345566788899887
Q ss_pred CCchhHHHHHHHHHHHH
Q 020630 295 EPDENANLVLKDMREWI 311 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl 311 (323)
..++....|.+|+
T Consensus 174 ----~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 174 ----DFEEYLPQIIAFL 186 (187)
T ss_pred ----cHHHHHHHHHHhh
Confidence 2456777888886
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.8e-14 Score=108.88 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=80.5
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
++|+++|+.+++.. .|..+++.|...++.|+.++++|.+..... ..+++++++...+.|.....+ .++.|+
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~~-----gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQPE-----GPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTSS-----SSEEEE
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCCC-----CCeeeh
Confidence 47999999999877 899999999764589999999999832211 238999998888877776643 389999
Q ss_pred EechhHHHHHHHHhhc---CCCCeeEEEEccCccC
Q 020630 136 GESMGGAATMLMYFQS---EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~ 167 (323)
|||+||.+|+.+|.+- ... +..++++++...
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~-v~~l~liD~~~p 105 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEE-VSRLILIDSPPP 105 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-S-ESEEEEESCSST
T ss_pred ccCccHHHHHHHHHHHHHhhhc-cCceEEecCCCC
Confidence 9999999999999762 334 899999996543
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-13 Score=104.74 Aligned_cols=248 Identities=16% Similarity=0.177 Sum_probs=145.4
Q ss_pred EecCCC-cEEEEEecCCCC---CCceEEEEecCCCCC----cchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCC
Q 020630 35 FETPNG-KLFTQSFLPLDQ---KVKATVYMTHGYGSD----TGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~---~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
++.... .|..++|.|... ...|.||++||+|.- ....|..+...+++ .+..|+++|||-.-+..-+.
T Consensus 66 v~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa---- 141 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA---- 141 (336)
T ss_pred eEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc----
Confidence 333444 788899988652 357999999998742 12267777777754 48899999999544443222
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc------CCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
.+++..+.+.-+.+..-.+.+.+..+++|+|-|.||.+|..+|.+. +.+ +++.|++.|...............
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~k-i~g~ili~P~~~~~~~~~~e~~~~ 220 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPK-IKGQILIYPFFQGTDRTESEKQQN 220 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcc-eEEEEEEecccCCCCCCCHHHHHh
Confidence 3444444444444432223445678999999999999999888762 234 999999999988666554432111
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHh-hcCCccc--CCCCCchhHHHHHHhhHHHHhcCCcccc-cEEEEe
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI-ASNPRRY--TGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTVH 255 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~ 255 (323)
.... .. ........+. ...+... ...+...-... ..........+ |+|++.
T Consensus 221 ~~~~---------------~~----~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~------~~~~d~~~~~lp~tlv~~ 275 (336)
T KOG1515|consen 221 LNGS---------------PE----LARPKIDKWWRLLLPNGKTDLDHPFINPVGN------SLAKDLSGLGLPPTLVVV 275 (336)
T ss_pred hcCC---------------cc----hhHHHHHHHHHHhCCCCCCCcCCcccccccc------ccccCccccCCCceEEEE
Confidence 0000 00 0000000000 0001110 00000000000 00112223344 599999
Q ss_pred eCCCcccCchhHHHHHHHhcC--CCCcEEEecCCCccccccCCc-hhHHHHHHHHHHHHHHH
Q 020630 256 GTADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPD-ENANLVLKDMREWIDER 314 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~ 314 (323)
++.|.+. .....+++++.. -.+++..++++.|.+++-.+. ....++.+.+.+|+++.
T Consensus 276 ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 276 AGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred eCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 9999886 444555566532 345666789999999987775 67788999999998763
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.5e-15 Score=128.17 Aligned_cols=230 Identities=13% Similarity=0.112 Sum_probs=132.2
Q ss_pred HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhh--------------CCCCCCCEEEEEech
Q 020630 74 KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS--------------EPYRDLPAFLFGESM 139 (323)
Q Consensus 74 ~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~--------------~~~~~~~~~l~G~S~ 139 (323)
.+.++|+.+||.|+.+|.||.|.|.+.... -..+..+|..++|+++..+ .++...+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 355788999999999999999999886432 1245678999999999842 233467999999999
Q ss_pred hHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc----ccc-CCCcc-cccccccC-hhhHH
Q 020630 140 GGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT----WAA-MPDNK-MVGKAIKD-PEKLK 212 (323)
Q Consensus 140 Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~-~~~~~~~~-~~~~~ 212 (323)
||.+++.+|...|+. ++++|..++..+......... .......+... ... ..... ........ +....
T Consensus 348 ~G~~~~~aAa~~pp~-LkAIVp~a~is~~yd~yr~~G----~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~ 422 (767)
T PRK05371 348 LGTLPNAVATTGVEG-LETIIPEAAISSWYDYYRENG----LVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEK 422 (767)
T ss_pred HHHHHHHHHhhCCCc-ceEEEeeCCCCcHHHHhhcCC----ceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHH
Confidence 999999999988877 999999887654321110000 00000000000 000 00000 00000000 00000
Q ss_pred HhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCcc
Q 020630 213 VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHS 290 (323)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~ 290 (323)
.... ......... .....+.... .+...+.++++|+|+++|..|..+++..+.++++.+. +...++.+.+ .+|.
T Consensus 423 ~~~~-~~~~~~~~~-~~y~~fW~~r-n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~ 498 (767)
T PRK05371 423 LLAE-LTAAQDRKT-GDYNDFWDDR-NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHV 498 (767)
T ss_pred HHhh-hhhhhhhcC-CCccHHHHhC-CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCcc
Confidence 0000 000000000 0000011111 1234567899999999999999999988888888774 2345665555 5786
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 291 LIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
... ......+.+.+.+||++.+..
T Consensus 499 ~~~---~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 499 YPN---NWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CCC---chhHHHHHHHHHHHHHhcccc
Confidence 542 222456778888999888753
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-13 Score=91.64 Aligned_cols=187 Identities=14% Similarity=0.165 Sum_probs=121.8
Q ss_pred CCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCC-----CCCCCCCChHHHHhhHHHHHHHHHhhCC
Q 020630 53 KVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSD-----GIRCYLGDMEKVAASSLSFFKHVRHSEP 126 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-----~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 126 (323)
....+||+.||.|.+.+ .....++..|+.+|+.|..++++..-... .++....-..++...+.++-..+.
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~---- 87 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA---- 87 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc----
Confidence 34568899999987642 26778899999999999999987643222 222211122333344444433332
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccccccccc
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK 206 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
..++++-|+||||.++..++..-... |+++++++-++..+.....
T Consensus 88 --~gpLi~GGkSmGGR~aSmvade~~A~-i~~L~clgYPfhppGKPe~-------------------------------- 132 (213)
T COG3571 88 --EGPLIIGGKSMGGRVASMVADELQAP-IDGLVCLGYPFHPPGKPEQ-------------------------------- 132 (213)
T ss_pred --CCceeeccccccchHHHHHHHhhcCC-cceEEEecCccCCCCCccc--------------------------------
Confidence 44899999999999999998875555 9999988744332211100
Q ss_pred ChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC
Q 020630 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
. -.+.+..+++|++|.+|+.|.+-..+.+ +...-++..+++++++
T Consensus 133 --------------~------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~V---a~y~ls~~iev~wl~~ 177 (213)
T COG3571 133 --------------L------------------RTEHLTGLKTPTLITQGTRDEFGTRDEV---AGYALSDPIEVVWLED 177 (213)
T ss_pred --------------c------------------hhhhccCCCCCeEEeecccccccCHHHH---HhhhcCCceEEEEecc
Confidence 0 1356778899999999999998766554 2222236789999999
Q ss_pred CCccccccC------CchhHHHHHHHHHHHHHH
Q 020630 287 MYHSLIQGE------PDENANLVLKDMREWIDE 313 (323)
Q Consensus 287 ~gH~~~~~~------~~~~~~~~~~~i~~fl~~ 313 (323)
+.|.+--.. .++......+.|..|+.+
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999875111 123344456666667654
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.3e-14 Score=109.38 Aligned_cols=262 Identities=13% Similarity=0.136 Sum_probs=149.6
Q ss_pred EEecCCCCC-CceEEEEecCCCCCcchhh-----HHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHH-hhHHHH
Q 020630 45 QSFLPLDQK-VKATVYMTHGYGSDTGWMF-----QKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA-ASSLSF 117 (323)
Q Consensus 45 ~~~~~~~~~-~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~d~~~~ 117 (323)
..|.|..++ -+++++++|.+-.... .+ ..++..|.++|+.|+.+++++-..+... .++++++ +++...
T Consensus 96 iqy~p~~e~v~~~PlLiVpP~iNk~y-i~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~a 170 (445)
T COG3243 96 IQYKPLTEKVLKRPLLIVPPWINKFY-ILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEA 170 (445)
T ss_pred hccCCCCCccCCCceEeeccccCcee-EEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHH
Confidence 344454422 4678999999874321 22 4578889999999999999977666542 2677777 777777
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH-----HHHHHhhcc--ccccc
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK-----LHLFMYGLL--FGLAD 190 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~ 190 (323)
++.+....+ .+++.++|+|.||.++..+++.++.++|++++++.+..++........ ....+...+ ....+
T Consensus 171 id~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lp 248 (445)
T COG3243 171 IDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILP 248 (445)
T ss_pred HHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCC
Confidence 777766643 458999999999999999998887767999998887776554322111 011111000 00111
Q ss_pred ccc------cCCCc-----ccccccccC--hhhHHHh--hcCCcccCCCCCchhHHHHHHhhHHHH---------hcCCc
Q 020630 191 TWA------AMPDN-----KMVGKAIKD--PEKLKVI--ASNPRRYTGKPRVGTMREIARVCQYIQ---------DNFSK 246 (323)
Q Consensus 191 ~~~------~~~~~-----~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 246 (323)
.+. ..... .++...... +...++. ..+..............+++....... -.+.+
T Consensus 249 g~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~ 328 (445)
T COG3243 249 GWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGD 328 (445)
T ss_pred hHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhh
Confidence 100 00000 011111110 0011111 111111111001111112222111111 24678
Q ss_pred ccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCc-hhHHHHHH----HHHHHHHHHH
Q 020630 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD-ENANLVLK----DMREWIDERV 315 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~----~i~~fl~~~~ 315 (323)
|+||++.+.|++|.++|..........+++ +++++..+ +||...+-+|. ....+... ...+|+.+..
T Consensus 329 It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 329 ITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred cccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 999999999999999999999988888854 45665555 79988765533 22223333 6677776543
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=109.51 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=72.8
Q ss_pred EEEecCCCCC---cchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhh---CCCCCC
Q 020630 58 VYMTHGYGSD---TGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS---EPYRDL 130 (323)
Q Consensus 58 vv~~hG~~~~---~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~ 130 (323)
||++||.+.. .. ....++..+++ .|+.|+++|||-..+ ..+.+..+|+.++++++..+ .+.+..
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~p~--------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLAPE--------APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---TTT--------SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeecccccc--------ccccccccccccceeeecccccccccccc
Confidence 7999998854 23 33455666664 799999999994322 25778888999988888776 234467
Q ss_pred CEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccCC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVI 168 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~~ 168 (323)
+++|+|+|.||.+++.++....+ ..++++++++|..++
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999875322 128999999998765
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=123.97 Aligned_cols=117 Identities=17% Similarity=0.095 Sum_probs=89.9
Q ss_pred eEEecCCC-cEEEEEecCCC------CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCC-----
Q 020630 33 EYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI----- 100 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~----- 100 (323)
..+..++| ++.|...+... ....|+||++||++++.. .|..+++.|+++||+|+++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 45667778 77777644321 123579999999999887 889999999988999999999999999432
Q ss_pred -----CC---C---------CCChHHHHhhHHHHHHHHH------hh----CCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 101 -----RC---Y---------LGDMEKVAASSLSFFKHVR------HS----EPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 101 -----~~---~---------~~~~~~~~~d~~~~i~~l~------~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.. + ..++++.+.|+..+...++ .+ ...+..+++++||||||.++..++..
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 1267889999999999887 21 11336699999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-13 Score=101.20 Aligned_cols=123 Identities=14% Similarity=0.083 Sum_probs=85.6
Q ss_pred EEEEEecCCCC--CCceEEEEecCCCCCcchhhHH--HHHHHh-cCCcEEEEeccccCcCCCC-C---CCCCCChHHHHh
Q 020630 42 LFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQK--ICISYA-TWGYAVFAADLLGHGRSDG-I---RCYLGDMEKVAA 112 (323)
Q Consensus 42 l~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~--~~~~l~-~~g~~vi~~d~~G~G~s~~-~---~~~~~~~~~~~~ 112 (323)
|.|.+|.|++. .+.|.||++||.+.+.. .+.. -...|+ ++||.|+.++......... . ......-.....
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 56889998753 24699999999998765 3322 112344 4589999888542211110 0 000001112345
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
.|.++++++..++.+|..+|++.|+|.||.++..++..+|+. +.++.+.++..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~-faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL-FAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc-ceEEEeecccc
Confidence 677888888888889999999999999999999999999999 99988877654
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.7e-14 Score=98.21 Aligned_cols=212 Identities=14% Similarity=0.110 Sum_probs=133.7
Q ss_pred CCcEEEEEecCCCCCCceEEEEecCCCCC---cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 39 NGKLFTQSFLPLDQKVKATVYMTHGYGSD---TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 39 ~g~l~~~~~~~~~~~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
+|.-...+|++. ...+..||+||.-.. .. .--.++..+.++||+|.++++ +.++.. .++++...++.
T Consensus 53 ~g~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk-~clsiv~~a~~~gY~vasvgY---~l~~q~----htL~qt~~~~~ 122 (270)
T KOG4627|consen 53 GGRQLVDIWGST--NQAKLFIFIHGGYWQEGDRK-MCLSIVGPAVRRGYRVASVGY---NLCPQV----HTLEQTMTQFT 122 (270)
T ss_pred CCceEEEEecCC--CCccEEEEEecchhhcCchh-cccchhhhhhhcCeEEEEecc---CcCccc----ccHHHHHHHHH
Confidence 346677889985 458899999997532 22 223345556678999999875 344322 26777777777
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccC
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM 195 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (323)
..++++-...+ ....+.+-|||.|+.+|+.+..+..+.+|.++++.++.+.+....... ..
T Consensus 123 ~gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te----------~g-------- 183 (270)
T KOG4627|consen 123 HGVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTE----------SG-------- 183 (270)
T ss_pred HHHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCc----------cc--------
Confidence 77776655443 134577889999999999988775444499999999877533211100 00
Q ss_pred CCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc
Q 020630 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 275 (323)
..+.. ...... ........+..+++|+|++.|++|..--.+..+.+...+
T Consensus 184 ---~dlgL----------t~~~ae----------------~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~- 233 (270)
T KOG4627|consen 184 ---NDLGL----------TERNAE----------------SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL- 233 (270)
T ss_pred ---cccCc----------ccchhh----------------hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-
Confidence 00000 000000 000012345678999999999999876678888888887
Q ss_pred CCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 276 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
..+.+..+++.+|+-.+++..-....+...+++|
T Consensus 234 -~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 234 -RKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNI 267 (270)
T ss_pred -hhcceeecCCcchhhHHHHhccccchHHHHHHHH
Confidence 5689999999999998655432223333334333
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.2e-13 Score=115.27 Aligned_cols=228 Identities=15% Similarity=0.178 Sum_probs=145.8
Q ss_pred CC-cEEEEEecCCC---CCCceEEEEecCCCCCc----ch--hhHHHHHHHhcCCcEEEEeccccCcCCCCCC-----CC
Q 020630 39 NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----GW--MFQKICISYATWGYAVFAADLLGHGRSDGIR-----CY 103 (323)
Q Consensus 39 ~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~----~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~ 103 (323)
+| ...+....|++ .+.-|.+|.+||.+++. .+ .|... .....|+.|+.+|.||-|.....- ..
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~ 583 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRN 583 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhh
Confidence 88 88899888864 34568999999998632 11 23322 456779999999999987665221 10
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
.. ..-++|...+++.+....-+|..++.++|+|.||++++.++...++.-++..+.++|..++. ........+
T Consensus 584 lG--~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~ter---- 656 (755)
T KOG2100|consen 584 LG--DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTER---- 656 (755)
T ss_pred cC--CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHh----
Confidence 00 01234555555555555455678999999999999999999998855256669999987643 111000000
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccE-EEEeeCCCccc
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF-LTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~i~g~~D~~~ 262 (323)
+...+. .+ ....... .....+..++.|. |++||+.|..|
T Consensus 657 --------ymg~p~--------~~--~~~y~e~----------------------~~~~~~~~~~~~~~LliHGt~DdnV 696 (755)
T KOG2100|consen 657 --------YMGLPS--------EN--DKGYEES----------------------SVSSPANNIKTPKLLLIHGTEDDNV 696 (755)
T ss_pred --------hcCCCc--------cc--cchhhhc----------------------cccchhhhhccCCEEEEEcCCcCCc
Confidence 000000 00 0000000 0123334455555 99999999999
Q ss_pred CchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 263 CPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.+++..+.+.+. +-..++.++|+.+|.+.. .+....+...+..|+..++...
T Consensus 697 h~q~s~~~~~aL~~~gv~~~~~vypde~H~is~---~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 697 HFQQSAILIKALQNAGVPFRLLVYPDENHGISY---VEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred CHHHHHHHHHHHHHCCCceEEEEeCCCCccccc---ccchHHHHHHHHHHHHHHcCcc
Confidence 9999999998884 233688999999999983 2334668889999999665443
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.3e-13 Score=109.10 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=108.0
Q ss_pred CccceeEEecCCC-cEEEEEecCCCCCCceEEEEec--CCCCCc--chhhHHHHH---HHhcCCcEEEEeccccCcCCCC
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTH--GYGSDT--GWMFQKICI---SYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~h--G~~~~~--~~~~~~~~~---~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
+......++..|| +|+..+|.|.+.++.|+++..+ .+.-.. .+.-....+ .++.+||.|+..|.||.|.|.+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG 96 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCc
Confidence 5556788999999 9999999999878889999999 443321 101122333 5788999999999999999998
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
......+ +-++|-.+.|+++..+ +....+|.++|.|++|...+.+|+..|.. +++++...+..+.
T Consensus 97 ~~~~~~~--~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa-Lkai~p~~~~~D~ 161 (563)
T COG2936 97 VFDPESS--REAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPA-LKAIAPTEGLVDR 161 (563)
T ss_pred ccceecc--ccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCch-heeeccccccccc
Confidence 7655434 4567888888888875 44577999999999999999999998887 9999988877663
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.9e-12 Score=97.24 Aligned_cols=236 Identities=10% Similarity=-0.031 Sum_probs=131.9
Q ss_pred CCceEEEEecCCCCCcchhhHHH-HHHHhcCCcEEEEeccccCcCCCCCCCCC---CCh-------HHHHhhHHHHHHHH
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKI-CISYATWGYAVFAADLLGHGRSDGIRCYL---GDM-------EKVAASSLSFFKHV 121 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~-~~~l~~~g~~vi~~d~~G~G~s~~~~~~~---~~~-------~~~~~d~~~~i~~l 121 (323)
+.+|++|.+.|.|.+.-|.-..+ +..|.++|+..+.+..|-||...+..... .+. ...+.+...+++++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 45899999999997654333344 88888889999999999999876432211 122 23346777888898
Q ss_pred HhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC----chhHHHHHHhhcccccccccccCCC
Q 020630 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM----KPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
..+. ..++.+.|.||||.+|...|...|.. |..+-++++........ ...-.+..+...+.... ..
T Consensus 170 ~~~G---~~~~g~~G~SmGG~~A~laa~~~p~p-v~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~---~~--- 239 (348)
T PF09752_consen 170 EREG---YGPLGLTGISMGGHMAALAASNWPRP-VALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTV---YE--- 239 (348)
T ss_pred HhcC---CCceEEEEechhHhhHHhhhhcCCCc-eeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccc---hh---
Confidence 8883 55999999999999999999999986 76666665543211100 00001111111100000 00
Q ss_pred cccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccc-----ccEEEEeeCCCcccCchhHHHHHH
Q 020630 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT-----VPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
.................. . ..... .....+....-+....+.+.. -.+.++.+++|..||......+.+
T Consensus 240 -~~~~~~~~~~~~~~~~~~-~---~~~~~-~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 240 -EEISDIPAQNKSLPLDSM-E---ERRRD-REALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred -hhhcccccCcccccchhh-c---cccch-HHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 000000000000000000 0 00000 111111111111122233333 347899999999999999889999
Q ss_pred HhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.. |++++.++++ ||...+-.. .+.+.+.|.+=
T Consensus 314 ~W--PGsEvR~l~g-GHVsA~L~~---q~~fR~AI~Da 345 (348)
T PF09752_consen 314 IW--PGSEVRYLPG-GHVSAYLLH---QEAFRQAIYDA 345 (348)
T ss_pred hC--CCCeEEEecC-CcEEEeeec---hHHHHHHHHHH
Confidence 88 8899999997 998764222 23344555443
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=105.51 Aligned_cols=189 Identities=16% Similarity=0.221 Sum_probs=104.0
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCC------CC-----C-------C------CCCCC--
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRS------DG-----I-------R------CYLGD-- 106 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s------~~-----~-------~------~~~~~-- 106 (323)
..-|+|||-||++++.. .|..++..|+.+||-|+++|.|..-.. +. . . .....
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 34799999999999987 899999999999999999999943111 00 0 0 00000
Q ss_pred --------hHHHHhhHHHHHHHHHhh--------------------CCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeE
Q 020630 107 --------MEKVAASSLSFFKHVRHS--------------------EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTG 158 (323)
Q Consensus 107 --------~~~~~~d~~~~i~~l~~~--------------------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~ 158 (323)
++.-++++..+++.+..- ...+..++.++|||+||..++.++.... + +++
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~-r-~~~ 254 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT-R-FKA 254 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T-T---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc-C-cce
Confidence 111234555566555421 0112457899999999999999888763 3 999
Q ss_pred EEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH
Q 020630 159 LIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ 238 (323)
Q Consensus 159 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (323)
.|+++++...-.
T Consensus 255 ~I~LD~W~~Pl~-------------------------------------------------------------------- 266 (379)
T PF03403_consen 255 GILLDPWMFPLG-------------------------------------------------------------------- 266 (379)
T ss_dssp EEEES---TTS---------------------------------------------------------------------
T ss_pred EEEeCCcccCCC--------------------------------------------------------------------
Confidence 999998742100
Q ss_pred HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHh-cCCCCcEEEecCCCcccccc-------------------CCch
Q 020630 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA-SSADKSIKIYDGMYHSLIQG-------------------EPDE 298 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~-------------------~~~~ 298 (323)
.+....++.|+|+|+.+. +.-......+.+.. ..++..++.+.|+.|..+-+ +|..
T Consensus 267 --~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~ 342 (379)
T PF03403_consen 267 --DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPER 342 (379)
T ss_dssp --GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHH
T ss_pred --cccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHH
Confidence 011245678999998774 22233333333322 22466888999999976521 3445
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 020630 299 NANLVLKDMREWIDERVE 316 (323)
Q Consensus 299 ~~~~~~~~i~~fl~~~~~ 316 (323)
..+...+.+.+||+++++
T Consensus 343 a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 343 ALRINNRASLAFLRRHLG 360 (379)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 567778889999999975
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=95.45 Aligned_cols=120 Identities=16% Similarity=0.153 Sum_probs=90.1
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
.....++.|...+.-|+|+|+||+.-... .|..+...++.+||-|+++++-..- . + +-.+.+++..++++|
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~--~-p-----~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLF--P-P-----DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhccc--C-C-----CchHHHHHHHHHHHH
Confidence 45566777777677899999999997766 7899999999999999999987421 1 1 233345566666666
Q ss_pred HHhhCC--------CCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCC
Q 020630 121 VRHSEP--------YRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 121 l~~~~~--------~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~ 169 (323)
+...-. .+..++.++|||.||-.|..+|..+ .+..+.++|.++|..+..
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 654311 2356899999999999999999887 444589999999987644
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.3e-13 Score=99.33 Aligned_cols=179 Identities=10% Similarity=0.046 Sum_probs=89.9
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+-+..++++|+.+..++..+|.|+|.|.||-+|+.+|..+|+ |+++|.++|............... ...+.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~--i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~ 74 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ--ISAVVAISPSSVVFQGIGFYRDSS-------KPLPY 74 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS--EEEEEEES--SB--SSEEEETTE---------EE--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC--ccEEEEeCCceeEecchhcccCCC-------ccCCc
Confidence 456778888888877777899999999999999999999995 999999988765433211100000 00000
Q ss_pred cccCCCcccccccccCh-hhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh-HHH
Q 020630 192 WAAMPDNKMVGKAIKDP-EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKL 269 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 269 (323)
...... ......... ............ ......-.+.++++|+|+|.|++|.+.|... ++.
T Consensus 75 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------------~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~ 137 (213)
T PF08840_consen 75 LPFDIS--KFSWNEPGLLRSRYAFELADDK---------------AVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQ 137 (213)
T ss_dssp --B-GG--G-EE-TTS-EE-TT-B--TTTG---------------GGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHH
T ss_pred CCcChh--hceecCCcceehhhhhhccccc---------------ccccccccHHHcCCCEEEEEeCCCCccchHHHHHH
Confidence 000000 000000000 000000000000 0000011356789999999999999988654 445
Q ss_pred HHHHhcC---C-CCcEEEecCCCccccccC-C-----------------------chhHHHHHHHHHHHHHHHHh
Q 020630 270 LYEKASS---A-DKSIKIYDGMYHSLIQGE-P-----------------------DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 270 ~~~~~~~---~-~~~~~~~~~~gH~~~~~~-~-----------------------~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+++.. + +.++..|+++||.+..-- | ....+..++.+.+||++++.
T Consensus 138 i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 138 IEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5555521 2 468889999999875210 0 01456688899999999875
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-12 Score=87.55 Aligned_cols=176 Identities=13% Similarity=0.034 Sum_probs=114.4
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
+.+|++||++++....|+...+.- . -++-.+++. .-.....+++++.+.+.+... .++++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~--l-~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-------~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESA--L-PNARRVEQD--------DWEAPVLDDWIARLEKEVNAA-------EGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhh--C-ccchhcccC--------CCCCCCHHHHHHHHHHHHhcc-------CCCeEEE
Confidence 578999999988654666544321 1 112222222 111126777777777776665 2369999
Q ss_pred EechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhh
Q 020630 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
+||+|+.+++.++.+.... |.|+++++|+.--.+...... ..
T Consensus 65 AHSLGc~~v~h~~~~~~~~-V~GalLVAppd~~~~~~~~~~------------------------------------~~- 106 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQ-VAGALLVAPPDVSRPEIRPKH------------------------------------LM- 106 (181)
T ss_pred EecccHHHHHHHHHhhhhc-cceEEEecCCCccccccchhh------------------------------------cc-
Confidence 9999999999999986666 999999998753221110000 00
Q ss_pred cCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccC
Q 020630 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 295 (323)
.+. .....++.-|.+++...+|++++++.++.+++.+ +..++...++||... +.
T Consensus 107 ----tf~------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~-~s 160 (181)
T COG3545 107 ----TFD------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINA-ES 160 (181)
T ss_pred ----ccC------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccch-hh
Confidence 000 0112344679999999999999999999999998 367888888899876 32
Q ss_pred CchhHHHHHHHHHHHHHH
Q 020630 296 PDENANLVLKDMREWIDE 313 (323)
Q Consensus 296 ~~~~~~~~~~~i~~fl~~ 313 (323)
.-....+....+.+|+.+
T Consensus 161 G~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 161 GFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCcHHHHHHHHHHhhh
Confidence 233345566666666543
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.6e-12 Score=103.58 Aligned_cols=234 Identities=16% Similarity=0.129 Sum_probs=143.1
Q ss_pred ceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc----chhhHH--HHHHHhcCCcEEEEeccccCcCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQK--ICISYATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~----~~~~~~--~~~~l~~~g~~vi~~d~~G~G~s~~~ 100 (323)
+...+.+..| .++..+|.|.+ +++-|+|+++-|.++-. .|.+.. -...|+..||.|+.+|-||.-.....
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 4466777777 88888998865 34569999999987521 222211 13467889999999999986444311
Q ss_pred -------CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc
Q 020630 101 -------RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 101 -------~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~ 173 (323)
.-....+++.++.+.-+++..+ -++-.+|.+-|||+||++++....++|+- ++..|.-+|....... .
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~g---fidmdrV~vhGWSYGGYLSlm~L~~~P~I-frvAIAGapVT~W~~Y-D 768 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTG---FIDMDRVGVHGWSYGGYLSLMGLAQYPNI-FRVAIAGAPVTDWRLY-D 768 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcC---cccchheeEeccccccHHHHHHhhcCcce-eeEEeccCcceeeeee-c
Confidence 0011134555555444444432 14567999999999999999999999996 6666666665432100 0
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEE
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
.. .. .+.+.-+. .+...+. ..... ...+.+..-....|+
T Consensus 769 Tg--------------------YT----ERYMg~P~------~nE~gY~----agSV~-------~~VeklpdepnRLlL 807 (867)
T KOG2281|consen 769 TG--------------------YT----ERYMGYPD------NNEHGYG----AGSVA-------GHVEKLPDEPNRLLL 807 (867)
T ss_pred cc--------------------ch----hhhcCCCc------cchhccc----chhHH-------HHHhhCCCCCceEEE
Confidence 00 00 00000000 0000000 00000 012334444567899
Q ss_pred EeeCCCcccCchhHHHHHHHh--cCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 254 VHGTADGVTCPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+||--|.-|.......+...+ +++.-++.++|+.-|.+-- .+...-.-..+..|+++
T Consensus 808 vHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~---~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 808 VHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN---PESGIYYEARLLHFLQE 866 (867)
T ss_pred EecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC---CccchhHHHHHHHHHhh
Confidence 999999999988877777766 3455799999999998863 33345566778888875
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.5e-12 Score=95.25 Aligned_cols=208 Identities=19% Similarity=0.174 Sum_probs=121.7
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHh-cCCc--EE--EEeccccC----cCCC----CC------CCCC-CChHHHHhh
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYA-TWGY--AV--FAADLLGH----GRSD----GI------RCYL-GDMEKVAAS 113 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~g~--~v--i~~d~~G~----G~s~----~~------~~~~-~~~~~~~~d 113 (323)
...|.||+||++++.. .+..++..+. ++|. .+ +.++--|. |.=. .+ .... .+....++.
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 3568999999999876 8899999997 6554 23 33333332 2111 11 0111 267889999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC---C-CeeEEEEccCccCCCCCCchhHHHHHHhhcccccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP---N-TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~-~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+..++.+|..++. -.++.+|||||||..++.++..+.. . .+.++|.+++++..........
T Consensus 89 l~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~------------- 153 (255)
T PF06028_consen 89 LKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ------------- 153 (255)
T ss_dssp HHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T-------------
T ss_pred HHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc-------------
Confidence 9999999999987 6689999999999999999887422 1 2899999988765332211000
Q ss_pred cccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHH-HhcCCcccccEEEEeeC------CCccc
Q 020630 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGT------ADGVT 262 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~------~D~~~ 262 (323)
.. ..+... + .......+...... ...+. -++.+|-|.|. .|..|
T Consensus 154 -~~-----~~~~~~-------------------g---p~~~~~~y~~l~~~~~~~~p-~~i~VLnI~G~~~~g~~sDG~V 204 (255)
T PF06028_consen 154 -NQ-----NDLNKN-------------------G---PKSMTPMYQDLLKNRRKNFP-KNIQVLNIYGDLEDGSNSDGIV 204 (255)
T ss_dssp -TT-----T-CSTT-----------------------BSS--HHHHHHHHTHGGGST-TT-EEEEEEEESBTTCSBTSSS
T ss_pred -hh-----hhhccc-------------------C---CcccCHHHHHHHHHHHhhCC-CCeEEEEEecccCCCCCCCeEE
Confidence 00 000000 0 00011111111111 11121 26789999998 78999
Q ss_pred CchhHHHHHHHhcC--CCCcEEEecC--CCccccccCCchhHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASS--ADKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 263 ~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|...+..+...+.. ...+-.++.| +.|.-..++ .++.+.|.+||
T Consensus 205 ~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN-----~~V~~~I~~FL 252 (255)
T PF06028_consen 205 PNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHEN-----PQVDKLIIQFL 252 (255)
T ss_dssp BHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCC-----HHHHHHHHHHH
T ss_pred eHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCC-----HHHHHHHHHHh
Confidence 99988888777743 2334555654 679888443 34788888887
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.1e-12 Score=97.93 Aligned_cols=120 Identities=18% Similarity=0.156 Sum_probs=94.4
Q ss_pred ecCCC-cEEEEEecCCCC---CCceEEEEecCCCCCcchhhHHHHHHHhcC---------CcEEEEeccccCcCCCCCCC
Q 020630 36 ETPNG-KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQKICISYATW---------GYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---------g~~vi~~d~~G~G~s~~~~~ 102 (323)
+...| +||+....|+.. +.-.+++++|||+++-. .+-.+++.|.+. -|.||++.+||+|.|+.+..
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 45678 999998887642 22358999999999865 566677777654 27899999999999998766
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
...+..+.+.-+..++-.++-+ ++.|-|-.+|+.|+..+|..+|+. |.|+-+-.
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg~n------kffiqGgDwGSiI~snlasLyPen-V~GlHlnm 261 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLGYN------KFFIQGGDWGSIIGSNLASLYPEN-VLGLHLNM 261 (469)
T ss_pred CCccHHHHHHHHHHHHHHhCcc------eeEeecCchHHHHHHHHHhhcchh-hhHhhhcc
Confidence 5556666666677777666644 899999999999999999999998 88876543
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=100.14 Aligned_cols=228 Identities=19% Similarity=0.180 Sum_probs=132.9
Q ss_pred cEEEEEecCCCC------CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC--cCCCCCCCCC--C---Ch
Q 020630 41 KLFTQSFLPLDQ------KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH--GRSDGIRCYL--G---DM 107 (323)
Q Consensus 41 ~l~~~~~~~~~~------~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~--G~s~~~~~~~--~---~~ 107 (323)
++....+.+... ...|+|++-||.|+... .+..+++.+++.||.|.++|.+|- |..+...... + .+
T Consensus 51 ~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~ 129 (365)
T COG4188 51 ERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEW 129 (365)
T ss_pred ccccceeccCCCccccccCcCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhh
Confidence 677777776552 24699999999998866 888999999999999999999984 3333211110 1 23
Q ss_pred HHHHhhHHHHHHHHHhh---C----CCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccC---ccCCCCCCchhHH
Q 020630 108 EKVAASSLSFFKHVRHS---E----PYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP---LFVIPENMKPSKL 177 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~---~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~---~~~~~~~~~~~~~ 177 (323)
.+-..|+..+|+++... . ..+..+|.++|||+||+.++.++....+. ..+.-.|. ............
T Consensus 130 ~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~--~~~~~~C~~~~~~~~~~~~~~~~- 206 (365)
T COG4188 130 WERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDA--EALLQHCESASRICLDPPGLNGR- 206 (365)
T ss_pred hcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccH--HHHHHHhhhhhhcccCCCCcChh-
Confidence 34557788888877665 2 14567999999999999999988765442 11110000 000000000000
Q ss_pred HHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
.+. .....+. ......++++..+..+..++..-... -...+.+++.|++++.|.
T Consensus 207 --~l~----q~~av~~-----~~~~~~~rDpriravvA~~p~~~~~F---------------g~tgl~~v~~P~~~~a~s 260 (365)
T COG4188 207 --LLN----QCAAVWL-----PRQAYDLRDPRIRAVVAINPALGMIF---------------GTTGLVKVTDPVLLAAGS 260 (365)
T ss_pred --hhc----ccccccc-----chhhhccccccceeeeeccCCccccc---------------ccccceeeecceeeeccc
Confidence 000 0000000 01111112222111111111110000 135678899999999999
Q ss_pred CCcccCchh-HHHHHHHhcCCCCcEEEecCCCccccccCCch
Q 020630 258 ADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 258 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
.|.+.|... ....+..+.++...+..++++.|+.+++-..+
T Consensus 261 ~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 261 ADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred ccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 999877543 45556666555557889999999999766654
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.9e-12 Score=88.94 Aligned_cols=180 Identities=15% Similarity=0.143 Sum_probs=112.3
Q ss_pred CceEEEEecCCCCCcchhhH----HHHHHHhcCCcEEEEecccc----CcCCC--C------CC------C--------C
Q 020630 54 VKATVYMTHGYGSDTGWMFQ----KICISYATWGYAVFAADLLG----HGRSD--G------IR------C--------Y 103 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~----~~~~~l~~~g~~vi~~d~~G----~G~s~--~------~~------~--------~ 103 (323)
.++-|||+||+-.+.. .+. .+.+.+.+. +.++.+|-|- -+.+. . +. . .
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 3678999999987755 332 345555555 7777777662 01111 0 00 0 0
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh---------cCCCCeeEEEEccCccCCCCCCch
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ---------SEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---------~p~~~v~~~il~~~~~~~~~~~~~ 174 (323)
.......-+-+..+.+++..+.|. -.|+|+|.|+.++..++.. +|. ++-+|+++++........
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF----DGllGFSQGA~laa~l~~~~~~~~~~~~~P~--~kF~v~~SGf~~~~~~~~- 154 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF----DGLLGFSQGAALAALLAGLGQKGLPYVKQPP--FKFAVFISGFKFPSKKLD- 154 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC----ccccccchhHHHHHHhhcccccCCcccCCCC--eEEEEEEecCCCCcchhh-
Confidence 001111223355555666665432 2599999999999998872 233 677888886543210000
Q ss_pred hHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEE
Q 020630 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
-......+++|+|.|
T Consensus 155 -----------------------------------------------------------------~~~~~~~i~~PSLHi 169 (230)
T KOG2551|consen 155 -----------------------------------------------------------------ESAYKRPLSTPSLHI 169 (230)
T ss_pred -----------------------------------------------------------------hhhhccCCCCCeeEE
Confidence 012235779999999
Q ss_pred eeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.|+.|.++|.+.+..+++.+ ++..+..-+ +||...-.. ...+.|.+||.....
T Consensus 170 ~G~~D~iv~~~~s~~L~~~~--~~a~vl~Hp-ggH~VP~~~------~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 170 FGETDTIVPSERSEQLAESF--KDATVLEHP-GGHIVPNKA------KYKEKIADFIQSFLQ 222 (230)
T ss_pred ecccceeecchHHHHHHHhc--CCCeEEecC-CCccCCCch------HHHHHHHHHHHHHHH
Confidence 99999999999999999999 566555555 589998333 366667777766553
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.1e-12 Score=90.08 Aligned_cols=103 Identities=19% Similarity=0.184 Sum_probs=81.5
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
..+||+-|=|+=.. .-..+++.|+++|+.|+.+|-+-+=.+.+ +.++.+.|+..+|+....+.. ..+++|+
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w~--~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARWG--RKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHhC--CceEEEE
Confidence 46788888665544 55779999999999999999775554432 688999999999999988866 7799999
Q ss_pred EechhHHHHHHHHhhcCCC---CeeEEEEccCccC
Q 020630 136 GESMGGAATMLMYFQSEPN---TWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~ 167 (323)
|+|+|+-+.-....+.|.. +|+.++|++|...
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999998877777665531 2999999987653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.9e-12 Score=93.50 Aligned_cols=123 Identities=15% Similarity=0.070 Sum_probs=78.4
Q ss_pred cCCC-cEEEEEecCCC---CCCc-eEEEEecCCCCCcchhhHHHHH-------HHhcCCcEEEEecccc-CcCCCCCCCC
Q 020630 37 TPNG-KLFTQSFLPLD---QKVK-ATVYMTHGYGSDTGWMFQKICI-------SYATWGYAVFAADLLG-HGRSDGIRCY 103 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~---~~~~-~~vv~~hG~~~~~~~~~~~~~~-------~l~~~g~~vi~~d~~G-~G~s~~~~~~ 103 (323)
...| +|.|+.|.|.+ ++.- |.|||+||.|.........+.. ..-+.++-|+++.+-- +-.++.
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 3556 99999999964 2233 9999999998765422222211 1111223344443211 111111
Q ss_pred CCChHHHHhhHHHHH-HHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 104 LGDMEKVAASSLSFF-KHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i-~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
..+.......+++ +.+...+.+|..+++++|.|+||.-++.++.++|+. +.+.+++++..
T Consensus 244 --~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf-FAaa~~iaG~~ 304 (387)
T COG4099 244 --KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF-FAAAVPIAGGG 304 (387)
T ss_pred --ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh-hheeeeecCCC
Confidence 1122223333344 377777888899999999999999999999999999 99999998654
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.2e-12 Score=98.05 Aligned_cols=232 Identities=21% Similarity=0.226 Sum_probs=119.9
Q ss_pred HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCC---C-CCCCEEEEEechhHHHHHHHHh
Q 020630 74 KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEP---Y-RDLPAFLFGESMGGAATMLMYF 149 (323)
Q Consensus 74 ~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
.++..+.++||.|+++|+.|.|.. +. .-...+..+.+.++..+.-.+ . ...++.++|||.||..++..+.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~-----y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTP-----YL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCc-----cc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 345566678999999999999871 11 223334444444444443221 1 2458999999999999877664
Q ss_pred h----cCCCC--eeEEEEccCccCCCCCCchh---HHHHHHhhcccccccccccCCCcccccccccChh-----------
Q 020630 150 Q----SEPNT--WTGLIFSAPLFVIPENMKPS---KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE----------- 209 (323)
Q Consensus 150 ~----~p~~~--v~~~il~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 209 (323)
. -|+.+ +.+.++.+++.++....... .........+..+....+... ..+...+....
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~--~~~~~~l~~~g~~~~~~~~~~c 168 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELD--ELLDSYLTPEGRALLDDARTRC 168 (290)
T ss_pred HhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHH--HHHHHHhhHHHHHHHHHHHhhh
Confidence 4 36655 77888877765532211100 000000011111111111000 00111110000
Q ss_pred hHHHhhcCC-ccc--------CCCCCchhHHHHHHhhHHHHh---cCCcccccEEEEeeCCCcccCchhHHHHHHHhc--
Q 020630 210 KLKVIASNP-RRY--------TGKPRVGTMREIARVCQYIQD---NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS-- 275 (323)
Q Consensus 210 ~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 275 (323)
......... ... ...........+.....+..- .-...+.|+++.+|..|.++|......+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~ 248 (290)
T PF03583_consen 169 LADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAA 248 (290)
T ss_pred HHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHc
Confidence 000000000 000 000000000111122211111 112347999999999999999999998888873
Q ss_pred C-CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhcCC
Q 020630 276 S-ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCGP 320 (323)
Q Consensus 276 ~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~~ 320 (323)
+ .++++..+++.+|...... -.....+||..++.....
T Consensus 249 G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 249 GGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCCCC
Confidence 4 4678888889999876211 236677999999976544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.3e-11 Score=98.35 Aligned_cols=136 Identities=21% Similarity=0.228 Sum_probs=93.4
Q ss_pred ceeEEecCC---C-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHH------------------HHhcCCcEEE
Q 020630 31 GKEYFETPN---G-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI------------------SYATWGYAVF 87 (323)
Q Consensus 31 ~~~~~~~~~---g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~g~~vi 87 (323)
...++...+ + .++|+.+.... ....|+||+++|.++.+. .+..+.+ .+.+. .+++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccc-cCeE
Confidence 445555532 5 89999887543 345799999999987765 3322211 12222 6899
Q ss_pred Eeccc-cCcCCCCCCC-CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhhc---------CCCC
Q 020630 88 AADLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQS---------EPNT 155 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~---------p~~~ 155 (323)
.+|.| |+|.|..... ...+.++.++|+..+++.+-.+.+ ....+++|+|||+||..+..+|..- ...+
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~in 205 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYIN 205 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceee
Confidence 99975 8888875432 223568889999999997765544 2356899999999999988877652 1123
Q ss_pred eeEEEEccCccCC
Q 020630 156 WTGLIFSAPLFVI 168 (323)
Q Consensus 156 v~~~il~~~~~~~ 168 (323)
++++++.++..+.
T Consensus 206 LkGi~IGNg~~dp 218 (462)
T PTZ00472 206 LAGLAVGNGLTDP 218 (462)
T ss_pred eEEEEEeccccCh
Confidence 8999998887653
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.6e-12 Score=93.74 Aligned_cols=166 Identities=19% Similarity=0.205 Sum_probs=83.4
Q ss_pred CceEEEEecCCCCCcchhhH----HHHHHHhcCCcEEEEeccccC-----cCCC------------CC-CCC------CC
Q 020630 54 VKATVYMTHGYGSDTGWMFQ----KICISYATWGYAVFAADLLGH-----GRSD------------GI-RCY------LG 105 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~----~~~~~l~~~g~~vi~~d~~G~-----G~s~------------~~-~~~------~~ 105 (323)
.++.||++||++.+.. .++ .+.+.|.+.++.++.+|-|-- |-.. .+ ..+ ..
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 3789999999999876 454 455566553688888875421 1110 00 000 00
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc----C---CCCeeEEEEccCccCCCCCCchhHHH
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS----E---PNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p---~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
....+.+.+..+.+.+....+ =..|+|+|.||.+|..++... + ...++-+|+++++......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------
T ss_pred cccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------
Confidence 123333444444455554432 256999999999999888542 1 1127888888876531100
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCC
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
... .. .-.++++|+|.|+|++
T Consensus 151 ----------------------~~~------------------------------------~~-~~~~i~iPtlHv~G~~ 171 (212)
T PF03959_consen 151 ----------------------YQE------------------------------------LY-DEPKISIPTLHVIGEN 171 (212)
T ss_dssp ----------------------GTT------------------------------------TT---TT---EEEEEEETT
T ss_pred ----------------------hhh------------------------------------hh-ccccCCCCeEEEEeCC
Confidence 000 00 1245689999999999
Q ss_pred CcccCchhHHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
|.+++++.++.+.+.+... .+++..+ +||.+.
T Consensus 172 D~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP 203 (212)
T PF03959_consen 172 DPVVPPERSEALAEMFDPD-ARVIEHD-GGHHVP 203 (212)
T ss_dssp -SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS--
T ss_pred CCCcchHHHHHHHHhccCC-cEEEEEC-CCCcCc
Confidence 9999999999999998322 6666666 588886
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.1e-11 Score=111.82 Aligned_cols=101 Identities=12% Similarity=0.087 Sum_probs=83.4
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++++++||++++.. .|..+.+.|.. ++.|++++++|+|.+.. ..++++++++++.+.++.+.. ..++++
T Consensus 1068 ~~~l~~lh~~~g~~~-~~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~-----~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-QFSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP-----HGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchH-HHHHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC-----CCCEEE
Confidence 578999999998866 89999998876 49999999999986532 234899999999998887643 237999
Q ss_pred EEechhHHHHHHHHhh---cCCCCeeEEEEccCcc
Q 020630 135 FGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~---~p~~~v~~~il~~~~~ 166 (323)
+||||||.+|..+|.+ .+.+ +..++++++..
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~-v~~l~l~~~~~ 1171 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEE-VAFLGLLDTWP 1171 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCc-eeEEEEecCCC
Confidence 9999999999999986 4666 99999988643
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.35 E-value=4e-11 Score=89.79 Aligned_cols=110 Identities=13% Similarity=0.062 Sum_probs=73.3
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHh--------cCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhC
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYA--------TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSE 125 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~--------~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 125 (323)
.+.+||||||.+++.. .++.++..+. ...++++++|+......-. + ..+.+.++.+...++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g--~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--G--RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc--c--ccHHHHHHHHHHHHHHHHHhh
Confidence 3679999999988866 5666655542 1257899999876432211 1 134455555555555554433
Q ss_pred ---CCCCCCEEEEEechhHHHHHHHHhhcC---CCCeeEEEEccCccCCC
Q 020630 126 ---PYRDLPAFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 126 ---~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~il~~~~~~~~ 169 (323)
.....++++|||||||.+|..++...+ +. |+.+|.++++...+
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~-v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDS-VKTIITLGTPHRGS 126 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhcccccccc-EEEEEEEcCCCCCc
Confidence 123679999999999999988876643 34 99999988776544
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-10 Score=84.21 Aligned_cols=242 Identities=10% Similarity=0.036 Sum_probs=135.2
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcC---CcEEEEeccccCcCCC---C-----CCCCCCChHHHHhhHHHHHHHH
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATW---GYAVFAADLLGHGRSD---G-----IRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---g~~vi~~d~~G~G~s~---~-----~~~~~~~~~~~~~d~~~~i~~l 121 (323)
..++.+++++|.+|... +|..+++.|... .+.++.+-..||-.-+ . .....++++++++.=.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 56899999999999987 788888877643 1558888877775544 1 1123457888888888888776
Q ss_pred HhhCCCCCCCEEEEEechhHHHHHHHHhh-cCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccc
Q 020630 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (323)
.-+ +.+++++|||.|+++.+.++.. .+..+|.+++++-|..---......+........+....... ..
T Consensus 106 ~Pk----~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt------~y 175 (301)
T KOG3975|consen 106 VPK----DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLT------SY 175 (301)
T ss_pred CCC----CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhhee------ee
Confidence 655 6699999999999999998873 344448888887765421111111111111111000000000 00
Q ss_pred ccccccChhhHHHhhcCCcccCCCC-------------------CchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcc
Q 020630 201 VGKAIKDPEKLKVIASNPRRYTGKP-------------------RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
.--.......+.++..........+ ..-...++......-.+.+.+-.+-+.+.+|..|.+
T Consensus 176 i~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 176 IYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred eeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 0000000000111100000000000 000011111111112233444467889999999999
Q ss_pred cCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
+|.+....+.+.++..++++-+ ++..|.+..... +..++.+.+.
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~----q~ma~~v~d~ 299 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHA----QYMANAVFDM 299 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeeccc----HHHHHHHHHh
Confidence 9999999999999655666666 778999985554 4454544443
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.8e-10 Score=85.04 Aligned_cols=101 Identities=17% Similarity=0.243 Sum_probs=83.9
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
|+++++|+.++... .|..++..|... ..|+.++.||.+.-... ..+++++++...+.|..++.+ .+++|+
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~-----GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPE-----GPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCC-----CCEEEE
Confidence 57999999998865 899999999887 99999999999853222 237999999888888888765 389999
Q ss_pred EechhHHHHHHHHhh---cCCCCeeEEEEccCccC
Q 020630 136 GESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~---~p~~~v~~~il~~~~~~ 167 (323)
|||+||.+|..+|.+ ..+. |..++++++...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~-Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEE-VAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCe-EEEEEEeccCCC
Confidence 999999999999986 2334 999999998876
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-10 Score=81.85 Aligned_cols=182 Identities=17% Similarity=0.183 Sum_probs=118.2
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCC-----------------CCCCCCCChHHHHhhHHHH
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-----------------GIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 117 (323)
..+||++||.|.+.. .|..+.+.|.-....-|++.-|-.-.+. ........+...++.+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 568999999998876 6777777776666677777544221111 0000112344555666666
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCC
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
+++.... +++..++.+-|.||||.+++..+..++.. +.+++..++.........+ .+
T Consensus 82 i~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~~~-l~G~~~~s~~~p~~~~~~~----------------~~----- 138 (206)
T KOG2112|consen 82 IDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYPKA-LGGIFALSGFLPRASIGLP----------------GW----- 138 (206)
T ss_pred HHHHHHc-CCCccceeEcccCchHHHHHHHHhccccc-cceeeccccccccchhhcc----------------CC-----
Confidence 6655443 34456799999999999999999999776 7777776655431100000 00
Q ss_pred cccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--
Q 020630 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS-- 275 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 275 (323)
....+ ..|++..||+.|++||....+...+.+.
T Consensus 139 -------------------------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~ 173 (206)
T KOG2112|consen 139 -------------------------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSL 173 (206)
T ss_pred -------------------------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHc
Confidence 00001 6799999999999999877666555552
Q ss_pred CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 276 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
...+++..|++.+|... ++ =.+.+..|+.+
T Consensus 174 ~~~~~f~~y~g~~h~~~---~~-----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 174 GVRVTFKPYPGLGHSTS---PQ-----ELDDLKSWIKT 203 (206)
T ss_pred CCceeeeecCCcccccc---HH-----HHHHHHHHHHH
Confidence 23378999999999998 22 34667777765
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-09 Score=77.27 Aligned_cols=173 Identities=16% Similarity=0.111 Sum_probs=96.6
Q ss_pred EEEecCCCCCcchh-hH-HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 58 VYMTHGYGSDTGWM-FQ-KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 58 vv~~hG~~~~~~~~-~~-~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
||++||+.++.... .. .....+ ..+.+++ +++ .....+..+.+.+.+..+..... .+++.||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~--~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSD--DERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccC--CCCcEEE
Confidence 79999999876521 21 111122 1123333 221 01344444555555554322110 1378999
Q ss_pred EechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhh
Q 020630 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
|.|+||+.|..++.++.- ..|+++|....... +...+.. .
T Consensus 66 GSSLGGyyA~~La~~~g~----~aVLiNPAv~P~~~---------L~~~ig~--------~------------------- 105 (180)
T PRK04940 66 GVGLGGYWAERIGFLCGI----RQVIFNPNLFPEEN---------MEGKIDR--------P------------------- 105 (180)
T ss_pred EeChHHHHHHHHHHHHCC----CEEEECCCCChHHH---------HHHHhCC--------C-------------------
Confidence 999999999999999774 37888887753211 0000000 0
Q ss_pred cCCcccCCCCCchhHHHHHHhhHHHHhcCC-cccccEEEEeeCCCcccCchhHHHHHHHhcCCCC-cEEEecCCCccccc
Q 020630 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFS-KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADK-SIKIYDGMYHSLIQ 293 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 293 (323)
.. +. .+. ....+.++ +-.-..+++..+.|.+.+...+...+. ++ +..+.+|++|.+.
T Consensus 106 --~~-y~---------~~~---~~h~~eL~~~~p~r~~vllq~gDEvLDyr~a~~~y~-----~~y~~~v~~GGdH~f~- 164 (180)
T PRK04940 106 --EE-YA---------DIA---TKCVTNFREKNRDRCLVILSRNDEVLDSQRTAEELH-----PYYEIVWDEEQTHKFK- 164 (180)
T ss_pred --cc-hh---------hhh---HHHHHHhhhcCcccEEEEEeCCCcccCHHHHHHHhc-----cCceEEEECCCCCCCC-
Confidence 00 00 000 00011111 112345899999999998876665443 34 6888898888886
Q ss_pred cCCchhHHHHHHHHHHHHH
Q 020630 294 GEPDENANLVLKDMREWID 312 (323)
Q Consensus 294 ~~~~~~~~~~~~~i~~fl~ 312 (323)
..++....|.+|+.
T Consensus 165 -----~fe~~l~~I~~F~~ 178 (180)
T PRK04940 165 -----NISPHLQRIKAFKT 178 (180)
T ss_pred -----CHHHHHHHHHHHHh
Confidence 34668888999984
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4e-10 Score=84.37 Aligned_cols=126 Identities=17% Similarity=0.074 Sum_probs=89.7
Q ss_pred CCC-cEEEEEecCCCC-CCceEEEEecCCCCCcchhhHHHH--HHHh-cCCcEEEEeccc-------cCcCCCCCCCCCC
Q 020630 38 PNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKIC--ISYA-TWGYAVFAADLL-------GHGRSDGIRCYLG 105 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~--~~l~-~~g~~vi~~d~~-------G~G~s~~~~~~~~ 105 (323)
.+| +..|..|.|.+. .+.|.||++||.+++.. .+.... +.|+ ..||-|+.+|-- +.+.+..+....
T Consensus 42 ~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~- 119 (312)
T COG3509 42 VNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR- 119 (312)
T ss_pred cCCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc-
Confidence 345 889999998762 34589999999988754 222222 3333 359999998522 122221121111
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
.-.+-+..|.+++..+..+++++..+|++.|.|-||.++..++..+|+. +.++.++++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~-faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI-FAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc-ccceeeeeccc
Confidence 1223467788899999999999999999999999999999999999998 88888877655
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.5e-10 Score=84.35 Aligned_cols=110 Identities=16% Similarity=0.249 Sum_probs=72.8
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCC------C--CCCC------------------C--
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD------G--IRCY------------------L-- 104 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~------~--~~~~------------------~-- 104 (323)
..-|+|||-||+|++.. .|..++-.|+.+||.|.+++.|-+-.+. . .... .
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 45699999999999877 8999999999999999999998654332 0 0000 0
Q ss_pred CChHHHHhhHHH---HHHHHHhhC------------------CCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 105 GDMEKVAASSLS---FFKHVRHSE------------------PYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 105 ~~~~~~~~d~~~---~i~~l~~~~------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
.....-++.+.. +|+.+..-. ..+..++.++|||+||..++.....+.+ ++..|+.+
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~--FrcaI~lD 272 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD--FRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc--eeeeeeee
Confidence 001111222222 233322211 1234578999999999999888777666 88888877
Q ss_pred Cc
Q 020630 164 PL 165 (323)
Q Consensus 164 ~~ 165 (323)
.+
T Consensus 273 ~W 274 (399)
T KOG3847|consen 273 AW 274 (399)
T ss_pred ee
Confidence 65
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.7e-10 Score=90.30 Aligned_cols=187 Identities=18% Similarity=0.198 Sum_probs=122.2
Q ss_pred ceEEEEecCCC-C--Ccc--hhhHHHHHHHhcCCcEEEEecccc-CcCCCCCCCCCCChHHHHhhHHHHHHHH--HhhCC
Q 020630 55 KATVYMTHGYG-S--DTG--WMFQKICISYATWGYAVFAADLLG-HGRSDGIRCYLGDMEKVAASSLSFFKHV--RHSEP 126 (323)
Q Consensus 55 ~~~vv~~hG~~-~--~~~--~~~~~~~~~l~~~g~~vi~~d~~G-~G~s~~~~~~~~~~~~~~~d~~~~i~~l--~~~~~ 126 (323)
.|.+|++||.+ . .++ |.|+.......+. ..+..+|++. .|. .++...++.+..+.++. .....
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhcc
Confidence 58999999987 1 122 3444444333332 5567778763 221 25666666666666632 22223
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccccccccc
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK 206 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
....+++|+|.|||+.++.+....+.+..|+++|+++-......... ..
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------gi- 295 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------GI- 295 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------CC-
Confidence 34779999999999998888877665544899998875443222110 00
Q ss_pred ChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC
Q 020630 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
..+.+-.++.|+||+.|.+|..+++...+.+.+++.. ..+++++.+
T Consensus 296 ---------------------------------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI~~ 341 (784)
T KOG3253|consen 296 ---------------------------------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVIGG 341 (784)
T ss_pred ---------------------------------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEecC
Confidence 1234455688999999999999999999999999864 478999999
Q ss_pred CCccccccC-----CchhHHHHHHHHHHHHHHHH
Q 020630 287 MYHSLIQGE-----PDENANLVLKDMREWIDERV 315 (323)
Q Consensus 287 ~gH~~~~~~-----~~~~~~~~~~~i~~fl~~~~ 315 (323)
++|.+-... .......+...+.+||.+..
T Consensus 342 adhsmaipk~k~esegltqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 342 ADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFV 375 (784)
T ss_pred CCccccCCccccccccccHHHHHHHHHHHHHHHH
Confidence 999987533 12234445555555555443
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.1e-08 Score=79.00 Aligned_cols=208 Identities=13% Similarity=0.239 Sum_probs=128.1
Q ss_pred eeEEecCCCcEEEEEecCC-CCCCceEEEEecCCCCCcch--hhHHHHHHHhcCCcEEEEecccc--CcCCC--------
Q 020630 32 KEYFETPNGKLFTQSFLPL-DQKVKATVYMTHGYGSDTGW--MFQKICISYATWGYAVFAADLLG--HGRSD-------- 98 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~-~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~g~~vi~~d~~G--~G~s~-------- 98 (323)
...+.. +++=+...|.+. ..+....||++||.+.+..| ....+.+.|.+.||..+++.+|. .....
T Consensus 64 ~~~L~~-~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 64 VQWLQA-GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred cEEeec-CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 334444 443333444443 33567899999999988653 45678888999999999999887 11110
Q ss_pred --CC------CC--------------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCe
Q 020630 99 --GI------RC--------------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTW 156 (323)
Q Consensus 99 --~~------~~--------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v 156 (323)
.. .. .....+.+..-+.+++..+.... ..+++|+||+.|+..++.+....+...+
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~la~~~~~~~ 219 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARYLAEKPPPMP 219 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHhcCCCccc
Confidence 00 00 00012344456667777776663 3349999999999999999998776448
Q ss_pred eEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh
Q 020630 157 TGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236 (323)
Q Consensus 157 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++|++++.......
T Consensus 220 daLV~I~a~~p~~~~----------------------------------------------------------------- 234 (310)
T PF12048_consen 220 DALVLINAYWPQPDR----------------------------------------------------------------- 234 (310)
T ss_pred CeEEEEeCCCCcchh-----------------------------------------------------------------
Confidence 999999986432110
Q ss_pred hHHHHhcCCcccccEEEEeeCCCcccCchhHH---HHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK---LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
...+.+.+.+++.|||=|++.....+ ...+. ...++....+-+-+.+.+..|... ...+.+.+.|..||.+
T Consensus 235 n~~l~~~la~l~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-----~~~~~l~~rIrGWL~~ 308 (310)
T PF12048_consen 235 NPALAEQLAQLKIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS-----GWQEQLLRRIRGWLKR 308 (310)
T ss_pred hhhHHHHhhccCCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChh-----hHHHHHHHHHHHHHHh
Confidence 00134556778999999998873222 22111 112222223445566666555443 2234499999999987
Q ss_pred H
Q 020630 314 R 314 (323)
Q Consensus 314 ~ 314 (323)
+
T Consensus 309 ~ 309 (310)
T PF12048_consen 309 H 309 (310)
T ss_pred h
Confidence 5
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.1e-08 Score=81.16 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=75.1
Q ss_pred cEEEEEecCCC--CCCceEEEEecCCCCCcchhhHHHHHHHhcCCc----EEEEeccccCcCCCCCCCCCCChHHHHhhH
Q 020630 41 KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISYATWGY----AVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~----~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
+..+.+|.|.+ .++.|+|+++||-..........+.+.|...|. .++.+|..+.. ....... ....+.+.+
T Consensus 193 ~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~el~-~~~~f~~~l 269 (411)
T PRK10439 193 SRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQELP-CNADFWLAV 269 (411)
T ss_pred ceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cccccCC-chHHHHHHH
Confidence 77788888864 245699999999653322123344556655553 35677753211 1111111 122222222
Q ss_pred -HHHHHHHHhhCCC--CCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 115 -LSFFKHVRHSEPY--RDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 115 -~~~i~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
.+++-++..++++ +..+.+|+|+||||..|+.++.++|+. +.+++.+++..
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~-Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPER-FGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCccc-ccEEEEeccce
Confidence 3344444444332 355789999999999999999999999 99999999754
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.6e-11 Score=88.57 Aligned_cols=91 Identities=19% Similarity=0.178 Sum_probs=58.2
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCCcE---EEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWGYA---VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.||||+||.+++....|..+++.|.++||. |+++++-............ ...+.++.+.++|+.+....+ . +|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~-~~~~~~~~l~~fI~~Vl~~TG--a-kV 77 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAH-MSCESAKQLRAFIDAVLAYTG--A-KV 77 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHH-B-HHHHHHHHHHHHHHHHHHT-----E
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccc-cchhhHHHHHHHHHHHHHhhC--C-EE
Confidence 479999999986555899999999999999 7999985444322111000 122345788888888876654 5 99
Q ss_pred EEEEechhHHHHHHHHhh
Q 020630 133 FLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~ 150 (323)
-||||||||.++-.+...
T Consensus 78 DIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEETCHHHHHHHHHHH
T ss_pred EEEEcCCcCHHHHHHHHH
Confidence 999999999999888764
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-11 Score=92.80 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=72.3
Q ss_pred CCceEEEEecCCCCCc-ch-hhHHHHHH-Hhc--CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCC
Q 020630 53 KVKATVYMTHGYGSDT-GW-MFQKICIS-YAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~-~~-~~~~~~~~-l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 127 (323)
..+|++|++|||.++. .. ....+.+. |.. .+++||++|+...-...-. ........+.+.+..+|..|....++
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~-~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP-QAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH-HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc-chhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 4689999999998776 21 23444554 444 4899999999743221100 00012445567777778887755455
Q ss_pred CCCCEEEEEechhHHHHHHHHhhcCC--CCeeEEEEccCccCCCC
Q 020630 128 RDLPAFLFGESMGGAATMLMYFQSEP--NTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~v~~~il~~~~~~~~~ 170 (323)
+..+++|+|||+||++|-.++..... + |..|+.++|+.....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~k-i~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGK-IGRITGLDPAGPLFE 191 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-B-TTTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcce-eeEEEecCccccccc
Confidence 57799999999999999998888766 5 999999998876543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.8e-10 Score=85.35 Aligned_cols=129 Identities=14% Similarity=0.115 Sum_probs=87.2
Q ss_pred ceeEEecCCC-cEEEEEecCC---CCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPL---DQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~---~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~ 106 (323)
.+..+++.|| +|-....... .++....||++-|..+-.+ -.-+.. =++.||.|+.+++||++.|.+.+....+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE--vG~m~t-P~~lgYsvLGwNhPGFagSTG~P~p~n~ 291 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE--VGVMNT-PAQLGYSVLGWNHPGFAGSTGLPYPVNT 291 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE--eeeecC-hHHhCceeeccCCCCccccCCCCCcccc
Confidence 4566788888 5544333222 2244678899988765432 111122 2245899999999999999987654433
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
...+-.-+.-+|..++-+ .+.+++.|+|.||..+..+|..+|+ |+++|+-+++.+.
T Consensus 292 ~nA~DaVvQfAI~~Lgf~----~edIilygWSIGGF~~~waAs~YPd--VkavvLDAtFDDl 347 (517)
T KOG1553|consen 292 LNAADAVVQFAIQVLGFR----QEDIILYGWSIGGFPVAWAASNYPD--VKAVVLDATFDDL 347 (517)
T ss_pred hHHHHHHHHHHHHHcCCC----ccceEEEEeecCCchHHHHhhcCCC--ceEEEeecchhhh
Confidence 332222233345555544 6689999999999999999999999 9999999877654
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.2e-10 Score=91.09 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=75.3
Q ss_pred chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHH
Q 020630 69 GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMY 148 (323)
Q Consensus 69 ~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a 148 (323)
.+.|..+++.|.+.||.+ ..|++|+|.+..... ..++..+++.++++.+....+ ..+++|+||||||.++..++
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc---cHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHH
Confidence 348999999999999865 899999999875421 356677888888888766644 56999999999999999999
Q ss_pred hhcCCC---CeeEEEEccCccCCC
Q 020630 149 FQSEPN---TWTGLIFSAPLFVIP 169 (323)
Q Consensus 149 ~~~p~~---~v~~~il~~~~~~~~ 169 (323)
..+|+. .|+++|.++++....
T Consensus 181 ~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHCCHhHHhHhccEEEECCCCCCC
Confidence 887752 278889888765543
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-09 Score=81.06 Aligned_cols=116 Identities=18% Similarity=0.193 Sum_probs=83.3
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcch--h----hHHHHHHHhcCCcEEEEeccccCcCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW--M----FQKICISYATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~--~----~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~ 103 (323)
.+..+.. |+ .|-.....-++.++...||+.-|.++..+. . ...+.+.....|-+|+.++|||.|.|.+..
T Consensus 113 kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 113 KRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 3344444 66 666655553333668899999998865442 1 012223233347899999999999998765
Q ss_pred CCChHHHHhhHHHHHHHHHhhC-CCCCCCEEEEEechhHHHHHHHHhhc
Q 020630 104 LGDMEKVAASSLSFFKHVRHSE-PYRDLPAFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+.++++.|..+.++++..+. +++..++++.|||+||.++..++..+
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 57999999999999998643 34567899999999999998876664
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.5e-09 Score=88.79 Aligned_cols=248 Identities=12% Similarity=0.056 Sum_probs=151.7
Q ss_pred cccCCccceeEEecCCC-cEEEEEecCC-CCCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCC
Q 020630 24 TSQGVRNGKEYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~ 100 (323)
+..++..++...++.|| +|.|.+.+.. ...+.|++|+--|...-+ ...|......+.++|...+..+.||=|+-...
T Consensus 388 Da~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 388 DADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred CccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHH
Confidence 34456667888899999 9999998721 123567766554433221 22455555777788999999999998766421
Q ss_pred ---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHH
Q 020630 101 ---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 101 ---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~ 177 (323)
.....+-+...+|..++.+.|..+.-..++++.+.|-|-||.+.-.+..++|+. +.++|+--|..++-....
T Consensus 468 WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPel-fgA~v~evPllDMlRYh~---- 542 (648)
T COG1505 468 WHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPEL-FGAAVCEVPLLDMLRYHL---- 542 (648)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhh-hCceeeccchhhhhhhcc----
Confidence 111124456678888999988887655567899999999999999989999998 888888777665321100
Q ss_pred HHHHhhcccccccccccCCCccccccc--ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC--cccccEEE
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKA--IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS--KVTVPFLT 253 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~ 253 (323)
......+.... -.++.....+..... ...++ ..-.|+||
T Consensus 543 ----------------l~aG~sW~~EYG~Pd~P~d~~~l~~YSP---------------------y~nl~~g~kYP~~LI 585 (648)
T COG1505 543 ----------------LTAGSSWIAEYGNPDDPEDRAFLLAYSP---------------------YHNLKPGQKYPPTLI 585 (648)
T ss_pred ----------------cccchhhHhhcCCCCCHHHHHHHHhcCc---------------------hhcCCccccCCCeEE
Confidence 00000011000 011111112211110 11122 22358999
Q ss_pred EeeCCCcccCchhHHHHHHHhcCCCCcEEEe--cCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIY--DGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
-.+.+|.-|.|.+++.++..+...+.....+ .++||..--... +. ..-...+..||.+.+
T Consensus 586 TTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~-~~-A~~~a~~~afl~r~L 647 (648)
T COG1505 586 TTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTA-EI-ARELADLLAFLLRTL 647 (648)
T ss_pred EcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChH-HH-HHHHHHHHHHHHHhh
Confidence 9999999999999999999885333333333 468999873221 21 223344566776654
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.4e-08 Score=72.27 Aligned_cols=107 Identities=14% Similarity=0.064 Sum_probs=78.0
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCC-----cEEEEeccccC----cCCCCC----------CCCCCChHHHHhhHHH
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWG-----YAVFAADLLGH----GRSDGI----------RCYLGDMEKVAASSLS 116 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g-----~~vi~~d~~G~----G~s~~~----------~~~~~~~~~~~~d~~~ 116 (323)
-+.||+||.+++.. ....++..|...+ --++.+|--|- |.=+.. .....+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 47799999999987 7778888887653 13455665551 111111 1112356777899999
Q ss_pred HHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc------CCCCeeEEEEccCccC
Q 020630 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 117 ~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~il~~~~~~ 167 (323)
++.+|+.++. -.++.+|||||||.-...++..+ |. +..+|.+++.+.
T Consensus 125 ~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~--lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP--LNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcc--hhheEEeccccc
Confidence 9999999987 56899999999999999998874 44 889998887665
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=81.66 Aligned_cols=112 Identities=15% Similarity=0.176 Sum_probs=75.0
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCc--EEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGY--AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+.++||+||+..+........++.....++ .++.+.+|+.|.-..-.....+...-...+..+|+.+....+ ..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~--~~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPG--IK 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccC--Cc
Confidence 34789999999997743223333332222233 799999998876332111111344556778888888877643 66
Q ss_pred CEEEEEechhHHHHHHHHhh----cC-----CCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQ----SE-----PNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~----~p-----~~~v~~~il~~~~~~ 167 (323)
+|+|++||||+.+.+.+... .. .. +..+|+++|-.+
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~-~~~viL~ApDid 138 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKAR-FDNVILAAPDID 138 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhh-hheEEEECCCCC
Confidence 99999999999999887654 11 23 788999987664
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.6e-09 Score=84.80 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=101.7
Q ss_pred ccccCCccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCC-cchhhHHHHHHHhcCCcEEEEeccccCcCC
Q 020630 23 YTSQGVRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 23 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s 97 (323)
++......++..+.+.|| .+...+..... .+++|.+|..+|.-+- -...|..-...|.++|+.....|.||-|+-
T Consensus 434 ~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~ 513 (712)
T KOG2237|consen 434 FDASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEY 513 (712)
T ss_pred ccccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCccc
Confidence 334445567888999999 77766655432 2568888877775432 222444434456678999999999997655
Q ss_pred C---CCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 98 D---GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 98 ~---~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
. ...+....-....+|+.+.+++|..+.-....+..+.|.|.||.++..++.++|+. +.++|+-.|+.+
T Consensus 514 G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdL-F~avia~VpfmD 585 (712)
T KOG2237|consen 514 GEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDL-FGAVIAKVPFMD 585 (712)
T ss_pred ccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchH-hhhhhhcCccee
Confidence 4 22222112334457777778888777666677999999999999999999999999 999998887765
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.4e-08 Score=82.52 Aligned_cols=135 Identities=19% Similarity=0.242 Sum_probs=89.0
Q ss_pred eeEEecC--CC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHH-------------------HHhcCCcEEEE
Q 020630 32 KEYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI-------------------SYATWGYAVFA 88 (323)
Q Consensus 32 ~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~vi~ 88 (323)
..++... .+ +++|..+...+ .+.+|+||++.|.++.++ .+..+.+ .+.+. .+++-
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~ 90 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLF 90 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEE
T ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccc-cceEE
Confidence 3445444 45 89999887654 356899999999988776 4433322 12232 68999
Q ss_pred eccc-cCcCCCCCCC--CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh----c-----CCCC
Q 020630 89 ADLL-GHGRSDGIRC--YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ----S-----EPNT 155 (323)
Q Consensus 89 ~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~~~ 155 (323)
+|.| |.|.|..... ...+.++.++++..+|+..-.+.+ ....+++|.|-|+||..+-.+|.. . +...
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9966 8999975443 234788899999999988877665 345589999999999887666643 2 1334
Q ss_pred eeEEEEccCccCC
Q 020630 156 WTGLIFSAPLFVI 168 (323)
Q Consensus 156 v~~~il~~~~~~~ 168 (323)
++++++.++..+.
T Consensus 171 LkGi~IGng~~dp 183 (415)
T PF00450_consen 171 LKGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEEESE-SBH
T ss_pred cccceecCccccc
Confidence 8999999987653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1e-08 Score=72.75 Aligned_cols=124 Identities=19% Similarity=0.313 Sum_probs=78.0
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCcchhh--HHHHHHHhcCCcEEEEecc--ccC---cCCCCCC-----CC--
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMF--QKICISYATWGYAVFAADL--LGH---GRSDGIR-----CY-- 103 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~g~~vi~~d~--~G~---G~s~~~~-----~~-- 103 (323)
.+.+-+|.|+. +++-|++.++.|+.++..... .-+.+..+++|+.|+.+|- ||. |+++... ++
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYv 106 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYV 106 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEE
Confidence 77788888865 244689999999998754111 1233344567999999995 343 2222000 00
Q ss_pred CCC----------hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 104 LGD----------MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 104 ~~~----------~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
..+ .+-.++.+.+++.. ...+++..++.+.||||||.-|+..+.++|.+ .+++-..+|...
T Consensus 107 nAt~epw~~~yrMYdYv~kELp~~l~~--~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~k-ykSvSAFAPI~N 177 (283)
T KOG3101|consen 107 NATQEPWAKHYRMYDYVVKELPQLLNS--ANVPLDPLKVGIFGHSMGGHGALTIYLKNPSK-YKSVSAFAPICN 177 (283)
T ss_pred ecccchHhhhhhHHHHHHHHHHHHhcc--ccccccchhcceeccccCCCceEEEEEcCccc-ccceeccccccC
Confidence 001 11222333333332 23345677899999999999999999999988 888887777654
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.8e-08 Score=79.71 Aligned_cols=89 Identities=16% Similarity=0.173 Sum_probs=69.1
Q ss_pred HHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC
Q 020630 73 QKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 73 ~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
..+.-.|. .|+.|+.+.+. ..+....++++.......+++.+....+... +.+|+|.|.||+.++.+|+.+|
T Consensus 91 SevG~AL~-~GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 91 SEVGVALR-AGHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred cHHHHHHH-cCCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCc
Confidence 34555564 48999888765 2222234899998888999999988876333 8899999999999999999999
Q ss_pred CCCeeEEEEccCccCCCC
Q 020630 153 PNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 153 ~~~v~~~il~~~~~~~~~ 170 (323)
+. +.-+|+.+++.+...
T Consensus 163 d~-~gplvlaGaPlsywa 179 (581)
T PF11339_consen 163 DL-VGPLVLAGAPLSYWA 179 (581)
T ss_pred Cc-cCceeecCCCccccc
Confidence 98 888998887776554
|
Their function is unknown. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-08 Score=71.83 Aligned_cols=104 Identities=14% Similarity=0.175 Sum_probs=79.8
Q ss_pred ceEEEEecCCCCCc--chhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCC
Q 020630 55 KATVYMTHGYGSDT--GWMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYR 128 (323)
Q Consensus 55 ~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 128 (323)
+-.|||+.|++..- ...-..+..+|.+.+|.++-+-++ |+|.+ ++.+-++|+..+++++.....
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~f-- 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGF-- 105 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCc--
Confidence 46899999998652 224577888999999999988876 34433 677778999999998876543
Q ss_pred CCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCccCCC
Q 020630 129 DLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~~~~ 169 (323)
...|+|+|||.|+.=.+.+... .+.. |.+.|+.+|..+..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~-iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRK-IRAAILQAPVSDRE 147 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHH-HHHHHHhCccchhh
Confidence 4589999999999998888733 3444 88889999887643
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.1e-08 Score=80.02 Aligned_cols=144 Identities=13% Similarity=0.091 Sum_probs=95.6
Q ss_pred ccCCccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCC
Q 020630 25 SQGVRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
+.....++...+..|| +|.......++ .++.|++|..-|.-+.+ ...|....-.|.++||-......||=|+-..
T Consensus 414 p~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~ 493 (682)
T COG1770 414 PEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGR 493 (682)
T ss_pred hhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccCh
Confidence 3334445666777899 77766554432 35678888877754432 2244555556788999888888898776542
Q ss_pred C---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 100 I---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 100 ~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
. .+....-..-..|+.+..++|..+.-.....++++|-|.||++.-.++...|+. ++++|+-.|+.+.-
T Consensus 494 ~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~l-f~~iiA~VPFVDvl 565 (682)
T COG1770 494 AWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDL-FAGIIAQVPFVDVL 565 (682)
T ss_pred HHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhh-hhheeecCCccchh
Confidence 1 111111111224555555666555444466899999999999999999999999 99999999887743
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.2e-08 Score=73.34 Aligned_cols=96 Identities=13% Similarity=0.116 Sum_probs=67.2
Q ss_pred EecCCC--CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEe
Q 020630 60 MTHGYG--SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGE 137 (323)
Q Consensus 60 ~~hG~~--~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~ 137 (323)
++|+.+ ++.. .|..+...|.. ++.|++++++|++.+.... .+.+.+++.+...+..... ..+++++||
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~-----~~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAG-----GRPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcC-----CCCeEEEEE
Confidence 445543 3333 78888888876 4999999999998765332 2566666655554443221 347999999
Q ss_pred chhHHHHHHHHhh---cCCCCeeEEEEccCcc
Q 020630 138 SMGGAATMLMYFQ---SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 138 S~Gg~~a~~~a~~---~p~~~v~~~il~~~~~ 166 (323)
|+||.++..++.. .+.. +.+++++++..
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~-~~~l~~~~~~~ 102 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIP-PAAVVLLDTYP 102 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCC-CcEEEEEccCC
Confidence 9999999988876 3455 88898887644
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=79.17 Aligned_cols=128 Identities=13% Similarity=0.026 Sum_probs=76.0
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCc-chhhHHHHHHHhcCC----cEEEEeccccCcCCCC---------CC-C
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISYATWG----YAVFAADLLGHGRSDG---------IR-C 102 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g----~~vi~~d~~G~G~s~~---------~~-~ 102 (323)
...+.+|.|.+ .++-|+|+++||..... .+......+.+...| ..+++++..+.+.... .. .
T Consensus 7 ~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (251)
T PF00756_consen 7 DRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRAD 86 (251)
T ss_dssp EEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCT
T ss_pred eEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccc
Confidence 67778887776 35569999999972111 112223333333332 3456666555441110 00 0
Q ss_pred CCCChHHHHhhH-HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 103 YLGDMEKVAASS-LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 103 ~~~~~~~~~~d~-~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
.......+.+.+ .+++..+..++.+...+..|+|+||||..|+.++.++|+. +.+++.++|.....
T Consensus 87 ~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~-F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 87 DSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL-FGAVIAFSGALDPS 153 (251)
T ss_dssp STTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT-ESEEEEESEESETT
T ss_pred cCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc-cccccccCcccccc
Confidence 111122222222 2455555555543343489999999999999999999999 99999999876533
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.9e-07 Score=60.41 Aligned_cols=89 Identities=13% Similarity=0.123 Sum_probs=58.9
Q ss_pred EEEecCCCCCcchhhH-H-HHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 58 VYMTHGYGSDTGWMFQ-K-ICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 58 vv~~hG~~~~~~~~~~-~-~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
||++||+.++.. ... . +.+.+... . |-.+.+..... .+....++.+..+|...+.+ ...|+
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~-~-------~~i~y~~p~l~--h~p~~a~~ele~~i~~~~~~------~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDED-V-------RDIEYSTPHLP--HDPQQALKELEKAVQELGDE------SPLIV 64 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhcc-c-------cceeeecCCCC--CCHHHHHHHHHHHHHHcCCC------CceEE
Confidence 799999998755 332 2 22333322 2 22333332222 26888889999999888754 57999
Q ss_pred EechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
|-|+||+.|.+++.++. ++ .|+++|...
T Consensus 65 GssLGGY~At~l~~~~G---ir-av~~NPav~ 92 (191)
T COG3150 65 GSSLGGYYATWLGFLCG---IR-AVVFNPAVR 92 (191)
T ss_pred eecchHHHHHHHHHHhC---Ch-hhhcCCCcC
Confidence 99999999999999876 33 455566554
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.7e-07 Score=70.08 Aligned_cols=109 Identities=15% Similarity=0.127 Sum_probs=70.7
Q ss_pred CCceEEEEecCCCCCcc---h---hhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCC
Q 020630 53 KVKATVYMTHGYGSDTG---W---MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEP 126 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~---~---~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 126 (323)
++.|+||++||+|-.-. . ....+...|. ...++++|+.-...- ..+ ..+..+..++.+..+++....+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~--~~~--~~yPtQL~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD--EHG--HKYPTQLRQLVATYDYLVESEG 193 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc--cCC--CcCchHHHHHHHHHHHHHhccC
Confidence 34699999999884322 0 1122333343 368899998754311 111 1345556677777777774433
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCccCCC
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~~~~ 169 (323)
..+++|+|-|.||.+++.++... +..--+++|+++|+..+.
T Consensus 194 --~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 --NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred --CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 56899999999999999877541 111158999999998865
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.9e-06 Score=66.38 Aligned_cols=125 Identities=18% Similarity=0.207 Sum_probs=80.0
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEE--EEeccccCcCCCCCC----------------
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAV--FAADLLGHGRSDGIR---------------- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v--i~~d~~G~G~s~~~~---------------- 101 (323)
+|-|+..-....+.+..|+++.|+|++.. ..+..+.+.++++ |.| +.+++-|.|..+...
T Consensus 21 KLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~ 99 (403)
T PF11144_consen 21 KLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKS 99 (403)
T ss_pred eeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHH
Confidence 67788765555467889999999999864 2556777888876 655 556666665433100
Q ss_pred --------CCCC---ChHH-------------------------------------------HHhhHHHHHHHHHhhCCC
Q 020630 102 --------CYLG---DMEK-------------------------------------------VAASSLSFFKHVRHSEPY 127 (323)
Q Consensus 102 --------~~~~---~~~~-------------------------------------------~~~d~~~~i~~l~~~~~~ 127 (323)
.... .... .|-|+..++..+....+.
T Consensus 100 L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~ 179 (403)
T PF11144_consen 100 LEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPK 179 (403)
T ss_pred HHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhc
Confidence 0000 1111 122333444444443332
Q ss_pred CC--CCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 128 RD--LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 128 ~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.. .|++++|+|.||++|...|.-.|-. +++++=-+++..
T Consensus 180 ~~~~lp~I~~G~s~G~yla~l~~k~aP~~-~~~~iDns~~~~ 220 (403)
T PF11144_consen 180 NGGGLPKIYIGSSHGGYLAHLCAKIAPWL-FDGVIDNSSYAL 220 (403)
T ss_pred ccCCCcEEEEecCcHHHHHHHHHhhCccc-eeEEEecCcccc
Confidence 22 4999999999999999999999998 888887766543
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.77 E-value=9e-08 Score=74.17 Aligned_cols=112 Identities=14% Similarity=0.109 Sum_probs=77.2
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCC--cEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWG--YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+.++||+||+..+-...-...++...+.| ...+.+.+|..|.--+-.....+...-..+++.+|+.|..+.+ ..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--VK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--Cc
Confidence 3478999999998654323334444444444 4678889997775432221112444556889999999998876 66
Q ss_pred CEEEEEechhHHHHHHHHhh--------cCCCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQ--------SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~--------~p~~~v~~~il~~~~~~ 167 (323)
+++|++||||.+++++...+ .+.+ |+-+|+.+|-.+
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~k-i~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAK-IKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhh-hhheEeeCCCCC
Confidence 89999999999999987765 1234 788888887655
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.6e-08 Score=84.13 Aligned_cols=120 Identities=17% Similarity=0.130 Sum_probs=75.6
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCC---cchhhHHHHHHHhcC--CcEEEEeccc-c---CcCCCCCCCCCCChH
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSD---TGWMFQKICISYATW--GYAVFAADLL-G---HGRSDGIRCYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~~--g~~vi~~d~~-G---~G~s~~~~~~~~~~~ 108 (323)
-|+..+|.|.. .+..|+||++||.+.. .. .+ ....|+.. |+.|+++++| | +..+... .. ...
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~--~~n 151 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-EL--PGN 151 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CC--Ccc
Confidence 57777887764 2457999999997532 22 11 12334333 3999999999 3 3222211 10 111
Q ss_pred HHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 109 KVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
.-..|...++++++.. .+.+..+|.|+|+|.||..+..++... +.. ++++|+.++...
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~l-f~~~i~~sg~~~ 214 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGL-FHRAISQSGSAL 214 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHH-HHHHhhhcCCcc
Confidence 2235666666666554 345678999999999999998887762 344 888888876554
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.9e-07 Score=70.61 Aligned_cols=228 Identities=13% Similarity=0.073 Sum_probs=114.7
Q ss_pred EEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEe
Q 020630 58 VYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGE 137 (323)
Q Consensus 58 vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~ 137 (323)
+|++=||.+...-......+...+.|++++.+-.+-....... ......++.+.+.+....... ..++.+-.+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~---~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSAS---PPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccCC---CCCEEEEEE
Confidence 5666677655433566666667678999999876532222111 134444444444444333221 138999999
Q ss_pred chhHHHHHHHHhh-----c----CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccCh
Q 020630 138 SMGGAATMLMYFQ-----S----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 138 S~Gg~~a~~~a~~-----~----p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
|.||...+..... . .-.+++++|+-+++......... . .+...+......+. ..............
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~-~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 149 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSA-R---AFSAALPKSSPRWF-VPLWPLLQFLLRLS 149 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHH-H---HHHHHcCccchhhH-HHHHHHHHHHHHHH
Confidence 9988776655431 1 11128888887766543321111 0 11000100000000 00000000000000
Q ss_pred hhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecC
Q 020630 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDG 286 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 286 (323)
...... .... .......+... ........+|-++++++.|.+++.+..++..+... +-+++...+++
T Consensus 150 ~~~~~~-------~~~~--~~~~~~~~~~~--~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~ 218 (240)
T PF05705_consen 150 IISYFI-------FGYP--DVQEYYRRALN--DFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFED 218 (240)
T ss_pred HHHHHH-------hcCC--cHHHHHHHHHh--hhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 000000 0000 00001111111 11223446899999999999999998888776652 34478888899
Q ss_pred CCccccccCCchhHHHHHHHHHHHH
Q 020630 287 MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+.|..++ ...+++..+.+.+|+
T Consensus 219 S~HV~H~---r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 219 SPHVAHL---RKHPDRYWRAVDEFW 240 (240)
T ss_pred Cchhhhc---ccCHHHHHHHHHhhC
Confidence 9999996 344577778777763
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.1e-08 Score=72.31 Aligned_cols=94 Identities=11% Similarity=0.025 Sum_probs=51.8
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
++...|||+||+.++.. .|..+...+... .+.-..+...++.... ......++..++.+..-|............
T Consensus 2 ~~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccc
Confidence 34679999999999976 677666666541 1221122222221111 111124555555544333333322221134
Q ss_pred CEEEEEechhHHHHHHHHh
Q 020630 131 PAFLFGESMGGAATMLMYF 149 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~ 149 (323)
++.+|||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999876554
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.5e-06 Score=65.43 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=68.8
Q ss_pred ceEEEEecCCCC--CcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 55 KATVYMTHGYGS--DTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~hG~~~--~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
..+||+.||+|. +.. ....+.+.+.+ .|+.+.++. .|-+. .........+.++.+.+.+...... ..-
T Consensus 26 ~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L----~~G 96 (306)
T PLN02606 26 SVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL----SEG 96 (306)
T ss_pred CCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh----cCc
Confidence 458999999994 344 56677777742 366555554 23221 1222235566666665555553333 335
Q ss_pred EEEEEechhHHHHHHHHhhcCC-CCeeEEEEccCccC
Q 020630 132 AFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFV 167 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~il~~~~~~ 167 (323)
++++|+|.||.++-.++.+.|+ .+|+.+|.+++.-.
T Consensus 97 ~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999999999877 45999998876543
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.4e-07 Score=71.29 Aligned_cols=71 Identities=25% Similarity=0.375 Sum_probs=55.1
Q ss_pred CCccc-ccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 244 FSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 244 ~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.++. +|+|+++|.+|..+|...+..++........+...+++++|....... ...++..+.+.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP-PAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc-HHHHHHHHHHHHHHHHhc
Confidence 34444 799999999999999999999998885434678888889999884332 334578888999998764
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.1e-07 Score=75.19 Aligned_cols=126 Identities=17% Similarity=0.099 Sum_probs=78.1
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCC------CCCChHHHHh
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISYATW-GYAVFAADLLGHGRSDGIRC------YLGDMEKVAA 112 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~ 112 (323)
+.+|+....--.+++|++|++.|=+.-.. +....+...|+++ |-.+++++.|-+|.|.+... ...+.++..+
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALa 94 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALA 94 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHH
Confidence 55665543221233677777755442211 1222234445543 77899999999999974321 1237899999
Q ss_pred hHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 113 SSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 113 d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
|+..++++++.+.. ....|++++|-|+||.+|..+-.++|+. |.+.+..+++..
T Consensus 95 D~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~-~~ga~ASSapv~ 149 (434)
T PF05577_consen 95 DLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL-FDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT--SEEEEET--CC
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe-eEEEEeccceee
Confidence 99999999996642 2356999999999999999999999999 999998877654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.5e-07 Score=75.36 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=74.6
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcE---EEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYA---VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
.-+++++||++.+.. .|..+...+...|+. ++.+++++- .. ........+++..-+.+++...+ ..+
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~--~~~~~~~~~ql~~~V~~~l~~~g------a~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG-DG--TYSLAVRGEQLFAYVDEVLAKTG------AKK 128 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc-CC--CccccccHHHHHHHHHHHHhhcC------CCc
Confidence 458999999976666 777777777777887 888888865 11 11111134555555555555554 348
Q ss_pred EEEEEechhHHHHHHHHhhcC--CCCeeEEEEccCccCCC
Q 020630 132 AFLFGESMGGAATMLMYFQSE--PNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p--~~~v~~~il~~~~~~~~ 169 (323)
+.++||||||.++..++...+ .+ |+.++.++++-...
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~-V~~~~tl~tp~~Gt 167 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANR-VASVVTLGTPHHGT 167 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccce-EEEEEEeccCCCCc
Confidence 999999999999999888877 67 99999988765433
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.2e-05 Score=64.09 Aligned_cols=134 Identities=13% Similarity=0.146 Sum_probs=83.8
Q ss_pred eEEecC--CC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHH----------------HH-------hcCCcE
Q 020630 33 EYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI----------------SY-------ATWGYA 85 (323)
Q Consensus 33 ~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~----------------~l-------~~~g~~ 85 (323)
.++... .+ .++|..+.... ....|+|+++-|.++.++ .+..+.+ .| .+ -.+
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~an 119 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK-TAN 119 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhh-cCc
Confidence 344443 35 77877776543 245799999999987654 3322111 11 12 257
Q ss_pred EEEeccc-cCcCCCCCCC-CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh----c-----CC
Q 020630 86 VFAADLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ----S-----EP 153 (323)
Q Consensus 86 vi~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~ 153 (323)
++-+|.| |.|.|-.... ...+-++.++|+..+++..-...+ ....+++|.|.|+||..+-.+|.. . +.
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 8999954 8888854322 112334456788887777655544 335689999999999866666543 1 12
Q ss_pred CCeeEEEEccCccCC
Q 020630 154 NTWTGLIFSAPLFVI 168 (323)
Q Consensus 154 ~~v~~~il~~~~~~~ 168 (323)
-.++++++.++..+.
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 237899999887653
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.6e-06 Score=66.92 Aligned_cols=232 Identities=15% Similarity=0.173 Sum_probs=118.2
Q ss_pred CCceEEEEecCCCCCc--chhhHHHHHHHhcCCcEEEEeccc--------------cCcCCCCC---C---CC-CCChHH
Q 020630 53 KVKATVYMTHGYGSDT--GWMFQKICISYATWGYAVFAADLL--------------GHGRSDGI---R---CY-LGDMEK 109 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~vi~~d~~--------------G~G~s~~~---~---~~-~~~~~~ 109 (323)
++-|+++++||..++. -+....+-+.....|+.++++|-. |-+.|--. . .. .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 4568999999998773 223344555555668888886432 22222100 0 00 123333
Q ss_pred H-HhhHHHHHHHHHhhCCCCC--CCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc
Q 020630 110 V-AASSLSFFKHVRHSEPYRD--LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 110 ~-~~d~~~~i~~l~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
+ .+++.+.++..... +. .+..++||||||.-|+.+|.++|++ ++.+...++........... .
T Consensus 132 fl~~ELP~~~~~~f~~---~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-f~~~sS~Sg~~~~s~~~~~~------~---- 197 (316)
T COG0627 132 FLTQELPALWEAAFPA---DGTGDGRAIAGHSMGGYGALKLALKHPDR-FKSASSFSGILSPSSPWGPT------L---- 197 (316)
T ss_pred HHHhhhhHHHHHhcCc---ccccCCceeEEEeccchhhhhhhhhCcch-hceecccccccccccccccc------c----
Confidence 3 34555344332221 12 2678999999999999999999998 99999998887655332221 0
Q ss_pred ccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh-hHHHHhcCCcccccEEEEeeCCCcccC--
Q 020630 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-CQYIQDNFSKVTVPFLTVHGTADGVTC-- 263 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~~~-- 263 (323)
.+...+.......++..... ......++ ......+... ....... .....++++-+|..|.+..
T Consensus 198 ~~~~~~g~~~~~~~~G~~~~----~~w~~~D~--------~~~~~~l~~~~~~~~~~~-~~~~~~~~~d~g~ad~~~~~~ 264 (316)
T COG0627 198 AMGDPWGGKAFNAMLGPDSD----PAWQENDP--------LSLIEKLVANANTRIWVY-GGSPPELLIDNGPADFFLAAN 264 (316)
T ss_pred cccccccCccHHHhcCCCcc----ccccccCc--------hhHHHHhhhcccccceec-ccCCCccccccccchhhhhhc
Confidence 00000000000000000000 00000000 0000000000 0000011 1134567777888888764
Q ss_pred chhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 264 PTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 264 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
....+.+.+++. +-+..+...++.+|... ++....+....|+...+..
T Consensus 265 ~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~------~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 265 NLSTRAFAEALRAAGIPNGVRDQPGGDHSWY------FWASQLADHLPWLAGALGL 314 (316)
T ss_pred ccCHHHHHHHHHhcCCCceeeeCCCCCcCHH------HHHHHHHHHHHHHHHHhcc
Confidence 333566666663 22345666677788776 4666778888888877643
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.9e-06 Score=63.70 Aligned_cols=251 Identities=12% Similarity=-0.011 Sum_probs=122.7
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhH-HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhH----H
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS----L 115 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~----~ 115 (323)
+-++..+.|. +..+.-|++-|-|.+.. .-+ .+...+.++|...+.+.-|-+|....+......++.. .|+ .
T Consensus 101 ~A~~~~liPQ--K~~~KOG~~a~tgdh~y-~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~v-tDlf~mG~ 176 (371)
T KOG1551|consen 101 TARVAWLIPQ--KMADLCLSWALTGDHVY-TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYV-TDLFKMGR 176 (371)
T ss_pred ceeeeeeccc--CcCCeeEEEeecCCcee-EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHH-HHHHHhhH
Confidence 4455556664 34566666666554432 212 3555666778899999999999876543322122222 221 1
Q ss_pred HHHHHHHh----hCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 116 SFFKHVRH----SEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 116 ~~i~~l~~----~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+.|+.... .....-.++.++|-||||.+|..+...++.. |.-+=++++.......... .+......+.++...
T Consensus 177 A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P-va~~p~l~~~~asvs~teg--~l~~~~s~~~~~~~~ 253 (371)
T KOG1551|consen 177 ATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP-VATAPCLNSSKASVSATEG--LLLQDTSKMKRFNQT 253 (371)
T ss_pred HHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC-ccccccccccccchhhhhh--hhhhhhHHHHhhccC
Confidence 22222221 1111245899999999999999988877665 5544444432211110000 000000001111000
Q ss_pred cccCCCcccccccccCh--hhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc-----EEEEeeCCCcccCc
Q 020630 192 WAAMPDNKMVGKAIKDP--EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-----FLTVHGTADGVTCP 264 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~ 264 (323)
. .......+.+ ........ ..+ ........+.+..-+--..+....+| +.++.+++|..+|.
T Consensus 254 ----t--~~~~~~~r~p~Q~~~~~~~~-~sr----n~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr 322 (371)
T KOG1551|consen 254 ----T--NKSGYTSRNPAQSYHLLSKE-QSR----NSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPR 322 (371)
T ss_pred ----c--chhhhhhhCchhhHHHHHHH-hhh----cchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccc
Confidence 0 0000000000 00000000 000 00111111111111101112222333 57788999999999
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.....+.+.. |++++..++ +||...+--. .+.+.+.|.+-|++..
T Consensus 323 ~gv~~lQ~~W--Pg~eVr~~e-gGHVsayl~k---~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 323 TGVRSLQEIW--PGCEVRYLE-GGHVSAYLFK---QDLFRRAIVDGLDRLD 367 (371)
T ss_pred cCcHHHHHhC--CCCEEEEee-cCceeeeehh---chHHHHHHHHHHHhhh
Confidence 9899999888 889999999 5897754221 2446666777666544
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.5e-05 Score=62.32 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=82.1
Q ss_pred eeEEecC--CC-cEEEEEecCCC-CCCceEEEEecCCCCCcch--hhHHHHH-------------HH-------hcCCcE
Q 020630 32 KEYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW--MFQKICI-------------SY-------ATWGYA 85 (323)
Q Consensus 32 ~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~--~~~~~~~-------------~l-------~~~g~~ 85 (323)
..++... .+ .++|+.+.... ....|+||++-|.++.++. .+....+ .| .+ -.+
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~an 117 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK-MAN 117 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh-cCc
Confidence 4445443 35 78888776543 2457999999999876541 1111111 11 12 257
Q ss_pred EEEeccc-cCcCCCCCCCCCC-ChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh----c-----CC
Q 020630 86 VFAADLL-GHGRSDGIRCYLG-DMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ----S-----EP 153 (323)
Q Consensus 86 vi~~d~~-G~G~s~~~~~~~~-~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~ 153 (323)
++-+|.| |.|.|........ +-.+.++++..++...-...+ ....+++|.|.|+||..+-.+|.. . +.
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 9999954 8998864332111 112334677766666544443 235689999999999876666543 1 22
Q ss_pred CCeeEEEEccCccCC
Q 020630 154 NTWTGLIFSAPLFVI 168 (323)
Q Consensus 154 ~~v~~~il~~~~~~~ 168 (323)
..++|+++.+|....
T Consensus 198 inLkGi~iGNg~t~~ 212 (433)
T PLN03016 198 INLQGYMLGNPVTYM 212 (433)
T ss_pred ccceeeEecCCCcCc
Confidence 248899999886543
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.9e-06 Score=63.51 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=69.5
Q ss_pred ceEEEEecCCCCCcc-hhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 55 KATVYMTHGYGSDTG-WMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
..++|+.||+|.+.. .....+.+.+.+. |..+.++.. |.+ ....+.....+.++.+.+.+...... ..-+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l----~~G~ 96 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL----SQGY 96 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh----hCcE
Confidence 457899999997632 1445555555332 666666653 333 22333345666666666666654433 2359
Q ss_pred EEEEechhHHHHHHHHhhcCC-CCeeEEEEccCcc
Q 020630 133 FLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~-~~v~~~il~~~~~ 166 (323)
+++|+|.||.++-.++.+.++ .+|+.+|.+++.-
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999999887 4599999887653
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.1e-05 Score=62.03 Aligned_cols=139 Identities=16% Similarity=0.117 Sum_probs=88.4
Q ss_pred ccceeEEecC--CC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHH---HHH--------Hhc------CCcEEE
Q 020630 29 RNGKEYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKI---CIS--------YAT------WGYAVF 87 (323)
Q Consensus 29 ~~~~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~---~~~--------l~~------~g~~vi 87 (323)
.....++... .+ .|+|+.+.... +..+|.||++.|+++.++ ....+ .+. |.. +--+++
T Consensus 43 ~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS-l~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiL 121 (454)
T KOG1282|consen 43 KQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS-LGGLFEENGPFRVKYNGKTLYLNPYSWNKEANIL 121 (454)
T ss_pred ccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc-hhhhhhhcCCeEEcCCCCcceeCCccccccccEE
Confidence 3344555544 46 89999887654 345899999999987654 22111 111 110 114688
Q ss_pred Eeccc-cCcCCCCCCC--CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh----c-----CCC
Q 020630 88 AADLL-GHGRSDGIRC--YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ----S-----EPN 154 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~~ 154 (323)
-+|.| |.|.|-.... ...+-+..++|+..++...-.+.| ....+++|.|-|++|...-.+|.. + |..
T Consensus 122 fLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~i 201 (454)
T KOG1282|consen 122 FLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNI 201 (454)
T ss_pred EEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcc
Confidence 88988 7777753322 223456667777776665555544 557799999999999776666643 2 223
Q ss_pred CeeEEEEccCccCC
Q 020630 155 TWTGLIFSAPLFVI 168 (323)
Q Consensus 155 ~v~~~il~~~~~~~ 168 (323)
+++|+++-+|..+.
T Consensus 202 NLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 202 NLKGYAIGNGLTDP 215 (454)
T ss_pred cceEEEecCcccCc
Confidence 48999998887653
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.9e-07 Score=68.24 Aligned_cols=107 Identities=15% Similarity=0.052 Sum_probs=55.5
Q ss_pred ceEEEEecCCCCCcc--hhhHHHHHHHhc--CCcEEEEeccccCcCC-CCCCCCCCChHHHHhhHHHHHHHHHhhCCCCC
Q 020630 55 KATVYMTHGYGSDTG--WMFQKICISYAT--WGYAVFAADLLGHGRS-DGIRCYLGDMEKVAASSLSFFKHVRHSEPYRD 129 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~--~g~~vi~~d~~G~G~s-~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 129 (323)
..+||+.||+|.+.. ..+..+.+.+.+ -|--|.+++.- -+.+ +.......+..+.++.+.+.+.....- .
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L----~ 79 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPEL----A 79 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG----T
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhh----h
Confidence 568999999996531 134444433332 26778888763 2211 111111123455555555555544333 2
Q ss_pred CCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 130 LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
.-++++|+|.||.++-.++.+.++..|+.+|.+++.-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 3699999999999999999998776699999887643
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.5e-06 Score=61.70 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=49.9
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcE-EEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYA-VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
+..|||..|+|++.. .+..+. + ..++. ++++|||..- ++ .| + .. .+++.
T Consensus 11 ~~LilfF~GWg~d~~-~f~hL~--~-~~~~D~l~~yDYr~l~-----------~d---~~-------~-~~----y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPS-PFSHLI--L-PENYDVLICYDYRDLD-----------FD---FD-------L-SG----YREIY 60 (213)
T ss_pred CeEEEEEecCCCChH-Hhhhcc--C-CCCccEEEEecCcccc-----------cc---cc-------c-cc----CceEE
Confidence 579999999998866 444432 1 23455 4677887221 11 01 1 11 33899
Q ss_pred EEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
|||+|||-.+|..+....| ++..|.+++..
T Consensus 61 lvAWSmGVw~A~~~l~~~~---~~~aiAINGT~ 90 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP---FKRAIAINGTP 90 (213)
T ss_pred EEEEeHHHHHHHHHhccCC---cceeEEEECCC
Confidence 9999999999988766543 55666665543
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1e-05 Score=60.16 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=70.2
Q ss_pred eEEEEecCCCCCcc-hhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 56 ATVYMTHGYGSDTG-WMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 56 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
.++|++||++.... .....+.+.+.+. |..|++.|. |-| . .........++++.+.+.+...... .+-++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~-~~s~l~pl~~Qv~~~ce~v~~m~~l----sqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--I-KDSSLMPLWEQVDVACEKVKQMPEL----SQGYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--c-chhhhccHHHHHHHHHHHHhcchhc----cCceE
Confidence 57899999997643 2366677766655 888999985 344 1 1111123555555555555544333 44689
Q ss_pred EEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
++|.|.||.++-.++...++.+|+..|.++++-
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999999887766699999877543
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.8e-06 Score=70.14 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=76.2
Q ss_pred cEEEEEecCC-CCCCceEEEEecCCCC---C-cchhhHHHHHHHhcCC-cEEEEecccc--CcCCCCC-----CCCCCCh
Q 020630 41 KLFTQSFLPL-DQKVKATVYMTHGYGS---D-TGWMFQKICISYATWG-YAVFAADLLG--HGRSDGI-----RCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~-~~~~~~~vv~~hG~~~---~-~~~~~~~~~~~l~~~g-~~vi~~d~~G--~G~s~~~-----~~~~~~~ 107 (323)
-|+..+|.|. ..++.|++|+|||.+- + +...|+ ...|+++| +-|+++++|- .|.-... .....+
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n- 155 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN- 155 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhcccccccccc-
Confidence 4777888888 5566799999999753 2 221233 34577777 9999999982 2222111 111001
Q ss_pred HHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccC
Q 020630 108 EKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFV 167 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~ 167 (323)
--..|...+|++++.+ .+.|.+.|.|+|+|.||+.++.+.+. |. . ++++|+.++...
T Consensus 156 -~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGL-F~rAi~~Sg~~~ 218 (491)
T COG2272 156 -LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGL-FHRAIALSGAAS 218 (491)
T ss_pred -ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHH-HHHHHHhCCCCC
Confidence 1224555555555443 33457799999999999998887765 33 3 666777777664
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.2e-06 Score=74.35 Aligned_cols=124 Identities=15% Similarity=0.064 Sum_probs=70.4
Q ss_pred cEEEEEecCCCCC---CceEEEEecCCCCCcch---hhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHH
Q 020630 41 KLFTQSFLPLDQK---VKATVYMTHGYGSDTGW---MFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 41 ~l~~~~~~~~~~~---~~~~vv~~hG~~~~~~~---~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~ 110 (323)
-|+..+|.|.... ..|++|+|||.+..... ....-...+++++.-||+++|| |+-.+...... .-.--
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 4777888887643 35999999997643210 1122233455678999999999 33222211100 01122
Q ss_pred HhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 111 AASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 111 ~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
..|...+|++++.. .+.|+.+|.|+|+|.||..+..++... ... ++++|+.++...
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L-F~raI~~SGs~~ 246 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGL-FHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTS-BSEEEEES--TT
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccc-cccccccccccc
Confidence 35666666666654 234577999999999999887766552 345 999999887544
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.8e-05 Score=63.36 Aligned_cols=155 Identities=15% Similarity=0.190 Sum_probs=93.7
Q ss_pred CCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc-CccCCCCCCchhHHHHHHhhcccccccccccCCCccccccc
Q 020630 126 PYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA-PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 126 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
++.-.+++|.|.|==|..++..|+. ..+ |++++-+. ...++.. .+......+...|.......
T Consensus 168 ~~~i~~FvV~GaSKRGWTtWltaa~-D~R-V~aivP~Vid~LN~~~---------~l~h~y~~yG~~ws~a~~dY----- 231 (367)
T PF10142_consen 168 GVNIEKFVVTGASKRGWTTWLTAAV-DPR-VKAIVPIVIDVLNMKA---------NLEHQYRSYGGNWSFAFQDY----- 231 (367)
T ss_pred CCCccEEEEeCCchHhHHHHHhhcc-Ccc-eeEEeeEEEccCCcHH---------HHHHHHHHhCCCCccchhhh-----
Confidence 3446699999999999999999995 344 88888543 2222111 11111111111222111110
Q ss_pred ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEe
Q 020630 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
........... ..+..+....+ ......++++|.++|.|..|.+..+.....+.+.+++ ...+..+
T Consensus 232 ---------~~~gi~~~l~t---p~f~~L~~ivD-P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~v 297 (367)
T PF10142_consen 232 ---------YNEGITQQLDT---PEFDKLMQIVD-PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYV 297 (367)
T ss_pred ---------hHhCchhhcCC---HHHHHHHHhcC-HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeC
Confidence 00000000011 11111111111 1223356699999999999999999999999999976 4689999
Q ss_pred cCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 285 DGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|+++|.... ..+.+.+..|+......
T Consensus 298 PN~~H~~~~-------~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 298 PNAGHSLIG-------SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred CCCCcccch-------HHHHHHHHHHHHHHHcC
Confidence 999999982 55788899999887644
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.5e-06 Score=56.49 Aligned_cols=70 Identities=19% Similarity=0.278 Sum_probs=55.7
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhcCCCCC
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCGPKNC 323 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~~~~~ 323 (323)
..|+|++.++.|+.+|.+.++.+.+.+ ++++++.+++.||..+. .....+.+.+.+||..-.....-+.|
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~----~~s~C~~~~v~~yl~~G~lP~~~~~C 103 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYA----GGSPCVDKAVDDYLLDGTLPADGTTC 103 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceec----CCChHHHHHHHHHHHcCCCCCCcCcC
Confidence 589999999999999999999999999 67899999999999984 22245778888888753333333444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-05 Score=59.54 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=66.6
Q ss_pred CCceEEEEecCCC--CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCC--
Q 020630 53 KVKATVYMTHGYG--SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYR-- 128 (323)
Q Consensus 53 ~~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~-- 128 (323)
+++.+|=|+-|.. ....-.|+.+.+.|+++||.|++.-+.- | -++..-..+........++.+.......
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4577888888853 3344578999999999999999987641 0 0000011222233444555555443211
Q ss_pred CCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
..+++-+|||+|+-+-+.+...++.. -++-|+++
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~-r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVE-RAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCc-ccceEEEe
Confidence 24788899999999998888776654 46666665
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.8e-05 Score=67.73 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=66.2
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHh----------------cCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHH
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYA----------------TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~----------------~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
++-+|+|++|..|+.. .-+.++.... ...|+.+++|+-+- - ..-+..+..+.++-+.++
T Consensus 88 sGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~--tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F--TAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h--hhhccHhHHHHHHHHHHH
Confidence 4679999999988754 3444433222 12356777776430 0 011112577777777777
Q ss_pred HHHHHhhCC----C---CCCCEEEEEechhHHHHHHHHhhc---CCCCeeEEEEccCccCCCC
Q 020630 118 FKHVRHSEP----Y---RDLPAFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 118 i~~l~~~~~----~---~~~~~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~~~~ 170 (323)
|+.+...+. . .+..|+++||||||.+|...+... ++. |.-++..+++...++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~s-VntIITlssPH~a~P 224 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGS-VNTIITLSSPHAAPP 224 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccch-hhhhhhhcCcccCCC
Confidence 776654432 1 134599999999999998776542 333 555665665544433
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.4e-05 Score=57.18 Aligned_cols=119 Identities=7% Similarity=0.008 Sum_probs=81.8
Q ss_pred EEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHH
Q 020630 43 FTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~ 122 (323)
++....+....+.|.|+++-...++.....+...+.|... ..|+..|+-....-+-..+. .+++++++.+.+.+..++
T Consensus 91 ~F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~G 168 (415)
T COG4553 91 HFERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLG 168 (415)
T ss_pred hhhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhC
Confidence 3344445444567899999888887654667777777765 78999998755444433333 389999999999999986
Q ss_pred hhCCCCCCCEEEEEechhHH-----HHHHHHhhcCCCCeeEEEEccCccCCCCC
Q 020630 123 HSEPYRDLPAFLFGESMGGA-----ATMLMYFQSEPNTWTGLIFSAPLFVIPEN 171 (323)
Q Consensus 123 ~~~~~~~~~~~l~G~S~Gg~-----~a~~~a~~~p~~~v~~~il~~~~~~~~~~ 171 (323)
. .+++++-|.-+. +++..+...|.. -..+++++++.+....
T Consensus 169 p-------~~hv~aVCQP~vPvLAAisLM~~~~~p~~-PssMtlmGgPIDaR~n 214 (415)
T COG4553 169 P-------DAHVMAVCQPTVPVLAAISLMEEDGDPNV-PSSMTLMGGPIDARKN 214 (415)
T ss_pred C-------CCcEEEEecCCchHHHHHHHHHhcCCCCC-CceeeeecCccccccC
Confidence 4 477888886554 333334445665 7889999887765443
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.4e-06 Score=66.91 Aligned_cols=87 Identities=15% Similarity=0.112 Sum_probs=63.8
Q ss_pred hhHHHHHHHhcCCcEE-----EE-eccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHH
Q 020630 71 MFQKICISYATWGYAV-----FA-ADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAAT 144 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v-----i~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a 144 (323)
.|..+++.|.+.||.. .+ +|+|--- . ..++....+.+.|+...... ..+++|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~------~---~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP------A---ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch------h---hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHH
Confidence 7889999999888742 22 6777211 0 34566777888887776543 5699999999999999
Q ss_pred HHHHhhcCC-----CCeeEEEEccCccCCC
Q 020630 145 MLMYFQSEP-----NTWTGLIFSAPLFVIP 169 (323)
Q Consensus 145 ~~~a~~~p~-----~~v~~~il~~~~~~~~ 169 (323)
..+....+. ..|+++|.++++....
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 998887643 2499999998876533
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00014 Score=57.69 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=74.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
.|..-.+....+++...-||+.|=|+-.. .-..+.+.|.++|+.|+.+|-.-+=.|.. +.++.++|+..+|+.
T Consensus 246 aLPV~e~~a~~~~sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~ 318 (456)
T COG3946 246 ALPVVEVPAKPGNSDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRF 318 (456)
T ss_pred CCCceeeccCCCCcceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHH
Confidence 34444443322234566777777665444 55678999999999999999554444432 688999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
...+.. ..++.|+|+|+|+=+.-..-.+.|.
T Consensus 319 y~~~w~--~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 319 YARRWG--AKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHhhC--cceEEEEeecccchhhHHHHHhCCH
Confidence 988765 7799999999999876655555444
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.9e-05 Score=60.86 Aligned_cols=105 Identities=14% Similarity=0.192 Sum_probs=77.1
Q ss_pred ceEEEEecCCCCCcchh------hHHHHHHHhcCCcEEEEeccccCcCCCCCCCC---------CCChHHHHhhHHHHHH
Q 020630 55 KATVYMTHGYGSDTGWM------FQKICISYATWGYAVFAADLLGHGRSDGIRCY---------LGDMEKVAASSLSFFK 119 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~------~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~---------~~~~~~~~~d~~~~i~ 119 (323)
+.+|+|.-|--++-.|. .-.+++.| +--+|..+.|-+|+|.+-... ..+.++..+|...+|.
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 36888888876554321 12234433 567899999999999732111 1257788899999999
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
.++.+..-...+|+++|-|+||+++..+=.++|.. |.|....+
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi-v~GAlAaS 199 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI-VLGALAAS 199 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhh-hhhhhhcc
Confidence 99988655567999999999999999999999998 66655444
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00044 Score=55.36 Aligned_cols=85 Identities=16% Similarity=0.227 Sum_probs=57.8
Q ss_pred cEEEEeccc-cCcCCCCCCCCC-CChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh----c-----
Q 020630 84 YAVFAADLL-GHGRSDGIRCYL-GDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ----S----- 151 (323)
Q Consensus 84 ~~vi~~d~~-G~G~s~~~~~~~-~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~----- 151 (323)
.+++-+|.| |.|.|-...... .+-++.++|+..+++.+-.+.+ ....+++|.|-|+||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999998 899886443211 1223445788777776655554 456789999999999877766653 1
Q ss_pred CCCCeeEEEEccCccCC
Q 020630 152 EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 152 p~~~v~~~il~~~~~~~ 168 (323)
+.-.++|+++-++....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 12238899998887654
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=9.8e-05 Score=53.06 Aligned_cols=119 Identities=12% Similarity=0.135 Sum_probs=68.2
Q ss_pred CCceEEEEecCCCCCcchhhH---------------HHHHHHhcCCcEEEEecccc---CcCCC-CCCCCCCChHHHHhh
Q 020630 53 KVKATVYMTHGYGSDTGWMFQ---------------KICISYATWGYAVFAADLLG---HGRSD-GIRCYLGDMEKVAAS 113 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~---------------~~~~~l~~~g~~vi~~d~~G---~G~s~-~~~~~~~~~~~~~~d 113 (323)
.+...+|++||.|--....|. ++++...+.||.|++.+--- +-++. .+..+..+..+ .
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~ve---h 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVE---H 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHH---H
Confidence 456799999998853221332 23445556799999987431 11111 12222222222 2
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC-CeeEEEEccCccCCCCCCchhH
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~il~~~~~~~~~~~~~~~ 176 (323)
+.-+..++-.. .....+.++.||.||...+.+..++|+. +|.++.+.+++...+......+
T Consensus 176 ~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~a~~~e~ 237 (297)
T KOG3967|consen 176 AKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQAKNKEY 237 (297)
T ss_pred HHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCchhcCccH
Confidence 22222222221 1255899999999999999999998752 3777777777655444333333
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0002 Score=54.00 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=43.5
Q ss_pred HHHHhhHHHHHH-HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 108 EKVAASSLSFFK-HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 108 ~~~~~d~~~~i~-~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+.+.+.+..-+. ++...+..+.++-.|+|||+||.+++.....+|+. +...++++|..-
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~-F~~y~~~SPSlW 173 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDC-FGRYGLISPSLW 173 (264)
T ss_pred HHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcch-hceeeeecchhh
Confidence 334444433333 33334555577899999999999999999999998 999999998653
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00089 Score=51.44 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=69.3
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCcchhhHHHHHHHhcCC----cEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQKICISYATWG----YAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g----~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+..-.++.|.+ ..+.|++++.||-..........+.+.|...| -.++.+|+--.-. .....+..+.+.+.
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~---R~~~~~~n~~~~~~ 157 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKK---RREELHCNEAYWRF 157 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHH---HHHHhcccHHHHHH
Confidence 33444444443 24579999999854321111223344444332 3566666432100 00001122233333
Q ss_pred H-HHHHHHHHhhCCC--CCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 114 S-LSFFKHVRHSEPY--RDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 114 ~-~~~i~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+ .+++-++...++. ....-+|+|.|+||.+++..+..+|+. +..++..+|...
T Consensus 158 L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~-FG~V~s~Sps~~ 213 (299)
T COG2382 158 LAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPER-FGHVLSQSGSFW 213 (299)
T ss_pred HHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchh-hceeeccCCccc
Confidence 2 3345555555542 233568999999999999999999999 988888887654
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.3e-05 Score=44.13 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=28.7
Q ss_pred cccccCCccceeEEecCCC-cEEEEEecCCC-----CCCceEEEEecCCCCCcchhh
Q 020630 22 YYTSQGVRNGKEYFETPNG-KLFTQSFLPLD-----QKVKATVYMTHGYGSDTGWMF 72 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-----~~~~~~vv~~hG~~~~~~~~~ 72 (323)
+....+.+.+++.+++.|| -|...+..+.. ...+|+|++.||+.+++. .|
T Consensus 4 ~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 4 LIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp HHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred HHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 4456788899999999999 77666654432 356899999999998876 44
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00039 Score=56.91 Aligned_cols=113 Identities=18% Similarity=0.137 Sum_probs=82.2
Q ss_pred CceEEEEecCCCCCc-chhh---HHHHHHHhcCCcEEEEeccccCcCCCCCCCC------CCChHHHHhhHHHHHHHHHh
Q 020630 54 VKATVYMTHGYGSDT-GWMF---QKICISYATWGYAVFAADLLGHGRSDGIRCY------LGDMEKVAASSLSFFKHVRH 123 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~-~~~~---~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~i~~l~~ 123 (323)
.+|..|+|-|=|.-. .|.- ..+...-.+.|-.|+..+.|-+|.|...... ..+..+...|+..+|+.+..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 367888887754322 2210 1222223344889999999999988643322 12577888999999999999
Q ss_pred hCCCCCC-CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 124 SEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 124 ~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+.+.... +++.+|-|+-|.++..+=..+|+. +.+.|..+++..
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel-~~GsvASSapv~ 208 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPEL-TVGSVASSAPVL 208 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchh-heeeccccccee
Confidence 9865444 999999999999999999999999 888887766543
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.6e-05 Score=64.50 Aligned_cols=94 Identities=10% Similarity=0.056 Sum_probs=61.5
Q ss_pred hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHH
Q 020630 70 WMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMY 148 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a 148 (323)
|.|..+++.|++.||. -.++.|...--.... .....+++...+...|+.+....+ +.+++|+||||||.+++.+.
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHH
Confidence 4678999999999996 344444332221110 011235666778888887765543 56999999999999999877
Q ss_pred hhcC--------------CCCeeEEEEccCccC
Q 020630 149 FQSE--------------PNTWTGLIFSAPLFV 167 (323)
Q Consensus 149 ~~~p--------------~~~v~~~il~~~~~~ 167 (323)
..-. ++.|++.|.++++..
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccC
Confidence 6321 113788888877543
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.9e-05 Score=52.52 Aligned_cols=57 Identities=21% Similarity=0.216 Sum_probs=40.6
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC----CCeeEEEEccCcc
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLF 166 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~il~~~~~ 166 (323)
...+...+...++....+++ ..+++++|||+||.+|..++..... . +..++..+++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p--~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~-~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYP--DYKIHVTGHSLGGALAGLAGLDLRGRGLGR-LVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCeEEEEEcCHHHHHHHHHHHHHHhccCCC-ceEEEEeCCCc
Confidence 44556667777776665444 5689999999999999998887644 3 55666666554
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.003 Score=45.30 Aligned_cols=119 Identities=16% Similarity=0.108 Sum_probs=71.2
Q ss_pred EEecCCCCCCceEEEEecCCCCCcchhhH-------HHH----HHH--hcCCcEEEEeccccCcCCCC-C--CCCCCChH
Q 020630 45 QSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KIC----ISY--ATWGYAVFAADLLGHGRSDG-I--RCYLGDME 108 (323)
Q Consensus 45 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-------~~~----~~l--~~~g~~vi~~d~~G~G~s~~-~--~~~~~~~~ 108 (323)
..++..+ ....+.++++|.+.+...... .+. ..+ ...+=.|-++-+.||---.. . ......-+
T Consensus 10 va~GD~d-~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~ 88 (177)
T PF06259_consen 10 VAVGDPD-TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYAR 88 (177)
T ss_pred EEECCcC-CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHH
Confidence 3445444 567799999999866421111 111 111 11222454544444432210 0 01111245
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
.-+.++..+++.|.... ....++.++|||+|+.++-.++...+.. +..+|+++++.
T Consensus 89 ~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~-vddvv~~GSPG 144 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLR-VDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCC-cccEEEECCCC
Confidence 56678888888887765 2256899999999999999888775555 99999887654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00068 Score=51.68 Aligned_cols=59 Identities=22% Similarity=0.294 Sum_probs=39.7
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC----CCCeeEEEEccCcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~il~~~~~ 166 (323)
.+..+..++...+..+..+++ ..++++.|||+||.+|..++.... ...+..+.+-+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p--~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYP--DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCC--CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 445555666666666665554 668999999999999998877522 22266566655544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00026 Score=57.60 Aligned_cols=76 Identities=13% Similarity=0.130 Sum_probs=56.2
Q ss_pred hhhHHHHHHHhcCCcE------EEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHH
Q 020630 70 WMFQKICISYATWGYA------VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAA 143 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~------vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~ 143 (323)
|.|..+++.|..-||. -..+|+|--- ... ...++....+...|+......+ .+|++|++|||||.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~---~~~---e~rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~ 195 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSY---HNS---EERDQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLY 195 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhcc---CCh---hHHHHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHH
Confidence 4788899999888886 3567777211 111 1356666777777877766654 579999999999999
Q ss_pred HHHHHhhcCC
Q 020630 144 TMLMYFQSEP 153 (323)
Q Consensus 144 a~~~a~~~p~ 153 (323)
.+.+...+++
T Consensus 196 ~lyFl~w~~~ 205 (473)
T KOG2369|consen 196 VLYFLKWVEA 205 (473)
T ss_pred HHHHHhcccc
Confidence 9999988776
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0047 Score=49.24 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=52.0
Q ss_pred CcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
.....+.+.+.+..|.++|....+++.+... +-+++..-+.++-|..++ ..++....+...+|+.......
T Consensus 222 ~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~---r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 222 NELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHF---RSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred hcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeee---ccCcHHHHHHHHHHHHhccccc
Confidence 3346788899999999999999888866553 234555666778888875 3455778888999998776543
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0057 Score=46.04 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=33.7
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCcc
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLF 166 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~ 166 (323)
.+.++.+.... ..++.+.|||.||.+|..+|... .++ |.++...+++.
T Consensus 72 ~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~r-I~~vy~fDgPG 123 (224)
T PF11187_consen 72 LAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDR-ISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhh-eeEEEEeeCCC
Confidence 34444444333 33699999999999999998873 335 88888777654
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=48.00 Aligned_cols=77 Identities=12% Similarity=0.042 Sum_probs=49.7
Q ss_pred cEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh------cCCCCee
Q 020630 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ------SEPNTWT 157 (323)
Q Consensus 84 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~~v~ 157 (323)
..+..++||-..... .+..+...=+.++...|+....+.+ ..+++|+|+|.|+.++..++.. ..++ |.
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP--~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~-I~ 113 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCP--NTKIVLAGYSQGAMVVGDALSGDGLPPDVADR-IA 113 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHH-EE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCC--CCCEEEEecccccHHHHHHHHhccCChhhhhh-EE
Confidence 556667777432211 1222455556777888887777776 6799999999999999998876 2234 88
Q ss_pred EEEEccCcc
Q 020630 158 GLIFSAPLF 166 (323)
Q Consensus 158 ~~il~~~~~ 166 (323)
++++++-+.
T Consensus 114 avvlfGdP~ 122 (179)
T PF01083_consen 114 AVVLFGDPR 122 (179)
T ss_dssp EEEEES-TT
T ss_pred EEEEecCCc
Confidence 999887544
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00064 Score=47.32 Aligned_cols=40 Identities=25% Similarity=0.344 Sum_probs=29.5
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.+.+.+..+..+++ ..++++.|||+||.+|..++..
T Consensus 45 ~~~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 344455566666665554 4689999999999999988876
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0015 Score=53.84 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=72.7
Q ss_pred EEEecC-CCCCCceEEEEecCCCCCcchhhHHHHH-------------------HHhcCCcEEEEec-cccCcCCCC-CC
Q 020630 44 TQSFLP-LDQKVKATVYMTHGYGSDTGWMFQKICI-------------------SYATWGYAVFAAD-LLGHGRSDG-IR 101 (323)
Q Consensus 44 ~~~~~~-~~~~~~~~vv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~vi~~d-~~G~G~s~~-~~ 101 (323)
++.+.+ .+..++|+|+++.|.++.++ .+..+.+ .+.+. -.++-+| .-|.|.|.. ..
T Consensus 89 fy~fe~~ndp~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 89 FYTFESPNDPANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEecCCCCCCCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccccccc
Confidence 333433 44456899999999998776 5544422 11111 3688999 558898874 22
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhCC---CCCCCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCcc
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSEP---YRDLPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLF 166 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~ 166 (323)
....++....+|+..+.+.+....+ -...+.+|+|-|+||.-+-.+|..--+ . .++++++++..
T Consensus 167 e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~-~~~~~nlssvl 236 (498)
T COG2939 167 EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA-LNGNVNLSSVL 236 (498)
T ss_pred ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-cCCceEeeeee
Confidence 2233566666776666655544322 113489999999999988777764221 2 45555555443
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.002 Score=51.81 Aligned_cols=106 Identities=13% Similarity=-0.018 Sum_probs=82.6
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC--CChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL--GDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~--~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+|+..-|++.............|. -+-+.+++|-+|.|...+... .++.+.+.|...+++.++.-+ .+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY---~~ 134 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY---PG 134 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc---cC
Confidence 4489999999998764323334554442 467999999999998654321 278999999999999998877 56
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
+.+--|.|-||+.++.+=.-+|+. |++.|.--++
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~D-VD~tVaYVAP 168 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDD-VDGTVAYVAP 168 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCC-CCeeeeeecc
Confidence 899999999999999888889998 9998864433
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0035 Score=54.69 Aligned_cols=121 Identities=16% Similarity=0.079 Sum_probs=67.7
Q ss_pred cEEEEEecCCCCCC--ceEEEEecCCCCCcch--hh--HHHHHHHhcCCcEEEEeccc----cCcCCCCCC-CCCCChHH
Q 020630 41 KLFTQSFLPLDQKV--KATVYMTHGYGSDTGW--MF--QKICISYATWGYAVFAADLL----GHGRSDGIR-CYLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~~~~--~~~vv~~hG~~~~~~~--~~--~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~-~~~~~~~~ 109 (323)
-|+.-+|.|..... .|++|++||.+..... .+ ......+..+..-|+.+.+| |+....... .....+.
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~- 174 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF- 174 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH-
Confidence 56777787776332 6999999998643210 12 11222333445778888887 222221111 1111222
Q ss_pred HHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCcc
Q 020630 110 VAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~ 166 (323)
|...++++++.. .+.+..+|.|+|||.||..+..+.... ... +.++|..++..
T Consensus 175 ---Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~L-F~~aI~~SG~~ 232 (545)
T KOG1516|consen 175 ---DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGL-FHKAISMSGNA 232 (545)
T ss_pred ---HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHH-HHHHHhhcccc
Confidence 444455554443 234578999999999999987766541 123 55566555543
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0038 Score=43.51 Aligned_cols=117 Identities=13% Similarity=0.102 Sum_probs=64.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcch----hhHHHHHHHhcCCc-EEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGW----MFQKICISYATWGY-AVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~----~~~~~~~~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
.+.+..|+..+ .|+|||-.-.|....+ .-..++..+ +.|. ..++++ |-...+--.... +..+.++--.
T Consensus 16 dMel~ryGHaG---~pVvvFpts~Grf~eyed~G~v~ala~fi-e~G~vQlft~~--gldsESf~a~h~-~~adr~~rH~ 88 (227)
T COG4947 16 DMELNRYGHAG---IPVVVFPTSGGRFNEYEDFGMVDALASFI-EEGLVQLFTLS--GLDSESFLATHK-NAADRAERHR 88 (227)
T ss_pred hhhhhhccCCC---CcEEEEecCCCcchhhhhcccHHHHHHHH-hcCcEEEEEec--ccchHhHhhhcC-CHHHHHHHHH
Confidence 55666777765 6777766554433221 112233333 3342 334443 332111111111 2223333333
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+.-+++..+.- ....++-|.||||+.|..+.-++|+. +.++|.+++.++
T Consensus 89 AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~l-ftkvialSGvYd 137 (227)
T COG4947 89 AYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHL-FTKVIALSGVYD 137 (227)
T ss_pred HHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhH-hhhheeecceee
Confidence 33333333321 33577899999999999999999999 999999998775
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=52.79 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=66.8
Q ss_pred CCcEEEEEecCCCCCCceEEEEecCCCCC---c---chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 39 NGKLFTQSFLPLDQKVKATVYMTHGYGSD---T---GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 39 ~g~l~~~~~~~~~~~~~~~vv~~hG~~~~---~---~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.|+=.|..|.++-..++-.|+-+||.|.- + +.+.+.++..| |..|+.+||--.-+.+-+. ..++
T Consensus 380 ~g~~~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaPFPR----aleE--- 449 (880)
T KOG4388|consen 380 NGQRSLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAPFPR----ALEE--- 449 (880)
T ss_pred cCccccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCCCCc----HHHH---
Confidence 35344555655543556788999998742 1 21233344333 7999999986444333221 2222
Q ss_pred hHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh---cCCCCeeEEEEccCccCCC
Q 020630 113 SSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 113 d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~il~~~~~~~~ 169 (323)
+.-+.-|+..+ -+..+++|+++|-|.||.+.+.+|.+ +.-+.-+|+++.-++.-+.
T Consensus 450 -v~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q 511 (880)
T KOG4388|consen 450 -VFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQ 511 (880)
T ss_pred -HHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcc
Confidence 22222222111 11236799999999999877666544 2222256888876655443
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0049 Score=42.43 Aligned_cols=78 Identities=10% Similarity=0.000 Sum_probs=49.8
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcE-EEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYA-VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
...||+.-|+|..++ ....+. +.+ ++. ++++|++..... .++.. -..+.
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi--lpe-N~dl~lcYDY~dl~ld-------fDfsA-------------------y~hir 60 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI--LPE-NHDLLLCYDYQDLNLD-------FDFSA-------------------YRHIR 60 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc--CCC-CCcEEEEeehhhcCcc-------cchhh-------------------hhhhh
Confidence 458999999997765 554443 333 354 578888743211 12211 11567
Q ss_pred EEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
+|++|||-.+|-++....+ +++.+.+++.
T Consensus 61 lvAwSMGVwvAeR~lqg~~---lksatAiNGT 89 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR---LKSATAINGT 89 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc---ccceeeecCC
Confidence 9999999999999887655 5666666554
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0054 Score=49.97 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=38.2
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-------CCCCeeEEEEccCcc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-------p~~~v~~~il~~~~~ 166 (323)
...+++.+.|+.+..+++....++++.|||+||.+|+.+|... +...|..+++-+|-.
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 4556777777777776652222499999999999999988542 111155555555544
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.033 Score=47.32 Aligned_cols=120 Identities=18% Similarity=0.276 Sum_probs=74.0
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH----HHHHHhcCCcEEEEeccccCcCCCC--CCCCCCChHHH----
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK----ICISYATWGYAVFAADLLGHGRSDG--IRCYLGDMEKV---- 110 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~g~~vi~~d~~G~G~s~~--~~~~~~~~~~~---- 110 (323)
.|.+.++.|.+ = ..-++.+-|.|......+.. +...+ .+||.+++-| -||..+.. ......+.+.+
T Consensus 16 ~i~fev~LP~~-W-NgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa 91 (474)
T PF07519_consen 16 NIRFEVWLPDN-W-NGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFA 91 (474)
T ss_pred eEEEEEECChh-h-ccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEec-CCCCCCcccccccccCCHHHHHHHH
Confidence 78889999873 1 22345555544332212222 33444 4699999999 46665543 11111222222
Q ss_pred -------HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 111 -------AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 111 -------~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
+.--.++++..-.+ ....-+..|.|-||.-++..|.++|+. +++|+..+|....
T Consensus 92 ~ra~h~~~~~aK~l~~~~Yg~---~p~~sY~~GcS~GGRqgl~~AQryP~d-fDGIlAgaPA~~~ 152 (474)
T PF07519_consen 92 YRALHETTVVAKALIEAFYGK---APKYSYFSGCSTGGRQGLMAAQRYPED-FDGILAGAPAINW 152 (474)
T ss_pred hhHHHHHHHHHHHHHHHHhCC---CCCceEEEEeCCCcchHHHHHHhChhh-cCeEEeCCchHHH
Confidence 22222333333222 255778999999999999999999999 9999999997653
|
It also includes several bacterial homologues of unknown function. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0065 Score=44.61 Aligned_cols=74 Identities=12% Similarity=0.039 Sum_probs=44.5
Q ss_pred HHHHhcCCcEEEEeccccCcCCCCC----CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc
Q 020630 76 CISYATWGYAVFAADLLGHGRSDGI----RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 76 ~~~l~~~g~~vi~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+..|... .+|+++=||-....... .......+-...|+.+..++.-.+.+ ++++++|+|||.|+.+..++...+
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3445554 68888888743222111 00000122233677666665544432 267999999999999999998874
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.011 Score=48.21 Aligned_cols=39 Identities=21% Similarity=0.347 Sum_probs=25.3
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+.+..+++....+.+ ..++.+.|||+||.+|..+|..
T Consensus 191 Vl~eV~~L~~~y~~~~e--~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGE--EVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCC--cceEEEEcccHHHHHHHHHHHH
Confidence 33444555444332211 3479999999999999988854
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.08 Score=41.33 Aligned_cols=133 Identities=15% Similarity=0.266 Sum_probs=87.4
Q ss_pred ecCCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchh---hHHHHH-----------HHhcCCcEEEEeccc-cCcCC
Q 020630 36 ETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWM---FQKICI-----------SYATWGYAVFAADLL-GHGRS 97 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~---~~~~~~-----------~l~~~g~~vi~~d~~-G~G~s 97 (323)
...++ ..++..|.... ...+|..+.+.|..+.+..- |+.+.+ .|.. -.++.+|-| |.|.|
T Consensus 9 ~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 9 DVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFS 86 (414)
T ss_pred eeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCcee
Confidence 33455 66666665432 13478899999987654322 333221 2222 467888877 77777
Q ss_pred C--CCCCCCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhhc------C--CCCeeEEEEccCcc
Q 020630 98 D--GIRCYLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQS------E--PNTWTGLIFSAPLF 166 (323)
Q Consensus 98 ~--~~~~~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~------p--~~~v~~~il~~~~~ 166 (323)
- +...+..+..+.+.|+.++++.+-...+ .+..|++|+.-|+||-+|..++... . +.++.+++|-+++.
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 5 3334444788999999999998866654 5577999999999999998877542 1 11367888877776
Q ss_pred CCCC
Q 020630 167 VIPE 170 (323)
Q Consensus 167 ~~~~ 170 (323)
...+
T Consensus 167 SP~D 170 (414)
T KOG1283|consen 167 SPED 170 (414)
T ss_pred ChhH
Confidence 5443
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0056 Score=43.94 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=51.2
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHh---cCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKA---SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++|-|-|++|.++.+.+.....+.+ +......++.+|+||+..+.-+ ...+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-RWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-hhhhhhhHHHHHHHHh
Confidence 578888999999999988766655554 3334567888999999997655 5678899999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.014 Score=46.19 Aligned_cols=63 Identities=17% Similarity=0.413 Sum_probs=48.5
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..++..|-.++.++.|.+..++.+...++.+++. .-+.++|+..|... . +.+.+.+..|+++.
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmvPN~~H~~~----n---~~i~esl~~flnrf 387 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMVPNDPHNLI----N---QFIKESLEPFLNRF 387 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCc-eeeeeCCCCcchhh----H---HHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999543 56888999999988 3 22444555565544
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0082 Score=49.02 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+.++.+...++....++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 444444444444332113368999999999999998864
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0098 Score=47.84 Aligned_cols=40 Identities=18% Similarity=0.147 Sum_probs=26.9
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.+.|..+...++....++++.|||+||.+|..+|..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445555555544443223369999999999999988865
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.015 Score=38.21 Aligned_cols=38 Identities=8% Similarity=0.055 Sum_probs=22.8
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG 69 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~ 69 (323)
-..+.+..+| .|++....+.+ ....+|||+||++++--
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GG
T ss_pred CCCeeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHH
Confidence 3456677789 99998887754 55779999999998754
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=47.81 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF 149 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+.+.++.+..+++ ..++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNK--NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHH
Confidence 4444443333333 558999999999999998765
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0096 Score=49.78 Aligned_cols=39 Identities=18% Similarity=0.364 Sum_probs=26.1
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+++..+++....... ..++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge--~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGE--EVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCC--cceEEEeccCHHHHHHHHHHHH
Confidence 34555555554432211 3479999999999999988854
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.015 Score=47.49 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=27.5
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+.+.+-|..+...++....+|.+.|||+||.+|...|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34445555555555443212369999999999999998854
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.038 Score=50.94 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=63.0
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
...|+++|+|.+-+... .+..++..|. .|.+|.-........++++.++....-++.++. ..+.
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP-----~GPY 2184 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQP-----EGPY 2184 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCC-----CCCe
Confidence 34789999999887655 5555554432 233333222222223788777776666666654 4489
Q ss_pred EEEEechhHHHHHHHHhhc--CCCCeeEEEEccCcc
Q 020630 133 FLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~ 166 (323)
.++|+|+|+.++..+|... .+. ...+|++++..
T Consensus 2185 rl~GYSyG~~l~f~ma~~Lqe~~~-~~~lillDGsp 2219 (2376)
T KOG1202|consen 2185 RLAGYSYGACLAFEMASQLQEQQS-PAPLILLDGSP 2219 (2376)
T ss_pred eeeccchhHHHHHHHHHHHHhhcC-CCcEEEecCch
Confidence 9999999999999998753 223 55688887654
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.028 Score=47.93 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+...+..+...++ +-+++++|||+||.+|..++..
T Consensus 235 ~~i~~~L~kal~~~P--dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 235 KLSTPCLLKALDEYP--DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHH
Confidence 344444444444444 5589999999999999888765
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.016 Score=48.07 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=23.5
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF 149 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
...++.+..+++ ..++++.|||+||.+|..+|.
T Consensus 271 ~~~Lk~ll~~~p--~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 271 LRHLKEIFDQNP--TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHCC--CCeEEEEecCHHHHHHHHHHH
Confidence 333444434443 558999999999999998875
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.019 Score=48.00 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+-++.+...++....+|++.|||+||.+|..+|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344444555444443113378999999999999988765
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.017 Score=48.26 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=26.0
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF 149 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
.+...++.+..+++ ..++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 35555555555554 568999999999999998874
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.034 Score=46.68 Aligned_cols=40 Identities=13% Similarity=0.197 Sum_probs=26.4
Q ss_pred HhhHHHHHHHHHhhCC----CCCCCEEEEEechhHHHHHHHHhh
Q 020630 111 AASSLSFFKHVRHSEP----YRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+++.+.|+.+...++ ....++.+.|||+||.+|...|..
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445555555544431 113479999999999999988853
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.037 Score=46.53 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=27.3
Q ss_pred HHhhHHHHHHHHHhhCCC---CCCCEEEEEechhHHHHHHHHhh
Q 020630 110 VAASSLSFFKHVRHSEPY---RDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+.+.+.|+.+..+++. ...+|.+.|||+||.+|...|..
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344555555555444321 13489999999999999998853
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=95.25 E-value=1.6 Score=36.80 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=72.3
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh-HHHHh
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM-EKVAA 112 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~-~~~~~ 112 (323)
+....+ ++.|+ +.|.+ -..|..|..-|+-..-.+.--.+.+.|..- -.+.-|.|--|.+--.... .+ +.+.+
T Consensus 270 ~~D~~reEi~yY-FnPGD-~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~P--fLL~~DpRleGGaFYlGs~--eyE~~I~~ 343 (511)
T TIGR03712 270 LVDSKRQEFIYY-FNPGD-FKPPLNVYFSGYRPAEGFEGYFMMKRLGAP--FLLIGDPRLEGGAFYLGSD--EYEQGIIN 343 (511)
T ss_pred EecCCCCeeEEe-cCCcC-CCCCeEEeeccCcccCcchhHHHHHhcCCC--eEEeeccccccceeeeCcH--HHHHHHHH
Confidence 444455 55443 44443 456888999998754332222344444221 3456677766655322111 12 33445
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
-|.+.+++|+-. ...++|-|.|||..-|+.+++.... .++|+.-|...
T Consensus 344 ~I~~~L~~LgF~----~~qLILSGlSMGTfgAlYYga~l~P---~AIiVgKPL~N 391 (511)
T TIGR03712 344 VIQEKLDYLGFD----HDQLILSGLSMGTFGALYYGAKLSP---HAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHhCCC----HHHeeeccccccchhhhhhcccCCC---ceEEEcCcccc
Confidence 566667777665 6689999999999999999988543 46776666554
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.032 Score=45.02 Aligned_cols=87 Identities=15% Similarity=0.070 Sum_probs=45.6
Q ss_pred CCceEEEEecCCCC-CcchhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCC-CChHHHHhhHHHHHHHHHhhCCCC
Q 020630 53 KVKATVYMTHGYGS-DTGWMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYL-GDMEKVAASSLSFFKHVRHSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~hG~~~-~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~-~~~~~~~~d~~~~i~~l~~~~~~~ 128 (323)
+++-.||++||+-+ +.. .|..-+....+. +..++.....+. ........ .--...++++...+.....
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~Gv~~lG~Rla~~~~e~~~~~si----- 149 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNN--MCQTFDGVDVLGERLAEEVKETLYDYSI----- 149 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccc--hhhccccceeeecccHHHHhhhhhcccc-----
Confidence 45689999999987 334 555555555544 333333333321 11111110 0112233444443333332
Q ss_pred CCCEEEEEechhHHHHHHHH
Q 020630 129 DLPAFLFGESMGGAATMLMY 148 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a 148 (323)
.++-.+|||+||.++..+.
T Consensus 150 -~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 150 -EKISFVGHSLGGLVARYAI 168 (405)
T ss_pred -ceeeeeeeecCCeeeeEEE
Confidence 3899999999999875443
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.058 Score=41.27 Aligned_cols=52 Identities=27% Similarity=0.409 Sum_probs=36.8
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
.+..+..+++..++..++ ..++.+.|||+||.+|..+-.++. +-.+.+-+|.
T Consensus 257 ryySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPG 308 (425)
T COG5153 257 RYYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPG 308 (425)
T ss_pred chhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC---CceEEecCch
Confidence 334455566666666666 778999999999999998887765 3445555543
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.058 Score=41.27 Aligned_cols=52 Identities=27% Similarity=0.409 Sum_probs=36.8
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
.+..+..+++..++..++ ..++.+.|||+||.+|..+-.++. +-.+.+-+|.
T Consensus 257 ryySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg---lP~VaFesPG 308 (425)
T KOG4540|consen 257 RYYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG---LPVVAFESPG 308 (425)
T ss_pred chhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC---CceEEecCch
Confidence 334455566666666666 778999999999999998887765 3445555543
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.051 Score=45.61 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=27.6
Q ss_pred HHhhHHHHHHHHHhhCCC---CCCCEEEEEechhHHHHHHHHhh
Q 020630 110 VAASSLSFFKHVRHSEPY---RDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+++.+.|+.+...++. ...++.+.|||+||.+|..+|..
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555555555554431 12379999999999999998854
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.12 Score=38.99 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=37.4
Q ss_pred CcEEEEeccccC-cCCC--CCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 83 GYAVFAADLLGH-GRSD--GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 83 g~~vi~~d~~G~-G~s~--~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
|+.+..+++|.. +--. +......+..+=++.+.+.|+..... +.+++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~----~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAA----GGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccC----CCCEEEEEECHHHHHHHHHHHH
Confidence 577788888861 1100 11111123444444444444443223 5689999999999999887765
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.19 Score=40.56 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=28.9
Q ss_pred CCCEEEEEechhHHHHHHHHhhcCCC----CeeEEEEccCccC
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFV 167 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~il~~~~~~ 167 (323)
.+|+.|+|||+|+.+...++..-.++ .|..+++++.+..
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 55899999999999988766542221 1788999887654
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.083 Score=42.78 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=25.3
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.++.+...++ .-++.+.|||+||.+|..+|..
T Consensus 156 ~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 34444444444443 4589999999999999988865
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=93.45 E-value=2.2 Score=35.03 Aligned_cols=52 Identities=13% Similarity=0.016 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh----cCCCCeeEEEEccC
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ----SEPNTWTGLIFSAP 164 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~il~~~ 164 (323)
.-+.++++++..+.-.+.++++|.|.|.||.-++..+.. .|.. ++-..+.++
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~-~~v~~~~Ds 193 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSS-VKVKCLSDS 193 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccC-ceEEEeccc
Confidence 345666776666522235689999999999988875543 5543 444444443
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.45 Score=40.77 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=35.9
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh-----cCC-----CCeeEEEEccCc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ-----SEP-----NTWTGLIFSAPL 165 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~-----~~v~~~il~~~~ 165 (323)
.++.-...+++.+....-.++.+++.+||||||.++=.+... .|+ ++-+|+|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 344444556666655443347799999999999988665543 232 125677776654
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.59 Score=39.95 Aligned_cols=64 Identities=23% Similarity=0.300 Sum_probs=49.1
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhc----CC------CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKAS----SA------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
--.+++.||..|.++|+.....+++++. .. -.++..+||.+|+.--.-+. .-.....|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~--~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPD--PFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCC--CCCHHHHHHHHHhC
Confidence 4689999999999999999888887762 11 24789999999998743222 23578889999885
|
It also includes several bacterial homologues of unknown function. |
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=89.93 E-value=3.7 Score=26.48 Aligned_cols=84 Identities=12% Similarity=0.009 Sum_probs=50.6
Q ss_pred hhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhH--HHHHHHH
Q 020630 71 MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGG--AATMLMY 148 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg--~~a~~~a 148 (323)
.|..+.+.+..+||-.-.+.++..|.+..........+.=...+..+++.. + ..+++++|-|--. -+-..+|
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f----P--~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF----P--ERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC----C--CCcEEEEeeCCCcCHHHHHHHH
Confidence 455666677677887777888877655322111101112223444444444 3 5599999999543 3445677
Q ss_pred hhcCCCCeeEEEE
Q 020630 149 FQSEPNTWTGLIF 161 (323)
Q Consensus 149 ~~~p~~~v~~~il 161 (323)
.++|++ |.++.+
T Consensus 86 ~~~P~~-i~ai~I 97 (100)
T PF09949_consen 86 RRFPGR-ILAIYI 97 (100)
T ss_pred HHCCCC-EEEEEE
Confidence 889998 888764
|
|
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=88.44 E-value=5.5 Score=31.48 Aligned_cols=94 Identities=15% Similarity=0.084 Sum_probs=51.1
Q ss_pred eEEEEecCCCCCcchh-----hHHHHHHH-hcCCcEEEEeccccCcCC--------CCCCC--CCC-ChHHHHhhHHHHH
Q 020630 56 ATVYMTHGYGSDTGWM-----FQKICISY-ATWGYAVFAADLLGHGRS--------DGIRC--YLG-DMEKVAASSLSFF 118 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~-----~~~~~~~l-~~~g~~vi~~d~~G~G~s--------~~~~~--~~~-~~~~~~~d~~~~i 118 (323)
..|||+=|.+.+.... -..+.+.+ ...+-..+.+=.+|.|.. ..... ... .-..+.+.|....
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 4678888876543211 13344455 222334555566777771 11000 000 0122334455555
Q ss_pred HHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 119 KHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+...+. ...++.++|+|-|+.+|-.+|..
T Consensus 82 ~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYE-PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccC-CcceEEEEecCccHHHHHHHHHH
Confidence 55544432 25579999999999999998876
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.75 E-value=2.7 Score=35.54 Aligned_cols=120 Identities=15% Similarity=0.104 Sum_probs=59.6
Q ss_pred cEEEEEecC-CCCCCceEEEEecCCCCCc---c-hhhHHHHHHHhcCC-cEEEEeccc----c---CcCCCCCCCCCCCh
Q 020630 41 KLFTQSFLP-LDQKVKATVYMTHGYGSDT---G-WMFQKICISYATWG-YAVFAADLL----G---HGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~-~~~~~~~~vv~~hG~~~~~---~-~~~~~~~~~l~~~g-~~vi~~d~~----G---~G~s~~~~~~~~~~ 107 (323)
-|..-+|.| .+.....++|++-|.|.-+ . ..|+ .+.|+..+ --|+.+++| | .+..+..++...-+
T Consensus 120 CLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~ 197 (601)
T KOG4389|consen 120 CLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLL 197 (601)
T ss_pred ceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchH
Confidence 366677877 3334456888888876321 1 1222 33454432 345556665 1 12222223322223
Q ss_pred HHH--HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCccC
Q 020630 108 EKV--AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 108 ~~~--~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~~ 167 (323)
++. ...+.+-|...+. +..++.|+|.|.|+.-...-... -... ++..|+-++...
T Consensus 198 DQqLAl~WV~~Ni~aFGG----np~~vTLFGESAGaASv~aHLlsP~S~gl-F~raIlQSGS~~ 256 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGG----NPSRVTLFGESAGAASVVAHLLSPGSRGL-FHRAILQSGSLN 256 (601)
T ss_pred HHHHHHHHHHHhHHHhCC----CcceEEEeccccchhhhhheecCCCchhh-HHHHHhhcCCCC
Confidence 332 2344444444443 47799999999998654322211 1122 566666555443
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=86.71 E-value=8.8 Score=42.80 Aligned_cols=98 Identities=11% Similarity=-0.001 Sum_probs=65.8
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
.+.+++.|+..++.. .+..+...+.. +..++.+..++.-.... ...+++.++....+.+.+.... .+..+
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~-~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~-----~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEG-DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAK-----GPYGL 3761 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCC-CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccC-----CCeee
Confidence 356999999887654 67777777754 47888887765432211 1126777777777777766543 37899
Q ss_pred EEechhHHHHHHHHhh---cCCCCeeEEEEcc
Q 020630 135 FGESMGGAATMLMYFQ---SEPNTWTGLIFSA 163 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~---~p~~~v~~~il~~ 163 (323)
.|+|+||.++..++.. ..+. +.-+.++.
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~-~~~~~~~~ 3792 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGES-EAFLGLFD 3792 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCc-eeEEEEEe
Confidence 9999999999888765 3333 55555543
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=83.72 E-value=1.7 Score=35.80 Aligned_cols=69 Identities=17% Similarity=0.160 Sum_probs=46.1
Q ss_pred HHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccC-CchhHHHHHHHHHHHHH
Q 020630 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWID 312 (323)
Q Consensus 240 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~ 312 (323)
+...+++-.-.+|+|+|++|+..-.. ..+.. +..++.+.+.||++|...+.. ++....+....|.+|..
T Consensus 343 I~~Wvr~~~~rmlFVYG~nDPW~A~~--f~l~~--g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 343 IDRWVRNNGPRMLFVYGENDPWSAEP--FRLGK--GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHhCCCeEEEEeCCCCCcccCc--cccCC--CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 33444555678999999999875321 11111 235678888899999887643 34556777788888864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG3673 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.72 E-value=12 Score=30.02 Aligned_cols=105 Identities=11% Similarity=-0.020 Sum_probs=62.6
Q ss_pred CCceEEEEecCCCCC----cchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCC----------CCCCC--hHHHHhhHH
Q 020630 53 KVKATVYMTHGYGSD----TGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIR----------CYLGD--MEKVAASSL 115 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~----------~~~~~--~~~~~~d~~ 115 (323)
..+..|+++-|.... ....--.+...|.. .+-+++++=-+|.|.-.-.. ....+ -..+.+.|.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 346788888885422 11122334555554 57888888888888653110 00000 122345566
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
.+...|...+. .+.+|+++|+|-|+.+|--+|.. |..+-+++
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm-----ir~vGlls 150 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM-----IRHVGLLS 150 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH-----HHHhhhhc
Confidence 66666665543 25689999999999999888876 44454444
|
|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.56 E-value=18 Score=26.32 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=29.9
Q ss_pred CCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEec
Q 020630 53 KVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAAD 90 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d 90 (323)
+.++.+|++-|+.++. +..-..+.+.|.++|++++..|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 3467999999998774 3244567788888999999998
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 323 | ||||
| 3jwe_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase In | 1e-22 | ||
| 3pe6_A | 303 | Crystal Structure Of A Soluble Form Of Human Mgll I | 2e-22 | ||
| 3hju_A | 342 | Crystal Structure Of Human Monoglyceride Lipase Len | 2e-22 | ||
| 3jw8_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase Le | 2e-21 | ||
| 3qit_A | 286 | Thioesterase Domain From Curacin Biosynthetic Pathw | 4e-05 | ||
| 1a8s_A | 273 | Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | 3e-04 |
| >pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In Complex With Sar629 Length = 320 | Back alignment and structure |
|
| >pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In Complex With An Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase Length = 342 | Back alignment and structure |
|
| >pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase Length = 320 | Back alignment and structure |
|
| >pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway Length = 286 | Back alignment and structure |
|
| >pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 7e-94
Identities = 78/322 (24%), Positives = 140/322 (43%), Gaps = 23/322 (7%)
Query: 1 MPQETQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVY 59
MP+E+ P P +P ++ + +G LF + + P KA ++
Sbjct: 1 MPEESSPRRTPQS---IPYQDL----------PHLVNADGQYLFCRYWAP-TGTPKALIF 46
Query: 60 MTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
++HG G +G ++++ VFA D +GHG+S+G R + D L
Sbjct: 47 VSHGAGEHSGR-YEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVD 105
Query: 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179
++ + Y LP FL G SMGGA ++ P + G++ +PL + +
Sbjct: 106 SMQ--KDYPGLPVFLLGHSMGGAIA-ILTAAERPGHFAGMVLISPLVLANPESAT-TFKV 161
Query: 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY 239
+L + ++ P + V ++ ++ + S+P +V ++
Sbjct: 162 LAAKVLNSVLPNLSSGPIDSSV--LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSR 219
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
++ K+TVPFL + G+AD + + LL E A S DK++KIY+G YH + E E
Sbjct: 220 VERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV-LHKELPEV 278
Query: 300 ANLVLKDMREWIDERVERCGPK 321
N V ++ W+ +R G
Sbjct: 279 TNSVFHEINMWVSQRTATAGTA 300
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 280 bits (717), Expect = 3e-93
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 14/321 (4%)
Query: 4 ETQPETPPNYWGYMPEEEYYTSQGV-RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMT 61
P T Q + + +G LF + + P KA ++++
Sbjct: 11 GAGDRGPEFPE---ESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKP-TGTPKALIFVS 66
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
HG G +G ++++ VFA D +GHG+S+G R + D L +
Sbjct: 67 HGAGEHSGR-YEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM 125
Query: 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181
+ + Y LP FL G SMGGA ++ P + G++ +PL + +
Sbjct: 126 Q--KDYPGLPVFLLGHSMGGAIA-ILTAAERPGHFAGMVLISPLVLANPESAT-TFKVLA 181
Query: 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241
+L + + P + V ++ ++ + S+P +V ++ ++
Sbjct: 182 AKVLNLVLPNLSLGPIDSSV--LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVE 239
Query: 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENAN 301
K+TVPFL + G+AD + + LL E A S DK++KIY+G YH + E E N
Sbjct: 240 RALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV-LHKELPEVTN 298
Query: 302 LVLKDMREWIDERVERCGPKN 322
V ++ W+ +R G +
Sbjct: 299 SVFHEINMWVSQRTATAGTAS 319
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 7e-38
Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 46/301 (15%)
Query: 15 GYMPEEEYYTSQG-VRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ 73
G +P + + Q V +G E F NG V + HG+ T +
Sbjct: 13 GLVPRGSHMSEQYPVLSGAEPFYAENGP--------------VGVLLVHGFT-GTPHSMR 57
Query: 74 KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133
+ +YA GY V L GHG AS + ++ R F
Sbjct: 58 PLAEAYAKAGYTVCLPRLKGHGTHYE-DMERTTFHDWVASVEEGYGWLKQ----RCQTIF 112
Query: 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193
+ G SMGG T L + P+ + +A + + + G+
Sbjct: 113 VTGLSMGGTLT-LYLAEHHPDICGIVPINAAVDI--------------PAIAAGMTGGGE 157
Query: 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253
+G +K+P+ Y P ++ ++AR+ + ++ P L
Sbjct: 158 LPRYLDSIGSDLKNPDV------KELAYEKTP-TASLLQLARLMAQTKAKLDRIVCPALI 210
Query: 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
D V P ++ ++++ SS +K I YH D + ++++ E+ +
Sbjct: 211 FVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATL---DYDQPMIIERSLEFFAK 267
Query: 314 R 314
Sbjct: 268 H 268
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 1e-33
Identities = 41/267 (15%), Positives = 89/267 (33%), Gaps = 37/267 (13%)
Query: 52 QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL-GDMEKV 110
+ V + H Y + + + GY V+ GHG + + G+ +
Sbjct: 19 EGTDTGVVLLHAYT-GSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIW 77
Query: 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170
A S + H+ + F+FG S+GG + ++ P G +FS+P+
Sbjct: 78 WAESSAAVAHMTA----KYAKVFVFGLSLGGIFA-MKALETLPGITAGGVFSSPILPGKH 132
Query: 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTM 230
++ P A+ + K E +++A P + +
Sbjct: 133 HLVP---------GFLKYAEYMNRLAG--------KSDESTQILAYLPGQ---------L 166
Query: 231 REIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK-ASSADKSIKIYDGMYH 289
I + + + + V P D + + L + ++A YD H
Sbjct: 167 AAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKH 226
Query: 290 SLIQGEPDENANLVLKDMREWIDERVE 316
+ + + + +D+ ++ + E
Sbjct: 227 VITV---NSAHHALEEDVIAFMQQENE 250
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 3e-33
Identities = 38/261 (14%), Positives = 91/261 (34%), Gaps = 34/261 (13%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG--DMEKVAA 112
+ V + HG+ + + + GY A GHG + G D +
Sbjct: 16 ERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVM 74
Query: 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172
+ F K+ + + G S+GG ++ + + + AP+++ E
Sbjct: 75 NGYEFLKNKGYE------KIAVAGLSLGGVFSLKLGYTVPIEG--IVTMCAPMYIKSEET 126
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
+ + ++ + + I ++ P + T++
Sbjct: 127 MYEGVLEYAREYK-------------------KREGKSEEQIEQEMEKFKQTP-MKTLKA 166
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ + ++D+ + P V D + P S+ ++Y + S K IK Y+ H +
Sbjct: 167 LQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVIT 226
Query: 293 QGEPDENANLVLKDMREWIDE 313
D+ + + +D+ +++
Sbjct: 227 L---DQEKDQLHEDIYAFLES 244
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 1e-24
Identities = 54/294 (18%), Positives = 102/294 (34%), Gaps = 56/294 (19%)
Query: 32 KEYFETPNG-KLFTQSFLPLDQKVK-ATVYMTHGYGSD-TGWMFQKICISYATWGYAVFA 88
+ +G KL +P + K + HG+ + + G A
Sbjct: 2 GAMYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLR 61
Query: 89 ADLLGHGRSDG------IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGA 142
AD+ GHG+SDG + +L ++ V + + + ++ G S GG
Sbjct: 62 ADMYGHGKSDGKFEDHTLFKWLTNILAVV-------DYAK-KLDFVT-DIYMAGHSQGGL 112
Query: 143 ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVG 202
+ +++ E + LI +P +IPE + +L + + D A K+ G
Sbjct: 113 S-VMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPE-NIPDELDAWDGRKLKG 170
Query: 203 KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
++ + ++V D K T P L VHG D
Sbjct: 171 NYVRVAQTIRVE---------------------------DFVDKYTKPVLIVHGDQD-EA 202
Query: 263 CPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
P S ++ + + G H D + LV + ++E++ E++
Sbjct: 203 VPYEASVAFSKQYK--NCKLVTIPGDTHCY-----DHHLELVTEAVKEFMLEQI 249
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 93.9 bits (233), Expect = 3e-22
Identities = 33/263 (12%), Positives = 71/263 (26%), Gaps = 33/263 (12%)
Query: 33 EYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAA 89
NG +L P + T+ + G+ + +T G+ VF
Sbjct: 10 HVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF-AGLAEYLSTNGFHVFRY 68
Query: 90 DLLGH-GRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMY 148
D L H G S G M S + + ++ L S+ +
Sbjct: 69 DSLHHVGLSSGSIDEFT-MTTGKNSLCTVYHWLQTKGT---QNIGLIAASLSARVAYEVI 124
Query: 149 FQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208
E + LI + + + + ++ + L + ++P +++ +
Sbjct: 125 SDLELS---FLITAVGVVNLRDTLEKA------------LGFDYLSLPIDELPNDLDFEG 169
Query: 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268
KL + + + + +VP + D
Sbjct: 170 HKL-----GSEVFVRDCFEHHWDTLDSTLDKV----ANTSVPLIAFTANNDDWVKQEEVY 220
Query: 269 LLYEKASSADKSIKIYDGMYHSL 291
+ + + G H L
Sbjct: 221 DMLAHIRTGHCKLYSLLGSSHDL 243
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 6e-21
Identities = 41/264 (15%), Positives = 85/264 (32%), Gaps = 40/264 (15%)
Query: 51 DQKVKATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
++ + HG+ ++ + ++I S A D GHG SDG + + +
Sbjct: 42 FGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNE 101
Query: 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169
+ + + +V+ R +L G + GG M P+ ++ AP +
Sbjct: 102 IED-ANAILNYVKTDPHVR--NIYLVGHAQGGVV-ASMLAGLYPDLIKKVVLLAPAATLK 157
Query: 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGT 229
+ + G G+ +PD L++ P
Sbjct: 158 GD--------ALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLP----------- 198
Query: 230 MREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289
I + ++ T P +HGT D V P +SK + + ++ + +G H
Sbjct: 199 ----------IYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQI--YQNSTLHLIEGADH 246
Query: 290 SLIQGEPDENANLVLKDMREWIDE 313
+ +++
Sbjct: 247 CFSDSYQKN----AVNLTTDFLQN 266
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 70.8 bits (173), Expect = 7e-14
Identities = 35/269 (13%), Positives = 67/269 (24%), Gaps = 50/269 (18%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106
+P V M G S FQ + G A D G G + GD
Sbjct: 144 RIPEGPGPHPAVIMLGGLESTKEESFQ-MENLVLDRGMATATFDGPGQGEMFEYKRIAGD 202
Query: 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL- 165
EK ++ + + + G S+GG + EP + +
Sbjct: 203 YEKYTSAVVDLLTKLEAIRNDA---IGVLGRSLGGNYALKSAAC-EPRLAACISWGGFSD 258
Query: 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKP 225
+ P + Y + + +L V +
Sbjct: 259 LDYWDLETPLTKESWKY-----------------VSKVDTLEEARLHVH----AALETRD 297
Query: 226 RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
+ ++ P +HG D V + + E + ++ +
Sbjct: 298 VLS-----------------QIACPTYILHGVHDEV-PLSFVDTVLELVPAEHLNLVVEK 339
Query: 286 GMYHSLIQGEPDENANLVLKDMREWIDER 314
H +M +W+ +
Sbjct: 340 DGDHCCH-----NLGIRPRLEMADWLYDV 363
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 67.7 bits (165), Expect = 7e-13
Identities = 49/288 (17%), Positives = 87/288 (30%), Gaps = 50/288 (17%)
Query: 35 FETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH 94
GK+ L K V ++ G S M++ A A+ D+
Sbjct: 173 IPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSV 232
Query: 95 GRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGG-AATMLMYFQSEP 153
G S D ++ + L+ + + + +R L G GG A L + E
Sbjct: 233 GYSSKYP-LTEDYSRLHQAVLNELFSIPYVDHHR---VGLIGFRFGGNAMVRLSFL--EQ 286
Query: 154 NTWTGLIFSAP----LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
+ +F P+ ++ + D A+ +GK++ D
Sbjct: 287 EKIKACVILGAPIHDIFASPQKLQ---------QMPKMYLDVLAS-----RLGKSVVDIY 332
Query: 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
L G M + Q + K VP L + D V P S
Sbjct: 333 SLS---------------GQMAAWSLKVQGFLSS-RKTKVPILAMSLEGDPV-SPYSDNQ 375
Query: 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
+ S+ K+ KI + L +W+++ + R
Sbjct: 376 MVAFFSTYGKAKKISSKTIT--------QGYEQSLDLAIKWLEDELLR 415
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 63.6 bits (154), Expect = 2e-11
Identities = 37/270 (13%), Positives = 90/270 (33%), Gaps = 22/270 (8%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106
+ + K + T+ + G + +F + S Y V DL G G++ +
Sbjct: 151 AIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEV 210
Query: 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
+ A S++ + + + G S GG T + + A
Sbjct: 211 DARAAISAILDWYQAPTEKIA------IAGFSGGGYFT-AQAVEKDKR------IKA--- 254
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
I +F L + + ++ ++ + ++
Sbjct: 255 WIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKY-AWQFGQVDF 313
Query: 227 VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA--DKSIKIY 284
+ ++ E+ Q +++K+ VP L + G + S++LY+ D +++ +
Sbjct: 314 ITSVNEVLE--QAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKF 371
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWIDER 314
+ + + N L+ + EW++
Sbjct: 372 SSESGADAHCQVN-NFRLMHYQVFEWLNHI 400
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 7e-11
Identities = 47/314 (14%), Positives = 80/314 (25%), Gaps = 57/314 (18%)
Query: 49 PLDQKVKATVYMTHGYGSDTGW---MFQKICISYATWGY---AVFAADLLGHGRSD---- 98
+ + HG G ++ + A Y V D + HG S
Sbjct: 46 RSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNR 105
Query: 99 ---GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNT 155
G D A L S + G SMGG + +PN
Sbjct: 106 GRLGTNFNWIDG---ARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVL-QPNL 161
Query: 156 WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA----------DTWAAMPD------NK 199
+ LI P+ + + + + L D +A + N
Sbjct: 162 FHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNG 221
Query: 200 MVGKAIKDPEKLKVIASNPRRYTGKPRVG---------------TMREIARVCQYIQDNF 244
+ L+ I R + ++ N
Sbjct: 222 SFFTNA-HSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNV 280
Query: 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-PDENANLV 303
V + + G P + L + + + + G H L+ E PD V
Sbjct: 281 KFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNY--HLDVIPGGSH-LVNVEAPDL----V 333
Query: 304 LKDMREWIDERVER 317
++ + I E V
Sbjct: 334 IERINHHIHEFVLT 347
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 9e-11
Identities = 42/284 (14%), Positives = 81/284 (28%), Gaps = 31/284 (10%)
Query: 33 EYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADL 91
+ + + Q + T GY SD TG ++ A+ G D
Sbjct: 15 TVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDY 74
Query: 92 LGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS 151
GHG S G G + + +L+ H + E + + + G L
Sbjct: 75 SGHGASGG-AFRDGTISRWLEEALAVLDHFK-PEKAILVGSSMGGWIALRLIQELKARHD 132
Query: 152 EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211
P +G++ AP ++ ++G +
Sbjct: 133 NPTQVSGMVLIAPAPDFTSDL------------------------IEPLLGDRERAELAE 168
Query: 212 KVIASNPRRYTGKPRVGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
Y+ +P + T + + P + G AD + L
Sbjct: 169 NGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKL 228
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
E + D + + H L ++ + + +R I+ R
Sbjct: 229 VEHLPADDVVLTLVRDGDHRL---SRPQDIDRMRNAIRAMIEPR 269
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 9e-11
Identities = 42/267 (15%), Positives = 94/267 (35%), Gaps = 39/267 (14%)
Query: 51 DQKVKATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
++K T+ HG G + + Y Y DL GHG S G +
Sbjct: 12 NKKSPNTLLFVHGSGCNLKIFGEL---EKYLE-DYNCILLDLKGHGESKGQCPS--TVYG 65
Query: 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLF 166
+ +F + ++ ++ L G SMGGA + + + ++ A
Sbjct: 66 YIDNVANFITNSEVTKHQKN--ITLIGYSMGGAIVLGVALKK-LPNVRKVVSLSGGARFD 122
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ ++ FM + D + + + + + + + +P
Sbjct: 123 KLDKD--------FMEKIYHNQLDNNYLLECIGGIDNPLSE-KYFETLEKDPD------- 166
Query: 227 VGTMREIARVCQY--IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284
M C+ + DN + +P + + +T S+++ ++ ++ +KI+
Sbjct: 167 --IMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS--ELKIF 222
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWI 311
+ H L NA V ++++ +I
Sbjct: 223 ETGKHFL----LVVNAKGVAEEIKNFI 245
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-10
Identities = 35/260 (13%), Positives = 71/260 (27%), Gaps = 18/260 (6%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
+ HG D +S Y DL G G SD I + V + +
Sbjct: 23 PIIFLHGLSLDKQSTCLFFEPLSNVG-QYQRIYLDLPGMGNSDPISPS--TSDNVLETLI 79
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENMK 173
+ + + L+G S GG + F + G+ + +
Sbjct: 80 EAIEEIIGAR-----RFILYGHSYGGYLAQAIAFHL-KDQTLGVFLTCPVITADHSKRLT 133
Query: 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233
+++ + + A + V + + + + K + ++
Sbjct: 134 GKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNN 193
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
+ PF + G D V L + I + + H+L
Sbjct: 194 YSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENG--EIVLLNRTGHNL-- 249
Query: 294 GEPDENANLVLKDMREWIDE 313
+ V ++DE
Sbjct: 250 --MIDQREAVGFHFDLFLDE 267
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 5e-10
Identities = 46/208 (22%), Positives = 76/208 (36%), Gaps = 35/208 (16%)
Query: 15 GYMPEEEYYTSQGVRNG-KEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMF 72
G +EE+ G R ++ N + ++ + HGY W
Sbjct: 1 GMALQEEFIDVNGTRVFQRKMVTDSNRR---------------SIALFHGYSFTSMDWDK 45
Query: 73 QKICISYATWGYAVFAADLLGHGRSDGIRCY---LGDMEKVAASSLSFFKHVRHSEPYRD 129
+ +Y+ GY V+A D G GRS Y GD++ A + K +
Sbjct: 46 ADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVA----- 100
Query: 130 LPAFLFGESMGGA---ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186
+ + G SMGG T L Y P+ G+I AP +V K+ L++
Sbjct: 101 -RSVIMGASMGGGMVIMTTLQY----PDIVDGIIAVAPAWVESLKGDMKKIRQKTL-LVW 154
Query: 187 GLADTWAAMPDNKMVGKAIKDPEKLKVI 214
G D + +K I +L+++
Sbjct: 155 GSKDHVVPIALSKEYASIISG-SRLEIV 181
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 6e-10
Identities = 45/271 (16%), Positives = 76/271 (28%), Gaps = 67/271 (24%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG------IRCYLGDME 108
KA + HG + + YA G+ + A D HG +G Y+ ++
Sbjct: 24 KALLLALHGLQGSKEHILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 109 KVAASSLSFFKHVRHSEPYRD-LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167
+VA + V R LP FL G S+G + L F F
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGA-FVAHLLLAEGFRPRGVLAFIGSGF- 140
Query: 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
+P G+ ++DP L + + P
Sbjct: 141 ------------------------PMKLPQ----GQVVEDPGVLALYQAPPATRGEA--- 169
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK----I 283
V +HG+ D + + E + +
Sbjct: 170 -----YGGVPLLH-------------LHGSRDHIVPLARMEKTLEALRPHYPEGRLARFV 211
Query: 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314
+G H+L A + L + W++ R
Sbjct: 212 EEGAGHTL----TPLMARVGLAFLEHWLEAR 238
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 57.7 bits (138), Expect = 1e-09
Identities = 52/350 (14%), Positives = 95/350 (27%), Gaps = 55/350 (15%)
Query: 6 QPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG 65
+ N W E+ Y + G LP + G
Sbjct: 18 NDQLIENIWKMKREDSPYDIISLH----KVNLIGGGNDAVLILPGTWSSGEQLVTISWNG 73
Query: 66 SDTG--WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG------DMEKVAASSLSF 117
+ I + A G+ V+ D H ++ +
Sbjct: 74 VHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEV 133
Query: 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLF--VIPENMK 173
++ +L GES GG A + N GLI P + P+
Sbjct: 134 VSFIKRDSGQ--ERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYT 191
Query: 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP------EKLKVI------------A 215
P + P+N + A+ +P K K I +
Sbjct: 192 PEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGS 251
Query: 216 SNPRRYTGKPRVGTMREIARVCQY----------IQDNFSKVTVPFLTVHGTADGVTCPT 265
+NP Y + +A Y ++ ++ + VP + G+
Sbjct: 252 ANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIFD 311
Query: 266 SSKLLYEKASSADKSIKIYDGMYH-SLIQGEPDENANLVLKDMREWIDER 314
S L ++ I + G H + GE + V + +W+ ++
Sbjct: 312 SKIL------PSNSEIILLKGYGHLDVYTGE--NSEKDVNSVVLKWLSQQ 353
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 7e-09
Identities = 44/208 (21%), Positives = 74/208 (35%), Gaps = 24/208 (11%)
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
HG+G + +++ I ++ + + DL G GRS G + +A + V
Sbjct: 20 HGWGLN-AEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGAL--SLADMAEA-------V 68
Query: 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPEN---MKPSK 176
P A G S+GG + P L+ S+P F + +KP
Sbjct: 69 LQQAP---DKAIWLGWSLGGLVASQIALTH-PERVRALVTVASSPCFSARDEWPGIKPDV 124
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVG--KAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
L F L T + +G A +D LK G + +
Sbjct: 125 LAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK 184
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVT 262
V ++ V++PFL ++G DG+
Sbjct: 185 TV--DLRQPLQNVSMPFLRLYGYLDGLV 210
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 2e-08
Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 28/288 (9%)
Query: 32 KEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS-DTGWMFQKICISYATWGYAVFAAD 90
KE T G ++T ++ G G T F I I + D
Sbjct: 23 KEMVNTLLGPIYTCH-----REGNPCFVFLSGAGFFSTADNFANI-IDKLPDSIGILTID 76
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150
G S + + L F+H + L S+GG A + + Q
Sbjct: 77 APNSGYSPVSNQANVGLRDWVNAILMIFEHFKFQ------SYLLCVHSIGGFAALQIMNQ 130
Query: 151 SEPNTWTGLIFSAP-LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
S G I P +I S L+ + L + K + ++ +
Sbjct: 131 S-SKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQ 189
Query: 210 KLKVIAS----NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265
+ K + R+ + + + + +P + +
Sbjct: 190 QFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESFR-----E 244
Query: 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
L E + ++ I G +H L E + +L+ + + +
Sbjct: 245 KEYLESEYLNKHTQTKLILCGQHHYLHWSETNS----ILEKVEQLLSN 288
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 2e-08
Identities = 39/264 (14%), Positives = 71/264 (26%), Gaps = 57/264 (21%)
Query: 57 TVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113
V HG+G + ++ G DL GH +R + +
Sbjct: 30 GVLFVHGWGGSQHHSLVRAREA----VGLGCICMTFDLRGHEGYASMRQSV-TRAQNLDD 84
Query: 114 SLSFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172
+ + + S PY D + G S GG + L+ + L +P +
Sbjct: 85 IKAAYDQLA-SLPYVDAHSIAVVGLSYGGYLSALLTRERPVE---WLALRSPALYKDAHW 140
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
K+ L L A DN
Sbjct: 141 DQPKVSLNADPDLMDYRRRALAPGDN--------------------------------LA 168
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK-IYDGMYHSL 291
+A ++ L V D + + + ++A + G H+L
Sbjct: 169 LAAC--------AQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHAL 220
Query: 292 IQGEPDENANLVLKDMREWIDERV 315
E+ + + +W+ E V
Sbjct: 221 ---SVKEHQQEYTRALIDWLTEMV 241
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 6e-08
Identities = 36/217 (16%), Positives = 60/217 (27%), Gaps = 18/217 (8%)
Query: 58 VYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + G S G + V D G G S Y +E+ +
Sbjct: 26 VVLVGGALSTRAGGAPL---AERLAPHFTVICYDRRGRGDSGDTPPY--AVEREIEDLAA 80
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
AF+FG S G ++L P T +F P V
Sbjct: 81 IIDAA-------GGAAFVFGMSSGAGLSLLAAASGLPIT-RLAVFEPPYAVDDSRPPVPP 132
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236
+ L A+ M P+ + + P + T+ V
Sbjct: 133 DYQTRLDALLAEGRRGDAVTYF-MTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAV 191
Query: 237 C---QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
F+ +++P L + G A +++ L
Sbjct: 192 MGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQEL 228
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 7e-08
Identities = 36/222 (16%), Positives = 62/222 (27%), Gaps = 20/222 (9%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ HG+ SD + I T Y V DL GHG + + +
Sbjct: 18 VLVFLHGFLSD-SRTYHNH-IEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDR 75
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENMKP 174
+ LFG SMGG + + LI ++P N
Sbjct: 76 ILDKYKDK------SITLFGYSMGGRVALYYAING-HIPISNLILESTSPGIKEEANQLE 128
Query: 175 SKLH------LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVG 228
+L + + + W +P + E I +
Sbjct: 129 RRLVDDARAKVLDIAGIELFVNDWEKLPL--FQSQLELPVEIQHQIRQQRLSQSPHKMAK 186
Query: 229 TMREIARVCQ-YIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
+R+ + ++ VP L + G D + K+
Sbjct: 187 ALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKM 228
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 1e-07
Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 21/215 (9%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
T+ + HG +++ A GY V A D +G +S Y +++AA++ +
Sbjct: 48 TILLMHGKNFC-AGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHA 106
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGA---ATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173
+ + + A + G SMGG L+Y P L+ P+ +
Sbjct: 107 LLERLGVA------RASVIGHSMGGMLATRYALLY----PRQVERLVLVNPIGLEDWKAL 156
Query: 174 PSKLHLFMYGLLFGLADTWAAMPD----NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGT 229
L + + G+ + ++ + + R G+ V
Sbjct: 157 GVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAW 216
Query: 230 MREIARVCQYIQD---NFSKVTVPFLTVHGTADGV 261
+ + Q ++ +P L + G D
Sbjct: 217 NSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNT 251
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 3e-07
Identities = 29/212 (13%), Positives = 50/212 (23%), Gaps = 30/212 (14%)
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSLSFFKH 120
G+ D +++ + I + V + GHG S + + ++ +L
Sbjct: 34 PGWCHD-HRVYKYL-IQELDADFRVIVPNWRGHGLSPSEVPDF--GYQEQVKDALEILDQ 89
Query: 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180
+ S GG + + Q+ P I L P+ L L
Sbjct: 90 LGVE------TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLL 143
Query: 181 -----MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
GL D W D + + Y + R I
Sbjct: 144 KDPERWREGTHGLFDVWLDGHD---------EKRVRHHLLEEMADYGYDCWGRSGRVIED 194
Query: 236 VCQYIQD-----NFSKVTVPFLTVHGTADGVT 262
T P +
Sbjct: 195 AYGRNGSPMQMMANLTKTRPIRHIFSQPTEPE 226
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 3e-07
Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 17/187 (9%)
Query: 25 SQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMFQKICISYATWG 83
+ V + + LF + LP + + +V + HG W A G
Sbjct: 2 AASVEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAG 61
Query: 84 YAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGA 142
Y A DL G G S + + + P + S+ G
Sbjct: 62 YRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELG------PPVVISPSLSGM 115
Query: 143 ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW--------AA 194
++ + G + AP+ N +++G D
Sbjct: 116 YSLPFLTAP-GSQLPGFVPVAPICTDKINAANYASVKTPALIVYGDQDPMGQTSFEHLKQ 174
Query: 195 MPDNKMV 201
+P+++++
Sbjct: 175 LPNHRVL 181
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-07
Identities = 46/270 (17%), Positives = 87/270 (32%), Gaps = 29/270 (10%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
V HG+ + G +Q + GY A D GHG S Y D + A
Sbjct: 21 PVVFIHGWPLN-GDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGY--DFDTFADDLN 77
Query: 116 SFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVI--- 168
+ DL L SMGG + + P+ +
Sbjct: 78 DLLTDL-------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDK 130
Query: 169 -PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
P+ + G+L + W + + + +
Sbjct: 131 NPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIE 190
Query: 228 GTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCP-TSSKLLYEKASSADKSIKIYD 285
G +R + ++ K +P L VHG D V + + + +A +K+Y+
Sbjct: 191 GGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNA--ELKVYE 248
Query: 286 GMYHS--LIQGEPDENANLVLKDMREWIDE 313
G H ++ G+ ++ +D+ E++++
Sbjct: 249 GSSHGIAMVPGDKEK----FNRDLLEFLNK 274
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 4e-07
Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 5/111 (4%)
Query: 55 KATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGI---RCYLGDMEKV 110
V HG GS + + G A DLL + R D+ +
Sbjct: 35 TGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLL 94
Query: 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF 161
A+ + + H+ + L FG S GG A L+ P T ++
Sbjct: 95 ASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAA-LVAAAERPETVQAVVS 144
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 54/267 (20%), Positives = 84/267 (31%), Gaps = 26/267 (9%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
+ +HG+ + ++ I A GY V A D GHGRS DM+ A
Sbjct: 21 PIVFSHGWPLN-ADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGN--DMDTYADDLA 77
Query: 116 SFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVI--- 168
+H+ DL A LFG S GG + PL +
Sbjct: 78 QLIEHL-------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEA 130
Query: 169 -PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGK-PR 226
P + L + + + G + +
Sbjct: 131 NPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH 190
Query: 227 VGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
I + ++ K+ VP L VHG AD V P + + A ++KIY
Sbjct: 191 KNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQV-VPIEASGIASAALVKGSTLKIYS 249
Query: 286 GMYHSLIQGEPDENANLVLKDMREWID 312
G H L D + + + D+ +I
Sbjct: 250 GAPHGL----TDTHKDQLNADLLAFIK 272
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 52/276 (18%), Positives = 85/276 (30%), Gaps = 45/276 (16%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASS 114
V + HG G+ + I Y V A D+LG G++ Y ++
Sbjct: 38 PVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEY--TQDRRIRHL 95
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP---LFVIPEN 171
F K + D + G SMGGA + + L+ + I E+
Sbjct: 96 HDFIKAMNF-----DGKVSIVGNSMGGATGLGVSVL-HSELVNALVLMGSAGLVVEIHED 149
Query: 172 MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL--KVIASNPRRYTGKPRVGT 229
++P + T M +V D K+ +I RYT T
Sbjct: 150 LRP----------IINYDFTREGMV--HLVKALTNDGFKIDDAMIN---SRYTYATDEAT 194
Query: 230 MREIARVCQYIQDNF---------SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280
+ Q+I++ KV VP L V G D V ++ + +
Sbjct: 195 RKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSW-- 252
Query: 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316
I H E+ ++ RV+
Sbjct: 253 GYIIPHCGHWA----MIEHPEDFANATLSFLSLRVD 284
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 38/211 (18%), Positives = 61/211 (28%), Gaps = 20/211 (9%)
Query: 62 HGYGSD-TGWM-FQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
HG G TGW F + GY V D G G+SD + + A S
Sbjct: 43 HGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVD 102
Query: 120 HVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178
+ D+ L G SMGG +++ + P L+ P
Sbjct: 103 QL-------DIAKIHLLGNSMGGHSSVAFTLKW-PERVGKLVLMGGGTGGMSLFTPMPTE 154
Query: 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-------KVIASNPRRYTGKPRVGTMR 231
T + M+ + D L ++ RR + V ++
Sbjct: 155 GIKRLNQLYRQPTIENLK--LMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLE 212
Query: 232 EIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ +++ L V G D
Sbjct: 213 ANPKQFPDFGPRLAEIKAQTLIVWGRNDRFV 243
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 38/266 (14%), Positives = 78/266 (29%), Gaps = 31/266 (11%)
Query: 60 MTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG-DMEKVAASSLSF 117
+TH Y + T Y+V+ +L G G SD + M + +
Sbjct: 28 VTHLYSEYNDNGNTF---ANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAI 84
Query: 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
+ + ++ G S GG ++ Y + T +I +
Sbjct: 85 REALYINK------WGFAGHSAGGMLALV-YATEAQESLTKIIVGGAAASKEYASHKDSI 137
Query: 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIK------------DPEKLK-VIASNPRRYTGK 224
+ + A+ D+ V + K EKL+ + T
Sbjct: 138 YCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVG 197
Query: 225 PRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284
R+ R++ ++ V +P G D S + +A + +
Sbjct: 198 NRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNAT--LTKF 255
Query: 285 DGMYHSLIQGEPDENANLVLKDMREW 310
+ H+ E D+ + + +
Sbjct: 256 EESNHNPFVEEIDK----FNQFVNDT 277
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 33/220 (15%), Positives = 62/220 (28%), Gaps = 18/220 (8%)
Query: 62 HGYGSD-TGW-MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
HG G GW + + + GY V D G +SD + A +
Sbjct: 40 HGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMD 99
Query: 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179
+ A L G +MGGA + + P+ LI P + P P +
Sbjct: 100 ALDIDR------AHLVGNAMGGATALNFALEY-PDRIGKLILMGPGGLGPSMFAPMPMEG 152
Query: 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-------KVIASNPRRYTGKPRVGTMRE 232
++ + +M+ + D + + A + K + + ++
Sbjct: 153 IKLLFKLYAEPSYETL--KQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQK 210
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272
+ ++ G D L
Sbjct: 211 APLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLW 250
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 44/269 (16%), Positives = 82/269 (30%), Gaps = 28/269 (10%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
V + HG+ G ++ + GY V D G G+S Y + + +
Sbjct: 29 PVVLIHGWPLS-GRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGY--EYDTFTSDLH 85
Query: 116 SFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVIPEN 171
+ + +L L G SMGG + ++F P E+
Sbjct: 86 QLLEQL-------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSED 138
Query: 172 -----MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ + + F G++ D N G
Sbjct: 139 HPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASP 198
Query: 227 VGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCP-TSSKLLYEKASSADKSIKIY 284
GT+ I + + + K +P L +HG +D S KL +E ++ + +
Sbjct: 199 KGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNS--KVALI 256
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313
G H L E + + ++ +
Sbjct: 257 KGGPHGLNATHAKE----FNEALLLFLKD 281
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 43/279 (15%), Positives = 74/279 (26%), Gaps = 43/279 (15%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD----GIRCY-LGDMEKVA 111
+ + G + A G V D GRS Y G++ A
Sbjct: 25 ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL---A 81
Query: 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP---------NTWTGLIFS 162
A +++ A + G SMG T ++ I
Sbjct: 82 ADAVAVLDGWGVD------RAHVVGLSMGATITQVIALD-HHDRLSSLTMLLGGGLDIDF 134
Query: 163 APLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRY- 221
+P+ L F A P + K K ++++ +
Sbjct: 135 DANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFD 194
Query: 222 TGKPRVGTMREIARVCQYIQDNF----------------SKVTVPFLTVHGTADGVTCPT 265
+ R I + + + +VTVP L + D +
Sbjct: 195 DAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAP 254
Query: 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304
K L +A + GM H+L A ++L
Sbjct: 255 HGKHLAGLIPTAR--LAEIPGMGHALPSSVHGPLAEVIL 291
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 38/223 (17%), Positives = 62/223 (27%), Gaps = 33/223 (14%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
TV + HG G W I+ + V A D G+G SD + A +
Sbjct: 38 TVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALK 97
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
F + L G ++GG + P L+ P + P
Sbjct: 98 GLFDQLGLG------RVPLVGNALGGGTAVRFALDY-PARAGRLVLMGPGGLSINLFAPD 150
Query: 176 KLHLFMYGLLFGLADTWAAM--------PDNKMVGKAI--------KDPEKLKVIASNPR 219
F +A T + D ++ + PE L + +
Sbjct: 151 PTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGK 210
Query: 220 RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ G M + ++ P L + G D V
Sbjct: 211 SFAGADFEAGM---------MWREVYRLRQPVLLIWGREDRVN 244
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 6e-06
Identities = 35/258 (13%), Positives = 72/258 (27%), Gaps = 23/258 (8%)
Query: 62 HGYGSDTGWMFQ-KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
G G G + ++ GY D G G ++ + + + A + + +
Sbjct: 50 AGRGGA-GRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGF--TTQTMVADTAALIET 106
Query: 121 VRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENMKP-SK 176
+ D+ PA + G SMG + P + + + ++
Sbjct: 107 L-------DIAPARVVGVSMGAFIAQELMVV-APELVSSAVLMATRGRLDRARQFFNKAE 158
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236
L+ G+ A K + D + + + K G ++
Sbjct: 159 AELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA 218
Query: 237 CQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295
Q + + P L + D VT P + + + + H
Sbjct: 219 PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNG--RYLQIPDAGHLG---- 272
Query: 296 PDENANLVLKDMREWIDE 313
E V M ++
Sbjct: 273 FFERPEAVNTAMLKFFAS 290
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 6e-06
Identities = 39/307 (12%), Positives = 70/307 (22%), Gaps = 27/307 (8%)
Query: 5 TQPETPPNYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQKVK--ATVYMT 61
T ++ + S V + K F G L +LP ++ + +
Sbjct: 43 TGGTNMQLQLTQEWDKTFPLSAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIG 102
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
+G+ + A G+ A D G S G + + + +
Sbjct: 103 GPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFI 162
Query: 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSE------PNTWTGLIFSAPLFVIPENMKPS 175
+ G G + + +T +
Sbjct: 163 SLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYNDSVTLEQ 222
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVG------- 228
+ D + P + + Y PR
Sbjct: 223 RTRTLEQLGQQRWKDAESGTP--AYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNS 280
Query: 229 ----TMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK 282
TM + K P L +HG S+ Y A + K +
Sbjct: 281 GNAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAHS--RYFSETAYAAA-AEPKELL 337
Query: 283 IYDGMYH 289
I G H
Sbjct: 338 IVPGASH 344
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 8e-06
Identities = 22/91 (24%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG G +Q + A A DL GHG + C + +
Sbjct: 18 LVVLVHGLLGS-GADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD--NFAEAVEMIEQ 74
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLM 147
+ SE P L G S+GG M
Sbjct: 75 TVQAHVTSEV----PVILVGYSLGGRLIMHG 101
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 9e-06
Identities = 15/116 (12%), Positives = 28/116 (24%), Gaps = 16/116 (13%)
Query: 55 KATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGI---RCYLGDMEKV 110
+ + HG+ S + G+ D + G ++++
Sbjct: 4 RGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRL 63
Query: 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
R + P L G S+G + S L P
Sbjct: 64 LE-------IARAATEKG--PVVLAGSSLGSYIAAQV---SLQVPTRALFLMVPPT 107
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 9e-06
Identities = 51/273 (18%), Positives = 88/273 (32%), Gaps = 34/273 (12%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG-DMEKVAASSL 115
V + HGY D G +++ GY V D G G S + G D + AA
Sbjct: 25 PVVLIHGYPLD-GHSWERQTRELLAQGYRVITYDRRGFGGSS--KVNTGYDYDTFAADLH 81
Query: 116 SFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENM 172
+ + + DL L G SMG + L F S F++ +
Sbjct: 82 TVLETL-------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDD 134
Query: 173 KPSKLHLFMY-GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR 231
P + ++ G+ A + D I+ + V
Sbjct: 135 NPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGS--WNVAIGS 192
Query: 232 ----EIARVCQYIQD------NFSKVTVPFLTVHGTADGVT-CPTSSKLLYEKASSADKS 280
A V +I+D P L +HGT D + +++ ++ AD
Sbjct: 193 APVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEAD-- 250
Query: 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
+G H L +A+ V ++ ++ +
Sbjct: 251 YVEVEGAPHGL----LWTHADEVNAALKTFLAK 279
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 42/226 (18%), Positives = 70/226 (30%), Gaps = 51/226 (22%)
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI-RCY-LGDMEKVAASSLSFFK 119
GS F + + V A D G+G S R + E+ A ++ K
Sbjct: 31 GMLGSGE-TDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMK 89
Query: 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH- 178
++ L G S GG T LI +A PS +H
Sbjct: 90 ALKFK------KVSLLGWSDGGI--------------TALIAAA--------KYPSYIHK 121
Query: 179 LFMYGLLFGLADTWAAMPD-NKMVGKAIKDPEKL------KVIASNPRRYTGKPRVGTMR 231
+ + A + D + M+ + I+D K + A Y + +
Sbjct: 122 MV-------IWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVD 174
Query: 232 EIARVCQYIQDNF-----SKVTVPFLTVHGTADGVTCPTSSKLLYE 272
I + N +V P L VHG D + + +++
Sbjct: 175 GIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHK 220
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 37/267 (13%), Positives = 81/267 (30%), Gaps = 31/267 (11%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
V + HG G + + ++ I + Y V A D++G G +D Y + +
Sbjct: 27 PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHII 86
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
+ A + G + GG + + ++ + +
Sbjct: 87 GIMDALEIE------KAHIVGNAFGGGLAIATALR-YSERVDRMVLMGAAGTRFDVTEGL 139
Query: 176 KLHLFMYGLLFGLADTWAAMPDNK---------MVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ + + ++ + +A P + +S PR
Sbjct: 140 NAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPE----PR 195
Query: 227 VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286
+ +A ++ + L +HG D V +SS L E A + ++
Sbjct: 196 QRWIDALASS----DEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQ--LHVFGR 249
Query: 287 MYHSLIQGEPDENANLVLKDMREWIDE 313
H E + + + E+ +E
Sbjct: 250 CGHWT----QIEQTDRFNRLVVEFFNE 272
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 52/267 (19%), Positives = 84/267 (31%), Gaps = 30/267 (11%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
V +HG+ D M++ ++ GY A D G GRSD D + A
Sbjct: 21 PVLFSHGWLLD-ADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGN--DYDTFADDIA 77
Query: 116 SFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVI--- 168
+H+ DL L G SMGG + GL+ PLF
Sbjct: 78 QLIEHL-------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPD 130
Query: 169 -PENMKPSKLHLFMYGLLFGLADTWAAMPD---NKMVGKAIKDPEKLKVIASNPRRYTGK 224
P+ + F LL A + G+ + + K
Sbjct: 131 YPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVV-SQGVQTQTLQIALLASLK 189
Query: 225 PRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284
V + A + +K+ VP L +HG D + P + +K+Y
Sbjct: 190 ATVDCVTAFAETDFR--PDMAKIDVPTLVIHGDGDQI-VPFETTGKVAAELIKGAELKVY 246
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWI 311
H +A + +D+ ++
Sbjct: 247 KDAPHGF----AVTHAQQLNEDLLAFL 269
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 21/112 (18%), Positives = 33/112 (29%), Gaps = 19/112 (16%)
Query: 57 TVYMTHGYGSDTGWMFQKICIS-YATWGYAVFAADLLGHGRSD-------GIRCYLGDME 108
+ + HG G + + + + + A DL HG + D+
Sbjct: 40 VLLLLHGGGH-SALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVG 98
Query: 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLI 160
V V P L G SMGGA + + + GL
Sbjct: 99 NV----------VEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLC 140
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 2e-05
Identities = 46/284 (16%), Positives = 77/284 (27%), Gaps = 50/284 (17%)
Query: 47 FLPLDQKVKA-TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105
+P ++ K V GY G+ + + + GY F D G G
Sbjct: 86 LVPKLEEEKLPCVVQYIGYNGGRGFPHDWL--FWPSMGYICFVMDTRGQGSGWLKGDTPD 143
Query: 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165
E F R R + + A + S P
Sbjct: 144 YPEGPVDPQYPGF-MTRGILDPRT---YYYRRVFTDAVRAVEAAASFP------------ 187
Query: 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKP 225
V E + + G G A +K + D + RR
Sbjct: 188 QVDQER-------IVIAGGSQGGGIALAVSALSKKAKALLCDV----PFLCHFRRAVQLV 236
Query: 226 RVGTMREIARVCQYIQD---------------NF-SKVTVPFLTVHGTADGVTCPTSSKL 269
EI + +D NF ++ +P L G D + P++
Sbjct: 237 DTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFA 296
Query: 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
Y + K I+IY H A +K +++ ++
Sbjct: 297 AYNYY-AGPKEIRIYPYNNHEGG---GSFQAVEQVKFLKKLFEK 336
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 5e-05
Identities = 43/267 (16%), Positives = 82/267 (30%), Gaps = 26/267 (9%)
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSLSFFKH 120
HG+ G +++ + GY V D G G+S Y D + AA + +
Sbjct: 31 HGFPLS-GHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY--DYDTFAADLNTVLET 87
Query: 121 VRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFV-IPENMKPS 175
+ DL A L G SMG + F P + +N +
Sbjct: 88 L-------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGA 140
Query: 176 KLHLFMYGLLFGLADTWAAMPDN---KMVGKAIKDPEKLK--VIASNPRRYTGKPRVGTM 230
F G++ + A ++ + ++
Sbjct: 141 APQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAA 200
Query: 231 REIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290
+ + ++ VP L +HGT D ++ ++ KA +G H
Sbjct: 201 AAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKA-LPSAEYVEVEGAPHG 259
Query: 291 LIQGEPDENANLVLKDMREWIDERVER 317
L+ +E V + ++ + +E
Sbjct: 260 LLWTHAEE----VNTALLAFLAKALEA 282
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 6e-05
Identities = 48/274 (17%), Positives = 77/274 (28%), Gaps = 40/274 (14%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD---GIRCYLGDMEKVA 111
+ T HG S ++++K+ + G V A DL G GRSD Y
Sbjct: 46 EHTFLCLHGEPS-WSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY--TFGFHR 102
Query: 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF-SAPLFVIPE 170
S L+F ++ L + GG L P LI + L V
Sbjct: 103 RSLLAFLDALQLE------RVTLVCQDWGGI-LGLTLPVDRPQLVDRLIVMNTALAVGLS 155
Query: 171 NMKPSKLH-------------LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASN 217
K + M + G+ D A D PE +
Sbjct: 156 PGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYD-----APFPGPEFKAGVRRF 210
Query: 218 PRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277
P P M Q + ++ + P G D V P +L +
Sbjct: 211 PAIV---PITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGC 267
Query: 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
+ + + G H + + + +
Sbjct: 268 PEPMIVEAGG-HFVQEHGEPIARAA----LAAFG 296
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 1e-04
Identities = 47/263 (17%), Positives = 90/263 (34%), Gaps = 27/263 (10%)
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD---GIRCYLGDMEKVAASSLSFF 118
G+G D ++ + + V D +G G SD ++ A L
Sbjct: 27 PGFGCD-QSVWNAV-APAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVC 84
Query: 119 KHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVIPENMKP 174
+ + DL G S+G ML P ++ L+ S P
Sbjct: 85 EAL-------DLKETVFVGHSVGALIGMLAS-IRRPELFSHLVMVGPSPCYLNDPPEYYG 136
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ GLL + + + P++ ++ R+ V R+ A
Sbjct: 137 GFEEEQLLGLLEMMEKNYIGWATV-FAATVLNQPDRPEIKEELESRFCSTDPVIA-RQFA 194
Query: 235 RVCQY--IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ + +++ SKVTVP L + D + T K +++ + S+K + H
Sbjct: 195 KAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYS--SLKQMEARGHCPH 252
Query: 293 QGEPDENANLVLKDMREWIDERV 315
PDE ++ + +++ V
Sbjct: 253 MSHPDE----TIQLIGDYLKAHV 271
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 2e-04
Identities = 34/271 (12%), Positives = 69/271 (25%), Gaps = 60/271 (22%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGW-MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105
+ P + V + HG + +++ G + A D GH G
Sbjct: 48 WSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGH----------G 97
Query: 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165
+ V A + P + A L + ++E
Sbjct: 98 ERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEG----------- 146
Query: 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKP 225
P + GL G D +
Sbjct: 147 --------PRPTGWW--GLSMGTMMGLPV---------TASDKRIKVALLGLM--GVEGV 185
Query: 226 RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
+ +A +VT P + D + S L+ K + K++ +
Sbjct: 186 NGEDLVRLAP----------QVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNP 235
Query: 286 GMYHSLIQGEPDENANLVLKDMREWIDERVE 316
G + ++ E +++D+R++
Sbjct: 236 GKHSAVPTWEMF-------AGTVDYLDQRLK 259
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 22/99 (22%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD--------GIRCYLGDME 108
V HG + G +Q++ + A GY V A DL GHGRS +L ++
Sbjct: 28 VVLCIHGIL-EQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQID 86
Query: 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLM 147
+V D P L G SMG +
Sbjct: 87 RVIQE-------------LPDQPLLLVGHSMGAMLATAI 112
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 Length = 273 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 2e-04
Identities = 34/304 (11%), Positives = 78/304 (25%), Gaps = 57/304 (18%)
Query: 22 YYTSQGVRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYAT 81
++ + T +F + Q + V HG G W
Sbjct: 8 HHHHHMSNTVRAISPDITLFNKTLTFQEISQNTREAVIYIHG-G---AWNDP----ENTP 59
Query: 82 WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA--------- 132
+ A + + + + + D +
Sbjct: 60 NDFNQLANTIKSMDTESTVC--------QYSIEYRLSPEITNPRNLYDAVSNITRLVKEK 111
Query: 133 -----FLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186
+ G S+G ++ +P S + ++ K + G+ +
Sbjct: 112 GLTNINMVGHSVGATFIWQILAALKDPQEK----MSEAQLQMLGLLQIVKRVFLLDGI-Y 166
Query: 187 GLADTWAAMPDNK-MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS 245
L + P+ A D ++ +RV Y++ S
Sbjct: 167 SLKELLIEYPEYDCFTRLAFPDGIQMYEEEP-----------------SRVMPYVKKALS 209
Query: 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK--IYDGMYHSLIQGEPDENANLV 303
+ ++ VH +D + + L S K + D H+ + + A +
Sbjct: 210 RFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNG-KVAKYI 268
Query: 304 LKDM 307
++
Sbjct: 269 FDNI 272
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 21/99 (21%), Positives = 30/99 (30%), Gaps = 23/99 (23%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD--------GIRCYLGDME 108
V G F+ + A + V ++ G G SD YL D+E
Sbjct: 31 PVLCLPGLT-RNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLE 88
Query: 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLM 147
+ A G S+GG TML+
Sbjct: 89 ALLA-------QEGIE------RFVAIGTSLGGLLTMLL 114
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 Length = 763 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 2e-04
Identities = 33/277 (11%), Positives = 66/277 (23%), Gaps = 35/277 (12%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL- 115
+ Y GW + + + T G+A +G SDG + + + +++
Sbjct: 256 PIVDKAPYRFTHGWTYS-LNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVI 314
Query: 116 -----------SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164
S K + + + G+S G
Sbjct: 315 DWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEG---------- 364
Query: 165 LFVIPENMKPSKLHLFMYG----LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR 220
L +I S + + G + D + +
Sbjct: 365 LELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEK 424
Query: 221 YTGKPRVGTMREIARVCQYIQD-----NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275
+ R+ Q+ D N KV L VHG D P + ++
Sbjct: 425 RLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALP 484
Query: 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
H + + + + +
Sbjct: 485 EGHAKHAFLHRGAHIYMNSWQSID---FSETINAYFV 518
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 35/277 (12%), Positives = 78/277 (28%), Gaps = 41/277 (14%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-----GIRCYLGDMEKVA 111
TV + HG+G D M++ + + V D +G G+SD R +E A
Sbjct: 30 TVLLAHGFGCD-QNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYS--SLEGYA 85
Query: 112 ASSLSFFKHVRHSEPYRDL-PAFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFV 167
+ DL + G S+ + + + + S
Sbjct: 86 KDVEEILVAL-------DLVNVSIIGHSVSSIIAGIASTH-VGDRISDITMICPSPCFMN 137
Query: 168 IPEN----MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTG 223
P + + L + + + ++G + E + ++ +
Sbjct: 138 FPPDYVGGFERDDLEELINLMDKNYIGWANYLAPL-VMGASH-SSELIGELSGSFCTTDP 195
Query: 224 KPRVGTMREIARVCQYIQDNF---SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280
+ D ++ P L D + P + + E ++
Sbjct: 196 IVAKTFAKATFFS-----DYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNS--Q 248
Query: 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
+++ H L + + + +I R
Sbjct: 249 LELIQAEGHCLHMTDAGL----ITPLLIHFIQNNQTR 281
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 3e-04
Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 10/160 (6%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
A + H W++ K+ G+ V A DL G +G ++ +
Sbjct: 3 FAHFVLIHTICHG-AWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPL 61
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
L+F + + E L GES GG + + +F + P
Sbjct: 62 LTFLEALPPGEKV-----ILVGESCGGLNIAIAADKYCEKI-AAAVFHNS-VLPDTEHCP 114
Query: 175 SKLHLFMYGLLFGLADTWAAM--PDNKMVGKAIKDPEKLK 212
S + + + DT D K + L+
Sbjct: 115 SYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLR 154
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 12/108 (11%)
Query: 41 KLFTQSFLPLDQKVKATVYMTHG-YGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG 99
KL ++ +Q + + + HG +GS + + + D+ HG S
Sbjct: 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNL--GVLARDLVN-DHNIIQVDVRNHGLSPR 58
Query: 100 IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLM 147
+ +A + ++ A G SMGG A M +
Sbjct: 59 EPVM--NYPAMAQDLVDTLDALQID------KATFIGHSMGGKAVMAL 98
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 21/147 (14%), Positives = 39/147 (26%), Gaps = 15/147 (10%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
T+++ G+ +F+ + + V D GH + D + +A L
Sbjct: 23 TLFLLSGWC-QDHRLFKNL-APLLARDFHVICPDWRGHDAKQTDSGDF--DSQTLAQDLL 78
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF----SAPLFVIPEN 171
+F + S G + + Q I P +
Sbjct: 79 AFIDAKGIR------DFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQ 132
Query: 172 MKPSKLHLFMYGLLFGLADTWAAMPDN 198
+ + D WA DN
Sbjct: 133 LAEGQHPTEYVAGRQSFFDEWAETTDN 159
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 39/265 (14%), Positives = 72/265 (27%), Gaps = 40/265 (15%)
Query: 62 HGYGSDTGWMFQKICISYATW---GYAVFAADLLGHGRSD------GIRCYLGDMEKVAA 112
HG +F+ + + A D GHG SD Y D+ +
Sbjct: 75 HGIT-SNSAVFEPL----MIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIR 129
Query: 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172
+ A L G S+G ++ + P+ ++ I
Sbjct: 130 -------TLARG------HAILVGHSLGARNSVTAAAK-YPDLVRSVVAIDFTPYIET-E 174
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
L + D A I S + G R
Sbjct: 175 ALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSA 234
Query: 233 -IARVCQYIQDNF----SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287
+A+ + ++ + VT P L V G + + + + + G
Sbjct: 235 AMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDL--PVVVVPGA 292
Query: 288 YHSLIQGEPDENANLVLKDMREWID 312
H + + + + LK + +ID
Sbjct: 293 DHYV----NEVSPEITLKAITNFID 313
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 4e-04
Identities = 41/276 (14%), Positives = 76/276 (27%), Gaps = 34/276 (12%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMF------QKICISYATWGYAVFAAD--LLGHGRSD 98
+Q K + HG G G MF I T Y + LL D
Sbjct: 21 IKAKNQPTKGVIVYIHG-G---GLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLD 76
Query: 99 GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTG 158
I + D+ A+ F ++ Y + P F FG S G ++L+ + + G
Sbjct: 77 CI---IEDVY--AS-----FDAIQ--SQYSNCPIFTFGRSSGAYLSLLIARDRDID---G 121
Query: 159 LIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNP 218
+I I + + A + V + + +I
Sbjct: 122 VIDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQD--QIAQRFLIYVYA 179
Query: 219 RRYTGKPR-VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277
R + D P H D S+ + +
Sbjct: 180 RGTGKWINMINIADYTDSKYNIAPDELKT-LPPVFIAHCNGDYDVPVEESEHIMNHVPHS 238
Query: 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
+ + H + DE + + + ++++
Sbjct: 239 T--FERVNKNEHDFDRRPNDEAIT-IYRKVVDFLNA 271
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 38.9 bits (90), Expect = 5e-04
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 19/96 (19%)
Query: 58 VYMTHGYGSDTGWMFQKICISYATW------GYAVFAADLLGHGRSDGIRCYLGDMEKVA 111
V+ G G + + W GYA + DL G+GR++G R E++A
Sbjct: 15 VFDRVGKGPPV----LLVAEEASRWPEALPEGYAFYLLDLPGYGRTEGPRM---APEELA 67
Query: 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLM 147
F + P+ + +G A +
Sbjct: 68 HFVAGFAVMMNLGAPW------VLLRGLGLALGPHL 97
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 33/216 (15%), Positives = 57/216 (26%), Gaps = 20/216 (9%)
Query: 62 HGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
HG T W I+ + Y +A D++G G A L F +
Sbjct: 74 HGALFSSTMWYPN---IADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDN 130
Query: 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180
+ + + G S+GG TM + P +P
Sbjct: 131 LGIE------KSHMIGLSLGGLHTMNFLLR-MPERVKSAAILSP-AETFLPFHHDFYKYA 182
Query: 181 MYGLLFGLADTWAAM--PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ 238
+ +T+ D ++ K V+ + R G
Sbjct: 183 LGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTD--- 239
Query: 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274
+ VP L + G + + P S+
Sbjct: 240 ---EELRSARVPILLLLGEHEVIYDPHSALHRASSF 272
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 6e-04
Identities = 42/282 (14%), Positives = 77/282 (27%), Gaps = 61/282 (21%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRS--------- 97
P + + HGY S++G K+ +Y G+ V A D+ G G
Sbjct: 100 IKPKTEGKHPALIRFHGYSSNSGDWNDKL--NYVAAGFTVVAMDVRGQGGQSQDVGGVTG 157
Query: 98 --------DGI-----RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAAT 144
G+ + A ++ + R + G S GG +
Sbjct: 158 NTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDR---VGVMGPSQGGGLS 214
Query: 145 MLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204
+ + V+ E S L A +
Sbjct: 215 L----------ACAALEPRVRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRH 264
Query: 205 IKDPEKLKVIAS-NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263
++ E + + + A+ ++ L G D V
Sbjct: 265 ERENEVFTKLGYIDVKNL------------AK----------RIKGDVLMCVGLMDQVCP 302
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLK 305
P++ Y + K IK+Y H ++G D +L+
Sbjct: 303 PSTVFAAYNNI-QSKKDIKVYPDYGHEPMRGFGDLAMQFMLE 343
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 Length = 249 | Back alignment and structure |
|---|
Score = 39.1 bits (90), Expect = 9e-04
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 9/123 (7%)
Query: 35 FETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW----GYAVFAAD 90
F P G+L + + P +K + H + G M +I G+ +
Sbjct: 28 FNGPAGRLEGR-YQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFN 86
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150
GRS G + AAS+L + S ++ G S G M + +
Sbjct: 87 FRSIGRSQGEFDHGAGELSDAASALDWV----QSLHPDSKSCWVAGYSFGAWIGMQLLMR 142
Query: 151 SEP 153
Sbjct: 143 RPE 145
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 323 | |||
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.98 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.98 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.98 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.98 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.97 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.97 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.97 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.97 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.97 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.96 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.96 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.96 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.96 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.96 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.96 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.96 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.96 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.96 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.96 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.96 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.96 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.96 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.95 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.95 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.95 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.95 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.95 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.95 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.95 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.95 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.95 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.95 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.95 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.95 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.95 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.94 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.94 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.94 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.94 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.94 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.94 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.94 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.94 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.94 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.94 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.94 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.94 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.94 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.94 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.94 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.94 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.94 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.94 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.94 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.93 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.93 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.93 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.93 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.93 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.93 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.93 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.93 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.92 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.92 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.92 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.92 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.92 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.92 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.92 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.92 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.91 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.91 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.91 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.91 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.91 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.9 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.9 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.9 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.9 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.9 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.9 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.89 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.89 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.89 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.89 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.89 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.88 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.88 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.88 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.87 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.87 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.86 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.86 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.86 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.86 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.85 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.84 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.84 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.83 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.83 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.83 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.83 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.82 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.82 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.79 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.79 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.79 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.77 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.77 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.76 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.74 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.73 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.73 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.72 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.72 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.71 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.7 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.7 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.66 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.6 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.54 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.53 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.52 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.45 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.43 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.39 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.31 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.3 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.22 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.15 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 99.0 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.99 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.99 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.95 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.95 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.94 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.89 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.89 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.86 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.81 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.72 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.7 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.7 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.7 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.66 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.66 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 98.64 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.51 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.38 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.32 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.3 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 98.28 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 98.22 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.97 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.76 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 97.5 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.47 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 97.42 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.17 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 97.12 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 97.09 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 97.08 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 97.08 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 97.0 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.96 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.94 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.92 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.87 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 95.41 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 95.37 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.01 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.53 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 91.74 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 89.61 | |
| 3pa8_A | 254 | Toxin B; CLAN CD cysteine protease, protease, toxi | 86.07 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 81.09 |
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=250.91 Aligned_cols=285 Identities=25% Similarity=0.440 Sum_probs=214.0
Q ss_pred cccCCcccee-EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC
Q 020630 24 TSQGVRNGKE-YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 24 ~~~~~~~~~~-~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~ 101 (323)
...++++++. .+.+.|| +|.|..+.|.+ .++|+|||+||++++.. .|..+++.|+++||+|+++|+||+|.|....
T Consensus 28 ~~~~~~~~~~~~~~~~dg~~l~~~~~~p~~-~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~ 105 (342)
T 3hju_A 28 TPQSIPYQDLPHLVNADGQYLFCRYWKPTG-TPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGER 105 (342)
T ss_dssp CTTSCBTTSSCEEECTTSCEEEEEEECCSS-CCSEEEEEECCTTCCGG-GGHHHHHHHHTTTEEEEEECCTTSTTSCSST
T ss_pred CCCCcccccCceEEccCCeEEEEEEeCCCC-CCCcEEEEECCCCcccc-hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcC
Confidence 3455667776 8899999 99999998875 66899999999998877 8999999999999999999999999998766
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHH
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~ 181 (323)
....+++++++|+.++++++..+.+ ..+++|+|||+||.+++.+|.++|++ |+++|+++|............. ...
T Consensus 106 ~~~~~~~~~~~d~~~~l~~l~~~~~--~~~v~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~-~~~ 181 (342)
T 3hju_A 106 MVVSDFHVFVRDVLQHVDSMQKDYP--GLPVFLLGHSMGGAIAILTAAERPGH-FAGMVLISPLVLANPESATTFK-VLA 181 (342)
T ss_dssp TCCSCTHHHHHHHHHHHHHHHHHST--TCCEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCCCSCCTTTTSHHH-HHH
T ss_pred CCcCcHHHHHHHHHHHHHHHHHhCC--CCcEEEEEeChHHHHHHHHHHhCccc-cceEEEECcccccchhhhhHHH-HHH
Confidence 5556899999999999999998754 56899999999999999999999998 9999999998765544332221 111
Q ss_pred hhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcc
Q 020630 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
......+.+....... .................+..........................+.++++|+|+++|++|.+
T Consensus 182 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~ 259 (342)
T 3hju_A 182 AKVLNLVLPNLSLGPI--DSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRL 259 (342)
T ss_dssp HHHHHHHCTTCBCCCC--CGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSS
T ss_pred HHHHHHhccccccCcc--cccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcc
Confidence 1111111111111110 01111223333344444444444444445555555555566677889999999999999999
Q ss_pred cCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++.+.++.+.+.+.++++++++++++||.+++++++ ...++.+.+.+||++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 260 CDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPE-VTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp SCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHH-HHHHHHHHHHHHHHHHHHC
T ss_pred cChHHHHHHHHHcCCCCceEEEECCCCchhhcCChH-HHHHHHHHHHHHHhcccCC
Confidence 999999999999855578999999999999987764 3556778899999998754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-38 Score=248.19 Aligned_cols=283 Identities=25% Similarity=0.449 Sum_probs=207.8
Q ss_pred CCcccee-EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 27 GVRNGKE-YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 27 ~~~~~~~-~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
++++++. .+.+.+| +|+|..+++.+ +++|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|.......
T Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 90 (303)
T 3pe6_A 13 SIPYQDLPHLVNADGQYLFCRYWAPTG-TPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVV 90 (303)
T ss_dssp SCBGGGSCEEECTTSCEEEEEEECCSS-CCSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCC
T ss_pred CcccCCCCeEecCCCeEEEEEEeccCC-CCCeEEEEECCCCchhh-HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCC
Confidence 4445555 7889999 99999999875 56899999999998877 8999999999999999999999999998766555
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+++++++|+.++++++..+.+ ..+++++|||+||.+++.+|.++|++ |+++|+++|............ .......
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~ 166 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDYP--GLPVFLLGHSMGGAIAILTAAERPGH-FAGMVLISPLVLANPESATTF-KVLAAKV 166 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHST--TCCEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCSSSBCHHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhccC--CceEEEEEeCHHHHHHHHHHHhCccc-ccEEEEECccccCchhccHHH-HHHHHHH
Confidence 6899999999999999988754 56899999999999999999999998 999999998765432211111 1111111
Q ss_pred ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
............. ..............+..+..........................+.++++|+++++|++|.+++.
T Consensus 167 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 244 (303)
T 3pe6_A 167 LNSVLPNLSSGPI--DSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 244 (303)
T ss_dssp HHTTCCSCCCCCC--CGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCH
T ss_pred HHHhcccccCCcc--chhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCCh
Confidence 1111111111110 01111223333344444444444444444555555555556677889999999999999999999
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.++.+.+.+..+++++++++++||.++.++|+ ...++.+.+.+||+++....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~-~~~~~~~~~~~~l~~~~~~~ 297 (303)
T 3pe6_A 245 KGAYLLMELAKSQDKTLKIYEGAYHVLHKELPE-VTNSVFHEINMWVSQRTATA 297 (303)
T ss_dssp HHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHH-HHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHhcccCCceEEEeCCCccceeccchH-HHHHHHHHHHHHHhccCCCC
Confidence 999999999854578999999999999987764 35667788999999887543
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=248.50 Aligned_cols=232 Identities=17% Similarity=0.239 Sum_probs=167.0
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
+++.|||+||++++.. .|..+++.|+++||+|+++|+||||.|+..... ++++++++|+.++++++... ..+++
T Consensus 50 ~~~~VlllHG~~~s~~-~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~-~~~~~~~~d~~~~~~~l~~~----~~~v~ 123 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAA-STASDWTADIVAAMRWLEER----CDVLF 123 (281)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHT-CCHHHHHHHHHHHHHHHHHH----CSEEE
T ss_pred CCceEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEECCCCCCCCCccccC-CCHHHHHHHHHHHHHHHHhC----CCeEE
Confidence 3667999999998876 899999999999999999999999999654322 37899999999999999776 44899
Q ss_pred EEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHH
Q 020630 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
|+||||||.+++.+|.++|++ |+++|++++........ ..............+.... ........
T Consensus 124 lvG~S~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~------- 188 (281)
T 4fbl_A 124 MTGLSMGGALTVWAAGQFPER-FAGIMPINAALRMESPD---LAALAFNPDAPAELPGIGS----DIKAEGVK------- 188 (281)
T ss_dssp EEEETHHHHHHHHHHHHSTTT-CSEEEEESCCSCCCCHH---HHHHHTCTTCCSEEECCCC----CCSSTTCC-------
T ss_pred EEEECcchHHHHHHHHhCchh-hhhhhcccchhcccchh---hHHHHHhHhhHHhhhcchh----hhhhHHHH-------
Confidence 999999999999999999999 99999999876543211 1111111110000000000 00000000
Q ss_pred hhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccc
Q 020630 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
..............+..........+.++++|+|+|+|++|.++|++.++.+++.+.++++++++++++||.+++
T Consensus 189 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~ 263 (281)
T 4fbl_A 189 -----ELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATL 263 (281)
T ss_dssp -----CCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGG
T ss_pred -----HhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCcc
Confidence 000000112233344444444566788999999999999999999999999999997677899999999999886
Q ss_pred cCCchhHHHHHHHHHHHHHHH
Q 020630 294 GEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 294 ~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+. ..+++.+.|.+||+++
T Consensus 264 e~---~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 264 DN---DKELILERSLAFIRKH 281 (281)
T ss_dssp ST---THHHHHHHHHHHHHTC
T ss_pred cc---CHHHHHHHHHHHHHhC
Confidence 43 2577899999999864
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=244.59 Aligned_cols=254 Identities=13% Similarity=0.123 Sum_probs=172.9
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
..++.+.|| +|+|..+++.+ +|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.+... ++++++
T Consensus 6 ~~~~~~~~g~~l~y~~~G~~~---~p~lvl~hG~~~~~~-~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-~~~~~~ 79 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGAAE---KPLLALSNSIGTTLH-MWDAQLPALTR-HFRVLRYDARGHGASSVPPGP-YTLARL 79 (266)
T ss_dssp CEEEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGGGGHHHHHT-TCEEEEECCTTSTTSCCCCSC-CCHHHH
T ss_pred ceEEeccCCcEEEEEecCCCC---CCEEEEeCCCccCHH-HHHHHHHHhhc-CcEEEEEcCCCCCCCCCCCCC-CCHHHH
Confidence 456788899 99999998754 789999999998877 89999999987 599999999999999866543 689999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc-ccc
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF-GLA 189 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 189 (323)
++|+.++++.++.+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+.. .+..... ...
T Consensus 80 a~dl~~~l~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~r-v~~lvl~~~~~~~~~~--~~~~~-~~~~~~~~~~~ 149 (266)
T 3om8_A 80 GEDVLELLDALEVR------RAHFLGLSLGGIVGQWLALHAPQR-IERLVLANTSAWLGPA--AQWDE-RIAAVLQAEDM 149 (266)
T ss_dssp HHHHHHHHHHTTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSBCCCS--HHHHH-HHHHHHHCSSS
T ss_pred HHHHHHHHHHhCCC------ceEEEEEChHHHHHHHHHHhChHh-hheeeEecCcccCCch--hHHHH-HHHHHHccccH
Confidence 99999999999755 899999999999999999999999 9999999876543321 11111 0100000 000
Q ss_pred cccccCCCccccccc--ccChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 190 DTWAAMPDNKMVGKA--IKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
..........++... ...+.....+..... . ............. .+..+.+.++++|+|+|+|++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~ 225 (266)
T 3om8_A 150 SETAAGFLGNWFPPALLERAEPVVERFRAMLM---A-TNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAAS 225 (266)
T ss_dssp HHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHH---T-SCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHH
T ss_pred HHHHHHHHHHhcChhhhhcChHHHHHHHHHHH---h-CCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHH
Confidence 000000000000000 000000000000000 0 0000111111111 1123457889999999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.++.+.+.+ +++++++++ +||++++++| +++++.|.+||.
T Consensus 226 ~~~~l~~~i--p~a~~~~i~-~gH~~~~e~p----~~~~~~i~~Fl~ 265 (266)
T 3om8_A 226 HGELIAASI--AGARLVTLP-AVHLSNVEFP----QAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHHHHS--TTCEEEEES-CCSCHHHHCH----HHHHHHHHHHHT
T ss_pred HHHHHHHhC--CCCEEEEeC-CCCCccccCH----HHHHHHHHHHhc
Confidence 999999999 889999998 7999996555 668899999984
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=243.51 Aligned_cols=252 Identities=12% Similarity=0.049 Sum_probs=168.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
.|+|..+++.. ..+|+|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+......++++++++|+.++++.
T Consensus 2 ~i~y~~~g~~~-~~~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 78 (268)
T 3v48_A 2 HMKLSLSPPPY-ADAPVVVLISGLGGSGS-YWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVA 78 (268)
T ss_dssp CSCCEECCCSS-TTCCEEEEECCTTCCGG-GGHHHHHHHHT-TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCC-CCCCEEEEeCCCCccHH-HHHHHHHHHhh-cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHH
Confidence 46777777643 45789999999999887 89999999976 59999999999999987655456999999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc-----cccccccc-
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF-----GLADTWAA- 194 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~- 194 (323)
+..+ +++|+||||||.+|+.+|.++|++ |+++|++++.......... ........+. .+......
T Consensus 79 l~~~------~~~lvGhS~GG~ia~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 79 AGIE------HYAVVGHALGALVGMQLALDYPAS-VTVLISVNGWLRINAHTRR--CFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp TTCC------SEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSBCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC------CeEEEEecHHHHHHHHHHHhChhh-ceEEEEeccccccchhhhH--HHHHHHHHHhccchhhhhhhhhhh
Confidence 8754 899999999999999999999999 9999999976543211100 0000000000 00000000
Q ss_pred CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCCCcccCchhHHHHHH
Q 020630 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
........... ......... ................... +....+.++++|+|+|+|++|.++|.+.++.+.+
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~ 224 (268)
T 3v48_A 150 LYPADWMAARA--PRLEAEDAL---ALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHA 224 (268)
T ss_dssp HSCHHHHHTTH--HHHHHHHHH---HHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred cCchhhhhccc--ccchhhHHH---HHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHH
Confidence 00000000000 000000000 0000000011111111111 1234577899999999999999999999999999
Q ss_pred HhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+ +++++++++++||++++++| +++++.|.+||.+..
T Consensus 225 ~~--p~~~~~~~~~~GH~~~~e~p----~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 225 AL--PDSQKMVMPYGGHACNVTDP----ETFNALLLNGLASLL 261 (268)
T ss_dssp HC--SSEEEEEESSCCTTHHHHCH----HHHHHHHHHHHHHHH
T ss_pred hC--CcCeEEEeCCCCcchhhcCH----HHHHHHHHHHHHHhc
Confidence 98 78999999999999996555 669999999998765
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=242.00 Aligned_cols=261 Identities=11% Similarity=0.070 Sum_probs=170.7
Q ss_pred CccceeEEecCC---C-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-
Q 020630 28 VRNGKEYFETPN---G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC- 102 (323)
Q Consensus 28 ~~~~~~~~~~~~---g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~- 102 (323)
.+.+..++...+ | +++|...++.+ ++|+|||+||++++.. .|..+++.|+++||+||++|+||||.|+.+..
T Consensus 18 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~--~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~ 94 (310)
T 1b6g_A 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSD--AEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE 94 (310)
T ss_dssp CCCCCEEEESCTTCTTCEEEEEEEECTT--CSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG
T ss_pred CCCCceEEEecCCccceEEEEEEeCCCC--CCCEEEEECCCCCchh-hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCc
Confidence 333445565555 3 89999988632 1578999999998876 89999999998899999999999999986542
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCC----------C
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN----------M 172 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~----------~ 172 (323)
..++++.+++|+.++++.++.+ +++|+||||||.+|+.+|.++|++ |+++|++++....... .
T Consensus 95 ~~y~~~~~a~dl~~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~r-v~~Lvl~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T 1b6g_A 95 EDYTFEFHRNFLLALIERLDLR------NITLVVQDWGGFLGLTLPMADPSR-FKRLIIMNAXLMTDPVTQPAFSAFVTQ 167 (310)
T ss_dssp GGCCHHHHHHHHHHHHHHHTCC------SEEEEECTHHHHHHTTSGGGSGGG-EEEEEEESCCCCCCTTTCTHHHHTTTS
T ss_pred CCcCHHHHHHHHHHHHHHcCCC------CEEEEEcChHHHHHHHHHHhChHh-heEEEEeccccccCCccccchhhhhhc
Confidence 3469999999999999999865 899999999999999999999999 9999999985421110 0
Q ss_pred -chh-HHHHHHhhcccccccccccCCCcccccc--cccChhhHHHhhcCCcccCCCCCchhHHHHH--------HhhHHH
Q 020630 173 -KPS-KLHLFMYGLLFGLADTWAAMPDNKMVGK--AIKDPEKLKVIASNPRRYTGKPRVGTMREIA--------RVCQYI 240 (323)
Q Consensus 173 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 240 (323)
... ......... .+... ....... ..........+.................... ......
T Consensus 168 ~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 1b6g_A 168 PADGFTAWKYDLVT----PSDLR---LDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEA 240 (310)
T ss_dssp STTTHHHHHHHHHS----CSSCC---HHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred cchHHHHHHHHhcc----Cchhh---hhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhH
Confidence 000 000000000 00000 0000000 0000111111110000000000000000000 001123
Q ss_pred HhcCC-cccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEe--cCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 241 QDNFS-KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY--DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 241 ~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.+. ++++|+|+|+|++|.+++ +.++.+.+.+ +++++.++ +++||++++ + ++++++.|.+||.+
T Consensus 241 ~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~i--p~~~~~~i~~~~~GH~~~~-~----p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 241 ISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKAL--INGCPEPLEIADAGHFVQE-F----GEQVAREALKHFAE 308 (310)
T ss_dssp HHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHH--STTCCCCEEETTCCSCGGG-G----HHHHHHHHHHHHHH
T ss_pred hhhhhccccCceEEEeccCcchhh-hHHHHHHHhc--ccccceeeecCCcccchhh-C----hHHHHHHHHHHHhc
Confidence 45566 899999999999999999 8888898888 77788777 999999994 4 47799999999974
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=240.00 Aligned_cols=260 Identities=16% Similarity=0.094 Sum_probs=165.4
Q ss_pred ceeEEecCC---C-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCC
Q 020630 31 GKEYFETPN---G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLG 105 (323)
Q Consensus 31 ~~~~~~~~~---g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~ 105 (323)
+..++...+ | +++|..+++.+ .+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. ..+
T Consensus 20 ~~~~~~~~g~~~g~~l~y~~~G~~~--~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~ 96 (297)
T 2xt0_A 20 APHYLEGLPGFEGLRMHYVDEGPRD--AEHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY 96 (297)
T ss_dssp CCEEECCCTTCTTCCEEEEEESCTT--CSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred ccEEEeccCCCCceEEEEEEccCCC--CCCeEEEECCCCCcce-eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccC
Confidence 444555555 4 89999988632 1578999999998876 89999999998899999999999999986543 346
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH-HHHHHhhc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK-LHLFMYGL 184 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~-~~~~~~~~ 184 (323)
+++++++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++............ ........
T Consensus 97 ~~~~~a~dl~~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 169 (297)
T 2xt0_A 97 TFGFHRRSLLAFLDALQLE------RVTLVCQDWGGILGLTLPVDRPQL-VDRLIVMNTALAVGLSPGKGFESWRDFVAN 169 (297)
T ss_dssp CHHHHHHHHHHHHHHHTCC------SEEEEECHHHHHHHTTHHHHCTTS-EEEEEEESCCCCSSSCSCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCCC------CEEEEEECchHHHHHHHHHhChHH-hcEEEEECCCCCcccCCchhHHHHHHHhhc
Confidence 8999999999999999854 899999999999999999999999 999999998542111101100 01111000
Q ss_pred cccccc-----ccccCCCccccc---ccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC-cccccEEEEe
Q 020630 185 LFGLAD-----TWAAMPDNKMVG---KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS-KVTVPFLTVH 255 (323)
Q Consensus 185 ~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~ 255 (323)
...... ............ ............................ .......+.+. ++++|+|+|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~i~~P~Lvi~ 245 (297)
T 2xt0_A 170 SPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGA----EIGRQAMSFWSTQWSGPTFMAV 245 (297)
T ss_dssp CTTCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTH----HHHHHHHHHHHHTCCSCEEEEE
T ss_pred ccccchhHHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchh----hHHHHHHHHhhhccCCCeEEEE
Confidence 000000 000000000000 0000000000000000000000000000 00112234556 8899999999
Q ss_pred eCCCcccCchhHHHHHHHhcCCCCcEEE--ecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 256 GTADGVTCPTSSKLLYEKASSADKSIKI--YDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|++|.++| +..+.+.+.+ +++++.+ ++++||++++ +| +++++.|.+||.
T Consensus 246 G~~D~~~~-~~~~~~~~~~--p~~~~~~~~~~~~GH~~~~-~p----~~~~~~i~~fl~ 296 (297)
T 2xt0_A 246 GAQDPVLG-PEVMGMLRQA--IRGCPEPMIVEAGGHFVQE-HG----EPIARAALAAFG 296 (297)
T ss_dssp ETTCSSSS-HHHHHHHHHH--STTCCCCEEETTCCSSGGG-GC----HHHHHHHHHHTT
T ss_pred eCCCcccC-hHHHHHHHhC--CCCeeEEeccCCCCcCccc-CH----HHHHHHHHHHHh
Confidence 99999999 8888888888 5665544 7899999996 66 668889999874
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=238.12 Aligned_cols=256 Identities=18% Similarity=0.223 Sum_probs=165.3
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++.+.+| +|+|..+++.+ +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .++++++++
T Consensus 3 ~~~~~~g~~l~y~~~g~~~---~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 77 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGPRD---APVIHFHHGWPLSAD-DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWD-GHDMDHYAD 77 (276)
T ss_dssp EEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEECCCCcEEEEEecCCCC---CCeEEEECCCCcchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CCCHHHHHH
Confidence 4667889 99999998644 678999999998877 89999999999999999999999999986533 358999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCC------CchhHHHHHHhhcc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPEN------MKPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~------~~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+|+.+|.++ |++ |+++|++++....... .........+....
T Consensus 78 d~~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T 1zoi_A 78 DVAAVVAHLGIQ------GAVHVGHSTGGGEVVRYMARHPEDK-VAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQV 150 (276)
T ss_dssp HHHHHHHHHTCT------TCEEEEETHHHHHHHHHHHHCTTSC-CCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC------ceEEEEECccHHHHHHHHHHhCHHh-eeeeEEecCCCccccccccccccccHHHHHHHHHHH
Confidence 999999999754 899999999999999988887 888 9999999875422110 00000010000000
Q ss_pred c----cccccccc--CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEeeC
Q 020630 186 F----GLADTWAA--MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~ 257 (323)
. .....+.. ........................ . ............. .+..+.+.++++|+|+|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~ 225 (276)
T 1zoi_A 151 ASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGM---I--GSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGD 225 (276)
T ss_dssp HHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEET
T ss_pred HHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhh---h--hhHHHHHHHHHHhcccchhhhccccCCCEEEEEcC
Confidence 0 00000000 000000000000000000000000 0 0000001111000 01123456789999999999
Q ss_pred CCcccCchh-HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|.+. .+.+.+.+ +++++++++++||++++++ ++++.+.|.+||+
T Consensus 226 ~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 226 DDQIVPYENSGVLSAKLL--PNGALKTYKGYPHGMPTTH----ADVINADLLAFIR 275 (276)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHT----HHHHHHHHHHHHT
T ss_pred CCcccChHHHHHHHHhhC--CCceEEEcCCCCCchhhhC----HHHHHHHHHHHhc
Confidence 999999884 45566666 7899999999999999544 4779999999985
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=235.76 Aligned_cols=254 Identities=17% Similarity=0.248 Sum_probs=162.4
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.|| +|+|..++. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~ 74 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGS-----GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT-GNDYDTFAD 74 (271)
T ss_dssp EEECTTSCEEEEEEESS-----SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEEcCCCCEEEEEccCC-----CCeEEEECCCCCcHH-HHHHHHHHHHhCCceEEEecCCCCccCCCCCC-CCCHHHHHH
Confidence 5778899 999999973 468999999998877 89999999998899999999999999986544 358999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCC------chhHHHHHHhhcc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENM------KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~------~~~~~~~~~~~~~ 185 (323)
|+.++++.+..+ +++|+||||||.+++.+++.+ |++ |+++|++++........ ........+....
T Consensus 75 d~~~~l~~l~~~------~~~lvGhS~GG~~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (271)
T 3ia2_A 75 DIAQLIEHLDLK------EVTLVGFSMGGGDVARYIARHGSAR-VAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTEL 147 (271)
T ss_dssp HHHHHHHHHTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC------CceEEEEcccHHHHHHHHHHhCCcc-cceEEEEccCCccccCCCCCcccccHHHHHHHHHHH
Confidence 999999999754 899999999999777766665 777 99999998754321110 0000000000000
Q ss_pred ----cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEeeCCC
Q 020630 186 ----FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 186 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D 259 (323)
..+...+.......................... . ............. .+....+.++++|+|+|+|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D 222 (271)
T 3ia2_A 148 LKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIAL---L--ASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTC
T ss_pred HhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhh---h--ccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCC
Confidence 000000000000000000000000000000000 0 0000001111110 0123446789999999999999
Q ss_pred cccCchhHH-HHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 260 GVTCPTSSK-LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 260 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.++|++... .+.+.+ +++++.+++++||++++++ ++++.+.|.+||+
T Consensus 223 ~~~p~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 223 QIVPFETTGKVAAELI--KGAELKVYKDAPHGFAVTH----AQQLNEDLLAFLK 270 (271)
T ss_dssp SSSCGGGTHHHHHHHS--TTCEEEEETTCCTTHHHHT----HHHHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHhC--CCceEEEEcCCCCcccccC----HHHHHHHHHHHhh
Confidence 999998854 445555 7899999999999999544 4779999999985
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-36 Score=231.14 Aligned_cols=251 Identities=13% Similarity=0.127 Sum_probs=165.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+|+|..+++.+...+++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+... .++++++++|+.++++.
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~--~~~~~~~a~dl~~~l~~ 77 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLD-NLGVLARDLVND-HNIIQVDVRNHGLSPREP--VMNYPAMAQDLVDTLDA 77 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTT-TTHHHHHHHTTT-SCEEEECCTTSTTSCCCS--CCCHHHHHHHHHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHh-HHHHHHHHHHhh-CcEEEecCCCCCCCCCCC--CcCHHHHHHHHHHHHHH
Confidence 46788888652224789999999998876 899999999876 999999999999998754 35899999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccc
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (323)
+..+ +++|+||||||.+|+.+|.++|++ |+++|++++................+........... ......
T Consensus 78 l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 148 (255)
T 3bf7_A 78 LQID------KATFIGHSMGGKAVMALTALAPDR-IDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTR--QQAAAI 148 (255)
T ss_dssp HTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSH--HHHHHH
T ss_pred cCCC------CeeEEeeCccHHHHHHHHHhCcHh-hccEEEEcCCcccCCcccHHHHHHHHHhccccccccH--HHHHHH
Confidence 8754 899999999999999999999998 9999998754322111101111111110000000000 000000
Q ss_pred ccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH--hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCC
Q 020630 201 VGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ--DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD 278 (323)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 278 (323)
+.....+......+............ ...+........ ..+.++++|+++|+|++|.+++++..+.+.+.+ ++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~ 223 (255)
T 3bf7_A 149 MRQHLNEEGVIQFLLKSFVDGEWRFN---VPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF--PQ 223 (255)
T ss_dssp HTTTCCCHHHHHHHHTTEETTEESSC---HHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC--TT
T ss_pred HhhhcchhHHHHHHHHhccCCceeec---HHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC--CC
Confidence 01111111111211111000000000 111111111111 346788999999999999999999999998888 78
Q ss_pred CcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++++++++||++++++| +.+.+.|.+|+++
T Consensus 224 ~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 224 ARAHVIAGAGHWVHAEKP----DAVLRAIRRYLND 254 (255)
T ss_dssp EEECCBTTCCSCHHHHCH----HHHHHHHHHHHHT
T ss_pred CeEEEeCCCCCccccCCH----HHHHHHHHHHHhc
Confidence 999999999999996555 6789999999874
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=239.08 Aligned_cols=261 Identities=13% Similarity=0.130 Sum_probs=169.0
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..+++. ++|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+.. .++++++++|+.
T Consensus 13 ~~~g~~l~y~~~G~g---~~~pvvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~-~~~~~~~a~dl~ 86 (316)
T 3afi_E 13 PVLGSSMAYRETGAQ---DAPVVLFLHGNPTSSH-IWRNILPLVSPV-AHCIAPDLIGFGQSGKPDI-AYRFFDHVRYLD 86 (316)
T ss_dssp EETTEEEEEEEESCT---TSCEEEEECCTTCCGG-GGTTTHHHHTTT-SEEEEECCTTSTTSCCCSS-CCCHHHHHHHHH
T ss_pred EeCCEEEEEEEeCCC---CCCeEEEECCCCCchH-HHHHHHHHHhhC-CEEEEECCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 3467 9999998852 2469999999999877 899999999875 9999999999999986533 468999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC--CCc-----hh----HHHHHHhhc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE--NMK-----PS----KLHLFMYGL 184 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~--~~~-----~~----~~~~~~~~~ 184 (323)
++++.++.+ +++|+||||||.+|+.+|.++|++ |+++|++++...... ... .. .........
T Consensus 87 ~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T 3afi_E 87 AFIEQRGVT------SAYLVAQDWGTALAFHLAARRPDF-VRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRK 159 (316)
T ss_dssp HHHHHTTCC------SEEEEEEEHHHHHHHHHHHHCTTT-EEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHcCCC------CEEEEEeCccHHHHHHHHHHCHHh-hhheeeeccCCCcchhhhccchhhccccccchhHHHHHHH
Confidence 999999754 899999999999999999999999 999999987432100 000 00 000000000
Q ss_pred ccc-c-----cc---ccccCCCcccccccccChhhHHHhhcCCcc---------cCCCCCchhHHHHHHhhHHHHhcCCc
Q 020630 185 LFG-L-----AD---TWAAMPDNKMVGKAIKDPEKLKVIASNPRR---------YTGKPRVGTMREIARVCQYIQDNFSK 246 (323)
Q Consensus 185 ~~~-~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (323)
+.. . .. .+............................ .......................+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 239 (316)
T 3afi_E 160 FRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAA 239 (316)
T ss_dssp HTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred hcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhc
Confidence 000 0 00 000000000000000000001110000000 00000000000111111223345667
Q ss_pred ccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++|+|+|+|++|.++|.+..+.+.+.+ +++++++++++||++++ +.++++.+.|.+||.+...
T Consensus 240 i~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~GH~~~~----e~p~~~~~~i~~fl~~~~~ 303 (316)
T 3afi_E 240 SSYPKLLFTGEPGALVSPEFAERFAASL--TRCALIRLGAGLHYLQE----DHADAIGRSVAGWIAGIEA 303 (316)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHS--SSEEEEEEEEECSCHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEecCCCCccCHHHHHHHHHhC--CCCeEEEcCCCCCCchh----hCHHHHHHHHHHHHhhcCC
Confidence 8999999999999999999999999988 78999999999999994 5567799999999987654
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=234.55 Aligned_cols=256 Identities=19% Similarity=0.240 Sum_probs=164.7
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.+| +|+|..+++.+ +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~~~---~~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 76 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGPRD---GLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-GHDMDTYAA 76 (275)
T ss_dssp EEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEEccCCCEEEEEEcCCCC---CceEEEECCCCCchh-hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCC-CCCHHHHHH
Confidence 4677889 99999998754 678999999998877 89999999999999999999999999986543 358999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCC------chhHHHHHHhhcc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENM------KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~------~~~~~~~~~~~~~ 185 (323)
|+.++++.+..+ +++|+||||||.+++.++.++ |++ |+++|++++........ ........+...+
T Consensus 77 dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
T 1a88_A 77 DVAALTEALDLR------GAVHIGHSTGGGEVARYVARAEPGR-VAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAAL 149 (275)
T ss_dssp HHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHSCTTS-EEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC------ceEEEEeccchHHHHHHHHHhCchh-eEEEEEecCCCcccccCccCcccCCHHHHHHHHHHH
Confidence 999999998754 899999999999999988876 888 99999998754221100 0000010000000
Q ss_pred c----cccccccc--CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeC
Q 020630 186 F----GLADTWAA--MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 257 (323)
. .+...... ........................ . .............. +....+.++++|+|+++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 224 (275)
T 1a88_A 150 AANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM---M--GAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGT 224 (275)
T ss_dssp HHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEET
T ss_pred hhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhh---h--cchHhHHHHHhhhhhcccccccccCCCCEEEEecC
Confidence 0 00000000 000000000000000000000000 0 00000011111000 1123456789999999999
Q ss_pred CCcccCchh-HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|++. .+.+.+.+ +++++++++++||++++++ ++++.+.|.+||+
T Consensus 225 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 274 (275)
T 1a88_A 225 DDQVVPYADAAPKSAELL--ANATLKSYEGLPHGMLSTH----PEVLNPDLLAFVK 274 (275)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHC----HHHHHHHHHHHHH
T ss_pred CCccCCcHHHHHHHHhhC--CCcEEEEcCCCCccHHHhC----HHHHHHHHHHHhh
Confidence 999999884 44555666 6899999999999999554 4679999999985
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=238.04 Aligned_cols=251 Identities=15% Similarity=0.158 Sum_probs=164.3
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..++. +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .++++++++|+.
T Consensus 9 ~~~g~~l~y~~~g~-----g~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~dl~ 81 (277)
T 1brt_A 9 NSTSIDLYYEDHGT-----GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTT-GYDYDTFAADLN 81 (277)
T ss_dssp TTEEEEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHHH
T ss_pred cCCCcEEEEEEcCC-----CCeEEEECCCCCcHH-HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCC-CccHHHHHHHHH
Confidence 4677 999998873 456999999998877 89999999999899999999999999986543 358999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC-CCeeEEEEccCccCCCCC--Cc-----hhHHHHHHhhcccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVIPEN--MK-----PSKLHLFMYGLLFG 187 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~il~~~~~~~~~~--~~-----~~~~~~~~~~~~~~ 187 (323)
++++++..+ +++|+||||||.+++.+|.++|+ + |+++|++++....... .. .......+......
T Consensus 82 ~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
T 1brt_A 82 TVLETLDLQ------DAVLVGFSTGTGEVARYVSSYGTAR-IAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA 154 (277)
T ss_dssp HHHHHHTCC------SEEEEEEGGGHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHH
T ss_pred HHHHHhCCC------ceEEEEECccHHHHHHHHHHcCcce-EEEEEEecCcCccccccccCccccccHHHHHHHHHHHhc
Confidence 999999754 89999999999999999999998 8 9999999875332110 00 00001000000000
Q ss_pred ----ccccccc-CCCcc-cccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh-hHHHHhcCCcccccEEEEeeCCCc
Q 020630 188 ----LADTWAA-MPDNK-MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-CQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 188 ----~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
....... ..... .................... ............ ..+....+.++++|+|+|+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 229 (277)
T 1brt_A 155 DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS-----GGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDR 229 (277)
T ss_dssp CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHH-----SCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCS
T ss_pred CchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhc-----cchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCc
Confidence 0000000 00000 00000000000000000000 000000000000 001123567889999999999999
Q ss_pred ccCchhH-HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 261 VTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|.+.+ +.+.+.+ +++++++++++||++++++ ++++.+.|.+||.
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fl~ 276 (277)
T 1brt_A 230 TLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTH----AEEVNTALLAFLA 276 (277)
T ss_dssp SSCGGGTHHHHHHHC--TTSEEEEETTCCTTHHHHT----HHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHC--CCCcEEEeCCCCcchhhhC----HHHHHHHHHHHHh
Confidence 9999888 8888888 7899999999999999654 4678999999985
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=237.32 Aligned_cols=258 Identities=15% Similarity=0.093 Sum_probs=166.0
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH-HHHHHhcCCcEEEEeccccCcCCCC--CCCCCCChHHHH
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISYATWGYAVFAADLLGHGRSDG--IRCYLGDMEKVA 111 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~g~~vi~~d~~G~G~s~~--~~~~~~~~~~~~ 111 (323)
...+| +++|..+++.+ +|+|||+||++++.. .|.. +++.|+++||+|+++|+||||.|+. +....+++++++
T Consensus 6 ~~~~g~~l~y~~~G~~~---~~~vvllHG~~~~~~-~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a 81 (298)
T 1q0r_A 6 VPSGDVELWSDDFGDPA---DPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 81 (298)
T ss_dssp EEETTEEEEEEEESCTT---SCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred eccCCeEEEEEeccCCC---CCeEEEEcCCCCCcc-chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHH
Confidence 34688 99999998644 679999999998876 7865 5689999899999999999999986 323346899999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc-CCCC---------------CC--c
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF-VIPE---------------NM--K 173 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~-~~~~---------------~~--~ 173 (323)
+|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++.. .... .. .
T Consensus 82 ~dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
T 1q0r_A 82 ADAVAVLDGWGVD------RAHVVGLSMGATITQVIALDHHDR-LSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 154 (298)
T ss_dssp HHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred HHHHHHHHHhCCC------ceEEEEeCcHHHHHHHHHHhCchh-hheeEEecccCCCcccccchhhhhhhhhhhcccccc
Confidence 9999999999754 899999999999999999999999 99999998765 2100 00 0
Q ss_pred hhHHHHHHhhcc------cccccccccCCCccccc-cc-ccChhhHHHhhcCCccc-CCCCC-chhHHHHHHhhHHHHhc
Q 020630 174 PSKLHLFMYGLL------FGLADTWAAMPDNKMVG-KA-IKDPEKLKVIASNPRRY-TGKPR-VGTMREIARVCQYIQDN 243 (323)
Q Consensus 174 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 243 (323)
.......+.... .......... ...... .. ................. ..... ..... .. ...+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 231 (298)
T 1q0r_A 155 QQPFLDALALMNQPAEGRAAEVAKRVSK-WRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYS-LT-LPPPSRAA 231 (298)
T ss_dssp CHHHHHHHHHHHSCCCSHHHHHHHHHHH-HHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGG-CC-CCCGGGGG
T ss_pred cHHHHHHHhccCcccccHHHHHHHHHHh-hhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhh-hh-cCcccccc
Confidence 000011110000 0000000000 000000 00 00000000000000000 00000 00000 00 00112345
Q ss_pred -CCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 244 -FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 244 -~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++|| +.|+ ++.+.|.+||.++...
T Consensus 232 ~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH----e~p~----~~~~~i~~fl~~~~~~ 296 (298)
T 1q0r_A 232 ELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGH----ALPS----SVHGPLAEVILAHTRS 296 (298)
T ss_dssp GGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS--TTEEEEEETTCCS----SCCG----GGHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEEeCCCccCCHHHHHHHHHhC--CCCEEEEcCCCCC----CCcH----HHHHHHHHHHHHHhhc
Confidence 7889999999999999999999999999888 7899999999999 4554 4778888898877643
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=235.28 Aligned_cols=249 Identities=14% Similarity=0.132 Sum_probs=162.2
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhH
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
...+| +++|...+. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .++++++++|+
T Consensus 12 ~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~dl 84 (281)
T 3fob_A 12 ENQAPIEIYYEDHGT-----GKPVVLIHGWPLSGR-SWEYQVPALVEAGYRVITYDRRGFGKSSQPWE-GYEYDTFTSDL 84 (281)
T ss_dssp ETTEEEEEEEEEESS-----SEEEEEECCTTCCGG-GGTTTHHHHHHTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHH
T ss_pred CCCCceEEEEEECCC-----CCeEEEECCCCCcHH-HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-ccCHHHHHHHH
Confidence 45677 999998874 568999999998877 88888999988899999999999999987643 35899999999
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCC-------CCCchhHHHHHHhh---
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIP-------ENMKPSKLHLFMYG--- 183 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~-------~~~~~~~~~~~~~~--- 183 (323)
.++++.+..+ +++|+||||||.+++.++..+ |++ |+++|++++..... ...........+..
T Consensus 85 ~~ll~~l~~~------~~~lvGhS~GG~i~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (281)
T 3fob_A 85 HQLLEQLELQ------NVTLVGFSMGGGEVARYISTYGTDR-IEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVI 157 (281)
T ss_dssp HHHHHHTTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHH
T ss_pred HHHHHHcCCC------cEEEEEECccHHHHHHHHHHccccc-eeEEEEecCCCcchhccccccccccchhHHHHHHHHhh
Confidence 9999999754 899999999999888877765 787 99999998653211 00000000000000
Q ss_pred -----cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEee
Q 020630 184 -----LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 184 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g 256 (323)
.+..+...+..... ... ............. .. .............. .+....+.++++|+|+|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G 229 (281)
T 3fob_A 158 NDRLAFLDEFTKGFFAAGD---RTD-LVSESFRLYNWDI---AA-GASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHG 229 (281)
T ss_dssp HHHHHHHHHHHHHHTCBTT---BCC-SSCHHHHHHHHHH---HH-TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEE
T ss_pred hhHHHHHHHHHHHhccccc---ccc-cchHHHHHHhhhh---hc-ccChHHHHHHHHHccccchhhhhhhcCCCEEEEec
Confidence 00000000000000 000 0000000000000 00 00001111111111 0123457889999999999
Q ss_pred CCCcccCchhH-HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 257 TADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 257 ~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|.++|.+.+ +.+.+.+ +++++++++++||++++++ ++++.+.|.+||+
T Consensus 230 ~~D~~~p~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~----p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 230 DSDATVPFEYSGKLTHEAI--PNSKVALIKGGPHGLNATH----AKEFNEALLLFLK 280 (281)
T ss_dssp TTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTHHHHT----HHHHHHHHHHHHC
T ss_pred CCCCCcCHHHHHHHHHHhC--CCceEEEeCCCCCchhhhh----HHHHHHHHHHHhh
Confidence 99999999876 6666777 7899999999999999554 4779999999985
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=225.43 Aligned_cols=240 Identities=21% Similarity=0.257 Sum_probs=168.3
Q ss_pred cCCC-cEEEEEecCCC-CCCceEEEEecCCCCC--cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 37 TPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSD--TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
..+| +|+++.+.|.+ .+++|+|||+||++++ .. .|..+++.|+++||+|+++|+||||.|+.... .++++++++
T Consensus 7 ~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 84 (251)
T 2wtm_A 7 DCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEER-HIVAVQETLNEIGVATLRADMYGHGKSDGKFE-DHTLFKWLT 84 (251)
T ss_dssp EETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG-GCCHHHHHH
T ss_pred ecCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccc-cHHHHHHHHHHCCCEEEEecCCCCCCCCCccc-cCCHHHHHH
Confidence 3577 99999998864 2457899999999988 55 78999999999999999999999999986433 247889999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
|+.++++++..... ..+++|+||||||.+++.+|.++|++ |+++|+++|..... .. . ....+... .+
T Consensus 85 d~~~~~~~l~~~~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~-----~~-~--~~~~~~~~--~~ 151 (251)
T 2wtm_A 85 NILAVVDYAKKLDF--VTDIYMAGHSQGGLSVMLAAAMERDI-IKALIPLSPAAMIP-----EI-A--RTGELLGL--KF 151 (251)
T ss_dssp HHHHHHHHHTTCTT--EEEEEEEEETHHHHHHHHHHHHTTTT-EEEEEEESCCTTHH-----HH-H--HHTEETTE--EC
T ss_pred HHHHHHHHHHcCcc--cceEEEEEECcchHHHHHHHHhCccc-ceEEEEECcHHHhH-----HH-H--hhhhhccc--cC
Confidence 99999999975422 23899999999999999999999998 99999998864311 00 0 00000000 00
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
........... ... ......+...... .+....+.++++|+|+++|++|.++|++.++.+.+
T Consensus 152 ~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~-~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~ 213 (251)
T 2wtm_A 152 DPENIPDELDA-WDG----------------RKLKGNYVRVAQT-IRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSK 213 (251)
T ss_dssp BTTBCCSEEEE-TTT----------------EEEETHHHHHHTT-CCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred CchhcchHHhh-hhc----------------cccchHHHHHHHc-cCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHH
Confidence 00000000000 000 0000000000000 01223445678999999999999999999999998
Q ss_pred HhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+ +++++++++++||.+ .++| +++.+.|.+||+++++
T Consensus 214 ~~--~~~~~~~~~~~gH~~-~~~~----~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 214 QY--KNCKLVTIPGDTHCY-DHHL----ELVTEAVKEFMLEQIA 250 (251)
T ss_dssp HS--SSEEEEEETTCCTTC-TTTH----HHHHHHHHHHHHHHHC
T ss_pred hC--CCcEEEEECCCCccc-chhH----HHHHHHHHHHHHHhcc
Confidence 88 789999999999999 5554 6699999999988764
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=231.05 Aligned_cols=253 Identities=16% Similarity=0.206 Sum_probs=164.3
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.+| +++|..++. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~-----g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 74 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWGQ-----GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD-GYDFDTFAD 74 (274)
T ss_dssp EEECTTSCEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEEccCCCEEEEEecCC-----CceEEEECCCcchHH-HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-CCcHHHHHH
Confidence 4677889 999998872 568999999998877 89999999999999999999999999986533 358999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCC--C----CchhHHHHHHhhc-
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPE--N----MKPSKLHLFMYGL- 184 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~--~----~~~~~~~~~~~~~- 184 (323)
|+.++++.+..+ +++|+||||||.+++.++.++ |++ |+++|++++...... . .........+...
T Consensus 75 dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (274)
T 1a8q_A 75 DLNDLLTDLDLR------DVTLVAHSMGGGELARYVGRHGTGR-LRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGV 147 (274)
T ss_dssp HHHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC------ceEEEEeCccHHHHHHHHHHhhhHh-eeeeeEecCCCccccccccCcccchHHHHHHHHHHh
Confidence 999999998754 899999999999999988776 888 999999987532110 0 0000001000000
Q ss_pred -------ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEe
Q 020630 185 -------LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 185 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~ 255 (323)
...+...+.... . .................. ............... +....+.++++|+|+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 219 (274)
T 1a8q_A 148 LTERSQFWKDTAEGFFSAN-R--PGNKVTQGNKDAFWYMAM-----AQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVH 219 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTT-S--TTCCCCHHHHHHHHHHHT-----TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred hccHHHHHHHhcccccccc-c--ccccccHHHHHHHHHHhh-----hcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEe
Confidence 000000000000 0 000000000011110000 000111111111111 12345678899999999
Q ss_pred eCCCcccCchh-HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 256 GTADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 256 g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|++|.++|++. .+.+.+.+ +++++++++++||+++++ + +.++++.+.|.+||+
T Consensus 220 G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-~-~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 220 GDDDQVVPIDATGRKSAQII--PNAELKVYEGSSHGIAMV-P-GDKEKFNRDLLEFLN 273 (274)
T ss_dssp ETTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTTTTS-T-THHHHHHHHHHHHHT
T ss_pred cCcCCCCCcHHHHHHHHhhC--CCceEEEECCCCCceecc-c-CCHHHHHHHHHHHhc
Confidence 99999999884 44555666 789999999999999954 0 145779999999985
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=234.86 Aligned_cols=250 Identities=16% Similarity=0.169 Sum_probs=168.2
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..+++.+ .++|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+.. .++++++++|+.
T Consensus 8 ~~~g~~l~y~~~g~~~-~~~~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl~ 83 (266)
T 2xua_A 8 AVNGTELHYRIDGERH-GNAPWIVLSNSLGTDLS-MWAPQVAALSKH-FRVLRYDTRGHGHSEAPKG-PYTIEQLTGDVL 83 (266)
T ss_dssp ECSSSEEEEEEESCSS-SCCCEEEEECCTTCCGG-GGGGGHHHHHTT-SEEEEECCTTSTTSCCCSS-CCCHHHHHHHHH
T ss_pred EECCEEEEEEEcCCcc-CCCCeEEEecCccCCHH-HHHHHHHHHhcC-eEEEEecCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 3477 99999998642 23689999999998877 889999999865 9999999999999986543 358999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH--HHhhc-cccccccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--FMYGL-LFGLADTW 192 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~ 192 (323)
++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+... ..... ........
T Consensus 84 ~~l~~l~~~------~~~lvGhS~Gg~va~~~A~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 154 (266)
T 2xua_A 84 GLMDTLKIA------RANFCGLSMGGLTGVALAARHADR-IERVALCNTAARIGSP--EVWVPRAVKARTEGMHALADAV 154 (266)
T ss_dssp HHHHHTTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCSCH--HHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHhcCCC------ceEEEEECHHHHHHHHHHHhChhh-hheeEEecCCCCCCch--HHHHHHHHHHHhcChHHHHHHH
Confidence 999998754 899999999999999999999999 9999999987543221 111100 00000 00000000
Q ss_pred -ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 193 -AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
......... ...+.....+..... . .....+........ +..+.+.++++|+++++|++|.++|++.++.
T Consensus 155 ~~~~~~~~~~---~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 227 (266)
T 2xua_A 155 LPRWFTADYM---EREPVVLAMIRDVFV---H-TDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRE 227 (266)
T ss_dssp HHHHSCHHHH---HHCHHHHHHHHHHHH---T-SCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHcCcccc---cCCHHHHHHHHHHHh---h-CCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHH
Confidence 000000000 001110011100000 0 00011111111111 1234577889999999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+.+ +++++++++ +||++++++| +++.+.|.+||.+
T Consensus 228 ~~~~~--~~~~~~~~~-~gH~~~~e~p----~~~~~~i~~fl~~ 264 (266)
T 2xua_A 228 LAQAI--AGARYVELD-ASHISNIERA----DAFTKTVVDFLTE 264 (266)
T ss_dssp HHHHS--TTCEEEEES-CCSSHHHHTH----HHHHHHHHHHHTC
T ss_pred HHHhC--CCCEEEEec-CCCCchhcCH----HHHHHHHHHHHHh
Confidence 99988 778999999 9999996554 6789999999863
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=231.49 Aligned_cols=254 Identities=20% Similarity=0.224 Sum_probs=162.9
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.+| +++|..++. +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~-----~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 74 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWGS-----GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-GNDMDTYAD 74 (273)
T ss_dssp EEECTTSCEEEEEEESC-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEecCCCcEEEEEEcCC-----CCEEEEECCCCCcHH-HHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC-CCCHHHHHH
Confidence 4677889 999998872 568999999998877 89999999999999999999999999986543 358999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCC------CchhHHHHHHhhcc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPEN------MKPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~------~~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+++.++.++ |++ |+++|++++....... .........+....
T Consensus 75 dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T 1a8s_A 75 DLAQLIEHLDLR------DAVLFGFSTGGGEVARYIGRHGTAR-VAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQAS 147 (273)
T ss_dssp HHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC------CeEEEEeChHHHHHHHHHHhcCchh-eeEEEEEcccCcccccCccccccCcHHHHHHHHHHh
Confidence 999999998754 899999999999999988776 888 9999999875322100 00000000000000
Q ss_pred c----cccccccc--CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeC
Q 020630 186 F----GLADTWAA--MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 257 (323)
. .+...... ........................ . .............. +....+.++++|+|+++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 222 (273)
T 1a8s_A 148 LADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM---A--AGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGD 222 (273)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEET
T ss_pred HhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcc---c--cchhHHHHHHHHHhccChhhhhhcCCCCEEEEECC
Confidence 0 00000000 000000000000000000000000 0 00001111111110 1123456789999999999
Q ss_pred CCcccCchh-HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|.+. .+.+.+.+ +++++++++++||++++++ ++++.+.|.+||+
T Consensus 223 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 223 ADQVVPIEASGIASAALV--KGSTLKIYSGAPHGLTDTH----KDQLNADLLAFIK 272 (273)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTCEEEEETTCCSCHHHHT----HHHHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHhC--CCcEEEEeCCCCCcchhhC----HHHHHHHHHHHHh
Confidence 999999884 45555666 7899999999999999544 5779999999985
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=229.50 Aligned_cols=248 Identities=15% Similarity=0.147 Sum_probs=164.6
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc--hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHH
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
+...+| +++|...+. +++|||+||++.+.. ..|..+++.|+ ++|+|+++|+||||.|+.+....+++++++
T Consensus 9 ~~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a 82 (282)
T 1iup_A 9 SILAAGVLTNYHDVGE-----GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYNYSKDSWV 82 (282)
T ss_dssp EEEETTEEEEEEEECC-----SSEEEEECCCCTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCCCCHHHHH
T ss_pred eEEECCEEEEEEecCC-----CCeEEEECCCCCCccHHHHHHHHHHhhc-cCCEEEEECCCCCCCCCCCCCCCCCHHHHH
Confidence 344578 999998863 468999999875532 25677778885 479999999999999987654446899999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc------c
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL------L 185 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~------~ 185 (323)
+|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++........ .. ....... +
T Consensus 83 ~dl~~~l~~l~~~------~~~lvGhS~GG~ia~~~A~~~P~~-v~~lvl~~~~~~~~~~~-~~--~~~~~~~~~~~~~~ 152 (282)
T 1iup_A 83 DHIIGIMDALEIE------KAHIVGNAFGGGLAIATALRYSER-VDRMVLMGAAGTRFDVT-EG--LNAVWGYTPSIENM 152 (282)
T ss_dssp HHHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHSGGG-EEEEEEESCCCSCCCCC-HH--HHHHHTCCSCHHHH
T ss_pred HHHHHHHHHhCCC------ceEEEEECHhHHHHHHHHHHChHH-HHHHHeeCCccCCCCCC-HH--HHHHhcCCCcHHHH
Confidence 9999999998754 899999999999999999999999 99999999865422111 11 1111000 0
Q ss_pred cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHH-----HhhHHH---HhcCCcccccEEEEeeC
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-----RVCQYI---QDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~P~l~i~g~ 257 (323)
..+..... .... .............. ........+..+. ...... ...+.++++|+|+|+|+
T Consensus 153 ~~~~~~~~--~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 222 (282)
T 1iup_A 153 RNLLDIFA--YDRS----LVTDELARLRYEAS----IQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGR 222 (282)
T ss_dssp HHHHHHHC--SSGG----GCCHHHHHHHHHHH----TSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEET
T ss_pred HHHHHHhh--cCcc----cCCHHHHHHHHhhc----cChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecC
Confidence 00000000 0000 00000000000000 0000000000000 000001 14567889999999999
Q ss_pred CCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|.++|.+.++.+.+.+ +++++++++++||++++++| +++.+.|.+||++.
T Consensus 223 ~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 223 EDQVVPLSSSLRLGELI--DRAQLHVFGRCGHWTQIEQT----DRFNRLVVEFFNEA 273 (282)
T ss_dssp TCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSH----HHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHhC--CCCeEEEECCCCCCccccCH----HHHHHHHHHHHhcC
Confidence 99999999999999988 78999999999999996554 77999999999763
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=231.29 Aligned_cols=254 Identities=14% Similarity=0.164 Sum_probs=166.7
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCC-CCCC-CCChHH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG-IRCY-LGDMEK 109 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~-~~~~-~~~~~~ 109 (323)
..+...+| +++|..+++.+ +|+|||+||++++....|..+++.|++ ||+|+++|+||||.|+. +... .+++++
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~---~~~vvllHG~~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVE---GPALFVLHGGPGGNAYVLREGLQDYLE-GFRVVYFDQRGSGRSLELPQDPRLFTVDA 80 (286)
T ss_dssp EEEEECSSCEEEEEEESCTT---SCEEEEECCTTTCCSHHHHHHHGGGCT-TSEEEEECCTTSTTSCCCCSCGGGCCHHH
T ss_pred eeEEeECCEEEEEEeecCCC---CCEEEEECCCCCcchhHHHHHHHHhcC-CCEEEEECCCCCCCCCCCccCcccCcHHH
Confidence 34556678 99999998743 679999999998764258888988854 79999999999999987 4331 468999
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHh-hc----
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY-GL---- 184 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~-~~---- 184 (323)
+++|+.++++.+..+ +++|+||||||.+|+.+|.++|+ |+++|++++..... ....... ..
T Consensus 81 ~a~dl~~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~--v~~lvl~~~~~~~~------~~~~~~~~~~~~~~ 146 (286)
T 2yys_A 81 LVEDTLLLAEALGVE------RFGLLAHGFGAVVALEVLRRFPQ--AEGAILLAPWVNFP------WLAARLAEAAGLAP 146 (286)
T ss_dssp HHHHHHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHCTT--EEEEEEESCCCBHH------HHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhCCC------cEEEEEeCHHHHHHHHHHHhCcc--hheEEEeCCccCcH------HHHHHHHHHhcccc
Confidence 999999999999754 89999999999999999999998 99999999865211 0000000 00
Q ss_pred ----ccccccccccCCCcccccc--cccCh--hhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEE
Q 020630 185 ----LFGLADTWAAMPDNKMVGK--AIKDP--EKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTV 254 (323)
Q Consensus 185 ----~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i 254 (323)
...+............... ..... ............. ......... ...... +....+.++++|+|+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lvi 224 (286)
T 2yys_A 147 LPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGIL-GSDAPGLAF-LRNGLWRLDYTPYLTPERRPLYVL 224 (286)
T ss_dssp CSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCC-CCSHHHHHH-HHTTGGGCBCGGGCCCCSSCEEEE
T ss_pred chhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhc-cccccchhh-cccccccCChhhhhhhcCCCEEEE
Confidence 0000000000000000000 00000 0000000000000 000000000 111110 1234578899999999
Q ss_pred eeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|++|.+++.+ ++.+.+ + +++++++++++||++++++| +++.+.|.+||.+.
T Consensus 225 ~G~~D~~~~~~-~~~~~~-~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 225 VGERDGTSYPY-AEEVAS-R--LRAPIRVLPEAGHYLWIDAP----EAFEEAFKEALAAL 276 (286)
T ss_dssp EETTCTTTTTT-HHHHHH-H--HTCCEEEETTCCSSHHHHCH----HHHHHHHHHHHHTT
T ss_pred EeCCCCcCCHh-HHHHHh-C--CCCCEEEeCCCCCCcChhhH----HHHHHHHHHHHHhh
Confidence 99999999999 999988 8 78999999999999996554 67999999999764
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=222.56 Aligned_cols=245 Identities=18% Similarity=0.198 Sum_probs=175.1
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+..+...+| +|+|+.++|.+ .++|+||++||++++. ...|..+++.|+++||.|+++|+||+|.|...... .+++
T Consensus 22 ~~~~~~~~~g~~l~~~~~~p~~-~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~ 99 (270)
T 3pfb_A 22 MATITLERDGLQLVGTREEPFG-EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFEN-MTVL 99 (270)
T ss_dssp EEEEEEEETTEEEEEEEEECSS-SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG-CCHH
T ss_pred ceEEEeccCCEEEEEEEEcCCC-CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCc-cCHH
Confidence 3444555688 99999999875 5689999999999873 23688999999999999999999999999875443 4789
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
++++|+.++++++....+ ..+++|+|||+||.+++.+|..+|++ |+++|+++|...... ..........
T Consensus 100 ~~~~d~~~~i~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~--------~~~~~~~~~~ 168 (270)
T 3pfb_A 100 NEIEDANAILNYVKTDPH--VRNIYLVGHAQGGVVASMLAGLYPDL-IKKVVLLAPAATLKG--------DALEGNTQGV 168 (270)
T ss_dssp HHHHHHHHHHHHHHTCTT--EEEEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCTHHHH--------HHHHTEETTE
T ss_pred HHHHhHHHHHHHHHhCcC--CCeEEEEEeCchhHHHHHHHHhCchh-hcEEEEeccccccch--------hhhhhhhhcc
Confidence 999999999999976543 44899999999999999999999998 999999998754211 0011110000
Q ss_pred ccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHH
Q 020630 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
........ ..... . ............... .....+.++++|+++++|++|.++|.+.++
T Consensus 169 ~~~~~~~~--~~~~~--~----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 227 (270)
T 3pfb_A 169 TYNPDHIP--DRLPF--K----------------DLTLGGFYLRIAQQL-PIYEVSAQFTKPVCLIHGTDDTVVSPNASK 227 (270)
T ss_dssp ECCTTSCC--SEEEE--T----------------TEEEEHHHHHHHHHC-CHHHHHTTCCSCEEEEEETTCSSSCTHHHH
T ss_pred ccCccccc--ccccc--c----------------ccccchhHhhccccc-CHHHHHhhCCccEEEEEcCCCCCCCHHHHH
Confidence 00000000 00000 0 000000111111111 133456788999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 269 LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+.+ +++++++++++||.++ .+..+++.+.|.+||+++.
T Consensus 228 ~~~~~~--~~~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 228 KYDQIY--QNSTLHLIEGADHCFS----DSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp HHHHHC--SSEEEEEETTCCTTCC----THHHHHHHHHHHHHHC---
T ss_pred HHHHhC--CCCeEEEcCCCCcccC----ccchHHHHHHHHHHHhhcC
Confidence 999987 7899999999999998 5667889999999998753
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=227.27 Aligned_cols=252 Identities=15% Similarity=0.100 Sum_probs=166.4
Q ss_pred EEecCC-CcEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHH
Q 020630 34 YFETPN-GKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 34 ~~~~~~-g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
++...+ .+++|..+++. ++|+|||+||++ ++.. .|..+++.|++. |+|+++|+||||.|+.+....+++++
T Consensus 17 ~~~~~g~~~l~y~~~G~g---~~~~vvllHG~~pg~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~ 91 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVG---NDQTVVLLHGGGPGAASWT-NFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRY 91 (291)
T ss_dssp EEESSSEEEEEEEEECTT---CSSEEEEECCCCTTCCHHH-HTTTTHHHHTTT-SEEEEECCTTSTTSCCCSCCSSHHHH
T ss_pred EEEeCCcEEEEEEecCCC---CCCcEEEECCCCCccchHH-HHHHHHHHHHhc-CEEEEECCCCCCCCCCCCCCCcCHHH
Confidence 344444 38999888752 246999999997 5544 788888899876 99999999999999876543468999
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch--hHHHHHHhhcccc
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SKLHLFMYGLLFG 187 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~ 187 (323)
+++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++.......... ......+...+..
T Consensus 92 ~a~dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 2wue_A 92 AAMALKGLFDQLGLG------RVPLVGNALGGGTAVRFALDYPAR-AGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164 (291)
T ss_dssp HHHHHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHSTTT-EEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCC------CeEEEEEChhHHHHHHHHHhChHh-hcEEEEECCCCCCccccccccchhhHHHHHHhcc
Confidence 999999999999754 899999999999999999999999 9999999987542211110 0011111111000
Q ss_pred -----cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH------H--HH--hcCCcccccEE
Q 020630 188 -----LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ------Y--IQ--DNFSKVTVPFL 252 (323)
Q Consensus 188 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~--~~~~~~~~P~l 252 (323)
........... ................ . ............. . .. ..+.++++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 234 (291)
T 2wue_A 165 PTRENLEAFLRVMVYD---KNLITPELVDQRFALA----S---TPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVL 234 (291)
T ss_dssp CCHHHHHHHHHTSCSS---GGGSCHHHHHHHHHHH----T---SHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEE
T ss_pred CCHHHHHHHHHHhccC---cccCCHHHHHHHHHHh----c---CchHHHHHHHHHhhccccccccchhHHHHhhCCCCeE
Confidence 00000000000 0000000001101000 0 0011111111100 0 11 45778899999
Q ss_pred EEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|+|++|.++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||++
T Consensus 235 vi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 289 (291)
T 2wue_A 235 LIWGREDRVNPLDGALVALKTI--PRAQLHVFGQCGHWVQVEKF----DEFNKLTIEFLGG 289 (291)
T ss_dssp EEEETTCSSSCGGGGHHHHHHS--TTEEEEEESSCCSCHHHHTH----HHHHHHHHHHTTC
T ss_pred EEecCCCCCCCHHHHHHHHHHC--CCCeEEEeCCCCCChhhhCH----HHHHHHHHHHHhc
Confidence 9999999999999999999988 78999999999999996554 6788999999853
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=230.47 Aligned_cols=264 Identities=14% Similarity=0.129 Sum_probs=175.5
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
+..++.. +| +++|..+++ +|+|||+||++++.. .|..+++.|..+||+|+++|+||||.|..... .+++++
T Consensus 10 ~~~~~~~-~g~~l~~~~~g~-----~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~-~~~~~~ 81 (309)
T 3u1t_A 10 AKRTVEV-EGATIAYVDEGS-----GQPVLFLHGNPTSSY-LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDI-EYRLQD 81 (309)
T ss_dssp CCEEEEE-TTEEEEEEEEEC-----SSEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCSS-CCCHHH
T ss_pred cceEEEE-CCeEEEEEEcCC-----CCEEEEECCCcchhh-hHHHHHHHHHhCCCEEEEEccCCCCCCCCCCc-ccCHHH
Confidence 3444444 77 999999875 569999999998877 78889998777799999999999999987654 458999
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc--hhH--HHHHHhhcc
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSK--LHLFMYGLL 185 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~--~~~--~~~~~~~~~ 185 (323)
+++|+.++++.+..+ +++|+||||||.+++.+|.++|++ |+++|++++......... ..+ ........+
T Consensus 82 ~~~~~~~~~~~~~~~------~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
T 3u1t_A 82 HVAYMDGFIDALGLD------DMVLVIHDWGSVIGMRHARLNPDR-VAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDL 154 (309)
T ss_dssp HHHHHHHHHHHHTCC------SEEEEEEEHHHHHHHHHHHHCTTT-EEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC------ceEEEEeCcHHHHHHHHHHhChHh-heEEEEeccCCCCccccccccccchhhhHHHHHH
Confidence 999999999998643 899999999999999999999999 999999997765331110 000 111111100
Q ss_pred ccc-ccccccCCCcccc----c-----ccccChhhHHHhhcCCcccCCCCCchhHHHH-------------HHhhHHHHh
Q 020630 186 FGL-ADTWAAMPDNKMV----G-----KAIKDPEKLKVIASNPRRYTGKPRVGTMREI-------------ARVCQYIQD 242 (323)
Q Consensus 186 ~~~-~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 242 (323)
... ...........+. . .............. +............ .....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (309)
T 3u1t_A 155 RTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAP----FPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGE 230 (309)
T ss_dssp TSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTT----CCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHH
T ss_pred hccchhhhhccccceehhhhcccccccccCCHHHHHHHHHh----cCCccccchHHHHHHHhccccccchhhhhhhhhhh
Confidence 000 0000000000000 0 00000001111100 0000000111111 111123345
Q ss_pred cCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhcC
Q 020630 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCG 319 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 319 (323)
.+.++++|+++|+|++|.++|.+.++.+.+.+ ++.++++++++||+++++ .++++.+.|.+||+++.+...
T Consensus 231 ~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~----~p~~~~~~i~~fl~~~~~~~~ 301 (309)
T 3u1t_A 231 WLMASPIPKLLFHAEPGALAPKPVVDYLSENV--PNLEVRFVGAGTHFLQED----HPHLIGQGIADWLRRNKPHAS 301 (309)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCHHHH----CHHHHHHHHHHHHHHHCCCCC
T ss_pred hcccCCCCEEEEecCCCCCCCHHHHHHHHhhC--CCCEEEEecCCcccchhh----CHHHHHHHHHHHHHhcchhhh
Confidence 56788999999999999999999999999988 778888899999999954 457799999999999875443
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=233.16 Aligned_cols=259 Identities=13% Similarity=0.115 Sum_probs=164.7
Q ss_pred EecCCC-cEEEEEecCCCCC-CceEEEEecCCCCCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCC---CCCCChH
Q 020630 35 FETPNG-KLFTQSFLPLDQK-VKATVYMTHGYGSDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIR---CYLGDME 108 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~---~~~~~~~ 108 (323)
+...+| +++|..+++.+.. ++++|||+||++++.. .|......|++ .||+|+++|+||||.|+..+ ...++++
T Consensus 32 ~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~-~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~~ 110 (330)
T 3nwo_A 32 TVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAH-NYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQ 110 (330)
T ss_dssp EEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCS-GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCHH
T ss_pred eEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCch-hHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccHH
Confidence 344577 9999999985311 2458999999988766 56666677775 58999999999999998632 1235889
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc-
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG- 187 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (323)
.+++|+.++++.++.+ +++|+||||||.+|+.+|.++|++ |.++|++++....... ......+...+..
T Consensus 111 ~~a~dl~~ll~~lg~~------~~~lvGhSmGG~va~~~A~~~P~~-v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~ 180 (330)
T 3nwo_A 111 LFVDEFHAVCTALGIE------RYHVLGQSWGGMLGAEIAVRQPSG-LVSLAICNSPASMRLW---SEAAGDLRAQLPAE 180 (330)
T ss_dssp HHHHHHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHTCCTT-EEEEEEESCCSBHHHH---HHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHcCCC------ceEEEecCHHHHHHHHHHHhCCcc-ceEEEEecCCcchHHH---HHHHHHHHHhcCHH
Confidence 9999999999999864 899999999999999999999999 9999999876432100 0000000000000
Q ss_pred cccccccCCCcccccccccChh----hHHHhhcCCcccCCCCCchhHHHHHHh----------------------h--HH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPE----KLKVIASNPRRYTGKPRVGTMREIARV----------------------C--QY 239 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~--~~ 239 (323)
....... ........... ...+......... ............ . .+
T Consensus 181 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (330)
T 3nwo_A 181 TRAALDR----HEAAGTITHPDYLQAAAEFYRRHVCRVV--PTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWS 254 (330)
T ss_dssp HHHHHHH----HHHHTCTTSHHHHHHHHHHHHHHTCCSS--SCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCB
T ss_pred HHHHHHH----HHhccCCCCHHHHHHHHHHHHHhhcccc--CCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCc
Confidence 0000000 00000000000 0000000000000 000000000000 0 01
Q ss_pred HHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 240 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
..+.+.++++|+|+|+|++|.++| ...+.+.+.+ +++++++++++||++++++| +++.+.|.+||.++..+
T Consensus 255 ~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i--p~~~~~~i~~~gH~~~~e~p----~~~~~~i~~FL~~~~~~ 325 (330)
T 3nwo_A 255 VIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI--PDVRSHVFPGTSHCTHLEKP----EEFRAVVAQFLHQHDLA 325 (330)
T ss_dssp CGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHC--SSEEEEEETTCCTTHHHHSH----HHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhC--CCCcEEEeCCCCCchhhcCH----HHHHHHHHHHHHhcccc
Confidence 134567889999999999999876 4677888888 78999999999999996555 67999999999887644
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=231.01 Aligned_cols=251 Identities=17% Similarity=0.173 Sum_probs=162.7
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
+.+| +++|..++. +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.... .++++++++|+.
T Consensus 9 ~~~g~~l~y~~~g~-----~~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl~ 81 (279)
T 1hkh_A 9 NSTPIELYYEDQGS-----GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNT-GYDYDTFAADLH 81 (279)
T ss_dssp TTEEEEEEEEEESS-----SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHHH
T ss_pred CCCCeEEEEEecCC-----CCcEEEEcCCCchhh-HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 4567 899888863 457999999998877 89999999999999999999999999987653 358999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC-CCeeEEEEccCccCCCCC--Cc----hhHHHHHHhhccccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVIPEN--MK----PSKLHLFMYGLLFGL 188 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~il~~~~~~~~~~--~~----~~~~~~~~~~~~~~~ 188 (323)
++++.+..+ +++|+||||||.+++.+|.++|+ + |+++|++++....... .. .......+.......
T Consensus 82 ~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (279)
T 1hkh_A 82 TVLETLDLR------DVVLVGFSMGTGELARYVARYGHER-VAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGD 154 (279)
T ss_dssp HHHHHHTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHhcCCC------ceEEEEeChhHHHHHHHHHHcCccc-eeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhh
Confidence 999998754 89999999999999999999998 7 9999999875432110 00 000000000000000
Q ss_pred ccccccCCCccccc------ccccChhhHHHhhcCCcccCCCCCchhHHHHHHh-hHHHHhcCCcc---cccEEEEeeCC
Q 020630 189 ADTWAAMPDNKMVG------KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-CQYIQDNFSKV---TVPFLTVHGTA 258 (323)
Q Consensus 189 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~P~l~i~g~~ 258 (323)
...........+.. ................ . ............ ..+....+.++ ++|+|+++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~ 229 (279)
T 1hkh_A 155 RFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAI----G-SAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTK 229 (279)
T ss_dssp HHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHH----T-SCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETT
T ss_pred hhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhc----c-CcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCC
Confidence 00000000000000 0000000000000000 0 000000000000 00112234566 99999999999
Q ss_pred CcccCchhH-HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 259 DGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|++.+ +.+.+.+ +++++++++++||++++++ ++++.+.|.+||+
T Consensus 230 D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 230 DNILPIDATARRFHQAV--PEADYVEVEGAPHGLLWTH----ADEVNAALKTFLA 278 (279)
T ss_dssp CSSSCTTTTHHHHHHHC--TTSEEEEETTCCTTHHHHT----HHHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHhC--CCeeEEEeCCCCccchhcC----HHHHHHHHHHHhh
Confidence 999999887 8888887 7899999999999999554 4678999999985
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=223.89 Aligned_cols=250 Identities=14% Similarity=0.077 Sum_probs=163.1
Q ss_pred ceeEEecCCC-cEEEEEecCCCC--CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-cCCCCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-GRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~~ 106 (323)
+...+.+.|| +|+|+.++|.+. +++|+|||+||++++.. .|..+++.|+++||+|+++|+||| |.|++... .++
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~-~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~-~~~ 85 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID-EFT 85 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC---------CCC
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCch-HHHHHHHHHHHCCCEEEEeeCCCCCCCCCCccc-cee
Confidence 4567788899 999999987532 24789999999998877 899999999988999999999999 99976533 358
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++++|+.++++++... + ..+++|+||||||.+|+.+|.+ | + |+++|++++..... ......... .
T Consensus 86 ~~~~~~D~~~~~~~l~~~-~--~~~~~lvGhSmGG~iA~~~A~~-~-~-v~~lvl~~~~~~~~------~~~~~~~~~-~ 152 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTK-G--TQNIGLIAASLSARVAYEVISD-L-E-LSFLITAVGVVNLR------DTLEKALGF-D 152 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--CCCEEEEEETHHHHHHHHHTTT-S-C-CSEEEEESCCSCHH------HHHHHHHSS-C
T ss_pred hHHHHHHHHHHHHHHHhC-C--CCceEEEEECHHHHHHHHHhCc-c-C-cCEEEEecCchhHH------HHHHHHhhh-h
Confidence 899999999999988632 2 4589999999999999999998 6 6 99999987653210 001110000 0
Q ss_pred ccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHH----hhHHHHhcCCcccccEEEEeeCCCccc
Q 020630 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR----VCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.......... .............. +...... ........+.++++|+|+++|++|.++
T Consensus 153 ~~~~~~~~~~--~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 214 (305)
T 1tht_A 153 YLSLPIDELP--NDLDFEGHKLGSEV----------------FVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWV 214 (305)
T ss_dssp GGGSCGGGCC--SEEEETTEEEEHHH----------------HHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTS
T ss_pred hhhcchhhCc--ccccccccccCHHH----------------HHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCcc
Confidence 0000000000 00000000000000 0000000 001123457789999999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|++.++.+++.++.+++++++++++||.++ ++|+ ....+.+.+.+|.....
T Consensus 215 p~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~-~~~~fl~~~~~~~~~~~ 265 (305)
T 1tht_A 215 KQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLV-VLRNFYQSVTKAAIAMD 265 (305)
T ss_dssp CHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHH-HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCch-HHHHHHHHHHHHHHHhC
Confidence 999999998877556789999999999986 6664 34445555555554433
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=229.29 Aligned_cols=254 Identities=16% Similarity=0.170 Sum_probs=165.5
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
..+...+| +++|..+++.+ .|+|||+||++ ++.. .|..+++.|++. |+|+++|+||||.|..+....++++
T Consensus 9 ~~~~~~~g~~l~y~~~g~~g---~p~vvllHG~~~~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~ 83 (285)
T 1c4x_A 9 EKRFPSGTLASHALVAGDPQ---SPAVVLLHGAGPGAHAAS-NWRPIIPDLAEN-FFVVAPDLIGFGQSEYPETYPGHIM 83 (285)
T ss_dssp EEEECCTTSCEEEEEESCTT---SCEEEEECCCSTTCCHHH-HHGGGHHHHHTT-SEEEEECCTTSTTSCCCSSCCSSHH
T ss_pred ceEEEECCEEEEEEecCCCC---CCEEEEEeCCCCCCcchh-hHHHHHHHHhhC-cEEEEecCCCCCCCCCCCCcccchh
Confidence 34455678 99999987532 45699999997 4444 788888889875 9999999999999987654346899
Q ss_pred HH----HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 109 KV----AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 109 ~~----~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++ ++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++........... .......
T Consensus 84 ~~~~~~~~dl~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~--~~~~~~~ 154 (285)
T 1c4x_A 84 SWVGMRVEQILGLMNHFGIE------KSHIVGNSMGGAVTLQLVVEAPER-FDKVALMGSVGAPMNARPPE--LARLLAF 154 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCSSCCHH--HHHHHTG
T ss_pred hhhhhHHHHHHHHHHHhCCC------ccEEEEEChHHHHHHHHHHhChHH-hheEEEeccCCCCCCccchh--HHHHHHH
Confidence 99 99999999998754 899999999999999999999998 99999999865432211111 1111111
Q ss_pred ccccccccccCCCcccccccccChh----hHHHhhcCCcccCCCCCchhHHHHHHhh-------H---HHHhcCCccccc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPE----KLKVIASNPRRYTGKPRVGTMREIARVC-------Q---YIQDNFSKVTVP 250 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~P 250 (323)
+.. +.... ..........+.. ............. .......+.... . .....+.++++|
T Consensus 155 ~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 227 (285)
T 1c4x_A 155 YAD--PRLTP--YRELIHSFVYDPENFPGMEEIVKSRFEVAN---DPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHD 227 (285)
T ss_dssp GGS--CCHHH--HHHHHHTTSSCSTTCTTHHHHHHHHHHHHH---CHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSC
T ss_pred hcc--ccHHH--HHHHHHHhhcCcccccCcHHHHHHHHHhcc---CHHHHHHHHHHhccccccccccccchhhhccCCCC
Confidence 000 00000 0000000000000 0000000000000 000000000000 0 011345778999
Q ss_pred EEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|+|+|++|.++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||.+
T Consensus 228 ~lii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 228 VLVFHGRQDRIVPLDTSLYLTKHL--KHAELVVLDRCGHWAQLERW----DAMGPMLMEHFRA 284 (285)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHC--SSEEEEEESSCCSCHHHHSH----HHHHHHHHHHHHC
T ss_pred EEEEEeCCCeeeCHHHHHHHHHhC--CCceEEEeCCCCcchhhcCH----HHHHHHHHHHHhc
Confidence 999999999999999999999988 78999999999999996554 6789999999863
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=230.52 Aligned_cols=244 Identities=13% Similarity=0.096 Sum_probs=162.2
Q ss_pred CcEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHH-HHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 40 GKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKIC-ISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 40 g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~-~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
.+++|..+++ +++|||+||++ ++.. .|..++ +.|+++ |+|+++|+||||.|+.+....++++++++|+.
T Consensus 23 ~~l~y~~~G~-----g~~vvllHG~~~~~~~~~-~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~ 95 (286)
T 2puj_A 23 FNIHYNEAGN-----GETVIMLHGGGPGAGGWS-NYYRNVGPFVDAG-YRVILKDSPGFNKSDAVVMDEQRGLVNARAVK 95 (286)
T ss_dssp EEEEEEEECC-----SSEEEEECCCSTTCCHHH-HHTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHHH
T ss_pred EEEEEEecCC-----CCcEEEECCCCCCCCcHH-HHHHHHHHHHhcc-CEEEEECCCCCCCCCCCCCcCcCHHHHHHHHH
Confidence 3788888763 46899999997 5544 788888 889876 99999999999999876543468999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc--hhHHHHHHhhcccccccccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 193 (323)
++++.++.+ +++|+||||||.+|+.+|.++|++ |+++|++++......... .............. +...
T Consensus 96 ~~l~~l~~~------~~~lvGhS~GG~va~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 166 (286)
T 2puj_A 96 GLMDALDID------RAHLVGNAMGGATALNFALEYPDR-IGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAE--PSYE 166 (286)
T ss_dssp HHHHHTTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHS--CCHH
T ss_pred HHHHHhCCC------ceEEEEECHHHHHHHHHHHhChHh-hheEEEECccccCCCcccccchhhHHHHHHHhhC--CcHH
Confidence 999998754 899999999999999999999999 999999998753221110 00011111111000 0000
Q ss_pred cCCCccccccc------ccChhhHHHhhcCCcccCCCCCchhHHHHHHh-------hHHHHhcCCcccccEEEEeeCCCc
Q 020630 194 AMPDNKMVGKA------IKDPEKLKVIASNPRRYTGKPRVGTMREIARV-------CQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 194 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
......... ............. .. .......+... ..+....+.++++|+|+|+|++|.
T Consensus 167 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~ 238 (286)
T 2puj_A 167 --TLKQMLQVFLYDQSLITEELLQGRWEAI----QR--QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDR 238 (286)
T ss_dssp --HHHHHHHHHCSCGGGCCHHHHHHHHHHH----HH--CHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCS
T ss_pred --HHHHHHHHHhcCCccCCHHHHHHHHHHh----hc--CHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCC
Confidence 000000000 0000000000000 00 00001111110 001234567889999999999999
Q ss_pred ccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||.+
T Consensus 239 ~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 285 (286)
T 2puj_A 239 FVPLDHGLKLLWNI--DDARLHVFSKCGAWAQWEHA----DEFNRLVIDFLRH 285 (286)
T ss_dssp SSCTHHHHHHHHHS--SSEEEEEESSCCSCHHHHTH----HHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHC--CCCeEEEeCCCCCCccccCH----HHHHHHHHHHHhc
Confidence 99999999999988 78999999999999996554 6789999999864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=229.72 Aligned_cols=264 Identities=16% Similarity=0.143 Sum_probs=170.0
Q ss_pred cceeEEecCCC--cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 30 NGKEYFETPNG--KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g--~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+...+...++ ++.|....+.+ +.+|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|.......+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 97 (315)
T 4f0j_A 20 VHYLDFTSQGQPLSMAYLDVAPKK-ANGRTILLMHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSF 97 (315)
T ss_dssp CEEEEEEETTEEEEEEEEEECCSS-CCSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCH
T ss_pred ceeEEEecCCCCeeEEEeecCCCC-CCCCeEEEEcCCCCcch-HHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCH
Confidence 34445544444 66666665543 56899999999998877 8999999999999999999999999998877656699
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC-------CCchhHHHHH
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE-------NMKPSKLHLF 180 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~-------~~~~~~~~~~ 180 (323)
+++++++.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|+++|...... .....+ ...
T Consensus 98 ~~~~~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~ 169 (315)
T 4f0j_A 98 QQLAANTHALLERLGVA------RASVIGHSMGGMLATRYALLYPRQ-VERLVLVNPIGLEDWKALGVPWRSVDDW-YRR 169 (315)
T ss_dssp HHHHHHHHHHHHHTTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCSSCHHHHTCCCCCHHHH-HHH
T ss_pred HHHHHHHHHHHHHhCCC------ceEEEEecHHHHHHHHHHHhCcHh-hheeEEecCcccCCcccccchhhhhHHH-Hhh
Confidence 99999999999998644 899999999999999999999998 999999998643110 000000 000
Q ss_pred Hhhcc-cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh-----HHHHhcCCcccccEEEE
Q 020630 181 MYGLL-FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 181 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i 254 (323)
..... .......... .... ................................. .+....+.++++|++++
T Consensus 170 ~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii 244 (315)
T 4f0j_A 170 DLQTSAEGIRQYQQAT----YYAG-EWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLL 244 (315)
T ss_dssp HTTCCHHHHHHHHHHH----TSTT-CCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEE
T ss_pred cccCChHHHHHHHHHH----Hhcc-ccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEE
Confidence 00000 0000000000 0000 000000000000000000000000000000000 01223577889999999
Q ss_pred eeCCCcccC----------------chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTC----------------PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 255 ~g~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|++|.++| .+..+.+.+.+ +++++++++++||+.++++ .+++.+.|.+||+++
T Consensus 245 ~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~----p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 245 IGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI--PQATLVEFPDLGHTPQIQA----PERFHQALLEGLQTQ 314 (315)
T ss_dssp EETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHS--TTEEEEEETTCCSCHHHHS----HHHHHHHHHHHHCC-
T ss_pred EecCCCcCccccccccccccccccchhhhhHHHhhc--CCceEEEeCCCCcchhhhC----HHHHHHHHHHHhccC
Confidence 999999999 66677788777 7899999999999999544 477999999998653
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-34 Score=223.89 Aligned_cols=253 Identities=11% Similarity=0.072 Sum_probs=160.3
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC----CCChH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY----LGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~----~~~~~ 108 (323)
.+...+| +++|...+. +|+|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+ .. .++++
T Consensus 12 ~~~~~~g~~l~y~~~G~-----g~~lvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~~~~~~~~~ 83 (294)
T 1ehy_A 12 YEVQLPDVKIHYVREGA-----GPTLLLLHGWPGFWW-EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLNDLSKYSLD 83 (294)
T ss_dssp EEEECSSCEEEEEEEEC-----SSEEEEECCSSCCGG-GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CTTCGGGGCHH
T ss_pred eEEEECCEEEEEEEcCC-----CCEEEEECCCCcchh-hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-ccccccCcCHH
Confidence 3445678 999998872 578999999998876 899999999886 99999999999999876 31 36899
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch-------hHHHHHH
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP-------SKLHLFM 181 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~-------~~~~~~~ 181 (323)
++++|+.++++.++.+ +++|+||||||.+|+.+|.++|++ |+++|++++.......... .+.....
T Consensus 84 ~~a~dl~~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T 1ehy_A 84 KAADDQAALLDALGIE------KAYVVGHDFAAIVLHKFIRKYSDR-VIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFH 156 (294)
T ss_dssp HHHHHHHHHHHHTTCC------CEEEEEETHHHHHHHHHHHHTGGG-EEEEEEECCSCTTC-----------CCHHHHHT
T ss_pred HHHHHHHHHHHHcCCC------CEEEEEeChhHHHHHHHHHhChhh-eeEEEEecCCCCCcchhhccchhccCceEEEec
Confidence 9999999999999755 899999999999999999999999 9999999974321110000 0000000
Q ss_pred hh-cccccccccc---cCCCcccccc------cccChhhHHHhhcCCcccCCCCCchhHHHHHHhh-HHHH-----hcCC
Q 020630 182 YG-LLFGLADTWA---AMPDNKMVGK------AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQ-----DNFS 245 (323)
Q Consensus 182 ~~-~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~ 245 (323)
.. .......... ......+... ............. +...........++... .... ..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (294)
T 1ehy_A 157 QLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDN----CMKPDNIHGGFNYYRANIRPDAALWTDLDHT 232 (294)
T ss_dssp TCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHH----HTSTTHHHHHHHHHHHHSSSSCCCCCTGGGS
T ss_pred CcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHH----hcCCcccchHHHHHHHHHhhhhhhcCCcccC
Confidence 00 0000000000 0000000000 0000000000000 00000000001111110 0000 1233
Q ss_pred cccccEEEEeeCCCcccCc-hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 246 KVTVPFLTVHGTADGVTCP-TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++++|+|+|+|++|.++|. +..+.+.+.+ +++++++++++||++++++| +++++.|.+||
T Consensus 233 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 293 (294)
T 1ehy_A 233 MSDLPVTMIWGLGDTCVPYAPLIEFVPKYY--SNYTMETIEDCGHFLMVEKP----EIAIDRIKTAF 293 (294)
T ss_dssp CBCSCEEEEEECCSSCCTTHHHHHHHHHHB--SSEEEEEETTCCSCHHHHCH----HHHHHHHHHHC
T ss_pred cCCCCEEEEEeCCCCCcchHHHHHHHHHHc--CCCceEEeCCCCCChhhhCH----HHHHHHHHHHh
Confidence 7899999999999999884 5667777777 78999999999999996555 66888888886
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=216.55 Aligned_cols=238 Identities=15% Similarity=0.121 Sum_probs=158.9
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC---hHHHH
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD---MEKVA 111 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~---~~~~~ 111 (323)
...+| +++|..+++. .++|||+||++++....|..+++.|.++||+|+++|+||||.|..... .++ +.+.+
T Consensus 7 ~~~~g~~l~~~~~g~~----~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 81 (254)
T 2ocg_A 7 VAVNGVQLHYQQTGEG----DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDR-DFPADFFERDA 81 (254)
T ss_dssp EEETTEEEEEEEEECC----SEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCC-CCCTTHHHHHH
T ss_pred EEECCEEEEEEEecCC----CCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCC-CCChHHHHHHH
Confidence 34578 9999988752 468999999988733378889999998899999999999999976432 234 66778
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+|+.++++.+.. .+++|+||||||.+|+.+|.++|++ |+++|++++...... .... ....+.... .
T Consensus 82 ~~~~~~l~~l~~------~~~~l~GhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~-----~~~~-~~~~~~~~~-~ 147 (254)
T 2ocg_A 82 KDAVDLMKALKF------KKVSLLGWSDGGITALIAAAKYPSY-IHKMVIWGANAYVTD-----EDSM-IYEGIRDVS-K 147 (254)
T ss_dssp HHHHHHHHHTTC------SSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSBCCH-----HHHH-HHHTTSCGG-G
T ss_pred HHHHHHHHHhCC------CCEEEEEECHhHHHHHHHHHHChHH-hhheeEeccccccCh-----hhHH-HHHHHHHHH-H
Confidence 888888887753 3899999999999999999999999 999999987543221 0000 000000000 0
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh-----HHHHhcCCcccccEEEEeeCCCcccCchh
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
+.... ................. ..+...+.... ......+.++++|+|+++|++|.++|.+.
T Consensus 148 ~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 214 (254)
T 2ocg_A 148 WSERT-RKPLEALYGYDYFARTC------------EKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFH 214 (254)
T ss_dssp SCHHH-HHHHHHHHCHHHHHHHH------------HHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred HHHHh-HHHHHHHhcchhhHHHH------------HHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHH
Confidence 00000 00000000000000000 00000000000 00134567889999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.+.+.+ +++++++++++||+.++++ ++++.+.|.+||
T Consensus 215 ~~~~~~~~--~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl 253 (254)
T 2ocg_A 215 ADFIHKHV--KGSRLHLMPEGKHNLHLRF----ADEFNKLAEDFL 253 (254)
T ss_dssp HHHHHHHS--TTCEEEEETTCCTTHHHHT----HHHHHHHHHHHH
T ss_pred HHHHHHhC--CCCEEEEcCCCCCchhhhC----HHHHHHHHHHHh
Confidence 99999888 7899999999999999544 477889999987
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=226.78 Aligned_cols=253 Identities=18% Similarity=0.200 Sum_probs=158.8
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+...+| +++|..+++.. .+++|||+||++++....|..+ ..+.++||+|+++|+||||.|+.+....++++++++|
T Consensus 9 ~~~~~g~~l~~~~~g~~~--~~~~vvllHG~~~~~~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 85 (293)
T 1mtz_A 9 YAKVNGIYIYYKLCKAPE--EKAKLMTMHGGPGMSHDYLLSL-RDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEE 85 (293)
T ss_dssp EEEETTEEEEEEEECCSS--CSEEEEEECCTTTCCSGGGGGG-GGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHH
T ss_pred EEEECCEEEEEEEECCCC--CCCeEEEEeCCCCcchhHHHHH-HHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHH
Confidence 344578 99999998632 2389999999865544244444 4456779999999999999998765333589999999
Q ss_pred HHHHHHHH-HhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc-cccc
Q 020630 114 SLSFFKHV-RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG-LADT 191 (323)
Q Consensus 114 ~~~~i~~l-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 191 (323)
+.++++.+ ..+ +++|+||||||.+|+.+|.++|++ |+++|++++........ .........+.. ....
T Consensus 86 l~~~~~~l~~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 155 (293)
T 1mtz_A 86 AEALRSKLFGNE------KVFLMGSSYGGALALAYAVKYQDH-LKGLIVSGGLSSVPLTV---KEMNRLIDELPAKYRDA 155 (293)
T ss_dssp HHHHHHHHHTTC------CEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBHHHHH---HHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHhcCCC------cEEEEEecHHHHHHHHHHHhCchh-hheEEecCCccChHHHH---HHHHHHHHhcCHHHHHH
Confidence 99999999 653 899999999999999999999998 99999999865421000 000000000000 0000
Q ss_pred cccCCCcccccccccChhhH----HHhhcCCcccCCCCCchhHHHHHH---------h--------------hHHHHhcC
Q 020630 192 WAAMPDNKMVGKAIKDPEKL----KVIASNPRRYTGKPRVGTMREIAR---------V--------------CQYIQDNF 244 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---------~--------------~~~~~~~~ 244 (323)
.... ............ .+.......... .......... . ..+..+.+
T Consensus 156 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (293)
T 1mtz_A 156 IKKY----GSSGSYENPEYQEAVNYFYHQHLLRSED--WPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKI 229 (293)
T ss_dssp HHHH----HHHTCTTCHHHHHHHHHHHHHHTSCSSC--CCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTG
T ss_pred HHHh----hccCCcChHHHHHHHHHHHHhhcccccC--chHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhh
Confidence 0000 000000000000 000000000000 0000000000 0 00012345
Q ss_pred CcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.++++|+|+|+|++| .+++..++.+.+.+ +++++++++++||++++++| +++.+.|.+||.+
T Consensus 230 ~~i~~P~lii~G~~D-~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 230 SAIKIPTLITVGEYD-EVTPNVARVIHEKI--AGSELHVFRDCSHLTMWEDR----EGYNKLLSDFILK 291 (293)
T ss_dssp GGCCSCEEEEEETTC-SSCHHHHHHHHHHS--TTCEEEEETTCCSCHHHHSH----HHHHHHHHHHHHT
T ss_pred ccCCCCEEEEeeCCC-CCCHHHHHHHHHhC--CCceEEEeCCCCCCccccCH----HHHHHHHHHHHHh
Confidence 678999999999999 67788888888888 78999999999999996554 6789999999975
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=229.24 Aligned_cols=250 Identities=18% Similarity=0.154 Sum_probs=163.2
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
.+...+| +++|...+. +++|||+||++ ++.. .|..+++.|++. |+|+++|+||||.|. +....+++++
T Consensus 19 ~~~~~~g~~l~y~~~g~-----g~~vvllHG~~~~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~~~~~~~~ 90 (296)
T 1j1i_A 19 RFVNAGGVETRYLEAGK-----GQPVILIHGGGAGAESEG-NWRNVIPILARH-YRVIAMDMLGFGKTA-KPDIEYTQDR 90 (296)
T ss_dssp EEEEETTEEEEEEEECC-----SSEEEEECCCSTTCCHHH-HHTTTHHHHTTT-SEEEEECCTTSTTSC-CCSSCCCHHH
T ss_pred eEEEECCEEEEEEecCC-----CCeEEEECCCCCCcchHH-HHHHHHHHHhhc-CEEEEECCCCCCCCC-CCCCCCCHHH
Confidence 3444578 999998763 46899999997 4444 788888889876 999999999999998 5443468999
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc----
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL---- 185 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~---- 185 (323)
+++|+.++++.+.. ..+++|+||||||.+|+.+|.++|++ |+++|++++.......... ...+....
T Consensus 91 ~~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~ 161 (296)
T 1j1i_A 91 RIRHLHDFIKAMNF-----DGKVSIVGNSMGGATGLGVSVLHSEL-VNALVLMGSAGLVVEIHED---LRPIINYDFTRE 161 (296)
T ss_dssp HHHHHHHHHHHSCC-----SSCEEEEEEHHHHHHHHHHHHHCGGG-EEEEEEESCCBCCCC-------------CCSCHH
T ss_pred HHHHHHHHHHhcCC-----CCCeEEEEEChhHHHHHHHHHhChHh-hhEEEEECCCCCCCCCCch---HHHHhcccCCch
Confidence 99999999998864 13899999999999999999999999 9999999987532211100 00000000
Q ss_pred --cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHH------HHhcCCcccccEEEEeeC
Q 020630 186 --FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY------IQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~l~i~g~ 257 (323)
......... .... ............. ........+......... ....+.++++|+|+|+|+
T Consensus 162 ~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~ 231 (296)
T 1j1i_A 162 GMVHLVKALTN--DGFK----IDDAMINSRYTYA----TDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 231 (296)
T ss_dssp HHHHHHHHHSC--TTCC----CCHHHHHHHHHHH----HSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHHHHHHHhcc--Cccc----ccHHHHHHHHHHh----hCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEEC
Confidence 000000000 0000 0000000000000 000000001111110000 112457789999999999
Q ss_pred CCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|.++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||.++..
T Consensus 232 ~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 232 DDKVVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHP----EDFANATLSFLSLRVD 284 (296)
T ss_dssp TCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSH----HHHHHHHHHHHHHC--
T ss_pred CCcccCHHHHHHHHHHC--CCCEEEEECCCCCCchhcCH----HHHHHHHHHHHhccCC
Confidence 99999999999999988 78899999999999996554 6799999999987763
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=225.11 Aligned_cols=239 Identities=16% Similarity=0.091 Sum_probs=152.2
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+......++++++++|+.++++.+.. ..++
T Consensus 8 ~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~ 81 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW-IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPP-----DEKV 81 (264)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCT-----TCCE
T ss_pred CCCCeEEEECCCccccc-hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCC-----CCCe
Confidence 45789999999997765 89999999988899999999999999976544446899999999999999852 1389
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc--ccccccc-c--CCCcccccccccC
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF--GLADTWA-A--MPDNKMVGKAIKD 207 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~--~~~~~~~~~~~~~ 207 (323)
+|+||||||.+++.+|.++|++ |+++|++++.......... .....+..... .+..... . ...... ......
T Consensus 82 ~lvGhSmGG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (264)
T 2wfl_A 82 VLLGHSFGGMSLGLAMETYPEK-ISVAVFMSAMMPDPNHSLT-YPFEKYNEKCPADMMLDSQFSTYGNPENPG-MSMILG 158 (264)
T ss_dssp EEEEETTHHHHHHHHHHHCGGG-EEEEEEESSCCCCTTSCTT-HHHHHHHHHSCTTTTTTCEEEEESCTTSCE-EEEECC
T ss_pred EEEEeChHHHHHHHHHHhChhh-hceeEEEeeccCCCCcchh-hHHHHhhhcCcchhhhhhhhhhccCCCCCc-chhhhh
Confidence 9999999999999999999999 9999999875321111111 11111111000 0000000 0 000000 000000
Q ss_pred hhh-HHHhhcCCc--------ccCCCCCchhHHHHHHhhHHHHhcC---CcccccEEEEeeCCCcccCchhHHHHHHHhc
Q 020630 208 PEK-LKVIASNPR--------RYTGKPRVGTMREIARVCQYIQDNF---SKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275 (323)
Q Consensus 208 ~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 275 (323)
... ......... .... ........+ .. ...+ ...++|+++|+|++|.++|++.++.+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~----~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~- 231 (264)
T 2wfl_A 159 PQFMALKMFQNCSVEDLELAKMLTR-PGSLFFQDL-AK----AKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV- 231 (264)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCC-CEECCHHHH-TT----SCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH-
T ss_pred HHHHHHHHhcCCCHHHHHHHHhccC-CCccccccc-cc----ccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC-
Confidence 000 000000000 0000 000000000 00 0111 114789999999999999999999999988
Q ss_pred CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 276 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++++++++||++++|+| +++++.|.+|+.
T Consensus 232 -p~~~~~~i~~~gH~~~~e~P----~~~~~~l~~f~~ 263 (264)
T 2wfl_A 232 -GADKVKEIKEADHMGMLSQP----REVCKCLLDISD 263 (264)
T ss_dssp -CCSEEEEETTCCSCHHHHSH----HHHHHHHHHHHC
T ss_pred -CCceEEEeCCCCCchhhcCH----HHHHHHHHHHhh
Confidence 78999999999999996665 668888888874
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=226.55 Aligned_cols=127 Identities=14% Similarity=0.209 Sum_probs=107.2
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCC--C-CCC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI--R-CYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~--~-~~~ 104 (323)
......+...+| +++|..++. +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+ . ...
T Consensus 9 ~~~~~~~~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~ 82 (328)
T 2cjp_A 9 KKIEHKMVAVNGLNMHLAELGE-----GPTILFIHGFPELWY-SWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSK 82 (328)
T ss_dssp CCCEEEEEEETTEEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGG
T ss_pred hhhheeEecCCCcEEEEEEcCC-----CCEEEEECCCCCchH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCccc
Confidence 334455666788 999998872 579999999998876 899999999888999999999999999865 2 223
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
++++++++|+.++++.++.. ..+++|+||||||.+|+.+|.++|++ |+++|++++..
T Consensus 83 ~~~~~~a~dl~~~l~~l~~~----~~~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvl~~~~~ 139 (328)
T 2cjp_A 83 FSILHLVGDVVALLEAIAPN----EEKVFVVAHDWGALIAWHLCLFRPDK-VKALVNLSVHF 139 (328)
T ss_dssp GSHHHHHHHHHHHHHHHCTT----CSSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCC
T ss_pred ccHHHHHHHHHHHHHHhcCC----CCCeEEEEECHHHHHHHHHHHhChhh-eeEEEEEccCC
Confidence 58999999999999999721 22899999999999999999999999 99999998654
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=222.08 Aligned_cols=255 Identities=14% Similarity=0.109 Sum_probs=165.7
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
..+| +++|...++ +|+|||+||++++.. .|..+++.|.+ +||+|+++|+||||.|..... ++++++++|+
T Consensus 7 ~~~g~~l~y~~~g~-----~~~vv~lhG~~~~~~-~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~ 78 (272)
T 3fsg_A 7 YLTRSNISYFSIGS-----GTPIIFLHGLSLDKQ-STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP--STSDNVLETL 78 (272)
T ss_dssp EECTTCCEEEEECC-----SSEEEEECCTTCCHH-HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS--CSHHHHHHHH
T ss_pred EecCCeEEEEEcCC-----CCeEEEEeCCCCcHH-HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC--CCHHHHHHHH
Confidence 3467 999998873 578999999998877 88888888887 699999999999999987766 5999999999
Q ss_pred HHHHHH-HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc-ccccccc
Q 020630 115 LSFFKH-VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-FGLADTW 192 (323)
Q Consensus 115 ~~~i~~-l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 192 (323)
.++++. +.. .+++++||||||.+|+.+|.++|++ |+++|+++|............ ...... ..+....
T Consensus 79 ~~~l~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 148 (272)
T 3fsg_A 79 IEAIEEIIGA------RRFILYGHSYGGYLAQAIAFHLKDQ-TLGVFLTCPVITADHSKRLTG---KHINILEEDINPVE 148 (272)
T ss_dssp HHHHHHHHTT------CCEEEEEEEHHHHHHHHHHHHSGGG-EEEEEEEEECSSCCGGGCCCC---CCCCEECSCCCCCT
T ss_pred HHHHHHHhCC------CcEEEEEeCchHHHHHHHHHhChHh-hheeEEECcccccCccccccc---cchhhhhhhhhccc
Confidence 999999 543 3899999999999999999999998 999999998754221100000 000000 0000000
Q ss_pred ccCCCccccccc-ccChhhHHHhhcCCcccCCCCCchhHHHHHH---hhHHHHhcCCcccccEEEEeeCCCcccCchhHH
Q 020630 193 AAMPDNKMVGKA-IKDPEKLKVIASNPRRYTGKPRVGTMREIAR---VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 193 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
.......+.... .........+..................+.. ........+.++++|+++++|++|.++|++..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 228 (272)
T 3fsg_A 149 NKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQL 228 (272)
T ss_dssp TGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHH
T ss_pred CHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHH
Confidence 000000000000 0000000000000000000000000000000 000112245788999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 269 LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+.+ +++++++++++||++++++ ++++.+.|.+||++..
T Consensus 229 ~~~~~~--~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 229 KLINHN--ENGEIVLLNRTGHNLMIDQ----REAVGFHFDLFLDELN 269 (272)
T ss_dssp HHHTTC--TTEEEEEESSCCSSHHHHT----HHHHHHHHHHHHHHHH
T ss_pred HHHHhc--CCCeEEEecCCCCCchhcC----HHHHHHHHHHHHHHhh
Confidence 999888 7899999999999999544 5779999999998764
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=222.19 Aligned_cols=258 Identities=13% Similarity=0.195 Sum_probs=161.3
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~~~ 108 (323)
++.++.+.+| +++|..+++.+ ++++|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+... ...++++
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~--~~~~vvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 81 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI--SRPPVLCLPGLTRNAR-DFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQPM 81 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT--TSCCEEEECCTTCCGG-GGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSGGGCSHH
T ss_pred ccCeeecCCCceEEEEEcCCCC--CCCcEEEECCCCcchh-hHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCccccCHH
Confidence 4566788899 99999998753 3678999999998876 89999999987 7999999999999998654 2345899
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
++++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++..... ... ...........
T Consensus 82 ~~a~dl~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~----~~~-~~~~~~~~~~~ 149 (285)
T 3bwx_A 82 QYLQDLEALLAQEGIE------RFVAIGTSLGGLLTMLLAAANPAR-IAAAVLNDVGPEVS----PEG-LERIRGYVGQG 149 (285)
T ss_dssp HHHHHHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCC----HHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCC------ceEEEEeCHHHHHHHHHHHhCchh-eeEEEEecCCcccC----cch-hHHHHHHhcCC
Confidence 9999999999998754 899999999999999999999999 99999987533211 000 00000000000
Q ss_pred --ccccccC--CCccccccc---ccChhhH----HHhhcCCcc---cCCCCCc-hhHHHH--HHhhHHHHhcCCcc-ccc
Q 020630 189 --ADTWAAM--PDNKMVGKA---IKDPEKL----KVIASNPRR---YTGKPRV-GTMREI--ARVCQYIQDNFSKV-TVP 250 (323)
Q Consensus 189 --~~~~~~~--~~~~~~~~~---~~~~~~~----~~~~~~~~~---~~~~~~~-~~~~~~--~~~~~~~~~~~~~~-~~P 250 (323)
...+... ......... ....... ......... ....... ..+... .....+....+.++ ++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 229 (285)
T 3bwx_A 150 RNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRP 229 (285)
T ss_dssp CEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSC
T ss_pred cccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCC
Confidence 0000000 000000000 0000000 000000000 0000000 000000 00000000112233 799
Q ss_pred EEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|+|+|++|.+++++..+.+.+. +++++++++++||++++++| +.+ +.|.+||+
T Consensus 230 ~lii~G~~D~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p----~~~-~~i~~fl~ 283 (285)
T 3bwx_A 230 LLVLRGETSDILSAQTAAKMASR---PGVELVTLPRIGHAPTLDEP----ESI-AAIGRLLE 283 (285)
T ss_dssp EEEEEETTCSSSCHHHHHHHHTS---TTEEEEEETTCCSCCCSCSH----HHH-HHHHHHHT
T ss_pred eEEEEeCCCCccCHHHHHHHHhC---CCcEEEEeCCCCccchhhCc----hHH-HHHHHHHH
Confidence 99999999999999888877665 67899999999999997666 334 57888985
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=231.95 Aligned_cols=245 Identities=16% Similarity=0.203 Sum_probs=158.8
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+++|...|. +++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+....++++++++|+.++++.
T Consensus 7 ~~~y~~~G~-----g~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~ 79 (269)
T 2xmz_A 7 KFYEANVET-----NQVLVFLHGFLSDSR-TYHNHIEKFTDN-YHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK 79 (269)
T ss_dssp EEECCSSCC-----SEEEEEECCTTCCGG-GGTTTHHHHHTT-SEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGG
T ss_pred eEEEEEcCC-----CCeEEEEcCCCCcHH-HHHHHHHHHhhc-CeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Confidence 555555442 457999999999877 888899999875 9999999999999987644245899999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH---HHhhcc-----ccccccc
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL---FMYGLL-----FGLADTW 192 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~ 192 (323)
+..+ +++|+||||||.+|+.+|.++|++ |+++|++++............... .....+ ..+...+
T Consensus 80 l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (269)
T 2xmz_A 80 YKDK------SITLFGYSMGGRVALYYAINGHIP-ISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDW 152 (269)
T ss_dssp GTTS------EEEEEEETHHHHHHHHHHHHCSSC-CSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCC------cEEEEEECchHHHHHHHHHhCchh-eeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHH
Confidence 8644 899999999999999999999998 999999997654322110000000 000000 0000000
Q ss_pred ccCCCccccccc-ccChhhH-HHhhcCCcccCCCCCchhHHHHHHh-----hHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 193 AAMPDNKMVGKA-IKDPEKL-KVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 193 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
.. ...+... ..+.... ....... . ............ ..+..+.+.++++|+++|+|++|.+++.+
T Consensus 153 ~~---~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 224 (269)
T 2xmz_A 153 EK---LPLFQSQLELPVEIQHQIRQQRL---S--QSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQI 224 (269)
T ss_dssp TT---SGGGGGGGGSCHHHHHHHHHHHH---T--SCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHH
T ss_pred Hh---CccccccccCCHHHHHHHHHHHh---c--cCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHH
Confidence 00 0000000 0011000 0100000 0 000000111110 00123456788999999999999999887
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+ +.+.+ +++++++++++||++++++| +++.+.|.+||++.
T Consensus 225 ~~~-~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 225 AKK-MANLI--PNSKCKLISATGHTIHVEDS----DEFDTMILGFLKEE 266 (269)
T ss_dssp HHH-HHHHS--TTEEEEEETTCCSCHHHHSH----HHHHHHHHHHHHHH
T ss_pred HHH-HHhhC--CCcEEEEeCCCCCChhhcCH----HHHHHHHHHHHHHh
Confidence 755 77777 78999999999999996554 67999999999764
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=214.86 Aligned_cols=229 Identities=13% Similarity=0.201 Sum_probs=151.8
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|.... ..++++++++|+.++++.+.... ..+++|
T Consensus 16 ~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~-~~~~~~~~~~d~~~~~~~l~~~~---~~~~~l 90 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEEL-VHTGPDDWWQDVMNGYEFLKNKG---YEKIAV 90 (247)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHH-TTCCHHHHHHHHHHHHHHHHHHT---CCCEEE
T ss_pred CcEEEEECCCCCChH-HHHHHHHHHHHCCCEEEecccCCCCCCHHHh-cCCCHHHHHHHHHHHHHHHHHcC---CCeEEE
Confidence 578999999998877 7999999998889999999999999775321 22478888888877666665432 348999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+||||||.+|+.+|.++| |+++|+++++..... ..............+.... . ..........
T Consensus 91 vG~SmGG~ia~~~a~~~p---v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~ 153 (247)
T 1tqh_A 91 AGLSLGGVFSLKLGYTVP---IEGIVTMCAPMYIKS---EETMYEGVLEYAREYKKRE--G---------KSEEQIEQEM 153 (247)
T ss_dssp EEETHHHHHHHHHHTTSC---CSCEEEESCCSSCCC---HHHHHHHHHHHHHHHHHHH--T---------CCHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHhCC---CCeEEEEcceeecCc---chhhhHHHHHHHHHhhccc--c---------cchHHHHhhh
Confidence 999999999999999988 889998765433211 1100000100000000000 0 0000000111
Q ss_pred hcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccccc
Q 020630 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
..... . .......+.....+..+.+.++++|+|+|+|++|.++|++.++.+.+.+++.++++++++++||.++++
T Consensus 154 ~~~~~-~----~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 154 EKFKQ-T----PMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHTT-S----CCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGS
T ss_pred hcccC-C----CHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccC
Confidence 00000 0 011111222222345677889999999999999999999999999999844347999999999999965
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 020630 295 EPDENANLVLKDMREWIDE 313 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~ 313 (323)
++ ++++.+.|.+||++
T Consensus 229 ~~---~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 229 QE---KDQLHEDIYAFLES 244 (247)
T ss_dssp TT---HHHHHHHHHHHHHH
T ss_pred cc---HHHHHHHHHHHHHh
Confidence 42 46799999999975
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=228.21 Aligned_cols=262 Identities=15% Similarity=0.132 Sum_probs=171.6
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
+.+..++. .+| +++|..+++++ +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|..... .+++
T Consensus 9 ~~~~~~~~-~~g~~l~~~~~g~~~---~~~vl~lHG~~~~~~-~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~-~~~~ 81 (299)
T 3g9x_A 9 PFDPHYVE-VLGERMHYVDVGPRD---GTPVLFLHGNPTSSY-LWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDL-DYFF 81 (299)
T ss_dssp CCCCEEEE-ETTEEEEEEEESCSS---SCCEEEECCTTCCGG-GGTTTHHHHTT-TSCEEEECCTTSTTSCCCCC-CCCH
T ss_pred ccceeeee-eCCeEEEEEecCCCC---CCEEEEECCCCccHH-HHHHHHHHHcc-CCEEEeeCCCCCCCCCCCCC-cccH
Confidence 33444444 477 99999998754 779999999998877 88889999965 89999999999999987665 4589
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+++++|+.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++....................+..
T Consensus 82 ~~~~~~~~~~~~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (299)
T 3g9x_A 82 DDHVRYLDAFIEALGLE------EVVLVIHDWGSALGFHWAKRNPER-VKGIACMEFIRPFPTWDEWPEFARETFQAFRT 154 (299)
T ss_dssp HHHHHHHHHHHHHTTCC------SEEEEEEHHHHHHHHHHHHHSGGG-EEEEEEEEECCCBSSGGGSCGGGHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCC------cEEEEEeCccHHHHHHHHHhcchh-eeEEEEecCCcchhhhhhcchHHHHHHHHHcC
Confidence 99999999999998643 899999999999999999999998 99999998554332111000000000000000
Q ss_pred c-ccccccCCCcc----ccc----ccccChhhHHHhhcCCcccCCCCCchhHH-------------HHHHhhHHHHhcCC
Q 020630 188 L-ADTWAAMPDNK----MVG----KAIKDPEKLKVIASNPRRYTGKPRVGTMR-------------EIARVCQYIQDNFS 245 (323)
Q Consensus 188 ~-~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 245 (323)
. ........... ... ................ ......... .......+....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 230 (299)
T 3g9x_A 155 ADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFL----KPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLH 230 (299)
T ss_dssp SSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGS----SGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHH
T ss_pred CCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhc----cccccchhhhhhhhhhhccccchhhhhhhhhhhhcc
Confidence 0 00000000000 000 0000000001000000 000000111 11111223445567
Q ss_pred cccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|+++++|++|.++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+|+.+.
T Consensus 231 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 231 QSPVPKLLFWGTPGVLIPPAEAARLAESL--PNCKTVDIGPGLHYLQEDNP----DLIGSEIARWLPAL 293 (299)
T ss_dssp HCCSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCHHHHCH----HHHHHHHHHHSGGG
T ss_pred cCCCCeEEEecCCCCCCCHHHHHHHHhhC--CCCeEEEeCCCCCcchhcCH----HHHHHHHHHHHhhh
Confidence 88999999999999999999999999998 78999999999999996555 56778887776543
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=220.44 Aligned_cols=242 Identities=14% Similarity=0.078 Sum_probs=152.8
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++.+.. .|..+++.|+++||+|+++|+||||.|+......++++++++|+.++++.+.. ..+++|
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~l 76 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP-----GEKVIL 76 (257)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCT-----TCCEEE
T ss_pred CCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccc-----cCCeEE
Confidence 578999999997765 89999999988899999999999999976544446899999999999998841 238999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCC--cccccccccChhh-H
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD--NKMVGKAIKDPEK-L 211 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~ 211 (323)
+||||||.+++.+|.++|++ |+++|++++........... ..................... ............. .
T Consensus 77 vGhSmGG~va~~~a~~~p~~-v~~lVl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 3c6x_A 77 VGESCGGLNIAIAADKYCEK-IAAAVFHNSVLPDTEHCPSY-VVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLR 154 (257)
T ss_dssp EEEETHHHHHHHHHHHHGGG-EEEEEEEEECCCCSSSCTTH-HHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHH
T ss_pred EEECcchHHHHHHHHhCchh-hheEEEEecccCCCCCcchh-HHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHH
Confidence 99999999999999999999 99999998753211111111 111111100000000000000 0000000000000 0
Q ss_pred HHhhc-CC-------cccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEE
Q 020630 212 KVIAS-NP-------RRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 212 ~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
..... .. ..... ........+.. .... ......++|+|+|+|++|.++|++.++.+.+.+ +++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--~~~~~~~ 229 (257)
T 3c6x_A 155 ENLYTLCGPEEYELAKMLTR-KGSLFQNILAK-RPFF-TKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDKVYK 229 (257)
T ss_dssp HHTSTTSCHHHHHHHHHHCC-CBCCCHHHHHH-SCCC-CTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS--CCSEEEE
T ss_pred HHHhcCCCHHHHHHHHHhcC-CCccchhhhcc-cccc-ChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC--CCCeEEE
Confidence 00000 00 00000 00000000000 0000 001113789999999999999999999999988 7899999
Q ss_pred ecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 284 YDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++||++++++| +++++.|.+|+++
T Consensus 230 i~~~gH~~~~e~P----~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 230 VEGGDHKLQLTKT----KEIAEILQEVADT 255 (257)
T ss_dssp CCSCCSCHHHHSH----HHHHHHHHHHHHH
T ss_pred eCCCCCCcccCCH----HHHHHHHHHHHHh
Confidence 9999999996555 6688889999864
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=219.72 Aligned_cols=242 Identities=14% Similarity=0.050 Sum_probs=154.5
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+......++++++++|+.++++.+.. ..+++|
T Consensus 4 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~l 77 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSA-----DEKVIL 77 (273)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCS-----SSCEEE
T ss_pred CCeEEEECCCCCCcc-hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhcc-----CCCEEE
Confidence 679999999997765 89999999988899999999999999986544446899999999999998852 138999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc--cccccc-cCCCc-ccccccccChhh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG--LADTWA-AMPDN-KMVGKAIKDPEK 210 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~-~~~~~~~~~~~~ 210 (323)
+||||||.+++.+|.++|++ |+++|++++........... ....+...... +..... ..... ............
T Consensus 78 vGhSmGG~va~~~a~~~P~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T 1xkl_A 78 VGHSLGGMNLGLAMEKYPQK-IYAAVFLAAFMPDSVHNSSF-VLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF 155 (273)
T ss_dssp EEETTHHHHHHHHHHHCGGG-EEEEEEESCCCCCSSSCTTH-HHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHH
T ss_pred EecCHHHHHHHHHHHhChHh-heEEEEEeccCCCCCCcHHH-HHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHH
Confidence 99999999999999999999 99999998753221111111 11111111000 000000 00000 000000000000
Q ss_pred -HHHhhcC-C-------cccCCCCCchhHHHHHHhhHHHHhcC---CcccccEEEEeeCCCcccCchhHHHHHHHhcCCC
Q 020630 211 -LKVIASN-P-------RRYTGKPRVGTMREIARVCQYIQDNF---SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD 278 (323)
Q Consensus 211 -~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 278 (323)
....... . ..... ........+.. ...+ ...++|+++|+|++|.++|++.++.+.+.+ ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--p~ 227 (273)
T 1xkl_A 156 LAHKLYQLCSPEDLALASSLVR-PSSLFMEDLSK-----AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GV 227 (273)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCC-CBCCCHHHHHH-----CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH--CC
T ss_pred HHHHhhccCCHHHHHHHHHhcC-CCchhhhhhhc-----ccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC--CC
Confidence 0000000 0 00000 00000000000 0111 124789999999999999999999999988 78
Q ss_pred CcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++++++++||++++++| +++++.|.+|+++...
T Consensus 228 ~~~~~i~~aGH~~~~e~P----~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 228 TEAIEIKGADHMAMLCEP----QKLCASLLEIAHKYNM 261 (273)
T ss_dssp SEEEEETTCCSCHHHHSH----HHHHHHHHHHHHHCC-
T ss_pred CeEEEeCCCCCCchhcCH----HHHHHHHHHHHHHhcc
Confidence 899999999999996555 6699999999986543
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=220.21 Aligned_cols=249 Identities=13% Similarity=0.047 Sum_probs=158.4
Q ss_pred EecCCC-cEEEEEe--cCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHH
Q 020630 35 FETPNG-KLFTQSF--LPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 35 ~~~~~g-~l~~~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
+...+| +++|..+ +. + +|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.+.. .+++++++
T Consensus 8 ~~~~~g~~l~y~~~~~G~-~---~p~vvllHG~~~~~~-~w~~~~~~L~~-~~rvia~DlrGhG~S~~~~~-~~~~~~~a 80 (276)
T 2wj6_A 8 ETLVFDNKLSYIDNQRDT-D---GPAILLLPGWCHDHR-VYKYLIQELDA-DFRVIVPNWRGHGLSPSEVP-DFGYQEQV 80 (276)
T ss_dssp EEEETTEEEEEEECCCCC-S---SCEEEEECCTTCCGG-GGHHHHHHHTT-TSCEEEECCTTCSSSCCCCC-CCCHHHHH
T ss_pred EEeeCCeEEEEEEecCCC-C---CCeEEEECCCCCcHH-HHHHHHHHHhc-CCEEEEeCCCCCCCCCCCCC-CCCHHHHH
Confidence 345678 9999988 52 2 579999999998877 89999999986 59999999999999986533 46899999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
+|+.++++.++.+ +++|+||||||.+|+.+|.++ |++ |+++|++++...... ... ......... ..
T Consensus 81 ~dl~~ll~~l~~~------~~~lvGhSmGG~va~~~A~~~~P~r-v~~lvl~~~~~~~~~---~~~-~~~~~~~~~--~~ 147 (276)
T 2wj6_A 81 KDALEILDQLGVE------TFLPVSHSHGGWVLVELLEQAGPER-APRGIIMDWLMWAPK---PDF-AKSLTLLKD--PE 147 (276)
T ss_dssp HHHHHHHHHHTCC------SEEEEEEGGGHHHHHHHHHHHHHHH-SCCEEEESCCCSSCC---HHH-HHHHHHHHC--TT
T ss_pred HHHHHHHHHhCCC------ceEEEEECHHHHHHHHHHHHhCHHh-hceEEEecccccCCC---chH-HHHhhhccC--cc
Confidence 9999999999865 899999999999999999999 999 999999987532111 111 000000000 00
Q ss_pred ccccCCCcccccc---cccChhhHHHhhcCCcccCCCCCchhHHHHHHhh----H---HHHhcCCcccccEEEEeeCCCc
Q 020630 191 TWAAMPDNKMVGK---AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC----Q---YIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 191 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
.+... ....... ..........+..... . ............. . .....+..+++|+++++|..|.
T Consensus 148 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~ 222 (276)
T 2wj6_A 148 RWREG-THGLFDVWLDGHDEKRVRHHLLEEMA---D-YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQP 222 (276)
T ss_dssp THHHH-HHHHHHHHHTTBCCHHHHHHHHTTTT---T-CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCS
T ss_pred hHHHH-HHHHHHHhhcccchHHHHHHHHHHhh---h-cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCc
Confidence 00000 0000000 0011111111111110 0 0000000000000 0 0123456788999998874332
Q ss_pred ccC--chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 261 VTC--PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 261 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+ ....+.+.+.+ +++++++++++||++++|+| +++++.|.+||.+.
T Consensus 223 ~~~~~~~~~~~~~~~~--p~a~~~~i~~~gH~~~~e~P----~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 223 TEPEYEKINSDFAEQH--PWFSYAKLGGPTHFPAIDVP----DRAAVHIREFATAI 272 (276)
T ss_dssp CSHHHHHHHHHHHHHC--TTEEEEECCCSSSCHHHHSH----HHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhhC--CCeEEEEeCCCCCcccccCH----HHHHHHHHHHHhhc
Confidence 222 23445667777 78999999999999996554 77999999999754
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=219.35 Aligned_cols=251 Identities=14% Similarity=0.128 Sum_probs=165.8
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
..++.+.+| +++|..+++ +|+|||+||++++.. .|..+++.|+ +||+|+++|+||||.|+... .++++++
T Consensus 4 ~~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~--~~~~~~~ 74 (262)
T 3r0v_A 4 MQTVPSSDGTPIAFERSGS-----GPPVVLVGGALSTRA-GGAPLAERLA-PHFTVICYDRRGRGDSGDTP--PYAVERE 74 (262)
T ss_dssp -CEEECTTSCEEEEEEEEC-----SSEEEEECCTTCCGG-GGHHHHHHHT-TTSEEEEECCTTSTTCCCCS--SCCHHHH
T ss_pred hheEEcCCCcEEEEEEcCC-----CCcEEEECCCCcChH-HHHHHHHHHh-cCcEEEEEecCCCcCCCCCC--CCCHHHH
Confidence 345778889 999999874 568999999998887 8999999998 78999999999999998775 3589999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch--hHHHHHHhhccccc
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SKLHLFMYGLLFGL 188 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 188 (323)
++|+.++++.+. . +++++|||+||.+++.+|.++| + |+++|+++|.......... ......+...+...
T Consensus 75 ~~~~~~~~~~l~-~------~~~l~G~S~Gg~ia~~~a~~~p-~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (262)
T 3r0v_A 75 IEDLAAIIDAAG-G------AAFVFGMSSGAGLSLLAAASGL-P-ITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEG 145 (262)
T ss_dssp HHHHHHHHHHTT-S------CEEEEEETHHHHHHHHHHHTTC-C-EEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC-C------CeEEEEEcHHHHHHHHHHHhCC-C-cceEEEEcCCcccccccchhhhHHHHHHHHHhhcc
Confidence 999999999986 3 8999999999999999999999 7 9999999987665432211 00111111110000
Q ss_pred ccccccCCCcccccc-cccChhhHHHhhcCCccc-C--CCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 189 ADTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRY-T--GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
. .......+... .................. . .....................+.++++|+++++|++|.++|+
T Consensus 146 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 222 (262)
T 3r0v_A 146 R---RGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIR 222 (262)
T ss_dssp C---HHHHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHH
T ss_pred c---hhhHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCH
Confidence 0 00000000000 000011111111000000 0 000000000000000001345677899999999999999999
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.++.+.+.+ +++++++++++||+ ++ ++++.+.|.+||+
T Consensus 223 ~~~~~~~~~~--~~~~~~~~~~~gH~---~~----p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 223 HTAQELADTI--PNARYVTLENQTHT---VA----PDAIAPVLVEFFT 261 (262)
T ss_dssp HHHHHHHHHS--TTEEEEECCCSSSS---CC----HHHHHHHHHHHHC
T ss_pred HHHHHHHHhC--CCCeEEEecCCCcc---cC----HHHHHHHHHHHHh
Confidence 9999999998 78899999999993 33 4778999999985
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=226.46 Aligned_cols=257 Identities=14% Similarity=0.108 Sum_probs=165.8
Q ss_pred eeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCChHHH
Q 020630 32 KEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGDMEKV 110 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~~~~~ 110 (323)
+.++...+++++|...+. +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+... ...++++++
T Consensus 5 ~~~~~~~~~~~~y~~~g~-----~~~vv~~HG~~~~~~-~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 77 (278)
T 3oos_A 5 TNIIKTPRGKFEYFLKGE-----GPPLCVTHLYSEYND-NGNTFANPFTD-HYSVYLVNLKGCGNSDSAKNDSEYSMTET 77 (278)
T ss_dssp EEEEEETTEEEEEEEECS-----SSEEEECCSSEECCT-TCCTTTGGGGG-TSEEEEECCTTSTTSCCCSSGGGGSHHHH
T ss_pred cCcEecCCceEEEEecCC-----CCeEEEEcCCCcchH-HHHHHHHHhhc-CceEEEEcCCCCCCCCCCCCcccCcHHHH
Confidence 344444333999998773 679999999998877 78888888987 8999999999999998764 234589999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch-------hHHHHHHhh
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP-------SKLHLFMYG 183 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~-------~~~~~~~~~ 183 (323)
++|+.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|++++.......... .........
T Consensus 78 ~~~~~~~~~~l~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (278)
T 3oos_A 78 IKDLEAIREALYIN------KWGFAGHSAGGMLALVYATEAQES-LTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVS 150 (278)
T ss_dssp HHHHHHHHHHTTCS------CEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHH
T ss_pred HHHHHHHHHHhCCC------eEEEEeecccHHHHHHHHHhCchh-hCeEEEecCccccccccccchhhhhhchhHHHHHH
Confidence 99999999998644 899999999999999999999998 9999999987651100000 000000111
Q ss_pred cccccccccccCCC-----cccccccccChhhHHHhhcCCcccCCCCCchhHHHHHH--h--hHHHHhcCCcccccEEEE
Q 020630 184 LLFGLADTWAAMPD-----NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR--V--CQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 184 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~P~l~i 254 (323)
.+..+......... ....................... ..........+. . ..+....+.++++|++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 227 (278)
T 3oos_A 151 IMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNS---GKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIY 227 (278)
T ss_dssp HHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCC---CEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEE
T ss_pred HHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhcccc---chhHHHHHHHhhhcccccccHHHHHhCCCCCEEEE
Confidence 11100000000000 00000000011111111111100 001101111111 0 001234457889999999
Q ss_pred eeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+|++|.++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||
T Consensus 228 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl 278 (278)
T 3oos_A 228 CGKHDVQCPYIFSCEIANLI--PNATLTKFEESNHNPFVEEI----DKFNQFVNDTL 278 (278)
T ss_dssp EETTCSSSCHHHHHHHHHHS--TTEEEEEETTCSSCHHHHSH----HHHHHHHHHTC
T ss_pred EeccCCCCCHHHHHHHHhhC--CCcEEEEcCCcCCCcccccH----HHHHHHHHhhC
Confidence 99999999999999999988 78999999999999996555 66888887774
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-36 Score=233.66 Aligned_cols=258 Identities=16% Similarity=0.119 Sum_probs=169.4
Q ss_pred cceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC--CCCCCh
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR--CYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~--~~~~~~ 107 (323)
.+..++.+.+|+++|+.+++. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|.... ...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~----~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 77 (279)
T 4g9e_A 3 INYHELETSHGRIAVRESEGE----GAPLLMIHGNSSSGA-IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSM 77 (279)
T ss_dssp CEEEEEEETTEEEEEEECCCC----EEEEEEECCTTCCGG-GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSH
T ss_pred eEEEEEEcCCceEEEEecCCC----CCeEEEECCCCCchh-HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCH
Confidence 355677777779988887653 789999999998877 8999998866679999999999999998752 223489
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+++++|+.++++.+... +++++||||||.+|+.+|.++|+ +.++|++++......... .........
T Consensus 78 ~~~~~~~~~~~~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~--~~~~vl~~~~~~~~~~~~-----~~~~~~~~~ 144 (279)
T 4g9e_A 78 EGYADAMTEVMQQLGIA------DAVVFGWSLGGHIGIEMIARYPE--MRGLMITGTPPVAREEVG-----QGFKSGPDM 144 (279)
T ss_dssp HHHHHHHHHHHHHHTCC------CCEEEEETHHHHHHHHHTTTCTT--CCEEEEESCCCCCGGGHH-----HHBCCSTTG
T ss_pred HHHHHHHHHHHHHhCCC------ceEEEEECchHHHHHHHHhhCCc--ceeEEEecCCCCCCCccc-----hhhccchhh
Confidence 99999999999998643 89999999999999999999998 788888776543221100 000000000
Q ss_pred cccccccCCCc----cccccccc---ChhhHHHhhcCCcccCCCCCchhHHHHHHhh-----HHHHhcCCcccccEEEEe
Q 020630 188 LADTWAAMPDN----KMVGKAIK---DPEKLKVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 188 ~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~ 255 (323)
.. ........ .+...... ............ ........... .+....+.++++|+++++
T Consensus 145 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 215 (279)
T 4g9e_A 145 AL-AGQEIFSERDVESYARSTCGEPFEASLLDIVARTD--------GRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVN 215 (279)
T ss_dssp GG-GGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSC--------HHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEE
T ss_pred hh-cCcccccHHHHHHHHHhhccCcccHHHHHHHHhhh--------ccchHHHHHHhhccCCchHHHHHHhcCCCEEEEE
Confidence 00 00000000 00000000 000000000000 00000000000 011233567799999999
Q ss_pred eCCCcccCchhHHHHH-HHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhcCC
Q 020630 256 GTADGVTCPTSSKLLY-EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCGP 320 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~~ 320 (323)
|++|.++|++..+.+. +.+ +++++++++++||+.++++ ++++.+.|.+||++..+....
T Consensus 216 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~----p~~~~~~i~~fl~~~~~~~~~ 275 (279)
T 4g9e_A 216 GRDEPFVELDFVSKVKFGNL--WEGKTHVIDNAGHAPFREA----PAEFDAYLARFIRDCTQLEHH 275 (279)
T ss_dssp ETTCSSBCHHHHTTCCCSSB--GGGSCEEETTCCSCHHHHS----HHHHHHHHHHHHHHHHSSCCC
T ss_pred cCCCcccchHHHHHHhhccC--CCCeEEEECCCCcchHHhC----HHHHHHHHHHHHHHhhhhhhh
Confidence 9999999998887776 555 6789999999999999544 477999999999998765544
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=219.74 Aligned_cols=243 Identities=12% Similarity=0.035 Sum_probs=158.2
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+....++++++++|+.++++.+.. ..+++|
T Consensus 4 g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~l 77 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW-IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPE-----NEEVIL 77 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCT-----TCCEEE
T ss_pred CCcEEEECCCCCccc-cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcc-----cCceEE
Confidence 489999999998877 88999999999999999999999999987655556999999999999999854 248999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccccc---CCCcccccccccChhhH
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA---MPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 211 (323)
+||||||.+++.+|.++|++ |+++|++++........... ...........+...... .................
T Consensus 78 vGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (258)
T 3dqz_A 78 VGFSFGGINIALAADIFPAK-IKVLVFLNAFLPDTTHVPSH-VLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMK 155 (258)
T ss_dssp EEETTHHHHHHHHHTTCGGG-EEEEEEESCCCCCSSSCTTH-HHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHH
T ss_pred EEeChhHHHHHHHHHhChHh-hcEEEEecCCCCCCCCcchH-HHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHH
Confidence 99999999999999999998 99999999865433322211 111111100000000000 00000000000000000
Q ss_pred HHhhcCCc--------ccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEE
Q 020630 212 KVIASNPR--------RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 212 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
........ .... .... +........ ........++|+++++|++|.++|++.++.+.+.+ +++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 230 (258)
T 3dqz_A 156 ARLYQNCPIEDYELAKMLHR-QGSF-FTEDLSKKE-KFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF--NVSKVYE 230 (258)
T ss_dssp HHTSTTSCHHHHHHHHHHCC-CEEC-CHHHHHTSC-CCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS--CCSCEEE
T ss_pred HHhhccCCHHHHHHHHHhcc-CCch-hhhhhhccc-cccccccccCCEEEEECCCCeeeCHHHHHHHHHhC--CcccEEE
Confidence 00000000 0000 0000 000000000 01112233799999999999999999999999998 7789999
Q ss_pred ecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++||++++++| +++.+.|.+|+++.
T Consensus 231 ~~~~gH~~~~~~p----~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 231 IDGGDHMVMLSKP----QKLFDSLSAIATDY 257 (258)
T ss_dssp ETTCCSCHHHHSH----HHHHHHHHHHHHHT
T ss_pred cCCCCCchhhcCh----HHHHHHHHHHHHHh
Confidence 9999999996555 66888899998764
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=228.06 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=154.2
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC---CCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR---CYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
+|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ...++++++++|+.++++.+..+ +
T Consensus 20 ~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~------~ 91 (271)
T 1wom_A 20 KASIMFAPGFGCDQS-VWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLK------E 91 (271)
T ss_dssp SSEEEEECCTTCCGG-GGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCS------C
T ss_pred CCcEEEEcCCCCchh-hHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCC------C
Confidence 579999999998876 88888888977 5999999999999998643 22247899999999999998754 8
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC------chhHHHHHHhhcccccccccccCCCcccccccc
Q 020630 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM------KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++|+||||||.+|+.+|.++|++ |+++|++++........ ........+...+......+........... .
T Consensus 92 ~~lvGhS~GG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 169 (271)
T 1wom_A 92 TVFVGHSVGALIGMLASIRRPEL-FSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQ-P 169 (271)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCC-T
T ss_pred eEEEEeCHHHHHHHHHHHhCHHh-hcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcC-C
Confidence 99999999999999999999999 99999998753211000 0000000000000000000000000000000 0
Q ss_pred cChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEE
Q 020630 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
..+.....+...... ............ ..+....+.++++|+++|+|++|.++|.+..+.+.+.+ +++++++
T Consensus 170 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~ 243 (271)
T 1wom_A 170 DRPEIKEELESRFCS----TDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL--PYSSLKQ 243 (271)
T ss_dssp TCHHHHHHHHHHHHH----SCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS--SSEEEEE
T ss_pred CchHHHHHHHHHHhc----CCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC--CCCEEEE
Confidence 000000000000000 000000001000 00122346788999999999999999999999898888 7799999
Q ss_pred ecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++||++++++| +++.+.|.+|++++
T Consensus 244 i~~~gH~~~~e~p----~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 244 MEARGHCPHMSHP----DETIQLIGDYLKAH 270 (271)
T ss_dssp EEEESSCHHHHCH----HHHHHHHHHHHHHH
T ss_pred eCCCCcCccccCH----HHHHHHHHHHHHhc
Confidence 9999999996554 67899999999865
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=221.10 Aligned_cols=257 Identities=16% Similarity=0.119 Sum_probs=167.6
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCChHHHH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGDMEKVA 111 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~~~~~~ 111 (323)
.+...+| +++|..+++.+ +|+||++||++++.. .|..+++.|.++||+|+++|+||+|.|.... ...+++++++
T Consensus 7 ~~~~~~g~~l~~~~~g~~~---~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (286)
T 3qit_A 7 KFLEFGGNQICLCSWGSPE---HPVVLCIHGILEQGL-AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82 (286)
T ss_dssp EEEEETTEEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHH
T ss_pred heeecCCceEEEeecCCCC---CCEEEEECCCCcccc-hHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHH
Confidence 3445577 99999998754 789999999998877 8999999999999999999999999998765 2345899999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH--HHHHHhhcccccc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK--LHLFMYGLLFGLA 189 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 189 (323)
+|+.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|++++............ ........+....
T Consensus 83 ~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (286)
T 3qit_A 83 AQIDRVIQELPDQ------PLLLVGHSMGAMLATAIASVRPKK-IKELILVELPLPAEESKKESAVNQLTTCLDYLSSTP 155 (286)
T ss_dssp HHHHHHHHHSCSS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhcCCC------CEEEEEeCHHHHHHHHHHHhChhh-ccEEEEecCCCCCccccchhhhHHHHHHHHHHhccc
Confidence 9999999988643 899999999999999999999998 999999998876554331111 1111111111000
Q ss_pred cccccCCCcc---cc---cccccChhhHHHhhcCCc----ccCC-CCCchhHHHHHH------hhHHHHhcCCcccccEE
Q 020630 190 DTWAAMPDNK---MV---GKAIKDPEKLKVIASNPR----RYTG-KPRVGTMREIAR------VCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 190 ~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~P~l 252 (323)
.......... .. .................. .... ............ ...+....+.++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 235 (286)
T 3qit_A 156 QHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTT 235 (286)
T ss_dssp CCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEE
T ss_pred cccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCCeE
Confidence 0000000000 00 000000111111111100 0000 000000000000 12224455677899999
Q ss_pred EEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHH
Q 020630 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
+++|++|.++|.+..+.+.+.+ ++++++++++ ||++++++| +++.+.|.
T Consensus 236 ~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~g-gH~~~~e~p----~~~~~~i~ 284 (286)
T 3qit_A 236 LVYGDSSKLNRPEDLQQQKMTM--TQAKRVFLSG-GHNLHIDAA----AALASLIL 284 (286)
T ss_dssp EEEETTCCSSCHHHHHHHHHHS--TTSEEEEESS-SSCHHHHTH----HHHHHHHH
T ss_pred EEEeCCCcccCHHHHHHHHHHC--CCCeEEEeeC-CchHhhhCh----HHHHHHhh
Confidence 9999999999999999999988 7889999999 999997666 44555443
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=219.87 Aligned_cols=247 Identities=13% Similarity=0.044 Sum_probs=162.9
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..+++++ +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+. ..++++++++|+.
T Consensus 5 ~~~g~~l~~~~~g~~~---~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~~~ 78 (264)
T 3ibt_A 5 NVNGTLMTYSESGDPH---APTLFLLSGWCQDHR-LFKNLAPLLARD-FHVICPDWRGHDAKQTDS-GDFDSQTLAQDLL 78 (264)
T ss_dssp EETTEECCEEEESCSS---SCEEEEECCTTCCGG-GGTTHHHHHTTT-SEEEEECCTTCSTTCCCC-SCCCHHHHHHHHH
T ss_pred eeCCeEEEEEEeCCCC---CCeEEEEcCCCCcHh-HHHHHHHHHHhc-CcEEEEccccCCCCCCCc-cccCHHHHHHHHH
Confidence 3477 99999998754 789999999999887 899999999764 999999999999998763 3458999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccc-ccccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL-ADTWA 193 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 193 (323)
++++.+..+ +++++||||||.+++.+|.++ |++ |+++|++++.. .. .... ...+....... .....
T Consensus 79 ~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~-~~---~~~~-~~~~~~~~~~~~~~~~~ 146 (264)
T 3ibt_A 79 AFIDAKGIR------DFQMVSTSHGCWVNIDVCEQLGAAR-LPKTIIIDWLL-QP---HPGF-WQQLAEGQHPTEYVAGR 146 (264)
T ss_dssp HHHHHTTCC------SEEEEEETTHHHHHHHHHHHSCTTT-SCEEEEESCCS-SC---CHHH-HHHHHHTTCTTTHHHHH
T ss_pred HHHHhcCCC------ceEEEecchhHHHHHHHHHhhChhh-hheEEEecCCC-Cc---Chhh-cchhhcccChhhHHHHH
Confidence 999998644 899999999999999999999 998 99999999877 11 1111 11111110000 00000
Q ss_pred cCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh----H---HHHhcCCcccccEEEEee--CCCcccCc
Q 020630 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC----Q---YIQDNFSKVTVPFLTVHG--TADGVTCP 264 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~P~l~i~g--~~D~~~~~ 264 (323)
......+... ...+.....+....... ....+....... . .....+.++++|+++++| +.|...+.
T Consensus 147 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~ 221 (264)
T 3ibt_A 147 QSFFDEWAET-TDNADVLNHLRNEMPWF----HGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYR 221 (264)
T ss_dssp HHHHHHHHTT-CCCHHHHHHHHHTGGGS----CHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHH
T ss_pred HHHHHHhccc-CCcHHHHHHHHHhhhhc----cchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhH
Confidence 0000000000 01111112221111110 001111111111 0 022566788999999965 44445556
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+..+.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 222 ~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~ 263 (264)
T 3ibt_A 222 QLQLEFAAGH--SWFHPRHIPGRTHFPSLENP----VAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHHHHC--TTEEEEECCCSSSCHHHHCH----HHHHHHHHHHTC
T ss_pred HHHHHHHHhC--CCceEEEcCCCCCcchhhCH----HHHHHHHHHHHh
Confidence 6777788877 78899999999999996555 668888999875
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-34 Score=225.97 Aligned_cols=263 Identities=8% Similarity=0.070 Sum_probs=163.2
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+...+| +++|...++.. +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+....++++++++
T Consensus 24 ~~~~~~g~~l~y~~~G~g~---~~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~GhG~S~~~~~~~~~~~~~a~ 98 (318)
T 2psd_A 24 KQMNVLDSFINYYDSEKHA---ENAVIFLHGNATSSY-LWRHVVPHIEPV-ARCIIPDLIGMGKSGKSGNGSYRLLDHYK 98 (318)
T ss_dssp EEEEETTEEEEEEECCSCT---TSEEEEECCTTCCGG-GGTTTGGGTTTT-SEEEEECCTTSTTCCCCTTSCCSHHHHHH
T ss_pred eEEeeCCeEEEEEEcCCCC---CCeEEEECCCCCcHH-HHHHHHHHhhhc-CeEEEEeCCCCCCCCCCCCCccCHHHHHH
Confidence 3455678 99999887532 579999999998876 888899888875 89999999999999876444468999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC---CC-CchhHHHHHHhhcc-cc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP---EN-MKPSKLHLFMYGLL-FG 187 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~---~~-~~~~~~~~~~~~~~-~~ 187 (323)
|+.++++.+.. ..+++|+||||||.+|+.+|.++|++ |+++|++++..... .. .........+.... ..
T Consensus 99 dl~~ll~~l~~-----~~~~~lvGhSmGg~ia~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (318)
T 2psd_A 99 YLTAWFELLNL-----PKKIIFVGHDWGAALAFHYAYEHQDR-IKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEK 172 (318)
T ss_dssp HHHHHHTTSCC-----CSSEEEEEEEHHHHHHHHHHHHCTTS-EEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHH
T ss_pred HHHHHHHhcCC-----CCCeEEEEEChhHHHHHHHHHhChHh-hheEEEeccccCCccchhhhhhHHHHHHHHhcccchh
Confidence 99999998864 13899999999999999999999999 99999987542211 00 00001011000000 00
Q ss_pred c-cc--ccccCCCcccccccccChhhHHHhhcCCcc---------c-CCCCCch-hHHHHHHhhHHHHhcCCcc-cccEE
Q 020630 188 L-AD--TWAAMPDNKMVGKAIKDPEKLKVIASNPRR---------Y-TGKPRVG-TMREIARVCQYIQDNFSKV-TVPFL 252 (323)
Q Consensus 188 ~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~P~l 252 (323)
. .. .+............................ + ....... ...............+.++ ++|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~L 252 (318)
T 2psd_A 173 MVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKL 252 (318)
T ss_dssp HHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEE
T ss_pred hhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeE
Confidence 0 00 000000000000000000000000000000 0 0000000 0011111112233445677 99999
Q ss_pred EEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+|++| ++++ .++.+.+.+ ++.+++++ ++||++++++| +++.+.|.+||.+...
T Consensus 253 vi~G~~D-~~~~-~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p----~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 253 FIESDPG-FFSN-AIVEGAKKF--PNTEFVKV-KGLHFLQEDAP----DEMGKYIKSFVERVLK 307 (318)
T ss_dssp EEEEEEC-SSHH-HHHHHHTTS--SSEEEEEE-EESSSGGGTCH----HHHHHHHHHHHHHHHC
T ss_pred EEEeccc-cCcH-HHHHHHHhC--CCcEEEEe-cCCCCCHhhCH----HHHHHHHHHHHHHhhc
Confidence 9999999 8887 777888777 67888888 68999996555 6799999999987643
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=224.36 Aligned_cols=257 Identities=14% Similarity=0.071 Sum_probs=166.3
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
+..+...+| +++|..++. +|+|||+||++++.. .|..+++.|+++ |+|+++|+||||.|..+. ..++++++
T Consensus 11 ~~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~-~~~~~~~~ 82 (301)
T 3kda_A 11 ESAYREVDGVKLHYVKGGQ-----GPLVMLVHGFGQTWY-EWHQLMPELAKR-FTVIAPDLPGLGQSEPPK-TGYSGEQV 82 (301)
T ss_dssp EEEEEEETTEEEEEEEEES-----SSEEEEECCTTCCGG-GGTTTHHHHTTT-SEEEEECCTTSTTCCCCS-SCSSHHHH
T ss_pred ceEEEeeCCeEEEEEEcCC-----CCEEEEECCCCcchh-HHHHHHHHHHhc-CeEEEEcCCCCCCCCCCC-CCccHHHH
Confidence 344556688 999999982 679999999998876 899999999988 999999999999998763 34589999
Q ss_pred HhhHHHHHHHHHhhCCCCCCC-EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc----------hhHHHH
Q 020630 111 AASSLSFFKHVRHSEPYRDLP-AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK----------PSKLHL 179 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~----------~~~~~~ 179 (323)
++|+.++++.+..+ + ++|+||||||.+++.+|.++|++ |+++|++++......... ..+...
T Consensus 83 ~~~l~~~l~~l~~~------~p~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (301)
T 3kda_A 83 AVYLHKLARQFSPD------RPFDLVAHDIGIWNTYPMVVKNQAD-IARLVYMEAPIPDARIYRFPAFTAQGESLVWHFS 155 (301)
T ss_dssp HHHHHHHHHHHCSS------SCEEEEEETHHHHTTHHHHHHCGGG-EEEEEEESSCCSSGGGGGSBSEETTEECSSTHHH
T ss_pred HHHHHHHHHHcCCC------ccEEEEEeCccHHHHHHHHHhChhh-ccEEEEEccCCCCCCccchhhhcchhhhhhhhHH
Confidence 99999999999754 5 99999999999999999999998 999999998643211100 000000
Q ss_pred HH---hhcccccccccccCCCcccccc------cccChhhHHHhhcCCcccCCCCCchhHHHHHHh-------hHHHHhc
Q 020630 180 FM---YGLLFGLADTWAAMPDNKMVGK------AIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-------CQYIQDN 243 (323)
Q Consensus 180 ~~---~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 243 (323)
.. ......+...........+... .............. ............+.. .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T 3kda_A 156 FFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSY----AKPHSLNASFEYYRALNESVRQNAELAKT 231 (301)
T ss_dssp HHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHH----TSHHHHHHHHHHHHTHHHHHHHHHHHTTS
T ss_pred HhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHh----ccccccchHHHHHHhhccchhhcccchhh
Confidence 00 0000000000000000000000 00000000000000 000000111111111 1112233
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.++++|+++++|++| ++......+.+.+ +++++++++++||++++++| +++.+.|.+|+++.-
T Consensus 232 l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 232 RLQMPTMTLAGGGAGG--MGTFQLEQMKAYA--EDVEGHVLPGCGHWLPEECA----APMNRLVIDFLSRGR 295 (301)
T ss_dssp CBCSCEEEEEECSTTS--CTTHHHHHHHTTB--SSEEEEEETTCCSCHHHHTH----HHHHHHHHHHHTTSC
T ss_pred ccccCcceEEEecCCC--CChhHHHHHHhhc--ccCeEEEcCCCCcCchhhCH----HHHHHHHHHHHhhCc
Confidence 4489999999999999 6777778887777 78999999999999995554 779999999998743
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-33 Score=219.19 Aligned_cols=258 Identities=15% Similarity=0.110 Sum_probs=158.6
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC----CCC
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY----LGD 106 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~----~~~ 106 (323)
+..+...+| +++|..++. +|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|+..... .++
T Consensus 14 ~~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 86 (306)
T 3r40_A 14 GSEWINTSSGRIFARVGGD-----GPPLLLLHGFPQTHV-MWHRVAPKLAE-RFKVIVADLPGYGWSDMPESDEQHTPYT 86 (306)
T ss_dssp EEEEECCTTCCEEEEEEEC-----SSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCCTTCGGGS
T ss_pred ceEEEEeCCEEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCCcccCCCC
Confidence 344555677 999999872 679999999998877 88999999988 899999999999999877653 458
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCC--CchhHHHH----H
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN--MKPSKLHL----F 180 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~--~~~~~~~~----~ 180 (323)
++++++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ........ .
T Consensus 87 ~~~~~~~~~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T 3r40_A 87 KRAMAKQLIEAMEQLGHV------HFALAGHNRGARVSYRLALDSPGR-LSKLAVLDILPTYEYWQRMNRAYALKIYHWS 159 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCHHHHHHHCSHHHHHHSTHHH
T ss_pred HHHHHHHHHHHHHHhCCC------CEEEEEecchHHHHHHHHHhChhh-ccEEEEecCCCCccchhhhhhhhhhhhHHHH
Confidence 999999999999998644 899999999999999999999998 9999999974321100 00000000 0
Q ss_pred HhhcccccccccccCCCcccc----c--------ccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--------HH
Q 020630 181 MYGLLFGLADTWAAMPDNKMV----G--------KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--------YI 240 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 240 (323)
....................+ . .............. +............+.... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
T 3r40_A 160 FLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIA----FADPMRRHVMCEDYRAGAYADFEHDKID 235 (306)
T ss_dssp HHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHH----HTSHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHH----HccCCCcchhhHHHHhcccccchhhhhh
Confidence 000000000000000000000 0 00000000000000 000000000011111100 00
Q ss_pred HhcCCcccccEEEEeeCCCcccC-chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 241 QDNFSKVTVPFLTVHGTADGVTC-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
...+.++++|+++|+|++|.+++ ......+.+.. +++++.++ ++||+.++++ ++++.+.|.+||++.
T Consensus 236 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~-~~gH~~~~e~----p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 236 VEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWA--SDVQGAPI-ESGHFLPEEA----PDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHTCCBCSCEEEEEETTCC------CHHHHHHHB--SSEEEEEE-SSCSCHHHHS----HHHHHHHHHHHHHC-
T ss_pred hhhccCCCcceEEEEecCCcccCchhHHHHHHhhc--CCCeEEEe-cCCcCchhhC----hHHHHHHHHHHHHhc
Confidence 12568899999999999999998 45555555555 67888888 6899999544 477999999999864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=213.97 Aligned_cols=245 Identities=14% Similarity=0.082 Sum_probs=159.0
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.++|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+......++++++++|+.++++.+.. ..++
T Consensus 10 ~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~ 83 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-CWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPA-----NEKI 83 (267)
T ss_dssp CCCCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCT-----TSCE
T ss_pred CCCCeEEEECCCCCCcc-hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCC-----CCCE
Confidence 45899999999998877 89999999999899999999999999988765556999999999999999831 3489
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc-ccccc--CCCcccccccccChh
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA-DTWAA--MPDNKMVGKAIKDPE 209 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~ 209 (323)
+|+||||||.+++.+|.++|++ |+++|++++............ ..........+. ..+.. ...............
T Consensus 84 ~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (267)
T 3sty_A 84 ILVGHALGGLAISKAMETFPEK-ISVAVFLSGLMPGPNIDATTV-CTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKF 161 (267)
T ss_dssp EEEEETTHHHHHHHHHHHSGGG-EEEEEEESCCCCBTTBCHHHH-HHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHH
T ss_pred EEEEEcHHHHHHHHHHHhChhh-cceEEEecCCCCCCcchHHHH-HHHhcccchhhhhhhhhhhhhhhcccchhhhhHHH
Confidence 9999999999999999999998 999999998765433221111 111100000000 00000 000000000000000
Q ss_pred hHHHhhcCCc--------ccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcE
Q 020630 210 KLKVIASNPR--------RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI 281 (323)
Q Consensus 210 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
.......... .............+.... ........++|+++|+|++|.+++++..+.+.+.+ +++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~ 237 (267)
T 3sty_A 162 LATNVYHLSPIEDLALATALVRPLYLYLAEDISKEV--VLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN--PPDEV 237 (267)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHC--CCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS--CCSEE
T ss_pred HHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcch--hcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC--CCceE
Confidence 0000000000 000000000000010000 01111223699999999999999999999999998 77999
Q ss_pred EEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 282 KIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 282 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++++||++++++| +++.+.|.+|+++
T Consensus 238 ~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 265 (267)
T 3sty_A 238 KEIEGSDHVTMMSKP----QQLFTTLLSIANK 265 (267)
T ss_dssp EECTTCCSCHHHHSH----HHHHHHHHHHHHH
T ss_pred EEeCCCCccccccCh----HHHHHHHHHHHHh
Confidence 999999999996555 6788999999875
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=222.10 Aligned_cols=257 Identities=11% Similarity=0.080 Sum_probs=170.2
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC---CCCh
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY---LGDM 107 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~---~~~~ 107 (323)
...+...+| +++|..+++ +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|...... .+++
T Consensus 9 ~~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (297)
T 2qvb_A 9 QPKYLEIAGKRMAYIDEGK-----GDAIVFQHGNPTSSY-LWRNIMPHLEGL-GRLVACDLIGMGASDKLSPSGPDRYSY 81 (297)
T ss_dssp CCEEEEETTEEEEEEEESS-----SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCH
T ss_pred CceEEEECCEEEEEEecCC-----CCeEEEECCCCchHH-HHHHHHHHHhhc-CeEEEEcCCCCCCCCCCCCccccCcCH
Confidence 344556678 999999874 579999999998876 788888888775 99999999999999865321 1589
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC--ch--hHHHHHHhh
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KP--SKLHLFMYG 183 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~--~~--~~~~~~~~~ 183 (323)
+++++|+.++++.+.. ..+++++||||||.+++.+|.++|++ |+++|++++........ .. ......+..
T Consensus 82 ~~~~~~~~~~l~~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
T 2qvb_A 82 GEQRDFLFALWDALDL-----GDHVVLVLHDWGSALGFDWANQHRDR-VQGIAFMEAIVTPMTWADWPPAVRGVFQGFRS 155 (297)
T ss_dssp HHHHHHHHHHHHHTTC-----CSCEEEEEEEHHHHHHHHHHHHSGGG-EEEEEEEEECCSCBCGGGSCGGGHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCC-----CCceEEEEeCchHHHHHHHHHhChHh-hheeeEeccccCCccCCCCChHHHHHHHHHhc
Confidence 9999999999999864 13899999999999999999999998 99999999876422110 00 000100000
Q ss_pred cccccccccccCCCcccc----c----ccccChhhHHHhhcCCcccCCC-CCchhHHHHHH-------------hhHHHH
Q 020630 184 LLFGLADTWAAMPDNKMV----G----KAIKDPEKLKVIASNPRRYTGK-PRVGTMREIAR-------------VCQYIQ 241 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~ 241 (323)
.. ..........+. . .............. .... ........+.. ...+..
T Consensus 156 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (297)
T 2qvb_A 156 PQ----GEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRP----FVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYR 227 (297)
T ss_dssp TT----HHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGG----GCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHH
T ss_pred cc----chhhhccccHHHHHHHhccccccCCHHHHHHHHHH----hcCcccchhhHHHHHHhccccCCchhhHHHHHHHH
Confidence 00 000000000000 0 00000011111110 0000 01111111111 122334
Q ss_pred hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
..+.++++|+|+++|++|.++|.+..+.+.+.+ ++ +++++ ++||++++++| +++.+.|.+||++....
T Consensus 228 ~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~-~~~~~-~~gH~~~~~~p----~~~~~~i~~fl~~~~~~ 295 (297)
T 2qvb_A 228 SWLEETDMPKLFINAEPGAIITGRIRDYVRSWP--NQ-TEITV-PGVHFVQEDSP----EEIGAAIAQFVRRLRSA 295 (297)
T ss_dssp HHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSS--SE-EEEEE-EESSCGGGTCH----HHHHHHHHHHHHHHHHH
T ss_pred hhcccccccEEEEecCCCCcCCHHHHHHHHHHc--CC-eEEEe-cCccchhhhCH----HHHHHHHHHHHHHHhhc
Confidence 556778999999999999999999999998887 67 89999 99999996554 67999999999887543
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=216.84 Aligned_cols=243 Identities=17% Similarity=0.217 Sum_probs=172.4
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhH
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
...+| +++|.. +.+|+|||+||++++.. .|..+++.|+++||+|+++|+||+|.|..... ..+++++++|+
T Consensus 26 ~~~~g~~~~~~~------g~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~ 97 (270)
T 3rm3_A 26 PVLSGAEPFYAE------NGPVGVLLVHGFTGTPH-SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDME-RTTFHDWVASV 97 (270)
T ss_dssp CCCTTCCCEEEC------CSSEEEEEECCTTCCGG-GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHH-TCCHHHHHHHH
T ss_pred cCCCCCcccccC------CCCeEEEEECCCCCChh-HHHHHHHHHHHCCCEEEEeCCCCCCCCccccc-cCCHHHHHHHH
Confidence 45677 776652 23799999999998877 79999999999999999999999999975332 24899999999
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccccc
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
.++++++... ..+++++|||+||.+++.+|.++|+ |+++|+++|....... .... .... ....+..
T Consensus 98 ~~~i~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~------~~~~-~~~~-~~~~~~~ 163 (270)
T 3rm3_A 98 EEGYGWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD--ICGIVPINAAVDIPAI------AAGM-TGGG-ELPRYLD 163 (270)
T ss_dssp HHHHHHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCSCCHHH------HHHS-CC----CCSEEE
T ss_pred HHHHHHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC--ccEEEEEcceeccccc------ccch-hcch-hHHHHHH
Confidence 9999999854 3389999999999999999999998 9999999987643210 0000 0000 0000000
Q ss_pred CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHh
Q 020630 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 274 (323)
........... ...............+.....+....+.++++|+|+++|++|.++|++.++.+.+.+
T Consensus 164 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~ 231 (270)
T 3rm3_A 164 SIGSDLKNPDV------------KELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI 231 (270)
T ss_dssp CCCCCCSCTTC------------CCCCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHS
T ss_pred HhCccccccch------------HhhcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhc
Confidence 00000000000 000001112233344444445566778889999999999999999999999999998
Q ss_pred cCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 275 SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 275 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++.++++++++++||.++.+.+ .+++.+.|.+||+++.
T Consensus 232 ~~~~~~~~~~~~~gH~~~~~~~---~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 232 SSTEKEIVRLRNSYHVATLDYD---QPMIIERSLEFFAKHA 269 (270)
T ss_dssp CCSSEEEEEESSCCSCGGGSTT---HHHHHHHHHHHHHHHC
T ss_pred CCCcceEEEeCCCCcccccCcc---HHHHHHHHHHHHHhcC
Confidence 5545699999999999996554 3678999999998763
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=232.19 Aligned_cols=261 Identities=15% Similarity=0.172 Sum_probs=170.9
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.....+.+.+| +|+|...+. +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+..... ++++
T Consensus 3 ~i~~~~~~~dG~~l~y~~~G~-----gp~VV~lHG~~~~~~-~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~-~s~~ 75 (456)
T 3vdx_A 3 FITVGQENSTSIDLYYEDHGT-----GVPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTG-YDYD 75 (456)
T ss_dssp EEEEEEETTEEEEEEEEEESS-----SEEEEEECCTTCCGG-GGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSC-CSHH
T ss_pred eEeecccccCCeEEEEEEeCC-----CCEEEEECCCCCcHH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCC-CCHH
Confidence 34455677889 999988872 689999999998877 788899999888999999999999999876543 5899
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCCc-------hhHHHHH
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMK-------PSKLHLF 180 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~~-------~~~~~~~ 180 (323)
++++|+.++++++..+ +++|+||||||.+++.+|..+ |++ |+++|++++......... .......
T Consensus 76 ~~a~dl~~~l~~l~~~------~v~LvGhS~GG~ia~~~aa~~~p~~-v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (456)
T 3vdx_A 76 TFAADLNTVLETLDLQ------DAVLVGFSMGTGEVARYVSSYGTAR-IAAVAFLASLEPFLLKTDDNPDGAAPQEFFDG 148 (456)
T ss_dssp HHHHHHHHHHHHHTCC------SEEEEEEGGGGHHHHHHHHHHCSSS-EEEEEEESCCCSCCBCCSSCCSCSBCHHHHHH
T ss_pred HHHHHHHHHHHHhCCC------CeEEEEECHHHHHHHHHHHhcchhh-eeEEEEeCCcccccccccccccccchHHHHHH
Confidence 9999999999998643 899999999999999999887 777 999999998764321110 0111111
Q ss_pred Hhhccc--------ccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEE
Q 020630 181 MYGLLF--------GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 181 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
+..... .+...+.... .................... ................+....+.++++|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~~l~~i~~PvL 222 (456)
T 3vdx_A 149 IVAAVKADRYAFYTGFFNDFYNLD--ENLGTRISEEAVRNSWNTAA----SGGFFAAAAAPTTWYTDFRADIPRIDVPAL 222 (456)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTTT--TSBTTTBCHHHHHHHHHHHH----TSCTTHHHHGGGGTTCCCTTTSTTCCSCCE
T ss_pred HHHhhhccchHHHHHHHHHHhccc--ccccccccHHHHHHHhhhcc----ccchhhhhhhhhhhhhhHHHHhhhCCCCEE
Confidence 100000 0000000000 00000000000000000000 000000000000000112345678899999
Q ss_pred EEeeCCCcccCch-hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 253 TVHGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++|++|.++|.+ ..+.+.+.+ +++++++++++||++++++| +.+.+.|.+||++.+.
T Consensus 223 iI~G~~D~~vp~~~~~~~l~~~~--~~~~~~~i~gagH~~~~e~p----~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 223 ILHGTGDRTLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHA----EEVNTALLAFLAKALE 281 (456)
T ss_dssp EEEETTCSSSCGGGTHHHHHHHC--TTSEEEEETTCCSCTTTTTH----HHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcCHHHHHHHHHHHC--CCceEEEeCCCCCcchhhCH----HHHHHHHHHHHHHhhc
Confidence 9999999999998 667777766 78999999999999986554 6688888888887664
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-33 Score=220.71 Aligned_cols=255 Identities=16% Similarity=0.198 Sum_probs=166.9
Q ss_pred CccceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-cCCCCCCCCCCC
Q 020630 28 VRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-GRSDGIRCYLGD 106 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~~ 106 (323)
.+.+..++...+|+++|+.+++.+ +|+|||+||++++.. .|..+++.|++ ||+|+++|+||+ |.|..... .++
T Consensus 43 ~~~~~~~v~~~~~~~~~~~~g~~~---~~~vv~lHG~~~~~~-~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~~-~~~ 116 (306)
T 2r11_A 43 VRCKSFYISTRFGQTHVIASGPED---APPLVLLHGALFSST-MWYPNIADWSS-KYRTYAVDIIGDKNKSIPENV-SGT 116 (306)
T ss_dssp SCCEEEEECCTTEEEEEEEESCTT---SCEEEEECCTTTCGG-GGTTTHHHHHH-HSEEEEECCTTSSSSCEECSC-CCC
T ss_pred CCcceEEEecCCceEEEEeeCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEecCCCCCCCCCCCCC-CCC
Confidence 334455555555599999988643 789999999998877 78888899987 899999999999 87765433 358
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|+++|.......... . .........
T Consensus 117 ~~~~~~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~-~-~~~~~~~~~ 187 (306)
T 2r11_A 117 RTDYANWLLDVFDNLGIE------KSHMIGLSLGGLHTMNFLLRMPER-VKSAAILSPAETFLPFHHD-F-YKYALGLTA 187 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSSBTSCCCHH-H-HHHHHTTTS
T ss_pred HHHHHHHHHHHHHhcCCC------ceeEEEECHHHHHHHHHHHhCccc-eeeEEEEcCccccCcccHH-H-HHHHhHHHH
Confidence 999999999999998753 899999999999999999999998 9999999998765332211 1 111110000
Q ss_pred c-cccc---cccCCCcccccccc-cChhhHHHhhcCCcccC-CCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCc
Q 020630 187 G-LADT---WAAMPDNKMVGKAI-KDPEKLKVIASNPRRYT-GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 187 ~-~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
. .... +..... ....... ...............+. ....... ......+.++++|+|+++|++|.
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~i~~P~lii~G~~D~ 258 (306)
T 2r11_A 188 SNGVETFLNWMMNDQ-NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPY--------VFTDEELRSARVPILLLLGEHEV 258 (306)
T ss_dssp TTHHHHHHHHHTTTC-CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSC--------BCCHHHHHTCCSCEEEEEETTCC
T ss_pred HHHHHHHHHHhhCCc-cccccccccccHHHHHHHHhhhhhhhhccCCCC--------CCCHHHHhcCCCCEEEEEeCCCc
Confidence 0 0000 000000 0000000 00000000000000000 0000000 00123356789999999999999
Q ss_pred ccCchhHHHHHH-HhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 261 VTCPTSSKLLYE-KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|++.+..+.+ .+ +++++++++++||++++++ ++++.+.|.+||+
T Consensus 259 ~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 305 (306)
T 2r11_A 259 IYDPHSALHRASSFV--PDIEAEVIKNAGHVLSMEQ----PTYVNERVMRFFN 305 (306)
T ss_dssp SSCHHHHHHHHHHHS--TTCEEEEETTCCTTHHHHS----HHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHC--CCCEEEEeCCCCCCCcccC----HHHHHHHHHHHHh
Confidence 999988875555 45 7899999999999999554 4678899999985
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=236.57 Aligned_cols=270 Identities=15% Similarity=0.120 Sum_probs=179.4
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCCh
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~ 107 (323)
.+..++.+.|| +++|..+++ +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|..... ..+++
T Consensus 237 ~~~~~~~~~dg~~l~~~~~g~-----~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~ 310 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVELGS-----GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCM 310 (555)
T ss_dssp SEEEEEEEETTEEEEEEEECS-----SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSH
T ss_pred cceeEEEeCCCcEEEEEEcCC-----CCEEEEEeCCCCchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccH
Confidence 35677888899 999999873 689999999998876 88999999999999999999999999987653 23578
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH---------
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH--------- 178 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~--------- 178 (323)
+++++|+.++++.+..+ +++++||||||.+|+.+|.++|++ |+++|++++..............
T Consensus 311 ~~~~~d~~~~~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (555)
T 3i28_A 311 EVLCKEMVTFLDKLGLS------QAVFIGHDWGGMLVWYMALFYPER-VRAVASLNTPFIPANPNMSPLESIKANPVFDY 383 (555)
T ss_dssp HHHHHHHHHHHHHHTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCCCTTSCHHHHHHTCGGGHH
T ss_pred HHHHHHHHHHHHHcCCC------cEEEEEecHHHHHHHHHHHhChHh-eeEEEEEccCCCCCCcccchHHHHhcCCccch
Confidence 99999999999998643 899999999999999999999998 99999998876543322211100
Q ss_pred -----------HHHh----hcccccccccccC-----------------CCcccccccccChhhHHHhhcCCcccCCCCC
Q 020630 179 -----------LFMY----GLLFGLADTWAAM-----------------PDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226 (323)
Q Consensus 179 -----------~~~~----~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (323)
.... ..+.......... ......................... .....
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 462 (555)
T 3i28_A 384 QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS-GFRGP 462 (555)
T ss_dssp HHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTT-TTHHH
T ss_pred hHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcc-cchhH
Confidence 0000 0000000000000 0000000000000000000000000 00000
Q ss_pred chhHHHHHH-hhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHH
Q 020630 227 VGTMREIAR-VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLK 305 (323)
Q Consensus 227 ~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 305 (323)
..+...... ........+.++++|+|+++|++|.++|++.++.+.+.+ +++++++++++||+.++++ ++++.+
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~----p~~~~~ 536 (555)
T 3i28_A 463 LNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDK----PTEVNQ 536 (555)
T ss_dssp HHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC--TTCEEEEETTCCSCHHHHS----HHHHHH
T ss_pred HHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC--CCceEEEeCCCCCCcchhC----HHHHHH
Confidence 000000000 011234567789999999999999999999999888888 7899999999999999654 477999
Q ss_pred HHHHHHHHHHhhcC
Q 020630 306 DMREWIDERVERCG 319 (323)
Q Consensus 306 ~i~~fl~~~~~~~~ 319 (323)
.|.+||++......
T Consensus 537 ~i~~fl~~~~~~~~ 550 (555)
T 3i28_A 537 ILIKWLDSDARNPP 550 (555)
T ss_dssp HHHHHHHHHTCC--
T ss_pred HHHHHHHhccCCCC
Confidence 99999998875443
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=213.49 Aligned_cols=242 Identities=18% Similarity=0.193 Sum_probs=166.5
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
.+.|| +++|..+.+.+ .++|+|||+||++++. .|.+..+.+.|.++||+|+++|+||+|.|...... .+++++++|
T Consensus 18 ~~~~g~~l~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~d 95 (270)
T 3llc_A 18 QGSDARSIAALVRAPAQ-DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRD-GTISRWLEE 95 (270)
T ss_dssp SGGGCEEEEEEEECCSS-TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGG-CCHHHHHHH
T ss_pred eccCcceEEEEeccCCC-CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCcccc-ccHHHHHHH
Confidence 44688 99998777653 3489999999999875 33455678888788999999999999999865433 489999999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh---cC---CCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ---SE---PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p---~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+.++++++.. .+++++|||+||.+|+.+|.+ +| ++ |+++|++++....................+.
T Consensus 96 ~~~~~~~l~~------~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (270)
T 3llc_A 96 ALAVLDHFKP------EKAILVGSSMGGWIALRLIQELKARHDNPTQ-VSGMVLIAPAPDFTSDLIEPLLGDRERAELA- 167 (270)
T ss_dssp HHHHHHHHCC------SEEEEEEETHHHHHHHHHHHHHHTCSCCSCE-EEEEEEESCCTTHHHHTTGGGCCHHHHHHHH-
T ss_pred HHHHHHHhcc------CCeEEEEeChHHHHHHHHHHHHHhccccccc-cceeEEecCcccchhhhhhhhhhhhhhhhhh-
Confidence 9999999873 389999999999999999999 99 77 9999999987642211000000000000000
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHH--HHhcCCcccccEEEEeeCCCcccCch
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY--IQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
..........+.. ........+...... ....+.++++|+++++|++|.++|.+
T Consensus 168 -----------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~ 223 (270)
T 3llc_A 168 -----------------------ENGYFEEVSEYSP-EPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQ 223 (270)
T ss_dssp -----------------------HHSEEEECCTTCS-SCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHH
T ss_pred -----------------------ccCcccChhhccc-chhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHH
Confidence 0000000000000 000111111111111 13456788999999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++.+.+.++++++++++++++||.+.. .+..+.+.+.|.+||+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 224 HALKLVEHLPADDVVLTLVRDGDHRLSR---PQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp HHHHHHHTSCSSSEEEEEETTCCSSCCS---HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCCCCeeEEEeCCCcccccc---cccHHHHHHHHHHHhcCC
Confidence 9999999984444899999999996552 466788999999998753
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=225.76 Aligned_cols=277 Identities=14% Similarity=0.114 Sum_probs=177.7
Q ss_pred ceeEEecCCC-cEEEEEecCCC------CCCceEEEEecCCCCCcchhhHHHHHHHh----cCCc---EEEEeccccCcC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISYA----TWGY---AVFAADLLGHGR 96 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~~~~~l~----~~g~---~vi~~d~~G~G~ 96 (323)
.+..+...|| +|+|..+++.+ .+++|+|||+||++++.. .|..+++.|+ +.|| +|+++|+||||.
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~ 99 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGD 99 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHH
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCC
Confidence 4455678899 99999999764 134589999999998877 7888889898 3489 999999999999
Q ss_pred CCCCC----CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCC-
Q 020630 97 SDGIR----CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN- 171 (323)
Q Consensus 97 s~~~~----~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~- 171 (323)
|.... ...+++.++++|+.++++.+....+.+..+++|+||||||.+++.+|.++|++ |+++|+++|.......
T Consensus 100 S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 100 SAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNL-FHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCSCCCCC
T ss_pred CCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchh-eeEEEEecccccccccc
Confidence 97532 23458999999999999986521111123499999999999999999999998 9999999987764210
Q ss_pred ------C------chhHHHHHHhhcccccccccccCCCccccc-c---cccChhhHHHhhcC-----------CcccCCC
Q 020630 172 ------M------KPSKLHLFMYGLLFGLADTWAAMPDNKMVG-K---AIKDPEKLKVIASN-----------PRRYTGK 224 (323)
Q Consensus 172 ------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~-----------~~~~~~~ 224 (323)
. ........+............. ....+. . ...++.....+... ...+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESE--YVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTK 256 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHH--HHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEES
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHH--HHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEec
Confidence 0 0001111111111000000000 000000 0 00011111111000 0000000
Q ss_pred CCchh-HH---HHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhH
Q 020630 225 PRVGT-MR---EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300 (323)
Q Consensus 225 ~~~~~-~~---~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 300 (323)
..... .. .+..........+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||++++++ +
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~--~~~~~~~~~~~gH~~~~e~----p 330 (398)
T 2y6u_A 257 MEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL--QNYHLDVIPGGSHLVNVEA----P 330 (398)
T ss_dssp SCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC--SSEEEEEETTCCTTHHHHS----H
T ss_pred CCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC--CCceEEEeCCCCccchhcC----H
Confidence 00000 00 0000112234567888999999999999999999999999988 7899999999999999654 4
Q ss_pred HHHHHHHHHHHHHHHhh
Q 020630 301 NLVLKDMREWIDERVER 317 (323)
Q Consensus 301 ~~~~~~i~~fl~~~~~~ 317 (323)
+++.+.|.+||.+....
T Consensus 331 ~~~~~~i~~fl~~~~~~ 347 (398)
T 2y6u_A 331 DLVIERINHHIHEFVLT 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 66888889999887654
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=220.64 Aligned_cols=245 Identities=16% Similarity=0.177 Sum_probs=165.0
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+...++ +++|..+++. +|+|||+||++++.. .|..+++.| ||+|+++|+||+|.|.......++.+++++|
T Consensus 64 ~~~~~~~~~~~~~~g~~----~~~vv~~hG~~~~~~-~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~d 135 (330)
T 3p2m_A 64 VERVQAGAISALRWGGS----APRVIFLHGGGQNAH-TWDTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNSET 135 (330)
T ss_dssp EEEEEETTEEEEEESSS----CCSEEEECCTTCCGG-GGHHHHHHS---CCCEEEECCTTSTTSCCCSSCBCCHHHHHHH
T ss_pred ceeecCceEEEEEeCCC----CCeEEEECCCCCccc-hHHHHHHHc---CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHH
Confidence 333455 9999999864 678999999998877 788888877 8999999999999999666556789999999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc-
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW- 192 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (323)
+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++..... .................
T Consensus 136 l~~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~------~~~~~~~~~~~~~~~~~~ 202 (330)
T 3p2m_A 136 LAPVLRELAPG------AEFVVGMSLGGLTAIRLAAMAPDL-VGELVLVDVTPSAL------QRHAELTAEQRGTVALMH 202 (330)
T ss_dssp HHHHHHHSSTT------CCEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCHHHH------HHHHHHTCC---------
T ss_pred HHHHHHHhCCC------CcEEEEECHhHHHHHHHHHhChhh-cceEEEEcCCCccc------hhhhhhhhhhhhhhhhhc
Confidence 99999998644 899999999999999999999999 99999999754311 00000000000000000
Q ss_pred ---ccCCCcccccc------cccChhhHHHhhcCCcc---------cCCCCCchhHHHHHHhhHHHHhcCCcccccEEEE
Q 020630 193 ---AAMPDNKMVGK------AIKDPEKLKVIASNPRR---------YTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 193 ---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
........... ................. +......... ......+.++++|+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~PvLii 275 (330)
T 3p2m_A 203 GEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDF-------AGLWDDVDALSAPITLV 275 (330)
T ss_dssp --CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCH-------HHHHHHHHHCCSCEEEE
T ss_pred CCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCcccc-------HHHHHHHhhCCCCEEEE
Confidence 00000000000 00011111111111000 0000000111 11224456789999999
Q ss_pred eeCCCcccCchhHHHHHHHhcCCCCc-EEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKASSADKS-IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|++|.++|++.++.+.+.+ ++++ +++++++||++++++ ++++.+.|.+||++
T Consensus 276 ~G~~D~~v~~~~~~~l~~~~--~~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 276 RGGSSGFVTDQDTAELHRRA--THFRGVHIVEKSGHSVQSDQ----PRALIEIVRGVLDT 329 (330)
T ss_dssp EETTCCSSCHHHHHHHHHHC--SSEEEEEEETTCCSCHHHHC----HHHHHHHHHHHTTC
T ss_pred EeCCCCCCCHHHHHHHHHhC--CCCeeEEEeCCCCCCcchhC----HHHHHHHHHHHHhc
Confidence 99999999999999999988 7788 999999999999554 46789999999864
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=223.45 Aligned_cols=254 Identities=13% Similarity=0.069 Sum_probs=165.4
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhH-HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
...+| +++|...+. +|+|||+||++++.. .|. .+...|.++||+|+++|+||+|.|..... ++++++++|
T Consensus 28 ~~~~~~~l~y~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~ 99 (293)
T 3hss_A 28 PEFRVINLAYDDNGT-----GDPVVFIAGRGGAGR-TWHPHQVPAFLAAGYRCITFDNRGIGATENAEG--FTTQTMVAD 99 (293)
T ss_dssp TTSCEEEEEEEEECS-----SEEEEEECCTTCCGG-GGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCS--CCHHHHHHH
T ss_pred cccccceEEEEEcCC-----CCEEEEECCCCCchh-hcchhhhhhHhhcCCeEEEEccCCCCCCCCccc--CCHHHHHHH
Confidence 34566 888888772 679999999998876 777 67888888899999999999999976654 489999999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc---c
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA---D 190 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 190 (323)
+.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|++++......... .............. .
T Consensus 100 ~~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 170 (293)
T 3hss_A 100 TAALIETLDIA------PARVVGVSMGAFIAQELMVVAPEL-VSSAVLMATRGRLDRARQ--FFNKAEAELYDSGVQLPP 170 (293)
T ss_dssp HHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCHHHH--HHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHhcCCC------cEEEEeeCccHHHHHHHHHHChHH-HHhhheecccccCChhhh--HHHHHHHHHHhhcccchh
Confidence 99999999643 899999999999999999999998 999999998764332110 00000000000000 0
Q ss_pred ccccC--CCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCCcccccEEEEeeCCCcccCchh
Q 020630 191 TWAAM--PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 191 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
..... ............................ ............ .......+.++++|+++++|++|.++|++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~ 249 (293)
T 3hss_A 171 TYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPI-KSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYL 249 (293)
T ss_dssp HHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCC-CCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHH
T ss_pred hHHHHHHHhhhcccccccccccHHHHHHHHhhccc-cccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHH
Confidence 00000 0000000000000000000000000000 000000000000 000123457789999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.+.+.+ +++++++++++||+.++++| +++.+.|.+||++
T Consensus 250 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~ 290 (293)
T 3hss_A 250 GREVADAL--PNGRYLQIPDAGHLGFFERP----EAVNTAMLKFFAS 290 (293)
T ss_dssp HHHHHHHS--TTEEEEEETTCCTTHHHHSH----HHHHHHHHHHHHT
T ss_pred HHHHHHHC--CCceEEEeCCCcchHhhhCH----HHHHHHHHHHHHh
Confidence 99999988 78999999999999995544 6789999999975
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=215.34 Aligned_cols=244 Identities=14% Similarity=0.099 Sum_probs=157.8
Q ss_pred cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHH-HHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKIC-ISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~-~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
+++|..+++. .++|||+||++ ++.. .|..++ +.|.+. |+|+++|+||||.|+......++++++++|+.+
T Consensus 26 ~l~y~~~g~g----~~~vvllHG~~~~~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 99 (289)
T 1u2e_A 26 RIHFNDCGQG----DETVVLLHGSGPGATGWA-NFSRNIDPLVEAG-YRVILLDCPGWGKSDSVVNSGSRSDLNARILKS 99 (289)
T ss_dssp EEEEEEECCC----SSEEEEECCCSTTCCHHH-HTTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHH
T ss_pred EEEEeccCCC----CceEEEECCCCcccchhH-HHHHhhhHHHhcC-CeEEEEcCCCCCCCCCCCccccCHHHHHHHHHH
Confidence 7888877641 34899999997 4433 677777 788775 999999999999998765434689999999999
Q ss_pred HHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc--hhHHHHHHhhcccc-----cc
Q 020630 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFG-----LA 189 (323)
Q Consensus 117 ~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~ 189 (323)
+++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++......... .......+...... ..
T Consensus 100 ~l~~l~~~------~~~lvGhS~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
T 1u2e_A 100 VVDQLDIA------KIHLLGNSMGGHSSVAFTLKWPER-VGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLK 172 (289)
T ss_dssp HHHHTTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHhCCC------ceEEEEECHhHHHHHHHHHHCHHh-hhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHH
Confidence 99988754 899999999999999999999998 999999998653221111 00001111110000 00
Q ss_pred cccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH-------HHHhcCCcccccEEEEeeCCCccc
Q 020630 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-------YIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
......... ................ .. .......+..... +....+.++++|+|+|+|++|.++
T Consensus 173 ~~~~~~~~~---~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 243 (289)
T 1u2e_A 173 LMMDIFVFD---TSDLTDALFEARLNNM----LS--RRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFV 243 (289)
T ss_dssp HHHHTTSSC---TTSCCHHHHHHHHHHH----HH--THHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSS
T ss_pred HHHHHhhcC---cccCCHHHHHHHHHHh----hc--ChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCcc
Confidence 000000000 0000000000000000 00 0000011110000 012456788999999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|++.++.+.+.+ +++++++++++||+.++++| +++.+.|.+||.
T Consensus 244 ~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~ 287 (289)
T 1u2e_A 244 PMDAGLRLLSGI--AGSELHIFRDCGHWAQWEHA----DAFNQLVLNFLA 287 (289)
T ss_dssp CTHHHHHHHHHS--TTCEEEEESSCCSCHHHHTH----HHHHHHHHHHHT
T ss_pred CHHHHHHHHhhC--CCcEEEEeCCCCCchhhcCH----HHHHHHHHHHhc
Confidence 999999999988 78999999999999996554 668888999985
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=228.18 Aligned_cols=286 Identities=12% Similarity=0.078 Sum_probs=182.3
Q ss_pred CCccccccccCCccceeEEecCCC-cEEEEEecCCCC-----CCceEEEEecCCCCCcchhhHH------HHHHHhcCCc
Q 020630 17 MPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFLPLDQ-----KVKATVYMTHGYGSDTGWMFQK------ICISYATWGY 84 (323)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~------~~~~l~~~g~ 84 (323)
++..+.....+++.+...+.+.|| .+.+..+.+... +++|+||++||++++.. .|.. ++..|+++||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~-~~~~~~~~~~~a~~l~~~G~ 92 (377)
T 1k8q_A 14 MNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGY 92 (377)
T ss_dssp CCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTC
T ss_pred cCHHHHHHHcCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh-hhhcCCCcccHHHHHHHCCC
Confidence 445566667788888999999999 999998866531 25899999999998865 5543 4458988999
Q ss_pred EEEEeccccCcCCCCC-----CCC---CCChHHHHh-hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC--
Q 020630 85 AVFAADLLGHGRSDGI-----RCY---LGDMEKVAA-SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP-- 153 (323)
Q Consensus 85 ~vi~~d~~G~G~s~~~-----~~~---~~~~~~~~~-d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-- 153 (323)
+|+++|+||||.|... ... .++++++++ |+.++++++....+ ..+++++||||||.+++.+|.++|+
T Consensus 93 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~~ 170 (377)
T 1k8q_A 93 DVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFSTNPKLA 170 (377)
T ss_dssp EEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHHCHHHH
T ss_pred CEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcC--cCceEEEEechhhHHHHHHHhcCchhh
Confidence 9999999999999752 111 458899998 99999887655433 4589999999999999999999997
Q ss_pred -CCeeEEEEccCccCCCCCCchhHHHH-----HHhhccc--ccccccc-------cCCCc----ccc-----------cc
Q 020630 154 -NTWTGLIFSAPLFVIPENMKPSKLHL-----FMYGLLF--GLADTWA-------AMPDN----KMV-----------GK 203 (323)
Q Consensus 154 -~~v~~~il~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~-------~~~~~----~~~-----------~~ 203 (323)
+ |+++|+++|............... .+...+. .+.+... ..... ... ..
T Consensus 171 ~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T 1k8q_A 171 KR-IKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTM 249 (377)
T ss_dssp TT-EEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGG
T ss_pred hh-hhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcc
Confidence 7 999999998765432211110000 0000000 0000000 00000 000 00
Q ss_pred cccChhhHHHhhcCCcccCCCCCchhHHHHHHh-----------------hHH------HHhcCCcccccEEEEeeCCCc
Q 020630 204 AIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----------------CQY------IQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~------~~~~~~~~~~P~l~i~g~~D~ 260 (323)
..............+. .........+... ... ....+.++++|+|+++|++|.
T Consensus 250 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 325 (377)
T 1k8q_A 250 NLNMSRLDVYLSHNPA----GTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDL 325 (377)
T ss_dssp GSCGGGHHHHHTTCCC----CEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCS
T ss_pred cCCHHHHHHHhccCCC----CccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCc
Confidence 0000011111110000 0000001000000 000 012367889999999999999
Q ss_pred ccCchhHHHHHHHhcCCCCc-EEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 261 VTCPTSSKLLYEKASSADKS-IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|++.++.+.+.+ ++.+ +++++++||+.++.. .+..+++.+.|.+||++
T Consensus 326 ~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 326 LADPHDVDLLLSKL--PNLIYHRKIPPYNHLDFIWA-MDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp SSCHHHHHHHHTTC--TTEEEEEEETTCCTTHHHHC-TTHHHHTHHHHHHHHHT
T ss_pred ccCHHHHHHHHHhC--cCcccEEecCCCCceEEEec-CCcHHHHHHHHHHHhcc
Confidence 99999999999988 5666 999999999998522 14467799999999874
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=229.86 Aligned_cols=263 Identities=12% Similarity=0.037 Sum_probs=162.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchh-------------hHHHH---HHHhcCCcEEEEeccccCcCCCC-----
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWM-------------FQKIC---ISYATWGYAVFAADLLGHGRSDG----- 99 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~-------------~~~~~---~~l~~~g~~vi~~d~~G~G~s~~----- 99 (323)
+|+|..+++.+...+|+|||+||++++.. . |..++ +.|..+||+|+++|+||||.|.+
T Consensus 28 ~i~y~~~g~~~~~~~p~vll~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~ 106 (377)
T 3i1i_A 28 QMGYETYGTLNRERSNVILICHYFSATSH-AAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVIT 106 (377)
T ss_dssp EEEEEEESCCCTTCCCEEEEECCTTCCSC-CSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCC
T ss_pred eEEEEeecccCCCCCCEEEEeccccCcch-hccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCccc
Confidence 66899998765455799999999998855 3 66666 66777899999999999987441
Q ss_pred --CCC-------------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEE-EEEechhHHHHHHHHhhcCCCCeeEEEE-c
Q 020630 100 --IRC-------------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAF-LFGESMGGAATMLMYFQSEPNTWTGLIF-S 162 (323)
Q Consensus 100 --~~~-------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~il-~ 162 (323)
+.. ..++++++++|+.++++.+..+ +++ |+||||||.+|+.+|.++|++ |+++|+ +
T Consensus 107 ~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~------~~~ilvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~ 179 (377)
T 3i1i_A 107 TGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIA------RLHAVMGPSAGGMIAQQWAVHYPHM-VERMIGVI 179 (377)
T ss_dssp CSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCC------CBSEEEEETHHHHHHHHHHHHCTTT-BSEEEEES
T ss_pred CCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCC------cEeeEEeeCHhHHHHHHHHHHChHH-HHHhcccC
Confidence 110 1358899999999999998754 776 999999999999999999999 999999 7
Q ss_pred cCccCCCCCCchhH-HHHHHhhccccccccccc--CC----------------Cccccccccc--------------Chh
Q 020630 163 APLFVIPENMKPSK-LHLFMYGLLFGLADTWAA--MP----------------DNKMVGKAIK--------------DPE 209 (323)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~----------------~~~~~~~~~~--------------~~~ 209 (323)
++............ ...........+...... .+ ....+...+. ...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T 3i1i_A 180 TNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTS 259 (377)
T ss_dssp CCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCH
T ss_pred cCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhH
Confidence 76543111000000 000000000000000000 00 0000000000 000
Q ss_pred hHHHhhcCCcccCCCCCchhHHHHHHhhHH---------HHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcC--CC
Q 020630 210 KLKVIASNPRRYTGKPRVGTMREIARVCQY---------IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS--AD 278 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~ 278 (323)
.............................. ....+.++++|+|+|+|++|.++|++.++.+.+.+.. ++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~ 339 (377)
T 3i1i_A 260 FEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKY 339 (377)
T ss_dssp HHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCC
Confidence 111110000000111111111111111110 1334567899999999999999999999999988732 67
Q ss_pred CcEEEecC-CCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 279 KSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 279 ~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++++++ +||+.++++| +++.+.|.+||++++
T Consensus 340 ~~~~~i~~~~gH~~~~e~p----~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 340 AEVYEIESINGHMAGVFDI----HLFEKKVYEFLNRKV 373 (377)
T ss_dssp EEECCBCCTTGGGHHHHCG----GGTHHHHHHHHHSCC
T ss_pred ceEEEcCCCCCCcchhcCH----HHHHHHHHHHHHhhh
Confidence 89999998 9999997766 458888999998654
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=212.03 Aligned_cols=226 Identities=17% Similarity=0.225 Sum_probs=164.4
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC-ChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG-DMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~-~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.+|+||++||++++.. .|..+++.|+++||+|+++|+||||.|+....... +++++++|+.++++++... ..++
T Consensus 21 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~ 95 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN-DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK----YAKV 95 (251)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT----CSEE
T ss_pred CCceEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh----cCCe
Confidence 4789999999999887 88999999999999999999999999965432222 7888899999999999876 4489
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHH
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK 212 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (323)
+++||||||.+++.+|.++|+. ++++++++|............ ......+.... .... .......
T Consensus 96 ~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~p~~~~~~~~~~~~--~~~~~~~~~~~---~~~~---------~~~~~~~ 160 (251)
T 3dkr_A 96 FVFGLSLGGIFAMKALETLPGI-TAGGVFSSPILPGKHHLVPGF--LKYAEYMNRLA---GKSD---------ESTQILA 160 (251)
T ss_dssp EEEESHHHHHHHHHHHHHCSSC-CEEEESSCCCCTTCBCHHHHH--HHHHHHHHHHH---TCCC---------CHHHHHH
T ss_pred EEEEechHHHHHHHHHHhCccc-eeeEEEecchhhccchhhHHH--HHHHHHHHhhc---ccCc---------chhhHHh
Confidence 9999999999999999999998 999999998876443222111 11111111100 0000 0000000
Q ss_pred HhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcC-CCCcEEEecCCCccc
Q 020630 213 VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS-ADKSIKIYDGMYHSL 291 (323)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 291 (323)
. .......+..........+.++++|+++++|++|.+++++.++.+.+.+.. .++++++++++||..
T Consensus 161 ~------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 228 (251)
T 3dkr_A 161 Y------------LPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVI 228 (251)
T ss_dssp H------------HHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCT
T ss_pred h------------hHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCccc
Confidence 0 001112222223334567788899999999999999999999999999865 456999999999999
Q ss_pred cccCCchhHHHHHHHHHHHHHHH
Q 020630 292 IQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+. ..+++.+.|.+||++.
T Consensus 229 ~~~~---~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 229 TVNS---AHHALEEDVIAFMQQE 248 (251)
T ss_dssp TTST---THHHHHHHHHHHHHTT
T ss_pred cccc---chhHHHHHHHHHHHhh
Confidence 8542 2577999999999864
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=219.99 Aligned_cols=263 Identities=11% Similarity=0.069 Sum_probs=170.3
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC---CCChH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY---LGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~---~~~~~ 108 (323)
..+...+| +++|..+++ +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|..+... .++++
T Consensus 11 ~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEGT-----GDPILFQHGNPTSSY-LWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERYAYA 83 (302)
T ss_dssp CEEEEETTEEEEEEEESC-----SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHH
T ss_pred ceEEEECCEEEEEEEcCC-----CCEEEEECCCCCchh-hhHHHHHHhccC-CeEEEEcCCCCCCCCCCCCCCcccccHH
Confidence 44566788 999998874 579999999998876 788888889876 89999999999999865321 25899
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC--ch--hHHHHHHhhc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KP--SKLHLFMYGL 184 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~--~~--~~~~~~~~~~ 184 (323)
++++|+.++++.+.. ..+++++||||||.+++.+|.++|++ |+++|++++........ .. ......+...
T Consensus 84 ~~~~~~~~~l~~l~~-----~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T 1mj5_A 84 EHRDYLDALWEALDL-----GDRVVLVVHDWGSALGFDWARRHRER-VQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQ 157 (302)
T ss_dssp HHHHHHHHHHHHTTC-----TTCEEEEEEHHHHHHHHHHHHHTGGG-EEEEEEEEECCSCBCGGGSCGGGHHHHHHHHST
T ss_pred HHHHHHHHHHHHhCC-----CceEEEEEECCccHHHHHHHHHCHHH-HhheeeecccCCchhhhhhhHHHHHHHHHHhcc
Confidence 999999999999864 13899999999999999999999998 99999999876422110 00 0011111000
Q ss_pred cc-ccccccccCCCccccc----ccccChhhHHHhhcCCcc----------cCCCCCchhHHHHHHhhHHHHhcCCcccc
Q 020630 185 LF-GLADTWAAMPDNKMVG----KAIKDPEKLKVIASNPRR----------YTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 185 ~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
.. ........ ....... .................. ............+.....+....+.++++
T Consensus 158 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 236 (302)
T 1mj5_A 158 AGEELVLQDNV-FVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236 (302)
T ss_dssp THHHHHTTTCH-HHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCS
T ss_pred chhhhhcChHH-HHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCC
Confidence 00 00000000 0000000 000000011110000000 00000000000111122234566788999
Q ss_pred cEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 250 PFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|+++|+|++|.++|++.++.+.+.+ ++ +++++ ++||++++++| +++.+.|.+|+.+...+
T Consensus 237 P~l~i~g~~D~~~~~~~~~~~~~~~--~~-~~~~~-~~gH~~~~e~p----~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 237 PKLFINAEPGALTTGRMRDFCRTWP--NQ-TEITV-AGAHFIQEDSP----DEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp CEEEEEEEECSSSSHHHHHHHTTCS--SE-EEEEE-EESSCGGGTCH----HHHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCCCCChHHHHHHHHhc--CC-ceEEe-cCcCcccccCH----HHHHHHHHHHHHhhccc
Confidence 9999999999999999888888877 66 89999 99999996554 67999999999876543
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-32 Score=212.35 Aligned_cols=235 Identities=14% Similarity=0.133 Sum_probs=172.2
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
+...+.. +| ++.++.+.|. ++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|...... .++..
T Consensus 7 ~~~~~~~-~g~~l~~~~~~p~---~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~-~~~~~ 80 (290)
T 3ksr_A 7 SSIEIPV-GQDELSGTLLTPT---GMPGVLFVHGWGGSQH-HSLVRAREAVGLGCICMTFDLRGHEGYASMRQS-VTRAQ 80 (290)
T ss_dssp EEEEEEE-TTEEEEEEEEEEE---SEEEEEEECCTTCCTT-TTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTT-CBHHH
T ss_pred eeEEecC-CCeEEEEEEecCC---CCcEEEEeCCCCCCcC-cHHHHHHHHHHCCCEEEEeecCCCCCCCCCccc-ccHHH
Confidence 4445555 67 9999999986 4899999999998877 889999999999999999999999999765433 48899
Q ss_pred HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc
Q 020630 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+++|+.++++++.....++..+++++||||||.+++.++.++| ++++++++|.................
T Consensus 81 ~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~---~~~~~l~~p~~~~~~~~~~~~~~~~~-------- 149 (290)
T 3ksr_A 81 NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP---VEWLALRSPALYKDAHWDQPKVSLNA-------- 149 (290)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC---CSEEEEESCCCCCSSCTTSBHHHHHH--------
T ss_pred HHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC---CCEEEEeCcchhhhhhhhcccccccC--------
Confidence 9999999999998764334568999999999999999999987 77889988876533211110000000
Q ss_pred cccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
...... +........ .......+.++++|+|+++|++|.+++.+..+.
T Consensus 150 -----------------~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~ 197 (290)
T 3ksr_A 150 -----------------DPDLMD-YRRRALAPG--------------DNLALAACAQYKGDVLLVEAENDVIVPHPVMRN 197 (290)
T ss_dssp -----------------STTHHH-HTTSCCCGG--------------GCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHH
T ss_pred -----------------Chhhhh-hhhhhhhhc--------------cccHHHHHHhcCCCeEEEEecCCcccChHHHHH
Confidence 000000 000000000 000123345678999999999999999999999
Q ss_pred HHHHhcCC-CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 270 LYEKASSA-DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 270 ~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.+.++.. ++++.+++++||.+.. .+..+.+.+.+.+||++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 198 YADAFTNARSLTSRVIAGADHALSV---KEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp HHHHTTTSSEEEEEEETTCCTTCCS---HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCCCceEEEcCCCCCCCCc---chHHHHHHHHHHHHHHHHhcC
Confidence 99998432 3569999999998763 445678999999999988754
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=217.23 Aligned_cols=252 Identities=15% Similarity=0.139 Sum_probs=166.1
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
....+| +++|..+++ +|+||++||++++.. .|..+++.|++ ||+|+++|+||+|.|.... ..++++++++|
T Consensus 52 ~~~~~~~~~~~~~~g~-----~p~vv~lhG~~~~~~-~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~-~~~~~~~~~~d 123 (314)
T 3kxp_A 52 RVDIGRITLNVREKGS-----GPLMLFFHGITSNSA-VFEPLMIRLSD-RFTTIAVDQRGHGLSDKPE-TGYEANDYADD 123 (314)
T ss_dssp EEECSSCEEEEEEECC-----SSEEEEECCTTCCGG-GGHHHHHTTTT-TSEEEEECCTTSTTSCCCS-SCCSHHHHHHH
T ss_pred eEEECCEEEEEEecCC-----CCEEEEECCCCCCHH-HHHHHHHHHHc-CCeEEEEeCCCcCCCCCCC-CCCCHHHHHHH
Confidence 344566 999988865 679999999998877 88999999987 6999999999999998443 33589999999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+.++++++..+ +++++|||+||.+++.+|.++|++ |+++|++++....... .................
T Consensus 124 l~~~l~~l~~~------~v~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 191 (314)
T 3kxp_A 124 IAGLIRTLARG------HAILVGHSLGARNSVTAAAKYPDL-VRSVVAIDFTPYIETE-----ALDALEARVNAGSQLFE 191 (314)
T ss_dssp HHHHHHHHTSS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCTTCCHH-----HHHHHHHHTTTTCSCBS
T ss_pred HHHHHHHhCCC------CcEEEEECchHHHHHHHHHhChhh-eeEEEEeCCCCCCCcc-----hhhHHHHHhhhchhhhc
Confidence 99999999753 899999999999999999999998 9999999986543211 11111111100000000
Q ss_pred cCC-Ccccccc---cccChhhHHHhhcCCcccC----CCCCchhHHHHHHhhH-HHHhcCCcccccEEEEeeCCCcccCc
Q 020630 194 AMP-DNKMVGK---AIKDPEKLKVIASNPRRYT----GKPRVGTMREIARVCQ-YIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 194 ~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
... ....... ................... ................ +....+.++++|+|+++|++|.++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~ 271 (314)
T 3kxp_A 192 DIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSA 271 (314)
T ss_dssp SHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCH
T ss_pred CHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCH
Confidence 000 0000000 0000011111111100000 0000000011100000 12334567899999999999999999
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.++.+.+.+ +++++++++++||+++.++ .+.+.+.|.+||+
T Consensus 272 ~~~~~~~~~~--~~~~~~~~~g~gH~~~~e~----~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 272 AALAKTSRLR--PDLPVVVVPGADHYVNEVS----PEITLKAITNFID 313 (314)
T ss_dssp HHHHHHHHHC--TTSCEEEETTCCSCHHHHC----HHHHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCceEEEcCCCCCcchhhC----HHHHHHHHHHHHh
Confidence 9999999988 7899999999999998544 4679999999986
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=213.83 Aligned_cols=263 Identities=13% Similarity=0.050 Sum_probs=160.1
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~ 108 (323)
+..++...+| +++|..+++++ +++|||+||++++..+ ..+...+...||+|+++|+||||.|+.... ..++++
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~---g~~vvllHG~~~~~~~--~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 89 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPN---GKPAVFIHGGPGGGIS--PHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTW 89 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTT---SEEEEEECCTTTCCCC--GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHH
T ss_pred eeeEEEcCCCcEEEEEEcCCCC---CCcEEEECCCCCcccc--hhhhhhccccCCeEEEECCCCCCCCCCCcccccccHH
Confidence 4456777788 99999988643 5789999998765431 112233445689999999999999975432 245889
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH---------H
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---------L 179 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~---------~ 179 (323)
++++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+.. .
T Consensus 90 ~~~~dl~~l~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~ 160 (317)
T 1wm1_A 90 HLVADIERLREMAGVE------QWLVFGGSWGSTLALAYAQTHPER-VSEMVLRGIFTLRKQR--LHWYYQDGASRFFPE 160 (317)
T ss_dssp HHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHH--HHHHHTSSGGGTSHH
T ss_pred HHHHHHHHHHHHcCCC------cEEEEEeCHHHHHHHHHHHHCChh-eeeeeEeccCCCchhh--hhHHhhccchhhcHH
Confidence 9999999999998754 899999999999999999999999 9999999875421100 00000 0
Q ss_pred HHhhcccccccccccCCCcccccccc-cChhh-----HHH--hhcCCcccCCCCC------chhHHHHH-------Hh--
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAI-KDPEK-----LKV--IASNPRRYTGKPR------VGTMREIA-------RV-- 236 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~--~~~~~~~~~~~~~------~~~~~~~~-------~~-- 236 (323)
....+...............+..... .+... ..+ ............. ......+. ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (317)
T 1wm1_A 161 KWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLG 240 (317)
T ss_dssp HHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhccc
Confidence 00000000000000000000000000 00000 000 0000000000000 00000000 00
Q ss_pred ---hHH-HHhcCCccc-ccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 237 ---CQY-IQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 237 ---~~~-~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
... ....+.++. +|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++. ++..+++.+.|.+|+
T Consensus 241 ~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~--p~~~~~~i~~~gH~~~~---~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 241 FLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW--PEAELHIVEGAGHSYDE---PGILHQLMIATDRFA 315 (317)
T ss_dssp GCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTTS---HHHHHHHHHHHHHHT
T ss_pred ccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC--CCceEEEECCCCCCCCC---cchHHHHHHHHHHHh
Confidence 001 234566775 99999999999999999999999988 78999999999998852 245778888888887
Q ss_pred H
Q 020630 312 D 312 (323)
Q Consensus 312 ~ 312 (323)
.
T Consensus 316 ~ 316 (317)
T 1wm1_A 316 G 316 (317)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-30 Score=201.20 Aligned_cols=213 Identities=16% Similarity=0.196 Sum_probs=166.2
Q ss_pred cccCCccc--eeEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCc----chhhHHHHHHHhcCCcEEEEeccccCcCC
Q 020630 24 TSQGVRNG--KEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDT----GWMFQKICISYATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 24 ~~~~~~~~--~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~----~~~~~~~~~~l~~~g~~vi~~d~~G~G~s 97 (323)
...+.+++ +..+.+.+|+|.++.+.|.+ +++|+||++||+++.. ...|..+++.|+++||.|+++|+||+|.|
T Consensus 15 ~~~~~~~e~~~~~~~~~~g~l~~~~~~p~~-~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 93 (249)
T 2i3d_A 15 ENLYFQGHMPEVIFNGPAGRLEGRYQPSKE-KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRS 93 (249)
T ss_dssp ---------CEEEEEETTEEEEEEEECCSS-TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTC
T ss_pred ccccccCceeEEEEECCCceEEEEEEcCCC-CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCC
Confidence 34445556 88888888888888887754 5689999999985322 23567899999999999999999999999
Q ss_pred CCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHH
Q 020630 98 DGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 98 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~ 177 (323)
...... ..... +|+.++++++..... +..+++++|||+||.+++.++.++|+ ++++|+++|......
T Consensus 94 ~~~~~~--~~~~~-~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~------- 160 (249)
T 2i3d_A 94 QGEFDH--GAGEL-SDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE--IEGFMSIAPQPNTYD------- 160 (249)
T ss_dssp CSCCCS--SHHHH-HHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT--EEEEEEESCCTTTSC-------
T ss_pred CCCCCC--ccchH-HHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC--ccEEEEEcCchhhhh-------
Confidence 765432 45555 999999999987743 34589999999999999999999987 999999998754110
Q ss_pred HHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
...+.++++|+++++|+
T Consensus 161 ---------------------------------------------------------------~~~~~~~~~P~lii~G~ 177 (249)
T 2i3d_A 161 ---------------------------------------------------------------FSFLAPCPSSGLIINGD 177 (249)
T ss_dssp ---------------------------------------------------------------CTTCTTCCSCEEEEEET
T ss_pred ---------------------------------------------------------------hhhhcccCCCEEEEEcC
Confidence 12245678999999999
Q ss_pred CCcccCchhHHHHHHHhcCC---CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 258 ADGVTCPTSSKLLYEKASSA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+|.+++.+.++.+.+.+..+ ++++++++++||.+. + ..+.+.+.+.+||++++...
T Consensus 178 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~----~~~~~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 178 ADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-G----KVDELMGECEDYLDRRLNGE 236 (249)
T ss_dssp TCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-T----CHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-c----CHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999988421 689999999999987 3 34778999999999988543
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=222.12 Aligned_cols=249 Identities=13% Similarity=0.152 Sum_probs=160.5
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCC---CCCCCCChHHHHhhHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG---IRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~ 117 (323)
+++|...++. +|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|.. ......+++++++|+.++
T Consensus 10 ~l~~~~~g~~----~p~vv~~HG~~~~~~-~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dnp_A 10 ALNVRVVGSG----ERVLVLAHGFGTDQS-AWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHI 83 (269)
T ss_dssp HTTCEEECSC----SSEEEEECCTTCCGG-GGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHH
T ss_pred HhhhhhcCCC----CCEEEEEeCCCCcHH-HHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHH
Confidence 4566666652 689999999998876 88889999988 89999999999999975 223334899999999999
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc-----hhHHHHHHhhccccccccc
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-----PSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 192 (323)
++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++......... ...........+......+
T Consensus 84 ~~~~~~~------~~~l~GhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (269)
T 4dnp_A 84 LDALGID------CCAYVGHSVSAMIGILASIRRPEL-FSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAW 156 (269)
T ss_dssp HHHTTCC------SEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHH
T ss_pred HHhcCCC------eEEEEccCHHHHHHHHHHHhCcHh-hceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHH
Confidence 9998643 899999999999999999999998 999999998654322110 0000111110000000000
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEeeCCCcccCchhHHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
.......... .........+...... ............. .+....+.++++|+++++|++|.++|++.++.+
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 230 (269)
T 4dnp_A 157 VNGFAPLAVG--ADVPAAVREFSRTLFN----MRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYL 230 (269)
T ss_dssp HHHHHHHHHC--SSCHHHHHHHHHHHHH----SCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHH
T ss_pred HHHhhhhhcc--CCChhHHHHHHHHHHc----cCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHH
Confidence 0000000000 0000000000000000 0000011111110 012345678899999999999999999999999
Q ss_pred HHHhcCCC-CcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 271 YEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 271 ~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+ ++ +++++++++||+.++++| +++.+.|.+||+++
T Consensus 231 ~~~~--~~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 231 KNHL--GGKNTVHWLNIEGHLPHLSAP----TLLAQELRRALSHR 269 (269)
T ss_dssp HHHS--SSCEEEEEEEEESSCHHHHCH----HHHHHHHHHHHC--
T ss_pred HHhC--CCCceEEEeCCCCCCccccCH----HHHHHHHHHHHhhC
Confidence 9998 55 799999999999995544 67899999998753
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=217.77 Aligned_cols=242 Identities=15% Similarity=0.192 Sum_probs=150.2
Q ss_pred cEEEEEecCCCCCCce-EEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKA-TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~-~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~ 119 (323)
+++|..+++ +| +|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.. ..++++++++++.+.++
T Consensus 3 ~l~~~~~G~-----g~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~~l~ 73 (258)
T 1m33_A 3 NIWWQTKGQ-----GNVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGF--GALSLADMAEAVLQQAP 73 (258)
T ss_dssp CCCEEEECC-----CSSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTCCSC--CCCCHHHHHHHHHTTSC
T ss_pred ceEEEEecC-----CCCeEEEECCCCCChH-HHHHHHHHhhc-CcEEEEeeCCCCCCCCCC--CCcCHHHHHHHHHHHhC
Confidence 466777764 35 8999999998877 88889999975 699999999999999876 23578887776654432
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCC----chhHHHHHHhhccc----ccccc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM----KPSKLHLFMYGLLF----GLADT 191 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~ 191 (323)
.+++|+||||||.+|+.+|.++|++ |+++|++++........ ........+...+. .....
T Consensus 74 ----------~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (258)
T 1m33_A 74 ----------DKAIWLGWSLGGLVASQIALTHPER-VRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVER 142 (258)
T ss_dssp ----------SSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCeEEEEECHHHHHHHHHHHHhhHh-hceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHH
Confidence 3899999999999999999999999 99999998754322110 00000000000000 00000
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
+.... ..... ........+...... ................. +....+.++++|+++|+|++|.++|.+.++.
T Consensus 143 ~~~~~---~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~ 217 (258)
T 1m33_A 143 FLALQ---TMGTE-TARQDARALKKTVLA-LPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM 217 (258)
T ss_dssp HHHTT---STTST-THHHHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-
T ss_pred HHHHH---hcCCc-cchhhHHHHHHHHHh-ccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHH
Confidence 00000 00000 000000000000000 00011111111111111 1234567889999999999999999988888
Q ss_pred HHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+.+ +++++++++++||++++++| +++.+.|.+|+.+
T Consensus 218 ~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 255 (258)
T 1m33_A 218 LDKLW--PHSESYIFAKAAHAPFISHP----AEFCHLLVALKQR 255 (258)
T ss_dssp CTTTC--TTCEEEEETTCCSCHHHHSH----HHHHHHHHHHHTT
T ss_pred HHHhC--ccceEEEeCCCCCCccccCH----HHHHHHHHHHHHh
Confidence 77777 78899999999999996554 6789999999864
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-32 Score=218.51 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=106.7
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChHHHH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVA 111 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~ 111 (323)
.+...+| +++|..+++.+ ..+|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|..... ..+++++++
T Consensus 6 ~~~~~~g~~l~y~~~G~~~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~ 83 (356)
T 2e3j_A 6 RILNCRGTRIHAVADSPPD-QQGPLVVLLHGFPESWY-SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELV 83 (356)
T ss_dssp EEEEETTEEEEEEEECCTT-CCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHH
T ss_pred EEEccCCeEEEEEEecCCC-CCCCEEEEECCCCCcHH-HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHH
Confidence 3445678 99999999753 34789999999998876 78889999988899999999999999986543 234889999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
+|+.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++..
T Consensus 84 ~~~~~~~~~l~~~------~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~ 131 (356)
T 2e3j_A 84 GDVVGVLDSYGAE------QAFVVGHDWGAPVAWTFAWLHPDR-CAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHHTTCS------CEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESSCC
T ss_pred HHHHHHHHHcCCC------CeEEEEECHhHHHHHHHHHhCcHh-hcEEEEECCcc
Confidence 9999999998643 899999999999999999999998 99999998765
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-32 Score=219.07 Aligned_cols=262 Identities=13% Similarity=0.167 Sum_probs=166.3
Q ss_pred CCC-cEEEEEecCCCCCCceEEEEecCCCCCcch------------hhHHHHH---HHhcCCcEEEEecccc--CcCCCC
Q 020630 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW------------MFQKICI---SYATWGYAVFAADLLG--HGRSDG 99 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------~~~~~~~---~l~~~g~~vi~~d~~G--~G~s~~ 99 (323)
.+| +++|..+++.+...+|+|||+||++++... .|..++. .|.++||+|+++|+|| +|.|..
T Consensus 28 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~ 107 (366)
T 2pl5_A 28 LSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGP 107 (366)
T ss_dssp ESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSST
T ss_pred ccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCC
Confidence 467 899999997643347899999999987641 4666653 4556789999999999 898864
Q ss_pred CCC--C----------CCChHHHHhhHHHHHHHHHhhCCCCCCCE-EEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 100 IRC--Y----------LGDMEKVAASSLSFFKHVRHSEPYRDLPA-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 100 ~~~--~----------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
... . .++++++++|+.++++.+..+ ++ +|+||||||.+|+.+|.++|++ |+++|++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~------~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 180 (366)
T 2pl5_A 108 LSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE------KLFCVAGGSMGGMQALEWSIAYPNS-LSNCIVMASTA 180 (366)
T ss_dssp TSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS------SEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCS
T ss_pred CCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCc------eEEEEEEeCccHHHHHHHHHhCcHh-hhheeEeccCc
Confidence 321 0 258999999999999998643 88 8999999999999999999998 99999999876
Q ss_pred CCCCCCchhHHHHHHhhcccccccccccC------CCcc-----ccc--ccccChhhHHHhhc-----------------
Q 020630 167 VIPENMKPSKLHLFMYGLLFGLADTWAAM------PDNK-----MVG--KAIKDPEKLKVIAS----------------- 216 (323)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-----~~~--~~~~~~~~~~~~~~----------------- 216 (323)
...... . .........+... +.+... .... ... ...........+..
T Consensus 181 ~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
T 2pl5_A 181 EHSAMQ-I-AFNEVGRQAILSD-PNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSY 257 (366)
T ss_dssp BCCHHH-H-HHHHHHHHHHHTS-TTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGG
T ss_pred cCCCcc-c-hhhHHHHHHHHhC-cccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHH
Confidence 543110 0 0000000000000 000000 0000 000 00000000000000
Q ss_pred ---CCcccCCCCCchhHHHHHHhhH--------HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCC--CCcEEE
Q 020630 217 ---NPRRYTGKPRVGTMREIARVCQ--------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA--DKSIKI 283 (323)
Q Consensus 217 ---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~ 283 (323)
...................... +....+.++++|+|+|+|++|.++|++.++.+.+.++.. ++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (366)
T 2pl5_A 258 LIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVE 337 (366)
T ss_dssp GGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEE
Confidence 0000011111111222122111 133467888999999999999999999999999998311 789999
Q ss_pred e-cCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 284 Y-DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 284 ~-~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+ +++||++++++| +++.+.|.+||++
T Consensus 338 ~~~~~gH~~~~e~p----~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 338 LQSGEGHDSFLLKN----PKQIEILKGFLEN 364 (366)
T ss_dssp ECCCBSSGGGGSCC----HHHHHHHHHHHHC
T ss_pred eCCCCCcchhhcCh----hHHHHHHHHHHcc
Confidence 9 899999997776 5688899999864
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-31 Score=198.12 Aligned_cols=197 Identities=22% Similarity=0.362 Sum_probs=161.5
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH--HHHHHhcCCcEEEEeccccCcCC---CCCCCC
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK--ICISYATWGYAVFAADLLGHGRS---DGIRCY 103 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~vi~~d~~G~G~s---~~~~~~ 103 (323)
.+..++. .+| ++++..|.+.+ ++|+||++||++++.. .|.. +++.|+++||.|+++|+||+|.| ......
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 79 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS--NRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGID 79 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT--CCEEEEEECCTTCCGG-GGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCT
T ss_pred ceeEEEe-eCCcEEEEEEEeccC--CCCeEEEECCCCCCcc-ccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCC
Confidence 3444444 577 99988888764 5789999999998877 7888 99999999999999999999999 554433
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+.+++++++..+++.+.. .+++++|||+||.+++.++.++|++ ++++++++|.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~------~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~-------------- 138 (207)
T 3bdi_A 80 RGDLKHAAEFIRDYLKANGV------ARSVIMGASMGGGMVIMTTLQYPDI-VDGIIAVAPAWVES-------------- 138 (207)
T ss_dssp TCCHHHHHHHHHHHHHHTTC------SSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCGG--------------
T ss_pred cchHHHHHHHHHHHHHHcCC------CceEEEEECccHHHHHHHHHhCchh-heEEEEeCCccccc--------------
Confidence 22789999999999988753 3899999999999999999999988 99999999863210
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccC
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
+ ...+.++++|+++++|++|.+++
T Consensus 139 --------~------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~ 162 (207)
T 3bdi_A 139 --------L------------------------------------------------KGDMKKIRQKTLLVWGSKDHVVP 162 (207)
T ss_dssp --------G------------------------------------------------HHHHTTCCSCEEEEEETTCTTTT
T ss_pred --------h------------------------------------------------hHHHhhccCCEEEEEECCCCccc
Confidence 0 12235668999999999999999
Q ss_pred chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+..+.+.+.+ +++++.+++++||..+.+ ..+++.+.|.+||++
T Consensus 163 ~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~----~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 163 IALSKEYASII--SGSRLEIVEGSGHPVYIE----KPEEFVRITVDFLRN 206 (207)
T ss_dssp HHHHHHHHHHS--TTCEEEEETTCCSCHHHH----SHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHhc--CCceEEEeCCCCCCcccc----CHHHHHHHHHHHHhh
Confidence 99999999988 778999999999999843 356788999999864
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=195.70 Aligned_cols=200 Identities=17% Similarity=0.143 Sum_probs=159.9
Q ss_pred CccceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC---CC-cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC
Q 020630 28 VRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~---~~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~ 103 (323)
+..++..+.+.+|++.++.+.|.+.+++|+||++||++ +. ....|..+++.|+++||+|+++|+||+|.|.....
T Consensus 4 ~~~~~~~~~~~~g~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~- 82 (208)
T 3trd_A 4 MTNEDFLIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYD- 82 (208)
T ss_dssp CSSSCEEEECSSSEEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-
T ss_pred cccceEEEECCCceEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCcc-
Confidence 34577888888889999999887645789999999942 22 23367889999999999999999999999976532
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
......+|+.++++++....+ ..+++++|||+||.+++.++ .+| + ++++|++++.....
T Consensus 83 --~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a-~~~-~-v~~~v~~~~~~~~~-------------- 141 (208)
T 3trd_A 83 --NGVGEVEDLKAVLRWVEHHWS--QDDIWLAGFSFGAYISAKVA-YDQ-K-VAQLISVAPPVFYE-------------- 141 (208)
T ss_dssp --TTTHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHH-HHS-C-CSEEEEESCCTTSG--------------
T ss_pred --chHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCHHHHHHHHHh-ccC-C-ccEEEEeccccccC--------------
Confidence 345667889999999887643 56899999999999999999 667 4 99999999875100
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccC
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
....+..+++|+++++|++|.++|
T Consensus 142 --------------------------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~ 165 (208)
T 3trd_A 142 --------------------------------------------------------GFASLTQMASPWLIVQGDQDEVVP 165 (208)
T ss_dssp --------------------------------------------------------GGTTCCSCCSCEEEEEETTCSSSC
T ss_pred --------------------------------------------------------CchhhhhcCCCEEEEECCCCCCCC
Confidence 012234558999999999999999
Q ss_pred chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.++.+.+.+.. ++++++++++||.+.. +. +++.+.+.+||
T Consensus 166 ~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~----~~-~~~~~~i~~fl 207 (208)
T 3trd_A 166 FEQVKAFVNQISS-PVEFVVMSGASHFFHG----RL-IELRELLVRNL 207 (208)
T ss_dssp HHHHHHHHHHSSS-CCEEEEETTCCSSCTT----CH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHccC-ceEEEEeCCCCCcccc----cH-HHHHHHHHHHh
Confidence 9999999988842 3899999999999883 32 66888888887
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=215.44 Aligned_cols=261 Identities=15% Similarity=0.060 Sum_probs=156.9
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~ 108 (323)
+..++...+| +++|..+++++ +++|||+||++++.. . ..+...+...||+|+++|+||||.|+.... ..++++
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~---g~pvvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 86 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPH---GKPVVMLHGGPGGGC-N-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTW 86 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTT---SEEEEEECSTTTTCC-C-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHH
T ss_pred ccceEEcCCCCEEEEEecCCCC---CCeEEEECCCCCccc-c-HHHHHhcCcCcceEEEECCCCCcCCCCCcccccccHH
Confidence 4556777788 99999988643 578999999876543 1 112334445689999999999999976432 245899
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH---------H
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---------L 179 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~---------~ 179 (323)
++++|+.++++.++.+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+.. .
T Consensus 87 ~~~~dl~~l~~~l~~~------~~~lvGhSmGg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~ 157 (313)
T 1azw_A 87 DLVADIERLRTHLGVD------RWQVFGGSWGSTLALAYAQTHPQQ-VTELVLRGIFLLRRFE--LEWFYQEGASRLFPD 157 (313)
T ss_dssp HHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHH--HHHHHTSSHHHHCHH
T ss_pred HHHHHHHHHHHHhCCC------ceEEEEECHHHHHHHHHHHhChhh-eeEEEEeccccCchhh--hHHHHhhhhhhhchH
Confidence 9999999999998754 899999999999999999999999 9999999875421100 00000 0
Q ss_pred HHhhcccccccccccCCCcccccccc-cChhhHH-----H--hhcCCcccCCCC---------Cch-hHHHH----HHh-
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAI-KDPEKLK-----V--IASNPRRYTGKP---------RVG-TMREI----ARV- 236 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~--~~~~~~~~~~~~---------~~~-~~~~~----~~~- 236 (323)
....+...............+..... .+..... + ............ ... ..... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
T 1azw_A 158 AWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNG 237 (313)
T ss_dssp HHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHhhccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhccc
Confidence 00000000000000000000000000 0000000 0 000000000000 000 00000 000
Q ss_pred -----hHHHHhcCCccc-ccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 237 -----CQYIQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 237 -----~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.......+.+++ +|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++ + ++..+.+.+.+.+|
T Consensus 238 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~--~-~~~~~~~~~~i~~f 312 (313)
T 1azw_A 238 GFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW--PKAQLQISPASGHSAF--E-PENVDALVRATDGF 312 (313)
T ss_dssp GGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTT--S-HHHHHHHHHHHHHH
T ss_pred ccccccchhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhC--CCcEEEEeCCCCCCcC--C-CccHHHHHHHHhhc
Confidence 011234566775 99999999999999999999999988 7899999999999875 1 34456666666665
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=214.13 Aligned_cols=253 Identities=8% Similarity=0.019 Sum_probs=158.1
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH-----HHHHHhcCCcEEEEeccccCcCCCCCCCCC---CC
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-----ICISYATWGYAVFAADLLGHGRSDGIRCYL---GD 106 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-----~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~---~~ 106 (323)
+..+| +++|..+++.. ..+|+|||+||++++....|.. +++.|++ +|+|+++|+||||.|....... ++
T Consensus 16 ~~~~~~~l~y~~~G~~~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~ 93 (286)
T 2qmq_A 16 VETPYGSVTFTVYGTPK-PKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLGYQYPS 93 (286)
T ss_dssp EEETTEEEEEEEESCCC-TTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTTCCCCC
T ss_pred cccCCeEEEEEeccCCC-CCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCCCCccC
Confidence 34467 99999998753 3478999999999886523554 7788877 5999999999999886542222 38
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++++|+.++++.+... +++|+||||||.+++.+|.++|++ |+++|++++....... ..+..........
T Consensus 94 ~~~~~~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~ 164 (286)
T 2qmq_A 94 LDQLADMIPCILQYLNFS------TIIGVGVGAGAYILSRYALNHPDT-VEGLVLINIDPNAKGW--MDWAAHKLTGLTS 164 (286)
T ss_dssp HHHHHHTHHHHHHHHTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCCCH--HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhCCC------cEEEEEEChHHHHHHHHHHhChhh-eeeEEEECCCCcccch--hhhhhhhhccccc
Confidence 999999999999998643 899999999999999999999998 9999999986543211 1111111000000
Q ss_pred ccccccccCCCcccccc-c-ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH---HH---HhcCCcccccEEEEeeCC
Q 020630 187 GLADTWAAMPDNKMVGK-A-IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ---YI---QDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~P~l~i~g~~ 258 (323)
....... ...... . .........+..... ..........+..... .. ...+.++++|+|+|+|++
T Consensus 165 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 237 (286)
T 2qmq_A 165 SIPDMIL----GHLFSQEELSGNSELIQKYRGIIQ---HAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQ 237 (286)
T ss_dssp CHHHHHH----HHHSCHHHHHTTCHHHHHHHHHHH---TCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETT
T ss_pred cchHHHH----HHHhcCCCCCcchHHHHHHHHHHH---hcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCC
Confidence 0000000 000000 0 000000000000000 0000001111111110 00 134567899999999999
Q ss_pred CcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++| ...+.+.+.. .+++++++++++||++++++ ++++.+.|.+||+
T Consensus 238 D~~~~-~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~----p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 238 APHED-AVVECNSKLD-PTQTSFLKMADSGGQPQLTQ----PGKLTEAFKYFLQ 285 (286)
T ss_dssp STTHH-HHHHHHHHSC-GGGEEEEEETTCTTCHHHHC----HHHHHHHHHHHHC
T ss_pred Ccccc-HHHHHHHHhc-CCCceEEEeCCCCCcccccC----hHHHHHHHHHHhc
Confidence 99998 4444444444 12789999999999999554 4678899999984
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=203.84 Aligned_cols=196 Identities=19% Similarity=0.276 Sum_probs=158.6
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH--HHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK--ICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
+..++.. +| +++|..+.|.+++++|+||++||++++.. .|.. +++.|+++||.|+++|+||+|.|..... ..++
T Consensus 8 ~~~~~~~-~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-~~~~ 84 (210)
T 1imj_A 8 REGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAA-PAPI 84 (210)
T ss_dssp CCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCC-SSCT
T ss_pred ccceEee-CCeEEEEEEeCCCCCCCCceEEEECCCCCccc-eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCC-cchh
Confidence 3444444 78 99999998876567899999999998876 7777 5899999999999999999999986652 2356
Q ss_pred HHHH--hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 108 EKVA--ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 108 ~~~~--~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
++.+ +++..+++.+..+ +++++|||+||.+++.++..+|++ ++++|+++|......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~--------------- 142 (210)
T 1imj_A 85 GELAPGSFLAAVVDALELG------PPVVISPSLSGMYSLPFLTAPGSQ-LPGFVPVAPICTDKI--------------- 142 (210)
T ss_dssp TSCCCTHHHHHHHHHHTCC------SCEEEEEGGGHHHHHHHHTSTTCC-CSEEEEESCSCGGGS---------------
T ss_pred hhcchHHHHHHHHHHhCCC------CeEEEEECchHHHHHHHHHhCccc-cceEEEeCCCccccc---------------
Confidence 6666 8888888888643 899999999999999999999998 999999998643100
Q ss_pred cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
....+.++++|+++++|++|. ++.+
T Consensus 143 ------------------------------------------------------~~~~~~~~~~p~l~i~g~~D~-~~~~ 167 (210)
T 1imj_A 143 ------------------------------------------------------NAANYASVKTPALIVYGDQDP-MGQT 167 (210)
T ss_dssp ------------------------------------------------------CHHHHHTCCSCEEEEEETTCH-HHHH
T ss_pred ------------------------------------------------------cchhhhhCCCCEEEEEcCccc-CCHH
Confidence 012234568999999999999 9998
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
..+.+ +.+ +++++.+++++||..+.++ .+.+.+.|.+||++
T Consensus 168 ~~~~~-~~~--~~~~~~~~~~~~H~~~~~~----~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 168 SFEHL-KQL--PNHRVLIMKGAGHPCYLDK----PEEWHTGLLDFLQG 208 (210)
T ss_dssp HHHHH-TTS--SSEEEEEETTCCTTHHHHC----HHHHHHHHHHHHHT
T ss_pred HHHHH-hhC--CCCCEEEecCCCcchhhcC----HHHHHHHHHHHHHh
Confidence 88888 766 6789999999999998544 46788899999875
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=212.82 Aligned_cols=240 Identities=18% Similarity=0.223 Sum_probs=143.5
Q ss_pred EecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhC
Q 020630 46 SFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSE 125 (323)
Q Consensus 46 ~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~ 125 (323)
.+++.+ ..+|+|||+||++++.. .|..+++.|++.||+|+++|+||||.|+.... ++++++++|+.++++.+...
T Consensus 8 ~~g~~~-~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~--~~~~~~a~~l~~~l~~l~~~- 82 (264)
T 1r3d_A 8 HFAKPT-ARTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHC--DNFAEAVEMIEQTVQAHVTS- 82 (264)
T ss_dssp ESSCCB-TTBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC---------CHHHHHHHHHHHTTCCT-
T ss_pred ccCCCC-CCCCcEEEEcCCCCCHH-HHHHHHHHhcccCceEEEecCCCCCCCCCCCc--cCHHHHHHHHHHHHHHhCcC-
Confidence 444443 23489999999998877 89999999985689999999999999986433 47889999999999988654
Q ss_pred CCCCCCEEEEEechhHHHHHH---HHhhcCCCCeeEEEEccCccCCCCCCchhHHHH---HHhh-c----cccccccccc
Q 020630 126 PYRDLPAFLFGESMGGAATML---MYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL---FMYG-L----LFGLADTWAA 194 (323)
Q Consensus 126 ~~~~~~~~l~G~S~Gg~~a~~---~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~---~~~~-~----~~~~~~~~~~ 194 (323)
..+++|+||||||.+|+. +|.++|++ |+++|++++............... .... . .......+.
T Consensus 83 ---~~p~~lvGhSmGG~va~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (264)
T 1r3d_A 83 ---EVPVILVGYSLGGRLIMHGLAQGAFSRLN-LRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWY- 157 (264)
T ss_dssp ---TSEEEEEEETHHHHHHHHHHHHTTTTTSE-EEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHT-
T ss_pred ---CCceEEEEECHhHHHHHHHHHHHhhCccc-cceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHh-
Confidence 114999999999999999 88899998 999999987544321110000000 0000 0 000000000
Q ss_pred CCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh-----HHHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
....... .............. . ............. .+..+.+.++++|+++|+|++|..++ .
T Consensus 158 --~~~~~~~-~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~ 224 (264)
T 1r3d_A 158 --QQAVFSS-LNHEQRQTLIAQRS----A-NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----Q 224 (264)
T ss_dssp --TSGGGTT-CCHHHHHHHHHHHT----T-SCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----H
T ss_pred --hhhhhhc-cCHHHHHHHHHHHh----h-cchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----H
Confidence 0000000 00000000000000 0 0000111111100 01123456789999999999998642 3
Q ss_pred HHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+ + .++++++++||++++++| +++.+.|.+|+.++.
T Consensus 225 ~~~~~--~-~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 225 LAESS--G-LSYSQVAQAGHNVHHEQP----QAFAKIVQAMIHSII 263 (264)
T ss_dssp HHHHH--C-SEEEEETTCCSCHHHHCH----HHHHHHHHHHHHHHC
T ss_pred HHHHh--C-CcEEEcCCCCCchhhcCH----HHHHHHHHHHHHHhc
Confidence 44444 2 679999999999996555 679999999998653
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.3e-33 Score=217.57 Aligned_cols=251 Identities=14% Similarity=0.162 Sum_probs=162.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC---CCCChHHHHhhHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC---YLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---~~~~~~~~~~d~~~~ 117 (323)
+++|...++. +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|..... ...+++++++|+.++
T Consensus 18 ~~~~~~~g~~----~~~vv~lHG~~~~~~-~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 91 (282)
T 3qvm_A 18 RNNINITGGG----EKTVLLAHGFGCDQN-MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEI 91 (282)
T ss_dssp HTTCEEEECS----SCEEEEECCTTCCGG-GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHH
T ss_pred hcceeecCCC----CCeEEEECCCCCCcc-hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHH
Confidence 3445555532 489999999998877 88899999987 89999999999999986542 223789999999999
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc------hhHHHHHHhhcccccccc
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK------PSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 191 (323)
++.+.. .+++++||||||.+++.+|.++|++ |+++|+++|......... ...........+......
T Consensus 92 ~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T 3qvm_A 92 LVALDL------VNVSIIGHSVSSIIAGIASTHVGDR-ISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIG 164 (282)
T ss_dssp HHHTTC------CSEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHH
T ss_pred HHHcCC------CceEEEEecccHHHHHHHHHhCchh-hheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhh
Confidence 999864 3899999999999999999999998 999999998764332110 000001110000000000
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh--HHHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
+........... ................ ........+.... .+....+.++++|+++++|++|.++|.+.++.
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 239 (282)
T 3qvm_A 165 WANYLAPLVMGA-SHSSELIGELSGSFCT----TDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQY 239 (282)
T ss_dssp HHHHHHHHHHCT-TSCHHHHHHHHHHHHH----SCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHH
T ss_pred HHHHHHhhccCC-ccchhhHHHHHHHHhc----CCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHH
Confidence 000000000000 0000000000000000 0000111111110 01224567889999999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+ +++++++++++||..++++ .+++.+.|.+||+++.
T Consensus 240 ~~~~~--~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 240 MAENI--PNSQLELIQAEGHCLHMTD----AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHHS--SSEEEEEEEEESSCHHHHC----HHHHHHHHHHHHHHC-
T ss_pred HHHhC--CCCcEEEecCCCCcccccC----HHHHHHHHHHHHHhcC
Confidence 99988 7789999999999999544 5779999999998754
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-31 Score=201.49 Aligned_cols=208 Identities=17% Similarity=0.140 Sum_probs=165.1
Q ss_pred CccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC---
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRC--- 102 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~--- 102 (323)
+..+...+.. +| ++.++.+.|.+ ++|+||++||++++.. |.+..+++.|+++||.|+++|+||+|.|.....
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~--~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~ 86 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG--ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRH 86 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT--CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCS
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC--CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhc
Confidence 3445566665 77 99999998874 5899999999998754 345678899998999999999999998864321
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHh
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 182 (323)
...+++++++|+.++++++..+...+..+++++|||+||.+++.++..+|++ ++++|++++.....
T Consensus 87 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~------------- 152 (223)
T 2o2g_A 87 LRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPET-VQAVVSRGGRPDLA------------- 152 (223)
T ss_dssp STTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCGGGC-------------
T ss_pred ccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCc-eEEEEEeCCCCCcC-------------
Confidence 1247899999999999999987666667999999999999999999999998 99999999753210
Q ss_pred hcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCccc
Q 020630 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
...+.++++|+++++|++|.++
T Consensus 153 ----------------------------------------------------------~~~~~~~~~P~l~i~g~~D~~~ 174 (223)
T 2o2g_A 153 ----------------------------------------------------------PSALPHVKAPTLLIVGGYDLPV 174 (223)
T ss_dssp ----------------------------------------------------------TTTGGGCCSCEEEEEETTCHHH
T ss_pred ----------------------------------------------------------HHHHhcCCCCEEEEEccccCCC
Confidence 1234566899999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+..+.+.+.. ++.++++++++||.+.. .+..+++.+.+.+||++++
T Consensus 175 ~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 175 IAMNEDALEQLQ--TSKRLVIIPRASHLFEE---PGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp HHHHHHHHHHCC--SSEEEEEETTCCTTCCS---TTHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHhhC--CCeEEEEeCCCCcccCC---hHHHHHHHHHHHHHHHHhc
Confidence 865554444432 67899999999999652 2456889999999999875
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=199.36 Aligned_cols=211 Identities=16% Similarity=0.090 Sum_probs=168.4
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC------
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY------ 103 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~------ 103 (323)
++..+.+.+| ++.++.+.|.+ +++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|......
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~-~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 81 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK-APAPVIVIAQDIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQR 81 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS-CSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHH
T ss_pred ceEEEecCCCCeEEEEEECCCC-CCCCEEEEEcCCCCCCH-HHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhh
Confidence 4567788899 89999998875 66899999999998877 788999999999999999999999988642211
Q ss_pred --------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchh
Q 020630 104 --------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 104 --------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~ 175 (323)
..+.+..++|+.++++++..+...+ .+++++|||+||.+++.++..+| +++++++++....
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~---~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 82 EQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY---VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC---SSEEEEESCSSGG-------
T ss_pred hhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC---ccEEEEecCcccc-------
Confidence 1256778899999999998654322 48999999999999999999987 7888887763210
Q ss_pred HHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEe
Q 020630 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
.....+.++++|+++++
T Consensus 151 ---------------------------------------------------------------~~~~~~~~~~~P~l~i~ 167 (236)
T 1zi8_A 151 ---------------------------------------------------------------KQLNKVPEVKHPALFHM 167 (236)
T ss_dssp ---------------------------------------------------------------GCGGGGGGCCSCEEEEE
T ss_pred ---------------------------------------------------------------cchhhhhhcCCCEEEEe
Confidence 01234466789999999
Q ss_pred eCCCcccCchhHHHHHHHhcC-CCCcEEEecCCCccccccCCc----hhHHHHHHHHHHHHHHHHhh
Q 020630 256 GTADGVTCPTSSKLLYEKASS-ADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++|.++|.+.++.+.+.+.. +++++++++++||.+..+.+. +..+++.+.+.+||+++++.
T Consensus 168 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 168 GGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp ETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred cCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999988843 478999999999988865442 23567889999999887643
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-32 Score=223.94 Aligned_cols=262 Identities=14% Similarity=0.128 Sum_probs=163.9
Q ss_pred CC-cEEEEEecCCCCCCceEEEEecCCCCCcchh---hHHHHH---HHhcCCcEEEEecccc--CcCCCCCC-----C--
Q 020630 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWM---FQKICI---SYATWGYAVFAADLLG--HGRSDGIR-----C-- 102 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~---~~~~~~---~l~~~g~~vi~~d~~G--~G~s~~~~-----~-- 102 (323)
+| +++|..+++.+...+|+|||+||++++.. . |..++. .|..+||+|+++|+|| +|.|.... .
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~-~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~ 170 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAH-VTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQ 170 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSC-GGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccc-hhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccc
Confidence 45 78899998764334689999999998876 5 777664 4656789999999999 68886311 1
Q ss_pred -------CCCChHHHHhhHHHHHHHHHhhCCCCCCC-EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch
Q 020630 103 -------YLGDMEKVAASSLSFFKHVRHSEPYRDLP-AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 103 -------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~ 174 (323)
..++++++++|+.++++.++.+ + ++|+||||||.+|+.+|.++|++ |+++|++++........ .
T Consensus 171 ~~~~~~f~~~t~~~~a~dl~~ll~~l~~~------~~~~lvGhSmGG~ial~~A~~~p~~-v~~lVli~~~~~~~~~~-~ 242 (444)
T 2vat_A 171 RPYGAKFPRTTIRDDVRIHRQVLDRLGVR------QIAAVVGASMGGMHTLEWAFFGPEY-VRKIVPIATSCRQSGWC-A 242 (444)
T ss_dssp CBCGGGCCCCCHHHHHHHHHHHHHHHTCC------CEEEEEEETHHHHHHHHHGGGCTTT-BCCEEEESCCSBCCHHH-H
T ss_pred cccccccccccHHHHHHHHHHHHHhcCCc------cceEEEEECHHHHHHHHHHHhChHh-hheEEEEeccccCCccc-h
Confidence 0258999999999999999754 7 89999999999999999999998 99999999876532110 0
Q ss_pred hHHH--HHHhhccccccccccc---CCCc-----ccccc-cccC-hhhHHHhhcCCc-----------------------
Q 020630 175 SKLH--LFMYGLLFGLADTWAA---MPDN-----KMVGK-AIKD-PEKLKVIASNPR----------------------- 219 (323)
Q Consensus 175 ~~~~--~~~~~~~~~~~~~~~~---~~~~-----~~~~~-~~~~-~~~~~~~~~~~~----------------------- 219 (323)
.+.. .........+...... .... ..... .... ......+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (444)
T 2vat_A 243 AWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGN 322 (444)
T ss_dssp HHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------
T ss_pred hHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccc
Confidence 0000 0000000000000000 0000 00000 0000 000000000000
Q ss_pred --------------------ccCCCCCchhHHHHHHhhH----------HHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 220 --------------------RYTGKPRVGTMREIARVCQ----------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 220 --------------------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
.+................. +....+.++++|+|+|+|++|.++|.+.++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~ 402 (444)
T 2vat_A 323 SHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVE 402 (444)
T ss_dssp ------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHH
T ss_pred cccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHH
Confidence 0000000011111111111 0344567889999999999999999999999
Q ss_pred HHHHhcCCCCcEEEec-CCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+ +++++++++ ++||+.++++ .+++.+.|.+||++++
T Consensus 403 l~~~~--p~~~~~~i~~~~GH~~~~e~----p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 403 MGRSI--PNSRLCVVDTNEGHDFFVME----ADKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHHS--TTEEEEECCCSCGGGHHHHT----HHHHHHHHHHHHTC--
T ss_pred HHHHC--CCcEEEEeCCCCCcchHHhC----HHHHHHHHHHHHHHhc
Confidence 99998 789999999 8999999544 5779999999997654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=201.19 Aligned_cols=259 Identities=12% Similarity=0.091 Sum_probs=165.7
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~ 106 (323)
.+..+.+.|| ++.+..+.|.+.+++|+||++||++ ++....+..+.+.|++. |+|+++|+||+|.+ +
T Consensus 4 ~~~~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~--------~ 74 (275)
T 3h04_A 4 IKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEV--------S 74 (275)
T ss_dssp EEEEEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTS--------C
T ss_pred eEEEEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcc--------c
Confidence 4566788899 9999999987655789999999988 44442345788888887 99999999999866 4
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH--HHHHHhh-
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK--LHLFMYG- 183 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~--~~~~~~~- 183 (323)
.....+|+.++++++....+ ..+++|+||||||.+++.+|.+ ++ ++++|+++|............ .......
T Consensus 75 ~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~--~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
T 3h04_A 75 LDCIIEDVYASFDAIQSQYS--NCPIFTFGRSSGAYLSLLIARD--RD-IDGVIDFYGYSRINTEPFKTTNSYYAKIAQS 149 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--TSCEEEEEETHHHHHHHHHHHH--SC-CSEEEEESCCSCSCSHHHHSCCHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHhhCC--CCCEEEEEecHHHHHHHHHhcc--CC-ccEEEeccccccccccccccccchhhccccc
Confidence 56677888888888877643 5699999999999999999998 55 999999999876532110000 0000000
Q ss_pred cccccccccccCCCcccccccccChh-hHHHhhcCC--cc-cCCCC-CchhHHHHHHhhHHHHhcCCcccccEEEEeeCC
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPE-KLKVIASNP--RR-YTGKP-RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
........... ............. ......... .. ..... ..... .. ....+.+++ |+|+++|++
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~-P~lii~G~~ 219 (275)
T 3h04_A 150 INETMIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKY----NI---APDELKTLP-PVFIAHCNG 219 (275)
T ss_dssp SCHHHHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGG----SC---CHHHHTTCC-CEEEEEETT
T ss_pred chHHHHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhcccccccccc----cc---ccchhccCC-CEEEEecCC
Confidence 00000000000 0000000000000 000000000 00 00000 00000 00 011235566 999999999
Q ss_pred CcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.++|.+.++.+.+.+ ++.++++++++||.++.+.+.+ .+++.+.+.+||++++.
T Consensus 220 D~~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~-~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 220 DYDVPVEESEHIMNHV--PHSTFERVNKNEHDFDRRPNDE-AITIYRKVVDFLNAITM 274 (275)
T ss_dssp CSSSCTHHHHHHHTTC--SSEEEEEECSSCSCTTSSCCHH-HHHHHHHHHHHHHHHHC
T ss_pred CCCCChHHHHHHHHhc--CCceEEEeCCCCCCcccCCchh-HHHHHHHHHHHHHHHhc
Confidence 9999999999999888 6788999999999999776642 36789999999998763
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=204.05 Aligned_cols=238 Identities=18% Similarity=0.186 Sum_probs=159.1
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+|+|..+++. +++|+|||+||++++.. .|. ....|. +||+|+++|+||+|.|+... .++++++++|+.++++.
T Consensus 4 ~l~y~~~g~~--~~~~~vv~~hG~~~~~~-~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~ 76 (245)
T 3e0x_A 4 MLHYVHVGNK--KSPNTLLFVHGSGCNLK-IFG-ELEKYL-EDYNCILLDLKGHGESKGQC--PSTVYGYIDNVANFITN 76 (245)
T ss_dssp CCCEEEEECT--TCSCEEEEECCTTCCGG-GGT-TGGGGC-TTSEEEEECCTTSTTCCSCC--CSSHHHHHHHHHHHHHH
T ss_pred eeEEEecCCC--CCCCEEEEEeCCcccHH-HHH-HHHHHH-hCCEEEEecCCCCCCCCCCC--CcCHHHHHHHHHHHHHh
Confidence 7889988875 34889999999998876 677 777776 68999999999999998433 34899999999999943
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhh-cCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc-cccccccccCCCc
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-FGLADTWAAMPDN 198 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (323)
....... . +++++|||+||.+++.+|.+ +|+ |+++|+++|.......... ....+.... ......
T Consensus 77 ~~~~~~~-~-~~~l~G~S~Gg~~a~~~a~~~~p~--v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------- 143 (245)
T 3e0x_A 77 SEVTKHQ-K-NITLIGYSMGGAIVLGVALKKLPN--VRKVVSLSGGARFDKLDKD--FMEKIYHNQLDNNYLL------- 143 (245)
T ss_dssp CTTTTTC-S-CEEEEEETHHHHHHHHHHTTTCTT--EEEEEEESCCSBCTTSCHH--HHHHHHTTCCCHHHHH-------
T ss_pred hhhHhhc-C-ceEEEEeChhHHHHHHHHHHhCcc--ccEEEEecCCCccccccHH--HHHHHHHHHHHhhcCc-------
Confidence 3322221 2 89999999999999999999 998 9999999998765322211 111111110 000000
Q ss_pred ccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcC
Q 020630 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS 276 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 276 (323)
.................... ............. +....+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-- 214 (245)
T 3e0x_A 144 -ECIGGIDNPLSEKYFETLEK------DPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV-- 214 (245)
T ss_dssp -HHHTCSCSHHHHHHHTTSCS------SHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS--
T ss_pred -ccccccchHHHHHHHHHHhc------CcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc--
Confidence 00000011111111110000 1111111111111 123456788999999999999999999999999988
Q ss_pred CCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 277 ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 277 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+++++++++++||..+.++ .+++.+.|.+||
T Consensus 215 ~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl 245 (245)
T 3e0x_A 215 ENSELKIFETGKHFLLVVN----AKGVAEEIKNFI 245 (245)
T ss_dssp SSEEEEEESSCGGGHHHHT----HHHHHHHHHTTC
T ss_pred CCceEEEeCCCCcceEEec----HHHHHHHHHhhC
Confidence 7799999999999999544 466778887774
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=219.03 Aligned_cols=259 Identities=14% Similarity=0.187 Sum_probs=164.4
Q ss_pred CCC-cEEEEEecCCCCCCceEEEEecCCCCCcchh---------hHHHHH---HHhcCCcEEEEecccc-CcCCCCCCC-
Q 020630 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWM---------FQKICI---SYATWGYAVFAADLLG-HGRSDGIRC- 102 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~---------~~~~~~---~l~~~g~~vi~~d~~G-~G~s~~~~~- 102 (323)
.+| +|+|..+++.+...+|+|||+||++++.. . |..+++ .|+++||+|+++|+|| +|.|+.+..
T Consensus 41 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~ 119 (377)
T 2b61_A 41 LSYINVAYQTYGTLNDEKNNAVLICHALTGDAE-PYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSI 119 (377)
T ss_dssp ECSEEEEEEEESCCCTTCCCEEEEECCTTCCSC-SCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSB
T ss_pred ecceeEEEEecccccccCCCeEEEeCCCCCccc-cccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCccc
Confidence 367 89999998764334689999999998876 5 777764 3767799999999999 688875521
Q ss_pred ------------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEE-EEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 103 ------------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 103 ------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
..++++++++|+.++++.+... +++ |+||||||.+|+.+|.++|++ |+++|++++.....
T Consensus 120 ~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~------~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 192 (377)
T 2b61_A 120 NPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS------HLKAIIGGSFGGMQANQWAIDYPDF-MDNIVNLCSSIYFS 192 (377)
T ss_dssp CTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC------CEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSSCC
T ss_pred CccccccccccCCcccHHHHHHHHHHHHHHcCCc------ceeEEEEEChhHHHHHHHHHHCchh-hheeEEeccCcccc
Confidence 0358999999999999988654 787 999999999999999999998 99999999875432
Q ss_pred CCCchhHHHHHHhhccccccccccc--C-----CCc-----ccccc-cccC-h---------------------hhHHHh
Q 020630 170 ENMKPSKLHLFMYGLLFGLADTWAA--M-----PDN-----KMVGK-AIKD-P---------------------EKLKVI 214 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~-----~~~~~-~~~~-~---------------------~~~~~~ 214 (323)
... ... .......+.. .+.+.. . ... ..... .... . ......
T Consensus 193 ~~~-~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (377)
T 2b61_A 193 AEA-IGF-NHVMRQAVIN-DPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYL 269 (377)
T ss_dssp HHH-HHH-HHHHHHHHHT-STTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHH
T ss_pred ccc-hhH-HHHHHHHHhc-CccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHH
Confidence 100 000 0000000000 000000 0 000 00000 0000 0 000000
Q ss_pred hcCCcccCCCCCchhHHHHHHhhH---------HHHhcCCcccccEEEEeeCCCcccCc----hhHHHHHHHhcCCCCcE
Q 020630 215 ASNPRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCP----TSSKLLYEKASSADKSI 281 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~ 281 (323)
......+................. +....+.++++|+|+|+|++|.++|+ +.++.+.+.+ +++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~--~~~~~ 347 (377)
T 2b61_A 270 SYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG--VDLHF 347 (377)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT--CEEEE
T ss_pred HhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcC--CCceE
Confidence 000000000001111111111111 11345678899999999999999999 7788888877 77899
Q ss_pred EEec-CCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 282 KIYD-GMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 282 ~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++ ++||+.++++| +++.+.|.+||++
T Consensus 348 ~~i~~~~gH~~~~e~p----~~~~~~i~~fl~~ 376 (377)
T 2b61_A 348 YEFPSDYGHDAFLVDY----DQFEKRIRDGLAG 376 (377)
T ss_dssp EEECCTTGGGHHHHCH----HHHHHHHHHHHHT
T ss_pred EEeCCCCCchhhhcCH----HHHHHHHHHHHhc
Confidence 9999 99999996554 6799999999864
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=201.61 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=100.9
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC----CCChH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY----LGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~----~~~~~ 108 (323)
.+...+| +++|...+. +++|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|..+... .++.+
T Consensus 8 ~~~~~~~~~~~~~~~g~-----g~~~vllHG~~~~~~-~w~~~~~~l~~-~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~ 80 (291)
T 3qyj_A 8 TIVDTTEARINLVKAGH-----GAPLLLLHGYPQTHV-MWHKIAPLLAN-NFTVVATDLRGYGDSSRPASVPHHINYSKR 80 (291)
T ss_dssp EEEECSSCEEEEEEECC-----SSEEEEECCTTCCGG-GGTTTHHHHTT-TSEEEEECCTTSTTSCCCCCCGGGGGGSHH
T ss_pred eEEecCCeEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccccccCHH
Confidence 3445567 999988763 578999999998876 89889988875 699999999999999865432 25789
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
.+++|+.++++.+..+ +++++||||||.+|+.+|.++|++ |+++|++++.
T Consensus 81 ~~~~~~~~~~~~l~~~------~~~l~GhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~ 130 (291)
T 3qyj_A 81 VMAQDQVEVMSKLGYE------QFYVVGHDRGARVAHRLALDHPHR-VKKLALLDIA 130 (291)
T ss_dssp HHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCC
T ss_pred HHHHHHHHHHHHcCCC------CEEEEEEChHHHHHHHHHHhCchh-ccEEEEECCC
Confidence 9999999999988744 899999999999999999999999 9999999864
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=190.07 Aligned_cols=203 Identities=15% Similarity=0.110 Sum_probs=162.3
Q ss_pred ccceeEEecCCCcEEEEEecCCCC--CCceEEEEecCCC---CC-cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC
Q 020630 29 RNGKEYFETPNGKLFTQSFLPLDQ--KVKATVYMTHGYG---SD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~--~~~~~vv~~hG~~---~~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~ 102 (323)
..+...+.+.+|++.++.+.|.+. +++|+||++||++ ++ ....|..+++.|+++||.|+++|+||+|.|.....
T Consensus 9 ~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 88 (220)
T 2fuk_A 9 ESAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD 88 (220)
T ss_dssp SCEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC
T ss_pred cceEEEEeCCCCeEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcc
Confidence 346677888888888889988775 4589999999953 22 22357889999999999999999999999986542
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHh
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 182 (323)
.....++|+.++++++....+ ..+++++|||+||.+++.++.++ + |+++|++++......
T Consensus 89 ---~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--~-v~~~v~~~~~~~~~~------------ 148 (220)
T 2fuk_A 89 ---HGDGEQDDLRAVAEWVRAQRP--TDTLWLAGFSFGAYVSLRAAAAL--E-PQVLISIAPPAGRWD------------ 148 (220)
T ss_dssp ---TTTHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHH--C-CSEEEEESCCBTTBC------------
T ss_pred ---cCchhHHHHHHHHHHHHhcCC--CCcEEEEEECHHHHHHHHHHhhc--c-ccEEEEecccccchh------------
Confidence 346678999999999988753 56899999999999999999988 5 999999998765321
Q ss_pred hcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCccc
Q 020630 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
+ ..+. ..+|+++++|++|.++
T Consensus 149 --------------------------------------~--------------------~~~~-~~~p~l~i~g~~D~~~ 169 (220)
T 2fuk_A 149 --------------------------------------F--------------------SDVQ-PPAQWLVIQGDADEIV 169 (220)
T ss_dssp --------------------------------------C--------------------TTCC-CCSSEEEEEETTCSSS
T ss_pred --------------------------------------h--------------------hhcc-cCCcEEEEECCCCccc
Confidence 0 0011 1579999999999999
Q ss_pred CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+.++.+.+.+. +++++++++++||.+.. + .+++.+.+.+|+.+.++
T Consensus 170 ~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~-~----~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 170 DPQAVYDWLETLE-QQPTLVRMPDTSHFFHR-K----LIDLRGALQHGVRRWLP 217 (220)
T ss_dssp CHHHHHHHHTTCS-SCCEEEEETTCCTTCTT-C----HHHHHHHHHHHHGGGCS
T ss_pred CHHHHHHHHHHhC-cCCcEEEeCCCCceehh-h----HHHHHHHHHHHHHHHhh
Confidence 9999999988875 57899999999999884 2 45688888888877654
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-33 Score=222.43 Aligned_cols=260 Identities=12% Similarity=0.065 Sum_probs=161.2
Q ss_pred ecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC----CCCCChHHH
Q 020630 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR----CYLGDMEKV 110 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~----~~~~~~~~~ 110 (323)
...+| +++|...+. +|+|||+||++++.. .|..+++.|+ +||+|+++|+||||.|..+. ...++++++
T Consensus 10 ~~~~g~~~~~~~~g~-----~p~vv~lHG~~~~~~-~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~ 82 (304)
T 3b12_A 10 VDVGDVTINCVVGGS-----GPALLLLHGFPQNLH-MWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAM 82 (304)
Confidence 34477 999888762 678999999998876 8999999998 68999999999999998763 334588999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH-HHh-----h-
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL-FMY-----G- 183 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~-~~~-----~- 183 (323)
++|+.++++.+..+ +++|+||||||.+++.+|.++|++ |+++|++++............... ... .
T Consensus 83 ~~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
T 3b12_A 83 ASDQRELMRTLGFE------RFHLVGHARGGRTGHRMALDHPDS-VLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQ 155 (304)
Confidence 99999999998654 899999999999999999999998 999999998755332111000000 000 0
Q ss_pred ---cccccccccccCCCcc-cccccccCh--hhHHHhhcCCcccCCCCCchhHHHHHHhh------HHHHhcCCcccccE
Q 020630 184 ---LLFGLADTWAAMPDNK-MVGKAIKDP--EKLKVIASNPRRYTGKPRVGTMREIARVC------QYIQDNFSKVTVPF 251 (323)
Q Consensus 184 ---~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~ 251 (323)
....+........... +........ .........................+... ......+.++++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 235 (304)
T 3b12_A 156 PAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPA 235 (304)
Confidence 0000000000000000 000000000 00000000000000000000011111100 00111267889999
Q ss_pred EEEeeCCCccc-CchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 252 LTVHGTADGVT-CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 252 l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+|+|++|..+ +....+.+.+.. +++++.++ ++||++++++| +++.+.|.+||++...
T Consensus 236 lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p----~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 236 LVFSGSAGLMHSLFEMQVVWAPRL--ANMRFASL-PGGHFFVDRFP----DDTARILREFLSDARS 294 (304)
Confidence 99999999544 556666666665 67888889 99999997666 5688999999987754
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-29 Score=202.91 Aligned_cols=276 Identities=14% Similarity=0.103 Sum_probs=172.3
Q ss_pred CCccceeEEecCCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhH-HHHHHHhcCCcEEEEeccccCcCCCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ-KICISYATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~vi~~d~~G~G~s~~~~~ 102 (323)
.+..+...+.+.|| ++.+..+.|.+ .++.|+||++||++++.. .|. .+++.|+++||.|+++|+||+|.|.+...
T Consensus 65 ~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 143 (367)
T 2hdw_A 65 KVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKE-QSSGLYAQTMAERGFVTLAFDPSYTGESGGQPR 143 (367)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTT-SHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSS
T ss_pred CceeEEEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcch-hhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCc
Confidence 34556777888889 99999998765 356799999999998766 555 48899999999999999999999986654
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC-------CCCCCchh
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV-------IPENMKPS 175 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~-------~~~~~~~~ 175 (323)
...+....++|+.++++++.....++..+++++|||+||.+++.+|..+|+ |+++|+++|... ........
T Consensus 144 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~~~v~~~p~~~~~~~~~~~~~~~~~~ 221 (367)
T 2hdw_A 144 NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKR--VKAVVTSTMYDMTRVMSKGYNDSVTLE 221 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCCHHHHHHHTTTTCCCHH
T ss_pred cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCC--ccEEEEeccccccHHHhhhhccccchH
Confidence 444577889999999999987654345689999999999999999999884 999999987531 00000000
Q ss_pred HHHHHHhhc----cccccc-ccccCCCcccccccccCh---hhHHHhhcC----Ccc--cCCCCCchhHHHHHHhhHHHH
Q 020630 176 KLHLFMYGL----LFGLAD-TWAAMPDNKMVGKAIKDP---EKLKVIASN----PRR--YTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 176 ~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~ 241 (323)
......... ...+.. ..........+.. .... .....+... +.. ............+.. .+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 298 (367)
T 2hdw_A 222 QRTRTLEQLGQQRWKDAESGTPAYQPPYNELKG-GEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN--MPIL 298 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCS-CCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT--SCSC
T ss_pred HHHHHHHHHHHHHHHHhccCCceeecCCCcccc-ccccccCCccceeecccccCcccccccchhhhhhHHHhcC--CChh
Confidence 000000000 000000 0000000000000 0000 001111100 000 000000000111000 0012
Q ss_pred hcCCccc-ccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 242 DNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 242 ~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+.+++ +|+|+++|++|. +.+.++.+++.. .+++++++++++||..++++++.. +.+.+.+||+++
T Consensus 299 ~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~-~~~~~~~~~~g~gH~~~~~~~~~~---~~~~i~~fl~~~ 366 (367)
T 2hdw_A 299 TYIKEISPRPILLIHGERAH--SRYFSETAYAAA-AEPKELLIVPGASHVDLYDRLDRI---PFDRIAGFFDEH 366 (367)
T ss_dssp TTGGGGTTSCEEEEEETTCT--THHHHHHHHHHS-CSSEEEEEETTCCTTHHHHCTTTS---CHHHHHHHHHHH
T ss_pred HhHHhhcCCceEEEecCCCC--CHHHHHHHHHhC-CCCeeEEEeCCCCeeeeecCchhH---HHHHHHHHHHhh
Confidence 3466788 999999999998 778888887763 467899999999999876666432 678889999875
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-30 Score=195.87 Aligned_cols=220 Identities=15% Similarity=0.112 Sum_probs=165.3
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCC-CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC-
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY- 103 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~- 103 (323)
++..+...+.. +| ++.++.+.|.+. ++.|+||++||++++.. .|..+++.|+++||.|+++|++|+|.+......
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~ 80 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNADGPLPIVIVVQEIFGVHE-HIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI 80 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCH-HHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH
T ss_pred cceeeeEEEec-CCcceEEEEecCCCCCCCCCEEEEEcCcCccCH-HHHHHHHHHHHCCcEEEEecccccCCCCCchhhH
Confidence 34456667777 77 999999988764 45799999999998876 789999999999999999999999877543221
Q ss_pred ---------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch
Q 020630 104 ---------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 104 ---------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~ 174 (323)
..+.+...+|+.++++++.... ++..+++++||||||.+++.++.++|+ +.+++++.+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~v~~~~~~~~~~~~-- 155 (241)
T 3f67_A 81 PTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ--LKAAVAWYGKLVGEKSL-- 155 (241)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT--CCEEEEESCCCSCCCCS--
T ss_pred HHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC--cceEEEEeccccCCCcc--
Confidence 0134567899999999998664 334589999999999999999999887 67777655442211000
Q ss_pred hHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEE
Q 020630 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
+ .. .+ ....+.++++|++++
T Consensus 156 -----------------~---------~~--~~--------------------------------~~~~~~~~~~P~l~~ 175 (241)
T 3f67_A 156 -----------------N---------SP--KH--------------------------------PVDIAVDLNAPVLGL 175 (241)
T ss_dssp -----------------S---------SC--CC--------------------------------HHHHGGGCCSCEEEE
T ss_pred -----------------C---------Cc--cC--------------------------------HHHhhhhcCCCEEEE
Confidence 0 00 00 123345678999999
Q ss_pred eeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCC----chhHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP----DENANLVLKDMREWIDE 313 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~----~~~~~~~~~~i~~fl~~ 313 (323)
+|++|.++|.+.++.+.+.+. +++++++++++++|.+..+.+ .+..++..+.+.+||++
T Consensus 176 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 176 YGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp EETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred EecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999988874 357899999999999874322 34457788899999864
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=205.66 Aligned_cols=127 Identities=12% Similarity=0.151 Sum_probs=110.4
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC---------CcEEEEeccccCcCCCCCC
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW---------GYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---------g~~vi~~d~~G~G~s~~~~ 101 (323)
..+.+..+| +|+|....+.+ ..+++|||+||++++.. .|..+++.|.+. ||+|+++|+||||.|+...
T Consensus 69 ~~~~~~i~g~~i~~~~~~~~~-~~~~plll~HG~~~s~~-~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~ 146 (388)
T 4i19_A 69 PQFTTEIDGATIHFLHVRSPE-PDATPMVITHGWPGTPV-EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLK 146 (388)
T ss_dssp CEEEEEETTEEEEEEEECCSS-TTCEEEEEECCTTCCGG-GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCS
T ss_pred CcEEEEECCeEEEEEEccCCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 345667789 99999887654 45789999999999877 889999999875 8999999999999999876
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
...++++++++++.++++.++.+ +++++||||||.+++.+|.++|++ |++++++++...
T Consensus 147 ~~~~~~~~~a~~~~~l~~~lg~~------~~~l~G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 205 (388)
T 4i19_A 147 SAGWELGRIAMAWSKLMASLGYE------RYIAQGGDIGAFTSLLLGAIDPSH-LAGIHVNLLQTN 205 (388)
T ss_dssp SCCCCHHHHHHHHHHHHHHTTCS------SEEEEESTHHHHHHHHHHHHCGGG-EEEEEESSCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCCC------cEEEEeccHHHHHHHHHHHhChhh-ceEEEEecCCCC
Confidence 54568999999999999998643 899999999999999999999999 999999997654
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=208.05 Aligned_cols=244 Identities=16% Similarity=0.172 Sum_probs=168.0
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC---
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC--- 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~--- 102 (323)
.+..++..+.+.+| +|.++.+.|.+.++.|+||++||++++.. .|..+. .+.++||.|+++|+||+|.|.....
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~-~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~ 156 (346)
T 3fcy_A 79 FAECYDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSG-DWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVT 156 (346)
T ss_dssp TEEEEEEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSC-CSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCS
T ss_pred ceEEEEEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCC-Chhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccC
Confidence 34456677888899 99999999876567899999999998876 666665 4557799999999999999875432
Q ss_pred ----------------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 103 ----------------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 103 ----------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
..+.+....+|+.++++++.....++..+++++|||+||.+|+.+|..+|+ |+++|+++|..
T Consensus 157 ~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~--v~~~vl~~p~~ 234 (346)
T 3fcy_A 157 GNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR--VRKVVSEYPFL 234 (346)
T ss_dssp SCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT--CCEEEEESCSS
T ss_pred CCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc--ccEEEECCCcc
Confidence 112355778999999999987654445689999999999999999999987 99999998864
Q ss_pred CCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhh-cCCcccCCCCCchhHHHHHHhhHHHHhcCC
Q 020630 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
... . ....... ... .......... ..+. ............. .+....+.
T Consensus 235 ~~~-----~----~~~~~~~----------~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~d~~~~~~ 284 (346)
T 3fcy_A 235 SDY-----K----RVWDLDL----------AKN------AYQEITDYFRLFDPR----HERENEVFTKLGY-IDVKNLAK 284 (346)
T ss_dssp CCH-----H----HHHHTTC----------CCG------GGHHHHHHHHHHCTT----CTTHHHHHHHHGG-GCHHHHGG
T ss_pred cCH-----H----HHhhccc----------ccc------chHHHHHHHHhcCCC----cchHHHHHHHhCc-ccHHHHHH
Confidence 310 0 0000000 000 0000000000 0000 0000000000000 01234567
Q ss_pred cccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++|+|+++|++|.++|++.+..+++.+.+ ++++++++++||..+ . ++.+.+.+||++
T Consensus 285 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~----~----~~~~~i~~fl~~ 343 (346)
T 3fcy_A 285 RIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVYPDYGHEPM----R----GFGDLAMQFMLE 343 (346)
T ss_dssp GCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEETTCCSSCC----T----THHHHHHHHHHT
T ss_pred hcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEeCCCCCcCH----H----HHHHHHHHHHHH
Confidence 7899999999999999999999999988853 689999999999998 2 367788889875
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-29 Score=200.24 Aligned_cols=115 Identities=17% Similarity=0.134 Sum_probs=95.2
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~ 119 (323)
+++|+..+. .+|+|||+||++++.. .|..+++.|++ .+|+|+++|+||||.|+......++++++++|+.++++
T Consensus 28 ~~~~~~~g~----~~p~lvllHG~~~~~~-~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~ 102 (316)
T 3c5v_A 28 TFRVYKSGS----EGPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVE 102 (316)
T ss_dssp EEEEEEECS----SSCEEEEECCTTCCGG-GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHH
T ss_pred EEEEEecCC----CCcEEEEECCCCcccc-cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 577777653 2678999999998766 89999999986 26999999999999998655445689999999999999
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~ 165 (323)
.+.... ..+++|+||||||.+|+.+|.+ +|+ |+++|++++.
T Consensus 103 ~l~~~~---~~~~~lvGhSmGG~ia~~~A~~~~~p~--v~~lvl~~~~ 145 (316)
T 3c5v_A 103 AMYGDL---PPPIMLIGHSMGGAIAVHTASSNLVPS--LLGLCMIDVV 145 (316)
T ss_dssp HHHTTC---CCCEEEEEETHHHHHHHHHHHTTCCTT--EEEEEEESCC
T ss_pred HHhccC---CCCeEEEEECHHHHHHHHHHhhccCCC--cceEEEEccc
Confidence 995321 1389999999999999999986 454 9999999864
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-29 Score=203.09 Aligned_cols=240 Identities=15% Similarity=0.124 Sum_probs=163.4
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
....++..++. +| +|.++.+.|.+.++.|+||++||++++.. .|......|+++||.|+++|+||+|.|........
T Consensus 124 ~~~~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~ 201 (386)
T 2jbw_A 124 SPPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAG 201 (386)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCS
T ss_pred CCCeEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHH-HHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCc
Confidence 44556777777 78 99999999876566899999999998766 34445788888999999999999999943333334
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
++.+.+.++.+++... ...+..+++|+|||+||.+++.++.. +++ |+++|++ +.......... +
T Consensus 202 ~~~~~~~~~~~~l~~~---~~~~~~~i~l~G~S~GG~la~~~a~~-~~~-~~a~v~~-~~~~~~~~~~~----------~ 265 (386)
T 2jbw_A 202 DYEKYTSAVVDLLTKL---EAIRNDAIGVLGRSLGGNYALKSAAC-EPR-LAACISW-GGFSDLDYWDL----------E 265 (386)
T ss_dssp CHHHHHHHHHHHHHHC---TTEEEEEEEEEEETHHHHHHHHHHHH-CTT-CCEEEEE-SCCSCSTTGGG----------S
T ss_pred cHHHHHHHHHHHHHhC---CCcCcccEEEEEEChHHHHHHHHHcC-Ccc-eeEEEEe-ccCChHHHHHh----------c
Confidence 5665555555555542 21224589999999999999999999 777 9999999 77654322110 0
Q ss_pred cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHH-HHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR-EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
. ... ...... ........... ...... .....+.++++|+|+++|++|. +++
T Consensus 266 ~------------~~~---------~~~~~~----~~g~~~~~~~~~~~~~~~-~~~~~~~~i~~P~Lii~G~~D~-v~~ 318 (386)
T 2jbw_A 266 T------------PLT---------KESWKY----VSKVDTLEEARLHVHAAL-ETRDVLSQIACPTYILHGVHDE-VPL 318 (386)
T ss_dssp C------------HHH---------HHHHHH----HTTCSSHHHHHHHHHHHT-CCTTTGGGCCSCEEEEEETTSS-SCT
T ss_pred c------------HHH---------HHHHHH----HhCCCCHHHHHHHHHHhC-ChhhhhcccCCCEEEEECCCCC-CCH
Confidence 0 000 000000 00000000000 000000 0123467788999999999999 999
Q ss_pred hhHHHHHHHh-cCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 265 TSSKLLYEKA-SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 265 ~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.++.+.+.+ .. ++++++++++||... ++ .+.+.+.|.+||+++++.
T Consensus 319 ~~~~~l~~~l~~~-~~~~~~~~~~gH~~~-~~----~~~~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 319 SFVDTVLELVPAE-HLNLVVEKDGDHCCH-NL----GIRPRLEMADWLYDVLVA 366 (386)
T ss_dssp HHHHHHHHHSCGG-GEEEEEETTCCGGGG-GG----TTHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhcCC-CcEEEEeCCCCcCCc-cc----hHHHHHHHHHHHHHhcCC
Confidence 9999999988 53 689999999999764 33 356889999999998864
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=204.16 Aligned_cols=248 Identities=18% Similarity=0.181 Sum_probs=155.1
Q ss_pred ceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC--CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 31 GKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG--SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
+..++.+.+|.+++. +.+ + +|+|||+||+| ++.. .|..+++.|. +||+|+++|+||||.|+......++++
T Consensus 22 ~~~~v~~~~~~~~~~-~~~-~---~p~vv~lHG~G~~~~~~-~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~~~~~~ 94 (292)
T 3l80_A 22 NKEMVNTLLGPIYTC-HRE-G---NPCFVFLSGAGFFSTAD-NFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVGLR 94 (292)
T ss_dssp EEEEECCTTSCEEEE-EEC-C---SSEEEEECCSSSCCHHH-HTHHHHTTSC-TTSEEEEECCTTSTTSCCCCCTTCCHH
T ss_pred CcceEEecCceEEEe-cCC-C---CCEEEEEcCCCCCcHHH-HHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCcccccHH
Confidence 445556655588776 222 2 68999999654 3344 8899998887 589999999999999985445456999
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC------CCCCchhHHHHHHh
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI------PENMKPSKLHLFMY 182 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~------~~~~~~~~~~~~~~ 182 (323)
++++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|+++|.... ........ .. ..
T Consensus 95 ~~~~~l~~~l~~~~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~-~~ 165 (292)
T 3l80_A 95 DWVNAILMIFEHFKFQ------SYLLCVHSIGGFAALQIMNQSSKA-CLGFIGLEPTTVMIYRAGFSSDLYPQL-AL-RR 165 (292)
T ss_dssp HHHHHHHHHHHHSCCS------EEEEEEETTHHHHHHHHHHHCSSE-EEEEEEESCCCHHHHHHCTTSSSSHHH-HH-HH
T ss_pred HHHHHHHHHHHHhCCC------CeEEEEEchhHHHHHHHHHhCchh-eeeEEEECCCCcchhhhccccccchhH-HH-HH
Confidence 9999999999998644 899999999999999999999999 9999999964321 00000000 00 00
Q ss_pred hcccccccccccCCCcccccccccCh-----------hhHHHhhcCC-cccCCCCCchhHHHHHHhhHHHHhcCCccccc
Q 020630 183 GLLFGLADTWAAMPDNKMVGKAIKDP-----------EKLKVIASNP-RRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 250 (323)
..+........ .........+... .......... .......... ..+..+.+.+ ++|
T Consensus 166 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~l~~-~~P 234 (292)
T 3l80_A 166 QKLKTAADRLN--YLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALG--------EEDFKTGISE-KIP 234 (292)
T ss_dssp HTCCSHHHHHH--HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCC--------GGGGCCCCCT-TSC
T ss_pred HHHhccCchhh--hHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhc--------chhhhhccCC-CCC
Confidence 00000000000 0000000000000 0000000010 0000000000 0001134556 899
Q ss_pred EEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++++|++|..++++ + .+.+.+ ++.+ ++++++||++++++| +++.+.|.+||+++
T Consensus 235 ~lii~g~~D~~~~~~-~-~~~~~~--~~~~-~~~~~~gH~~~~e~p----~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 235 SIVFSESFREKEYLE-S-EYLNKH--TQTK-LILCGQHHYLHWSET----NSILEKVEQLLSNH 289 (292)
T ss_dssp EEEEECGGGHHHHHT-S-TTCCCC--TTCE-EEECCSSSCHHHHCH----HHHHHHHHHHHHTC
T ss_pred EEEEEccCccccchH-H-HHhccC--CCce-eeeCCCCCcchhhCH----HHHHHHHHHHHHhc
Confidence 999999999999888 6 666665 6677 999999999996554 67899999999753
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-28 Score=193.01 Aligned_cols=227 Identities=9% Similarity=0.060 Sum_probs=150.2
Q ss_pred ceeEEecCCC-cEEEEEecCC------CCCCceEEEEecC---CCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPL------DQKVKATVYMTHG---YGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~------~~~~~~~vv~~hG---~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~ 100 (323)
+...+ ..+| .+.+..|.|. ...+.|+||++|| .+++.. .|..+++.|+++||.|+++|+||+|.++.
T Consensus 5 ~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~- 81 (277)
T 3bxp_A 5 EQRTL-NTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR-EEAPIATRMMAAGMHTVVLNYQLIVGDQS- 81 (277)
T ss_dssp EEEEE-CSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT-THHHHHHHHHHTTCEEEEEECCCSTTTCC-
T ss_pred EEEEe-ccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc-cchHHHHHHHHCCCEEEEEecccCCCCCc-
Confidence 44455 3456 8888888886 2356899999999 444444 78889999999999999999999995433
Q ss_pred CCCCCChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhc--------------CCCCeeEEEEcc
Q 020630 101 RCYLGDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQS--------------EPNTWTGLIFSA 163 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~--------------p~~~v~~~il~~ 163 (323)
......+|+.++++++.... +++..+++++||||||.+|+.++.++ +.+ ++++|+++
T Consensus 82 -----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 155 (277)
T 3bxp_A 82 -----VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQ-HAAIILGY 155 (277)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCC-CSEEEEES
T ss_pred -----cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCC-cCEEEEeC
Confidence 23344566666666654431 11245899999999999999999885 566 99999999
Q ss_pred CccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhc
Q 020630 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
|............... ..... ..... .....
T Consensus 156 p~~~~~~~~~~~~~~~-------------------------------~~~~~-~~~~~-----------------~~~~~ 186 (277)
T 3bxp_A 156 PVIDLTAGFPTTSAAR-------------------------------NQITT-DARLW-----------------AAQRL 186 (277)
T ss_dssp CCCBTTSSSSSSHHHH-------------------------------HHHCS-CGGGS-----------------BGGGG
T ss_pred CcccCCCCCCCccccc-------------------------------hhccc-hhhhc-----------------CHhhc
Confidence 8765332211100000 00000 00000 01233
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCC-----------chhHHHHHHHHHHH
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-----------DENANLVLKDMREW 310 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-----------~~~~~~~~~~i~~f 310 (323)
+.++.+|+|+++|++|.++|++.++.+.+.+. +.+++++++++++|.+....+ .+..+++.+.+.+|
T Consensus 187 ~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 266 (277)
T 3bxp_A 187 VTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRW 266 (277)
T ss_dssp CCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHH
Confidence 45667899999999999999999998888873 345689999999997765543 23467788999999
Q ss_pred HHHHH
Q 020630 311 IDERV 315 (323)
Q Consensus 311 l~~~~ 315 (323)
|+++.
T Consensus 267 l~~~~ 271 (277)
T 3bxp_A 267 LQEQG 271 (277)
T ss_dssp HHHTT
T ss_pred HHhcc
Confidence 98753
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-29 Score=191.69 Aligned_cols=209 Identities=16% Similarity=0.193 Sum_probs=145.6
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC----
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL---- 104 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~---- 104 (323)
++.+....|| +|..+.|.|.+..+.|+||++||++++.. ..+..+++.|+++||.|+++|+||||.|.......
T Consensus 31 e~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~ 110 (259)
T 4ao6_A 31 ERGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTD 110 (259)
T ss_dssp EEEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CC
T ss_pred EEEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccch
Confidence 4445556799 99999999987777899999999997742 25778899999999999999999999987432210
Q ss_pred --------------CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC
Q 020630 105 --------------GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 105 --------------~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~ 170 (323)
........|..+.++.+..... ..++.++|+|+||.+++.++...|. ++++|+..+......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d--~~rv~~~G~S~GG~~a~~~a~~~pr--i~Aav~~~~~~~~~~ 186 (259)
T 4ao6_A 111 VVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEG--PRPTGWWGLSMGTMMGLPVTASDKR--IKVALLGLMGVEGVN 186 (259)
T ss_dssp GGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHC--CCCEEEEECTHHHHHHHHHHHHCTT--EEEEEEESCCTTSTT
T ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccC--CceEEEEeechhHHHHHHHHhcCCc--eEEEEEecccccccc
Confidence 0122334566667776655432 6699999999999999999999887 777776543321100
Q ss_pred CCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc
Q 020630 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 250 (323)
.........++++|
T Consensus 187 ------------------------------------------------------------------~~~~~~~a~~i~~P 200 (259)
T 4ao6_A 187 ------------------------------------------------------------------GEDLVRLAPQVTCP 200 (259)
T ss_dssp ------------------------------------------------------------------HHHHHHHGGGCCSC
T ss_pred ------------------------------------------------------------------ccchhhhhccCCCC
Confidence 00022345678999
Q ss_pred EEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+++|++|.++|++.++.+++.+.+++.+++++++ +|... | ..+..+.+.+||+++++
T Consensus 201 ~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~---p---~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 201 VRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV---P---TWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC---C---HHHHTHHHHHHHHHHCC
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc---C---HHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999777788888886 67554 2 24577888999999863
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-28 Score=190.76 Aligned_cols=232 Identities=12% Similarity=0.129 Sum_probs=169.0
Q ss_pred eeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 32 KEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
...+...+| ++.++...+.. .++.|+||++||.+ ++.. .+..+++.|+++||.|+++|+||+|.|...
T Consensus 16 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---- 90 (276)
T 3hxk_A 16 KSTFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQR-ESDPLALAFLAQGYQVLLLNYTVMNKGTNY---- 90 (276)
T ss_dssp EEECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGG-GSHHHHHHHHHTTCEEEEEECCCTTSCCCS----
T ss_pred cccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCch-hhHHHHHHHHHCCCEEEEecCccCCCcCCC----
Confidence 345667788 88877766542 14579999999954 3334 678899999999999999999999997633
Q ss_pred CChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhh-cCCCCeeEEEEccCccCCCCCCchhHHHHH
Q 020630 105 GDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~il~~~~~~~~~~~~~~~~~~~ 180 (323)
..+....+|+.++++++.... .++..+++|+||||||.+++.++.. .+.+ ++++|+++|...........
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-~~~~v~~~p~~~~~~~~~~~----- 164 (276)
T 3hxk_A 91 NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHR-PKGVILCYPVTSFTFGWPSD----- 164 (276)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTC-CSEEEEEEECCBTTSSCSSS-----
T ss_pred CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCC-ccEEEEecCcccHHhhCCcc-----
Confidence 256677888888888887753 2345699999999999999999998 6777 99999999876643221100
Q ss_pred HhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCc
Q 020630 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
..+ ..++ .... ... .....+.++.+|+++++|++|.
T Consensus 165 ---------~~~-----~~~~----~~~~---------~~~-----------------~~~~~~~~~~~P~lii~G~~D~ 200 (276)
T 3hxk_A 165 ---------LSH-----FNFE----IENI---------SEY-----------------NISEKVTSSTPPTFIWHTADDE 200 (276)
T ss_dssp ---------SSS-----SCCC----CSCC---------GGG-----------------BTTTTCCTTSCCEEEEEETTCS
T ss_pred ---------hhh-----hhcC----chhh---------hhC-----------------ChhhccccCCCCEEEEecCCCc
Confidence 000 0000 0000 000 0123456778999999999999
Q ss_pred ccCchhHHHHHHHhcC--CCCcEEEecCCCccccccCC---------chhHHHHHHHHHHHHHHHHhhc
Q 020630 261 VTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEP---------DENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~---------~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
++|.+.++.+.+.+.. .++++++++++||.+....+ .+..+.+.+.+.+||+++.+..
T Consensus 201 ~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 201 GVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp SSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred eeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 9999999999988842 34689999999998887666 4567889999999999987654
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-28 Score=192.75 Aligned_cols=245 Identities=9% Similarity=0.027 Sum_probs=145.1
Q ss_pred CcEEEEEecCCCCCCceEEEEecCCCCCcc-h-hhHHHHHHHhcCCcEEEEe----ccccCcCCCCCCCCCCChHHHHhh
Q 020630 40 GKLFTQSFLPLDQKVKATVYMTHGYGSDTG-W-MFQKICISYATWGYAVFAA----DLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 40 g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~-~~~~~~~~l~~~g~~vi~~----d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
..++|..+++.+ +.+|+|||+||++++.. | .|..+++.| +.||+|+++ |+||||.|+ ....++|
T Consensus 24 ~~~~y~~~g~~~-~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~--------~~~~~~d 93 (335)
T 2q0x_A 24 PYCKIPVFMMNM-DARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQD--------HAHDAED 93 (335)
T ss_dssp TTEEEEEEEECT-TSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCC--------HHHHHHH
T ss_pred CceeEEEeccCC-CCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcc--------ccCcHHH
Confidence 478888888422 34689999999987533 2 367888888 568999999 569999984 4556778
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh--hcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF--QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~--~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+.++++.+....+ ..+++|+||||||.+|+.+|. .+|++ |+++|+++|.......................+...
T Consensus 94 ~~~~~~~l~~~l~--~~~~~LvGhSmGG~iAl~~A~~~~~p~r-V~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (335)
T 2q0x_A 94 VDDLIGILLRDHC--MNEVALFATSTGTQLVFELLENSAHKSS-ITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAE 170 (335)
T ss_dssp HHHHHHHHHHHSC--CCCEEEEEEGGGHHHHHHHHHHCTTGGG-EEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC--CCcEEEEEECHhHHHHHHHHHhccchhc-eeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhc
Confidence 8888887765322 458999999999999999999 47888 999999988654321111110000000000000000
Q ss_pred cccCCCcccccccccChh-hHHHhhcCCcccCCCCCchhHHHHH-HhhHHHHhcCCcccccEEEEeeCCCcccCchh---
Q 020630 192 WAAMPDNKMVGKAIKDPE-KLKVIASNPRRYTGKPRVGTMREIA-RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS--- 266 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--- 266 (323)
........ ......... ......... .......+.... ....+..+.+.++++|+|+|+|++|.++|++.
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~ 245 (335)
T 2q0x_A 171 GRGEDSLA-MLKHYDIPITPARLAGGGF----PTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVG 245 (335)
T ss_dssp TCTTCGGG-GTTTCSSCCCHHHHHTCSC----SSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHH
T ss_pred cCcccccc-chhhccCccCHHHHhhccC----CCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHH
Confidence 00000000 000000000 000000000 000000010011 01223456788999999999999999999863
Q ss_pred --HHHHHHHhcCCCCc--------E-----EEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 267 --SKLLYEKASSADKS--------I-----KIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 267 --~~~~~~~~~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.+.+.+ ++.+ + ++++++|| ++.+.|.+||++...
T Consensus 246 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~i~~agH------------e~~~~i~~FL~~~~~ 296 (335)
T 2q0x_A 246 TVLEGVRDHT--GCNRVTVSYFNDTCDELRRVLKAAES------------EHVAAILQFLADEDE 296 (335)
T ss_dssp HHHHHHHHHS--SSSCEEEEECCCEECTTSCEEECCHH------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc--CccccccccccchhhhhhcccCCCCC------------HHHHHHHHHHHhhhh
Confidence 45566666 5666 6 89999999 147888889876543
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=191.15 Aligned_cols=176 Identities=17% Similarity=0.191 Sum_probs=142.4
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHh----hCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRH----SEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~----~~~~~ 128 (323)
+++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.+. .....|+..+++++.. ....+
T Consensus 52 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~ 121 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQP---------DSRGRQLLSALDYLTQRSSVRTRVD 121 (262)
T ss_dssp CCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCH---------HHHHHHHHHHHHHHHHTSTTGGGEE
T ss_pred CCCCEEEEeCCcCCCch-hHHHHHHHHHhCCCEEEEeCCCCCCCCC---------chhHHHHHHHHHHHHhccccccccC
Confidence 45799999999998877 7888999999999999999999998653 2344566666666654 11122
Q ss_pred CCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccCh
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
..+++++||||||.+++.++.++|+ |+++|+++|...
T Consensus 122 ~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~p~~~----------------------------------------- 158 (262)
T 1jfr_A 122 ATRLGVMGHSMGGGGSLEAAKSRTS--LKAAIPLTGWNT----------------------------------------- 158 (262)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCS-----------------------------------------
T ss_pred cccEEEEEEChhHHHHHHHHhcCcc--ceEEEeecccCc-----------------------------------------
Confidence 4589999999999999999999987 999999987531
Q ss_pred hhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh-HHHHHHHhcC-CCCcEEEecC
Q 020630 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASS-ADKSIKIYDG 286 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 286 (323)
...+.++++|+++++|++|.+++.+. ++.+.+.+.. .+++++++++
T Consensus 159 --------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 206 (262)
T 1jfr_A 159 --------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRG 206 (262)
T ss_dssp --------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred --------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCC
Confidence 12345678999999999999999998 9999999843 3568999999
Q ss_pred CCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 287 MYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+||..+.+++ +++.+.+.+||+++++.
T Consensus 207 ~~H~~~~~~~----~~~~~~i~~fl~~~l~~ 233 (262)
T 1jfr_A 207 ASHFTPNTSD----TTIAKYSISWLKRFIDS 233 (262)
T ss_dssp CCTTGGGSCC----HHHHHHHHHHHHHHHSC
T ss_pred CCcCCcccch----HHHHHHHHHHHHHHhcC
Confidence 9999997665 56889999999988753
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=187.20 Aligned_cols=214 Identities=18% Similarity=0.172 Sum_probs=153.5
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC--------
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG-------- 105 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~-------- 105 (323)
....+| ++. .+.|.+ ++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|........
T Consensus 7 ~~~~~g~~~~--~~~~~~--~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (238)
T 1ufo_A 7 RLTLAGLSVL--ARIPEA--PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81 (238)
T ss_dssp EEEETTEEEE--EEEESS--CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHH
T ss_pred ccccCCEEEE--EEecCC--CccEEEEECCCcccch-HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhH
Confidence 344556 543 344443 5899999999998876 78888999999999999999999999976543322
Q ss_pred --ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 106 --DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 106 --~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
+++..++|+.++++++.... ..+++++|||+||.+++.++..+|+. +.+++++++..........
T Consensus 82 ~~~~~~~~~d~~~~~~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~--------- 148 (238)
T 1ufo_A 82 YRVALGFKEEARRVAEEAERRF---GLPLFLAGGSLGAFVAHLLLAEGFRP-RGVLAFIGSGFPMKLPQGQ--------- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEETHHHHHHHHHHHTTCCC-SCEEEESCCSSCCCCCTTC---------
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCcEEEEEEChHHHHHHHHHHhccCc-ceEEEEecCCccchhhhhh---------
Confidence 36778899999999986543 25899999999999999999999987 8999988875432111000
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc-cccEEEEeeCCCccc
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~ 262 (323)
+ ...+. ....... +....+.++ ++|+++++|++|.++
T Consensus 149 --------~------------~~~~~---------------------~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~ 186 (238)
T 1ufo_A 149 --------V------------VEDPG---------------------VLALYQA-PPATRGEAYGGVPLLHLHGSRDHIV 186 (238)
T ss_dssp --------C------------CCCHH---------------------HHHHHHS-CGGGCGGGGTTCCEEEEEETTCTTT
T ss_pred --------c------------cCCcc---------------------cchhhcC-ChhhhhhhccCCcEEEEECCCCCcc
Confidence 0 00000 0000000 023445677 899999999999999
Q ss_pred CchhHHHHHHHhc-CC---CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 263 CPTSSKLLYEKAS-SA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~-~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+.++.+.+.++ .. ++++++++++||... .+ ..+.+.+||.+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~----~~----~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 187 PLARMEKTLEALRPHYPEGRLARFVEEGAGHTLT----PL----MARVGLAFLEHWLE 236 (238)
T ss_dssp THHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCC----HH----HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccH----HH----HHHHHHHHHHHHHh
Confidence 9999999999884 22 789999999999988 33 34455666666554
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=195.42 Aligned_cols=242 Identities=17% Similarity=0.186 Sum_probs=165.5
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCC-cchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC----
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC---- 102 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---- 102 (323)
..+...+.+.+| ++.++.+.|.+.++.|+||++||++++ .. .|.... .|+++||.|+++|+||+|.|.....
T Consensus 55 ~~~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~-~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~~~~~ 132 (318)
T 1l7a_A 55 KVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG-EIHEMV-NWALHGYATFGMLVRGQQRSEDTSISPHG 132 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG-GHHHHH-HHHHTTCEEEEECCTTTSSSCCCCCCSSC
T ss_pred EEEEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCC-Cccccc-chhhCCcEEEEecCCCCCCCCCcccccCC
Confidence 345667778889 999999988765567999999999988 66 666555 6777899999999999999975521
Q ss_pred -------------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 103 -------------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 103 -------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
..+.+...++|+.++++++.....++..+++++|||+||.+++.+|..+|+ ++++|+++|.....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~--~~~~v~~~p~~~~~ 210 (318)
T 1l7a_A 133 HALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI--PKAAVADYPYLSNF 210 (318)
T ss_dssp CSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC--CSEEEEESCCSCCH
T ss_pred ccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC--ccEEEecCCcccCH
Confidence 111246788999999999987644445689999999999999999999887 88888887754210
Q ss_pred CCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcc
Q 020630 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKV 247 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 247 (323)
. ....... .. .. ........... ............. +....+.++
T Consensus 211 ----~-----~~~~~~~----~~---~~----------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 257 (318)
T 1l7a_A 211 ----E-----RAIDVAL----EQ---PY----------LEINSFFRRNG-------SPETEVQAMKTLSYFDIMNLADRV 257 (318)
T ss_dssp ----H-----HHHHHCC----ST---TT----------THHHHHHHHSC-------CHHHHHHHHHHHHTTCHHHHGGGC
T ss_pred ----H-----HHHhcCC----cC---cc----------HHHHHHHhccC-------CcccHHHHHHhhccccHHHHHhhC
Confidence 0 0000000 00 00 00000000000 0000000000000 022345677
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|+++++|++|.++|++.+..+.+.+.. .+++++++++||... .+..+.+.+||.++++
T Consensus 258 ~~P~li~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~~~~~H~~~--------~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 258 KVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEYI--------PAFQTEKLAFFKQILK 317 (318)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSCC--------HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeccCCCCCCcccHHHHHhhcCC-CeeEEEccCCCCCCc--------chhHHHHHHHHHHHhC
Confidence 89999999999999999999999999853 389999999999943 3467888899988763
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=195.25 Aligned_cols=227 Identities=16% Similarity=0.154 Sum_probs=149.7
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.++|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|..... .++++++++++.++++.+. ..++
T Consensus 18 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~l~~~~------~~~~ 88 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-FFFPLAKALAPA-VEVLAVQYPGRQDRRHEPP-VDSIGGLTNRLLEVLRPFG------DRPL 88 (267)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHHTTT-EEEEEECCTTSGGGTTSCC-CCSHHHHHHHHHHHTGGGT------TSCE
T ss_pred CCCceEEEeCCCCCCch-hHHHHHHHhccC-cEEEEecCCCCCCCCCCCC-CcCHHHHHHHHHHHHHhcC------CCce
Confidence 56899999999998876 899999999875 9999999999999986544 3489999999999999884 3489
Q ss_pred EEEEechhHHHHHHHHhhcCCCC---eeEEEEccCccCCCCCCchh--HHHHHHhhcccccccccccCCCcccccccccC
Q 020630 133 FLFGESMGGAATMLMYFQSEPNT---WTGLIFSAPLFVIPENMKPS--KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~---v~~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+|+||||||.+|+.+|.++|++. +++++++++........... .........+..+.. .......+
T Consensus 89 ~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 159 (267)
T 3fla_A 89 ALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGG---------SDAAMLAD 159 (267)
T ss_dssp EEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCH---------HHHHHHHS
T ss_pred EEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcC---------cchhhccC
Confidence 99999999999999999999742 89999988764322211000 000000000000000 00000000
Q ss_pred hhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH-hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCC-CcEEEec
Q 020630 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ-DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD-KSIKIYD 285 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~ 285 (323)
........ ............+. .....+++|+++++|++|.+++.+..+.+.+.+ ++ +++++++
T Consensus 160 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~ 225 (267)
T 3fla_A 160 PELLAMVL------------PAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHT--TGPADLRVLP 225 (267)
T ss_dssp HHHHHHHH------------HHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGB--SSCEEEEEES
T ss_pred HHHHHHHH------------HHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhc--CCCceEEEec
Confidence 00000000 00000001111000 112578999999999999999999888888887 44 8999999
Q ss_pred CCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 286 GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ ||+.+++ ..+++.+.|.+||++...
T Consensus 226 g-gH~~~~~----~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 226 G-GHFFLVD----QAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp S-STTHHHH----THHHHHHHHHHHTC----
T ss_pred C-Cceeecc----CHHHHHHHHHHHhccccc
Confidence 8 9999954 457799999999987653
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=202.29 Aligned_cols=262 Identities=14% Similarity=0.122 Sum_probs=161.4
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH-HHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
..+.+...++. +| +|..+.+.+.+ ++.|+||++||++++.. .|.. +...+.++||+|+++|+||+|.|......
T Consensus 132 ~~~~~~~~i~~-~~~~l~~~~~~~~~-~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~- 207 (405)
T 3fnb_A 132 KIPLKSIEVPF-EGELLPGYAIISED-KAQDTLIVVGGGDTSRE-DLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLH- 207 (405)
T ss_dssp SCCCEEEEEEE-TTEEEEEEEECCSS-SCCCEEEEECCSSCCHH-HHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCC-
T ss_pred CCCcEEEEEeE-CCeEEEEEEEcCCC-CCCCEEEEECCCCCCHH-HHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCC-
Confidence 34456666776 45 88877775432 44599999999988876 5544 34356678999999999999999643222
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
...+..+|+.++++++.... .+++|+|||+||.+++.+|..+| + |+++|+++|....... .......
T Consensus 208 -~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~-v~~~v~~~p~~~~~~~------~~~~~~~ 274 (405)
T 3fnb_A 208 -FEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-R-IKAWIASTPIYDVAEV------FRISFST 274 (405)
T ss_dssp -CCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-T-CCEEEEESCCSCHHHH------HHHHCC-
T ss_pred -CCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-C-eEEEEEecCcCCHHHH------HHHhhhh
Confidence 22255788999999998642 48999999999999999999998 5 9999999987753110 0000000
Q ss_pred ccccccccccCCCccccccc-ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHh--cCCcccccEEEEeeCCCcc
Q 020630 185 LFGLADTWAAMPDNKMVGKA-IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD--NFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~i~g~~D~~ 261 (323)
.... +... ........ ................+.... ............. .+.++++|+|+++|++|.+
T Consensus 275 ~~~~-p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 346 (405)
T 3fnb_A 275 ALKA-PKTI---LKWGSKLVTSVNKVAEVNLNKYAWQFGQVD----FITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDS 346 (405)
T ss_dssp ---------------------CCCHHHHHHHHHHHHHHTSSS----HHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCH
T ss_pred hhhC-cHHH---HHHHHHHhhccchhHHHHHHHhhhhcCCCC----HHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcC
Confidence 0000 0000 00000000 000000000000000000000 1111111111111 2678899999999999999
Q ss_pred cCchhHHHHHHHhc--CCCCcEEEec---CCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 262 TCPTSSKLLYEKAS--SADKSIKIYD---GMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 262 ~~~~~~~~~~~~~~--~~~~~~~~~~---~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++++.+..+.+.++ ++++++++++ ++||... .+..+.+.+.|.+||+++++.
T Consensus 347 v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~----~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 347 ELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQ----VNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGG----GGGHHHHHHHHHHHHHHHHC-
T ss_pred CChHHHHHHHHHhccCCCCceEEEEcCCccchhccc----cchHHHHHHHHHHHHHHHhCc
Confidence 99999999999884 3456799994 4555555 455688999999999998753
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=201.54 Aligned_cols=258 Identities=15% Similarity=0.113 Sum_probs=156.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhH----------------HHHHHHhcCCcEEEEeccccCcCCCCCCCC-
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ----------------KICISYATWGYAVFAADLLGHGRSDGIRCY- 103 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~----------------~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~- 103 (323)
.+.+..+... .+|+||++||++++.. .|. .+++.|+++||+|+++|+||||.|......
T Consensus 39 ~~~~~~~~~~---~~~~vv~~hG~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 114 (354)
T 2rau_A 39 SLHKVNLIGG---GNDAVLILPGTWSSGE-QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQ 114 (354)
T ss_dssp EEEEEEETTC---CEEEEEEECCTTCCHH-HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGG
T ss_pred EEEeecccCC---CCCEEEEECCCCCCcc-ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccc
Confidence 5555555443 3789999999998865 444 788999999999999999999999865431
Q ss_pred -----CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCCchh--
Q 020630 104 -----LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPS-- 175 (323)
Q Consensus 104 -----~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~~~~-- 175 (323)
.++++++++|+.++++++....+ ..+++++||||||.+++.+|.++ |++ |+++|++++...........
T Consensus 115 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~ 191 (354)
T 2rau_A 115 LSFTANWGWSTWISDIKEVVSFIKRDSG--QERIYLAGESFGGIAALNYSSLYWKND-IKGLILLDGGPTKHGIRPKFYT 191 (354)
T ss_dssp GGGGTTCSHHHHHHHHHHHHHHHHHHHC--CSSEEEEEETHHHHHHHHHHHHHHHHH-EEEEEEESCSCBCTTCC--CCC
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHhcC--CceEEEEEECHhHHHHHHHHHhcCccc-cceEEEecccccccCcccchhh
Confidence 35789999999999999865432 45899999999999999999999 988 99999997654321110000
Q ss_pred ---HHHHHHhhcc-cccccccccCCCc----cccccc----------ccChhhHHHh---hcCCcccCCCCCchhHHHHH
Q 020630 176 ---KLHLFMYGLL-FGLADTWAAMPDN----KMVGKA----------IKDPEKLKVI---ASNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 176 ---~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 234 (323)
.....+.... ... +........ ...... ..+....... ..++..+. ...........
T Consensus 192 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 269 (354)
T 2rau_A 192 PEVNSIEEMEAKGIYVI-PSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYP-YSKKEDMFPIL 269 (354)
T ss_dssp CSCSSHHHHHHHTCCEE-ECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTT-CCCHHHHHHHH
T ss_pred hhhhhHHHhhhhccccc-CCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCC-CccHHHHHHHH
Confidence 0000010000 000 000000000 000000 0000000011 01110000 00111111111
Q ss_pred Hh-----------hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHH
Q 020630 235 RV-----------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLV 303 (323)
Q Consensus 235 ~~-----------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 303 (323)
.. ..+....+.++++|+|+++|++|.++|.. ++ .+. +++++++++++||..+++++ +..+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~~----~l~-~~~~~~~~~~~gH~~~~~~~-~~~~~~ 342 (354)
T 2rau_A 270 ASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIFD-SK----ILP-SNSEIILLKGYGHLDVYTGE-NSEKDV 342 (354)
T ss_dssp HTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHBC-GG----GSC-TTCEEEEETTCCGGGGTSST-THHHHT
T ss_pred hhhccccccccccCcccccccccCCCCEEEEecCCCCCCccc-hh----hhc-cCceEEEcCCCCCchhhcCC-CcHHHH
Confidence 10 01123456789999999999999987643 22 222 67899999999999987665 456789
Q ss_pred HHHHHHHHHHH
Q 020630 304 LKDMREWIDER 314 (323)
Q Consensus 304 ~~~i~~fl~~~ 314 (323)
.+.|.+||++.
T Consensus 343 ~~~i~~fl~~~ 353 (354)
T 2rau_A 343 NSVVLKWLSQQ 353 (354)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999864
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=199.98 Aligned_cols=235 Identities=14% Similarity=0.099 Sum_probs=145.5
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
+.+++|||+||++++.. .|..+++.|+++ ||+|+++|+||||.|..+.. .+++++++++.++++.+ . .
T Consensus 34 ~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~l~~~~~~~-~------~ 103 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAVVPIMAKA-P------Q 103 (302)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHHHHHHHHC-T------T
T ss_pred CCCCeEEEECCCCCChh-HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH--HHHHHHHHHHHHHhhcC-C------C
Confidence 44789999999999877 899999999988 89999999999999875432 25677777777777665 2 2
Q ss_pred CEEEEEechhHHHHHHHHhhcCC-CCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCC-Cc-ccccccccC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMP-DN-KMVGKAIKD 207 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 207 (323)
+++++||||||.+++.+|.++|+ + |+++|++++......... ..........+........... .. ........+
T Consensus 104 ~~~lvGhS~Gg~ia~~~a~~~p~~~-v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (302)
T 1pja_A 104 GVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDT-DYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHD 181 (302)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCC-EEEEEEESCCTTCBCSCC-HHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCC
T ss_pred cEEEEEECHHHHHHHHHHHhcCccc-cCEEEEECCCcccccccc-hhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccC
Confidence 89999999999999999999998 6 999999998764332211 1111011010000000000000 00 000000001
Q ss_pred hh-hHHHhhcCC-c-ccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc---------
Q 020630 208 PE-KLKVIASNP-R-RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--------- 275 (323)
Q Consensus 208 ~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--------- 275 (323)
+. ......... . ........ ....++.+.+.+++ |+++++|++|.++|++.++.+.+..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 1pja_A 182 PHHDDLYLNASSFLALINGERDH-------PNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEE 253 (302)
T ss_dssp TTCHHHHHHHCSSHHHHTTSSCC-------TTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGG
T ss_pred hhhhhhhhccchHHHHhhcCCcc-------ccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhh
Confidence 00 000000000 0 00000000 00011345677889 99999999999999888776644331
Q ss_pred ----------------CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 276 ----------------SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 276 ----------------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
..++++++++++||+.+.++| +.+.+.|.+||
T Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 301 (302)
T 1pja_A 254 QLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNR----TLYETCIEPWL 301 (302)
T ss_dssp SHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCH----HHHHHHTGGGC
T ss_pred hhhhhhhhhchhhHhhcCCeEEEEecCccccccccCH----HHHHHHHHHhc
Confidence 122899999999999996555 66888888775
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=186.81 Aligned_cols=192 Identities=18% Similarity=0.257 Sum_probs=147.0
Q ss_pred ecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEe-------------------ccccCcCCCCCCCCCCCh
Q 020630 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAA-------------------DLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 47 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~-------------------d~~G~G~s~~~~~~~~~~ 107 (323)
+.|.+.+++|+||++||++++.. .|..+++.|+++||.|+++ |++|+ .+. ......++
T Consensus 15 ~~p~~~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~-~~~~~~~~ 91 (232)
T 1fj2_A 15 IVPAARKATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPD-SQEDESGI 91 (232)
T ss_dssp EECCSSCCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STT-CCBCHHHH
T ss_pred ccCCCCCCCceEEEEecCCCccc-hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Ccc-cccccHHH
Confidence 34444466899999999998876 7888999998889999998 66666 222 22223368
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
++.++++.++++.+.. ..++..+++++|||+||.+++.++.++|++ ++++|++++........
T Consensus 92 ~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~i~~~~~~~~~~~~--------------- 154 (232)
T 1fj2_A 92 KQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQK-LAGVTALSCWLPLRASF--------------- 154 (232)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSC-CSEEEEESCCCTTGGGS---------------
T ss_pred HHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCc-eeEEEEeecCCCCCccc---------------
Confidence 8889999999999855 333346999999999999999999999988 99999999865421100
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
.. ....+..+++|+++++|++|.+++.+.+
T Consensus 155 -----~~---------------------------------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 184 (232)
T 1fj2_A 155 -----PQ---------------------------------------------GPIGGANRDISILQCHGDCDPLVPLMFG 184 (232)
T ss_dssp -----CS---------------------------------------------SCCCSTTTTCCEEEEEETTCSSSCHHHH
T ss_pred -----cc---------------------------------------------cccccccCCCCEEEEecCCCccCCHHHH
Confidence 00 0123456789999999999999999998
Q ss_pred HHHHHHhcC----CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 268 KLLYEKASS----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 268 ~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+.+.+.. +++++++++++||... .+ ..+.+.+||+++++
T Consensus 185 ~~~~~~l~~~~~~~~~~~~~~~~~~H~~~----~~----~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 185 SLTVEKLKTLVNPANVTFKTYEGMMHSSC----QQ----EMMDVKQFIDKLLP 229 (232)
T ss_dssp HHHHHHHHHHSCGGGEEEEEETTCCSSCC----HH----HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCceEEEEeCCCCcccC----HH----HHHHHHHHHHHhcC
Confidence 888887732 4589999999999996 22 34788899988764
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=191.10 Aligned_cols=203 Identities=13% Similarity=0.052 Sum_probs=152.6
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~ 106 (323)
+...++..+| .+.+..|.|.+ +++|+|||+||.+ ++.. .|..+++.|+++||+|+++|+||+|.. +
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~-~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~~~~~--------~ 108 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG-TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPEV--------R 108 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS-SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTTS--------C
T ss_pred CccccccCCCCCceEEEEccCC-CCCCEEEEEcCcccccCChH-HHHHHHHHHHhCCCEEEEeCCCCCCCC--------C
Confidence 3455666677 88888998876 6789999999954 4444 778888999999999999999998742 6
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc------CCCCeeEEEEccCccCCCCCCchhHHHHH
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~il~~~~~~~~~~~~~~~~~~~ 180 (323)
+.+.++|+.++++++..+.. .+++|+||||||.+++.++..+ +++ |+++|+++|..........
T Consensus 109 ~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~-v~~~vl~~~~~~~~~~~~~------ 178 (262)
T 2pbl_A 109 ISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGAR-IRNVVPISPLSDLRPLLRT------ 178 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTT-EEEEEEESCCCCCGGGGGS------
T ss_pred hHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhcccccccccccc-ceEEEEecCccCchHHHhh------
Confidence 88999999999999987632 4899999999999999999987 777 9999999987653211000
Q ss_pred HhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCc
Q 020630 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
. ........ .... ... .....+.++++|+++++|++|.
T Consensus 179 -------~------------~~~~~~~~-~~~~--------------------~~~--~~~~~~~~~~~P~lii~G~~D~ 216 (262)
T 2pbl_A 179 -------S------------MNEKFKMD-ADAA--------------------IAE--SPVEMQNRYDAKVTVWVGGAER 216 (262)
T ss_dssp -------T------------THHHHCCC-HHHH--------------------HHT--CGGGCCCCCSCEEEEEEETTSC
T ss_pred -------h------------hhhhhCCC-HHHH--------------------Hhc--CcccccCCCCCCEEEEEeCCCC
Confidence 0 00000000 0000 000 0123456788999999999999
Q ss_pred ccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCch
Q 020630 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
+++.+.++.+.+.+ + +++++++++||+.+++++.+
T Consensus 217 ~~~~~~~~~~~~~~--~-~~~~~~~~~~H~~~~~~~~~ 251 (262)
T 2pbl_A 217 PAFLDQAIWLVEAW--D-ADHVIAFEKHHFNVIEPLAD 251 (262)
T ss_dssp HHHHHHHHHHHHHH--T-CEEEEETTCCTTTTTGGGGC
T ss_pred cccHHHHHHHHHHh--C-CeEEEeCCCCcchHHhhcCC
Confidence 99999999999998 4 89999999999999876654
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-28 Score=192.11 Aligned_cols=190 Identities=19% Similarity=0.224 Sum_probs=150.0
Q ss_pred CCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHH
Q 020630 38 PNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 38 ~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
.+|...+..+.|....+.|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|. ....+|+.++
T Consensus 79 ~~g~~~~~~~~p~~~~~~p~vv~~HG~~~~~~-~~~~~~~~la~~G~~vv~~d~~g~g~s~---------~~~~~d~~~~ 148 (306)
T 3vis_A 79 ADGFGGGTIYYPRENNTYGAIAISPGYTGTQS-SIAWLGERIASHGFVVIAIDTNTTLDQP---------DSRARQLNAA 148 (306)
T ss_dssp CSSSCCEEEEEESSCSCEEEEEEECCTTCCHH-HHHHHHHHHHTTTEEEEEECCSSTTCCH---------HHHHHHHHHH
T ss_pred cCCCcceEEEeeCCCCCCCEEEEeCCCcCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCc---------chHHHHHHHH
Confidence 45522234444544346889999999998877 8899999999999999999999999874 2334667777
Q ss_pred HHHHHhh------CCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 118 FKHVRHS------EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 118 i~~l~~~------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
++++... ...+..+++++|||+||.+++.++..+|+ ++++|+++|...
T Consensus 149 ~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~--v~~~v~~~~~~~------------------------ 202 (306)
T 3vis_A 149 LDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD--LKAAIPLTPWHL------------------------ 202 (306)
T ss_dssp HHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCS------------------------
T ss_pred HHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC--eeEEEEeccccC------------------------
Confidence 7777664 33345689999999999999999999987 999999987542
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch-hHHHH
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT-SSKLL 270 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~ 270 (323)
...+.++++|+++++|++|.+++.+ ..+.+
T Consensus 203 -------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~ 233 (306)
T 3vis_A 203 -------------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPF 233 (306)
T ss_dssp -------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHH
T ss_pred -------------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHH
Confidence 1234567899999999999999998 68999
Q ss_pred HHHhcCC-CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 271 YEKASSA-DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 271 ~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.+... ++++++++++||..+.+.+ +++.+.+.+||+++++
T Consensus 234 ~~~l~~~~~~~~~~~~g~gH~~~~~~~----~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 234 YNSIPSPTDKAYLELDGASHFAPNITN----KTIGMYSVAWLKRFVD 276 (306)
T ss_dssp HHTCCTTSCEEEEEETTCCTTGGGSCC----HHHHHHHHHHHHHHHS
T ss_pred HHHhccCCCceEEEECCCCccchhhch----hHHHHHHHHHHHHHcc
Confidence 9988532 5679999999999997666 5688889999988764
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=174.95 Aligned_cols=173 Identities=14% Similarity=0.166 Sum_probs=136.3
Q ss_pred CCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
+++|+||++||++++.. |.+..+++.|.++||.|+++|+||+|.|..... ..+..+.++++.+.++.... ..+
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~ 75 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQ-LGDVRGRLQRLLEIARAATE-----KGP 75 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCT-TCCHHHHHHHHHHHHHHHHT-----TSC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhcCC-----CCC
Confidence 45789999999997753 344588999999999999999999999874432 23566666666666665542 348
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++||||||.+++.++.++| ++++|+++|........
T Consensus 76 ~~l~G~S~Gg~~a~~~a~~~~---~~~~v~~~~~~~~~~~~--------------------------------------- 113 (176)
T 2qjw_A 76 VVLAGSSLGSYIAAQVSLQVP---TRALFLMVPPTKMGPLP--------------------------------------- 113 (176)
T ss_dssp EEEEEETHHHHHHHHHHTTSC---CSEEEEESCCSCBTTBC---------------------------------------
T ss_pred EEEEEECHHHHHHHHHHHhcC---hhheEEECCcCCccccC---------------------------------------
Confidence 999999999999999999987 89999999876432100
Q ss_pred HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccc
Q 020630 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
.+..+++|+++++|++|.++|.+.++.+.+.+ +++++++ ++||.+
T Consensus 114 -------------------------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~-~~~H~~ 158 (176)
T 2qjw_A 114 -------------------------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR---SARLLLV-DDGHRL 158 (176)
T ss_dssp -------------------------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEE-SSCTTC
T ss_pred -------------------------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC---CceEEEe-CCCccc
Confidence 04567899999999999999999999998887 5788889 899997
Q ss_pred cccCCchhHHHHHHHHHHHHHH
Q 020630 292 IQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
. +..+++.+.+.+|+++
T Consensus 159 ~-----~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 159 G-----AHVQAASRAFAELLQS 175 (176)
T ss_dssp T-----TCHHHHHHHHHHHHHT
T ss_pred c-----ccHHHHHHHHHHHHHh
Confidence 4 3457788999999864
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=196.24 Aligned_cols=193 Identities=15% Similarity=0.174 Sum_probs=145.9
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhH-------HHHHHHhcCCcEEEEeccccCcCCCCCCCCC---------
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KICISYATWGYAVFAADLLGHGRSDGIRCYL--------- 104 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-------~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~--------- 104 (323)
++++..+.|.+ ..+++|||+||++.+.. .|. .+++.|+++||.|+++|+||||.|.......
T Consensus 49 ~~~~~~~~p~~-~~~~~vvl~HG~g~~~~-~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~ 126 (328)
T 1qlw_A 49 QMYVRYQIPQR-AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAP 126 (328)
T ss_dssp CEEEEEEEETT-CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSC
T ss_pred eEEEEEEccCC-CCCccEEEEeCCCCCCC-ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccC
Confidence 56666666654 34688999999998766 676 4888999999999999999999998653210
Q ss_pred --------------------C---------C-------hHH------------------HHhhHHHHHHHHHhhCCCCCC
Q 020630 105 --------------------G---------D-------MEK------------------VAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 105 --------------------~---------~-------~~~------------------~~~d~~~~i~~l~~~~~~~~~ 130 (323)
+ . +++ +++++.++++.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-------- 198 (328)
T 1qlw_A 127 ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD-------- 198 (328)
T ss_dssp GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--------
T ss_pred cccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--------
Confidence 0 0 333 5566666666552
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhh
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
+++++||||||.+++.+|.++|++ |+++|+++|.....
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~-v~~~v~~~p~~~~~----------------------------------------- 236 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKG-ITAIVSVEPGECPK----------------------------------------- 236 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTT-EEEEEEESCSCCCC-----------------------------------------
T ss_pred CceEEEECcccHHHHHHHHhChhh-eeEEEEeCCCCCCC-----------------------------------------
Confidence 799999999999999999999998 99999999753000
Q ss_pred HHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc-----hhHHHHHHHhc--CCCCcEEE
Q 020630 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP-----TSSKLLYEKAS--SADKSIKI 283 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~--~~~~~~~~ 283 (323)
.......+++|+|+++|++|.++|+ +.++.+.+.+. +.++++++
T Consensus 237 -----------------------------~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~ 287 (328)
T 1qlw_A 237 -----------------------------PEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMS 287 (328)
T ss_dssp -----------------------------GGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -----------------------------HHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEE
Confidence 0011123468999999999999997 88888888873 13689999
Q ss_pred ecCCC-----ccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 284 YDGMY-----HSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 284 ~~~~g-----H~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++++| |+.+.+. ..+++.+.|.+||+++...
T Consensus 288 ~~~~gi~G~~H~~~~~~---~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 288 LPALGVHGNSHMMMQDR---NNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp GGGGTCCCCCTTGGGST---THHHHHHHHHHHHHHTCC-
T ss_pred cCCCCcCCCcccchhcc---CHHHHHHHHHHHHHhcccC
Confidence 99666 9999644 2577999999999987654
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=197.93 Aligned_cols=251 Identities=11% Similarity=-0.016 Sum_probs=157.6
Q ss_pred eEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 33 EYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
..+...+|.+.++.+.|.+.++.|+||++||++++. +...+..|+++||.|+++|+||+|.+...... .. .+
T Consensus 136 ~~~~~~~~~l~~~l~~P~~~~~~P~Vv~~hG~~~~~---~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~-~~----~~ 207 (422)
T 3k2i_A 136 WRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGL---LEYRASLLAGHGFATLALAYYNFEDLPNNMDN-IS----LE 207 (422)
T ss_dssp EEEEEEETTEEEEEEECSSSCCBCEEEEECCTTCSC---CCHHHHHHHTTTCEEEEEECSSSTTSCSSCSC-EE----TH
T ss_pred EEEEEeCCcEEEEEEcCCCCCCcCEEEEEcCCCcch---hHHHHHHHHhCCCEEEEEccCCCCCCCCCccc-CC----HH
Confidence 344455558999999988766789999999998762 23457889999999999999999988654332 12 45
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
|+.++++++.....++..+++|+||||||.+|+.+|.++|+ |+++|++++........... .....+..
T Consensus 208 d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~--v~a~V~~~~~~~~~~~~~~~---------~~~~~~~~ 276 (422)
T 3k2i_A 208 YFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN--VSATVSINGSGISGNTAINY---------KHSSIPPL 276 (422)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS--EEEEEEESCCSBCCSSCEEE---------TTEEECCC
T ss_pred HHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC--ccEEEEEcCcccccCCchhh---------cCCcCCCc
Confidence 66777777766644446799999999999999999999997 99999988776432211000 00000000
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH-HHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS-KLLY 271 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~ 271 (323)
...... . ...... .......+.. .... ........+.++++|+|+++|++|.++|.+.. +.+.
T Consensus 277 ~~~~~~-~---~~~~~~----~~~~~~~~~~-~~~~-------~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~ 340 (422)
T 3k2i_A 277 GYDLRR-I---KVAFSG----LVDIVDIRNA-LVGG-------YKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVS 340 (422)
T ss_dssp CBCGGG-C---EECTTS----CEECTTCBCC-CTTG-------GGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred ccchhh-c---ccCcch----hHHHHHHHhh-hhhc-------ccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 000000 0 000000 0000000000 0000 00001123567899999999999999998754 5666
Q ss_pred HHhc---CCCCcEEEecCCCccccccC------------------------CchhHHHHHHHHHHHHHHHHhhc
Q 020630 272 EKAS---SADKSIKIYDGMYHSLIQGE------------------------PDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 272 ~~~~---~~~~~~~~~~~~gH~~~~~~------------------------~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.+. .+++++++++++||.+.... ..+..+++++.+.+||++++...
T Consensus 341 ~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 341 ERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp HHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 6652 23378999999999983110 12456779999999999998654
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=190.83 Aligned_cols=233 Identities=10% Similarity=0.037 Sum_probs=157.0
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCC------CCCceEEEEecCCC--CCcchhhHHHHHHHhcCCcEEEEeccccCcC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYG--SDTGWMFQKICISYATWGYAVFAADLLGHGR 96 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~ 96 (323)
.....+...+...+| .+.+..| |.. .++.|+||++||.+ +.....|..+++.|+++||.|+++|+||+|.
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~ 93 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTD 93 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTT
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCc
Confidence 344556778888888 8888888 553 35679999999955 2333368889999999999999999999998
Q ss_pred CCCCCCCCCChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhcCCC------------CeeEEEE
Q 020630 97 SDGIRCYLGDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQSEPN------------TWTGLIF 161 (323)
Q Consensus 97 s~~~~~~~~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~------------~v~~~il 161 (323)
+. .+......|+.++++++.... .++..+++|+||||||.+|+.++.++|+. +++++|+
T Consensus 94 ~~------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 167 (283)
T 3bjr_A 94 QQ------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVL 167 (283)
T ss_dssp CS------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEE
T ss_pred cc------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEE
Confidence 73 123344556666666665421 12245899999999999999999998852 2789999
Q ss_pred ccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH
Q 020630 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|............ ..+ ..++. . ... ....
T Consensus 168 ~~p~~~~~~~~~~~~-------------~~~-----~~~~~----~----------~~~-----------------~~~~ 198 (283)
T 3bjr_A 168 GYPVISPLLGFPKDD-------------ATL-----ATWTP----T----------PNE-----------------LAAD 198 (283)
T ss_dssp ESCCCCTTSBC--------------------------CCCC----C----------GGG-----------------GCGG
T ss_pred cCCcccccccccccc-------------chH-----HHHHH----H----------hHh-----------------cCHH
Confidence 988765322110000 000 00000 0 000 0012
Q ss_pred hcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCc---------hhHHHHHHHHHHH
Q 020630 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPD---------ENANLVLKDMREW 310 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~---------~~~~~~~~~i~~f 310 (323)
..+.++.+|+|+++|++|.++|++.++.+.+.+. +.++++++++++||.+..+.+. ...+++.+.+.+|
T Consensus 199 ~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~f 278 (283)
T 3bjr_A 199 QHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEW 278 (283)
T ss_dssp GSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHH
T ss_pred HhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHH
Confidence 3456778999999999999999999999998884 2346899999999987754431 1235688889999
Q ss_pred HHHH
Q 020630 311 IDER 314 (323)
Q Consensus 311 l~~~ 314 (323)
|+++
T Consensus 279 l~~~ 282 (283)
T 3bjr_A 279 LADN 282 (283)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 9753
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=198.57 Aligned_cols=123 Identities=11% Similarity=0.097 Sum_probs=101.8
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhc------CCcEEEEeccccCcCCCCCC-CCC
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYAT------WGYAVFAADLLGHGRSDGIR-CYL 104 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~------~g~~vi~~d~~G~G~s~~~~-~~~ 104 (323)
.+....+| +|+|...++.. ..+++|||+||++++.. .|..+++.|.+ .||+|+++|+||||.|+.+. ...
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~-~~~~pllllHG~~~s~~-~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~ 164 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSER-EDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKD 164 (408)
T ss_dssp EEEEEETTEEEEEEEECCSC-TTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSC
T ss_pred CEEEEECCEEEEEEEecCCC-CCCCeEEEECCCCCcHH-HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCC
Confidence 34455689 99999998754 44789999999998876 89999999987 58999999999999998765 345
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccC
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~ 164 (323)
++++++++++.++++.++.. .+++++||||||.+++.+|.++|+ +.++++..+
T Consensus 165 ~~~~~~a~~~~~l~~~lg~~-----~~~~lvG~S~Gg~ia~~~A~~~p~--~~~~~l~~~ 217 (408)
T 3g02_A 165 FGLMDNARVVDQLMKDLGFG-----SGYIIQGGDIGSFVGRLLGVGFDA--CKAVHLNFC 217 (408)
T ss_dssp CCHHHHHHHHHHHHHHTTCT-----TCEEEEECTHHHHHHHHHHHHCTT--EEEEEESCC
T ss_pred CCHHHHHHHHHHHHHHhCCC-----CCEEEeCCCchHHHHHHHHHhCCC--ceEEEEeCC
Confidence 68999999999999998642 279999999999999999999976 566665543
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=191.92 Aligned_cols=222 Identities=15% Similarity=0.111 Sum_probs=141.1
Q ss_pred eEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEE
Q 020630 56 ATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLF 135 (323)
Q Consensus 56 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~ 135 (323)
++|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|..... .++++++++++.++++.+.. ..+++|+
T Consensus 52 ~~lvllHG~~~~~~-~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~~~~-----~~~~~lv 123 (280)
T 3qmv_A 52 LRLVCFPYAGGTVS-AFRGWQERLGD-EVAVVPVQLPGRGLRLRERP-YDTMEPLAEAVADALEEHRL-----THDYALF 123 (280)
T ss_dssp EEEEEECCTTCCGG-GGTTHHHHHCT-TEEEEECCCTTSGGGTTSCC-CCSHHHHHHHHHHHHHHTTC-----SSSEEEE
T ss_pred ceEEEECCCCCChH-HHHHHHHhcCC-CceEEEEeCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCC-----CCCEEEE
Confidence 89999999998877 89999999987 89999999999999976543 35899999999999998832 3489999
Q ss_pred EechhHHHHHHHHhhcCCCCee----EEEEccCccCCCCCCch--hHHHHHHhhcccccccccccCCCcccccccccChh
Q 020630 136 GESMGGAATMLMYFQSEPNTWT----GLIFSAPLFVIPENMKP--SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~----~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (323)
||||||.+|+.+|.++|++ +. .++++++.......... ......+...+..+... .. ... .
T Consensus 124 G~S~Gg~va~~~a~~~p~~-~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~----~--- 190 (280)
T 3qmv_A 124 GHSMGALLAYEVACVLRRR-GAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGL----DD-ADT----L--- 190 (280)
T ss_dssp EETHHHHHHHHHHHHHHHT-TCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCC----C-------------
T ss_pred EeCHhHHHHHHHHHHHHHc-CCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCC----Ch-hhh----c---
Confidence 9999999999999998876 65 77777654321111000 00000000000000000 00 000 0
Q ss_pred hHHHhhcCCcccCCCCCchhHHHHHHhhHHH-HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCC
Q 020630 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
... .. ................+ ...+..+++|+++++|++|.+++.+..+.+.+.+. ...++++++ +|
T Consensus 191 -------~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-gg 259 (280)
T 3qmv_A 191 -------GAA-YF-DRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT-GSFLRRHLP-GN 259 (280)
T ss_dssp ------------C-CTTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS-SCEEEEEEE-EE
T ss_pred -------CHH-HH-HHHHHHHHHHHHHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcC-CceEEEEec-CC
Confidence 000 00 00001111111111100 11246789999999999999999988888877763 235677777 59
Q ss_pred ccccccCCchhHHHHHHHHHHHH
Q 020630 289 HSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|+.++++ +..+++.+.|.+||
T Consensus 260 H~~~~~~--~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 260 HFFLNGG--PSRDRLLAHLGTEL 280 (280)
T ss_dssp TTGGGSS--HHHHHHHHHHHTTC
T ss_pred CeEEcCc--hhHHHHHHHHHhhC
Confidence 9999511 45677888887764
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=196.01 Aligned_cols=243 Identities=13% Similarity=0.063 Sum_probs=158.8
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
..+.+...++. +| .+.++.+.|.+.++.|+||++||++++....|..+...|+++||+|+++|+||+|.|...... .
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~-~ 242 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT-E 242 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCC-S
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC-C
Confidence 34456667776 55 999999988765678999999999988554677778888889999999999999999864432 2
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+.++.+ +++++.....++..+++++|||+||.+++.+|..+|++ |+++|+++|..... .........+
T Consensus 243 ~~~~~~~~---v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~-v~~~v~~~~~~~~~------~~~~~~~~~~ 312 (415)
T 3mve_A 243 DYSRLHQA---VLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEK-IKACVILGAPIHDI------FASPQKLQQM 312 (415)
T ss_dssp CTTHHHHH---HHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-CCEEEEESCCCSHH------HHCHHHHTTS
T ss_pred CHHHHHHH---HHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcc-eeEEEEECCccccc------cccHHHHHHh
Confidence 45555544 44444443323356899999999999999999999988 99999999874310 0000000000
Q ss_pred cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHH---H-hc--CCcccccEEEEeeCCC
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI---Q-DN--FSKVTVPFLTVHGTAD 259 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~--~~~~~~P~l~i~g~~D 259 (323)
... ........... .. .....+....... . .. ..++++|+|+++|++|
T Consensus 313 ~~~---------------------~~~~~~~~~g~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 366 (415)
T 3mve_A 313 PKM---------------------YLDVLASRLGK----SV-VDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGD 366 (415)
T ss_dssp CHH---------------------HHHHHHHHTTC----SS-BCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTC
T ss_pred HHH---------------------HHHHHHHHhCC----Cc-cCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCC
Confidence 000 00000000000 00 0000000000000 0 01 3578999999999999
Q ss_pred cccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.++|.+.+..+.+.. ++++++++++..+ + ...+++.+.+.+||++++.
T Consensus 367 ~~vp~~~~~~l~~~~--~~~~l~~i~g~~~--h-----~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 367 PVSPYSDNQMVAFFS--TYGKAKKISSKTI--T-----QGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp SSSCHHHHHHHHHTB--TTCEEEEECCCSH--H-----HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhC--CCceEEEecCCCc--c-----cchHHHHHHHHHHHHHHhc
Confidence 999999999888865 7899999998221 1 1346788999999998874
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-27 Score=194.50 Aligned_cols=251 Identities=12% Similarity=-0.028 Sum_probs=156.9
Q ss_pred eEEecCCCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 33 EYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
..+...+|.+.++.|.|.+.++.|+||++||++++.. . ..+..|+++||.|+++|+||+|.+....... . .+
T Consensus 152 ~~~~~~~g~l~~~l~~P~~~~~~P~Vv~lhG~~~~~~-~--~~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~-~----~~ 223 (446)
T 3hlk_A 152 RREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLL-E--YRASLLAGKGFAVMALAYYNYEDLPKTMETL-H----LE 223 (446)
T ss_dssp EEEEEEETTEEEEEEECSSSCCBCEEEEECCSSCSCC-C--HHHHHHHTTTCEEEEECCSSSTTSCSCCSEE-E----HH
T ss_pred EEEEecCCeEEEEEEeCCCCCCCCEEEEECCCCcchh-h--HHHHHHHhCCCEEEEeccCCCCCCCcchhhC-C----HH
Confidence 3444455589999999876667899999999987532 2 3478899999999999999999886543221 2 46
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
|+.++++++.....++..+++|+||||||.+|+.+|..+|+ |+++|++++........... .....+..
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~--v~a~V~~~~~~~~~~~~~~~---------~~~~~~~~ 292 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG--ITAAVVINGSVANVGGTLRY---------KGETLPPV 292 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC--EEEEEEESCCSBCCSSEEEE---------TTEEECCC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC--ceEEEEEcCcccccCCCccc---------cCccCCcc
Confidence 67777777776655556799999999999999999999987 99999998865432211000 00000000
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH-HHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS-KLLY 271 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~ 271 (323)
......... ..... ......+..... . ........+.++++|+|+++|++|.++|.+.. +.+.
T Consensus 293 ~~~~~~~~~----~~~~~----~~~~~~~~~~~~-~-------~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~ 356 (446)
T 3hlk_A 293 GVNRNRIKV----TKDGY----ADIVDVLNSPLE-G-------PDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEAC 356 (446)
T ss_dssp CBCGGGCEE----CSSSC----EECTTCBCCTTS-G-------GGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHH
T ss_pred ccchhcccc----ccchH----HHHHHHHhchhh-c-------cccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHH
Confidence 000000000 00000 000000000000 0 00001123567889999999999999998443 5666
Q ss_pred HHhc---CCCCcEEEecCCCccccccC------------------------CchhHHHHHHHHHHHHHHHHhhc
Q 020630 272 EKAS---SADKSIKIYDGMYHSLIQGE------------------------PDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 272 ~~~~---~~~~~~~~~~~~gH~~~~~~------------------------~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.+. .+++++++++++||.+.... ..+..+.+++.+.+||++++...
T Consensus 357 ~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 357 KRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp HHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 6652 23379999999999983100 12336779999999999998654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=209.05 Aligned_cols=242 Identities=17% Similarity=0.136 Sum_probs=170.1
Q ss_pred ccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEecccc---CcCCCCCCC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLG---HGRSDGIRC 102 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G---~G~s~~~~~ 102 (323)
..+...++..+| ++.+..+.|.+ ..+.|+||++||++.+. ...|..+++.|+++||.|+++|+|| +|.+.....
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~ 411 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKI 411 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTT
T ss_pred cceEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhh
Confidence 346677888899 99999999874 23679999999987652 2367888999999999999999999 666532211
Q ss_pred CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHh
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 182 (323)
.........+|+.++++++..+...+ +++|+||||||.+++.+|.++|++ ++++|+++|...... +.
T Consensus 412 ~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~----------~~ 478 (582)
T 3o4h_A 412 IGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGL-FKAGVAGASVVDWEE----------MY 478 (582)
T ss_dssp TTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTT-SSCEEEESCCCCHHH----------HH
T ss_pred hhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCc-eEEEEEcCCccCHHH----------Hh
Confidence 11123455688888888887764322 899999999999999999999998 999999998654210 00
Q ss_pred hcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCccc
Q 020630 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.... .....+..... . ... ..+.... ....+.++++|+|+++|++|..+
T Consensus 479 ~~~~---------------------~~~~~~~~~~~----~----~~~-~~~~~~s-p~~~~~~i~~P~lii~G~~D~~v 527 (582)
T 3o4h_A 479 ELSD---------------------AAFRNFIEQLT----G----GSR-EIMRSRS-PINHVDRIKEPLALIHPQNASRT 527 (582)
T ss_dssp HTCC---------------------HHHHHHHHHHT----T----TCH-HHHHHTC-GGGGGGGCCSCEEEEEETTCSSS
T ss_pred hccc---------------------chhHHHHHHHc----C----cCH-HHHHhcC-HHHHHhcCCCCEEEEecCCCCCc
Confidence 0000 00000000000 0 000 0000000 12345677899999999999999
Q ss_pred CchhHHHHHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 263 CPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++.++.+++.+.. .++++++++++||.+. ..+..+++.+.+.+||+++++.
T Consensus 528 ~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~---~~~~~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 528 PLKPLLRLMGELLARGKTFEAHIIPDAGHAIN---TMEDAVKILLPAVFFLATQRER 581 (582)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---BHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEEECCCCCCCC---ChHHHHHHHHHHHHHHHHHcCC
Confidence 99999999988842 3479999999999987 2456788999999999998753
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=173.24 Aligned_cols=183 Identities=12% Similarity=0.107 Sum_probs=134.9
Q ss_pred ceEEEEecCCCCCcchhhHHHH-HHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKIC-ISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~-~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
.|+|||+||++++....|.... ..|+++||+|+++|+| .+.. .+++++++++.++++.+ .+ +++
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~-----~~~~~~~~~~~~~~~~~-~~------~~~ 68 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ-----PRLEDWLDTLSLYQHTL-HE------NTY 68 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS-----CCHHHHHHHHHTTGGGC-CT------TEE
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC-----CCHHHHHHHHHHHHHhc-cC------CEE
Confidence 5679999999987642455555 5687889999999999 2222 16888889988888776 32 899
Q ss_pred EEEechhHHHHHHHHhhcCC--CCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 134 LFGESMGGAATMLMYFQSEP--NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~--~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++||||||.+++.+|.++|+ + |+++|+++|.......... ......
T Consensus 69 l~G~S~Gg~~a~~~a~~~~~~~~-v~~~v~~~~~~~~~~~~~~--------------------------~~~~~~----- 116 (192)
T 1uxo_A 69 LVAHSLGCPAILRFLEHLQLRAA-LGGIILVSGFAKSLPTLQM--------------------------LDEFTQ----- 116 (192)
T ss_dssp EEEETTHHHHHHHHHHTCCCSSC-EEEEEEETCCSSCCTTCGG--------------------------GGGGTC-----
T ss_pred EEEeCccHHHHHHHHHHhcccCC-ccEEEEeccCCCccccchh--------------------------hhhhhh-----
Confidence 99999999999999999998 7 9999999987543211100 000000
Q ss_pred HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccc
Q 020630 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
.+ .. ...+.++++|+++++|++|.++|.+.++.+.+.+ ++++++++++||..
T Consensus 117 -----~~--------~~------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~ 168 (192)
T 1uxo_A 117 -----GS--------FD------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFL 168 (192)
T ss_dssp -----SC--------CC------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSC
T ss_pred -----cC--------CC------------HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc---CceEEEeCCCcCcc
Confidence 00 00 1223456789999999999999999999998887 57999999999999
Q ss_pred cccCCchhHHHHHHHHHHHHHH
Q 020630 292 IQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+++++. .++.+.+.+|+++
T Consensus 169 ~~~~~~~~-~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 169 EDEGFTSL-PIVYDVLTSYFSK 189 (192)
T ss_dssp GGGTCSCC-HHHHHHHHHHHHC
T ss_pred cccccccH-HHHHHHHHHHHHH
Confidence 98887654 3356666666653
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=189.68 Aligned_cols=244 Identities=16% Similarity=0.142 Sum_probs=163.4
Q ss_pred CccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCC---CC
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI---RC 102 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~---~~ 102 (323)
+..++..+.+.+| +|.++.+.|.+ .++.|+||++||++++.. .+. ....|+++||.|+++|+||+|.|... ..
T Consensus 66 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~-~~~-~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~ 143 (337)
T 1vlq_A 66 VEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPH-DWLFWPSMGYICFVMDTRGQGSGWLKGDTPD 143 (337)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGG-GGCHHHHTTCEEEEECCTTCCCSSSCCCCCB
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCC-Cch-hhcchhhCCCEEEEecCCCCCCcccCCCCcc
Confidence 3456677888889 99999998875 456799999999997754 332 33466778999999999999976532 11
Q ss_pred ---------------------CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEE
Q 020630 103 ---------------------YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 103 ---------------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il 161 (323)
..+.+...++|+.++++++.....++..+++++|||+||.+++.+|..+|. ++++|+
T Consensus 144 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~--v~~~vl 221 (337)
T 1vlq_A 144 YPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK--AKALLC 221 (337)
T ss_dssp CCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS--CCEEEE
T ss_pred cccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCC--ccEEEE
Confidence 012345788999999999987654445689999999999999999999884 999999
Q ss_pred ccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH
Q 020630 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|..... . ....... .. . . ............ ............ +..
T Consensus 222 ~~p~~~~~-----~----~~~~~~~----~~---~---~-------~~~~~~~~~~~~------~~~~~~~~~~~~-~~~ 268 (337)
T 1vlq_A 222 DVPFLCHF-----R----RAVQLVD----TH---P---Y-------AEITNFLKTHRD------KEEIVFRTLSYF-DGV 268 (337)
T ss_dssp ESCCSCCH-----H----HHHHHCC----CT---T---H-------HHHHHHHHHCTT------CHHHHHHHHHTT-CHH
T ss_pred CCCcccCH-----H----HHHhcCC----Cc---c---h-------HHHHHHHHhCch------hHHHHHHhhhhc-cHH
Confidence 98854311 0 0000000 00 0 0 000001110000 000000000000 012
Q ss_pred hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+.++++|+|+++|++|.++|++.+..+++.+.. ++++.+++++||.... ....+.+.+||.+.++
T Consensus 269 ~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~~~~gH~~~~-------~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 269 NFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGGG-------SFQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTTH-------HHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEcCCCCCCCcc-------hhhHHHHHHHHHHHHh
Confidence 33467789999999999999999999999999853 4889999999999641 3456778888887764
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-27 Score=177.35 Aligned_cols=193 Identities=16% Similarity=0.166 Sum_probs=145.2
Q ss_pred CCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEe--ccccCcCCCCCC---CCCCChHHHH
Q 020630 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAA--DLLGHGRSDGIR---CYLGDMEKVA 111 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~--d~~G~G~s~~~~---~~~~~~~~~~ 111 (323)
.+| +++|+..+.. +++|+||++||++++.. .|..+++.|++ ||.|+++ |++|+|.|.... ...++...+.
T Consensus 22 ~~~~~~~~~~~~~~--~~~~~vv~~HG~~~~~~-~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 97 (226)
T 2h1i_A 22 SNAMMKHVFQKGKD--TSKPVLLLLHGTGGNEL-DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLI 97 (226)
T ss_dssp HHSSSCEEEECCSC--TTSCEEEEECCTTCCTT-TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHH
T ss_pred CCCceeEEecCCCC--CCCcEEEEEecCCCChh-HHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhhHH
Confidence 456 8888776542 35899999999998877 78899999988 8999999 999999875321 1112444444
Q ss_pred ---hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 112 ---ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 112 ---~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
+++.++++.+.....++..+++++|||+||.+++.++..+|++ ++++|+++|......
T Consensus 98 ~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~------------------ 158 (226)
T 2h1i_A 98 FRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENA-LKGAVLHHPMVPRRG------------------ 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCSCSS------------------
T ss_pred HHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhh-hCEEEEeCCCCCcCc------------------
Confidence 4455566555665544467999999999999999999999988 999999998754221
Q ss_pred ccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHH
Q 020630 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
......+++|+++++|++|.+++.+.++
T Consensus 159 ----------------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~ 186 (226)
T 2h1i_A 159 ----------------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESE 186 (226)
T ss_dssp ----------------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHH
T ss_pred ----------------------------------------------------cccccccCCcEEEEeCCCCCcCCHHHHH
Confidence 0011234789999999999999999999
Q ss_pred HHHHHhcCC--CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 269 LLYEKASSA--DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 269 ~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+.+... ++++ +++++||... . +..+.+.+||.+.
T Consensus 187 ~~~~~l~~~~~~~~~-~~~~~gH~~~----~----~~~~~~~~~l~~~ 225 (226)
T 2h1i_A 187 ELKVLLENANANVTM-HWENRGHQLT----M----GEVEKAKEWYDKA 225 (226)
T ss_dssp HHHHHHHTTTCEEEE-EEESSTTSCC----H----HHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEE-EeCCCCCCCC----H----HHHHHHHHHHHHh
Confidence 999888533 3445 9999999996 3 3557778888764
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-27 Score=174.45 Aligned_cols=190 Identities=12% Similarity=0.059 Sum_probs=140.9
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEec-------------cccCcCCCCCCCCCCCh
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAAD-------------LLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d-------------~~G~G~s~~~~~~~~~~ 107 (323)
.+.|....+. +.+.| ||++||++++.. .|..+++.|. .++.|+++| ++|+|.+.........+
T Consensus 4 ~~~~~~~~~~-~~~~p-vv~lHG~g~~~~-~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 4 MTDYVFKAGR-KDLAP-LLLLHSTGGDEH-QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp CCCEEEECCC-TTSCC-EEEECCTTCCTT-TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred cceEEEeCCC-CCCCC-EEEEeCCCCCHH-HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 4445444433 24567 999999998877 7889999998 579999999 67777654332222245
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...++++.++++.+....+++..+++++||||||.+++.+|.++|++ ++++|++++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~~---------------- 142 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKIN-FDKIIAFHGMQLEDFE---------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCC-CSEEEEESCCCCCCCC----------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcc-cceEEEECCCCCCccc----------------
Confidence 56667777788777665554457999999999999999999999998 9999999876431100
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
.......+|+++++|++|.++|.+.+
T Consensus 143 ------------------------------------------------------~~~~~~~~p~li~~G~~D~~v~~~~~ 168 (209)
T 3og9_A 143 ------------------------------------------------------QTVQLDDKHVFLSYAPNDMIVPQKNF 168 (209)
T ss_dssp ------------------------------------------------------CCCCCTTCEEEEEECTTCSSSCHHHH
T ss_pred ------------------------------------------------------ccccccCCCEEEEcCCCCCccCHHHH
Confidence 00123478999999999999999999
Q ss_pred HHHHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 268 KLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+.+.. ..+++.+++ +||.+. .+..+.+.+||++.
T Consensus 169 ~~~~~~l~~~~~~~~~~~~~-~gH~~~--------~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 169 GDLKGDLEDSGCQLEIYESS-LGHQLT--------QEEVLAAKKWLTET 208 (209)
T ss_dssp HHHHHHHHHTTCEEEEEECS-STTSCC--------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEcC-CCCcCC--------HHHHHHHHHHHHhh
Confidence 988888742 246777787 799886 23567788898764
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=184.29 Aligned_cols=250 Identities=13% Similarity=0.074 Sum_probs=153.3
Q ss_pred ccceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCC
Q 020630 29 RNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
..++..+...+|.+.++.|.|.+..+.|+||++||++ ++.. .|..+++.|+++ ||.|+++|+||+|++..+
T Consensus 47 ~~~~~~i~~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~---- 121 (311)
T 2c7b_A 47 ETRDVHIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIE-THDHICRRLSRLSDSVVVSVDYRLAPEYKFP---- 121 (311)
T ss_dssp EEEEEEEEETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTCEEEEECCCCTTTSCTT----
T ss_pred eEEEEEecCCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChh-hhHHHHHHHHHhcCCEEEEecCCCCCCCCCC----
Confidence 4456667777778888999887645579999999988 6665 788899999876 999999999999987532
Q ss_pred CChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhHHH
Q 020630 105 GDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
...+|+.++++++.... +++..+++|+|||+||.+|+.++..++++ .++++|+++|............
T Consensus 122 ----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-- 195 (311)
T 2c7b_A 122 ----TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASL-- 195 (311)
T ss_dssp ----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHH--
T ss_pred ----ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCC--
Confidence 23345555554443321 11235899999999999999999876641 2999999999876432111111
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCC
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
........ .. +...... .....+......... ... ......+..+. |+++++|++
T Consensus 196 ~~~~~~~~----~~--------~~~~~~~-~~~~~~~~~~~~~~~-~~~----------~p~~~~l~~~~-P~lii~G~~ 250 (311)
T 2c7b_A 196 VEFGVAET----TS--------LPIELMV-WFGRQYLKRPEEAYD-FKA----------SPLLADLGGLP-PALVVTAEY 250 (311)
T ss_dssp HHHHHCTT----CS--------SCHHHHH-HHHHHHCSSTTGGGS-TTT----------CGGGSCCTTCC-CEEEEEETT
T ss_pred ccHHHhcc----CC--------CCHHHHH-HHHHHhCCCCccccC-ccc----------CcccccccCCC-cceEEEcCC
Confidence 00000000 00 0000000 000000000000000 000 00112334444 999999999
Q ss_pred CcccCchhHHHHHHHh--cCCCCcEEEecCCCccccccC-CchhHHHHHHHHHHHHHHHHh
Q 020630 259 DGVTCPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+++.. ..+.+.+ .+.+++++++++++|.+.... ..+..+++.+.+.+||+++++
T Consensus 251 D~~~~~~--~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 251 DPLRDEG--ELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CTTHHHH--HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCchHHH--HHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9998633 3333332 235789999999999887322 245568899999999998764
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=173.65 Aligned_cols=169 Identities=14% Similarity=0.135 Sum_probs=134.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCc---EEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGY---AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~---~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
+|+|||+||++++.. .|..+++.|.++|| +|+++|+||+|.|.. .+.+++++++.++++.+.. .+
T Consensus 3 ~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~-----~~~~~~~~~~~~~~~~~~~------~~ 70 (181)
T 1isp_A 3 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-----NNGPVLSRFVQKVLDETGA------KK 70 (181)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH-----HHHHHHHHHHHHHHHHHCC------SC
T ss_pred CCeEEEECCcCCCHh-HHHHHHHHHHHcCCCCccEEEEecCCCCCchh-----hhHHHHHHHHHHHHHHcCC------Ce
Confidence 689999999998877 88999999999998 799999999998753 2678888888888887753 38
Q ss_pred EEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChh
Q 020630 132 AFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (323)
++++||||||.+++.++.++ |++ |+++|++++....... . . ..
T Consensus 71 ~~lvG~S~Gg~~a~~~~~~~~~~~~-v~~~v~~~~~~~~~~~---------------------~------~----~~--- 115 (181)
T 1isp_A 71 VDIVAHSMGGANTLYYIKNLDGGNK-VANVVTLGGANRLTTG---------------------K------A----LP--- 115 (181)
T ss_dssp EEEEEETHHHHHHHHHHHHSSGGGT-EEEEEEESCCGGGTCS---------------------B------C----CC---
T ss_pred EEEEEECccHHHHHHHHHhcCCCce-EEEEEEEcCccccccc---------------------c------c----CC---
Confidence 99999999999999999987 777 9999999987542210 0 0 00
Q ss_pred hHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCc
Q 020630 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 289 (323)
. .....++|+++++|++|.++|++.+ .+ +++++++++++||
T Consensus 116 -------------~-------------------~~~~~~~p~l~i~G~~D~~v~~~~~-----~~--~~~~~~~~~~~gH 156 (181)
T 1isp_A 116 -------------G-------------------TDPNQKILYTSIYSSADMIVMNYLS-----RL--DGARNVQIHGVGH 156 (181)
T ss_dssp -------------C-------------------SCTTCCCEEEEEEETTCSSSCHHHH-----CC--BTSEEEEESSCCT
T ss_pred -------------C-------------------CCCccCCcEEEEecCCCcccccccc-----cC--CCCcceeeccCch
Confidence 0 0011257999999999999998743 24 6789999999999
Q ss_pred cccccCCchhHHHHHHHHHHHHHHH
Q 020630 290 SLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 290 ~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+.+++ ++.+.|.+||.+.
T Consensus 157 ~~~~~~~-----~~~~~i~~fl~~~ 176 (181)
T 1isp_A 157 IGLLYSS-----QVNSLIKEGLNGG 176 (181)
T ss_dssp GGGGGCH-----HHHHHHHHHHTTT
T ss_pred HhhccCH-----HHHHHHHHHHhcc
Confidence 9985442 4888999998754
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=174.96 Aligned_cols=180 Identities=17% Similarity=0.240 Sum_probs=139.0
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhc--CCcEEEEeccc-------------------cCcCCCCCCCCCCChHHHH
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYAT--WGYAVFAADLL-------------------GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~g~~vi~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 111 (323)
+++|+||++||++++.. .|..+++.|++ +||.|+++|+| |+|.+.. ....++++.+
T Consensus 22 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~--~~~~~~~~~~ 98 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARA--IDEDQLNASA 98 (226)
T ss_dssp TCCEEEEEECCTTCCGG-GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTC--BCHHHHHHHH
T ss_pred CCCCEEEEEecCCCChH-HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccccc--ccchhHHHHH
Confidence 45899999999998877 78999999987 89999998776 5554322 2223678888
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh-hcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF-QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
+++..+++.+.. ..++..+++++|||+||.+++.+|. ++|++ ++++|++++.......
T Consensus 99 ~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-~~~~v~~~~~~~~~~~------------------- 157 (226)
T 3cn9_A 99 DQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQP-LGGVLALSTYAPTFDD------------------- 157 (226)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSC-CSEEEEESCCCGGGGG-------------------
T ss_pred HHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccC-cceEEEecCcCCCchh-------------------
Confidence 999999998854 2223468999999999999999999 99998 9999999986532100
Q ss_pred ccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHH
Q 020630 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
+ . -....+++|+++++|++|.++|.+.++.+
T Consensus 158 -~---------------------------~---------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~ 188 (226)
T 3cn9_A 158 -L---------------------------A---------------------LDERHKRIPVLHLHGSQDDVVDPALGRAA 188 (226)
T ss_dssp -C---------------------------C---------------------CCTGGGGCCEEEEEETTCSSSCHHHHHHH
T ss_pred -h---------------------------h---------------------hcccccCCCEEEEecCCCCccCHHHHHHH
Confidence 0 0 00145689999999999999999999999
Q ss_pred HHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 271 YEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 271 ~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+.. .++++++++ +||... .+ ..+.+.+||+++
T Consensus 189 ~~~l~~~g~~~~~~~~~-~gH~~~----~~----~~~~i~~~l~~~ 225 (226)
T 3cn9_A 189 HDALQAQGVEVGWHDYP-MGHEVS----LE----EIHDIGAWLRKR 225 (226)
T ss_dssp HHHHHHTTCCEEEEEES-CCSSCC----HH----HHHHHHHHHHHH
T ss_pred HHHHHHcCCceeEEEec-CCCCcc----hh----hHHHHHHHHHhh
Confidence 988842 258999999 999987 33 346688888765
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=175.03 Aligned_cols=183 Identities=19% Similarity=0.239 Sum_probs=139.6
Q ss_pred CCCceEEEEecCCCCCcchhhHHHHHHHhc--CCcEEEEeccc-------------------cCcCCCCCCCCCCChHHH
Q 020630 52 QKVKATVYMTHGYGSDTGWMFQKICISYAT--WGYAVFAADLL-------------------GHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 52 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~g~~vi~~d~~-------------------G~G~s~~~~~~~~~~~~~ 110 (323)
.+++|+||++||++++.. .|..+++.|++ +||.|+++|+| |+|.+.. ....++++.
T Consensus 11 ~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~--~~~~~~~~~ 87 (218)
T 1auo_A 11 KPADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS--ISLEELEVS 87 (218)
T ss_dssp SCCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE--ECHHHHHHH
T ss_pred CCCCcEEEEEecCCCChh-hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccc--cchHHHHHH
Confidence 366899999999998877 78999999997 89999998765 4554321 122357788
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh-hcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF-QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
++++..+++.+.. ..++..+++++|||+||.+++.+|. ++|++ ++++|++++..... .
T Consensus 88 ~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-~~~~v~~~~~~~~~-~------------------ 146 (218)
T 1auo_A 88 AKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGP-LGGVIALSTYAPTF-G------------------ 146 (218)
T ss_dssp HHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSC-CCEEEEESCCCTTC-C------------------
T ss_pred HHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCC-ccEEEEECCCCCCc-h------------------
Confidence 8999999998854 2333568999999999999999999 99988 99999999875420 0
Q ss_pred cccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHH
Q 020630 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
+. . .+ ....+++|+++++|++|.++|.+.++.
T Consensus 147 --~~-------------~------------~~---------------------~~~~~~~P~l~i~G~~D~~~~~~~~~~ 178 (218)
T 1auo_A 147 --DE-------------L------------EL---------------------SASQQRIPALCLHGQYDDVVQNAMGRS 178 (218)
T ss_dssp --TT-------------C------------CC---------------------CHHHHTCCEEEEEETTCSSSCHHHHHH
T ss_pred --hh-------------h------------hh---------------------hhcccCCCEEEEEeCCCceecHHHHHH
Confidence 00 0 00 003457899999999999999999999
Q ss_pred HHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 270 LYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+.. .++++++++ +||... .+ ..+.+.+||.+.+
T Consensus 179 ~~~~l~~~g~~~~~~~~~-~gH~~~----~~----~~~~~~~~l~~~l 217 (218)
T 1auo_A 179 AFEHLKSRGVTVTWQEYP-MGHEVL----PQ----EIHDIGAWLAARL 217 (218)
T ss_dssp HHHHHHTTTCCEEEEEES-CSSSCC----HH----HHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEEec-CCCccC----HH----HHHHHHHHHHHHh
Confidence 9988843 258899999 999987 33 3456777777654
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-26 Score=181.79 Aligned_cols=250 Identities=12% Similarity=0.092 Sum_probs=158.3
Q ss_pred CCccceeEEecCCCcEEEEEecCCC-CCCceEEEEecC---CCCCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCC
Q 020630 27 GVRNGKEYFETPNGKLFTQSFLPLD-QKVKATVYMTHG---YGSDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 27 ~~~~~~~~~~~~~g~l~~~~~~~~~-~~~~~~vv~~hG---~~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~ 101 (323)
.+..++..+...+|++.++.|.|.+ .++.|+||++|| ++++.. .|..+++.|+++ ||.|+++|+||+|.+.
T Consensus 45 ~~~~~~~~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~~~~~--- 120 (310)
T 2hm7_A 45 VAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHK--- 120 (310)
T ss_dssp CSEEEEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSC---
T ss_pred cceEEEEEeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChh-HhHHHHHHHHHhcCCEEEEeCCCCCCCCC---
Confidence 3445666777777789999998875 456899999999 556655 788899999875 9999999999999763
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhcCC----CCeeEEEEccCccCCCCCCch
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~il~~~~~~~~~~~~~ 174 (323)
+....+|+.++++++.... .++..+++|+||||||.+|+.+|.++|+ . ++++|+++|..........
T Consensus 121 -----~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~-v~~~vl~~p~~~~~~~~~~ 194 (310)
T 2hm7_A 121 -----FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPA-LAFQLLIYPSTGYDPAHPP 194 (310)
T ss_dssp -----TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCC-CCCEEEESCCCCCCTTSCC
T ss_pred -----CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCC-ceEEEEEcCCcCCCcccCC
Confidence 3345677777777776542 1224589999999999999999988765 4 9999999998765411111
Q ss_pred hHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEE
Q 020630 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
.. ... ... . ..+..... ......+......... .... ......+..+ .|++++
T Consensus 195 ~~-~~~---~~~----~-------~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~---------p~~~~~l~~~-~P~lii 247 (310)
T 2hm7_A 195 AS-IEE---NAE----G-------YLLTGGMM-LWFRDQYLNSLEELTH-PWFS---------PVLYPDLSGL-PPAYIA 247 (310)
T ss_dssp HH-HHH---TSS----S-------SSSCHHHH-HHHHHHHCSSGGGGGC-TTTC---------GGGCSCCTTC-CCEEEE
T ss_pred cc-hhh---cCC----C-------CCCCHHHH-HHHHHHhCCCCCccCC-ccCC---------CCcCccccCC-CCEEEE
Confidence 00 000 000 0 00000000 0000000000000000 0000 0001123333 399999
Q ss_pred eeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCcccccc-CCchhHHHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQG-EPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+|++|.++ .....+.+.+. +.+++++++++++|.+... ...+..+++.+.+.+||++++
T Consensus 248 ~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 248 TAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp EEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 99999987 45566666653 3457999999999977642 223556889999999998875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-25 Score=178.05 Aligned_cols=246 Identities=12% Similarity=0.057 Sum_probs=156.1
Q ss_pred CccceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCC
Q 020630 28 VRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~ 103 (323)
+..++..+...+|.+.++.|.|.+.++.|+||++||+| ++.. .|..+++.|++. ||.|+++|+||+|++..
T Consensus 63 ~~~~~~~i~~~~~~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~---- 137 (323)
T 3ain_A 63 GKIEDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIE-SYDPLCRAITNSCQCVTISVDYRLAPENKF---- 137 (323)
T ss_dssp SEEEEEEEECSSSEEEEEEEECSSCSCCCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCT----
T ss_pred cEEEEEEecCCCCeEEEEEEecCCCCCCcEEEEECCCccccCChH-HHHHHHHHHHHhcCCEEEEecCCCCCCCCC----
Confidence 34456667776778888999887545679999999955 5555 788899999864 99999999999998742
Q ss_pred CCChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhcCCCCe---eEEEEccCccCCCCCCchhHH
Q 020630 104 LGDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQSEPNTW---TGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v---~~~il~~~~~~~~~~~~~~~~ 177 (323)
....+|+.++++++.... + +..+++|+|||+||.+|+.+|.+++++ + +++|+++|.......... .
T Consensus 138 ----p~~~~d~~~~~~~l~~~~~~lg-d~~~i~l~G~S~GG~lA~~~a~~~~~~-~~~~~~~vl~~p~~~~~~~~~~-~- 209 (323)
T 3ain_A 138 ----PAAVVDSFDALKWVYNNSEKFN-GKYGIAVGGDSAGGNLAAVTAILSKKE-NIKLKYQVLIYPAVSFDLITKS-L- 209 (323)
T ss_dssp ----THHHHHHHHHHHHHHHTGGGGT-CTTCEEEEEETHHHHHHHHHHHHHHHT-TCCCSEEEEESCCCSCCSCCHH-H-
T ss_pred ----cchHHHHHHHHHHHHHhHHHhC-CCceEEEEecCchHHHHHHHHHHhhhc-CCCceeEEEEeccccCCCCCcc-H-
Confidence 234456666666654432 1 356899999999999999999988876 5 899999998764432111 0
Q ss_pred HHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
.... .. ..+...... .....+......... .... .....+..+ .|+|+++|+
T Consensus 210 -~~~~---~~-----------~~l~~~~~~-~~~~~~~~~~~~~~~-~~~s----------p~~~~l~~l-~P~lii~G~ 261 (323)
T 3ain_A 210 -YDNG---EG-----------FFLTREHID-WFGQQYLRSFADLLD-FRFS----------PILADLNDL-PPALIITAE 261 (323)
T ss_dssp -HHHS---SS-----------SSSCHHHHH-HHHHHHCSSGGGGGC-TTTC----------GGGSCCTTC-CCEEEEEET
T ss_pred -HHhc---cC-----------CCCCHHHHH-HHHHHhCCCCcccCC-cccC----------cccCcccCC-CHHHEEECC
Confidence 0000 00 000000000 000000000000000 0000 001123333 399999999
Q ss_pred CCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCC-chhHHHHHHHHHHHHHHHHh
Q 020630 258 ADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|.+++ ....+.+.+. +.+++++++++++|.+....+ .+..+++.+.+.+||++.+.
T Consensus 262 ~D~l~~--~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 262 HDPLRD--QGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp TCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHH--HHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 999873 4455555552 346799999999999986444 35568899999999998875
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=169.10 Aligned_cols=172 Identities=15% Similarity=0.088 Sum_probs=134.1
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
++++|||+||++++....|......+... ++.+|++|++. ++++++++++.++++.+. .+++
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~-------~~~~ 77 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFPH---WQRIRQREWYQ--------ADLDRWVLAIRRELSVCT-------QPVI 77 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCTT---SEECCCSCCSS--------CCHHHHHHHHHHHHHTCS-------SCEE
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcCC---eEEEeccCCCC--------cCHHHHHHHHHHHHHhcC-------CCeE
Confidence 36899999999988733677666554433 46678888752 378999999999998763 3899
Q ss_pred EEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHH
Q 020630 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
++||||||.+++.+|.++|++ |+++|+++|....... +. .
T Consensus 78 l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~--------------------~~-------------~------ 117 (191)
T 3bdv_A 78 LIGHSFGALAACHVVQQGQEG-IAGVMLVAPAEPMRFE--------------------ID-------------D------ 117 (191)
T ss_dssp EEEETHHHHHHHHHHHTTCSS-EEEEEEESCCCGGGGT--------------------CT-------------T------
T ss_pred EEEEChHHHHHHHHHHhcCCC-ccEEEEECCCcccccc--------------------Cc-------------c------
Confidence 999999999999999999998 9999999987542100 00 0
Q ss_pred hhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccc
Q 020630 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
...+.++++|+++++|++|.++|++.++.+.+.+ ++++++++++||+.+.
T Consensus 118 ---------------------------~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~ 167 (191)
T 3bdv_A 118 ---------------------------RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW---DSELVDVGEAGHINAE 167 (191)
T ss_dssp ---------------------------TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH---TCEEEECCSCTTSSGG
T ss_pred ---------------------------ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc---CCcEEEeCCCCccccc
Confidence 0335678899999999999999999999988876 5899999999999986
Q ss_pred cCCchhHHHHHHHHHHHHHHH
Q 020630 294 GEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 294 ~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+...+..+.+ +.+.+||++.
T Consensus 168 ~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 168 AGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp GTCSSCHHHH-HHHHHHHHTT
T ss_pred ccchhHHHHH-HHHHHHHHHh
Confidence 5544444444 8899999764
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=178.52 Aligned_cols=255 Identities=10% Similarity=0.018 Sum_probs=156.4
Q ss_pred CCccceeEEecCCC--cEEEEEecCCC-CCCceEEEEecCCC---CCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCC
Q 020630 27 GVRNGKEYFETPNG--KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 27 ~~~~~~~~~~~~~g--~l~~~~~~~~~-~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~ 99 (323)
++..++..+...+| .+.++.|.|.+ .++.|+||++||++ ++.. .|..++..|++ .||.|+++|+||+|++..
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~ 126 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTF 126 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred CceEEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChh-hhHHHHHHHHHhcCcEEEEecCCCCCCCCC
Confidence 44556777888888 69999998863 35579999999988 5655 67788888887 499999999999998753
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCc
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~ 173 (323)
+ ...+|+.++++++... .+++..+++|+|||+||.+|+.++.++++. .++++|+++|.........
T Consensus 127 ~--------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~ 198 (323)
T 1lzl_A 127 P--------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV 198 (323)
T ss_dssp T--------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH
T ss_pred C--------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCch
Confidence 2 2344555555555431 112245899999999999999999876531 2999999999876543211
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcc----cCCCCCchhHHHHHHhhHHHHhcCCcccc
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR----YTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
. .. .... . ..+..... ......+...... .......... ....+.. .+
T Consensus 199 ~---~~---~~~~----~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~sp~---------~~~~~~~-~~ 250 (323)
T 1lzl_A 199 S---MT---NFVD----T-------PLWHRPNA-ILSWKYYLGESYSGPEDPDVSIYAAPS---------RATDLTG-LP 250 (323)
T ss_dssp H---HH---HCSS----C-------SSCCHHHH-HHHHHHHHCTTCCCTTCSCCCTTTCGG---------GCSCCTT-CC
T ss_pred h---HH---Hhcc----C-------CCCCHHHH-HHHHHHhCCCCcccccccCCCcccCcc---------cCcccCC-CC
Confidence 1 00 0000 0 00000000 0000000000000 0000000000 0011111 26
Q ss_pred cEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhcCC
Q 020630 250 PFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCGP 320 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~~ 320 (323)
|+++++|++|.++ .....+.+.+. +.++++++++|++|.+.+....+..+++.+.+.+||++++....|
T Consensus 251 P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~p 321 (323)
T 1lzl_A 251 PTYLSTMELDPLR--DEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSLSP 321 (323)
T ss_dssp CEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC---
T ss_pred hhheEECCcCCch--HHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999987 34555666552 356899999999998764333455778999999999998765443
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=169.75 Aligned_cols=181 Identities=8% Similarity=0.038 Sum_probs=128.6
Q ss_pred CceEEEEecCCCCCc--chhhHH-HHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCC
Q 020630 54 VKATVYMTHGYGSDT--GWMFQK-ICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~--~~~~~~-~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 129 (323)
++|+|||+||++++. ...|.. +++.|++. ||+|+++|+||++. .+..+++..+++.+.. .
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~-----------~~~~~~~~~~~~~l~~-----~ 66 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT-----------ARESIWLPFMETELHC-----D 66 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT-----------CCHHHHHHHHHHTSCC-----C
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc-----------ccHHHHHHHHHHHhCc-----C
Confidence 478999999999883 125655 78889887 99999999998632 1234566666766653 1
Q ss_pred CCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChh
Q 020630 130 LPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (323)
.+++|+||||||.+++.+|.++| |+++|++++........ ..... .+ ...
T Consensus 67 ~~~~lvG~S~Gg~ia~~~a~~~p---v~~lvl~~~~~~~~~~~-----~~~~~--------~~------------~~~-- 116 (194)
T 2qs9_A 67 EKTIIIGHSSGAIAAMRYAETHR---VYAIVLVSAYTSDLGDE-----NERAS--------GY------------FTR-- 116 (194)
T ss_dssp TTEEEEEETHHHHHHHHHHHHSC---CSEEEEESCCSSCTTCH-----HHHHT--------ST------------TSS--
T ss_pred CCEEEEEcCcHHHHHHHHHHhCC---CCEEEEEcCCccccchh-----hhHHH--------hh------------hcc--
Confidence 48999999999999999999988 89999999876421110 00000 00 000
Q ss_pred hHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCc
Q 020630 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 289 (323)
+ .. ...+..+.+|+++++|++|.++|++.++.+.+.+ ++++.+++++||
T Consensus 117 --------~------~~--------------~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~~gH 165 (194)
T 2qs9_A 117 --------P------WQ--------------WEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL---ETKLHKFTDCGH 165 (194)
T ss_dssp --------C------CC--------------HHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEESSCTT
T ss_pred --------c------cc--------------HHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc---CCeEEEeCCCCC
Confidence 0 00 0112234679999999999999999999998887 479999999999
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 290 SLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 290 ~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+.++| +.+. .+.+||++...
T Consensus 166 ~~~~~~p----~~~~-~~~~fl~~~~~ 187 (194)
T 2qs9_A 166 FQNTEFH----ELIT-VVKSLLKVPAL 187 (194)
T ss_dssp SCSSCCH----HHHH-HHHHHHTCCCC
T ss_pred ccchhCH----HHHH-HHHHHHHhhhh
Confidence 9996555 4454 44599987553
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=176.96 Aligned_cols=180 Identities=17% Similarity=0.196 Sum_probs=136.5
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEe--ccccCcCCCCCCC---CCC---ChHHHHhhHHHHHHHHHhh
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAA--DLLGHGRSDGIRC---YLG---DMEKVAASSLSFFKHVRHS 124 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~--d~~G~G~s~~~~~---~~~---~~~~~~~d~~~~i~~l~~~ 124 (323)
+++|+||++||++++.. .|..+++.|++. |.|+++ |++|+|.|..... ... ++...++|+.++++.+..+
T Consensus 60 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN-QFFDFGARLLPQ-ATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 137 (251)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHSTT-SEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh-HHHHHHHhcCCC-ceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 45899999999998877 888999999875 999999 8999998753211 111 2344467777777776543
Q ss_pred CCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccccccc
Q 020630 125 EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
.. ..+++++||||||.+++.+|.++|++ ++++|++++......
T Consensus 138 ~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~---------------------------------- 180 (251)
T 2r8b_A 138 YQ--AGPVIGLGFSNGANILANVLIEQPEL-FDAAVLMHPLIPFEP---------------------------------- 180 (251)
T ss_dssp HT--CCSEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCCCCSCC----------------------------------
T ss_pred cC--CCcEEEEEECHHHHHHHHHHHhCCcc-cCeEEEEecCCCccc----------------------------------
Confidence 22 56999999999999999999999998 999999998754221
Q ss_pred ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEE-E
Q 020630 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK-I 283 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-~ 283 (323)
......+++|+++++|++|.+++.+.++.+.+.+...+.++. +
T Consensus 181 ------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 224 (251)
T 2r8b_A 181 ------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETV 224 (251)
T ss_dssp ------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEE
T ss_pred ------------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 011234578999999999999999999999998842245554 7
Q ss_pred ecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 284 YDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++||.++ .+ ..+.+.+||.+++
T Consensus 225 ~~~~gH~~~----~~----~~~~~~~~l~~~l 248 (251)
T 2r8b_A 225 WHPGGHEIR----SG----EIDAVRGFLAAYG 248 (251)
T ss_dssp EESSCSSCC----HH----HHHHHHHHHGGGC
T ss_pred ecCCCCccC----HH----HHHHHHHHHHHhc
Confidence 788899987 33 3466777877654
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=179.67 Aligned_cols=237 Identities=13% Similarity=0.135 Sum_probs=149.9
Q ss_pred C-cEEEEEecCCCC-----------------CCceEEEEecCCCC---Ccc-hhhHHHHHHHh-cCCcEEEEeccccCcC
Q 020630 40 G-KLFTQSFLPLDQ-----------------KVKATVYMTHGYGS---DTG-WMFQKICISYA-TWGYAVFAADLLGHGR 96 (323)
Q Consensus 40 g-~l~~~~~~~~~~-----------------~~~~~vv~~hG~~~---~~~-~~~~~~~~~l~-~~g~~vi~~d~~G~G~ 96 (323)
+ .+.++.|.|.+. ++.|+||++||++. +.. ..|..++..|+ +.||.|+++|+||.++
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 159 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPE 159 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 5 788888877642 35699999999664 222 23788889998 6799999999999876
Q ss_pred CCCCCCCCCChHHHHhhHHHHHHHHHhhC----CCCCC-CEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccCC
Q 020630 97 SDGIRCYLGDMEKVAASSLSFFKHVRHSE----PYRDL-PAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVI 168 (323)
Q Consensus 97 s~~~~~~~~~~~~~~~d~~~~i~~l~~~~----~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~~ 168 (323)
+. .....+|+.++++++.... .++.. +++|+||||||.+|+.+|.++++ + ++++|+++|....
T Consensus 160 ~~--------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~-v~~~vl~~p~~~~ 230 (351)
T 2zsh_A 160 NP--------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID-VLGNILLNPMFGG 230 (351)
T ss_dssp SC--------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCC-CCEEEEESCCCCC
T ss_pred CC--------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCC-eeEEEEECCccCC
Confidence 53 3355677888888876532 34466 89999999999999999999887 6 9999999998764
Q ss_pred CCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccc
Q 020630 169 PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT 248 (323)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (323)
......... ... . ........................ ...... ......+.++.
T Consensus 231 ~~~~~~~~~---~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~l~~i~ 284 (351)
T 2zsh_A 231 NERTESEKS---LDG--K------------YFVTVRDRDWYWKAFLPEGEDREH--PACNPF-------SPRGKSLEGVS 284 (351)
T ss_dssp SSCCHHHHH---HTT--T------------SSCCHHHHHHHHHHHSCTTCCTTS--TTTCTT-------STTSCCCTTCC
T ss_pred CcCChhhhh---cCC--C------------cccCHHHHHHHHHHhCCCCCCCCC--cccCCC-------CCCccchhhCC
Confidence 432211100 000 0 000000000000000000000000 000000 00123455666
Q ss_pred c-cEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 249 V-PFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 249 ~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+ |+|+++|++|.+++ ....+.+.+. +.++++++++++||.+++....+..+++.+.|.+||++
T Consensus 285 ~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 285 FPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp CCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 6 99999999999876 3455555552 24789999999999988532236678899999999974
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-24 Score=174.27 Aligned_cols=246 Identities=15% Similarity=0.209 Sum_probs=161.6
Q ss_pred CccceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCC
Q 020630 28 VRNGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~ 103 (323)
+..++..+++.+|.|.++.|.|.+ .+.|+||++||++ ++.. .|..++..|+. .||.|+++|+|+.++.
T Consensus 61 ~~~~~~~~~~~~g~i~~~~~~p~~-~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~V~~~dyr~~p~~------ 132 (326)
T 3ga7_A 61 MTTRTCAVPTPYGDVTTRLYSPQP-TSQATLYYLHGGGFILGNLD-THDRIMRLLARYTGCTVIGIDYSLSPQA------ 132 (326)
T ss_dssp CEEEEEEECCTTSCEEEEEEESSS-SCSCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHCSEEEEECCCCTTTS------
T ss_pred cceEEEEeecCCCCeEEEEEeCCC-CCCcEEEEECCCCcccCChh-hhHHHHHHHHHHcCCEEEEeeCCCCCCC------
Confidence 334667778888899999999876 4459999999988 6655 77888888987 6999999999987654
Q ss_pred CCChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhcCCC-----CeeEEEEccCccCCCCCCchh
Q 020630 104 LGDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQSEPN-----TWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-----~v~~~il~~~~~~~~~~~~~~ 175 (323)
.+....+|+.++++++.... +++..+++|+|+|+||.+|+.++.++++. .++++++++|...........
T Consensus 133 --~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~ 210 (326)
T 3ga7_A 133 --RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRR 210 (326)
T ss_dssp --CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHH
T ss_pred --CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHh
Confidence 34455678888888876642 34567999999999999999999876542 288999998876543221100
Q ss_pred HHHHHHhhcccccccccccCCCcccccccccChhhHHHhhc---CCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEE
Q 020630 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS---NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
. . ...+.. +.......+... ....... +... .....+.+...|++
T Consensus 211 -----~---~---~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~P~l 258 (326)
T 3ga7_A 211 -----L---F---GGAWDG----------LTREDLDMYEKAYLRNDEDRES-PWYC----------LFNNDLTRDVPPCF 258 (326)
T ss_dssp -----H---C---CCTTTT----------CCHHHHHHHHHHHCSSGGGGGC-TTTS----------GGGSCCSSCCCCEE
T ss_pred -----h---h---cCCCCC----------CCHHHHHHHHHHhCCCCCccCC-cccC----------CCcchhhcCCCCEE
Confidence 0 0 000000 000000000000 0000000 0000 01123444567999
Q ss_pred EEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccC-CchhHHHHHHHHHHHHHHHHhh
Q 020630 253 TVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+++|+.|.+++ ....+++.+. +..++++++++++|.+.... ..+..+++.+.+.+||++++..
T Consensus 259 i~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 259 IASAEFDPLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp EEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 99999999983 5566666663 34579999999999986432 2345688999999999998864
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=172.22 Aligned_cols=195 Identities=15% Similarity=0.073 Sum_probs=144.6
Q ss_pred CCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCc---CCCCC-----CCCCCChH
Q 020630 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHG---RSDGI-----RCYLGDME 108 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G---~s~~~-----~~~~~~~~ 108 (323)
.++ .+.|..+.+.. .++|+||++||++++.. .|..+++.|++ ||.|+++|.+++. .+... .....++.
T Consensus 13 ~~~~~l~~~~~~~~~-~~~p~vv~lHG~g~~~~-~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~ 89 (223)
T 3b5e_A 13 LTDLAFPYRLLGAGK-ESRECLFLLHGSGVDET-TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSIL 89 (223)
T ss_dssp BCSSSSCEEEESTTS-SCCCEEEEECCTTBCTT-TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHH
T ss_pred ccCCCceEEEeCCCC-CCCCEEEEEecCCCCHH-HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHHH
Confidence 345 78888777654 45699999999998877 78889999976 8999999988742 11100 01112456
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
..++++.++++.+..+.+++..+++++||||||.+|+.++.++|++ ++++|++++.......
T Consensus 90 ~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~~----------------- 151 (223)
T 3b5e_A 90 AETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGI-VRLAALLRPMPVLDHV----------------- 151 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTS-CSEEEEESCCCCCSSC-----------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccc-cceEEEecCccCcccc-----------------
Confidence 6678888888888665444467999999999999999999999998 9999999986532100
Q ss_pred ccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHH
Q 020630 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
.....+++|+++++|++|.++|.+.++
T Consensus 152 -----------------------------------------------------~~~~~~~~P~li~~G~~D~~v~~~~~~ 178 (223)
T 3b5e_A 152 -----------------------------------------------------PATDLAGIRTLIIAGAADETYGPFVPA 178 (223)
T ss_dssp -----------------------------------------------------CCCCCTTCEEEEEEETTCTTTGGGHHH
T ss_pred -----------------------------------------------------ccccccCCCEEEEeCCCCCcCCHHHHH
Confidence 011235789999999999999999998
Q ss_pred HHHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 269 LLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 269 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+.+.. .++++++++ +||.+. .+ ..+.+.+||++.+.
T Consensus 179 -~~~~l~~~g~~~~~~~~~-~gH~~~----~~----~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 179 -LVTLLSRHGAEVDARIIP-SGHDIG----DP----DAAIVRQWLAGPIA 218 (223)
T ss_dssp -HHHHHHHTTCEEEEEEES-CCSCCC----HH----HHHHHHHHHHCC--
T ss_pred -HHHHHHHCCCceEEEEec-CCCCcC----HH----HHHHHHHHHHhhhh
Confidence 8887732 257899999 999987 22 34678889876553
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=169.09 Aligned_cols=191 Identities=14% Similarity=0.054 Sum_probs=137.9
Q ss_pred EEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCC-----CCCCCChHHHHhhHHHHHH
Q 020630 45 QSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGI-----RCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 45 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~i~ 119 (323)
...+.+..+.+++|||+||+|++.. .|..+++.|...|+.|+++|.+|++.-+.. ......+++..+.+..+++
T Consensus 12 ~~~g~P~~~a~~~Vv~lHG~G~~~~-~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 90 (210)
T 4h0c_A 12 ITSGVPVQRAKKAVVMLHGRGGTAA-DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVA 90 (210)
T ss_dssp EEEESCTTTCSEEEEEECCTTCCHH-HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHH
T ss_pred eeCCCCcccCCcEEEEEeCCCCCHH-HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHH
Confidence 4455554467899999999998876 677888888888999999999987642211 1111235555666667776
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNK 199 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (323)
.+... +++..+++|+|+|+||.+++.++.++|++ ++++|.+++..........
T Consensus 91 ~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~-~~~vv~~sg~l~~~~~~~~------------------------- 143 (210)
T 4h0c_A 91 EIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARK-YGGIIAFTGGLIGQELAIG------------------------- 143 (210)
T ss_dssp HHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSC-CSEEEEETCCCCSSSCCGG-------------------------
T ss_pred HHHHh-CCChhhEEEEEcCCCcchHHHHHHhCccc-CCEEEEecCCCCChhhhhh-------------------------
Confidence 66543 45577999999999999999999999999 9999998875432111000
Q ss_pred cccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CC
Q 020630 200 MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SA 277 (323)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 277 (323)
.......++|++++||++|.++|.+.++++.+.+. +.
T Consensus 144 -----------------------------------------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~ 182 (210)
T 4h0c_A 144 -----------------------------------------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNA 182 (210)
T ss_dssp -----------------------------------------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTC
T ss_pred -----------------------------------------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 00001125799999999999999999988888773 34
Q ss_pred CCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++++++.||.+. .+ -.+.+.+||.
T Consensus 183 ~v~~~~ypg~gH~i~----~~----el~~i~~wL~ 209 (210)
T 4h0c_A 183 AVSQVVYPGRPHTIS----GD----EIQLVNNTIL 209 (210)
T ss_dssp EEEEEEEETCCSSCC----HH----HHHHHHHTTT
T ss_pred CeEEEEECCCCCCcC----HH----HHHHHHHHHc
Confidence 578999999999876 22 3466778874
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=181.36 Aligned_cols=255 Identities=16% Similarity=0.151 Sum_probs=151.4
Q ss_pred CccceeEEecCCC-cEEEEEecCCCC----CCceEEEEecCCCCC---cc-hhhHHHHHHHh-cCCcEEEEeccccCcCC
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLDQ----KVKATVYMTHGYGSD---TG-WMFQKICISYA-TWGYAVFAADLLGHGRS 97 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~----~~~~~vv~~hG~~~~---~~-~~~~~~~~~l~-~~g~~vi~~d~~G~G~s 97 (323)
+..++..+. .+ .+.++.|.|.+. ++.|+||++||++.. .. ..|..++..|+ +.||.|+++|+||++.+
T Consensus 53 v~~~~v~~~--~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~ 130 (338)
T 2o7r_A 53 VLTKDLALN--PLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH 130 (338)
T ss_dssp EEEEEEEEE--TTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT
T ss_pred EEEEEEEec--CCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC
Confidence 333444444 35 777778877542 467999999997732 12 23788888898 67999999999998765
Q ss_pred CCCCCCCCChHHHHhhHHHHHHHHHhhCC------CCCCCEEEEEechhHHHHHHHHhhcCC--------CCeeEEEEcc
Q 020630 98 DGIRCYLGDMEKVAASSLSFFKHVRHSEP------YRDLPAFLFGESMGGAATMLMYFQSEP--------NTWTGLIFSA 163 (323)
Q Consensus 98 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~--------~~v~~~il~~ 163 (323)
......+|+.++++++..... .+..+++|+||||||.+|+.+|.++|+ + |+++|+++
T Consensus 131 --------~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~-v~~~vl~~ 201 (338)
T 2o7r_A 131 --------RLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLK-IKGLVLDE 201 (338)
T ss_dssp --------CTTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCC-EEEEEEES
T ss_pred --------CCchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCc-eeEEEEEC
Confidence 234567888888888876421 112589999999999999999999887 6 99999999
Q ss_pred CccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhc
Q 020630 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
|............ . .... ...................... ........... .... ..+.
T Consensus 202 p~~~~~~~~~~~~--~---~~~~------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~-~~~~ 260 (338)
T 2o7r_A 202 PGFGGSKRTGSEL--R---LAND------------SRLPTFVLDLIWELSLPMGADR--DHEYCNPTAES-EPLY-SFDK 260 (338)
T ss_dssp CCCCCSSCCHHHH--H---TTTC------------SSSCHHHHHHHHHHHSCTTCCT--TSTTTCCC-----CCT-HHHH
T ss_pred CccCCCcCChhhh--c---cCCC------------cccCHHHHHHHHHHhCCCCCCC--CCcccCCCCCC-cccc-cHhh
Confidence 9876443221100 0 0000 0000000000000000000000 00000000000 0000 0122
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+..+.+|+|+++|++|.+++. ...+.+.+. +.++++++++++||.+++.++ +..+++.+.+.+||++++..
T Consensus 261 l~~~~~P~Lvi~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~-~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 261 IRSLGWRVMVVGCHGDPMIDR--QMELAERLEKKGVDVVAQFDVGGYHAVKLEDP-EKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp HHHHTCEEEEEEETTSTTHHH--HHHHHHHHHHTTCEEEEEEESSCCTTGGGTCH-HHHHHHHHHHHHHHC-----
T ss_pred hcCCCCCEEEEECCCCcchHH--HHHHHHHHHHCCCcEEEEEECCCceEEeccCh-HHHHHHHHHHHHHHHhhccc
Confidence 334567999999999999873 344444442 356899999999999986655 45678999999999887643
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=194.85 Aligned_cols=247 Identities=15% Similarity=0.117 Sum_probs=166.9
Q ss_pred cceeEEecCCC-cEEEEEecCCC-------CCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEecccc---CcCC
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLD-------QKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLG---HGRS 97 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~-------~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G---~G~s 97 (323)
.+...+...+| ++.+..+.|.+ +++.|+||++||++++.. ..|..+++.|+++||.|+++|+|| +|.+
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 45566777788 99999998864 245789999999986532 256778889999999999999999 7766
Q ss_pred CCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHH
Q 020630 98 DGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 98 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~ 177 (323)
........--....+|+.+.++++..+..++..+++|+||||||.+++.++.. |++ ++++|+++|..+...
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~-~~~~v~~~~~~~~~~------- 541 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDV-YACGTVLYPVLDLLG------- 541 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCC-CSEEEEESCCCCHHH-------
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCc-eEEEEecCCccCHHH-------
Confidence 42211100112335777777777776654556799999999999999998886 888 999999988754210
Q ss_pred HHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
........+. ..+ ....+...+ ... ..+... .....+.++++|+|+++|+
T Consensus 542 --~~~~~~~~~~--------~~~---------~~~~~~~~~---------~~~-~~~~~~-sp~~~~~~~~~P~lii~G~ 591 (662)
T 3azo_A 542 --WADGGTHDFE--------SRY---------LDFLIGSFE---------EFP-ERYRDR-APLTRADRVRVPFLLLQGL 591 (662)
T ss_dssp --HHTTCSCGGG--------TTH---------HHHHTCCTT---------TCH-HHHHHT-CGGGGGGGCCSCEEEEEET
T ss_pred --Hhcccccchh--------hHh---------HHHHhCCCc---------cch-hHHHhh-ChHhHhccCCCCEEEEeeC
Confidence 0000000000 000 000000000 000 000000 0124456788999999999
Q ss_pred CCcccCchhHHHHHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 258 ADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+|..+|++.++.+++.+.. ..+++++++++||.+.. .+...++.+.+.+||.++++..
T Consensus 592 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 592 EDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRR---KETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp TCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCS---HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCC---hHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999843 23589999999998752 4567889999999999998654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=197.97 Aligned_cols=235 Identities=14% Similarity=0.112 Sum_probs=163.5
Q ss_pred ceeEEecCCC--cEEEEEecCCC---CCCceEEEEecCCCCCcc--hhhHH----HHHHHhcCCcEEEEeccccCcCCCC
Q 020630 31 GKEYFETPNG--KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMFQK----ICISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 31 ~~~~~~~~~g--~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~~~----~~~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
+...+...+| ++.+..+.|.+ .++.|+||++||++.+.. ..|.. +++.|+++||.|+++|+||+|.+..
T Consensus 456 ~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~ 535 (706)
T 2z3z_A 456 RTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA 535 (706)
T ss_dssp EEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch
Confidence 4566777787 89999998865 234689999999776541 13443 6788988999999999999998863
Q ss_pred CCC---CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH
Q 020630 100 IRC---YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~~~---~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~ 176 (323)
... ...--....+|+.++++++.....++..+++|+||||||.+++.+|.++|++ ++++|+++|........ ..+
T Consensus 536 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~-~~~ 613 (706)
T 2z3z_A 536 AFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDV-FKVGVAGGPVIDWNRYA-IMY 613 (706)
T ss_dssp HHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTT-EEEEEEESCCCCGGGSB-HHH
T ss_pred hHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCc-EEEEEEcCCccchHHHH-hhh
Confidence 210 0001134568888889888755333356899999999999999999999998 99999999876422100 000
Q ss_pred HHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEee
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 256 (323)
. ..+...+. .. ...+.. ......+.++++|+|+++|
T Consensus 614 -~---------------------------------~~~~~~~~-----~~----~~~~~~-~~~~~~~~~i~~P~lii~G 649 (706)
T 2z3z_A 614 -G---------------------------------ERYFDAPQ-----EN----PEGYDA-ANLLKRAGDLKGRLMLIHG 649 (706)
T ss_dssp -H---------------------------------HHHHCCTT-----TC----HHHHHH-HCGGGGGGGCCSEEEEEEE
T ss_pred -h---------------------------------hhhcCCcc-----cC----hhhhhh-CCHhHhHHhCCCCEEEEee
Confidence 0 00000000 00 000000 0123456678899999999
Q ss_pred CCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 257 TADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++|..+|++.++.+.+.+. +.++++.+++++||.+..+ ..+.+.+.+.+||++++
T Consensus 650 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 650 AIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP----DRVHLYETITRYFTDHL 706 (706)
T ss_dssp TTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT----HHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc----cHHHHHHHHHHHHHHhC
Confidence 9999999999999988873 3456899999999999843 56789999999998763
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-26 Score=170.11 Aligned_cols=186 Identities=11% Similarity=0.004 Sum_probs=119.6
Q ss_pred ceEEEEecCCCCCcc-hhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 55 KATVYMTHGYGSDTG-WMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
.|+|||+||++++.. +....+.+.+.++ +|+|+++|+||+|. +..+++..+++... .++
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~------------~~~~~l~~~~~~~~------~~~ 63 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA------------EAAEMLESIVMDKA------GQS 63 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH------------HHHHHHHHHHHHHT------TSC
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH------------HHHHHHHHHHHhcC------CCc
Confidence 379999999987754 2234556666554 59999999999984 34566666666665 348
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++|+||||||.+|+.+|.+++.. +..++...+.... ......... ......
T Consensus 64 i~l~G~SmGG~~a~~~a~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~---~~~~~~------------- 114 (202)
T 4fle_A 64 IGIVGSSLGGYFATWLSQRFSIP-AVVVNPAVRPFEL------------LSDYLGENQ---NPYTGQ------------- 114 (202)
T ss_dssp EEEEEETHHHHHHHHHHHHTTCC-EEEESCCSSHHHH------------GGGGCEEEE---CTTTCC-------------
T ss_pred EEEEEEChhhHHHHHHHHHhccc-chheeeccchHHH------------HHHhhhhhc---cccccc-------------
Confidence 99999999999999999999986 6555544432110 000000000 000000
Q ss_pred HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccc
Q 020630 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
....................++++|+|+|+|++|.+||++.+.+++ +++++.+++|+||.+
T Consensus 115 --------------~~~~~~~~~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~-----~~~~l~i~~g~~H~~ 175 (202)
T 4fle_A 115 --------------KYVLESRHIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY-----TPCRQTVESGGNHAF 175 (202)
T ss_dssp --------------EEEECHHHHHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT-----TTSEEEEESSCCTTC
T ss_pred --------------cccchHHHHHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh-----hCCEEEEECCCCcCC
Confidence 0000001111111123445678999999999999999998877653 568999999999974
Q ss_pred cccCCchhHHHHHHHHHHHHH
Q 020630 292 IQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~ 312 (323)
. +. +++.+.|.+||+
T Consensus 176 ~--~~----~~~~~~I~~FL~ 190 (202)
T 4fle_A 176 V--GF----DHYFSPIVTFLG 190 (202)
T ss_dssp T--TG----GGGHHHHHHHHT
T ss_pred C--CH----HHHHHHHHHHHh
Confidence 3 33 346778889986
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=198.23 Aligned_cols=238 Identities=16% Similarity=0.113 Sum_probs=167.1
Q ss_pred ccceeEEecCCC--cEEEEEecCCC---CCCceEEEEecCCCCCcc--hhhH-----HHHHHHhcCCcEEEEeccccCcC
Q 020630 29 RNGKEYFETPNG--KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMFQ-----KICISYATWGYAVFAADLLGHGR 96 (323)
Q Consensus 29 ~~~~~~~~~~~g--~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~~-----~~~~~l~~~g~~vi~~d~~G~G~ 96 (323)
..+...+++.+| ++.+..+.|.+ .++.|+||++||++++.. ..|. .+++.|+++||.|+++|+||+|.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~ 565 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPR 565 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 446677888888 89999998864 245689999999987631 1233 67888989999999999999999
Q ss_pred CCCCCC--CCCCh-HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc
Q 020630 97 SDGIRC--YLGDM-EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 97 s~~~~~--~~~~~-~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~ 173 (323)
|..... ....+ ....+|+.++++++.....++..+++++||||||.+++.+|.++|++ ++++|+++|........
T Consensus 566 s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~- 643 (741)
T 2ecf_A 566 RGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDS-YACGVAGAPVTDWGLYD- 643 (741)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCCGGGSB-
T ss_pred CChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCc-eEEEEEcCCCcchhhhc-
Confidence 763211 00011 23468888889888765433456899999999999999999999998 99999999876432100
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEE
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
..+ . .... ..+. . ....+.. ......+.++++|+|+
T Consensus 644 ~~~-~--------------------------------~~~~-~~~~--------~-~~~~~~~-~~~~~~~~~i~~P~li 679 (741)
T 2ecf_A 644 SHY-T--------------------------------ERYM-DLPA--------R-NDAGYRE-ARVLTHIEGLRSPLLL 679 (741)
T ss_dssp HHH-H--------------------------------HHHH-CCTG--------G-GHHHHHH-HCSGGGGGGCCSCEEE
T ss_pred ccc-c--------------------------------hhhc-CCcc--------c-Chhhhhh-cCHHHHHhhCCCCEEE
Confidence 000 0 0000 0000 0 0000000 0012345678899999
Q ss_pred EeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|++|..++++.++.+++.+. +..+++++++++||.+.. +..+.+.+.+.+||+++++
T Consensus 680 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 680 IHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSG----ADALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCH----HHHHHHHHHHHHHHHHHHC
T ss_pred EccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCC----CchhHHHHHHHHHHHHhcC
Confidence 9999999999999999998884 234689999999999983 3337799999999998864
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-26 Score=176.64 Aligned_cols=206 Identities=10% Similarity=0.064 Sum_probs=132.8
Q ss_pred CCceEEEEecCCCC-----CcchhhHHHHHHH----hcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHh
Q 020630 53 KVKATVYMTHGYGS-----DTGWMFQKICISY----ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRH 123 (323)
Q Consensus 53 ~~~~~vv~~hG~~~-----~~~~~~~~~~~~l----~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~ 123 (323)
+++|+||++||.+. +.. .|..+++.| .+.||+|+++|+|+.+... .....+|+.++++++..
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~-~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~--------~~~~~~d~~~~~~~l~~ 109 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEIT--------NPRNLYDAVSNITRLVK 109 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcCChH-HHHHHHHHHhhhhccCCcEEEEeecccCCCCC--------CCcHHHHHHHHHHHHHH
Confidence 56899999999652 333 788899988 5779999999999876542 23444555555555544
Q ss_pred hCCCCCCCEEEEEechhHHHHHHHHhhc-----------------CCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc
Q 020630 124 SEPYRDLPAFLFGESMGGAATMLMYFQS-----------------EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 124 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------------p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
..+ ..+++|+||||||.+|+.++.++ +++ |+++|++++....... .... ....
T Consensus 110 ~~~--~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~-v~~~v~~~~~~~~~~~------~~~~-~~~~ 179 (273)
T 1vkh_A 110 EKG--LTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQI-VKRVFLLDGIYSLKEL------LIEY-PEYD 179 (273)
T ss_dssp HHT--CCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTT-EEEEEEESCCCCHHHH------HHHC-GGGH
T ss_pred hCC--cCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcc-cceeeeecccccHHHh------hhhc-ccHH
Confidence 322 45899999999999999999986 667 9999999876542100 0000 0000
Q ss_pred ccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh
Q 020630 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
.+. ...+......+.. ....... .....+..+++|+++++|++|.++|.+.
T Consensus 180 ------------~~~---------~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~P~lii~G~~D~~vp~~~ 230 (273)
T 1vkh_A 180 ------------CFT---------RLAFPDGIQMYEE-----EPSRVMP---YVKKALSRFSIDMHLVHSYSDELLTLRQ 230 (273)
T ss_dssp ------------HHH---------HHHCTTCGGGCCC-----CHHHHHH---HHHHHHHHHTCEEEEEEETTCSSCCTHH
T ss_pred ------------HHH---------HHHhcccccchhh-----cccccCh---hhhhcccccCCCEEEEecCCcCCCChHH
Confidence 000 0000000000000 0000000 0111223378999999999999999999
Q ss_pred HHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 267 SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 267 ~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.+.+.+. +.++++.+++++||..++++ +++.+.|.+||
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-----~~~~~~i~~fl 272 (273)
T 1vkh_A 231 TNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-----GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-----HHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCceEEEEeCCCcccccccC-----hHHHHHHHHHc
Confidence 999998883 23578999999999998544 55778887775
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-24 Score=167.63 Aligned_cols=250 Identities=12% Similarity=0.106 Sum_probs=152.2
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
..++..+| ++. .|.|.+ .+.|+||++||+| ++....+..+.+.+++.||+|+++|||+.++. .+.
T Consensus 7 ~~~~~~~~~~~~--~y~p~~-~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--------~~p 75 (274)
T 2qru_A 7 NNQTLANGATVT--IYPTTT-EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--------KID 75 (274)
T ss_dssp EEEECTTSCEEE--EECCSS-SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS--------CHH
T ss_pred ccccccCCeeEE--EEcCCC-CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC--------CCc
Confidence 34555667 664 455653 4579999999988 44432335677778888999999999975432 678
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHh---hcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYF---QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~---~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
..++|+.++++++..+.. ...+++|+|+|+||.+|+.++. ..+.. +++++++++..+..... .... .......
T Consensus 76 ~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~-~~~~vl~~~~~~~~~~~-~~~~-~~~~~~~ 151 (274)
T 2qru_A 76 HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLT-PQFLVNFYGYTDLEFIK-EPRK-LLKQAIS 151 (274)
T ss_dssp HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCC-CSCEEEESCCSCSGGGG-SCCC-SCSSCCC
T ss_pred HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCC-ceEEEEEcccccccccC-Cchh-hcccccc
Confidence 889999999999986531 1348999999999999999987 34666 99999987755411000 0000 0000000
Q ss_pred cccccccccCCCcccccccccChhhH----------HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEe
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKL----------KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
........ ................ ..+...... .. ..... .. ...+..+ .|+++++
T Consensus 152 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~------~~---~~~l~~l-pP~li~~ 217 (274)
T 2qru_A 152 AKEIAAID--QTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPEN-GD-WSAYA------LS---DETLKTF-PPCFSTA 217 (274)
T ss_dssp SGGGTTSC--CSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTT-SC-CGGGC------CC---HHHHHTS-CCEEEEE
T ss_pred HHHHhhhc--ccCCCCCCccccchhhhhhhhhhcchhhccCcccc-cc-cccCC------CC---hhhhcCC-CCEEEEE
Confidence 00000000 0000000000000000 000000000 00 00000 00 0122344 7999999
Q ss_pred eCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 256 GTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
|+.|..++...++.+.+.+ ++++++++++++|.+..+.+....+++.+.+.+||++
T Consensus 218 G~~D~~~~~~~~~~l~~~~--~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 218 SSSDEEVPFRYSKKIGRTI--PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp ETTCSSSCTHHHHHHHHHS--TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred ecCCCCcCHHHHHHHHHhC--CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 9999999988888898888 6789999999999998776767777889999999874
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-25 Score=169.55 Aligned_cols=198 Identities=14% Similarity=0.183 Sum_probs=142.1
Q ss_pred EEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC-----CcEEEEeccccCcCC-----------------CCC
Q 020630 43 FTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW-----GYAVFAADLLGHGRS-----------------DGI 100 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-----g~~vi~~d~~G~G~s-----------------~~~ 100 (323)
.+..+.+.+ ++.|+||++||++++.. .|..+.+.|.++ |++|+++|.++++.+ ...
T Consensus 12 ~~~~~~~~~-~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 89 (239)
T 3u0v_A 12 QRCIVSPAG-RHSASLIFLHGSGDSGQ-GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDC 89 (239)
T ss_dssp CEEEECCSS-CCCEEEEEECCTTCCHH-HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSS
T ss_pred CceecCCCC-CCCcEEEEEecCCCchh-hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCccc
Confidence 344444443 66899999999998876 788888888764 689999888654211 111
Q ss_pred CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHH
Q 020630 101 RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~ 180 (323)
.....++++.++++..+++.... ..++..+++|+||||||.+|+.++.++|+. ++++|++++..........
T Consensus 90 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~~~~~------ 161 (239)
T 3u0v_A 90 PEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQD-VAGVFALSSFLNKASAVYQ------ 161 (239)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTT-SSEEEEESCCCCTTCHHHH------
T ss_pred ccchhhHHHHHHHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccc-cceEEEecCCCCchhHHHH------
Confidence 11112567777888888887653 233466999999999999999999999998 9999999987542210000
Q ss_pred HhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc-EEEEeeCCC
Q 020630 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVHGTAD 259 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D 259 (323)
. .. .....+| +++++|++|
T Consensus 162 --------------------------------~--------------------------~~--~~~~~~pp~li~~G~~D 181 (239)
T 3u0v_A 162 --------------------------------A--------------------------LQ--KSNGVLPELFQCHGTAD 181 (239)
T ss_dssp --------------------------------H--------------------------HH--HCCSCCCCEEEEEETTC
T ss_pred --------------------------------H--------------------------HH--hhccCCCCEEEEeeCCC
Confidence 0 00 1223566 999999999
Q ss_pred cccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
.++|.+.++.+.+.+. +.++++++++++||.+. .+..+.+.+||.+.+...
T Consensus 182 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--------~~~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 182 ELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS--------KTELDILKLWILTKLPGE 234 (239)
T ss_dssp SSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC--------HHHHHHHHHHHHHHCC--
T ss_pred CccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC--------HHHHHHHHHHHHHhCCCc
Confidence 9999998888888874 33689999999999987 235677888988877543
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=172.43 Aligned_cols=179 Identities=13% Similarity=0.116 Sum_probs=127.2
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHH--HhhCCCCCCC
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV--RHSEPYRDLP 131 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l--~~~~~~~~~~ 131 (323)
+.|+|||+||++++.. .|..+++.|+++||.|+++|+||.+.. .+.....+.+.+..... ......+..+
T Consensus 48 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~s~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 119 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS-TYAGLLSHWASHGFVVAAAETSNAGTG-------REMLACLDYLVRENDTPYGTYSGKLNTGR 119 (258)
T ss_dssp CEEEEEEECCTTCCGG-GGHHHHHHHHHHTCEEEEECCSCCTTS-------HHHHHHHHHHHHHHHSSSSTTTTTEEEEE
T ss_pred CceEEEEECCCCCCch-hHHHHHHHHHhCCeEEEEecCCCCccH-------HHHHHHHHHHHhcccccccccccccCccc
Confidence 5799999999998876 889999999999999999999953110 02222222222222100 0011112358
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 132 AFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++||||||.+++.++ .+.+ ++++++++|..... .
T Consensus 120 i~l~G~S~GG~~a~~~a--~~~~-v~~~v~~~~~~~~~-----------------------~------------------ 155 (258)
T 2fx5_A 120 VGTSGHSQGGGGSIMAG--QDTR-VRTTAPIQPYTLGL-----------------------G------------------ 155 (258)
T ss_dssp EEEEEEEHHHHHHHHHT--TSTT-CCEEEEEEECCSST-----------------------T------------------
T ss_pred eEEEEEChHHHHHHHhc--cCcC-eEEEEEecCccccc-----------------------c------------------
Confidence 99999999999999988 3455 99999988643200 0
Q ss_pred HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh-HHHHHHHhcCCCCcEEEecCCCcc
Q 020630 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
+ ....+.++++|+|+++|++|.+++.+. .+.+.+.. +.++++++++++||.
T Consensus 156 ---------~------------------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~H~ 207 (258)
T 2fx5_A 156 ---------H------------------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NVPVFWGERRYVSHF 207 (258)
T ss_dssp ---------C------------------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SSCEEEEEESSCCTT
T ss_pred ---------c------------------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CCCeEEEEECCCCCc
Confidence 0 012346678999999999999999886 77877774 356899999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 291 LIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.++++ .+.+.+.+||++++.
T Consensus 208 ~~~~~~~----~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 208 EPVGSGG----AYRGPSTAWFRFQLM 229 (258)
T ss_dssp SSTTTCG----GGHHHHHHHHHHHHH
T ss_pred cccchHH----HHHHHHHHHHHHHhc
Confidence 9977664 477788888887663
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-25 Score=171.43 Aligned_cols=223 Identities=13% Similarity=0.036 Sum_probs=140.5
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+.+ |. .+|+|+++|+||++.+.... ++++++++++.++++.+.. ..++
T Consensus 19 ~~~~~lv~lhg~~~~~~-~~~~~~~-l~-~~~~v~~~d~~G~~~~~~~~---~~~~~~~~~~~~~i~~~~~-----~~~~ 87 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAF-SYASLPR-LK-SDTAVVGLNCPYARDPENMN---CTHGAMIESFCNEIRRRQP-----RGPY 87 (265)
T ss_dssp TSSEEEEEECCTTCCGG-GGTTSCC-CS-SSEEEEEEECTTTTCGGGCC---CCHHHHHHHHHHHHHHHCS-----SCCE
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHh-cC-CCCEEEEEECCCCCCCCCCC---CCHHHHHHHHHHHHHHhCC-----CCCE
Confidence 45789999999998877 7888888 74 57999999999997665332 4899999999999988753 2389
Q ss_pred EEEEechhHHHHHHHHh---hcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccc-ccccccCh
Q 020630 133 FLFGESMGGAATMLMYF---QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM-VGKAIKDP 208 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~---~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 208 (323)
+|+||||||.+|+.+|. .++++ ++++|++++........... ....+...+..... .+.... ........
T Consensus 88 ~l~GhS~Gg~ia~~~a~~l~~~~~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 161 (265)
T 3ils_A 88 HLGGWSSGGAFAYVVAEALVNQGEE-VHSLIIIDAPIPQAMEQLPR-AFYEHCNSIGLFAT----QPGASPDGSTEPPSY 161 (265)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCSSCCCCCCCH-HHHHHHHHTTTTTT----SSSSCSSSCSCCCTT
T ss_pred EEEEECHhHHHHHHHHHHHHhCCCC-ceEEEEEcCCCCCcccccCH-HHHHHHHHHHHhCC----CccccccCCHHHHHH
Confidence 99999999999999998 67777 99999998765432211111 11111111111100 000000 00000000
Q ss_pred hhHHHhhcCCcccCCCCCchhHHHHHHhhHHH-HhcCCcccccEE-EEeeCC---Cccc--------------CchhHHH
Q 020630 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFL-TVHGTA---DGVT--------------CPTSSKL 269 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l-~i~g~~---D~~~--------------~~~~~~~ 269 (323)
.. ..+...+.....+ ......+++|++ +++|++ |..+ +......
T Consensus 162 -~~----------------~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
T 3ils_A 162 -LI----------------PHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDG 224 (265)
T ss_dssp -HH----------------HHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTT
T ss_pred -HH----------------HHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcch
Confidence 00 0000001100000 122346899988 999999 9987 4444556
Q ss_pred HHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+.+.....++++++++|+||+.+++. +..+++.+.|.+||
T Consensus 225 w~~~~~~~~~~~~~i~gagH~~~~~~--e~~~~v~~~i~~fL 264 (265)
T 3ils_A 225 WDTIMPGASFDIVRADGANHFTLMQK--EHVSIISDLIDRVM 264 (265)
T ss_dssp HHHHSTTCCEEEEEEEEEETTGGGST--TTTHHHHHHHHHHT
T ss_pred HHHhCCccceeEEEcCCCCcceeeCh--hhHHHHHHHHHHHh
Confidence 66665334789999999999999421 23466888888886
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-25 Score=177.00 Aligned_cols=259 Identities=15% Similarity=0.152 Sum_probs=155.8
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCC-CceEEEEecCCC---CCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQK-VKATVYMTHGYG---SDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~-~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~ 102 (323)
..++..+...+| .|.+.+|.|.+.. +.|+||++||++ ++.. ..|..+++.|+++||.|+++|+||+|.|....
T Consensus 81 ~~~~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~- 159 (361)
T 1jkm_A 81 ETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHH- 159 (361)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEEC-
T ss_pred eeeeeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCC-
Confidence 344566778888 9999999887643 569999999987 4432 15777888998889999999999997664221
Q ss_pred CCCChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhh-----cCCCCeeEEEEccCccCCCCCCch
Q 020630 103 YLGDMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQ-----SEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~~v~~~il~~~~~~~~~~~~~ 174 (323)
.......|+.++++++.... + ..+++|+|||+||.+++.++.. +|++ ++++|+++|..........
T Consensus 160 ---~~~~~~~D~~~~~~~v~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~-i~~~il~~~~~~~~~~~~~ 233 (361)
T 1jkm_A 160 ---PFPSGVEDCLAAVLWVDEHRESLG--LSGVVVQGESGGGNLAIATTLLAKRRGRLDA-IDGVYASIPYISGGYAWDH 233 (361)
T ss_dssp ---CTTHHHHHHHHHHHHHHHTHHHHT--EEEEEEEEETHHHHHHHHHHHHHHHTTCGGG-CSEEEEESCCCCCCTTSCH
T ss_pred ---CCCccHHHHHHHHHHHHhhHHhcC--CCeEEEEEECHHHHHHHHHHHHHHhcCCCcC-cceEEEECCcccccccccc
Confidence 22334456666666655431 2 2289999999999999999988 7766 9999999998765322111
Q ss_pred hHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEE
Q 020630 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
........... .. ....+..... ......+......... ...... .. ....+..+. |+|++
T Consensus 234 ~~~~~~~~~~~-~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~p~----~~---~~~~l~~l~-P~Lii 294 (361)
T 1jkm_A 234 ERRLTELPSLV-EN--------DGYFIENGGM-ALLVRAYDPTGEHAED-PIAWPY----FA---SEDELRGLP-PFVVA 294 (361)
T ss_dssp HHHHHHCTHHH-HT--------TTSSSCHHHH-HHHHHHHSSSSTTTTC-TTTCGG----GC---CHHHHTTCC-CEEEE
T ss_pred ccccccCcchh-hc--------cCcccCHHHH-HHHHHHhCCCCCCCCC-cccCcc----cc---ChhhHcCCC-ceEEE
Confidence 10000000000 00 0000000000 0000000000000000 000000 00 012234555 99999
Q ss_pred eeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCcccc-ccCC-chhH-HHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI-QGEP-DENA-NLVLKDMREWIDERV 315 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~~~-~~~~-~~~~~~i~~fl~~~~ 315 (323)
+|++|.+++ .++.+.+.+. +.+++++++++++|.+. ...+ .+.. +++.+.+.+||+++.
T Consensus 295 ~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 295 VNELDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp EETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EcCcCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999987 5566666662 34579999999999887 4322 2334 778999999998765
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=176.48 Aligned_cols=245 Identities=14% Similarity=0.108 Sum_probs=146.8
Q ss_pred cceeEEecCCCcEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHh-cCCcEEEEeccccCcCCCCCCCCCC
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYA-TWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~-~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
.++..+...+|.+.++.| +. .++.|+||++||++ ++.. .|..++..|+ +.||.|+++|+||+|++..+... .
T Consensus 56 ~~~~~i~~~~g~i~~~~y-~~-~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~-~ 131 (311)
T 1jji_A 56 VEDRTIKGRNGDIRVRVY-QQ-KPDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAV-Y 131 (311)
T ss_dssp EEEEEEEETTEEEEEEEE-ES-SSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHH-H
T ss_pred EEEEEecCCCCcEEEEEE-cC-CCCceEEEEECCcccccCChh-HhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcH-H
Confidence 566677777777777777 33 35679999999998 5655 7888889998 56999999999999998643210 1
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhHHHHHHh
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~~~~~~~ 182 (323)
+....++++.+.++.+... ..+++|+|||+||.+|+.++..++++ .++++|+++|..+....... . ..
T Consensus 132 d~~~~~~~l~~~~~~~~~d----~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-~--~~-- 202 (311)
T 1jji_A 132 DCYDATKWVAENAEELRID----PSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPS-L--LE-- 202 (311)
T ss_dssp HHHHHHHHHHHTHHHHTEE----EEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHH-H--HH--
T ss_pred HHHHHHHHHHhhHHHhCCC----chhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCcc-H--HH--
Confidence 2223333333333333322 44899999999999999999876532 29999999998765432111 0 00
Q ss_pred hcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCccc
Q 020630 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.... . .. +...... .....+......... .... .....+..+ .|+++++|+.|.++
T Consensus 203 -~~~~----~--~~----~~~~~~~-~~~~~~~~~~~~~~~-~~~~----------p~~~~l~~~-~P~li~~G~~D~l~ 258 (311)
T 1jji_A 203 -FGEG----L--WI----LDQKIMS-WFSEQYFSREEDKFN-PLAS----------VIFADLENL-PPALIITAEYDPLR 258 (311)
T ss_dssp -TSSS----C--SS----CCHHHHH-HHHHHHCSSGGGGGC-TTTS----------GGGSCCTTC-CCEEEEEEEECTTH
T ss_pred -hcCC----C--cc----CCHHHHH-HHHHHhCCCCccCCC-cccC----------cccccccCC-ChheEEEcCcCcch
Confidence 0000 0 00 0000000 000000000000000 0000 001223333 49999999999987
Q ss_pred CchhHHHHHHHh--cCCCCcEEEecCCCccccccCC-chhHHHHHHHHHHHHHH
Q 020630 263 CPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDE 313 (323)
Q Consensus 263 ~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~ 313 (323)
+ ....+.+.+ .+.+++++++++++|.+....+ .+..+++.+.+.+||++
T Consensus 259 ~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 259 D--EGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp H--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred H--HHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 4 334444444 2356899999999998875544 35567888999999864
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.3e-25 Score=170.83 Aligned_cols=225 Identities=14% Similarity=0.115 Sum_probs=144.7
Q ss_pred ecCCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhHH---HHHHHhcCCcEEEEeccccCcCCCCCCCCC-----
Q 020630 36 ETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQK---ICISYATWGYAVFAADLLGHGRSDGIRCYL----- 104 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~----- 104 (323)
....| .+.+.++.|.+ .++.|+||++||++++.. .|.. +.+.+.+.||.|+++|+||+|.|.......
T Consensus 22 s~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~ 100 (278)
T 3e4d_A 22 SETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHA-NVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGK 100 (278)
T ss_dssp ETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBT
T ss_pred ccccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccC
Confidence 45567 89999999875 456799999999998866 5555 455555669999999999999885432000
Q ss_pred ----------------CC-hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 105 ----------------GD-MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 105 ----------------~~-~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.. .+.+++++..+++.. ..++..+++|+||||||.+|+.+|.++|+. ++++++++|...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~ 176 (278)
T 3e4d_A 101 GAGFYLDATEEPWSEHYQMYSYVTEELPALIGQH---FRADMSRQSIFGHSMGGHGAMTIALKNPER-FKSCSAFAPIVA 176 (278)
T ss_dssp TBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHH---SCEEEEEEEEEEETHHHHHHHHHHHHCTTT-CSCEEEESCCSC
T ss_pred CccccccCCcCcccchhhHHHHHHHHHHHHHHhh---cCCCcCCeEEEEEChHHHHHHHHHHhCCcc-cceEEEeCCccc
Confidence 01 223344555555543 222236899999999999999999999998 999999998765
Q ss_pred CCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc
Q 020630 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
......... .+...+. ........ ..... ....+ +.
T Consensus 177 ~~~~~~~~~---~~~~~~~-----------------------------~~~~~~~~----~~~~~-------~~~~~-~~ 212 (278)
T 3e4d_A 177 PSSADWSEP---ALEKYLG-----------------------------ADRAAWRR----YDACS-------LVEDG-AR 212 (278)
T ss_dssp GGGCTTTHH---HHHHHHC-----------------------------SCGGGGGG----GCHHH-------HHHTT-CC
T ss_pred ccCCccchh---hHHHhcC-----------------------------CcHHHHHh----cChhh-------HhhcC-CC
Confidence 332111100 0000000 00000000 00000 11111 13
Q ss_pred cccEEEEeeCCCcccCchh-HHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 248 TVPFLTVHGTADGVTCPTS-SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+|+++++|++|.+++... .+.+.+.+. +.++++.++++++|.+. ..+...+.+.+|+.+.+
T Consensus 213 ~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 213 FPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYY------FISTFMDDHLKWHAERL 277 (278)
T ss_dssp CSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHH------HHHHHHHHHHHHHHHhc
Confidence 5699999999999998532 566666663 23468899999999875 34557777888888765
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=5.7e-25 Score=194.45 Aligned_cols=237 Identities=14% Similarity=0.065 Sum_probs=161.4
Q ss_pred eEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc----chhhHHHHHHHh-cCCcEEEEeccccCcCCCCCC--
Q 020630 33 EYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQKICISYA-TWGYAVFAADLLGHGRSDGIR-- 101 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~----~~~~~~~~~~l~-~~g~~vi~~d~~G~G~s~~~~-- 101 (323)
..+ ..+| ++.+..+.|.+ .++.|+||++||++++. .|.+. +...|+ ++||.|+++|+||+|.+....
T Consensus 477 ~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~-~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~ 554 (740)
T 4a5s_A 477 DFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLN-WATYLASTENIIVASFDGRGSGYQGDKIMH 554 (740)
T ss_dssp EEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCS-HHHHHHHTTCCEEEEECCTTCSSSCHHHHG
T ss_pred EEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcC-HHHHHHhcCCeEEEEEcCCCCCcCChhHHH
Confidence 344 7789 99999999875 34579999999997662 22212 334454 589999999999999765321
Q ss_pred -CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHH
Q 020630 102 -CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 102 -~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~ 180 (323)
....--....+|+.++++++.....++..+++|+||||||.+|+.+|.++|+. ++++|+++|..+..... ..+ .
T Consensus 555 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~v~~~p~~~~~~~~-~~~-~-- 629 (740)
T 4a5s_A 555 AINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV-FKCGIAVAPVSRWEYYD-SVY-T-- 629 (740)
T ss_dssp GGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSC-CSEEEEESCCCCGGGSB-HHH-H--
T ss_pred HHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCc-eeEEEEcCCccchHHhh-hHH-H--
Confidence 00001123468888888888855434457899999999999999999999998 99999999876532110 000 0
Q ss_pred HhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccc-cEEEEeeCCC
Q 020630 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTVHGTAD 259 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D 259 (323)
..+...+ ........+... .....+.++++ |+|+++|+.|
T Consensus 630 -------------------------------~~~~~~p-------~~~~~~~~~~~~-~~~~~~~~i~~~P~Lii~G~~D 670 (740)
T 4a5s_A 630 -------------------------------ERYMGLP-------TPEDNLDHYRNS-TVMSRAENFKQVEYLLIHGTAD 670 (740)
T ss_dssp -------------------------------HHHHCCS-------STTTTHHHHHHS-CSGGGGGGGGGSEEEEEEETTC
T ss_pred -------------------------------HHHcCCC-------CccccHHHHHhC-CHHHHHhcCCCCcEEEEEcCCC
Confidence 0000000 000000000000 01234566776 9999999999
Q ss_pred cccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
..+|++.+..+.+.+. +.++++.+++++||.+.. .+..+.+.+.+.+||.+++...
T Consensus 671 ~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 671 DNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIAS---STAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCS---HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCC---CccHHHHHHHHHHHHHHHcCCC
Confidence 9999999999988873 345788999999999842 4567889999999999998654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.1e-25 Score=192.55 Aligned_cols=255 Identities=11% Similarity=0.058 Sum_probs=169.2
Q ss_pred CCccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCC-
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGI- 100 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~- 100 (323)
.+..++..+++.|| +|.+..+.|.+ .++.|+||++||.++.. ...|......|+++||.|+++|+||+|.+...
T Consensus 414 ~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 493 (695)
T 2bkl_A 414 QYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAW 493 (695)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred HCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 34556778888899 99999998764 34679999999976543 22344445567788999999999998876421
Q ss_pred --CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 101 --RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 101 --~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
...........+|+.++++++..+...+..+++++|||+||.+++.++.++|++ ++++|+.+|..++.....
T Consensus 494 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~-~~~~v~~~~~~d~~~~~~----- 567 (695)
T 2bkl_A 494 HDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPEL-YGAVVCAVPLLDMVRYHL----- 567 (695)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGG-----
T ss_pred HHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcc-eEEEEEcCCccchhhccc-----
Confidence 111113455678999999999876555567999999999999999999999998 999999998775431100
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccc--ccEEEEee
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT--VPFLTVHG 256 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~g 256 (323)
. ...... ... + ..+ .. ......+.... ....+.+++ +|+|+++|
T Consensus 568 ---------~-------~~~~~~--------~~~-~-g~~------~~-~~~~~~~~~~s-p~~~~~~~~~~~P~Li~~G 613 (695)
T 2bkl_A 568 ---------F-------GSGRTW--------IPE-Y-GTA------EK-PEDFKTLHAYS-PYHHVRPDVRYPALLMMAA 613 (695)
T ss_dssp ---------S-------TTGGGG--------HHH-H-CCT------TS-HHHHHHHHHHC-GGGCCCSSCCCCEEEEEEE
T ss_pred ---------c-------CCCcch--------HHH-h-CCC------CC-HHHHHHHHhcC-hHhhhhhcCCCCCEEEEee
Confidence 0 000000 000 0 000 00 00000000000 123345544 69999999
Q ss_pred CCCcccCchhHHHHHHHhcC-----CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh-cCCCCC
Q 020630 257 TADGVTCPTSSKLLYEKASS-----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER-CGPKNC 323 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~-~~~~~~ 323 (323)
++|..+++..+..+++.+.. ..+++++++++||... .+.+...+....+.+||.++++. ..+..|
T Consensus 614 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~~fl~~~l~~~~~~~~~ 684 (695)
T 2bkl_A 614 DHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGA--DQVAKAIESSVDLYSFLFQVLDVQGAQGGV 684 (695)
T ss_dssp TTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBC--SCHHHHHHHHHHHHHHHHHHTTC-------
T ss_pred CCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCC--CCHHHHHHHHHHHHHHHHHHcCCCCCCcch
Confidence 99999999999999988843 3478999999999984 12344566778899999999864 334444
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=197.24 Aligned_cols=237 Identities=14% Similarity=0.097 Sum_probs=162.5
Q ss_pred cceeEEecCCCcEEEEEecCCC---CCCceEEEEecCCCCCc----chhhHHHHHHHhcCCcEEEEeccccCcCCCCC--
Q 020630 30 NGKEYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQKICISYATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~hG~~~~~----~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-- 100 (323)
.+...+++.+|++.+..+.|.+ .++.|+||++||++++. .|.+......|+++||.|+++|+||+|.+...
T Consensus 468 ~~~~~~~~~~g~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~ 547 (723)
T 1xfd_A 468 VEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLL 547 (723)
T ss_dssp CCBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHH
T ss_pred ceEEEEEcCCceEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHH
Confidence 4566677777788889998864 34579999999988752 22333556677778999999999999985311
Q ss_pred -CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCccCCCCCCchh
Q 020630 101 -RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 101 -~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~~~~~~~~~~ 175 (323)
......-....+|+.++++++.....++..+++|+||||||.+++.++.++ |++ ++++|++++........ .
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~-~~~~v~~~~~~~~~~~~-~- 624 (723)
T 1xfd_A 548 HEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQT-FTCGSALSPITDFKLYA-S- 624 (723)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCC-CSEEEEESCCCCTTSSB-H-
T ss_pred HHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCe-EEEEEEccCCcchHHhh-h-
Confidence 000001124567888888887765333356899999999999999999999 888 99999999876543210 0
Q ss_pred HHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccc-ccEEEE
Q 020630 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT-VPFLTV 254 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i 254 (323)
....... . .+. . ....+... . ....+.+++ +|+|++
T Consensus 625 ~~~~~~~---~--------~~~--------~----------~~~~~~~~-~-------------~~~~~~~~~~~P~lii 661 (723)
T 1xfd_A 625 AFSERYL---G--------LHG--------L----------DNRAYEMT-K-------------VAHRVSALEEQQFLII 661 (723)
T ss_dssp HHHHHHH---C--------CCS--------S----------CCSSTTTT-C-------------THHHHTSCCSCEEEEE
T ss_pred hccHhhc---C--------Ccc--------C----------ChhHHHhc-C-------------hhhHHhhcCCCCEEEE
Confidence 0000000 0 000 0 00000000 0 112345677 799999
Q ss_pred eeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+|++|..+|++.++.+++.+. +.++++++++++||.+. ..+..+.+.+.+.+||.+++
T Consensus 662 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 662 HPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFT---SSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCC---CHHHHHHHHHHHHHHHTTTT
T ss_pred EeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccc---cCcchHHHHHHHHHHHHHHh
Confidence 999999999999999988873 35679999999999984 14567889999999998764
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=192.17 Aligned_cols=251 Identities=13% Similarity=0.042 Sum_probs=163.1
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCC--
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-- 100 (323)
..+..++..+++.|| +|.+..+.|.+ .++.|+||++||+++.. .+.|......|+++||.|+++|+||+|.+...
T Consensus 457 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~ 536 (741)
T 1yr2_A 457 ADFRVEQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWH 536 (741)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHH
T ss_pred hHCEEEEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHH
Confidence 344557778888999 99999998875 46689999999987653 23455566678889999999999999987321
Q ss_pred -CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 101 -RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 101 -~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
...........+|+.++++++..+...+..+++++|||+||.+++.++.++|++ ++++|+.+|..++.....
T Consensus 537 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~-~~~~v~~~~~~d~~~~~~------ 609 (741)
T 1yr2_A 537 DAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDL-FAAASPAVGVMDMLRFDQ------ 609 (741)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTSGGG------
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchh-heEEEecCCccccccccC------
Confidence 111111234568888888888776544567999999999999999999999998 999999998765432100
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCc-ccc-cEEEEeeC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK-VTV-PFLTVHGT 257 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-P~l~i~g~ 257 (323)
. ............+. . ......+.... ....+.. +++ |+|+++|+
T Consensus 610 --------~-------~~~~~~~~~~g~~~----------------~-~~~~~~~~~~s-p~~~~~~~~~~~P~Li~~G~ 656 (741)
T 1yr2_A 610 --------F-------TAGRYWVDDYGYPE----------------K-EADWRVLRRYS-PYHNVRSGVDYPAILVTTAD 656 (741)
T ss_dssp --------S-------TTGGGGHHHHCCTT----------------S-HHHHHHHHTTC-GGGCCCTTSCCCEEEEEECS
T ss_pred --------C-------CCCchhHHHcCCCC----------------C-HHHHHHHHHcC-chhhhhccCCCCCEEEEeeC
Confidence 0 00000000000000 0 00000000000 1234454 674 99999999
Q ss_pred CCcccCchhHHHHHHHhcC-----CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 258 ADGVTCPTSSKLLYEKASS-----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+|..+++..+..+++.+.. ..+++++++++||.+.. +.....+....+.+||.++++..
T Consensus 657 ~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~~ 720 (741)
T 1yr2_A 657 TDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGK--PIDKQIEETADVQAFLAHFTGLT 720 (741)
T ss_dssp CCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC-----------CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCC--CHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999888732 23788999999999762 22334578889999999988543
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-24 Score=168.60 Aligned_cols=236 Identities=13% Similarity=0.113 Sum_probs=149.6
Q ss_pred cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+.++.+.|.+.++.|+||++||.+ ++.. .|..++..|+. .||.|+++|+|+.++. .+....+|+.+
T Consensus 66 ~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~--------~~~~~~~D~~~ 136 (322)
T 3fak_A 66 GCAAEWVRAPGCQAGKAILYLHGGGYVMGSIN-THRSMVGEISRASQAAALLLDYRLAPEH--------PFPAAVEDGVA 136 (322)
T ss_dssp TEEEEEEECTTCCTTCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHH
T ss_pred CeEEEEEeCCCCCCccEEEEEcCCccccCChH-HHHHHHHHHHHhcCCEEEEEeCCCCCCC--------CCCcHHHHHHH
Confidence 6888888887656789999999976 3334 66777777876 4999999999987654 24455678888
Q ss_pred HHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccc
Q 020630 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 117 ~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+++++... +++..+++|+|||+||.+|+.++.+.++. .++++|+++|..+......... .... .
T Consensus 137 a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~---~~~~-------~-- 203 (322)
T 3fak_A 137 AYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFK---TRAE-------A-- 203 (322)
T ss_dssp HHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHH---HTTT-------T--
T ss_pred HHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHH---HhCc-------c--
Confidence 88888766 44567999999999999999999875432 2899999999877543321110 0000 0
Q ss_pred cCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHH
Q 020630 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
...+.............. ...... .... .....+.. ..|+|+++|+.|.++ ..+..+++.
T Consensus 204 ----~~~~~~~~~~~~~~~~~~-~~~~~~--~~~s----------p~~~~~~~-~pP~li~~g~~D~~~--~~~~~~~~~ 263 (322)
T 3fak_A 204 ----DPMVAPGGINKMAARYLN-GADAKH--PYAS----------PNFANLKG-LPPLLIHVGRDEVLL--DDSIKLDAK 263 (322)
T ss_dssp ----CCSCCSSHHHHHHHHHHT-TSCTTC--TTTC----------GGGSCCTT-CCCEEEEEETTSTTH--HHHHHHHHH
T ss_pred ----CcccCHHHHHHHHHHhcC-CCCCCC--cccC----------CCcccccC-CChHhEEEcCcCccH--HHHHHHHHH
Confidence 000000000000000000 000000 0000 00112222 249999999999874 456666666
Q ss_pred hc--CCCCcEEEecCCCccccccCC-chhHHHHHHHHHHHHHHHHhhc
Q 020630 274 AS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 274 ~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+. +..++++++++++|.+....+ .+..+++.+.+.+||++++...
T Consensus 264 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 264 AKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp HHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 63 346799999999998874332 3456889999999999988643
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=190.82 Aligned_cols=237 Identities=16% Similarity=0.123 Sum_probs=160.8
Q ss_pred ceeEEecCCCcEEEEEecCCC---CCCceEEEEecCCCCCcc--hhhH-HHHHHH-hcCCcEEEEeccccCcCCCCCC--
Q 020630 31 GKEYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMFQ-KICISY-ATWGYAVFAADLLGHGRSDGIR-- 101 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~~-~~~~~l-~~~g~~vi~~d~~G~G~s~~~~-- 101 (323)
+...++..+.++.+..+.|.+ .++.|+||++||++++.. ..|. .+...| +++||.|+++|+||+|.+....
T Consensus 469 ~~~~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~ 548 (719)
T 1z68_A 469 EIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLY 548 (719)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHG
T ss_pred EEEEEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHH
Confidence 344555544489999998865 345689999999987632 1221 234445 4689999999999999986321
Q ss_pred -CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHH
Q 020630 102 -CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 102 -~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~ 180 (323)
....--....+|+.++++++.....++..+++++||||||.+++.++.++|++ ++++|+++|........ ..+ ...
T Consensus 549 ~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~-~~~-~~~ 625 (719)
T 1z68_A 549 AVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGL-FKCGIAVAPVSSWEYYA-SVY-TER 625 (719)
T ss_dssp GGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSC-CSEEEEESCCCCTTTSB-HHH-HHH
T ss_pred HHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCc-eEEEEEcCCccChHHhc-ccc-chh
Confidence 00001134578888899988875434456899999999999999999999988 99999999876543210 000 000
Q ss_pred HhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccc-cEEEEeeCCC
Q 020630 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTVHGTAD 259 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D 259 (323)
. + . .+. .... . ..+... .....+.++++ |+|+++|++|
T Consensus 626 ~---~-g-------~~~--------~~~~-~--------------------~~~~~~-~~~~~~~~~~~~P~li~~G~~D 664 (719)
T 1z68_A 626 F---M-G-------LPT--------KDDN-L--------------------EHYKNS-TVMARAEYFRNVDYLLIHGTAD 664 (719)
T ss_dssp H---H-C-------CSS--------TTTT-H--------------------HHHHHT-CSGGGGGGGTTSEEEEEEETTC
T ss_pred h---c-C-------Ccc--------cccc-h--------------------hhhhhC-CHhHHHhcCCCCcEEEEEeCCC
Confidence 0 0 0 000 0000 0 000000 01234566777 8999999999
Q ss_pred cccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
..+|++.++.+.+.+. +..+++++++++||.+. .+..+.+.+.+.+||++++
T Consensus 665 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 665 DNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLS----GLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCC----THHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCC----cccHHHHHHHHHHHHHHhh
Confidence 9999999999988873 23467999999999995 4567889999999999876
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-24 Score=171.11 Aligned_cols=255 Identities=11% Similarity=0.087 Sum_probs=156.7
Q ss_pred cCCccceeEEecCCCcEEEEEec-CCC-----------------------CCCceEEEEecCCCCC---c-chhhHHHHH
Q 020630 26 QGVRNGKEYFETPNGKLFTQSFL-PLD-----------------------QKVKATVYMTHGYGSD---T-GWMFQKICI 77 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g~l~~~~~~-~~~-----------------------~~~~~~vv~~hG~~~~---~-~~~~~~~~~ 77 (323)
.++..++..+...+| +.++.|. |.. .++.|+||++||.+.. . ...|..++.
T Consensus 60 ~~v~~~dv~~~~~~g-l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~ 138 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG-LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCR 138 (365)
T ss_dssp TTEEEEEEEEETTTT-EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHH
T ss_pred CCCceeeEEecCCCC-ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHH
Confidence 345556777777777 6666665 543 1356999999998642 2 224677888
Q ss_pred HHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhC----CCCCC-CEEEEEechhHHHHHHHHhhc
Q 020630 78 SYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSE----PYRDL-PAFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 78 ~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~----~~~~~-~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
.|+.+ ||.|+++|+|+.+.. .+....+|+.++++++..+. .++.. +++|+|+|+||.+|+.++.+.
T Consensus 139 ~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~ 210 (365)
T 3ebl_A 139 RFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRA 210 (365)
T ss_dssp HHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHH
Confidence 88876 999999999976533 34566789999999997543 34566 899999999999999999876
Q ss_pred CC---CCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCch
Q 020630 152 EP---NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVG 228 (323)
Q Consensus 152 p~---~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (323)
++ . ++++|+++|+............. .. . ........................ ....
T Consensus 211 ~~~~~~-~~g~vl~~p~~~~~~~~~~~~~~---~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 270 (365)
T 3ebl_A 211 ADEGVK-VCGNILLNAMFGGTERTESERRL---DG--K------------YFVTLQDRDWYWKAYLPEDADRDH--PACN 270 (365)
T ss_dssp HHTTCC-CCEEEEESCCCCCSSCCHHHHHH---TT--T------------SSCCHHHHHHHHHHHSCTTCCTTS--TTTC
T ss_pred HhcCCc-eeeEEEEccccCCCcCChhhhhc---CC--C------------cccCHHHHHHHHHHhCCCCCCCCC--cccC
Confidence 54 5 99999999987654332211100 00 0 000000000000000000000000 0000
Q ss_pred hHHHHHHhhHHHHhcCCccc-ccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHH
Q 020630 229 TMREIARVCQYIQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLK 305 (323)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 305 (323)
. .......+..+. .|+|+++|++|.+++. ...+.+.+. +..+++++++|++|.+++....+..+++.+
T Consensus 271 p-------~~~~~~~l~~~~~pP~Li~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~ 341 (365)
T 3ebl_A 271 P-------FGPNGRRLGGLPFAKSLIIVSGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVME 341 (365)
T ss_dssp T-------TSTTCCCCTTSCCCCEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHH
T ss_pred C-------CCCcchhhccCCCCCEEEEEcCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHH
Confidence 0 000012223222 4899999999977643 355555552 356899999999999885533467788999
Q ss_pred HHHHHHHHHHhhc
Q 020630 306 DMREWIDERVERC 318 (323)
Q Consensus 306 ~i~~fl~~~~~~~ 318 (323)
.+.+||+++++..
T Consensus 342 ~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 342 EISDFLNANLYYG 354 (365)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHHhhhcc
Confidence 9999999987554
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=170.54 Aligned_cols=219 Identities=18% Similarity=0.221 Sum_probs=121.5
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.++++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|... ..+++.+.+..+++.+... ...++
T Consensus 11 ~~~~~lv~lhg~g~~~~-~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~-----~~~~~~~~~~~~~~~l~~~---~~~~~ 80 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA-SFRPLHAFLQG-ECEMLAAEPPGHGTNQTS-----AIEDLEELTDLYKQELNLR---PDRPF 80 (242)
T ss_dssp TCCCEEESSCCCCHHHH-HHHHHHHHHCC-SCCCEEEECCSSCCSCCC-----TTTHHHHHHHHTTTTCCCC---CCSSC
T ss_pred CCCceEEEECCCCCCHH-HHHHHHHhCCC-CeEEEEEeCCCCCCCCCC-----CcCCHHHHHHHHHHHHHhh---cCCCE
Confidence 34789999999998876 89999999976 599999999999999643 2223223333333333221 02489
Q ss_pred EEEEechhHHHHHHHHhh------cCCCCeeEEEEccCccC-CCCCCchhHHHHHHhhcccccccccccCCCcccccccc
Q 020630 133 FLFGESMGGAATMLMYFQ------SEPNTWTGLIFSAPLFV-IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~------~p~~~v~~~il~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
+|+||||||.+|+.+|.+ +|+. +++.+.... .................+... ..... ...
T Consensus 81 ~lvGhSmGG~iA~~~A~~~~~~~~~p~~----v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~---- 147 (242)
T 2k2q_B 81 VLFGHSMGGMITFRLAQKLEREGIFPQA----VIISAIQPPHIQRKKVSHLPDDQFLDHIIQL----GGMPA-ELV---- 147 (242)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHHCSSCS----EEEEEEECSCCCSCCCSSCTTHHHHHTTCCT----TCCCC-TTT----
T ss_pred EEEeCCHhHHHHHHHHHHHHHcCCCCCE----EEEECCCCCCCCcccccCCCHHHHHHHHHHh----CCCCh-HHh----
Confidence 999999999999999986 4554 343321111 000000000000000000000 00000 000
Q ss_pred cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHH-HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEe
Q 020630 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
...... ..+ .............. ...+.++++|+++++|++|.+++ .....+.+.. ++.+++++
T Consensus 148 ----~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~--~~~~~~~~ 212 (242)
T 2k2q_B 148 ----ENKEVM---SFF-----LPSFRSDYRALEQFELYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWA--KDITFHQF 212 (242)
T ss_dssp ----HHHHTT---TTC-----CSCHHHHHHHHTCCCCSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTC--CCSEEEEE
T ss_pred ----cCHHHH---HHH-----HHHHHHHHHHHHhcccCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHh--cCCeEEEE
Confidence 000000 000 00111111111000 11256789999999999998864 3344454444 55678888
Q ss_pred cCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 285 DGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++ ||+.+.++| +++.+.|.+||++.
T Consensus 213 ~~-gH~~~~e~p----~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 213 DG-GHMFLLSQT----EEVAERIFAILNQH 237 (242)
T ss_dssp EC-CCSHHHHHC----HHHHHHHHHHHHTT
T ss_pred eC-CceeEcCCH----HHHHHHHHHHhhcc
Confidence 85 999995554 67899999999753
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-24 Score=167.12 Aligned_cols=225 Identities=14% Similarity=0.108 Sum_probs=144.3
Q ss_pred ecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCcchhhHH---HHHHHhcCCcEEEEeccccCcCCCCCCCC-----
Q 020630 36 ETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQK---ICISYATWGYAVFAADLLGHGRSDGIRCY----- 103 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~s~~~~~~----- 103 (323)
...+| ++.+.+|.|.+ .++.|+||++||++++.. .|.. +.+.+.+.|+.|+++|.+++|.+......
T Consensus 24 s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~ 102 (280)
T 3i6y_A 24 SNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDE-NFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ 102 (280)
T ss_dssp ETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSS-HHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST
T ss_pred ccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChh-HHhhcccHHHHHhhCCeEEEEeCCcccccccCccccccccc
Confidence 34567 89999999875 466799999999998865 4544 44556667999999999987765322110
Q ss_pred ---------------CCC-hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 104 ---------------LGD-MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 104 ---------------~~~-~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
... .+.+.+++..+++..... ..+++|+||||||.+|+.+|.++|+. ++++++++|...
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~s~~~~ 177 (280)
T 3i6y_A 103 GAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV----SDKRAIAGHSMGGHGALTIALRNPER-YQSVSAFSPINN 177 (280)
T ss_dssp TCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE----EEEEEEEEETHHHHHHHHHHHHCTTT-CSCEEEESCCCC
T ss_pred CccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC----CCCeEEEEECHHHHHHHHHHHhCCcc-ccEEEEeCCccc
Confidence 001 223345666655433211 24899999999999999999999999 999999998765
Q ss_pred CCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc
Q 020630 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
.... .+....+...+.. ....+.. ..... ....+..
T Consensus 178 ~~~~---~~~~~~~~~~~~~-----------------------------~~~~~~~----~~~~~-------~~~~~~~- 213 (280)
T 3i6y_A 178 PVNC---PWGQKAFTAYLGK-----------------------------DTDTWRE----YDASL-------LMRAAKQ- 213 (280)
T ss_dssp GGGS---HHHHHHHHHHHCS-----------------------------CGGGTGG----GCHHH-------HHHHCSS-
T ss_pred cccC---chHHHHHHHhcCC-----------------------------chHHHHh----cCHHH-------HHHhcCC-
Confidence 3211 1111111110000 0000000 00000 0111111
Q ss_pred cccEEEEeeCCCcccCchh-HHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 248 TVPFLTVHGTADGVTCPTS-SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+|+++++|++|.+++.+. ++.+.+.+. +.++++.++++++|.+. ......+.+.+|+.+.++
T Consensus 214 ~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 214 YVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYY------FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp CCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHHT
T ss_pred CccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHH------HHHHhHHHHHHHHHhhcc
Confidence 5899999999999998744 566666652 34579999999999875 345677888889888764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-24 Score=186.51 Aligned_cols=251 Identities=12% Similarity=0.054 Sum_probs=166.0
Q ss_pred CCccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCC-
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGI- 100 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~- 100 (323)
.+..++..+++.|| +|.+.++.|.+ .++.|+||++||..+.. .+.|......|+++||.|+++|+||.|.....
T Consensus 422 ~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 501 (693)
T 3iuj_A 422 DYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAW 501 (693)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred hCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHH
Confidence 34556778888999 99999998864 25679999999976542 33556666788889999999999999876421
Q ss_pred --CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 101 --RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 101 --~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
...........+|+.++++++..+...+..+++++|||+||++++.++.++|++ ++++|+.+|..++.....
T Consensus 502 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~-~~a~v~~~~~~d~~~~~~----- 575 (693)
T 3iuj_A 502 HLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDL-MRVALPAVGVLDMLRYHT----- 575 (693)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCCTTTGGG-----
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccc-eeEEEecCCcchhhhhcc-----
Confidence 111112334568888999998877555667999999999999999999999999 999999998776432100
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCc-cccc-EEEEee
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK-VTVP-FLTVHG 256 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P-~l~i~g 256 (323)
. .....+ . .. + ..+ .........+.... ....+.+ +++| +|+++|
T Consensus 576 -----~--~~~~~~--------~---------~~-~-g~p------~~~~~~~~~~~~~s-p~~~~~~~~~~Pp~Li~~G 622 (693)
T 3iuj_A 576 -----F--TAGTGW--------A---------YD-Y-GTS------ADSEAMFDYLKGYS-PLHNVRPGVSYPSTMVTTA 622 (693)
T ss_dssp -----S--GGGGGC--------H---------HH-H-CCT------TSCHHHHHHHHHHC-HHHHCCTTCCCCEEEEEEE
T ss_pred -----C--CCchhH--------H---------HH-c-CCc------cCHHHHHHHHHhcC-HHHhhcccCCCCceeEEec
Confidence 0 000000 0 00 0 000 00011011111111 1244566 7887 999999
Q ss_pred CCCcccCchhHHHHHHHhcC-----CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 257 TADGVTCPTSSKLLYEKASS-----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
++|..|++..+..+++.+.. ..+++++++++||.+.. +.+...+....+.+||.++++..
T Consensus 623 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 623 DHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGT--PVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp SSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------C--HHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcc--cHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999998888732 34688999999999862 11445667888999999998654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=173.17 Aligned_cols=247 Identities=10% Similarity=0.056 Sum_probs=155.3
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~ 100 (323)
.++..++..+...+| .|.++.|.|.+ ++.|+||++||.| ++.. .|..++..|+. .||.|+++|+|+.++..
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~-~~~p~vv~~HGgG~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~~-- 131 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP-TPAPVVVYCHAGGFALGNLD-TDHRQCLELARRARCAVVSVDYRLAPEHP-- 131 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC-SSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSC--
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC-CCCcEEEEECCCcCccCChH-HHHHHHHHHHHHcCCEEEEecCCCCCCCC--
Confidence 456667788999999 99999999976 6789999999977 3444 67777888874 49999999999876542
Q ss_pred CCCCCChHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCch
Q 020630 101 RCYLGDMEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~ 174 (323)
+....+|+.++++++... .+++..+++|+|||+||.+|+.++...+++ .++++++++|..+.. .. .
T Consensus 132 ------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~-~ 203 (317)
T 3qh4_A 132 ------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PT-A 203 (317)
T ss_dssp ------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CC-H
T ss_pred ------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CC-c
Confidence 344456666666666543 223355899999999999999999875431 289999999987754 11 1
Q ss_pred hHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEE
Q 020630 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
.. ..... ...+.................. . ...... ....+.. -.|++++
T Consensus 204 ~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~--~--~~~~p~---------~~~~l~~-lpP~li~ 253 (317)
T 3qh4_A 204 SR--SEFRA--------------TPAFDGEAASLMWRHYLAGQTP--S--PESVPG---------RRGQLAG-LPATLIT 253 (317)
T ss_dssp HH--HHTTT--------------CSSSCHHHHHHHHHHHHTTCCC--C--TTTCGG---------GCSCCTT-CCCEEEE
T ss_pred CH--HHhcC--------------CCCcCHHHHHHHHHHhcCCCCC--C--cccCCC---------cccccCC-CCceeEE
Confidence 00 00000 0000000000000000000000 0 000000 0011121 2499999
Q ss_pred eeCCCcccCchhHHHHHHHh--cCCCCcEEEecCCCccccccCC-chhHHHHHHHHHHHHHHHHh
Q 020630 255 HGTADGVTCPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+.|.+++ ....+.+.+ .+.+++++++++++|.+....+ .+..+++.+.+.+||++++.
T Consensus 254 ~G~~D~~~~--~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 254 CGEIDPFRD--EVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp EEEESTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred ecCcCCCch--hHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 999999876 333344443 2357899999999998654322 35678899999999998763
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=187.90 Aligned_cols=249 Identities=11% Similarity=0.025 Sum_probs=168.2
Q ss_pred CCccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc-chhhHHHHHHHhc-CCcEEEEeccccCcCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISYAT-WGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~ 100 (323)
.+..++..+++.|| +|.+..+.|.+ .++.|+||++||+++.. .+.|......|++ +||.|+++|+||+|.+...
T Consensus 434 ~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 434 DYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred ccEEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 34556778888999 99999998864 34679999999987653 2345444456667 8999999999999876421
Q ss_pred ---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHH
Q 020630 101 ---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 101 ---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~ 177 (323)
...........+|+.++++++..+...+..+++++|||+||.+++.++.++|++ ++++|+.+|..++......
T Consensus 514 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~-~~~~v~~~~~~d~~~~~~~--- 589 (710)
T 2xdw_A 514 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDL-FGCVIAQVGVMDMLKFHKY--- 589 (710)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGS---
T ss_pred HHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccc-eeEEEEcCCcccHhhcccc---
Confidence 011112334568888888888776544567999999999999999999999998 9999999987653321000
Q ss_pred HHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC-----cccc-cE
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS-----KVTV-PF 251 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-P~ 251 (323)
... ..+. .. + ..+ .. ......+.... ....+. ++++ |+
T Consensus 590 ---------~~~--------~~~~---------~~-~-g~~------~~-~~~~~~~~~~s-p~~~~~~~~~~~~~~pP~ 633 (710)
T 2xdw_A 590 ---------TIG--------HAWT---------TD-Y-GCS------DS-KQHFEWLIKYS-PLHNVKLPEADDIQYPSM 633 (710)
T ss_dssp ---------TTG--------GGGH---------HH-H-CCT------TS-HHHHHHHHHHC-GGGCCCCCSSTTCCCCEE
T ss_pred ---------CCC--------hhHH---------Hh-C-CCC------CC-HHHHHHHHHhC-cHhhhcccccccCCCCcE
Confidence 000 0000 00 0 000 00 00000000000 123344 6776 99
Q ss_pred EEEeeCCCcccCchhHHHHHHHhc---------CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 252 LTVHGTADGVTCPTSSKLLYEKAS---------SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|+++|++|..+++..+..+++.+. +..+++++++++||.+.. +.....+....+.+||.++++.
T Consensus 634 Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 634 LLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGK--PTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTC--CHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCC--CHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999998888773 234588999999999862 2233567888999999998754
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=181.85 Aligned_cols=250 Identities=10% Similarity=-0.008 Sum_probs=170.7
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCc-chhhHHHH-HHHhcCCcEEEEeccccCcCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKIC-ISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~-~~~~~~~~-~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
..+..++..+++.|| +|.+.++.|.+ .++.|+||++||.++.. ...|.... +.|+++||.|+.+|+||+|.+..
T Consensus 445 ~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~ 524 (711)
T 4hvt_A 445 ENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGP 524 (711)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCH
T ss_pred ccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcch
Confidence 344557778899999 99999998875 35679999999986543 22343333 57888999999999999987642
Q ss_pred C---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH
Q 020630 100 I---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~ 176 (323)
. ...........+|+.++++++..+..++..+++++|+|+||.+++.++.++|++ ++++|+.+|..++......
T Consensus 525 ~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~-f~a~V~~~pv~D~~~~~~~-- 601 (711)
T 4hvt_A 525 EWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPEL-FGAVACEVPILDMIRYKEF-- 601 (711)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGS--
T ss_pred hHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCc-eEEEEEeCCccchhhhhcc--
Confidence 1 111112345668899999999887656678999999999999999999999998 9999999987764321000
Q ss_pred HHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccc--cEEEE
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV--PFLTV 254 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~l~i 254 (323)
.....+. .. + +.+........+... .....+.++++ |+|++
T Consensus 602 ------------------~~~~~~~---------~~-~--------G~p~~~~~~~~l~~~-SP~~~v~~i~~~pPvLii 644 (711)
T 4hvt_A 602 ------------------GAGHSWV---------TE-Y--------GDPEIPNDLLHIKKY-APLENLSLTQKYPTVLIT 644 (711)
T ss_dssp ------------------TTGGGGH---------HH-H--------CCTTSHHHHHHHHHH-CGGGSCCTTSCCCEEEEE
T ss_pred ------------------ccchHHH---------HH-h--------CCCcCHHHHHHHHHc-CHHHHHhhcCCCCCEEEE
Confidence 0000000 00 0 000000000111100 01244566676 99999
Q ss_pred eeCCCcccCchhHHHHHHHh-cC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 255 HGTADGVTCPTSSKLLYEKA-SS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|++|..||+..+..+++.+ .. ..+++++++++||.+.. +..........+.+||.++++.
T Consensus 645 ~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~--~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 645 DSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGS--DLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp EETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCS--SHHHHHHHHHHHHHHHHHHHTC
T ss_pred ecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcC--CcchHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999888 42 35789999999999752 2233455667788999998754
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=171.43 Aligned_cols=219 Identities=15% Similarity=0.134 Sum_probs=145.9
Q ss_pred EEecCCC-cEEEEEecCCC-CCCceEEEEecCCC---CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChH
Q 020630 34 YFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+... + .+.+..|.|.+ .++.|+||++||.+ ++.. .|..+++.|+++||.|+++|+||+|.+ +..
T Consensus 60 ~i~y~-~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~r~~~~~--------~~~ 129 (303)
T 4e15_A 60 HLRYG-EGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMS-MSCSIVGPLVRRGYRVAVMDYNLCPQV--------TLE 129 (303)
T ss_dssp EEECS-STTCEEEEEECTTCCTTCCEEEEECCSTTTSCCGG-GSCTTHHHHHHTTCEEEEECCCCTTTS--------CHH
T ss_pred eeccC-CCCcEEEEEecCCCCCCCCEEEEECCCcCcCCChh-HHHHHHHHHHhCCCEEEEecCCCCCCC--------Chh
Confidence 33334 5 67777777743 35679999999954 3333 566788889999999999999999865 466
Q ss_pred HHHhhHHHHHHHHHh---hCCCCCCCEEEEEechhHHHHHHHHhhcCC-------CCeeEEEEccCccCCCCCCchhHHH
Q 020630 109 KVAASSLSFFKHVRH---SEPYRDLPAFLFGESMGGAATMLMYFQSEP-------NTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-------~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
...+|+.++++++.. ..+ ..+++|+||||||.+++.++.+.+. + |+++|++++..+....
T Consensus 130 ~~~~d~~~~~~~l~~~~~~~~--~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~-v~~~v~~~~~~~~~~~------- 199 (303)
T 4e15_A 130 QLMTQFTHFLNWIFDYTEMTK--VSSLTFAGHXAGAHLLAQILMRPNVITAQRSKM-VWALIFLCGVYDLREL------- 199 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--CSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHT-EEEEEEESCCCCCHHH-------
T ss_pred HHHHHHHHHHHHHHHHhhhcC--CCeEEEEeecHHHHHHHHHHhccccccCccccc-ccEEEEEeeeeccHhh-------
Confidence 777888888888765 222 5689999999999999999986542 4 9999999987653210
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc----cccEEEE
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV----TVPFLTV 254 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~P~l~i 254 (323)
......... ..+. ......... ......+..+ .+|+|++
T Consensus 200 ---~~~~~~~~~--------~~~~-------------~~~~~~~~~-------------sp~~~~~~~~~~~~~~P~lii 242 (303)
T 4e15_A 200 ---SNLESVNPK--------NILG-------------LNERNIESV-------------SPMLWEYTDVTVWNSTKIYVV 242 (303)
T ss_dssp ---HTCTTTSGG--------GTTC-------------CCTTTTTTT-------------CGGGCCCCCGGGGTTSEEEEE
T ss_pred ---hcccccchh--------hhhc-------------CCHHHHHHc-------------CchhhcccccccCCCCCEEEE
Confidence 000000000 0000 000000000 0001223333 8999999
Q ss_pred eeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|++|.+++.+.++.+++.+. +.++++++++++||+.++++..+ ....+.+||.+
T Consensus 243 ~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~~l~~ 299 (303)
T 4e15_A 243 AAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAI----DDSDVSRFLRN 299 (303)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGS----TTSHHHHHHHH
T ss_pred EeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhC----CCcHHHHHHHH
Confidence 999999999999999998884 33679999999999988655543 34445555443
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-24 Score=165.47 Aligned_cols=227 Identities=13% Similarity=0.127 Sum_probs=139.9
Q ss_pred ecCCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhHHH---HHHHhcCCcEEEEecc--ccCcCCCCC-------
Q 020630 36 ETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKI---CISYATWGYAVFAADL--LGHGRSDGI------- 100 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~g~~vi~~d~--~G~G~s~~~------- 100 (323)
....| .+.+.+|.|.+ .++.|+||++||++++.. .|... .+.++++||.|+++|+ ||+|.+...
T Consensus 23 s~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~ 101 (282)
T 3fcx_A 23 SVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGT 101 (282)
T ss_dssp ETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCC
T ss_pred chhcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcchHHHHhhcCCeEEEEeccccCccccccccccccccC
Confidence 34567 89999999875 356799999999998865 55544 5777788999999999 766654311
Q ss_pred ------CCCCCC-------hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 101 ------RCYLGD-------MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 101 ------~~~~~~-------~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
...... ....++++..++ ....+++..+++|+||||||.+|+.+|.++|+. ++++++++|...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~s~~~~ 177 (282)
T 3fcx_A 102 GAGFYVDATEDPWKTNYRMYSYVTEELPQLI---NANFPVDPQRMSIFGHSMGGHGALICALKNPGK-YKSVSAFAPICN 177 (282)
T ss_dssp CCCTTCBCCSTTHHHHCBHHHHHHTHHHHHH---HHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTT-SSCEEEESCCCC
T ss_pred CcccccccCcccccchhhHHHHHHHHHHHHH---HHHcCCCccceEEEEECchHHHHHHHHHhCccc-ceEEEEeCCccC
Confidence 000001 122233444444 333333346899999999999999999999998 999999998765
Q ss_pred CCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc
Q 020630 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
.... .+....+...+. .....+. . .........+..+
T Consensus 178 ~~~~---~~~~~~~~~~~~-----------------------------~~~~~~~------~-----~~~~~~~~~~~~~ 214 (282)
T 3fcx_A 178 PVLC---PWGKKAFSGYLG-----------------------------TDQSKWK------A-----YDATHLVKSYPGS 214 (282)
T ss_dssp GGGS---HHHHHHHHHHHC--------------------------------CCGG------G-----GCHHHHHTTCC--
T ss_pred cccC---chhHHHHHHhcC-----------------------------Cchhhhh------h-----cCHHHHHHhcccC
Confidence 3211 111111000000 0000000 0 0000123445666
Q ss_pred cccEEEEeeCCCcccCchh--HHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 248 TVPFLTVHGTADGVTCPTS--SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+|+++++|++|.++|... .+.+.+.+. +.++++.++++++|.+. ..........+|+.+.++
T Consensus 215 ~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 215 QLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYY------FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp -CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHH------HHHhhhHHHHHHHHHhhc
Confidence 8999999999999986544 335555442 34679999999999876 345566777778777653
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-24 Score=168.44 Aligned_cols=236 Identities=14% Similarity=0.195 Sum_probs=143.7
Q ss_pred cCCC-cEEEEEecCCCCCCceE-EEEecCCC---CCcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKAT-VYMTHGYG---SDTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~-vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
..+| ++ + .|.+..++++ ||++||.+ ++.. .|..++..|+.. ||.|+++|+|+++++. +...
T Consensus 64 ~~~g~~~-~---~p~~~~~~~~~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~dyr~~~~~~--------~~~~ 130 (322)
T 3k6k_A 64 DLGGVPC-I---RQATDGAGAAHILYFHGGGYISGSPS-THLVLTTQLAKQSSATLWSLDYRLAPENP--------FPAA 130 (322)
T ss_dssp EETTEEE-E---EEECTTCCSCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTCEEEEECCCCTTTSC--------TTHH
T ss_pred EECCEeE-E---ecCCCCCCCeEEEEEcCCcccCCChH-HHHHHHHHHHHhcCCEEEEeeCCCCCCCC--------CchH
Confidence 3467 66 3 3333244566 99999976 4444 677888888765 9999999999987653 3345
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
.+|+.++++++... +++..+++|+|||+||.+|+.+|...++. .++++|+++|..+......... .....
T Consensus 131 ~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~---~~~~~--- 203 (322)
T 3k6k_A 131 VDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNS---NLADR--- 203 (322)
T ss_dssp HHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHH---HTGGG---
T ss_pred HHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchh---hccCC---
Confidence 56777777777655 23366999999999999999999875542 2899999999877543321110 00000
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
.................. ...... .... .....+ +...|+|+++|++|.++ ..+
T Consensus 204 ----------~~~~~~~~~~~~~~~~~~-~~~~~~--~~~s----------p~~~~~-~~~pP~li~~G~~D~~~--~~~ 257 (322)
T 3k6k_A 204 ----------DFLAEPDTLGEMSELYVG-GEDRKN--PLIS----------PVYADL-SGLPEMLIHVGSEEALL--SDS 257 (322)
T ss_dssp ----------CSSSCHHHHHHHHHHHHT-TSCTTC--TTTC----------GGGSCC-TTCCCEEEEEESSCTTH--HHH
T ss_pred ----------CCcCCHHHHHHHHHHhcC-CCCCCC--CcCC----------cccccc-cCCCcEEEEECCcCccH--HHH
Confidence 000000000000000000 000000 0000 001111 12369999999999874 456
Q ss_pred HHHHHHhc--CCCCcEEEecCCCccccccCC-chhHHHHHHHHHHHHHHHHhhc
Q 020630 268 KLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 268 ~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
..+.+.+. +.+++++++++++|.+....+ .+..+++.+.+.+||+++++..
T Consensus 258 ~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 258 TTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhcc
Confidence 66666663 346799999999998875433 3557789999999999887544
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-23 Score=163.76 Aligned_cols=226 Identities=14% Similarity=0.126 Sum_probs=143.5
Q ss_pred ecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCcchhhHH---HHHHHhcCCcEEEEeccccCcCCCCCCC------
Q 020630 36 ETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQK---ICISYATWGYAVFAADLLGHGRSDGIRC------ 102 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~s~~~~~------ 102 (323)
...+| ++.+.+|.|.+ .++.|+||++||++++.. .|.. +.+.+.+.|+.|+++|.+++|.+.....
T Consensus 22 s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~ 100 (280)
T 3ls2_A 22 AVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDE-NFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQ 100 (280)
T ss_dssp ETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSST
T ss_pred chhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChh-hhhcchhHHHHHhhCCeEEEEeCCccccccccccccccccc
Confidence 34567 99999999876 456799999999998765 4543 4556666799999999987776532110
Q ss_pred --------------CCCC-hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 103 --------------YLGD-MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 103 --------------~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.... .+.+.+++..+++..... ..+++|+||||||.+|+.++.++|+. ++++++++|...
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~G~S~GG~~a~~~a~~~p~~-~~~~~~~s~~~~ 175 (280)
T 3ls2_A 101 GAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV----TSTKAISGHSMGGHGALMIALKNPQD-YVSASAFSPIVN 175 (280)
T ss_dssp TCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE----EEEEEEEEBTHHHHHHHHHHHHSTTT-CSCEEEESCCSC
T ss_pred CCccccccccccccccccHHHHHHHHHHHHHHhhCCC----CCCeEEEEECHHHHHHHHHHHhCchh-heEEEEecCccC
Confidence 0001 233345555555543221 25899999999999999999999999 999999998765
Q ss_pred CCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC-c
Q 020630 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS-K 246 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (323)
.... .+........+.. ....+.. .... . ....+. .
T Consensus 176 ~~~~---~~~~~~~~~~~g~-----------------------------~~~~~~~----~~~~------~-~~~~~~~~ 212 (280)
T 3ls2_A 176 PINC---PWGVKAFTGYLGA-----------------------------DKTTWAQ----YDSC------K-LMAKAEQS 212 (280)
T ss_dssp GGGS---HHHHHHHHHHHCS-----------------------------CGGGTGG----GCHH------H-HHHTCCGG
T ss_pred cccC---cchhhHHHhhcCc-----------------------------hHHHHHh----cCHH------H-HHHhcccc
Confidence 3211 1111101000000 0000000 0000 0 111111 1
Q ss_pred ccccEEEEeeCCCcccCchh-HHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 247 VTVPFLTVHGTADGVTCPTS-SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+|+++++|++|.+++.+. ++.+.+.+. +.++++.++++++|.+. ........+.+|+.+++.
T Consensus 213 ~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 213 NYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYF------FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp GCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchh------hHHHHHHHHHHHHHHHhc
Confidence 36799999999999999743 555555552 35679999999999876 345567778889888764
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=166.15 Aligned_cols=221 Identities=12% Similarity=0.071 Sum_probs=142.6
Q ss_pred CCceEEEEecCC--CCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGY--GSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+|||+||+ +++.. .|..+++.| ..||+|+++|+||||.+.... .+++++++++.+.++.+.. ..
T Consensus 79 ~~~~~lv~lhG~~~~~~~~-~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~---~~~~~~~~~~~~~l~~~~~-----~~ 148 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQ-VYSRLAEEL-DAGRRVSALVPPGFHGGQALP---ATLTVLVRSLADVVQAEVA-----DG 148 (319)
T ss_dssp CSSCEEEEECCSSTTCSGG-GGHHHHHHH-CTTSEEEEEECTTSSTTCCEE---SSHHHHHHHHHHHHHHHHT-----TS
T ss_pred CCCCeEEEECCCCcCCCHH-HHHHHHHHh-CCCceEEEeeCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcC-----CC
Confidence 347899999996 44444 899999999 557999999999999876443 2789999999998888753 23
Q ss_pred CEEEEEechhHHHHHHHHhhc---CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccC
Q 020630 131 PAFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+++|+||||||.+|+.+|.++ +++ |+++|++++................+...+.. ..
T Consensus 149 ~~~lvGhS~Gg~vA~~~A~~~~~~~~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------- 209 (319)
T 3lcr_A 149 EFALAGHSSGGVVAYEVARELEARGLA-PRGVVLIDSYSFDGDGGRPEELFRSALNERFV---EY--------------- 209 (319)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCC-CSCEEEESCCCCCSSCCHHHHHHHHHHHHHHH---HH---------------
T ss_pred CEEEEEECHHHHHHHHHHHHHHhcCCC-ccEEEEECCCCCCccchhhHHHHHHHHHHHHh---hh---------------
Confidence 899999999999999999987 777 99999999865433210111111100000000 00
Q ss_pred hhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCC
Q 020630 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
..... .... ......+........ .-....+++|+++|+|++ ..+++.....+.+.+. ...+++++++
T Consensus 210 ----~~~~~-~~~~--~~~l~~~~~~~~~~~--~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~-~~~~~~~~~g- 277 (319)
T 3lcr_A 210 ----LRLTG-GGNL--SQRITAQVWCLELLR--GWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLA-AMGQVVEAPG- 277 (319)
T ss_dssp ----HHHHC-CCCH--HHHHHHHHHHHHHTT--TCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHH-TCSEEEEESS-
T ss_pred ----hcccC-CCch--hHHHHHHHHHHHHHh--cCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCC-CCceEEEeCC-
Confidence 00000 0000 000000011111110 012257899999999998 5666677777777773 3467788875
Q ss_pred CccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 288 YHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 288 gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+.+++. +..+++.+.|.+||.+...
T Consensus 278 ~H~~~~~~--~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 278 DHFTIIEG--EHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp CTTGGGST--TTHHHHHHHHHHHHHHHHC
T ss_pred CcHHhhCc--ccHHHHHHHHHHHHHhccc
Confidence 78888642 2468899999999988653
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=163.21 Aligned_cols=197 Identities=21% Similarity=0.154 Sum_probs=143.5
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEeccc------cCcCCCCCC----CC-----
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLL------GHGRSDGIR----CY----- 103 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~------G~G~s~~~~----~~----- 103 (323)
.+.|....+..+++.|+|||+||+|++.. .|..+++.|..+ ++.+++++-| |.|.+.-.. ..
T Consensus 52 ~l~y~~~p~~~~~~~plVI~LHG~G~~~~-~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~ 130 (285)
T 4fhz_A 52 KLTFGRRGAAPGEATSLVVFLHGYGADGA-DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAA 130 (285)
T ss_dssp CCCEEEEESCTTCCSEEEEEECCTTBCHH-HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHH
T ss_pred cceeecCCCCCCCCCcEEEEEcCCCCCHH-HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchh
Confidence 46676666666677899999999998876 677778888754 7888888754 344332110 00
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
...+...++++.++++.+..+.+++..+++++|+|+||.+++.++.++|+. ++++|.+++......
T Consensus 131 ~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~-~a~vv~~sG~l~~~~------------- 196 (285)
T 4fhz_A 131 AEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEE-IAGIVGFSGRLLAPE------------- 196 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSC-CSEEEEESCCCSCHH-------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCccc-CceEEEeecCccCch-------------
Confidence 001233456777888887777777788999999999999999999999998 999998876432100
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccC
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
........+.|+++++|++|.+||
T Consensus 197 --------------------------------------------------------~~~~~~~~~~Pvl~~hG~~D~~Vp 220 (285)
T 4fhz_A 197 --------------------------------------------------------RLAEEARSKPPVLLVHGDADPVVP 220 (285)
T ss_dssp --------------------------------------------------------HHHHHCCCCCCEEEEEETTCSSSC
T ss_pred --------------------------------------------------------hhhhhhhhcCcccceeeCCCCCcC
Confidence 000012236799999999999999
Q ss_pred chhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 264 PTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 264 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.++.+.+.+. +.+++++++++.||.+. . +..+.+.+||++++.
T Consensus 221 ~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~----~----~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 221 FADMSLAGEALAEAGFTTYGHVMKGTGHGIA----P----DGLSVALAFLKERLP 267 (285)
T ss_dssp THHHHHHHHHHHHTTCCEEEEEETTCCSSCC----H----HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCC----H----HHHHHHHHHHHHHCc
Confidence 999998888773 34578899999999876 2 246778999999874
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-24 Score=168.64 Aligned_cols=211 Identities=14% Similarity=0.087 Sum_probs=135.2
Q ss_pred CCceEEEEecCCCCCc--chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHH-HHHHHhhCCCCC
Q 020630 53 KVKATVYMTHGYGSDT--GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF-FKHVRHSEPYRD 129 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~-i~~l~~~~~~~~ 129 (323)
..+++|||+||++++. . .|..+...|.. +|+|+++|+||||.|.... ++++++++++.+. ++.+. .
T Consensus 65 ~~~~~lvllhG~~~~~~~~-~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~---~~~~~~a~~~~~~l~~~~~------~ 133 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPH-EFTRLAGALRG-IAPVRAVPQPGYEEGEPLP---SSMAAVAAVQADAVIRTQG------D 133 (300)
T ss_dssp SCSSEEEECCCSSTTCSTT-TTHHHHHHTSS-SCCBCCCCCTTSSTTCCBC---SSHHHHHHHHHHHHHHHCS------S
T ss_pred CCCCeEEEECCCcccCcHH-HHHHHHHhcCC-CceEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcC------C
Confidence 4578999999999875 5 88999998876 5999999999999986532 4889999888754 44443 3
Q ss_pred CCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccccccccc
Q 020630 130 LPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK 206 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
.+++|+||||||.+|+.+|.++|+ + |+++|++++....... . ...+.. .+...+..... ...
T Consensus 134 ~~~~LvGhS~GG~vA~~~A~~~p~~g~~-v~~lvl~~~~~~~~~~----~-~~~~~~---~~~~~~~~~~~-----~~~- 198 (300)
T 1kez_A 134 KPFVVAGHSAGALMAYALATELLDRGHP-PRGVVLIDVYPPGHQD----A-MNAWLE---ELTATLFDRET-----VRM- 198 (300)
T ss_dssp CCEEEECCTHHHHHHHHHHHHTTTTTCC-CSEEECBTCCCTTTCH----H-HHHHHH---HHHGGGCCCCS-----SCC-
T ss_pred CCEEEEEECHhHHHHHHHHHHHHhcCCC-ccEEEEECCCCCcchh----H-HHHHHH---HHHHHHHhCcC-----Ccc-
Confidence 489999999999999999999884 6 9999999987543220 0 111100 00000000000 000
Q ss_pred ChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC
Q 020630 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
... ....+..+..... ...+.++++|+++|+|+ |..+++.. ..+.+.+. .+.+++++++
T Consensus 199 ~~~----------------~~~~~~~~~~~~~--~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~-~~~~~~~i~g 257 (300)
T 1kez_A 199 DDT----------------RLTALGAYDRLTG--QWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWP-FEHDTVAVPG 257 (300)
T ss_dssp CHH----------------HHHHHHHHHHHTT--TCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCS-SCCEEEEESS
T ss_pred chH----------------HHHHHHHHHHHHh--cCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcC-CCCeEEEecC
Confidence 000 0000011111100 11347789999999995 55665544 23333331 2578999998
Q ss_pred CCccccc-cCCchhHHHHHHHHHHHHHHHH
Q 020630 287 MYHSLIQ-GEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 287 ~gH~~~~-~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
||+.++ +++ +.+.+.|.+||.+..
T Consensus 258 -gH~~~~~e~~----~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 258 -DHFTMVQEHA----DAIARHIDAWLGGGN 282 (300)
T ss_dssp -CTTTSSSSCS----HHHHHHHHHHHTCC-
T ss_pred -CChhhccccH----HHHHHHHHHHHHhcc
Confidence 999986 455 668899999997654
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-23 Score=165.87 Aligned_cols=230 Identities=13% Similarity=0.069 Sum_probs=137.0
Q ss_pred cEEEEEecCCCCCCceEEEEecCCC---CCcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+.++.+.|.+ ++.|+||++||++ ++.. .|..++..|+. .||+|+++|+||.+.. ......+|+.+
T Consensus 83 ~~~~~~~~p~~-~~~p~vv~lHGgg~~~~~~~-~~~~~~~~la~~~g~~vi~~D~r~~~~~--------~~~~~~~d~~~ 152 (326)
T 3d7r_A 83 DMQVFRFNFRH-QIDKKILYIHGGFNALQPSP-FHWRLLDKITLSTLYEVVLPIYPKTPEF--------HIDDTFQAIQR 152 (326)
T ss_dssp TEEEEEEESTT-CCSSEEEEECCSTTTSCCCH-HHHHHHHHHHHHHCSEEEEECCCCTTTS--------CHHHHHHHHHH
T ss_pred CEEEEEEeeCC-CCCeEEEEECCCcccCCCCH-HHHHHHHHHHHHhCCEEEEEeCCCCCCC--------CchHHHHHHHH
Confidence 45556666654 5579999999965 2334 67777888874 4999999999986543 34455566666
Q ss_pred HHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhH-HHHHHhhccccccccc
Q 020630 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSK-LHLFMYGLLFGLADTW 192 (323)
Q Consensus 117 ~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 192 (323)
+++++.... +..+++|+||||||.+|+.+|.++|++ .++++|+++|............ .......
T Consensus 153 ~~~~l~~~~--~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~--------- 221 (326)
T 3d7r_A 153 VYDQLVSEV--GHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDA--------- 221 (326)
T ss_dssp HHHHHHHHH--CGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCS---------
T ss_pred HHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCc---------
Confidence 666654432 145899999999999999999876432 2899999999865432211100 0000000
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
........ .....+............ .....+.. -+|+|+++|++|..+ ..+..+.+
T Consensus 222 -------~~~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~-~~P~lii~G~~D~~~--~~~~~~~~ 278 (326)
T 3d7r_A 222 -------VLSQFGVN-EIMKKWANGLPLTDKRIS------------PINGTIEG-LPPVYMFGGGREMTH--PDMKLFEQ 278 (326)
T ss_dssp -------SCCHHHHH-HHHHHHHTTSCTTSTTTS------------GGGSCCTT-CCCEEEEEETTSTTH--HHHHHHHH
T ss_pred -------ccCHHHHH-HHHHHhcCCCCCCCCeEC------------cccCCccc-CCCEEEEEeCcccch--HHHHHHHH
Confidence 00000000 000000000000000000 00112222 259999999999754 34444544
Q ss_pred Hhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 273 KAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 273 ~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+. +.++++++++++||.+.... .+..+++.+.+.+||++++
T Consensus 279 ~l~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 279 MMLQHHQYIEFYDYPKMVHDFPIYP-IRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp HHHHTTCCEEEEEETTCCTTGGGSS-SHHHHHHHHHHHHHHTSCC
T ss_pred HHHHCCCcEEEEEeCCCcccccccC-CHHHHHHHHHHHHHHHHHh
Confidence 442 35689999999999998532 3667889999999998654
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=156.56 Aligned_cols=210 Identities=14% Similarity=0.118 Sum_probs=140.2
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCc--EEEEeccccCcCCC--CCC---------------CCCCChHHHHhhH
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGY--AVFAADLLGHGRSD--GIR---------------CYLGDMEKVAASS 114 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~vi~~d~~G~G~s~--~~~---------------~~~~~~~~~~~d~ 114 (323)
+.++|||+||++++.. .|..+++.|.+.|+ +|+.+|.+++|.+. +.. ....++.+.++++
T Consensus 5 ~~~pvvliHG~~~~~~-~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 5 KTTATLFLHGYGGSER-SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CCEEEEEECCTTCCGG-GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 4679999999999887 89999999999886 69999999988752 100 0112566788999
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC----CCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
.++++.+....+ ..+++++||||||.+++.++.++|. .+|+++|+++++.......... .
T Consensus 84 ~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--------------~ 147 (249)
T 3fle_A 84 KEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNEN--------------V 147 (249)
T ss_dssp HHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSC--------------T
T ss_pred HHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCC--------------c
Confidence 999999977654 4589999999999999999999874 1399999998776533211000 0
Q ss_pred ccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC------CCcccCc
Q 020630 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT------ADGVTCP 264 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~ 264 (323)
.. ..+... ..+ ......+..+.. ....+.+.++|+|.|+|+ .|..||.
T Consensus 148 ~~-----~~~~~~------------g~p-----~~~~~~~~~l~~----~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~ 201 (249)
T 3fle_A 148 NE-----IIVDKQ------------GKP-----SRMNAAYRQLLS----LYKIYCGKEIEVLNIYGDLEDGSHSDGRVSN 201 (249)
T ss_dssp TT-----SCBCTT------------CCB-----SSCCHHHHHTGG----GHHHHTTTTCEEEEEEEECCSSSCBSSSSBH
T ss_pred ch-----hhhccc------------CCC-----cccCHHHHHHHH----HHhhCCccCCeEEEEeccCCCCCCCCCcccH
Confidence 00 000000 000 000011111111 123345467899999998 6999999
Q ss_pred hhHHHHHHHhcCC--CCcEEEecC--CCccccccCCchhHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSA--DKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 265 ~~~~~~~~~~~~~--~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
..++.+...+... ..+.+++.| +.|....++ .++.+.|.+||
T Consensus 202 ~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n-----~~V~~~I~~FL 247 (249)
T 3fle_A 202 SSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHEN-----KDVANEIIQFL 247 (249)
T ss_dssp HHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCceEEEEEeCCCCchhccccC-----HHHHHHHHHHh
Confidence 9988777666422 124455654 889999543 35888888887
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-22 Score=157.53 Aligned_cols=237 Identities=11% Similarity=0.024 Sum_probs=148.8
Q ss_pred CccceeEEec-CCC-cEEEEEecCCCC-------CCceEEEEecCCCCCcchhhHH--HHHHH-hcCCcEEEEeccccCc
Q 020630 28 VRNGKEYFET-PNG-KLFTQSFLPLDQ-------KVKATVYMTHGYGSDTGWMFQK--ICISY-ATWGYAVFAADLLGHG 95 (323)
Q Consensus 28 ~~~~~~~~~~-~~g-~l~~~~~~~~~~-------~~~~~vv~~hG~~~~~~~~~~~--~~~~l-~~~g~~vi~~d~~G~G 95 (323)
+..++..+.+ ..| ++.+.+|.|.+. ++.|+||++||++++.. .|.. ....+ .+.|+.|+.+|+++++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 83 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN-SWLKRTNVERLLRGTNLIVVMPNTSNGW 83 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT-HHHHHSCHHHHTTTCCCEEEECCCTTST
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH-HHHhccCHHHHHhcCCeEEEEECCCCCc
Confidence 3344555554 456 899999998753 45799999999998876 6665 34444 4569999999999888
Q ss_pred CCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchh
Q 020630 96 RSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~ 175 (323)
.+...... ...+.+++|+..+++....+...+..+++++|||+||.+|+.++. +|++ ++++|+++|..........
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~-~~~~v~~~~~~~~~~~~~~- 159 (263)
T 2uz0_A 84 YTDTQYGF-DYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNR-FSHAASFSGALSFQNFSPE- 159 (263)
T ss_dssp TSBCTTSC-BHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCC-CSEEEEESCCCCSSSCCGG-
T ss_pred cccCCCcc-cHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Cccc-cceEEEecCCcchhhcccc-
Confidence 76544322 135667788888888764312222458999999999999999999 9988 9999999988764431110
Q ss_pred HHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccc--ccEEE
Q 020630 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT--VPFLT 253 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~ 253 (323)
. . ..... ......+......... . . + ....+.++. +|+++
T Consensus 160 ~------~----------~~~~~---------~~~~~~~~~~~~~~~~--~-~---~-------~~~~~~~~~~~~p~li 201 (263)
T 2uz0_A 160 S------Q----------NLGSP---------AYWRGVFGEIRDWTTS--P-Y---S-------LESLAKKSDKKTKLWA 201 (263)
T ss_dssp G------T----------TCSCH---------HHHHHHHCCCSCTTTS--T-T---S-------HHHHGGGCCSCSEEEE
T ss_pred c------c----------ccccc---------hhHHHHcCChhhhccc--c-C---C-------HHHHHHhccCCCeEEE
Confidence 0 0 00000 0000011000000000 0 0 0 011122232 89999
Q ss_pred EeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|++|.+++ .++.+.+.+. +.++++.+++| ||... ..+...+.+.+||.++++
T Consensus 202 ~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~g-~H~~~------~~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 202 WCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSAG-THEWY------YWEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp EEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESC-CSSHH------HHHHHHHHHHHHSSSCCC
T ss_pred EeCCCchhhH--HHHHHHHHHHHCCCCeEEEECCC-CcCHH------HHHHHHHHHHHHHHhhcc
Confidence 9999999884 3456666653 23468999998 99865 234566888899877654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-22 Score=164.59 Aligned_cols=202 Identities=17% Similarity=0.166 Sum_probs=144.1
Q ss_pred ceeEEecC-CC-cEEEEEecCCC---CCCceEEEEecCCCCCcc-hhhHHH----------HHHHhcCCcEEEEeccccC
Q 020630 31 GKEYFETP-NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-WMFQKI----------CISYATWGYAVFAADLLGH 94 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~~~~~~----------~~~l~~~g~~vi~~d~~G~ 94 (323)
+...+... +| ++.+..+.|.+ .++.|+||++||++++.. +.+..+ .......|+.|+++|++|.
T Consensus 145 ~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~ 224 (380)
T 3doh_A 145 LAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPN 224 (380)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTT
T ss_pred cceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCC
Confidence 44566777 89 99999999875 355699999999986532 111111 1223356789999999976
Q ss_pred cCCCCC---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCC
Q 020630 95 GRSDGI---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN 171 (323)
Q Consensus 95 G~s~~~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~ 171 (323)
+..... ...........+|+.++++.+..+.+++..+++|+||||||.+++.++.++|+. +++++++++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~sg~~~---- 299 (380)
T 3doh_A 225 SSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPEL-FAAAIPICGGGD---- 299 (380)
T ss_dssp CCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCC----
T ss_pred CcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCcc-ceEEEEecCCCC----
Confidence 543221 111112345567777777777777655566899999999999999999999998 999999998641
Q ss_pred CchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc-ccc
Q 020630 172 MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVP 250 (323)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P 250 (323)
...+..+ .+|
T Consensus 300 ---------------------------------------------------------------------~~~~~~~~~~P 310 (380)
T 3doh_A 300 ---------------------------------------------------------------------VSKVERIKDIP 310 (380)
T ss_dssp ---------------------------------------------------------------------GGGGGGGTTSC
T ss_pred ---------------------------------------------------------------------hhhhhhccCCC
Confidence 0112233 389
Q ss_pred EEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCC--------CccccccCCchhHHHHHH--HHHHHHHHH
Q 020630 251 FLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGM--------YHSLIQGEPDENANLVLK--DMREWIDER 314 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------gH~~~~~~~~~~~~~~~~--~i~~fl~~~ 314 (323)
+|+++|++|..+|++.++.+.+.+. +.++++.+++++ +|... ..... .+.+||.++
T Consensus 311 ~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~--------~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 311 IWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSW--------IPTYENQEAIEWLFEQ 378 (380)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTH--------HHHHTCHHHHHHHHTC
T ss_pred EEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhH--------HHhcCCHHHHHHHHhh
Confidence 9999999999999999999988874 345789999999 56433 33344 788998753
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=179.46 Aligned_cols=251 Identities=10% Similarity=0.013 Sum_probs=162.8
Q ss_pred CccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCC--
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-- 100 (323)
+..+...+++.|| +|.+..+.|.+ .++.|+||++||.++... ..|......|+++||.|+++|+||+|.+...
T Consensus 478 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~ 557 (751)
T 2xe4_A 478 YKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWY 557 (751)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHH
T ss_pred eEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchh
Confidence 3456778888999 99988887754 245799999999876432 2354456678889999999999999976421
Q ss_pred --CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 101 --RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 101 --~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
...........+|+.++++++..+...+..+++++|+|+||.+++.++.++|++ ++++|+.+|..++..
T Consensus 558 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~-~~a~v~~~~~~d~~~-------- 628 (751)
T 2xe4_A 558 EIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDL-FKVALAGVPFVDVMT-------- 628 (751)
T ss_dssp HTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCHHH--------
T ss_pred hccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchh-eeEEEEeCCcchHHh--------
Confidence 111111234567888888888776545577999999999999999999999998 999999988754210
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc-EEEEeeC
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVHGT 257 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~ 257 (323)
.+. ....+ +. .... ..+ +.+........+... .....+.++++| +|+++|+
T Consensus 629 -~~~---~~~~~---------~~---------~~~~----~~~-g~p~~~~~~~~~~~~-sp~~~~~~~~~Pp~Lii~G~ 680 (751)
T 2xe4_A 629 -TMC---DPSIP---------LT---------TGEW----EEW-GNPNEYKYYDYMLSY-SPMDNVRAQEYPNIMVQCGL 680 (751)
T ss_dssp -HHT---CTTST---------TH---------HHHT----TTT-CCTTSHHHHHHHHHH-CTGGGCCSSCCCEEEEEEET
T ss_pred -hhc---ccCcc---------cc---------hhhH----HHc-CCCCCHHHHHHHHhc-ChhhhhccCCCCceeEEeeC
Confidence 000 00000 00 0000 000 000000000001100 012445667887 9999999
Q ss_pred CCcccCchhHHHHHHHhcCC-----CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 258 ADGVTCPTSSKLLYEKASSA-----DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|..+|+..+..+++.+... .+.+.+++++||.+.... .........+.+||.++++.
T Consensus 681 ~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 681 HDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDR--YKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp TCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSH--HHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCCh--hHHHHHHHHHHHHHHHHhCC
Confidence 99999999999998887422 123444599999987321 12334566799999998754
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-22 Score=172.21 Aligned_cols=263 Identities=13% Similarity=0.073 Sum_probs=160.7
Q ss_pred ecCCC-c--EEEEEecCCCCCCceEEEEecCCCCCcch------------------------------------------
Q 020630 36 ETPNG-K--LFTQSFLPLDQKVKATVYMTHGYGSDTGW------------------------------------------ 70 (323)
Q Consensus 36 ~~~~g-~--l~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------------------------------------ 70 (323)
+..|| + |.+.+|.|.+.++-|+||..||++.....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 258 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPIV 258 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEE
T ss_pred cCCCCCeeeEEEEEEecCCCCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccccccc
Confidence 46799 8 99999999875566999999998753110
Q ss_pred -----hh-----HHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhh--------------CC
Q 020630 71 -----MF-----QKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS--------------EP 126 (323)
Q Consensus 71 -----~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~--------------~~ 126 (323)
.| ..+...|+++||.|+++|+||+|.|.+.... .. ...++|+.++++++..+ .+
T Consensus 259 ~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~-~~-~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~ 336 (763)
T 1lns_A 259 DKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTS-GD-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 336 (763)
T ss_dssp SSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCT-TS-HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCT
T ss_pred ccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCC-CC-HHHHHHHHHHHHHHhhccccccccccccccccc
Confidence 01 1245788899999999999999999876432 23 35689999999999842 12
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc-cccccccccCCCc----ccc
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-FGLADTWAAMPDN----KMV 201 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~ 201 (323)
++..+|.++||||||.+++.+|..+|+. ++++|..++..+... ...... ......+...... ...
T Consensus 337 ~~~grVgl~G~SyGG~ial~~Aa~~p~~-lkaiV~~~~~~d~~~---------~~~~~g~~~~~~g~~~~~~~~l~~~~~ 406 (763)
T 1lns_A 337 WANGKVAMTGKSYLGTMAYGAATTGVEG-LELILAEAGISSWYN---------YYRENGLVRSPGGFPGEDLDVLAALTY 406 (763)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBHHH---------HHBSSSSBCCCTTCTTCCHHHHHHHHC
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcc-cEEEEEecccccHHH---------HhhhcchhhhcccCCchhhhHHhHHHH
Confidence 3345899999999999999999999988 999999988653110 000000 0000000000000 000
Q ss_pred cccccC-------hhhHHHhhcCCc-ccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHH
Q 020630 202 GKAIKD-------PEKLKVIASNPR-RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 202 ~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
...... ............ ......... .+... ......+.+|++|+|+++|..|..+++..+..+++.
T Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~w~~-~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~a 482 (763)
T 1lns_A 407 SRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYN---QFWHD-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKA 482 (763)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCC---HHHHT-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHH
T ss_pred hhhcCcchhhhHHHHHHHHHHHHHhhhhhccCchh---HHhhc-cChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHh
Confidence 000000 000000000000 000000000 01110 012356778999999999999999999999999999
Q ss_pred hcCCCCcEEEecCCCcccccc-CCchhHHHHHHHHHHHHHHHHhhc
Q 020630 274 ASSADKSIKIYDGMYHSLIQG-EPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+........++.++||....+ .+ ..+.+.+.+||+++++..
T Consensus 483 l~~~~~~~l~i~~~gH~~~~~~~~----~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 483 LPEGHAKHAFLHRGAHIYMNSWQS----IDFSETINAYFVAKLLDR 524 (763)
T ss_dssp SCTTCCEEEEEESCSSCCCTTBSS----CCHHHHHHHHHHHHHTTC
T ss_pred hccCCCeEEEEeCCcccCccccch----HHHHHHHHHHHHHHhcCC
Confidence 853112334556789997643 22 236788999999998653
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=152.07 Aligned_cols=195 Identities=16% Similarity=0.147 Sum_probs=138.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCC---cEEEEeccccCcCCC--CCC------C----------CCC-ChHHHHh
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWG---YAVFAADLLGHGRSD--GIR------C----------YLG-DMEKVAA 112 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g---~~vi~~d~~G~G~s~--~~~------~----------~~~-~~~~~~~ 112 (323)
.++|||+||++++.. .|..+++.|.++| ++|+.+|.+++|.+. +.. . ..+ +++..++
T Consensus 4 ~~pvv~iHG~~~~~~-~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 4 MAPVIMVPGSSASQN-RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCCEEEECCCGGGHH-HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 568999999999877 8999999999876 789988888877631 110 0 001 5678899
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-----CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
++.++++.+...++ ..+++++||||||.+++.++..+ +++ |+++|+++++........
T Consensus 83 ~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~-v~~lv~l~~p~~g~~~~~-------------- 145 (250)
T 3lp5_A 83 WLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVH-IDRLMTIASPYNMESTST-------------- 145 (250)
T ss_dssp HHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCE-EEEEEEESCCTTTTCCCS--------------
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchh-hCEEEEECCCCCcccccc--------------
Confidence 99999999987765 56899999999999999999887 556 999999998765332100
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC----CCcccC
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT----ADGVTC 263 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~----~D~~~~ 263 (323)
.... ..+..+.. ....+.+ ++|+++|+|+ .|.+||
T Consensus 146 ----------------~~~~--------------------~~~~~l~~----~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp 184 (250)
T 3lp5_A 146 ----------------TAKT--------------------SMFKELYR----YRTGLPE-SLTVYSIAGTENYTSDGTVP 184 (250)
T ss_dssp ----------------SCCC--------------------HHHHHHHH----TGGGSCT-TCEEEEEECCCCCCTTTBCC
T ss_pred ----------------cccC--------------------HHHHHHHh----ccccCCC-CceEEEEEecCCCCCCceee
Confidence 0000 01111111 1233443 7999999999 899999
Q ss_pred chhHHHHHHHhcCCCCc--EEEe--cCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKASSADKS--IKIY--DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~--~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.++.+...++..... .+.+ ++++|..+.+ .. ++.+.|.+||.+
T Consensus 185 ~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e----~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 185 YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQ----NK-QIVSLIRQYLLA 233 (250)
T ss_dssp HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHH----HH-HHHHHHHHHTSC
T ss_pred HHHHHHHHHHhcccccceEEEEEeCCCCchhcchh----CH-HHHHHHHHHHhc
Confidence 99988877777422122 2334 3577999943 33 689999999864
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-22 Score=156.80 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=93.5
Q ss_pred cCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhh-HHHHHHHhcCCcEEEEeccc------------cC--cCCCC
Q 020630 37 TPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMF-QKICISYATWGYAVFAADLL------------GH--GRSDG 99 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~g~~vi~~d~~------------G~--G~s~~ 99 (323)
..+| ++.++.+.|.+ ..+.|+||++||++++.. .| ..+.+.+.++||.|+++|+| |+ |.|..
T Consensus 34 ~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~ 112 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGA-DYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGN 112 (304)
T ss_dssp -CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHH-HHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSC
T ss_pred CCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCC
Confidence 4667 99999888875 346799999999998876 45 67788888889999999999 55 66643
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
... ......+++.++++++.....++..+++|+||||||.+++.++..+|+..++++|+.++.
T Consensus 113 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 113 PRH---VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp BCC---GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred CCc---ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 311 111222456677777766544557799999999999999999999995338999977643
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=168.72 Aligned_cols=189 Identities=13% Similarity=0.183 Sum_probs=133.6
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC---------------------CC------CC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR---------------------CY------LG 105 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~---------------------~~------~~ 105 (323)
++.|+|||+||++++.. .|..+++.|+++||.|+++|+||+|.|.... .. ..
T Consensus 96 ~~~P~Vv~~HG~~~~~~-~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFRT-LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp SCEEEEEEECCTTCCTT-TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCch-HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 45799999999998876 7889999999999999999999998874210 00 00
Q ss_pred ChHHHHhhHHHHHHHHHh--------------------hCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 106 DMEKVAASSLSFFKHVRH--------------------SEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~--------------------~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
.++..++|+..+++++.. ...++..+++++|||+||.+++.++...+. |+++|++++.
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~--v~a~v~~~~~ 252 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQR--FRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCCC--ccEEEEeCCc
Confidence 122335788888888754 222234589999999999999999887664 9999999874
Q ss_pred cCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCC
Q 020630 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
..... .+.+.
T Consensus 253 ~~p~~----------------------------------------------------------------------~~~~~ 262 (383)
T 3d59_A 253 MFPLG----------------------------------------------------------------------DEVYS 262 (383)
T ss_dssp CTTCC----------------------------------------------------------------------GGGGG
T ss_pred cCCCc----------------------------------------------------------------------hhhhc
Confidence 32000 01124
Q ss_pred cccccEEEEeeCCCcccCchhHHHHHHHh--cCCCCcEEEecCCCcccccc-------------------CCchhHHHHH
Q 020630 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQG-------------------EPDENANLVL 304 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~-------------------~~~~~~~~~~ 304 (323)
++++|+|+++|++|..+ .....+ +.+ ....++++++++++|..+.+ ++.+..+.+.
T Consensus 263 ~i~~P~Lii~g~~D~~~--~~~~~~-~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (383)
T 3d59_A 263 RIPQPLFFINSEYFQYP--ANIIKM-KKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSN 339 (383)
T ss_dssp SCCSCEEEEEETTTCCH--HHHHHH-HTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHH
T ss_pred cCCCCEEEEecccccch--hhHHHH-HHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHH
Confidence 56789999999999754 223333 333 23467899999999997532 2333445566
Q ss_pred HHHHHHHHHHHhh
Q 020630 305 KDMREWIDERVER 317 (323)
Q Consensus 305 ~~i~~fl~~~~~~ 317 (323)
+.+.+||+++++.
T Consensus 340 ~~~~~Fl~~~L~~ 352 (383)
T 3d59_A 340 KASLAFLQKHLGL 352 (383)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 7899999999864
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=155.36 Aligned_cols=196 Identities=13% Similarity=0.097 Sum_probs=126.0
Q ss_pred CceEEEEecCCCCCcchhhH----HHHHHHhcCCcEEEEeccc---------------------cCcCCCCCC-----CC
Q 020630 54 VKATVYMTHGYGSDTGWMFQ----KICISYATWGYAVFAADLL---------------------GHGRSDGIR-----CY 103 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~----~~~~~l~~~g~~vi~~d~~---------------------G~G~s~~~~-----~~ 103 (323)
.+|+|||+||++++.. .|. .+.+.|.+.||+|+++|+| |+|.+.... ..
T Consensus 4 ~~~~vl~lHG~g~~~~-~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK-VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCHH-HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccHH-HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 4689999999999876 554 5777787779999999999 444432110 00
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC------CCCeeEEEEccCccCCCCCCchhHH
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE------PNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~~v~~~il~~~~~~~~~~~~~~~~ 177 (323)
..++.+.++.+.+.++. . ..+++|+||||||.+|+.+|.+++ .. ++.++++++........
T Consensus 83 ~~d~~~~~~~l~~~~~~---~----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~----- 149 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKA---N----GPYDGIVGLSQGAALSSIITNKISELVPDHPQ-FKVSVVISGYSFTEPDP----- 149 (243)
T ss_dssp GCCCHHHHHHHHHHHHH---H----CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCC-CSEEEEESCCCCEEECT-----
T ss_pred hhhHHHHHHHHHHHHHh---c----CCeeEEEEeChHHHHHHHHHHHHhhcccCCCC-ceEEEEecCCCCCCccc-----
Confidence 12455555555554443 2 237899999999999999998752 23 77777776653211000
Q ss_pred HHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC
Q 020630 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
.. .....+ ... +.. ....+.++++|+++++|+
T Consensus 150 ---------~~-------~~~~~~----~~~------------~~~----------------~~~~~~~~~~P~l~i~G~ 181 (243)
T 1ycd_A 150 ---------EH-------PGELRI----TEK------------FRD----------------SFAVKPDMKTKMIFIYGA 181 (243)
T ss_dssp ---------TS-------TTCEEE----CGG------------GTT----------------TTCCCTTCCCEEEEEEET
T ss_pred ---------cc-------cccccc----chh------------HHH----------------hccCcccCCCCEEEEEeC
Confidence 00 000000 000 000 012345678999999999
Q ss_pred CCcccCchhHHHHHHHhcCC-----CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 258 ADGVTCPTSSKLLYEKASSA-----DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|.++|++.++.+.+.+... .....+++++||.+..+ +.+.+.+.+||++.+..
T Consensus 182 ~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~------~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 182 SDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK------KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp TCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC------HHHHHHHHHHHHHHHC-
T ss_pred CCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch------HHHHHHHHHHHHHhhhh
Confidence 99999999999998887321 13556777889987632 34889999999987643
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=157.01 Aligned_cols=224 Identities=10% Similarity=0.075 Sum_probs=139.4
Q ss_pred ecCCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhH---HHHHHHhcCCcEEEEeccccCc--------------
Q 020630 36 ETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ---KICISYATWGYAVFAADLLGHG-------------- 95 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G-------------- 95 (323)
....| .+.+.+|.|.+ .++.|+||++||++++.. .|. .+...+.+.|+.|+++|.+++|
T Consensus 29 s~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g 107 (283)
T 4b6g_A 29 AQTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQ-NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQS 107 (283)
T ss_dssp ETTTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSH-HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTT
T ss_pred chhhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEEeccccccccccccccccccCC
Confidence 44557 89999999876 466799999999998765 443 2455666779999999986433
Q ss_pred CCCCCCC------CCCC-hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 96 RSDGIRC------YLGD-MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 96 ~s~~~~~------~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
.+..... .... .+.+++++..+++..... ..+++|+||||||.+|+.++.++|+. ++++++++|....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~G~S~GG~~a~~~a~~~p~~-~~~~~~~s~~~~~ 182 (283)
T 4b6g_A 108 AGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPT----NGKRSIMGHSMGGHGALVLALRNQER-YQSVSAFSPILSP 182 (283)
T ss_dssp BCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCE----EEEEEEEEETHHHHHHHHHHHHHGGG-CSCEEEESCCCCG
T ss_pred CcccccCccCcccchhhHHHHHHHHHHHHHHHhCCC----CCCeEEEEEChhHHHHHHHHHhCCcc-ceeEEEECCcccc
Confidence 3211100 0011 333356676766655322 34899999999999999999999998 9999999987653
Q ss_pred CCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccc
Q 020630 169 PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT 248 (323)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (323)
... .+....+...+.. ....+.. ..... ....+. ..
T Consensus 183 ~~~---~~~~~~~~~~~g~-----------------------------~~~~~~~----~~~~~-------~~~~~~-~~ 218 (283)
T 4b6g_A 183 SLV---PWGEKAFTAYLGK-----------------------------DREKWQQ----YDANS-------LIQQGY-KV 218 (283)
T ss_dssp GGS---HHHHHHHHHHHCS-----------------------------CGGGGGG----GCHHH-------HHHHTC-CC
T ss_pred ccC---cchhhhHHhhcCC-----------------------------chHHHHh----cCHHH-------HHHhcc-cC
Confidence 211 1111111000000 0000000 00000 011111 34
Q ss_pred ccEEEEeeCCCcccCch-hHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 249 VPFLTVHGTADGVTCPT-SSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+|+++++|+.|.+++.. .++.+.+.+. +.++++.++++++|.+. ........+.+|+.+.+
T Consensus 219 ~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 219 QGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYY------FIASFIGEHIAYHAAFL 282 (283)
T ss_dssp SCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHH------HHHHHHHHHHHHHHTTC
T ss_pred CCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHh------HHHHHHHHHHHHHHHhc
Confidence 69999999999998862 2555555542 35689999999999875 34556677778887653
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-21 Score=149.27 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=137.8
Q ss_pred eeEEec-CCC-cEEEEEecCCC---CCCceEEEEecCCCCCcc-h-----hhHHHHHHHhcC----CcEEEEeccccCcC
Q 020630 32 KEYFET-PNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-----MFQKICISYATW----GYAVFAADLLGHGR 96 (323)
Q Consensus 32 ~~~~~~-~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~-----~~~~~~~~l~~~----g~~vi~~d~~G~G~ 96 (323)
...+.+ .+| .+.+.+|.|.+ .++.|+||++||++++.. | .+..+++.|.++ ||.|+.+|+++++.
T Consensus 34 ~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~ 113 (268)
T 1jjf_A 34 NISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGP 113 (268)
T ss_dssp EEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCT
T ss_pred EEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCc
Confidence 444444 356 89999998875 356799999999987643 1 123457777765 59999999999875
Q ss_pred CCCCCCCCCChHHHHhh-HHHHHHHHHhhCCC--CCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc
Q 020630 97 SDGIRCYLGDMEKVAAS-SLSFFKHVRHSEPY--RDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 97 s~~~~~~~~~~~~~~~d-~~~~i~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~ 173 (323)
+... ......++ +.++++++...... +..+++|+||||||.+++.++.++|+. +++++++++.......
T Consensus 114 ~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~s~~~~~~~~-- 185 (268)
T 1jjf_A 114 GIAD-----GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDK-FAYIGPISAAPNTYPN-- 185 (268)
T ss_dssp TCSC-----HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTT-CSEEEEESCCTTSCCH--
T ss_pred cccc-----cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchh-hhheEEeCCCCCCCch--
Confidence 4211 23333333 34455555544432 356899999999999999999999998 9999999986532110
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCccccc-EE
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FL 252 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l 252 (323)
. ..+.... . ......| ++
T Consensus 186 -----~-----------------------~~~~~~~----------------------------~-----~~~~~~pp~l 204 (268)
T 1jjf_A 186 -----E-----------------------RLFPDGG----------------------------K-----AAREKLKLLF 204 (268)
T ss_dssp -----H-----------------------HHCTTTT----------------------------H-----HHHHHCSEEE
T ss_pred -----h-----------------------hhcCcch----------------------------h-----hhhhcCceEE
Confidence 0 0000000 0 0012344 99
Q ss_pred EEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 253 TVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++|++|.+++. .+.+.+.+. +.++++.++++++|.+. ........+.+||.+..
T Consensus 205 i~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~~~~l~~~~ 261 (268)
T 1jjf_A 205 IACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN------VWKPGLWNFLQMADEAG 261 (268)
T ss_dssp EEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH------HHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCCccH--HHHHHHHHHHCCCceEEEEcCCCCcCHh------HHHHHHHHHHHHHHhcC
Confidence 999999999874 455555552 34678999999999875 23445677888988763
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=157.34 Aligned_cols=279 Identities=15% Similarity=0.108 Sum_probs=153.7
Q ss_pred CCccceeEEecCC--C---cEEEEEecCCCC-CCceEEEEecCCCCCcc-------hhhHHHHHHHh-cCCcEEEEeccc
Q 020630 27 GVRNGKEYFETPN--G---KLFTQSFLPLDQ-KVKATVYMTHGYGSDTG-------WMFQKICISYA-TWGYAVFAADLL 92 (323)
Q Consensus 27 ~~~~~~~~~~~~~--g---~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~-------~~~~~~~~~l~-~~g~~vi~~d~~ 92 (323)
++...+..+.+.| | .+...++.|.+. ++.|+|++.||...... .....++..|+ ++||+|+++|+|
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~r 119 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYL 119 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSCSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCC
Confidence 3333445555444 5 467788888764 56799999999875321 00123455677 899999999999
Q ss_pred cCcCCCCCCCCCCChHHHHhhHHHHHHH---HHhhCCC-CCCCEEEEEechhHHHHHHHHhhcC----CCCeeEEEEccC
Q 020630 93 GHGRSDGIRCYLGDMEKVAASSLSFFKH---VRHSEPY-RDLPAFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAP 164 (323)
Q Consensus 93 G~G~s~~~~~~~~~~~~~~~d~~~~i~~---l~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~il~~~ 164 (323)
|+|.|.+.............++.+.++. +....++ +..+++++||||||.+++.+|..+| +..+.+++..++
T Consensus 120 G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~ 199 (377)
T 4ezi_A 120 GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSA 199 (377)
T ss_dssp TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESC
T ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCc
Confidence 9999986322111222223333332222 2111111 1458999999999999999988753 434889999888
Q ss_pred ccCCCCCCchh---------HHHHHHhhcccccccccccCCCcccccccccChhhHHHhhc-------------CCcccC
Q 020630 165 LFVIPENMKPS---------KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS-------------NPRRYT 222 (323)
Q Consensus 165 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 222 (323)
+.++....... .........+..+...++ .+...+........... ......
T Consensus 200 p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (377)
T 4ezi_A 200 PYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWS------GFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPL 273 (377)
T ss_dssp CCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSS------CHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGG
T ss_pred ccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhcc------CHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHH
Confidence 77643211000 000011111111111111 11111111111111000 000000
Q ss_pred CCCCchhHHH--------HHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecC--CCcc
Q 020630 223 GKPRVGTMRE--------IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDG--MYHS 290 (323)
Q Consensus 223 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~gH~ 290 (323)
.......... +.....+..-.-..+++|+++++|++|.++|.+.++.+.+.+. +. ++++.+++ .+|.
T Consensus 274 ~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~ 352 (377)
T 4ezi_A 274 LIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHV 352 (377)
T ss_dssp GGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTT
T ss_pred HHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCcc
Confidence 0000000001 1111111111223668999999999999999999999998874 34 78999999 7887
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHhhcC
Q 020630 291 LIQGEPDENANLVLKDMREWIDERVERCG 319 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 319 (323)
.. .......+.+||++......
T Consensus 353 ~~-------~~~~~~~~~~wl~~~~~~~~ 374 (377)
T 4ezi_A 353 QA-------HPFVLKEQVDFFKQFERQEA 374 (377)
T ss_dssp TT-------HHHHHHHHHHHHHHHHTSSC
T ss_pred Ch-------HHHHHHHHHHHHHHhhcchh
Confidence 65 24467888999999876543
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-21 Score=166.42 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=108.6
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc---c---hhhHH-HH---HHHhcCCcEEEEeccccCc
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT---G---WMFQK-IC---ISYATWGYAVFAADLLGHG 95 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~---~---~~~~~-~~---~~l~~~g~~vi~~d~~G~G 95 (323)
.+..+...++..|| +|++..+.|.+.++.|+||++||++.+. . ..|.. +. +.|+++||.|+.+|+||+|
T Consensus 22 ~~~~~~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g 101 (615)
T 1mpx_A 22 DYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKY 101 (615)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred CCEEEEEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCC
Confidence 33445677889999 9999999987644578999999988642 1 12322 33 7788999999999999999
Q ss_pred CCCCCCCCCCC----hH----HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 96 RSDGIRCYLGD----ME----KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 96 ~s~~~~~~~~~----~~----~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.|.+....... +. ..++|+.++++++..+.+....++.++||||||.+++.+|..+++. ++++|.+++..+
T Consensus 102 ~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~-l~a~v~~~~~~d 180 (615)
T 1mpx_A 102 GSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA-LKVAVPESPMID 180 (615)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT-EEEEEEESCCCC
T ss_pred CCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCc-eEEEEecCCccc
Confidence 99865432100 12 5678999999999877332245899999999999999999888888 999999999887
Q ss_pred C
Q 020630 168 I 168 (323)
Q Consensus 168 ~ 168 (323)
.
T Consensus 181 ~ 181 (615)
T 1mpx_A 181 G 181 (615)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.5e-22 Score=150.31 Aligned_cols=196 Identities=18% Similarity=0.168 Sum_probs=135.8
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEeccccC---------cCCC-----CCC---
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLLGH---------GRSD-----GIR--- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~---------G~s~-----~~~--- 101 (323)
.+.|....|.. +.+++|||+||+|++.. .|..+++.|... ++.+++++-+-. |.+. ...
T Consensus 24 ~l~y~ii~P~~-~~~~~VI~LHG~G~~~~-dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~ 101 (246)
T 4f21_A 24 AMNYELMEPAK-QARFCVIWLHGLGADGH-DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSL 101 (246)
T ss_dssp CCCEEEECCSS-CCCEEEEEEEC--CCCC-CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CG
T ss_pred CcCceEeCCCC-cCCeEEEEEcCCCCCHH-HHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccch
Confidence 67788888875 67889999999998876 666677766532 678888875421 1110 000
Q ss_pred ---CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 102 ---CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 102 ---~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
.....+...++.+..+++.... .+++..+++++|+|+||.+++.++.++|+. +.+++.+++.......
T Consensus 102 ~~~~d~~~i~~~~~~i~~li~~~~~-~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~-~a~~i~~sG~lp~~~~------- 172 (246)
T 4f21_A 102 NRVVDVEGINSSIAKVNKLIDSQVN-QGIASENIILAGFSQGGIIATYTAITSQRK-LGGIMALSTYLPAWDN------- 172 (246)
T ss_dssp GGGSCCC-CHHHHHHHHHHHHHHHH-C-CCGGGEEEEEETTTTHHHHHHHTTCSSC-CCEEEEESCCCTTHHH-------
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHH-cCCChhcEEEEEeCchHHHHHHHHHhCccc-cccceehhhccCcccc-------
Confidence 0111345556666777765543 355678999999999999999999999998 9999999875421100
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcC--CcccccEEEEee
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF--SKVTVPFLTVHG 256 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g 256 (323)
..... ...++|++++||
T Consensus 173 -------------------------------------------------------------~~~~~~~~~~~~Pvl~~HG 191 (246)
T 4f21_A 173 -------------------------------------------------------------FKGKITSINKGLPILVCHG 191 (246)
T ss_dssp -------------------------------------------------------------HSTTCCGGGTTCCEEEEEE
T ss_pred -------------------------------------------------------------ccccccccccCCchhhccc
Confidence 00000 112579999999
Q ss_pred CCCcccCchhHHHHHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 257 TADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|++||.+.++...+.+.. .++++..+++.||... . +..+.+.+||+++++
T Consensus 192 ~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~----~----~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 192 TDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC----M----EEIKDISNFIAKTFK 245 (246)
T ss_dssp TTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC----H----HHHHHHHHHHHHHTT
T ss_pred CCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC----H----HHHHHHHHHHHHHhC
Confidence 99999999999988888742 3568889999999876 2 245779999998864
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=149.84 Aligned_cols=206 Identities=13% Similarity=0.071 Sum_probs=136.1
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCc---EEEEeccccCc------CCC----CC------CCCCCChHHHHhhHH
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGY---AVFAADLLGHG------RSD----GI------RCYLGDMEKVAASSL 115 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~---~vi~~d~~G~G------~s~----~~------~~~~~~~~~~~~d~~ 115 (323)
+++|||+||++++.. .|..+++.|.++++ .++.++..+.| .+. .+ .....+++.+++++.
T Consensus 3 ~~pvvllHG~~~~~~-~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 3 QIPIILIHGSGGNAS-SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCEEEECCTTCCTT-TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCcc-hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 578999999999877 89999999998743 34444443333 121 11 012348899999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC-----CCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc
Q 020630 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP-----NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 116 ~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
++++.+....+ ..+++++||||||.+++.++.++|+ + |+++|+++++........ . ..
T Consensus 82 ~~i~~l~~~~~--~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~-v~~lv~i~~p~~g~~~~~------~----~~---- 144 (254)
T 3ds8_A 82 IAMEDLKSRYG--FTQMDGVGHSNGGLALTYYAEDYAGDKTVPT-LRKLVAIGSPFNDLDPND------N----GM---- 144 (254)
T ss_dssp HHHHHHHHHHC--CSEEEEEEETHHHHHHHHHHHHSTTCTTSCE-EEEEEEESCCTTCSCHHH------H----CS----
T ss_pred HHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHccCCccccc-eeeEEEEcCCcCcccccc------c----cc----
Confidence 98888877654 4589999999999999999999987 6 999999998765331100 0 00
Q ss_pred ccccCCCcccccccccChhhHHHhhcCCcccCCCCC-chhHHHHHHhhHHHHhcCCcccccEEEEeeC------CCcccC
Q 020630 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR-VGTMREIARVCQYIQDNFSKVTVPFLTVHGT------ADGVTC 263 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~ 263 (323)
... ....+. ...+..+. .....+.+ ++|++.|+|+ .|.+||
T Consensus 145 ~~~---------------------------~~~~p~~~~~~~~~~----~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp 192 (254)
T 3ds8_A 145 DLS---------------------------FKKLPNSTPQMDYFI----KNQTEVSP-DLEVLAIAGELSEDNPTDGIVP 192 (254)
T ss_dssp CTT---------------------------CSSCSSCCHHHHHHH----HTGGGSCT-TCEEEEEEEESBTTBCBCSSSB
T ss_pred ccc---------------------------cccCCcchHHHHHHH----HHHhhCCC-CcEEEEEEecCCCCCCCCcEee
Confidence 000 000000 01111111 11233333 7999999999 999999
Q ss_pred chhHHHHHHHhcCC--CCcEEEecC--CCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKASSA--DKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 264 ~~~~~~~~~~~~~~--~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
...++.+...++.. ..+..++.+ ++|..+.+++ ++.+.+..||.+..
T Consensus 193 ~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~-----~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 193 TISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETP-----KSIEKTYWFLEKFK 243 (254)
T ss_dssp HHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSH-----HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCH-----HHHHHHHHHHHHhc
Confidence 99988887776421 233445555 7799985443 38888999998753
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=163.42 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=82.1
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCcch----------hhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC-
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTGW----------MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD- 106 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~----------~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~- 106 (323)
.+..+.+.|.+ .++.|+||++||++++... .|..++..|+++||.|+++|+||+|.|.........
T Consensus 62 ~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~ 141 (397)
T 3h2g_A 62 TASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHS 141 (397)
T ss_dssp EEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCH
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhh
Confidence 46777777754 3457899999999876431 155678889999999999999999998643322112
Q ss_pred ------hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh-cC----CCCeeEEEEccCccC
Q 020630 107 ------MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ-SE----PNTWTGLIFSAPLFV 167 (323)
Q Consensus 107 ------~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p----~~~v~~~il~~~~~~ 167 (323)
..+.++++..+++.+... +..+++++||||||.+++.++.. .+ ...+.+++..++..+
T Consensus 142 ~~~~~~~~d~~~~~~~~~~~~~~~---~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 142 ASEASATIDAMRAARSVLQHLKTP---LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC---EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCC---CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 223333334444443321 13489999999999999888732 22 223777777766544
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=157.84 Aligned_cols=103 Identities=13% Similarity=0.033 Sum_probs=82.0
Q ss_pred CceEEEEecCCCCCcchhhH-HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 54 VKATVYMTHGYGSDTGWMFQ-KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.+++|||+||++++....|. .+.+.|.++||+|+++|+||||.++ .+..++++.++++.+....+ ..++
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~--------~~~~~~~l~~~i~~~~~~~g--~~~v 99 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND--------TQVNTEYMVNAITALYAGSG--NNKL 99 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC--------HHHHHHHHHHHHHHHHHHTT--SCCE
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCc--------HHHHHHHHHHHHHHHHHHhC--CCCE
Confidence 46789999999988762277 8899999889999999999998763 44455666666666655432 3589
Q ss_pred EEEEechhHHHHHHHHhhcC---CCCeeEEEEccCccC
Q 020630 133 FLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFV 167 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p---~~~v~~~il~~~~~~ 167 (323)
+|+||||||.++..++..++ ++ |+++|++++...
T Consensus 100 ~lVGhS~GG~va~~~~~~~~~~~~~-v~~lV~l~~~~~ 136 (317)
T 1tca_A 100 PVLTWSQGGLVAQWGLTFFPSIRSK-VDRLMAFAPDYK 136 (317)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGTTT-EEEEEEESCCTT
T ss_pred EEEEEChhhHHHHHHHHHcCccchh-hhEEEEECCCCC
Confidence 99999999999999888765 56 999999998653
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=163.84 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=109.4
Q ss_pred ccCCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchh-------------hH----HHHHHHhcCCcE
Q 020630 25 SQGVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWM-------------FQ----KICISYATWGYA 85 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~-------------~~----~~~~~l~~~g~~ 85 (323)
..++..+...+.+.+| .+.++.+.|.+ .++.|+||++||++++.... |. .+++.|+++||.
T Consensus 82 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~ 161 (391)
T 3g8y_A 82 KEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYV 161 (391)
T ss_dssp ETTEEEEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCE
T ss_pred cCCEEEEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCE
Confidence 4556667778888899 99999999876 46689999999998764311 12 578899999999
Q ss_pred EEEeccccCcCCCCCCCCC----CChHHH---------------HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHH
Q 020630 86 VFAADLLGHGRSDGIRCYL----GDMEKV---------------AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATML 146 (323)
Q Consensus 86 vi~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
|+++|+||+|.|....... ++...+ +.|+.++++++.....++..++.++||||||.+++.
T Consensus 162 Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~ 241 (391)
T 3g8y_A 162 AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMV 241 (391)
T ss_dssp EEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHH
Confidence 9999999999997653211 233333 378889999998776556678999999999999999
Q ss_pred HHhhcCCCCeeEEEEccCccC
Q 020630 147 MYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 147 ~a~~~p~~~v~~~il~~~~~~ 167 (323)
+|...+ + |+++|++++...
T Consensus 242 ~a~~~~-~-i~a~v~~~~~~~ 260 (391)
T 3g8y_A 242 LGVLDK-D-IYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHCT-T-CCEEEEESCBCC
T ss_pred HHHcCC-c-eeEEEEccCCCC
Confidence 888755 4 999998886543
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=159.10 Aligned_cols=140 Identities=14% Similarity=0.191 Sum_probs=107.1
Q ss_pred ccCCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcch-------------hhH----HHHHHHhcCCcE
Q 020630 25 SQGVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW-------------MFQ----KICISYATWGYA 85 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~-------------~~~----~~~~~l~~~g~~ 85 (323)
..++..+...+.+.+| ++.++.+.|.+ .++.|+||++||.+++... .|. .+++.|+++||.
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~ 166 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYI 166 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCE
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCE
Confidence 4555667778888999 99999999876 4567999999999876431 111 578899999999
Q ss_pred EEEeccccCcCCCCCCCC-------------------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHH
Q 020630 86 VFAADLLGHGRSDGIRCY-------------------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATML 146 (323)
Q Consensus 86 vi~~d~~G~G~s~~~~~~-------------------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
|+++|+||+|.|...... .......+.|+.++++++.....++..++.++||||||.+++.
T Consensus 167 Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~ 246 (398)
T 3nuz_A 167 AVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMV 246 (398)
T ss_dssp EEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHH
Confidence 999999999999754310 0012234478889999998765555678999999999999999
Q ss_pred HHhhcCCCCeeEEEEccCcc
Q 020630 147 MYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 147 ~a~~~p~~~v~~~il~~~~~ 166 (323)
++...+. |+++|.+++..
T Consensus 247 ~aa~~~~--i~a~v~~~~~~ 264 (398)
T 3nuz_A 247 LGTLDTS--IYAFVYNDFLC 264 (398)
T ss_dssp HHHHCTT--CCEEEEESCBC
T ss_pred HHhcCCc--EEEEEEecccc
Confidence 8887654 89998876543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=165.06 Aligned_cols=133 Identities=14% Similarity=0.082 Sum_probs=107.4
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH---HH-HHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK---IC-ISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~-~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
++..+++.|| +|.+..|.|.+.++.|+||++||++.... .+.. .+ ..|+++||.|+++|+||+|.|.+....
T Consensus 10 ~~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~-~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~-- 86 (587)
T 3i2k_A 10 SNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP-- 86 (587)
T ss_dssp EEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCH-HHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT--
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCcc-ccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc--
Confidence 4567899999 99999999876556799999999987643 2222 23 788899999999999999999875432
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc-cCCC
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL-FVIP 169 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~-~~~~ 169 (323)
+...++|+.++++++..+. ....++.++|+||||.+++.+|..+++. ++++|++++. .+..
T Consensus 87 -~~~~~~D~~~~i~~l~~~~-~~~~~v~l~G~S~GG~~a~~~a~~~~~~-l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 87 -HVDDEADAEDTLSWILEQA-WCDGNVGMFGVSYLGVTQWQAAVSGVGG-LKAIAPSMASADLYR 148 (587)
T ss_dssp -TTTHHHHHHHHHHHHHHST-TEEEEEEECEETHHHHHHHHHHTTCCTT-EEEBCEESCCSCTCC
T ss_pred -ccchhHHHHHHHHHHHhCC-CCCCeEEEEeeCHHHHHHHHHHhhCCCc-cEEEEEeCCcccccc
Confidence 3456889999999997652 2235899999999999999999998888 9999999887 5543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=152.62 Aligned_cols=221 Identities=10% Similarity=0.016 Sum_probs=141.3
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
.+++|+|+||++++.. .|..+++.|.. +|+|+++|+||+|.+.... .+++++++++.+.+..+.. ..+++
T Consensus 100 ~~~~l~~lhg~~~~~~-~~~~l~~~L~~-~~~v~~~d~~g~~~~~~~~---~~~~~~a~~~~~~i~~~~~-----~~~~~ 169 (329)
T 3tej_A 100 NGPTLFCFHPASGFAW-QFSVLSRYLDP-QWSIIGIQSPRPNGPMQTA---ANLDEVCEAHLATLLEQQP-----HGPYY 169 (329)
T ss_dssp SSCEEEEECCTTSCCG-GGGGGGGTSCT-TCEEEEECCCTTTSHHHHC---SSHHHHHHHHHHHHHHHCS-----SSCEE
T ss_pred CCCcEEEEeCCcccch-HHHHHHHhcCC-CCeEEEeeCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCC-----CCCEE
Confidence 3789999999998865 88889888854 6999999999999875322 3789999988888877643 33899
Q ss_pred EEEechhHHHHHHHHhh---cCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhh
Q 020630 134 LFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~---~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
|+||||||.+|+.+|.+ ++++ |.+++++++...... .+.... ... ......... . ...
T Consensus 170 l~G~S~Gg~ia~~~a~~L~~~~~~-v~~lvl~d~~~~~~~----~~~~~~----~~~--------~~~~~~~~~-~-~~~ 230 (329)
T 3tej_A 170 LLGYSLGGTLAQGIAARLRARGEQ-VAFLGLLDTWPPETQ----NWQEKE----ANG--------LDPEVLAEI-N-RER 230 (329)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCCTHHH----HTC---------C--------CCCTHHHHH-H-HHH
T ss_pred EEEEccCHHHHHHHHHHHHhcCCc-ccEEEEeCCCCCCcc----cccccc----ccc--------cChhhHHHH-H-HHH
Confidence 99999999999999998 8998 999999987653210 000000 000 000000000 0 000
Q ss_pred HHHhhcCCcccCCCCCchhHHHHHH---hhHHHH--hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEec
Q 020630 211 LKVIASNPRRYTGKPRVGTMREIAR---VCQYIQ--DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (323)
.......... ........+.. ...... .....+.+|++++.|++|...+......+.+.. ++++++.++
T Consensus 231 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~--~~~~~~~v~ 304 (329)
T 3tej_A 231 EAFLAAQQGS----TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI--AELDIYRQD 304 (329)
T ss_dssp HHHHHTTCCC----SCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE--EEEEEEEES
T ss_pred HHHHHhcccc----ccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc--CCcEEEEec
Confidence 0011100000 01111111111 111111 125677999999999999888777666666665 578899998
Q ss_pred CCCccccccCCchhHHHHHHHHHHHHH
Q 020630 286 GMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+||+.+++++ ..+.+.+.|.+||.
T Consensus 305 -g~H~~~~~~~--~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 305 -CAHVDIISPG--TFEKIGPIIRATLN 328 (329)
T ss_dssp -SCGGGGGSTT--THHHHHHHHHHHHC
T ss_pred -CChHHhCCCh--HHHHHHHHHHHHhc
Confidence 6999887766 34667888888764
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-20 Score=158.72 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=106.8
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc----ch---hhHHH---H-HHHhcCCcEEEEeccccCcC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT----GW---MFQKI---C-ISYATWGYAVFAADLLGHGR 96 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~----~~---~~~~~---~-~~l~~~g~~vi~~d~~G~G~ 96 (323)
..+...+++.|| +|.+.++.|.+.++.|+||++||++... .+ .|... . +.|+++||.|+.+|+||+|.
T Consensus 36 ~~~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~ 115 (652)
T 2b9v_A 36 IKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYG 115 (652)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTT
T ss_pred EEEEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCC
Confidence 336678889999 9999999987645578999999887541 11 12221 2 77889999999999999999
Q ss_pred CCCCCCCCC----ChH----HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 97 SDGIRCYLG----DME----KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 97 s~~~~~~~~----~~~----~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
|.+...... .+. ..++|+.++++++..+.+....++.++|+|+||.+++.+|..+++. ++++|.+++..+.
T Consensus 116 S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~-lka~v~~~~~~d~ 194 (652)
T 2b9v_A 116 SQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPA-LKVAAPESPMVDG 194 (652)
T ss_dssp CCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTT-EEEEEEEEECCCT
T ss_pred CCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCc-eEEEEeccccccc
Confidence 986543210 012 5679999999999876222235899999999999999999988888 9999999988775
Q ss_pred C
Q 020630 169 P 169 (323)
Q Consensus 169 ~ 169 (323)
.
T Consensus 195 ~ 195 (652)
T 2b9v_A 195 W 195 (652)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.9e-22 Score=153.19 Aligned_cols=106 Identities=12% Similarity=0.117 Sum_probs=79.4
Q ss_pred ceEEEEecCCCCCc---chhhHHHHHHHhcC--CcEEEEeccccCcCCCCCC-CCCCChHHHHhhHHHHHHHHHhhCCCC
Q 020630 55 KATVYMTHGYGSDT---GWMFQKICISYATW--GYAVFAADLLGHGRSDGIR-CYLGDMEKVAASSLSFFKHVRHSEPYR 128 (323)
Q Consensus 55 ~~~vv~~hG~~~~~---~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~i~~l~~~~~~~ 128 (323)
.++|||+||++++. . .|..+++.|.+. |++|+++|+ |||.|.... ....++.+.++++.+.++.+...
T Consensus 5 ~~pvVllHG~~~~~~~~~-~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l---- 78 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPL-SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL---- 78 (279)
T ss_dssp SCCEEEECCTTCCSCCTT-TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG----
T ss_pred CCcEEEECCCCCCCCCcc-cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhc----
Confidence 46799999999876 4 789999999875 779999998 999875211 11124555555555555542211
Q ss_pred CCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
..+++++||||||.++..++.++|+.+|+++|+++++.
T Consensus 79 ~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 24899999999999999999999983499999988654
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-20 Score=155.01 Aligned_cols=253 Identities=17% Similarity=0.110 Sum_probs=156.9
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhH----------------------HHHHHHhcCCcEE
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ----------------------KICISYATWGYAV 86 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~----------------------~~~~~l~~~g~~v 86 (323)
.+...+++.|| +|+..+|.|.+.++.|+||+.||++.+....+. ..+..|+++||.|
T Consensus 41 ~~~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~v 120 (560)
T 3iii_A 41 EKDGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVV 120 (560)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEE
T ss_pred EEEEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEE
Confidence 35677899999 999999999865678999999999976321110 1257899999999
Q ss_pred EEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 87 FAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 87 i~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
+++|+||+|.|.+.... -.....+|+.++++++..+... ..++.++|+|+||.+++.+|...|+. ++++|..++..
T Consensus 121 v~~D~RG~G~S~G~~~~--~~~~~~~D~~~~i~~l~~~~~~-~~~igl~G~S~GG~~al~~a~~~p~~-l~aiv~~~~~~ 196 (560)
T 3iii_A 121 VKVALRGSDKSKGVLSP--WSKREAEDYYEVIEWAANQSWS-NGNIGTNGVSYLAVTQWWVASLNPPH-LKAMIPWEGLN 196 (560)
T ss_dssp EEEECTTSTTCCSCBCT--TSHHHHHHHHHHHHHHHTSTTE-EEEEEEEEETHHHHHHHHHHTTCCTT-EEEEEEESCCC
T ss_pred EEEcCCCCCCCCCcccc--CChhHHHHHHHHHHHHHhCCCC-CCcEEEEccCHHHHHHHHHHhcCCCc-eEEEEecCCcc
Confidence 99999999999876432 1246789999999999876322 36899999999999999999998888 99999999876
Q ss_pred CCCC-CCchhH-----HHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHH
Q 020630 167 VIPE-NMKPSK-----LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240 (323)
Q Consensus 167 ~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
+... ...... ....... .....+.... ...+ ....+ ...+ .... +.+. .
T Consensus 197 d~~~~~~~~gG~~~~~~~~~w~~---~~~~~~~~~~-------~~~~-~~~~~-~~hp-------~~d~---~W~~---~ 251 (560)
T 3iii_A 197 DMYREVAFHGGIPDTGFYRFWTQ---GIFARWTDNP-------NIED-LIQAQ-QEHP-------LFDD---FWKQ---R 251 (560)
T ss_dssp BHHHHTTEETTEECCSHHHHHHH---HHHHHTTTCT-------TBCC-HHHHH-HHCC-------SSCH---HHHT---T
T ss_pred cccccceecCCCCchhHHHHHHh---hhcccccccc-------chHH-HHHHH-HHCC-------Ccch---Hhhc---c
Confidence 6321 000000 0000000 0000000000 0000 00011 1110 0000 0000 1
Q ss_pred HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
...+.+|++|+|++.|-.|..+......+.++.+...+..+. +.+.+|+.. .......+...+|++..++.
T Consensus 252 ~~~~~~I~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~~k~l~-ih~~~~~~~-----~~~~~~~~~~~~wfD~~LkG 322 (560)
T 3iii_A 252 QVPLSQIKTPLLTCASWSTQGLHNRGSFEGFKQAASEEKWLY-VHGRKEWES-----YYARENLERQKSFFDFYLKE 322 (560)
T ss_dssp BCCGGGCCSCEEEEEEGGGTTTTHHHHHHHHHHCCCSSEEEE-EESSCHHHH-----HHSHHHHHHHHHHHHHHTSC
T ss_pred CCchhhCCCCEEEeCCcCCCcccchhHHHHHHhccccCcEEE-ECCCCCcCc-----ccChhHHHHHHHHHHHHhCC
Confidence 124678999999999999974444555556666643333333 333345432 11234567888999999863
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-18 Score=137.94 Aligned_cols=245 Identities=13% Similarity=0.062 Sum_probs=143.5
Q ss_pred ccceeEEecCC-C-cEEEEEecCCCCCCceEEEEecCC--CCCcchhhHH---HHHHHhcCCcEEEEeccccCc-CCCCC
Q 020630 29 RNGKEYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGY--GSDTGWMFQK---ICISYATWGYAVFAADLLGHG-RSDGI 100 (323)
Q Consensus 29 ~~~~~~~~~~~-g-~l~~~~~~~~~~~~~~~vv~~hG~--~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G-~s~~~ 100 (323)
..+...+.+.. | ++.++ +.|.. ++.|+||++||+ +++.. .|.. +.+.+.+.|+.|+++|.++.. .++..
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~~-~~~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~ 84 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSGG-ANSPALYLLDGLRAQDDFS-GWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWY 84 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS-TTBCEEEEECCTTCCSSSC-HHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCS
T ss_pred eEEEEEEECccCCCceEEE-ECCCC-CCCCEEEEeCCCCCCCCcc-hhhcCCCHHHHHhcCCeEEEEECCCCCccccccC
Confidence 33455565554 5 77776 54543 568999999999 44544 4544 346677789999999987642 22111
Q ss_pred CC-------CCCChHHH-HhhHHHHHHH-HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCC
Q 020630 101 RC-------YLGDMEKV-AASSLSFFKH-VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN 171 (323)
Q Consensus 101 ~~-------~~~~~~~~-~~d~~~~i~~-l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~ 171 (323)
.. ....++++ ++++..+++. +.. +..+++|+|+||||.+|+.++.++|++ +++++++++.......
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~----~~~~~~l~G~S~GG~~al~~a~~~p~~-~~~~v~~sg~~~~~~~ 159 (304)
T 1sfr_A 85 QPACGKAGCQTYKWETFLTSELPGWLQANRHV----KPTGSAVVGLSMAASSALTLAIYHPQQ-FVYAGAMSGLLDPSQA 159 (304)
T ss_dssp SCEEETTEEECCBHHHHHHTHHHHHHHHHHCB----CSSSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSCTTST
T ss_pred CccccccccccccHHHHHHHHHHHHHHHHCCC----CCCceEEEEECHHHHHHHHHHHhCccc-eeEEEEECCccCcccc
Confidence 10 02355554 4677777765 332 245899999999999999999999999 9999999987654322
Q ss_pred CchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccE
Q 020630 172 MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
.... ........... + . ....+.......+...++.. . ...+..-..|+
T Consensus 160 ~~~~-~~~~~~~~~~~----~---~----~~~~~g~~~~~~~~~~~p~~--------~-----------~~~l~~~~~pi 208 (304)
T 1sfr_A 160 MGPT-LIGLAMGDAGG----Y---K----ASDMWGPKEDPAWQRNDPLL--------N-----------VGKLIANNTRV 208 (304)
T ss_dssp THHH-HHHHHHHHTTS----C---C----HHHHHCSTTSTHHHHSCTTT--------T-----------HHHHHHHTCEE
T ss_pred chhh-hhhHhhhhccc----c---c----hHHhcCCcchhhhHhcCHHH--------H-----------HHHhhhcCCeE
Confidence 1000 00000000000 0 0 00000000000011111100 0 00010014799
Q ss_pred EEEeeCCCc--------------ccCchhHHHHHHHhc--C-CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 252 LTVHGTADG--------------VTCPTSSKLLYEKAS--S-ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 252 l~i~g~~D~--------------~~~~~~~~~~~~~~~--~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|+.|. .++.+.++.+.+.+. + .++++.++++++|... .+......+.+||.+.
T Consensus 209 ~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~------~w~~~l~~~l~~l~~~ 282 (304)
T 1sfr_A 209 WVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE------YWGAQLNAMKPDLQRA 282 (304)
T ss_dssp EEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH------HHHHHHHHTHHHHHHH
T ss_pred EEEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccCHH------HHHHHHHHHHHHHHHh
Confidence 999999998 567777888887774 2 3467777766799754 3455667788999988
Q ss_pred Hhhc
Q 020630 315 VERC 318 (323)
Q Consensus 315 ~~~~ 318 (323)
+...
T Consensus 283 l~~~ 286 (304)
T 1sfr_A 283 LGAT 286 (304)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8653
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.9e-20 Score=144.78 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=135.1
Q ss_pred EEEEecC--CCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCC--CCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 57 TVYMTHG--YGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG--IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 57 ~vv~~hG--~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~--~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
+++++|| ++++.. .|..+++.|. .++.|+++|+||+|.+.. ......+++++++++.+.++.+.. ..++
T Consensus 91 ~l~~~hg~g~~~~~~-~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~ 163 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-EFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPV 163 (319)
T ss_dssp EEEEECCCCTTCSTT-TTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCE
T ss_pred cEEEeCCCCCCCcHH-HHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCE
Confidence 8999998 455544 8899999887 479999999999999721 011124899999999988887753 2379
Q ss_pred EEEEechhHHHHHHHHhhc----CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccCh
Q 020630 133 FLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
+++||||||.+|+.+|.+. ++. |++++++++...... . . ... ++..+.
T Consensus 164 ~l~G~S~GG~vA~~~A~~l~~~~g~~-v~~lvl~d~~~~~~~---~-~-~~~---~~~~l~------------------- 215 (319)
T 2hfk_A 164 VLLGHAGGALLAHELAFRLERAHGAP-PAGIVLVDPYPPGHQ---E-P-IEV---WSRQLG------------------- 215 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCC-CSEEEEESCCCTTSC---H-H-HHH---THHHHH-------------------
T ss_pred EEEEECHHHHHHHHHHHHHHHhhCCC-ceEEEEeCCCCCCch---h-H-HHH---HHHHhh-------------------
Confidence 9999999999999999886 455 999999997643221 0 0 000 000000
Q ss_pred hhHHHhhcCCcccCCCC--CchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh-HHHHHHHhcCCCCcEEEec
Q 020630 209 EKLKVIASNPRRYTGKP--RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASSADKSIKIYD 285 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 285 (323)
...... .+.... .......+..... ......+++|+++++| +|..++... ...+.+.+. .+.+++.++
T Consensus 216 --~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~-~~~~~~~v~ 286 (319)
T 2hfk_A 216 --EGLFAG---ELEPMSDARLLAMGRYARFLA--GPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWD-LPHTVADVP 286 (319)
T ss_dssp --HHHHHT---CSSCCCHHHHHHHHHHHHHHH--SCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCS-SCSEEEEES
T ss_pred --HHHHHh---hccccchHHHHHHHHHHHHHH--hCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCC-CCCEEEEeC
Confidence 000000 000000 0000001111000 1234778999999999 999988765 444443332 357889999
Q ss_pred CCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 286 GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+||+.++ .+..+.+.+.|.+||.+...
T Consensus 287 -g~H~~~~---~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 287 -GDHFTMM---RDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp -SCTTHHH---HTCHHHHHHHHHHHHHHHHC
T ss_pred -CCcHHHH---HHhHHHHHHHHHHHHHhcCC
Confidence 5999764 22457799999999987653
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=137.72 Aligned_cols=202 Identities=12% Similarity=0.023 Sum_probs=123.4
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++|+++||++++.. .|..+++.|.+ ++|+++|+||+|. .++++.+.++.+.. ..++++
T Consensus 17 ~~~l~~~hg~~~~~~-~~~~~~~~l~~--~~v~~~d~~g~~~-------------~~~~~~~~i~~~~~-----~~~~~l 75 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGL-MYQNLSSRLPS--YKLCAFDFIEEED-------------RLDRYADLIQKLQP-----EGPLTL 75 (230)
T ss_dssp SEEEEEECCTTCCGG-GGHHHHHHCTT--EEEEEECCCCSTT-------------HHHHHHHHHHHHCC-----SSCEEE
T ss_pred CCCEEEECCCCCchH-HHHHHHHhcCC--CeEEEecCCCHHH-------------HHHHHHHHHHHhCC-----CCCeEE
Confidence 689999999998876 89999998864 9999999998763 34566666766643 237999
Q ss_pred EEechhHHHHHHHHhhcC---CCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 135 FGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p---~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
+||||||.+|+.+|.+.+ .. +++++++++........ +........+ .
T Consensus 76 ~G~S~Gg~ia~~~a~~~~~~~~~-v~~lvl~~~~~~~~~~~---~~~~~~~~~~-------------------------~ 126 (230)
T 1jmk_C 76 FGYSAGCSLAFEAAKKLEGQGRI-VQRIIMVDSYKKQGVSD---LDGRTVESDV-------------------------E 126 (230)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCEECCCC-----------CCH-------------------------H
T ss_pred EEECHhHHHHHHHHHHHHHcCCC-ccEEEEECCCCCCcccc---cccccHHHHH-------------------------H
Confidence 999999999999998754 55 99999998765422110 0000000000 0
Q ss_pred HHhhcCCcccC-CCCCc-hhHHHHHHhhHHHH---hcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecC
Q 020630 212 KVIASNPRRYT-GKPRV-GTMREIARVCQYIQ---DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 212 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
........... ..... ..+.........+. .....+++|+++++|++|..++ .....+.+.. ..+++++.+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~-~~~~~~~~i~g 204 (230)
T 1jmk_C 127 ALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP-EWLASWEEAT-TGAYRMKRGFG 204 (230)
T ss_dssp HHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGB-SSCEEEEECSS
T ss_pred HHHhcChhhhhhhhHHHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc-cccchHHHhc-CCCeEEEEecC
Confidence 00000000000 00000 00000000111111 3457889999999999999887 3333333333 24578999997
Q ss_pred CCc--cccccCCchhHHHHHHHHHHHHHH
Q 020630 287 MYH--SLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 287 ~gH--~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
|| ++. .+..+.+.+.|.+||.+
T Consensus 205 -~H~~~~~----~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 205 -THAEMLQ----GETLDRNAGILLEFLNT 228 (230)
T ss_dssp -CGGGTTS----HHHHHHHHHHHHHHHTC
T ss_pred -ChHHHcC----cHhHHHHHHHHHHHHhh
Confidence 99 555 45667788888888753
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-19 Score=136.84 Aligned_cols=201 Identities=10% Similarity=0.011 Sum_probs=124.5
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
.+++||++||++++.. .|..+++.|.. +|+|+++|+||++ +.++++.+.++.+.. ..+++
T Consensus 21 ~~~~l~~~hg~~~~~~-~~~~~~~~l~~-~~~v~~~d~~g~~-------------~~~~~~~~~i~~~~~-----~~~~~ 80 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGI-YFKDLALQLNH-KAAVYGFHFIEED-------------SRIEQYVSRITEIQP-----EGPYV 80 (244)
T ss_dssp CSSEEEEECCTTCCGG-GGHHHHHHTTT-TSEEEEECCCCST-------------THHHHHHHHHHHHCS-----SSCEE
T ss_pred CCCCEEEECCCCCCHH-HHHHHHHHhCC-CceEEEEcCCCHH-------------HHHHHHHHHHHHhCC-----CCCEE
Confidence 3679999999998876 89999998875 6999999999863 245666677766642 23899
Q ss_pred EEEechhHHHHHHHHhhc---CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhh
Q 020630 134 LFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
++||||||.+|+.+|.+. ++. +.++|++++......... ......+.... .+..
T Consensus 81 l~GhS~Gg~va~~~a~~~~~~~~~-v~~lvl~~~~~~~~~~~~---------------------~~~~~~~~~~~-~~~~ 137 (244)
T 2cb9_A 81 LLGYSAGGNLAFEVVQAMEQKGLE-VSDFIIVDAYKKDQSITA---------------------DTENDDSAAYL-PEAV 137 (244)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCCCCSCCCC---------------------C-------CCS-CHHH
T ss_pred EEEECHhHHHHHHHHHHHHHcCCC-ccEEEEEcCCCCcccccc---------------------cccHHHHHHHh-HHHH
Confidence 999999999999999875 456 999999987643110000 00000000000 1110
Q ss_pred HHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeC--CCcccCchhHHHHHHHhcCCCCcEEEecCCC
Q 020630 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT--ADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
...+. .....+ ............+++|+++++|+ +|.+ +++....+.+.. ..++++..+++ |
T Consensus 138 ~~~~~------------~~~~~~-~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~-~~~~~~~~i~g-g 201 (244)
T 2cb9_A 138 RETVM------------QKKRCY-QEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAA-EEGYAEYTGYG-A 201 (244)
T ss_dssp HHHHT------------HHHHHH-HHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGB-SSCEEEEECSS-B
T ss_pred HHHHH------------HHHHHH-HHHHHhhccCCCcCCCEEEEEccCccccc-cccchhHHHHhc-CCCCEEEEecC-C
Confidence 00000 000000 00000012457889999999999 8873 333333333333 23578999996 9
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 289 HSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|..++. .+..+.+.+.|.+||.+..
T Consensus 202 H~~~~~--~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 202 HKDMLE--GEFAEKNANIILNILDKIN 226 (244)
T ss_dssp GGGTTS--HHHHHHHHHHHHHHHHTC-
T ss_pred hHHHcC--hHHHHHHHHHHHHHHhcCc
Confidence 943321 4567889999999997654
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-18 Score=136.10 Aligned_cols=132 Identities=12% Similarity=0.036 Sum_probs=91.4
Q ss_pred CccceeEEecC-CC-cEEEEEecCCCCCCceEEEEecCCC--CCcchhhHH---HHHHHhcCCcEEEEeccccCc-CCCC
Q 020630 28 VRNGKEYFETP-NG-KLFTQSFLPLDQKVKATVYMTHGYG--SDTGWMFQK---ICISYATWGYAVFAADLLGHG-RSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~-~g-~l~~~~~~~~~~~~~~~vv~~hG~~--~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G-~s~~ 99 (323)
...+...+.+. .| ++.+. +.|.+ .|+||++||++ ++.. .|.. +.+.+.+.|+.|+++|.++.+ .++.
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~---~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~ 83 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG---PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNW 83 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS---SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBC
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC---CCEEEEECCCCCCCChh-hhhhcccHHHHHhcCCeEEEEECCCCCCccCCC
Confidence 34456666654 56 78887 77764 47999999995 3433 4543 566777789999999997542 2111
Q ss_pred CCCCCCCh-HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 100 IRCYLGDM-EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 100 ~~~~~~~~-~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
.......+ +.+++++..+++.. .+++..+++|+|+||||.+|+.+|.++|++ +++++++++....
T Consensus 84 ~~~~~~~~~~~~~~~l~~~i~~~---~~~~~~~~~l~G~S~GG~~al~~a~~~p~~-~~~~v~~sg~~~~ 149 (280)
T 1r88_A 84 EQDGSKQWDTFLSAELPDWLAAN---RGLAPGGHAAVGAAQGGYGAMALAAFHPDR-FGFAGSMSGFLYP 149 (280)
T ss_dssp SSCTTCBHHHHHHTHHHHHHHHH---SCCCSSCEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCCCT
T ss_pred CCCCCCcHHHHHHHHHHHHHHHH---CCCCCCceEEEEECHHHHHHHHHHHhCccc-eeEEEEECCccCc
Confidence 11111134 33456777777652 222345899999999999999999999999 9999999987654
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-21 Score=157.05 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=90.7
Q ss_pred CCceEEEEecCCCCCcchhhHH-HHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQK-ICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|.+ .||+|+++|+||+|.|.... ...+.+.+++|+.++++++..+.+++..
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~-~~~~~~~~~~dl~~~i~~l~~~~g~~~~ 146 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQ-ASQNIRVVGAEVAYLVQVLSTSLNYAPE 146 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchh-hHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3478999999999887226666 7788876 68999999999999986322 1125677889999999999644333356
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+++|+||||||.+|+.+|.++|++ |+++++++|...
T Consensus 147 ~i~lvGhSlGg~vA~~~a~~~p~~-v~~iv~l~pa~p 182 (432)
T 1gpl_A 147 NVHIIGHSLGAHTAGEAGKRLNGL-VGRITGLDPAEP 182 (432)
T ss_dssp GEEEEEETHHHHHHHHHHHTTTTC-SSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccc-cceeEEeccccc
Confidence 899999999999999999999988 999999988654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-20 Score=146.06 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=79.7
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+++.|. ++|+++|+++.. ...+++++++++.+.++.+.. ..++
T Consensus 22 ~~~~~l~~~hg~~~~~~-~~~~~~~~L~---~~v~~~d~~~~~-------~~~~~~~~a~~~~~~i~~~~~-----~~~~ 85 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTT-VFHSLASRLS---IPTYGLQCTRAA-------PLDSIHSLAAYYIDCIRQVQP-----EGPY 85 (283)
T ss_dssp SSSCCEEEECCTTCCSG-GGHHHHHHCS---SCEEEECCCTTS-------CCSCHHHHHHHHHHHHTTTCC-----SSCC
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC---ceEEEEecCCCC-------CCCCHHHHHHHHHHHHHHhCC-----CCCE
Confidence 34789999999999876 8999999885 899999997421 124899999999888877643 2489
Q ss_pred EEEEechhHHHHHHHHhhc---CCCCee---EEEEccCcc
Q 020630 133 FLFGESMGGAATMLMYFQS---EPNTWT---GLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~---p~~~v~---~~il~~~~~ 166 (323)
+|+||||||.+|+.+|.+. +++ +. +++++++..
T Consensus 86 ~l~GhS~Gg~va~~~a~~~~~~~~~-v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 86 RVAGYSYGACVAFEMCSQLQAQQSP-APTHNSLFLFDGSP 124 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHTT-SCCCCEEEEESCCT
T ss_pred EEEEECHhHHHHHHHHHHHHHcCCC-CCccceEEEEcCCc
Confidence 9999999999999999865 777 88 999998754
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-19 Score=137.50 Aligned_cols=104 Identities=13% Similarity=0.029 Sum_probs=81.9
Q ss_pred CceEEEEecCCCCCcchhhH-HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 54 VKATVYMTHGYGSDTGWMFQ-KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.+++|||+||++++....|. .+.+.|.++||+|+++|+||||.+ +.+..++++.++++.+....+ .+++
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~--------~~~~~~~~la~~I~~l~~~~g--~~~v 133 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLN--------DTQVNTEYMVNAITTLYAGSG--NNKL 133 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCS--------CHHHHHHHHHHHHHHHHHHTT--SCCE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCC--------cHHHHHHHHHHHHHHHHHHhC--CCce
Confidence 46789999999988633787 899999999999999999999975 344455666666666554432 3589
Q ss_pred EEEEechhHHHHHHHHhhc---CCCCeeEEEEccCccCC
Q 020630 133 FLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~~ 168 (323)
+|+||||||.++..++..+ +++ |+++|++++....
T Consensus 134 ~LVGHSmGGlvA~~al~~~p~~~~~-V~~lV~lapp~~G 171 (316)
T 3icv_A 134 PVLTWSQGGLVAQWGLTFFPSIRSK-VDRLMAFAPDYKG 171 (316)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGTTT-EEEEEEESCCTTC
T ss_pred EEEEECHHHHHHHHHHHhccccchh-hceEEEECCCCCC
Confidence 9999999999997777765 466 9999999987653
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-18 Score=139.49 Aligned_cols=267 Identities=13% Similarity=0.067 Sum_probs=143.4
Q ss_pred EEEEEecCCCCCC-ceEEEEecCCCCCcc-----h--------------hhH-HHHHHH-hcCCcEEEEeccccCcCCCC
Q 020630 42 LFTQSFLPLDQKV-KATVYMTHGYGSDTG-----W--------------MFQ-KICISY-ATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 42 l~~~~~~~~~~~~-~~~vv~~hG~~~~~~-----~--------------~~~-~~~~~l-~~~g~~vi~~d~~G~G~s~~ 99 (323)
....++.|.+..+ .|+|.+-||..+... + .++ .+...+ .++||.|+++|++|+|.+-.
T Consensus 92 ~~gtv~~P~~~~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~ 171 (462)
T 3guu_A 92 DVATVWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFI 171 (462)
T ss_dssp EEEEEEECSSCCSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTT
T ss_pred EEEEEEecCCCCCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCccc
Confidence 5556666765333 799999999865321 0 111 345556 78899999999999996321
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHhhCCC-CCCCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCccCCCCCC--
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRHSEPY-RDLPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENM-- 172 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~~~~~~~-- 172 (323)
.-.....++.+.++......+. ...++.++|||+||..++.+|... |+..+.+++..+++.++....
T Consensus 172 ------~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl~~~~~~ 245 (462)
T 3guu_A 172 ------AGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSAKDTFTF 245 (462)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBHHHHHHH
T ss_pred ------CCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCHHHHHHH
Confidence 1111122333333332221111 145899999999999998887754 454599999999877632211
Q ss_pred -----chhHHHHHHhhcccccccccc---cCCC----cccccccccCh--hhHHHhh----cCCcccCCCCCchhHHHHH
Q 020630 173 -----KPSKLHLFMYGLLFGLADTWA---AMPD----NKMVGKAIKDP--EKLKVIA----SNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 173 -----~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~ 234 (323)
........+..+... .+... .... ...+... ... -...... .....+...........+.
T Consensus 246 ~~~~~~~g~~~~~l~Gl~~~-yP~l~~~l~~~lt~~g~~~~~~~-~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 323 (462)
T 3guu_A 246 LNGGPFAGFALAGVSGLSLA-HPDMESFIEARLNAKGQRTLKQI-RGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIA 323 (462)
T ss_dssp HTTSTTHHHHHHHHHHHHHH-CHHHHHHHHTTBCHHHHHHHHHH-TSTTCCHHHHHHHCTTCCGGGGBSCTTGGGSTTHH
T ss_pred hccchhHHHHHHHHHhHHhh-CcchhHHHHHHhCHHHHHHHHHH-HhcCcchHHHHHhhccCCHHHHcCCCccccCHHHH
Confidence 000000000000000 00000 0000 0000000 000 0000000 0000010000000001111
Q ss_pred HhhHHHHh-------cCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHH
Q 020630 235 RVCQYIQD-------NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLK 305 (323)
Q Consensus 235 ~~~~~~~~-------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 305 (323)
...++..- .-.++++|+++++|.+|.++|.+.++.+.+.+. +.+++++.+++.+|.... ..-..
T Consensus 324 ~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~-------~~~~~ 396 (462)
T 3guu_A 324 SILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAE-------IFGLV 396 (462)
T ss_dssp HHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHH-------HHTHH
T ss_pred HHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCch-------hhhHH
Confidence 11111100 124568999999999999999999999988873 346889999999999872 12367
Q ss_pred HHHHHHHHHHhhcCCCC-C
Q 020630 306 DMREWIDERVERCGPKN-C 323 (323)
Q Consensus 306 ~i~~fl~~~~~~~~~~~-~ 323 (323)
.+.+||++++....+++ |
T Consensus 397 d~l~WL~~r~~G~~~~~~C 415 (462)
T 3guu_A 397 PSLWFIKQAFDGTTPKVIC 415 (462)
T ss_dssp HHHHHHHHHHHTCCCCCCT
T ss_pred HHHHHHHHHhCCCCCCCCC
Confidence 88999999997666666 7
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-19 Score=145.09 Aligned_cols=111 Identities=16% Similarity=0.105 Sum_probs=81.5
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCc---EEEEeccccCcCC-----CCCC-CC--------------------
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGY---AVFAADLLGHGRS-----DGIR-CY-------------------- 103 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~---~vi~~d~~G~G~s-----~~~~-~~-------------------- 103 (323)
..+++|||+||++++.. .|..+++.|.++|| +|+++|++|+|.| +... +.
T Consensus 20 ~~~ppVVLlHG~g~s~~-~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG-QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 34789999999999877 89999999999999 7999999999976 1000 00
Q ss_pred --C---CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccC
Q 020630 104 --L---GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFV 167 (323)
Q Consensus 104 --~---~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~ 167 (323)
. .+....++++.+.++.+....+ ..+++++||||||.+++.++.++|+ + |+++|++++...
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~lg--~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~-V~~LVlIapp~~ 167 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAESG--ADKVDLVGHSMGTFFLVRYVNSSPERAAK-VAHLILLDGVWG 167 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHTCHHHHHT-EEEEEEESCCCS
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHHCccchhh-hCEEEEECCccc
Confidence 0 0223334444444444443322 3489999999999999999999873 6 999999998653
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-17 Score=127.99 Aligned_cols=128 Identities=13% Similarity=0.039 Sum_probs=87.1
Q ss_pred eeEEecC-CC-cEEEEEecCCCCCCceEEEEecCCCC--CcchhhHH---HHHHHhcCCcEEEEeccccC-cCCCCC-CC
Q 020630 32 KEYFETP-NG-KLFTQSFLPLDQKVKATVYMTHGYGS--DTGWMFQK---ICISYATWGYAVFAADLLGH-GRSDGI-RC 102 (323)
Q Consensus 32 ~~~~~~~-~g-~l~~~~~~~~~~~~~~~vv~~hG~~~--~~~~~~~~---~~~~l~~~g~~vi~~d~~G~-G~s~~~-~~ 102 (323)
...+.+. .| ++.++.. |.. .++||++||+++ +.. .|.. +.+.+.+.|+.|+++|.+|. +.+... ..
T Consensus 8 ~~~~~s~~~~~~~~v~~~-p~~---~~~v~llHG~~~~~~~~-~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~ 82 (280)
T 1dqz_A 8 YLQVPSASMGRDIKVQFQ-GGG---PHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPS 82 (280)
T ss_dssp EEEEEETTTTEEEEEEEE-CCS---SSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSC
T ss_pred EEEEECcccCceeEEEEc-CCC---CCEEEEECCCCCCCCcc-cccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCC
Confidence 3444443 45 6666643 332 359999999963 544 5554 34567778999999998754 222111 10
Q ss_pred ------CCCChHHH-HhhHHHHHHH-HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 103 ------YLGDMEKV-AASSLSFFKH-VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 103 ------~~~~~~~~-~~d~~~~i~~-l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
...+++++ ++++..+++. +... ..+++|+||||||.+|+.++.++|++ +++++++++.....
T Consensus 83 ~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~----~~~~~l~G~S~GG~~al~~a~~~p~~-~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 83 QSNGQNYTYKWETFLTREMPAWLQANKGVS----PTGNAAVGLSMSGGSALILAAYYPQQ-FPYAASLSGFLNPS 152 (280)
T ss_dssp TTTTCCSCCBHHHHHHTHHHHHHHHHHCCC----SSSCEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCCTT
T ss_pred ccccccccccHHHHHHHHHHHHHHHHcCCC----CCceEEEEECHHHHHHHHHHHhCCch-heEEEEecCccccc
Confidence 12355554 4788888876 4332 45899999999999999999999999 99999999887643
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=136.09 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=90.6
Q ss_pred CCceEEEEecCCCCCcc-----hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCC
Q 020630 53 KVKATVYMTHGYGSDTG-----WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~-----~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 127 (323)
+.+++|||+||++++.. +.|..+.+.|.++||+|+++|+||+|.|..+. .+.+++++++.++++.+..
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~---~~~~~l~~~i~~~l~~~~~---- 78 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN---GRGEQLLAYVKTVLAATGA---- 78 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT---SHHHHHHHHHHHHHHHHCC----
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCC----
Confidence 44789999999998762 37888999999999999999999999986542 3788899999999888753
Q ss_pred CCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 128 RDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.+++|+||||||.++..++.++|++ |+++|+++++..
T Consensus 79 --~~v~lvGHS~GG~va~~~a~~~p~~-V~~lV~i~~p~~ 115 (320)
T 1ys1_X 79 --TKVNLVGHSQGGLTSRYVAAVAPDL-VASVTTIGTPHR 115 (320)
T ss_dssp --SCEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCTT
T ss_pred --CCEEEEEECHhHHHHHHHHHhChhh-ceEEEEECCCCC
Confidence 3899999999999999999999988 999999998543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-19 Score=145.09 Aligned_cols=113 Identities=13% Similarity=0.056 Sum_probs=90.5
Q ss_pred CCceEEEEecCCCCCcchhhHH-HHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQK-ICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|.++ ||+|+++|+||+|.|.... ...+.+.+++|+.++++.+..+.+++..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ-ASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhH-hHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3478999999999887236776 66777654 8999999999999986321 1125677889999999999643222245
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+++|+||||||.+|+.+|.++|++ |+++|+++|+..
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~-v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGH-VGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccc-cceEEEecCCcc
Confidence 899999999999999999999998 999999988754
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.5e-19 Score=144.05 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=90.0
Q ss_pred CCceEEEEecCCCCCcchhhHH-HHHHHhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQK-ICISYATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|.++ ||+|+++|++|+|.|.... ...+.+.+++|+.++++.+..+.+.+..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~-~~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ-AVQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHH-HHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3478999999999886226766 77777764 8999999999999986321 1125677889999999999643222245
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+++|+||||||.+|..+|.++|++ |+++|+++|+..
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~-v~~iv~ldpa~p 182 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGR-VGRVTGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccc-eeeEEecccccc
Confidence 899999999999999999999998 999999988754
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.2e-18 Score=140.10 Aligned_cols=113 Identities=13% Similarity=0.108 Sum_probs=87.4
Q ss_pred CCceEEEEecCCCCCcchhhHH-HHHHH-hcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQK-ICISY-ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l-~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.| ...+|+|+++|++|+|.|..... ..+.+.+++++.++++.+....+.+..
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~-~~~~~~v~~~la~ll~~L~~~~g~~~~ 145 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQA-SQNVRIVGAEVAYLVGVLQSSFDYSPS 145 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4478999999999875325655 66666 34579999999999998852211 125667788999999988533222245
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+++|+||||||.+|..+|.++|++ |+++++++|+..
T Consensus 146 ~v~LIGhSlGg~vA~~~a~~~p~~-v~~iv~Ldpa~p 181 (449)
T 1hpl_A 146 NVHIIGHSLGSHAAGEAGRRTNGA-VGRITGLDPAEP 181 (449)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCT
T ss_pred cEEEEEECHhHHHHHHHHHhcchh-cceeeccCcccc
Confidence 899999999999999999999998 999999988654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-18 Score=131.73 Aligned_cols=101 Identities=13% Similarity=0.034 Sum_probs=87.1
Q ss_pred CCceEEEEecCCCCCc----chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCC
Q 020630 53 KVKATVYMTHGYGSDT----GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~----~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 128 (323)
+.+++|||+||++++. .+.|..+.+.|.++||+|+++|+||+|.+. .+.+++++++.++++.+.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~------~~~~~~~~~i~~~~~~~~------ 72 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEEIVALSG------ 72 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH------HHHHHHHHHHHHHHHHHC------
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch------hhHHHHHHHHHHHHHHhC------
Confidence 3478999999998764 237888999999999999999999999874 267888899999888875
Q ss_pred CCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
..+++++||||||.++..++..+|++ |+++|+++++.
T Consensus 73 ~~~v~lvGhS~GG~~a~~~a~~~p~~-v~~lv~i~~p~ 109 (285)
T 1ex9_A 73 QPKVNLIGHSHGGPTIRYVAAVRPDL-IASATSVGAPH 109 (285)
T ss_dssp CSCEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESCCT
T ss_pred CCCEEEEEECHhHHHHHHHHHhChhh-eeEEEEECCCC
Confidence 33899999999999999999999988 99999999854
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-17 Score=132.01 Aligned_cols=119 Identities=14% Similarity=0.098 Sum_probs=86.7
Q ss_pred EEEecCCCCCCceEEEEecCCCCCc---------chhh----HHHHHHHhcCCcE---EEEeccccCcCCCCCCCCCCCh
Q 020630 44 TQSFLPLDQKVKATVYMTHGYGSDT---------GWMF----QKICISYATWGYA---VFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 44 ~~~~~~~~~~~~~~vv~~hG~~~~~---------~~~~----~~~~~~l~~~g~~---vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
...+.+.. ..+++|||+||++++. ...| ..+++.|.++||. |+++|++|+|.|...... ...
T Consensus 30 G~~~~p~~-~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~-~~~ 107 (342)
T 2x5x_A 30 GFGGGSCT-ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYN-YHS 107 (342)
T ss_dssp EEECCSSC-CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGC-CBC
T ss_pred cccCCCCC-CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcccc-CCH
Confidence 34444443 4467899999999842 2367 7889999999998 999999999988644211 133
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
+..++++.+.++.+....+ ..+++|+||||||.+++.++.++ |++ |+++|+++++..
T Consensus 108 ~~~~~~l~~~I~~l~~~~g--~~~v~LVGHSmGG~iA~~~a~~~~~p~~-V~~lVlla~p~~ 166 (342)
T 2x5x_A 108 STKYAIIKTFIDKVKAYTG--KSQVDIVAHSMGVSMSLATLQYYNNWTS-VRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHT--CSCEEEEEETHHHHHHHHHHHHHTCGGG-EEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHHcCchhh-hcEEEEECCCcc
Confidence 4444555555554443322 34899999999999999999998 888 999999998754
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-17 Score=112.76 Aligned_cols=98 Identities=18% Similarity=0.217 Sum_probs=77.8
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+...+| +++|...++ +|+||++| ++.. .|..+ |++ +|+|+++|+||||.|...... ++++++
T Consensus 5 ~~~~~~g~~~~~~~~g~-----~~~vv~~H---~~~~-~~~~~---l~~-~~~v~~~d~~G~G~s~~~~~~---~~~~~~ 68 (131)
T 2dst_A 5 GYLHLYGLNLVFDRVGK-----GPPVLLVA---EEAS-RWPEA---LPE-GYAFYLLDLPGYGRTEGPRMA---PEELAH 68 (131)
T ss_dssp EEEEETTEEEEEEEECC-----SSEEEEES---SSGG-GCCSC---CCT-TSEEEEECCTTSTTCCCCCCC---HHHHHH
T ss_pred EEEEECCEEEEEEEcCC-----CCeEEEEc---CCHH-HHHHH---HhC-CcEEEEECCCCCCCCCCCCCC---HHHHHH
Confidence 3445678 998887764 56899999 3333 44444 655 499999999999999865542 889999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
++.++++.+..+ +++++||||||.+++.+|.++|.
T Consensus 69 ~~~~~~~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 69 FVAGFAVMMNLG------APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHTTCC------SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHcCCC------ccEEEEEChHHHHHHHHHhcCCc
Confidence 999999988643 89999999999999999999884
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.5e-16 Score=120.24 Aligned_cols=130 Identities=16% Similarity=0.127 Sum_probs=90.1
Q ss_pred ceeEEecCCCcEEEEEecCCC---CCCceEEEEecCCCCCcc-h-----hhHHHHHHHhcC----CcEEEEeccccCcCC
Q 020630 31 GKEYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-----MFQKICISYATW----GYAVFAADLLGHGRS 97 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~-----~~~~~~~~l~~~----g~~vi~~d~~G~G~s 97 (323)
+...+.+.+|.+.+.+|.|.+ .++.|+||++||.+++.. | ....+++.|.++ ++.|+++|.+|- +
T Consensus 42 ~~~~~~s~~~~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~ 119 (297)
T 1gkl_A 42 VKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--N 119 (297)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--T
T ss_pred EEEEEEcCCCEEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--c
Confidence 345566666688889998875 245689999999986543 1 134667777766 499999998752 2
Q ss_pred CCCCCCCCChHHHHhhHHHHHHHHHhhCC---------CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 98 DGIRCYLGDMEKVAASSLSFFKHVRHSEP---------YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 98 ~~~~~~~~~~~~~~~d~~~~i~~l~~~~~---------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
... .. -.+.+++++...++......+ .+..++.|+|+||||.+|+.++.++|+. +++++++++..
T Consensus 120 ~~~--~~-~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~-f~~~v~~sg~~ 193 (297)
T 1gkl_A 120 CTA--QN-FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDY-VAYFMPLSGDY 193 (297)
T ss_dssp CCT--TT-HHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTT-CCEEEEESCCC
T ss_pred cch--HH-HHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchh-hheeeEecccc
Confidence 211 11 123445677777665422110 1234799999999999999999999999 99999999864
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-17 Score=136.43 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=86.0
Q ss_pred CCceEEEEecCCCCCcchhhHH-HHHHHhc-CCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGWMFQK-ICISYAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|.+ .+|+|+++|++|+|.+.... ..++.+.+++++.++++.+....+.+..
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~-~~~~~~~~a~~l~~ll~~L~~~~g~~~~ 146 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQ-AANNVRVVGAQVAQMLSMLSANYSYSPS 146 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchH-HHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 3479999999999875425654 5666655 37999999999999875221 1125677889999999998532222245
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+++|+||||||.+|..+|.++|+ |.++++++|+..
T Consensus 147 ~v~LVGhSlGg~vA~~~a~~~p~--v~~iv~Ldpa~p 181 (450)
T 1rp1_A 147 QVQLIGHSLGAHVAGEAGSRTPG--LGRITGLDPVEA 181 (450)
T ss_dssp GEEEEEETHHHHHHHHHHHTSTT--CCEEEEESCCCT
T ss_pred hEEEEEECHhHHHHHHHHHhcCC--cccccccCcccc
Confidence 89999999999999999999987 999999988654
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-16 Score=127.21 Aligned_cols=126 Identities=14% Similarity=0.076 Sum_probs=88.8
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhH--HHHHHHhcC-CcEEEEeccccCcCCCCCCC---------CCCChH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ--KICISYATW-GYAVFAADLLGHGRSDGIRC---------YLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~---------~~~~~~ 108 (323)
+.+|.....--.+++.+|||+||..++....+. .+...|++. |+.|+++|+||||.|..... ...+.+
T Consensus 24 ~qRy~~~~~~~~~~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~ 103 (446)
T 3n2z_B 24 NQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSE 103 (446)
T ss_dssp EEEEEEECTTCCTTTCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHH
T ss_pred EEEEEEehhhcCCCCCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHH
Confidence 455554432111234568888988776542221 123334432 68999999999999964211 112689
Q ss_pred HHHhhHHHHHHHHHhhC-CCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 109 KVAASSLSFFKHVRHSE-PYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
++++|+..++++++.+. .....+++++||||||.+|+.++.++|+. |.++|+.+++..
T Consensus 104 q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~-v~g~i~ssapv~ 162 (446)
T 3n2z_B 104 QALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHM-VVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTT-CSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhcc-ccEEEEeccchh
Confidence 99999999999998863 11145899999999999999999999999 999999876544
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-16 Score=121.45 Aligned_cols=203 Identities=11% Similarity=0.084 Sum_probs=123.3
Q ss_pred ceeEEecC-CC-cEEEEEecCCC---CCCceEEEEecCCCCCcc-hhhHHHHHHH-hcCC---cEEEEeccccCc-----
Q 020630 31 GKEYFETP-NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-WMFQKICISY-ATWG---YAVFAADLLGHG----- 95 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l-~~~g---~~vi~~d~~G~G----- 95 (323)
+...+.+. +| .+.+.+|.|.+ .++-|+|+++||.+.... ..+..+...+ .+.| +.|+++|+++.+
T Consensus 19 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~ 98 (275)
T 2qm0_A 19 EQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGE 98 (275)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHH
T ss_pred eEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCccc
Confidence 34556655 57 89999999875 234699999999763211 1222233223 2346 999999998631
Q ss_pred -----CCCCCC-------------CCCCChHHHHhhH-HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCe
Q 020630 96 -----RSDGIR-------------CYLGDMEKVAASS-LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTW 156 (323)
Q Consensus 96 -----~s~~~~-------------~~~~~~~~~~~d~-~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v 156 (323)
.+.... ......+.+.+.+ .+++..+.....++..+++++||||||.+++.++.++|+. +
T Consensus 99 ~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~-f 177 (275)
T 2qm0_A 99 ERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA-F 177 (275)
T ss_dssp HHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG-C
T ss_pred ccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh-h
Confidence 111100 0011112333333 2344444444433346899999999999999999999998 9
Q ss_pred eEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh
Q 020630 157 TGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236 (323)
Q Consensus 157 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++++++|.... ....+ .. ... .+...
T Consensus 178 ~~~~~~s~~~~~--------~~~~~-------------------~~--~~~------------------------~~~~~ 204 (275)
T 2qm0_A 178 QNYFISSPSIWW--------NNKSV-------------------LE--KEE------------------------NLIIE 204 (275)
T ss_dssp SEEEEESCCTTH--------HHHGG-------------------GG--GTT------------------------HHHHH
T ss_pred ceeEEeCceeee--------ChHHH-------------------HH--HHH------------------------HHHhh
Confidence 999999876420 00000 00 000 00000
Q ss_pred hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHh---cC--CCCcEEEecCCCcccc
Q 020630 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA---SS--ADKSIKIYDGMYHSLI 292 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~gH~~~ 292 (323)
.. ......|+++++|+.|..++...++.+.+.+ .. -++++.++++.+|+..
T Consensus 205 ---~~--~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 205 ---LN--NAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp ---HH--TCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred ---hc--ccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 00 2344689999999999888888888888887 32 3467889999999765
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=9.5e-16 Score=125.10 Aligned_cols=214 Identities=13% Similarity=0.074 Sum_probs=128.9
Q ss_pred eeEEec-CCC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcE----EEEeccccCc-CCCCCCC
Q 020630 32 KEYFET-PNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISYATWGYA----VFAADLLGHG-RSDGIRC 102 (323)
Q Consensus 32 ~~~~~~-~~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~----vi~~d~~G~G-~s~~~~~ 102 (323)
...+.+ ..| ...+.+|.|.+ .++.|+|+++||.+.........+++.|+++|+. |+++|++|++ .+....
T Consensus 170 ~~~~~S~~~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~- 248 (403)
T 3c8d_A 170 EIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELP- 248 (403)
T ss_dssp EEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSS-
T ss_pred EEEEEccccCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCC-
Confidence 344443 356 88888998864 2467999999995432111234567778777765 9999998732 221111
Q ss_pred CCCChHH-HHhhHHHHHHHHHhhCC--CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 103 YLGDMEK-VAASSLSFFKHVRHSEP--YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 103 ~~~~~~~-~~~d~~~~i~~l~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
....+.+ +++++...++ ..+. .+..+++|+|+||||.+++.++.++|+. +++++++++........
T Consensus 249 ~~~~~~~~l~~el~~~i~---~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~-f~~~~~~sg~~~~~~~~------- 317 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVK---VIAPFSDRADRTVVAGQSFGGLSALYAGLHWPER-FGCVLSQSGSYWWPHRG------- 317 (403)
T ss_dssp SCHHHHHHHHHTHHHHHH---HHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTT-CCEEEEESCCTTTTCTT-------
T ss_pred ChHHHHHHHHHHHHHHHH---HHCCCCCCCCceEEEEECHHHHHHHHHHHhCchh-hcEEEEeccccccCCCC-------
Confidence 1012222 2344444444 4332 2356899999999999999999999998 99999998875322100
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
. . .. ..+..... .........|+++++|+.|
T Consensus 318 -----------~----~---------~~--------------------~~~~~~~~-----~~~~~~~~~~i~l~~G~~D 348 (403)
T 3c8d_A 318 -----------G----Q---------QE--------------------GVLLEKLK-----AGEVSAEGLRIVLEAGIRE 348 (403)
T ss_dssp -----------S----S---------SC--------------------CHHHHHHH-----TTSSCCCSCEEEEEEESSC
T ss_pred -----------C----C---------cH--------------------HHHHHHHH-----hccccCCCceEEEEeeCCC
Confidence 0 0 00 00000000 0112344678999999988
Q ss_pred cccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+ .+.++.+.+.+. +.++++.+++| ||... ........+..||.+.
T Consensus 349 ~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~~~------~w~~~l~~~l~~l~~~ 397 (403)
T 3c8d_A 349 PMI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL------CWRGGLMQGLIDLWQP 397 (403)
T ss_dssp HHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH------HHHHHHHHHHHHHHGG
T ss_pred chh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCCHH------HHHHHHHHHHHHHhcc
Confidence 654 467778888874 33578899998 68754 2344555666777654
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-17 Score=133.83 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=76.8
Q ss_pred CCceEEEEecCCCCCc-------chhhH----HHHHHHhcCCcEEEEeccccCcCCCCCCC------------------C
Q 020630 53 KVKATVYMTHGYGSDT-------GWMFQ----KICISYATWGYAVFAADLLGHGRSDGIRC------------------Y 103 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~-------~~~~~----~~~~~l~~~g~~vi~~d~~G~G~s~~~~~------------------~ 103 (323)
+.+++|||+||++++. ...|. .+++.|.++||+|+++|+||+|.|..... .
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 4578999999998741 22564 58889988899999999999998742100 0
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh--------------------------cCCCCee
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ--------------------------SEPNTWT 157 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--------------------------~p~~~v~ 157 (323)
.++++.+++|+.++++.+.. ..+++||||||||.++..+|.. +|++ |.
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~-----~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~-V~ 203 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKP-----GHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNM-VT 203 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBT-----TBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSC-EE
T ss_pred cCCHHHHHHHHHHHHHHhCC-----CCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccc-ee
Confidence 01122223344444444321 2489999999999999998876 5778 99
Q ss_pred EEEEccCccC
Q 020630 158 GLIFSAPLFV 167 (323)
Q Consensus 158 ~~il~~~~~~ 167 (323)
++|+++++..
T Consensus 204 slv~i~tP~~ 213 (431)
T 2hih_A 204 SITTIATPHN 213 (431)
T ss_dssp EEEEESCCTT
T ss_pred EEEEECCCCC
Confidence 9999998643
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-14 Score=115.17 Aligned_cols=102 Identities=12% Similarity=0.019 Sum_probs=71.0
Q ss_pred CceEEEEecCCCCCcc------hhhH----HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH---
Q 020630 54 VKATVYMTHGYGSDTG------WMFQ----KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH--- 120 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~------~~~~----~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~--- 120 (323)
.+++|||+||++++.. ..|. .+++.|.++||+|+++|++|+|.|.. .+.++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~----------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD----------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH----------HHHHHHHHHHCEEE
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc----------cHHHHHHHHHhhhh
Confidence 4678999999987642 1354 45588988899999999999997631 12222222221
Q ss_pred -----HH-----------------hhCCCCCCCEEEEEechhHHHHHHHHhh-------------------cC------C
Q 020630 121 -----VR-----------------HSEPYRDLPAFLFGESMGGAATMLMYFQ-------------------SE------P 153 (323)
Q Consensus 121 -----l~-----------------~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-------------------~p------~ 153 (323)
+. ...+ ..+++||||||||.++..++.. +| +
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~--~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~ 152 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKR--GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHH 152 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGT--TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCC
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcC--CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCcccccccc
Confidence 00 0011 4589999999999999999972 24 5
Q ss_pred CCeeEEEEccCccCC
Q 020630 154 NTWTGLIFSAPLFVI 168 (323)
Q Consensus 154 ~~v~~~il~~~~~~~ 168 (323)
+ |+++|+++++...
T Consensus 153 ~-V~sLV~i~tP~~G 166 (387)
T 2dsn_A 153 F-VLSVTTIATPHDG 166 (387)
T ss_dssp C-EEEEEEESCCTTC
T ss_pred c-eeEEEEECCCCCC
Confidence 6 9999999986543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.1e-14 Score=112.27 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=75.4
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
+.+++++|+||++++.. .|..+.+.|. +.|+++|+|+ . .. ..+++++++++.+.++.+.. ..++
T Consensus 44 ~~~~~l~~~hg~~g~~~-~~~~~~~~l~---~~v~~~~~~~--~---~~--~~~~~~~a~~~~~~i~~~~~-----~~~~ 107 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTT-VFHSLASRLS---IPTYGLQCTR--A---AP--LDSIHSLAAYYIDCIRQVQP-----EGPY 107 (316)
T ss_dssp CSSCCEEEECCTTCCSG-GGHHHHHHCS---SCEEEECCCT--T---SC--TTCHHHHHHHHHHHHTTTCS-----SCCC
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC---CCEEEEECCC--C---CC--cCCHHHHHHHHHHHHHHhCC-----CCCE
Confidence 34788999999998876 8888888884 8999999993 1 11 23789999988888766542 2379
Q ss_pred EEEEechhHHHHHHHHhhcCC--CC---eeEEEEccCcc
Q 020630 133 FLFGESMGGAATMLMYFQSEP--NT---WTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~--~~---v~~~il~~~~~ 166 (323)
+++||||||.+|+.+|.+.+. .. +++++++++..
T Consensus 108 ~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 108 RVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred EEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 999999999999999987532 22 78899887653
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-13 Score=106.58 Aligned_cols=213 Identities=9% Similarity=0.018 Sum_probs=119.1
Q ss_pred ceeEEecCC-C-cEEEEEecCCC---CCCceEEEEecCCCCCcchhhHHHHHHHhc-CCcEEEEeccccCc---------
Q 020630 31 GKEYFETPN-G-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQKICISYAT-WGYAVFAADLLGHG--------- 95 (323)
Q Consensus 31 ~~~~~~~~~-g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G--------- 95 (323)
+...+.+.. | .+.+.+|.|.+ .++-|+|+++||...... ....+.+.|++ .+..|+++++++-.
T Consensus 14 ~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~-~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~ 92 (278)
T 2gzs_A 14 SATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR-LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAY 92 (278)
T ss_dssp EEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH-CCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHH
T ss_pred EEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH-HHHHHHHHhccCCCeEEEEEcCCCCCcCccccccc
Confidence 445566655 5 88888888865 233477777777542211 11234455654 56778888886421
Q ss_pred -CCCCC------------CCCCCChHHHHhhH-HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEE
Q 020630 96 -RSDGI------------RCYLGDMEKVAASS-LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 96 -~s~~~------------~~~~~~~~~~~~d~-~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il 161 (323)
.+... .........+.+.+ .+++.++...+.++..+++|+||||||.+++.++.+ |+. ++++++
T Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~-f~~~~~ 170 (278)
T 2gzs_A 93 DYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSY-FRSYYS 170 (278)
T ss_dssp HTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSS-CSEEEE
T ss_pred ccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccc-cCeEEE
Confidence 11110 00001123333333 234444555554445579999999999999999999 998 999999
Q ss_pred ccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH
Q 020630 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|...... . .+.. ..... .
T Consensus 171 ~s~~~~~~~----~----~~~~-----------------------------~~~~~-----------------------~ 190 (278)
T 2gzs_A 171 ASPSLGRGY----D----ALLS-----------------------------RVTAV-----------------------E 190 (278)
T ss_dssp ESGGGSTTH----H----HHHH-----------------------------HHHTS-----------------------C
T ss_pred eCcchhcCc----c----hHHH-----------------------------HHHHh-----------------------h
Confidence 987642110 0 0000 00000 0
Q ss_pred hcCCcccccEEEEeeCCCcccC--------chhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 242 DNFSKVTVPFLTVHGTADGVTC--------PTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
.. ..-..|+++.+|+.|...+ ...++.+.+.+. +-++++.++++.+|.... ...+.+ ..+||
T Consensus 191 ~~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~------~~~~~~-~l~fl 262 (278)
T 2gzs_A 191 PL-QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF------NASFRQ-ALLDI 262 (278)
T ss_dssp TT-TTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH------HHHHHH-HHHHH
T ss_pred cc-CCCCCcEEEEecCccccccccchhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchh------HHHHHH-HHHHH
Confidence 00 0114589999999997643 566777777663 345788899998898651 233433 34577
Q ss_pred HHH
Q 020630 312 DER 314 (323)
Q Consensus 312 ~~~ 314 (323)
.+.
T Consensus 263 ~~~ 265 (278)
T 2gzs_A 263 SGE 265 (278)
T ss_dssp TTC
T ss_pred hhC
Confidence 653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-11 Score=96.93 Aligned_cols=113 Identities=11% Similarity=-0.054 Sum_probs=82.0
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccc-----------cCcCCC---CCCCCCCC
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLL-----------GHGRSD---GIRCYLGD 106 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~-----------G~G~s~---~~~~~~~~ 106 (323)
.+...++.|.+.++-|+||.+||... ...+||.++.++.. |+|.-. +.......
T Consensus 124 sf~~~i~lP~g~~P~Pvii~~~~~~~------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~ga 191 (433)
T 4g4g_A 124 SFSASIRKPSGAGPFPAIIGIGGASI------------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGS 191 (433)
T ss_dssp EEEEEEECCSSSCCEEEEEEESCCCS------------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCH
T ss_pred EEEEEEECCCCCCCccEEEEECCCcc------------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHH
Confidence 46788888977666788888886321 13569999999872 222100 10111224
Q ss_pred hHHHHhhHHHHHHHHHh----hCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 107 MEKVAASSLSFFKHVRH----SEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~----~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+..++-++..+|++|.. ...+|..+|.++|||+||..|+.+++..+. |+.+|..++..+
T Consensus 192 l~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~R--i~~vi~~~sg~~ 254 (433)
T 4g4g_A 192 LTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVDR--IALTIPQESGAG 254 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCTT
T ss_pred HHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCCc--eEEEEEecCCCC
Confidence 55667789999999988 667788899999999999999999998664 999999886554
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-11 Score=94.36 Aligned_cols=113 Identities=13% Similarity=-0.010 Sum_probs=81.1
Q ss_pred cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEecc--------c---cCcCCC---CCCCCCC
Q 020630 41 KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADL--------L---GHGRSD---GIRCYLG 105 (323)
Q Consensus 41 ~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~--------~---G~G~s~---~~~~~~~ 105 (323)
.+...++.|.+ .++-|+||-+||.... ..+||.++.++. + |+|.-. +......
T Consensus 91 ~~~~~i~lP~~~~~p~Pvii~i~~~~~~------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~g 158 (375)
T 3pic_A 91 SFTVTITYPSSGTAPYPAIIGYGGGSLP------------APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAG 158 (375)
T ss_dssp EEEEEEECCSSSCSSEEEEEEETTCSSC------------CCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCC
T ss_pred EEEEEEECCCCCCCCccEEEEECCCccc------------cCCCeEEEEecccccccccCCCCccceecccccCCccchH
Confidence 57788888876 3456788888883211 346999999976 1 222110 1011122
Q ss_pred ChHHHHhhHHHHHHHHHhhC--CCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 106 DMEKVAASSLSFFKHVRHSE--PYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~--~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.+..++-++..+|++|.... .+|..+|.++|||+||..|+.+++..+ + |+.+|..++..+
T Consensus 159 al~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-R-i~~~v~~~~g~~ 220 (375)
T 3pic_A 159 AMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-R-IVLTLPQESGAG 220 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-T-EEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-c-eEEEEeccCCCC
Confidence 45666778999999999886 788889999999999999999999866 4 999998886544
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.4e-11 Score=95.24 Aligned_cols=197 Identities=10% Similarity=0.005 Sum_probs=114.5
Q ss_pred eeEEecC-CC-cEEEEEecCCC----CCCceEEEEecCCCCCcchhhHHHHHHHhc------CCcEEEEeccccC--cCC
Q 020630 32 KEYFETP-NG-KLFTQSFLPLD----QKVKATVYMTHGYGSDTGWMFQKICISYAT------WGYAVFAADLLGH--GRS 97 (323)
Q Consensus 32 ~~~~~~~-~g-~l~~~~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~------~g~~vi~~d~~G~--G~s 97 (323)
...+.+. -| +..+.++.|++ .+.-|+|+++||.... . ....+.+.+.. .++-|+.++.... ..+
T Consensus 14 ~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~f-~-~~~~~~~~l~~~~~~~~~~~IvV~i~~~~R~~dyt 91 (331)
T 3gff_A 14 SKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQF-D-HMASLLQFLSQGTMPQIPKVIIVGIHNTNRMRDYT 91 (331)
T ss_dssp EEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHHH-H-HHHHHHHHHTCSSSCSSCCCEEEEECCSSHHHHSC
T ss_pred EEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhhh-H-HHHHHHHHHHhhhhcCCCCEEEEEECCCCcccccC
Confidence 3444444 35 88889999875 2345899999994311 1 12334555543 2467788765211 011
Q ss_pred CCCC-----C------C--CCChHHHHhhH-HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEcc
Q 020630 98 DGIR-----C------Y--LGDMEKVAASS-LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 98 ~~~~-----~------~--~~~~~~~~~d~-~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~ 163 (323)
+... + . ...-+.+.+.+ .+++.++..++.++. ..+|+||||||..++.++.++|+. +++++.++
T Consensus 92 p~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~-~r~i~G~S~GG~~al~~~~~~p~~-F~~~~~~S 169 (331)
T 3gff_A 92 PTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNG-INVLVGHSFGGLVAMEALRTDRPL-FSAYLALD 169 (331)
T ss_dssp SSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEE-EEEEEEETHHHHHHHHHHHTTCSS-CSEEEEES
T ss_pred CCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCC-CeEEEEECHHHHHHHHHHHhCchh-hheeeEeC
Confidence 0000 0 0 01223333333 234455555544333 347999999999999999999999 99999999
Q ss_pred CccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhc
Q 020630 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
|........ +..........
T Consensus 170 ~~~w~~~~~------------------------------------------------------------~~~~~~~~~~~ 189 (331)
T 3gff_A 170 TSLWFDSPH------------------------------------------------------------YLTLLEERVVK 189 (331)
T ss_dssp CCTTTTTTH------------------------------------------------------------HHHHHHHHHHH
T ss_pred chhcCChHH------------------------------------------------------------HHHHHHHHhhc
Confidence 864311100 00000000111
Q ss_pred CCcccccEEEEeeCCCc-------ccCchhHHHHHHHhc-----CCCCcEEEecCCCcccc
Q 020630 244 FSKVTVPFLTVHGTADG-------VTCPTSSKLLYEKAS-----SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~-------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~ 292 (323)
......|+++.+|+.|. .++.+.++++.+.+. +-++++.++++.+|...
T Consensus 190 ~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 190 GDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp CCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTH
T ss_pred ccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCcccc
Confidence 12246799999999998 355556677776663 22568899999999877
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.8e-10 Score=88.58 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=77.4
Q ss_pred CCC-cEEEEEecCCC--------CCCceEEEEecCCCCCcchhhHH---HHHHHhcCCcEEEEeccccCcC---------
Q 020630 38 PNG-KLFTQSFLPLD--------QKVKATVYMTHGYGSDTGWMFQK---ICISYATWGYAVFAADLLGHGR--------- 96 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~--------~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~--------- 96 (323)
.-| ++.+.+|.|++ +++-|+|.++||++++.. .|.. +.+.+.+.+..++.+|..-.+.
T Consensus 23 ~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 23 STKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred ccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChH-HHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 345 88889998864 134599999999998865 4432 3344455578888887431110
Q ss_pred -------CCCCCC------CCCCh-HHHHhhHHHHHHHHHhhCC----CCCCCEEEEEechhHHHHHHHHhhc--CCCCe
Q 020630 97 -------SDGIRC------YLGDM-EKVAASSLSFFKHVRHSEP----YRDLPAFLFGESMGGAATMLMYFQS--EPNTW 156 (323)
Q Consensus 97 -------s~~~~~------~~~~~-~~~~~d~~~~i~~l~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v 156 (323)
+..... ..+.+ +.+++++..+|+..-.... .+..+..|.||||||.-|+.+|.++ |.. .
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~-~ 180 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKR-Y 180 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTC-C
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCc-e
Confidence 000000 00112 3355777777664332110 0124689999999999999999985 566 7
Q ss_pred eEEEEccCccC
Q 020630 157 TGLIFSAPLFV 167 (323)
Q Consensus 157 ~~~il~~~~~~ 167 (323)
.++...++...
T Consensus 181 ~~~~s~s~~~~ 191 (299)
T 4fol_A 181 KSCSAFAPIVN 191 (299)
T ss_dssp SEEEEESCCCC
T ss_pred EEEEecccccC
Confidence 77777776544
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.30 E-value=6.1e-11 Score=99.07 Aligned_cols=123 Identities=15% Similarity=0.036 Sum_probs=80.0
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCC---CCcchhhHHHHHHHhcC-CcEEEEeccc----cCcCCCCCCCCCCChHHHH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYG---SDTGWMFQKICISYATW-GYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
.|...+|.|... ++.|+||++||.+ ++.. .+......|+++ |+.|+.+|+| |++.+...... .....-.
T Consensus 82 cL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~-~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~gl 159 (489)
T 1qe3_A 82 CLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGS-EPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEA-YSDNLGL 159 (489)
T ss_dssp CCEEEEEEECSSCCSEEEEEEECCSTTTSCCTT-SGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTT-SCSCHHH
T ss_pred CCEEEEEeCCCCCCCCCEEEEECCCccccCCCC-CcccCHHHHHhcCCEEEEecCccCcccccCcccccccc-CCCCcch
Confidence 466677777542 3479999999975 2222 222234456555 4999999999 56554322110 1122234
Q ss_pred hhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCcc
Q 020630 112 ASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 112 ~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~ 166 (323)
.|+.++++++... .+.+..+|.|+|+|+||.++..++... +.. ++++|+.++..
T Consensus 160 ~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~ 218 (489)
T 1qe3_A 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGL-FQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS-CSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccch-HHHHHHhCCCC
Confidence 5666667766554 223466899999999999998887753 456 99999998865
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3.6e-11 Score=100.66 Aligned_cols=125 Identities=14% Similarity=0.101 Sum_probs=85.0
Q ss_pred cEEEEEecCCC-CCCceEEEEecCCC---CCcchhhHHHHHHHhcCC-cEEEEeccc----cCcCCCCCCC--CCCChHH
Q 020630 41 KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISYATWG-YAVFAADLL----GHGRSDGIRC--YLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~-~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~g-~~vi~~d~~----G~G~s~~~~~--~~~~~~~ 109 (323)
.|...+|.|.. .++.|+||++||.+ ++.. ........|+++| +.|+++|+| |++.+..... .......
T Consensus 84 cl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~ 162 (498)
T 2ogt_A 84 GLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGS-SPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNL 162 (498)
T ss_dssp CCEEEEEESCSSSCCEEEEEEECCSTTTSCCTT-CGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGH
T ss_pred CcEEEEEecCCCCCCCcEEEEEcCCccCCCCCC-CCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCc
Confidence 35556677753 24579999999987 3332 2112245566665 999999999 8887764321 1113334
Q ss_pred HHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 110 VAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
-..|...++++++.. .+.+..+|.|+|+|.||.++..++... +.. ++++|+.++...
T Consensus 163 gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~~ 224 (498)
T 2ogt_A 163 GILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGL-FRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTS-CSEEEEESCCTT
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccch-hheeeeccCCcc
Confidence 457777777777664 233467899999999999998877653 445 999999998654
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=90.34 Aligned_cols=148 Identities=10% Similarity=-0.011 Sum_probs=86.6
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhcCCCCee-EEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccc
Q 020630 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWT-GLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~-~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++..+|+|.|+|+||++++.++..+|+. ++ +++++++.......... . ...+. .. +....
T Consensus 8 iD~~RI~v~G~S~GG~mA~~~a~~~p~~-fa~g~~v~ag~p~~~~~~~~------~---~~~~~-~~--------~~~~~ 68 (318)
T 2d81_A 8 VNPNSVSVSGLASGGYMAAQLGVAYSDV-FNVGFGVFAGGPYDCARNQY------Y---TSCMY-NG--------YPSIT 68 (318)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHTTTT-SCSEEEEESCCCTTTTSSSC------G---GGGST-TC--------CCCCH
T ss_pred cCcceEEEEEECHHHHHHHHHHHHCchh-hhccceEEecccccccchHH------H---HHHhh-cc--------CCCCC
Confidence 3466899999999999999999999998 88 88776653211110000 0 00000 00 00000
Q ss_pred cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc-cccEEEEeeCCCcccCchhHHHHHHHhcCC----CCc
Q 020630 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSA----DKS 280 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~ 280 (323)
........... .....+.++ ..|++++||++|.+||++.++++.+.+... +++
T Consensus 69 ~~~~~~~~~~~----------------------~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve 126 (318)
T 2d81_A 69 TPTANMKSWSG----------------------NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVS 126 (318)
T ss_dssp HHHHHHHHHBT----------------------TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEE
T ss_pred CHHHHHHHhhc----------------------ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceE
Confidence 00000000000 001112233 469999999999999999999999888422 468
Q ss_pred EEEecCCCccccccCC--c--hh-----------HHHHHHHHHHHHHHHH
Q 020630 281 IKIYDGMYHSLIQGEP--D--EN-----------ANLVLKDMREWIDERV 315 (323)
Q Consensus 281 ~~~~~~~gH~~~~~~~--~--~~-----------~~~~~~~i~~fl~~~~ 315 (323)
++.++++||.+..... . .. --.-...|.+||...+
T Consensus 127 ~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 127 YVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp EEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCHHHHHHHHHHSSC
T ss_pred EEEeCCCCCCCccCCcccCccccccCCCCcccCCCChHHHHHHHHHhccC
Confidence 8899999999875443 1 00 1234567888886544
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.5e-07 Score=76.34 Aligned_cols=136 Identities=13% Similarity=0.110 Sum_probs=91.8
Q ss_pred cceeEEecC-CC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHH-----------------HHhcCCcEEEEe
Q 020630 30 NGKEYFETP-NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI-----------------SYATWGYAVFAA 89 (323)
Q Consensus 30 ~~~~~~~~~-~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~l~~~g~~vi~~ 89 (323)
....++... .+ .++|+.+.... ...+|++|+++|.++.++ .+..+.+ .+.+. .+++-+
T Consensus 16 ~ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sW~~~-an~lfi 93 (421)
T 1cpy_A 16 QYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFALGPSSIGPDLKPIGNPYSWNSN-ATVIFL 93 (421)
T ss_dssp CCEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHTTTTSSEEEETTTEEEECTTCGGGG-SEEECC
T ss_pred eeEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHh-HHHHHHccCCcEECCCCceeECCcccccc-cCEEEe
Confidence 344556554 46 89988776543 355899999999988765 3322211 12222 578999
Q ss_pred cc-ccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCC-CCC--CCEEEEEechhHHHHHHHHhhc-----CCCCeeEEE
Q 020630 90 DL-LGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEP-YRD--LPAFLFGESMGGAATMLMYFQS-----EPNTWTGLI 160 (323)
Q Consensus 90 d~-~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~-~~~--~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~i 160 (323)
|. .|.|.|-.......+.++.++|+..+++..-.+.+ ... .+++|.|.|+||..+-.+|..- +..++++++
T Consensus 94 DqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~ 173 (421)
T 1cpy_A 94 DQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVL 173 (421)
T ss_dssp CCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEE
T ss_pred cCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEE
Confidence 95 58998865433234667788899888887766554 234 6899999999999888777542 122389998
Q ss_pred EccCccC
Q 020630 161 FSAPLFV 167 (323)
Q Consensus 161 l~~~~~~ 167 (323)
+.++..+
T Consensus 174 IGNg~~d 180 (421)
T 1cpy_A 174 IGNGLTD 180 (421)
T ss_dssp EESCCCC
T ss_pred ecCcccC
Confidence 8777654
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=1e-09 Score=92.73 Aligned_cols=123 Identities=17% Similarity=0.099 Sum_probs=79.9
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCCCC---cchhhHHHHHHHhc-CCcEEEEeccc----cCcCCCCCCCCCCChHHHH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD---TGWMFQKICISYAT-WGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~-~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|...+|.|... ++.|+||++||.+.. .. ........|++ .|+.|+++++| |++.+...... ....-.
T Consensus 92 cl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~--~~n~gl 168 (529)
T 1p0i_A 92 CLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSS-LHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEA--PGNMGL 168 (529)
T ss_dssp CCEEEEEEESSCCSSEEEEEEECCSTTTSCCTT-CGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS--CSCHHH
T ss_pred CCeEEEeeCCCCCCCCeEEEEECCCccccCCCC-ccccChHHHhccCCeEEEEecccccccccccCCCCCCC--cCcccH
Confidence 455566766542 457999999997632 22 11112344554 58999999999 45444221111 222335
Q ss_pred hhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 112 ASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
.|...++++++.. .+.+..+|.|+|+|.||.++..++... ... ++++|+.++...
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~Sg~~~ 228 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSL-FTRAILQSGSFN 228 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGG-CSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHH-HHHHHHhcCccc
Confidence 6677777777654 234567899999999999998887653 345 899999988654
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=91.78 Aligned_cols=125 Identities=14% Similarity=0.061 Sum_probs=79.2
Q ss_pred cCCCcEEEEEecCCC--CCCceEEEEecCCCCC---cchhhHHHHHHHhc-CCcEEEEeccc----cCcCCCCCCCCCCC
Q 020630 37 TPNGKLFTQSFLPLD--QKVKATVYMTHGYGSD---TGWMFQKICISYAT-WGYAVFAADLL----GHGRSDGIRCYLGD 106 (323)
Q Consensus 37 ~~~g~l~~~~~~~~~--~~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~-~g~~vi~~d~~----G~G~s~~~~~~~~~ 106 (323)
+.|. |...+|.|.. .++.|+||++||.+.. .. ........|+. .|+.|+++++| |++.+...... .
T Consensus 93 ~edc-l~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~--~ 168 (543)
T 2ha2_A 93 SEDC-LYLNVWTPYPRPASPTPVLIWIYGGGFYSGAAS-LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREA--P 168 (543)
T ss_dssp ESCC-CEEEEEEESSCCSSCEEEEEEECCSTTTCCCTT-SGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSC--C
T ss_pred CCcC-CeEEEeecCCCCCCCCeEEEEECCCccccCCCC-CCcCChHHHHhcCCEEEEEecccccccccccCCCCCCC--C
Confidence 3444 4455666643 2345999999997632 21 11112344554 68999999999 44444211111 2
Q ss_pred hHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCcc
Q 020630 107 MEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~ 166 (323)
...-..|..+++++++.. .+.+..+|.|+|+|.||.++..++... +.. ++++|+.++..
T Consensus 169 ~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~ 232 (543)
T 2ha2_A 169 GNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL-FHRAVLQSGTP 232 (543)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTT-CSEEEEESCCS
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHh-HhhheeccCCc
Confidence 223356777777777654 234567999999999999988776653 455 89999998754
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-08 Score=75.49 Aligned_cols=127 Identities=17% Similarity=0.098 Sum_probs=90.5
Q ss_pred CC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhh-HHHHH------------------HHhcCCcEEEEecc-ccCcC
Q 020630 39 NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMF-QKICI------------------SYATWGYAVFAADL-LGHGR 96 (323)
Q Consensus 39 ~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-~~~~~------------------~l~~~g~~vi~~d~-~G~G~ 96 (323)
.| +++|+.+.... ...+|+||+++|.++.++ .+ ..+.+ .+.+. .+++-+|. .|.|.
T Consensus 30 ~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anvlfiDqPvGtGf 107 (255)
T 1whs_A 30 AGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSS-VAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANVLFLDSPAGVGF 107 (255)
T ss_dssp TTEEEEEEEECCCGGGCSCCEEEEECCTTTBCT-TTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEEEEECCSTTSTT
T ss_pred CCcEEEEEEEEecCCCCCCCEEEEECCCCchHH-HHHHHHhccCCeEecCCCCeeeeCccccccc-CCEEEEecCCCCcc
Confidence 56 89998886543 345899999999988776 43 43321 12232 78999996 59999
Q ss_pred CCCCCC--C-CCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhhc-----CCCCeeEEEEccCccC
Q 020630 97 SDGIRC--Y-LGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 97 s~~~~~--~-~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~il~~~~~~ 167 (323)
|-.... . ..+.++.++|+..+++..-.+.+ ....+++|.|.|+||..+..+|..- +...++++++.++..+
T Consensus 108 Sy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 108 SYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp CEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCB
T ss_pred CCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccC
Confidence 854332 2 24678888999998887766543 3356899999999999888777541 2234899999998775
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-08 Score=81.95 Aligned_cols=136 Identities=19% Similarity=0.148 Sum_probs=88.7
Q ss_pred ccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHH------------------HHhcCCcEEEE
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI------------------SYATWGYAVFA 88 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~g~~vi~ 88 (323)
.....++...++ +++|+.+.... ...+|+||++||.++.++ .+..+.+ .+.+ -.+++-
T Consensus 20 ~~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss-~~g~~~e~GP~~~~~~~~~l~~n~~sw~~-~~~~lf 97 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLY 97 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEE
T ss_pred eeeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEEeCCCceeeeCCCcccc-cccEEE
Confidence 334556776667 99998776543 245799999999998766 4433221 0123 378999
Q ss_pred ecc-ccCcCCCCCCC-CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh----cCCCCeeEEEE
Q 020630 89 ADL-LGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ----SEPNTWTGLIF 161 (323)
Q Consensus 89 ~d~-~G~G~s~~~~~-~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~il 161 (323)
+|. +|.|.|..... ...+-+..++|+..++...-...+ ....+++|+|+|+||..+..+|.. .+-. ++++++
T Consensus 98 iDqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~-l~g~~i 176 (452)
T 1ivy_A 98 LESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMN-LQGLAV 176 (452)
T ss_dssp ECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSC-EEEEEE
T ss_pred EecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccc-cceEEe
Confidence 996 69999964322 222345566666555544433321 235689999999999966555543 3344 999999
Q ss_pred ccCccC
Q 020630 162 SAPLFV 167 (323)
Q Consensus 162 ~~~~~~ 167 (323)
.+|..+
T Consensus 177 gn~~~d 182 (452)
T 1ivy_A 177 GNGLSS 182 (452)
T ss_dssp ESCCSB
T ss_pred cCCccC
Confidence 998765
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-09 Score=91.52 Aligned_cols=123 Identities=15% Similarity=0.051 Sum_probs=80.0
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCCCC---cchhhHHHHHHHh-cCCcEEEEeccc----cCcCCCCCCCCCCChHHHH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD---TGWMFQKICISYA-TWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~~~---~~~~~~~~~~~l~-~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|...+|.|... ++.|+||++||.+.. .. ........|+ +.|+.|+++++| |+..+...... ....-.
T Consensus 94 cl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~--~~n~gl 170 (537)
T 1ea5_A 94 CLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSST-LDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEA--PGNVGL 170 (537)
T ss_dssp CCEEEEEECSSCCSSEEEEEEECCSTTTCCCTT-CGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSS--CSCHHH
T ss_pred CCeEEEeccCCCCCCCeEEEEECCCcccCCCCC-CCccChHHHHhcCCEEEEEeccCccccccccCCCCCCC--cCcccc
Confidence 455566777542 457999999997632 21 1111234455 569999999999 44444211111 122335
Q ss_pred hhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCccC
Q 020630 112 ASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~~ 167 (323)
.|...++++++.. .+.+..+|.|+|+|.||.++..++.. .+.. ++++|+.++...
T Consensus 171 ~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~Sg~~~ 230 (537)
T 1ea5_A 171 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDL-FRRAILQSGSPN 230 (537)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTT-CSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhh-hhhheeccCCcc
Confidence 6777777777664 23456799999999999999887765 2345 999999988654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.7e-09 Score=91.70 Aligned_cols=121 Identities=15% Similarity=0.067 Sum_probs=78.5
Q ss_pred cEEEEEecC-----CC--CCC----ceEEEEecCCCC---CcchhhHHHHHHHhcCCcEEEEecccc----CcCCCCCCC
Q 020630 41 KLFTQSFLP-----LD--QKV----KATVYMTHGYGS---DTGWMFQKICISYATWGYAVFAADLLG----HGRSDGIRC 102 (323)
Q Consensus 41 ~l~~~~~~~-----~~--~~~----~~~vv~~hG~~~---~~~~~~~~~~~~l~~~g~~vi~~d~~G----~G~s~~~~~ 102 (323)
-|...+|.| .. .++ .|+||++||.+. +.. ........|++.|+.|+++|+|. +..+... .
T Consensus 90 cL~lnv~~P~~~~~~~~~~~~~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~-~ 167 (551)
T 2fj0_A 90 CIHANIHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGD-SDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNST-S 167 (551)
T ss_dssp CCEEEEEEEGGGCCCC--------CEEEEEEECCSTTTSCCSC-TTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSS-S
T ss_pred CeEEEEEecCccccccccccCcCCCCCEEEEEcCCccccCCCc-ccccCHHHHHhCCeEEEEeCCcCCccccccCccc-C
Confidence 456666666 32 233 689999999653 222 11123456777899999999994 3322211 1
Q ss_pred CCCChHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCcc
Q 020630 103 YLGDMEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~ 166 (323)
. ....-..|...++++++.. .+.+..+|.|+|+|.||.++..++.. .+.. ++++|+.++..
T Consensus 168 ~--~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~ 233 (551)
T 2fj0_A 168 V--PGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGL-FRRAILMSGTS 233 (551)
T ss_dssp C--CSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS-CSEEEEESCCT
T ss_pred C--CCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhh-hhheeeecCCc
Confidence 1 1223356777777777665 23456789999999999999988876 3556 99999988764
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=5.8e-09 Score=88.37 Aligned_cols=120 Identities=14% Similarity=0.163 Sum_probs=78.4
Q ss_pred cEEEEEecCCCC---CCceEEEEecCCCCC---cchhhHHHHHHHh-cCCcEEEEeccc----cCcCCCCCCCCCCChHH
Q 020630 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSD---TGWMFQKICISYA-TWGYAVFAADLL----GHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~hG~~~~---~~~~~~~~~~~l~-~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~ 109 (323)
-|...+|.|... ++.|+||++||.+.. .. .|.. ..|+ +.|+.|+++|+| |++.+..... ....
T Consensus 98 cl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~-~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~---~~n~ 171 (542)
T 2h7c_A 98 CLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAS-TYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHS---RGNW 171 (542)
T ss_dssp CCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCST-TSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTC---CCCH
T ss_pred CcEEEEEECCCCCCCCCCCEEEEECCCcccCCCcc-ccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccC---ccch
Confidence 355667777542 457999999997532 22 2221 1243 368999999999 4544422111 1112
Q ss_pred HHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCccC
Q 020630 110 VAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~~ 167 (323)
-..|...++++++.. .+.+..+|.|+|+|.||.++..++.. .+.. ++++|+.++...
T Consensus 172 gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~l-f~~ai~~Sg~~~ 233 (542)
T 2h7c_A 172 GHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL-FHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTS-CSEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHH-HHHHhhhcCCcc
Confidence 245667777777654 23456799999999999999888876 3556 999999887654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.86 E-value=2e-08 Score=94.29 Aligned_cols=208 Identities=12% Similarity=0.046 Sum_probs=112.2
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
.+.++++|+.++... .|..++..|. .+.|++++.+ +.++.++...+.+..+.. ..++.+
T Consensus 1058 ~~~L~~l~~~~g~~~-~y~~la~~L~--~~~v~~l~~~-------------~~~~~~~~~~~~i~~~~~-----~gp~~l 1116 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGL-MYQNLSSRLP--SYKLCAFDFI-------------EEEDRLDRYADLIQKLQP-----EGPLTL 1116 (1304)
T ss_dssp CCEEECCCCTTCBGG-GGHHHHTTCC--SCEEEECBCC-------------CSTTHHHHHHHHHHHHCC-----SSCEEE
T ss_pred CCcceeecccccchH-HHHHHHhccc--ccceEeeccc-------------CHHHHHHHHHHHHHHhCC-----CCCeEE
Confidence 568999999988765 7888877775 4889888763 334455555555555532 348999
Q ss_pred EEechhHHHHHHHHhhc---CCCCeeEEEEccCccCCCCCCchhH-HHHHHhhcccccccccccCCCcccccccccChhh
Q 020630 135 FGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSK-LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
+|||+||.+|..+|.+. ... +..++++++............ .......+....... ........
T Consensus 1117 ~G~S~Gg~lA~e~A~~L~~~g~~-v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~l----- 1184 (1304)
T 2vsq_A 1117 FGYSAGCSLAFEAAKKLEEQGRI-VQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDN------EALNSEAV----- 1184 (1304)
T ss_dssp EEETTHHHHHHHHHHHHHHSSCC-EEEEEEESCCEECSCC-----CHHHHHHHHHTTCC-------------CTT-----
T ss_pred EEecCCchHHHHHHHHHHhCCCc-eeEEEEecCcccccccccccccchhhHHHHHHhhhhh------hhhcchhc-----
Confidence 99999999999998763 334 888998886543221100000 000000000000000 00000000
Q ss_pred HHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcc
Q 020630 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
.......+...+........ -..+++|++++.|+.|.. +.+....+.+.. ....+++.++| +|+
T Consensus 1185 ------------~~~~l~~~~~~~~~~~~~~~-~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~-~~~~~~~~v~G-~H~ 1248 (1304)
T 2vsq_A 1185 ------------KHGLKQKTHAFYSYYVNLIS-TGQVKADIDLLTSGADFD-IPEWLASWEEAT-TGVYRMKRGFG-THA 1248 (1304)
T ss_dssp ------------TGGGHHHHHHHHHHHHC------CBSSEEEEEECSSCCC-CCSSEECSSTTB-SSCCCEEECSS-CTT
T ss_pred ------------chHHHHHHHHHHHHHHHHhc-cCCcCCCEEEEEecCccc-cccchhhHHHHh-CCCeEEEEeCC-CHH
Confidence 00000111111111111111 156789999999998863 323223333333 23567888885 999
Q ss_pred ccccCCchhHHHHHHHHHHHHHH
Q 020630 291 LIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+++.+ ..+.+.+.|.+||.+
T Consensus 1249 ~ml~~~--~~~~~a~~l~~~L~~ 1269 (1304)
T 2vsq_A 1249 EMLQGE--TLDRNAEILLEFLNT 1269 (1304)
T ss_dssp GGGSHH--HHHHHHHHHHHHHHC
T ss_pred HHCCCH--HHHHHHHHHHHHHhc
Confidence 886433 456777888888763
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.81 E-value=4.2e-09 Score=88.73 Aligned_cols=124 Identities=15% Similarity=0.128 Sum_probs=77.9
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCc---c-hhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHH
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT---G-WMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~---~-~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~ 109 (323)
.|...+|.|.. .++.|+||++||.+... . +....++. ....|+.|+++|+| |++.+...... .....
T Consensus 85 cl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~-~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~ 162 (522)
T 1ukc_A 85 CLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQ-ASDDVIVFVTFNYRVGALGFLASEKVRQN-GDLNA 162 (522)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHH-HTTSCCEEEEECCCCHHHHHCCCHHHHHS-SCTTH
T ss_pred CCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHH-hcCCcEEEEEecccccccccccchhcccc-CCCCh
Confidence 45666777653 24569999999986421 1 11122222 12568999999999 44443211000 02234
Q ss_pred HHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCccC
Q 020630 110 VAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 110 ~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~~ 167 (323)
-..|..+++++++... +.+..+|.|+|+|.||..+..++... +.. ++++|+.++...
T Consensus 163 gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~l-f~~~i~~sg~~~ 226 (522)
T 1ukc_A 163 GLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGL-FIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSS-CSEEEEESCCCC
T ss_pred hHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCcccccc-chhhhhcCCCcC
Confidence 4567777777776642 34567899999999998776665543 455 899999888654
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=6.9e-07 Score=74.21 Aligned_cols=125 Identities=17% Similarity=0.109 Sum_probs=86.2
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCCCCcchhhHH--HHHHHhc-CCcEEEEeccccCcCCCCCC--------CCCCChH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQK--ICISYAT-WGYAVFAADLLGHGRSDGIR--------CYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~-~g~~vi~~d~~G~G~s~~~~--------~~~~~~~ 108 (323)
+.+|.+...-=. +.+|++|++.|=+ .....+.. +...+++ .|-.++.+++|-+|+|.+.. -...+.+
T Consensus 28 ~QRY~~n~~~~~~~~gPIfl~~gGEg-~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~e 106 (472)
T 4ebb_A 28 PQRFLVSDRFWVRGEGPIFFYTGNEG-DVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVE 106 (472)
T ss_dssp EEEEEEECTTCCTTTCCEEEEECCSS-CHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHH
T ss_pred EEEEEEecceeCCCCCcEEEEECCCc-cccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHH
Confidence 566665432111 2256666665533 32211111 2222333 36789999999999997421 1123889
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+..+|+..++++++.+......|++++|-|+||++|..+-.++|+. |.+.+..+++..
T Consensus 107 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l-v~ga~ASSApv~ 164 (472)
T 4ebb_A 107 QALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL-VAGALAASAPVL 164 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT-CSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe-EEEEEecccceE
Confidence 9999999999999988765567999999999999999999999999 888888776543
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.70 E-value=8.4e-09 Score=87.30 Aligned_cols=125 Identities=13% Similarity=0.037 Sum_probs=76.1
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCcc--hhh--HHHH-HHHh-cCCcEEEEeccccC--cCCCCCC-CCCCChH
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMF--QKIC-ISYA-TWGYAVFAADLLGH--GRSDGIR-CYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~--~~~~-~~l~-~~g~~vi~~d~~G~--G~s~~~~-~~~~~~~ 108 (323)
-|...+|.|.. .++.|+||++||.+.... ..+ ..++ +.++ ..|+.|+++|+|.- |.-.... .......
T Consensus 105 cl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n 184 (544)
T 1thg_A 105 CLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTN 184 (544)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CeEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCc
Confidence 45566777653 245699999999764321 122 2233 2333 24799999999942 1110000 0000112
Q ss_pred HHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--------CCCCeeEEEEccCcc
Q 020630 109 KVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~il~~~~~ 166 (323)
.-..|..+++++++.. .+.+..+|.|+|+|.||.++..++... +.. ++++|+.++..
T Consensus 185 ~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~l-f~~~i~~Sg~~ 252 (544)
T 1thg_A 185 AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKL-FHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEES-CSEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCcccccccccc-ccceEEecccc
Confidence 3356777777777654 234567899999999999888776642 344 89999988753
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.1e-08 Score=84.68 Aligned_cols=125 Identities=14% Similarity=0.026 Sum_probs=77.0
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCc---c-hhhHHHHH-HHh-cCCcEEEEeccccC--cCCCCCC-CCCCChH
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT---G-WMFQKICI-SYA-TWGYAVFAADLLGH--GRSDGIR-CYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~---~-~~~~~~~~-~l~-~~g~~vi~~d~~G~--G~s~~~~-~~~~~~~ 108 (323)
.|...+|.|.. .++.|+||++||.+... . +....++. .++ +.|+.|+++|+|.- |.-.... .......
T Consensus 97 cl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n 176 (534)
T 1llf_A 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGN 176 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCc
Confidence 46677787754 23569999999987432 2 11122332 232 35899999999942 2110000 0000122
Q ss_pred HHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--------CCCCeeEEEEccCcc
Q 020630 109 KVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~il~~~~~ 166 (323)
.-..|..+++++++.. .+.+..+|.|+|+|.||..+..++... +.. ++++|+.++..
T Consensus 177 ~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~l-f~~ai~~Sg~~ 244 (534)
T 1llf_A 177 AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPL-FRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEES-CSEEEEESCCS
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccch-hHhHhhhccCc
Confidence 3457778888887664 234567899999999998777665543 345 89999998754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.5e-06 Score=65.36 Aligned_cols=138 Identities=17% Similarity=0.128 Sum_probs=96.6
Q ss_pred CccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHH------------------HhcCCcEEE
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICIS------------------YATWGYAVF 87 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~------------------l~~~g~~vi 87 (323)
+.....++...++ .|+|+.+.... ...+|+||++.|.++.+. .+..+.+. +.+ -.+++
T Consensus 21 ~~~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS-~~g~~~E~GP~~~~~~~~~l~~N~~sW~~-~an~l 98 (300)
T 4az3_A 21 FRQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVL 98 (300)
T ss_dssp SCEEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSSCEEECTTCGGG-SSEEE
T ss_pred cceeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHhcCCCceecCCCccccccCccHHh-hhcch
Confidence 3445566777777 99999887543 345799999999988766 44433320 111 25789
Q ss_pred Eeccc-cCcCCCCCC-CCCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh---cCCCCeeEEEE
Q 020630 88 AADLL-GHGRSDGIR-CYLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ---SEPNTWTGLIF 161 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~-~~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~il 161 (323)
-+|.| |.|.|-... ....+..+.++|+..++...-...+ ....+++|.|-|+||..+-.+|.. .+...++++++
T Consensus 99 fiD~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~i 178 (300)
T 4az3_A 99 YLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAV 178 (300)
T ss_dssp EECCSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEE
T ss_pred hhcCCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCccccccee
Confidence 99977 888886433 2234677888888888876655543 346689999999999988887754 34445899999
Q ss_pred ccCccC
Q 020630 162 SAPLFV 167 (323)
Q Consensus 162 ~~~~~~ 167 (323)
.++..+
T Consensus 179 GNg~~d 184 (300)
T 4az3_A 179 GNGLSS 184 (300)
T ss_dssp ESCCSB
T ss_pred cCCccC
Confidence 988765
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=4.4e-08 Score=83.51 Aligned_cols=119 Identities=13% Similarity=0.162 Sum_probs=75.2
Q ss_pred cEEEEEecCCCC------CCceEEEEecCCCCCcc--hhhHHHHHHHhcC-CcEEEEeccc----cCcCCCCCCCCCCCh
Q 020630 41 KLFTQSFLPLDQ------KVKATVYMTHGYGSDTG--WMFQKICISYATW-GYAVFAADLL----GHGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~~------~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-g~~vi~~d~~----G~G~s~~~~~~~~~~ 107 (323)
-|...+|.|... +..|+||++||.+.... ..+.. ..|+++ |+.|+++||| |+..+... .. ..
T Consensus 111 cL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~-~~--~~ 185 (574)
T 3bix_A 111 CLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQ-AA--KG 185 (574)
T ss_dssp CCEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSS-SC--CC
T ss_pred CCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCC-CC--CC
Confidence 466667776531 34699999999764321 12221 235443 6999999999 33333211 11 11
Q ss_pred HHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhcC---CCCeeEEEEccCc
Q 020630 108 EKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPL 165 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~il~~~~ 165 (323)
..-..|..+++++++.. .+.+..+|.|+|+|.||.++..++.... .. ++++|+.++.
T Consensus 186 n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~gl-f~~aI~~Sg~ 248 (574)
T 3bix_A 186 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGL-FQRAIAQSGT 248 (574)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTS-CCEEEEESCC
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhH-HHHHHHhcCC
Confidence 23356777777777664 2345678999999999999988876543 34 7888887754
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5.1e-08 Score=83.29 Aligned_cols=112 Identities=10% Similarity=-0.111 Sum_probs=70.3
Q ss_pred CCceEEEEecCCCCC---cchhhHHHHHHHhc-CCcEEEEeccc----cCcCCCCC----CCCCCChHHHHhhHHHHHHH
Q 020630 53 KVKATVYMTHGYGSD---TGWMFQKICISYAT-WGYAVFAADLL----GHGRSDGI----RCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~---~~~~~~~~~~~l~~-~g~~vi~~d~~----G~G~s~~~----~~~~~~~~~~~~d~~~~i~~ 120 (323)
++.|+||++||.+.. .. ........|+. .|+.|+++++| |+...... .........-..|...++++
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~-~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSAT-LDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTT-CGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCC-CCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 346999999997632 21 11111234543 58999999999 44332100 00001122235678888888
Q ss_pred HHhhC---CCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCcc
Q 020630 121 VRHSE---PYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 121 l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~ 166 (323)
++... +.+..+|.|+|+|.||..+..++... ... ++++|+.++..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~l-f~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGL-VKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTS-CCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccch-hHhhhhhcccc
Confidence 87652 33567899999999999887776652 345 89999988754
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-07 Score=72.61 Aligned_cols=112 Identities=18% Similarity=0.151 Sum_probs=75.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEE-eccccCcCCCCCCCCCCChHHHHhhHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFA-ADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~ 119 (323)
.+.++++.+. ..+..||.+||... +.+.+.+.++.+.. .|.++. .....++...+..+.+++...++
T Consensus 62 ~~~~~v~~~~--~~~~iVva~RGT~~--------~~d~l~d~~~~~~~~~~~~~~--~~vh~Gf~~~~~~~~~~~~~~~~ 129 (269)
T 1tib_A 62 DVTGFLALDN--TNKLIVLSFRGSRS--------IENWIGNLNFDLKEINDICSG--CRGHDGFTSSWRSVADTLRQKVE 129 (269)
T ss_dssp TEEEEEEEET--TTTEEEEEECCCSC--------THHHHTCCCCCEEECTTTSTT--CEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEC--CCCEEEEEEeCCCC--------HHHHHHhcCeeeeecCCCCCC--CEecHHHHHHHHHHHHHHHHHHH
Confidence 6666666553 34789999999863 23456677787776 565542 11111222245667788889999
Q ss_pred HHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC--CeeEEEEccCcc
Q 020630 120 HVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLF 166 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~il~~~~~ 166 (323)
.+..+++ ..+++++||||||.+|..++...... .+..+++-+|..
T Consensus 130 ~~~~~~~--~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 130 DAVREHP--DYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHCT--TSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred HHHHHCC--CceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 8887765 56899999999999999999875421 266666666654
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.51 E-value=2.8e-07 Score=78.47 Aligned_cols=124 Identities=15% Similarity=0.039 Sum_probs=74.7
Q ss_pred cCCCcEEEEEecCCC----CCCceEEEEecCCCCCcchh--------hHHHHHHHhc-CCcEEEEeccc----cCcCCCC
Q 020630 37 TPNGKLFTQSFLPLD----QKVKATVYMTHGYGSDTGWM--------FQKICISYAT-WGYAVFAADLL----GHGRSDG 99 (323)
Q Consensus 37 ~~~g~l~~~~~~~~~----~~~~~~vv~~hG~~~~~~~~--------~~~~~~~l~~-~g~~vi~~d~~----G~G~s~~ 99 (323)
+.|. |...+|.|.. .++.|+||++||.+...... +......|+. .|+.|++++|| |+..+..
T Consensus 77 sedc-l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~ 155 (579)
T 2bce_A 77 NEDC-LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD 155 (579)
T ss_dssp CSCC-CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS
T ss_pred CCCC-CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCC
Confidence 3444 5555666542 23569999999986321100 0001233443 37999999999 4443321
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCc
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~ 165 (323)
.. . .-..-..|...++++++.. .+.+..+|.|+|+|.||.++..++.. .... ++++|+.++.
T Consensus 156 ~~-~--pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~l-f~~ai~~Sg~ 222 (579)
T 2bce_A 156 SN-L--PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGL-IKRAISQSGV 222 (579)
T ss_dssp TT-C--CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTT-CSEEEEESCC
T ss_pred CC-C--CCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhH-HHHHHHhcCC
Confidence 11 1 1111245667777777654 23456789999999999999877654 3445 8899988764
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.38 E-value=4.9e-06 Score=69.11 Aligned_cols=126 Identities=16% Similarity=0.121 Sum_probs=86.8
Q ss_pred C-cEEEEEecCC---CCCCceEEEEecCCCCCcchhhHHHHH-----------------HHhcCCcEEEEecc-ccCcCC
Q 020630 40 G-KLFTQSFLPL---DQKVKATVYMTHGYGSDTGWMFQKICI-----------------SYATWGYAVFAADL-LGHGRS 97 (323)
Q Consensus 40 g-~l~~~~~~~~---~~~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~l~~~g~~vi~~d~-~G~G~s 97 (323)
+ .++|+.+... +...+|++|+++|.++.++ .+..+.+ .+.+. .+++-+|. .|.|.|
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sw~~~-~n~lfiDqPvGtGfS 125 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISK-GDLLFIDQPTGTGFS 125 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGT-SEEEEECCSTTSTTC
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHh-hhhhHhhcCCeEecCCCceeecccchhhc-CCeEEEecCCCcccc
Confidence 5 8998888654 2355899999999988776 4433221 12222 68999997 699988
Q ss_pred CCCCC---------CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh-----------cCCCCe
Q 020630 98 DGIRC---------YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ-----------SEPNTW 156 (323)
Q Consensus 98 ~~~~~---------~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~-----------~p~~~v 156 (323)
-.... ...+.++.++|+..+++..-...+ ....+++|.|+|+||..+..+|.. .+..++
T Consensus 126 y~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inL 205 (483)
T 1ac5_A 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred CCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccce
Confidence 64321 223677888898888887655543 235689999999999988877743 122348
Q ss_pred eEEEEccCccC
Q 020630 157 TGLIFSAPLFV 167 (323)
Q Consensus 157 ~~~il~~~~~~ 167 (323)
+++++.++..+
T Consensus 206 kGi~IGNg~~d 216 (483)
T 1ac5_A 206 KALLIGNGWID 216 (483)
T ss_dssp EEEEEEEECCC
T ss_pred eeeEecCCccc
Confidence 99988877654
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.5e-05 Score=60.27 Aligned_cols=127 Identities=19% Similarity=0.151 Sum_probs=83.1
Q ss_pred CCC-cEEEEEecC-C-CCCCceEEEEecCCCCCcchhh-HHHHH------------------HHhcCCcEEEEecc-ccC
Q 020630 38 PNG-KLFTQSFLP-L-DQKVKATVYMTHGYGSDTGWMF-QKICI------------------SYATWGYAVFAADL-LGH 94 (323)
Q Consensus 38 ~~g-~l~~~~~~~-~-~~~~~~~vv~~hG~~~~~~~~~-~~~~~------------------~l~~~g~~vi~~d~-~G~ 94 (323)
..| .++|+.+.. . +...+|+||+++|.++.++ .+ ..+.+ .+.+ -.+++-+|. .|.
T Consensus 34 ~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~-~anllfiDqPvGt 111 (270)
T 1gxs_A 34 NNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSS-IGLGAMQELGAFRVHTNGESLLLNEYAWNK-AANILFAESPAGV 111 (270)
T ss_dssp TTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCT-TTTHHHHTTSSEEECTTSSCEEECTTCGGG-TSEEEEECCSTTS
T ss_pred CCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccc-hhhhhHHhccCceecCCCCcceeCccchhc-cccEEEEeccccc
Confidence 346 899988876 3 2345899999999988776 43 43331 0122 268999995 599
Q ss_pred cCCCCCCC--CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh---c---CCCCeeEEEEccCc
Q 020630 95 GRSDGIRC--YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ---S---EPNTWTGLIFSAPL 165 (323)
Q Consensus 95 G~s~~~~~--~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~---~---p~~~v~~~il~~~~ 165 (323)
|.|-.... ...+-++.++|+..+++..-.+.+ ....+++|.|.| |-++...+... . +...++++++.++.
T Consensus 112 GfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~ 190 (270)
T 1gxs_A 112 GFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGL 190 (270)
T ss_dssp TTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCC
T ss_pred cccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCc
Confidence 98864322 223456678888888887666543 335689999999 65544333222 1 12348999999988
Q ss_pred cC
Q 020630 166 FV 167 (323)
Q Consensus 166 ~~ 167 (323)
.+
T Consensus 191 ~d 192 (270)
T 1gxs_A 191 TN 192 (270)
T ss_dssp CB
T ss_pred cC
Confidence 75
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=7.9e-08 Score=94.43 Aligned_cols=94 Identities=14% Similarity=0.244 Sum_probs=0.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++++++|+.++... .|..+++.|. ..|+.+.++|. . ...++++++++..+.+..+.. ..++.+
T Consensus 2242 ~~~Lfc~~~agG~~~-~y~~l~~~l~---~~v~~lq~pg~-----~--~~~~i~~la~~~~~~i~~~~p-----~gpy~L 2305 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSIT-VFHGLAAKLS---IPTYGLQCTGA-----A--PLDSIQSLASYYIECIRQVQP-----EGPYRI 2305 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHH-HHHHHHHhhC---CcEEEEecCCC-----C--CCCCHHHHHHHHHHHHHHhCC-----CCCEEE
Confidence 578999999987765 7888887773 68888888871 1 112677888777777766543 237999
Q ss_pred EEechhHHHHHHHHhhcCCC--Cee---EEEEccC
Q 020630 135 FGESMGGAATMLMYFQSEPN--TWT---GLIFSAP 164 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~--~v~---~~il~~~ 164 (323)
+||||||.+|.++|.+-... .+. .++++++
T Consensus 2306 ~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2306 AGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------------
T ss_pred EEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 99999999999998763221 143 5667665
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.28 E-value=8.7e-06 Score=62.70 Aligned_cols=87 Identities=17% Similarity=0.089 Sum_probs=56.6
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
.+..||.+||.... .+.+.+.++.+...|....+.. ..++...+..+.+++.+.++.+..+++ ..+++
T Consensus 73 ~~~iVvafRGT~~~--------~d~~~d~~~~~~~~~~~~~~~v--h~Gf~~~~~~~~~~~~~~l~~~~~~~p--~~~i~ 140 (279)
T 1tia_A 73 NSAVVLAFRGSYSV--------RNWVADATFVHTNPGLCDGCLA--ELGFWSSWKLVRDDIIKELKEVVAQNP--NYELV 140 (279)
T ss_pred CCEEEEEEeCcCCH--------HHHHHhCCcEeecCCCCCCCcc--ChhHHHHHHHHHHHHHHHHHHHHHHCC--CCeEE
Confidence 47799999998632 2234444566655554211111 122222455666778888888776655 56899
Q ss_pred EEEechhHHHHHHHHhhcC
Q 020630 134 LFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p 152 (323)
++||||||.+|..++....
T Consensus 141 vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 141 VVGHSLGAAVATLAATDLR 159 (279)
T ss_pred EEecCHHHHHHHHHHHHHH
Confidence 9999999999999888754
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-05 Score=61.21 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=44.9
Q ss_pred CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc
Q 020630 83 GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 83 g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
++.+...++||........+....+..+.+++.+.++.+..+++ ..+++++||||||.+|..++...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p--~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYP--SYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCC--CceEEEEeeCHHHHHHHHHHHHH
Confidence 36677778887422211122222456667777777777765543 45799999999999999988765
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-05 Score=58.87 Aligned_cols=85 Identities=16% Similarity=0.181 Sum_probs=51.5
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+..||.++|...... | +.+..+ ...++++........++...+..+.+++...++.+..+++ ..++++
T Consensus 74 ~~ivvafRGT~~~~d--~------~~d~~~--~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~--~~~i~v 141 (269)
T 1lgy_A 74 KTIYLVFRGTNSFRS--A------ITDIVF--NFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHP--TYKVIV 141 (269)
T ss_dssp TEEEEEEECCSCCHH--H------HHTCCC--CEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEE
T ss_pred CEEEEEEeCCCcHHH--H------HhhcCc--ccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCC--CCeEEE
Confidence 679999999843222 2 222212 2334443211100111111355666788888888777665 568999
Q ss_pred EEechhHHHHHHHHhhc
Q 020630 135 FGESMGGAATMLMYFQS 151 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~ 151 (323)
.||||||.+|..++...
T Consensus 142 tGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 142 TGHSLGGAQALLAGMDL 158 (269)
T ss_dssp EEETHHHHHHHHHHHHH
T ss_pred eccChHHHHHHHHHHHH
Confidence 99999999999888765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00025 Score=53.07 Aligned_cols=104 Identities=14% Similarity=0.077 Sum_probs=68.4
Q ss_pred CceEEEEecCCCCCc--c-hhhHHHHHHHhcCCcEEEEe-ccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCC
Q 020630 54 VKATVYMTHGYGSDT--G-WMFQKICISYATWGYAVFAA-DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~--~-~~~~~~~~~l~~~g~~vi~~-d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 129 (323)
++|+||+.+|.+... . .....+++.|.++ +.+-.+ +||-... .+..+..+=++++...++....+.+ .
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA~~~-----~y~~S~~~G~~~~~~~i~~~~~~CP--~ 73 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPAAAF-----PMWPSVEKGVAELILQIELKLDADP--Y 73 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCCCSS-----SCHHHHHHHHHHHHHHHHHHHHHCT--T
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccCccc-----CccchHHHHHHHHHHHHHHHHhhCC--C
Confidence 479999999997641 1 1345677767554 555444 3553221 1111345556777777777777766 6
Q ss_pred CCEEEEEechhHHHHHHHHhhc-----------CCCCeeEEEEccCcc
Q 020630 130 LPAFLFGESMGGAATMLMYFQS-----------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~-----------p~~~v~~~il~~~~~ 166 (323)
.+++|+|+|.|+.++-.++... .++ |.++++++-+.
T Consensus 74 tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~-V~avvlfGdP~ 120 (254)
T 3hc7_A 74 ADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHR-LKKVIFWGNPM 120 (254)
T ss_dssp CCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGG-EEEEEEESCTT
T ss_pred CeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhh-EEEEEEEeCCC
Confidence 7999999999999998876541 234 89999887543
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0013 Score=49.80 Aligned_cols=56 Identities=20% Similarity=0.174 Sum_probs=37.5
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh----cCCCCeeEEEEccC
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ----SEPNTWTGLIFSAP 164 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~il~~~ 164 (323)
+....+++.+.++.+..+++ ..++++.|||+||.+|..++.. .|...+.....-+|
T Consensus 103 ~~~~~~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 162 (258)
T 3g7n_A 103 WSAVHDTIITEVKALIAKYP--DYTLEAVGHSLGGALTSIAHVALAQNFPDKSLVSNALNAF 162 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHST--TCEEEEEEETHHHHHHHHHHHHHHHHCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCeEEEeccCHHHHHHHHHHHHHHHhCCCCceeEEEecCC
Confidence 34445566677777766655 5689999999999999887764 44432544444444
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00051 Score=52.27 Aligned_cols=56 Identities=21% Similarity=0.204 Sum_probs=38.8
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccC
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAP 164 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~ 164 (323)
+..+.+++.+.++.+..+++ ..++++.|||+||.+|..++... +..+|..+..-+|
T Consensus 104 ~~~~~~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~~~tFg~P 161 (261)
T 1uwc_A 104 WISVQDQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHCC--CceEEEEecCHHHHHHHHHHHHHhccCCCeEEEEecCC
Confidence 44455677777887777665 56899999999999999888763 2222764444444
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0059 Score=43.67 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=65.7
Q ss_pred EEEEecCCCCCcc--h----hhHHHHHHHhcCCcEEEEe--ccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCC
Q 020630 57 TVYMTHGYGSDTG--W----MFQKICISYATWGYAVFAA--DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYR 128 (323)
Q Consensus 57 ~vv~~hG~~~~~~--~----~~~~~~~~l~~~g~~vi~~--d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 128 (323)
.||+..|.+.... . ....+...+......|..+ +||-.-..... ...+..+-+.++...|+....+.+
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~--~~~S~~~G~~~~~~~i~~~~~~CP-- 95 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNAL--PRGTSSAAIREMLGLFQQANTKCP-- 95 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGS--TTSSCHHHHHHHHHHHHHHHHHCT--
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccC--ccccHHHHHHHHHHHHHHHHHhCC--
Confidence 5566666543311 0 2223333443234677888 78753211000 111455667888888888888776
Q ss_pred CCCEEEEEechhHHHHHHHHhhcC----CCCeeEEEEccCc
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAPL 165 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~il~~~~ 165 (323)
..+++|+|+|.|+.++-.++..-| ++ |.++++++-+
T Consensus 96 ~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~-V~avvlfGdP 135 (197)
T 3qpa_A 96 DATLIAGGYXQGAALAAASIEDLDSAIRDK-IAGTVLFGYT 135 (197)
T ss_dssp TCEEEEEEETHHHHHHHHHHHHSCHHHHTT-EEEEEEESCT
T ss_pred CCcEEEEecccccHHHHHHHhcCCHhHHhh-eEEEEEeeCC
Confidence 679999999999999988776654 45 9999998744
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00096 Score=46.03 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=50.7
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcC----------------------CCCcEEEecCCCccccccCCchhHHHHHH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS----------------------ADKSIKIYDGMYHSLIQGEPDENANLVLK 305 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 305 (323)
..++|+.+|+.|.+++.-..+.+.+.+.- .+.++..+.++||+...++| +...+
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP----~~a~~ 139 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRP----RQALV 139 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSH----HHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCH----HHHHH
Confidence 58999999999999999999988888731 15778899999999996555 56777
Q ss_pred HHHHHHHH
Q 020630 306 DMREWIDE 313 (323)
Q Consensus 306 ~i~~fl~~ 313 (323)
.+..||..
T Consensus 140 m~~~fl~~ 147 (153)
T 1whs_B 140 LFQYFLQG 147 (153)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHCC
Confidence 78888764
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00077 Score=52.57 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=38.2
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc---CCCCeeEEEEccCc
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPL 165 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~ 165 (323)
+..+.+++...++.+..+++ ..++++.|||+||.+|..++... ... +..+.+-+|.
T Consensus 115 ~~~i~~~l~~~l~~~~~~~p--~~~i~vtGHSLGGAlA~L~a~~l~~~~~~-v~~~TFG~Pr 173 (319)
T 3ngm_A 115 WNEISAAATAAVAKARKANP--SFKVVSVGHSLGGAVATLAGANLRIGGTP-LDIYTYGSPR 173 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSST--TCEEEEEEETHHHHHHHHHHHHHHHTTCC-CCEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhhCC--CCceEEeecCHHHHHHHHHHHHHHhcCCC-ceeeecCCCC
Confidence 44555677777777776655 56899999999999999877652 222 5544444443
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0077 Score=43.83 Aligned_cols=108 Identities=16% Similarity=0.102 Sum_probs=65.4
Q ss_pred eEEEEecCCCCCcc-hhhHHHHHHHhcC--CcEEEEeccccC-cCCCC-CCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 56 ATVYMTHGYGSDTG-WMFQKICISYATW--GYAVFAADLLGH-GRSDG-IRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 56 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~vi~~d~~G~-G~s~~-~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
-.||+..|.+.... -....+.+.|.++ |-.+..++||-. |.+.. ...+..+..+=++++...|+....+.+ ..
T Consensus 5 v~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP--~t 82 (207)
T 1g66_A 5 IHVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCP--ST 82 (207)
T ss_dssp EEEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHST--TC
T ss_pred EEEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCC--CC
Confidence 35677777764421 0123455555432 447888898863 22110 011111334456777788887777776 77
Q ss_pred CEEEEEechhHHHHHHHHhh--------------cC----CCCeeEEEEccCcc
Q 020630 131 PAFLFGESMGGAATMLMYFQ--------------SE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~--------------~p----~~~v~~~il~~~~~ 166 (323)
+++|+|+|.|+.++-.++.. .| ++ |.++++++-+.
T Consensus 83 kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-V~avvlfGdP~ 135 (207)
T 1g66_A 83 KIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNM-VKAAIFMGDPM 135 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHH-EEEEEEESCTT
T ss_pred cEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhcc-EEEEEEEcCCC
Confidence 99999999999999877641 11 33 88888887543
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0017 Score=49.86 Aligned_cols=42 Identities=14% Similarity=0.278 Sum_probs=30.8
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+....+++...++.+..+++ ..++.+.|||+||.+|..+|..
T Consensus 117 ~~~~~~~~~~~l~~~~~~~p--~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 117 YNDLMDDIFTAVKKYKKEKN--EKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--CCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEcccCHHHHHHHHHHHH
Confidence 34455566666666665544 5689999999999999988764
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0059 Score=47.06 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=56.1
Q ss_pred HHHHHhcCCcEEEEeccccCcCCC----CCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 75 ICISYATWGYAVFAADLLGHGRSD----GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 75 ~~~~l~~~g~~vi~~d~~G~G~s~----~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+...+......++.++|+-.-... ....+..+..+=++++...|+....+.+ ..+++|+|+|.|+.++-.++..
T Consensus 76 L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP--~TkiVL~GYSQGA~V~~~~~~~ 153 (302)
T 3aja_A 76 LAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCP--LTSYVIAGFSQGAVIAGDIASD 153 (302)
T ss_dssp HHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCC--CCcEEEEeeCchHHHHHHHHHh
Confidence 333343334667888887542210 0011111344445677777777777766 6799999999999998877642
Q ss_pred --------cCCCCeeEEEEccCcc
Q 020630 151 --------SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 151 --------~p~~~v~~~il~~~~~ 166 (323)
.+++ |.++++++-..
T Consensus 154 i~~g~~~~~~~~-V~aVvLfGdP~ 176 (302)
T 3aja_A 154 IGNGRGPVDEDL-VLGVTLIADGR 176 (302)
T ss_dssp HHTTCSSSCGGG-EEEEEEESCTT
T ss_pred ccCCCCCCChHH-EEEEEEEeCCC
Confidence 2344 99999987443
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.015 Score=41.76 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=54.1
Q ss_pred CcEEEEe--ccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC----CCCe
Q 020630 83 GYAVFAA--DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE----PNTW 156 (323)
Q Consensus 83 g~~vi~~--d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v 156 (323)
...|..+ +||-.-..... ...+..+-+.++...|+....+.+ ..+++|+|+|.|+.++-.++..-| ++ |
T Consensus 60 ~v~v~~V~~~YpA~~~~~~~--~~~S~~~G~~~~~~~i~~~~~~CP--~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~-V 134 (201)
T 3dcn_A 60 DVWVQGVGGPYLADLASNFL--PDGTSSAAINEARRLFTLANTKCP--NAAIVSGGYSQGTAVMAGSISGLSTTIKNQ-I 134 (201)
T ss_dssp GEEEEECCTTCCCCSGGGGS--TTSSCHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHTTSCHHHHHH-E
T ss_pred ceEEEEeCCCccccCCcccc--cCCCHHHHHHHHHHHHHHHHHhCC--CCcEEEEeecchhHHHHHHHhcCChhhhhh-e
Confidence 3678888 67743211000 011455667788888888888776 779999999999999988776544 34 8
Q ss_pred eEEEEccCc
Q 020630 157 TGLIFSAPL 165 (323)
Q Consensus 157 ~~~il~~~~ 165 (323)
.++++++-+
T Consensus 135 ~avvlfGdP 143 (201)
T 3dcn_A 135 KGVVLFGYT 143 (201)
T ss_dssp EEEEEETCT
T ss_pred EEEEEeeCc
Confidence 899988744
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.012 Score=42.89 Aligned_cols=108 Identities=14% Similarity=0.035 Sum_probs=65.4
Q ss_pred eEEEEecCCCCCcc-hhhHHHHHHHhcC--CcEEEEeccccCc-CCCC-CCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 56 ATVYMTHGYGSDTG-WMFQKICISYATW--GYAVFAADLLGHG-RSDG-IRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 56 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~--g~~vi~~d~~G~G-~s~~-~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
-.||+..|.+.... -....+.+.|.++ |-.+..++||-.. .+.. ...+..+..+=++++...|+....+.+ ..
T Consensus 5 v~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP--~t 82 (207)
T 1qoz_A 5 IHVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCP--DT 82 (207)
T ss_dssp EEEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCT--TS
T ss_pred eEEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCC--CC
Confidence 35777777765421 0123455555443 4478888888642 2110 011111334445777777887777776 77
Q ss_pred CEEEEEechhHHHHHHHHhh--------------cC----CCCeeEEEEccCcc
Q 020630 131 PAFLFGESMGGAATMLMYFQ--------------SE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~--------------~p----~~~v~~~il~~~~~ 166 (323)
+++|+|+|.|+.++-.++.. .| ++ |.++++++-+.
T Consensus 83 kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-V~avvlfGdP~ 135 (207)
T 1qoz_A 83 QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSA-VKAAIFMGDPR 135 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHH-EEEEEEESCTT
T ss_pred cEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhcc-EEEEEEEcCCc
Confidence 99999999999999877641 11 23 88888887543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.017 Score=40.95 Aligned_cols=78 Identities=15% Similarity=0.096 Sum_probs=52.7
Q ss_pred CcEEEEec--cccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC----CCCe
Q 020630 83 GYAVFAAD--LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE----PNTW 156 (323)
Q Consensus 83 g~~vi~~d--~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v 156 (323)
...|..++ |+-.-....... .+...-++++..+++....+.+ ..+++|+|+|.|+.++-.++..-| ++ |
T Consensus 48 ~v~v~~V~~~YpA~~~~~~~~~--~s~~~g~~~~~~~i~~~~~~CP--~tkivl~GYSQGA~V~~~~~~~l~~~~~~~-V 122 (187)
T 3qpd_A 48 DVACQGVGPRYTADLPSNALPE--GTSQAAIAEAQGLFEQAVSKCP--DTQIVAGGYSQGTAVMNGAIKRLSADVQDK-I 122 (187)
T ss_dssp CEEEEECCSSCCCCGGGGGSTT--SSCHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHTTSCHHHHHH-E
T ss_pred CceEEeeCCcccCcCccccccc--cchhHHHHHHHHHHHHHHHhCC--CCcEEEEeeccccHHHHhhhhcCCHhhhhh-E
Confidence 46788888 874321000000 1334556777778777777766 679999999999999988776544 34 8
Q ss_pred eEEEEccCc
Q 020630 157 TGLIFSAPL 165 (323)
Q Consensus 157 ~~~il~~~~ 165 (323)
.++++++-+
T Consensus 123 ~avvlfGdP 131 (187)
T 3qpd_A 123 KGVVLFGYT 131 (187)
T ss_dssp EEEEEESCT
T ss_pred EEEEEeeCC
Confidence 999988744
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.018 Score=41.69 Aligned_cols=99 Identities=18% Similarity=0.151 Sum_probs=65.4
Q ss_pred eEEEEecCCCCCcc--hhhHHHHHH-HhcC-CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 56 ATVYMTHGYGSDTG--WMFQKICIS-YATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 56 ~~vv~~hG~~~~~~--~~~~~~~~~-l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
-.||+..|.+.... .....+... |... |-....++||-.- .+. + .+-++++...|+....+.+ ..+
T Consensus 9 v~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~------~y~-S-~~G~~~~~~~i~~~~~~CP--~tk 78 (205)
T 2czq_A 9 YVLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADF------SQN-S-AAGTADIIRRINSGLAANP--NVC 78 (205)
T ss_dssp EEEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCT------TCC-C-HHHHHHHHHHHHHHHHHCT--TCE
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccC------CCc-C-HHHHHHHHHHHHHHHhhCC--CCc
Confidence 45667777654421 123455555 5443 3355777777421 122 4 6667888888888877776 779
Q ss_pred EEEEEechhHHHHHHHHhhc--C----CCCeeEEEEccCc
Q 020630 132 AFLFGESMGGAATMLMYFQS--E----PNTWTGLIFSAPL 165 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~--p----~~~v~~~il~~~~ 165 (323)
++|+|+|.|+.++-.++... + ++ |.++++++-+
T Consensus 79 ivl~GYSQGA~V~~~~~~~lg~~~~~~~~-V~avvlfGdP 117 (205)
T 2czq_A 79 YILQGYSQGAAATVVALQQLGTSGAAFNA-VKGVFLIGNP 117 (205)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSSSHHHHH-EEEEEEESCT
T ss_pred EEEEeeCchhHHHHHHHHhccCChhhhhh-EEEEEEEeCC
Confidence 99999999999988776543 3 24 8999988743
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0018 Score=50.21 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=30.2
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
....+.+...++.+..+++ ..++.+.|||+||.+|..+|..
T Consensus 134 ~~~~~~i~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 134 NNTYNQIGPKLDSVIEQYP--DYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHHHH
Confidence 3344556666666665554 5689999999999999988865
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=95.41 E-value=0.041 Score=37.99 Aligned_cols=62 Identities=10% Similarity=0.156 Sum_probs=47.9
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcC---------------------------CCCcEEEecCCCccccccCCchhH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS---------------------------ADKSIKIYDGMYHSLIQGEPDENA 300 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~~~~~~~~~ 300 (323)
.+++|+..|..|.+++.-..+.+.+.+.- .+.++..+.++||+...++|
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP---- 138 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKP---- 138 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCH----
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCH----
Confidence 67999999999999999888888877621 12346777899999996666
Q ss_pred HHHHHHHHHHHHH
Q 020630 301 NLVLKDMREWIDE 313 (323)
Q Consensus 301 ~~~~~~i~~fl~~ 313 (323)
+...+.+.+||..
T Consensus 139 ~~al~m~~~fl~g 151 (155)
T 4az3_B 139 LAAFTMFSRFLNK 151 (155)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 5577778888753
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.015 Score=46.04 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+.++......+ ..++++.|||+||.+|..+|..
T Consensus 152 l~~~l~~~~~~~~--~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 152 ILQFLNEKIGPEG--KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp HHHHHHHHHCTTC--CEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccC--CceEEEecCChHHHHHHHHHHH
Confidence 4444544433221 4589999999999999988764
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.01 E-value=0.072 Score=36.86 Aligned_cols=62 Identities=11% Similarity=0.111 Sum_probs=48.0
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcC-------------------------CCCcEEEecCCCccccccCCchhHHH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS-------------------------ADKSIKIYDGMYHSLIQGEPDENANL 302 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~ 302 (323)
..++|+.+|+.|.+++.-..+.+.+.+.- .+.++..+.++||+....+| +.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP----~~ 141 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRP----AQ 141 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCH----HH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCc----HH
Confidence 58999999999999999888888877621 12346778899999986555 55
Q ss_pred HHHHHHHHHHH
Q 020630 303 VLKDMREWIDE 313 (323)
Q Consensus 303 ~~~~i~~fl~~ 313 (323)
..+.+.+|+..
T Consensus 142 al~m~~~fl~g 152 (158)
T 1gxs_B 142 AFLLFKQFLKG 152 (158)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 77778888764
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.53 E-value=0.014 Score=47.09 Aligned_cols=39 Identities=15% Similarity=0.140 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+.+.|+.+..+++....++++.|||+||.+|..+|..
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~ 248 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATD 248 (419)
Confidence 334444444444332112479999999999999988865
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.74 E-value=0.22 Score=41.56 Aligned_cols=62 Identities=5% Similarity=-0.015 Sum_probs=48.2
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhc---------C--------------------------CCCcEEEecCCCcccc
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKAS---------S--------------------------ADKSIKIYDGMYHSLI 292 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------~--------------------------~~~~~~~~~~~gH~~~ 292 (323)
.++|||.+|+.|.+++.-..+.+.+.+. . .+.++..+.++||+..
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 5899999999999999988888777663 0 1235667889999999
Q ss_pred ccCCchhHHHHHHHHHHHHHH
Q 020630 293 QGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~~ 313 (323)
..+| +.....+..||..
T Consensus 452 ~dqP----~~al~m~~~fl~~ 468 (483)
T 1ac5_A 452 FDKS----LVSRGIVDIYSND 468 (483)
T ss_dssp HHCH----HHHHHHHHHHTTC
T ss_pred chhH----HHHHHHHHHHHCC
Confidence 6555 6677888888864
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=89.61 E-value=0.71 Score=38.15 Aligned_cols=61 Identities=10% Similarity=0.152 Sum_probs=47.5
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcC---------------------------CCCcEEEecCCCccccccCCchhH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS---------------------------ADKSIKIYDGMYHSLIQGEPDENA 300 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~~~~~~~~~ 300 (323)
.+++|+.+|+.|.+++.-..+.+.+.+.- .+.++..+.++||+....+|
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP---- 436 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKP---- 436 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCH----
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccCh----
Confidence 58999999999999999888888877630 12345678899999986555
Q ss_pred HHHHHHHHHHHH
Q 020630 301 NLVLKDMREWID 312 (323)
Q Consensus 301 ~~~~~~i~~fl~ 312 (323)
+...+.+..|+.
T Consensus 437 ~~al~m~~~fl~ 448 (452)
T 1ivy_A 437 LAAFTMFSRFLN 448 (452)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 557777777775
|
| >3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B* | Back alignment and structure |
|---|
Probab=86.07 E-value=0.76 Score=33.57 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=39.3
Q ss_pred EEEeccccCcCCCCCCC--CCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhH
Q 020630 86 VFAADLLGHGRSDGIRC--YLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGG 141 (323)
Q Consensus 86 vi~~d~~G~G~s~~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg 141 (323)
-+.+-+-|||++..... ..++.++++..+..+.+.+......+..++.|+|.||-+
T Consensus 102 kiRwqlVGHGr~e~n~~~fag~sadeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~s 159 (254)
T 3pa8_A 102 KIKLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMFS 159 (254)
T ss_dssp EEEEEEECCCCSSCCSSEETTEEHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCCC
T ss_pred ceEEEEEecCcCCCCcceeccCCHHHHHHHHHHHHHHHhhccCCCCceEEEEeecccC
Confidence 47777889999865432 124788999999999998887543222347888888653
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=81.09 E-value=2 Score=35.80 Aligned_cols=64 Identities=19% Similarity=0.180 Sum_probs=41.5
Q ss_pred ccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccccc-----CCc---hhHHHHHHHHHHHHHHHHhh
Q 020630 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG-----EPD---ENANLVLKDMREWIDERVER 317 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~---~~~~~~~~~i~~fl~~~~~~ 317 (323)
..+++++|+.|+....... +. .++....++++|+.|+.-+. +|. +..+.+.+.|.+||++.-..
T Consensus 382 sniiF~nG~~DPW~~~gv~----~~-~s~~~~~~~I~g~~Hc~Dl~~~~~~Dp~~l~~ar~~~~~~i~~Wl~~~~~~ 453 (472)
T 4ebb_A 382 SNIIFSNGNLDPWAGGGIR----RN-LSASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWVKAARRE 453 (472)
T ss_dssp CSEEEEEETTCTTGGGSCC----SC-CSSSEEEEEETTCCTTGGGSCCCTTCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CeEEEECCCcCCCcCccCC----CC-CCCCceEEEeCcCeeeccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4799999999998543321 11 12456678899999987653 232 24566777888888765433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 323 | ||||
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 8e-17 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 1e-11 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 9e-11 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 4e-10 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 2e-09 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 5e-09 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 1e-08 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 5e-08 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 5e-08 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 8e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-07 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 5e-07 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 6e-07 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 1e-06 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-06 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 1e-06 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 3e-06 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 4e-06 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 4e-06 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-05 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 3e-05 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 4e-05 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 1e-04 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 4e-04 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 4e-04 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 5e-04 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 0.001 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 0.002 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 77.3 bits (189), Expect = 8e-17
Identities = 30/289 (10%), Positives = 70/289 (24%), Gaps = 36/289 (12%)
Query: 32 KEYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFA 88
NG +L P + T+ + G+ + +T G+ VF
Sbjct: 6 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF-AGLAEYLSTNGFHVFR 64
Query: 89 ADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMY 148
D L H M S + + ++ L S+ +
Sbjct: 65 YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQ---NIGLIAASLSARVAYEV- 120
Query: 149 FQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208
+ LI + + + + ++ + ++ + L + ++D
Sbjct: 121 --ISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDC 178
Query: 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268
+ + D + +VP + D
Sbjct: 179 FEHHWDTLD---------------------STLDKVANTSVPLIAFTANNDDWVKQEEVY 217
Query: 269 LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
+ + + G H L EN ++ + +
Sbjct: 218 DMLAHIRTGHCKLYSLLGSSHDLG-----ENLVVLRNFYQSVTKAAIAM 261
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 62.7 bits (151), Expect = 1e-11
Identities = 35/290 (12%), Positives = 66/290 (22%), Gaps = 50/290 (17%)
Query: 33 EYFETPNGKLFTQSFL--PLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAAD 90
E E + ++ P V M G S T ++ G A D
Sbjct: 107 ERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLES-TKEESFQMENLVLDRGMATATFD 165
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150
G G + GD EK ++ + + + G S+GG +
Sbjct: 166 GPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDA---IGVLGRSLGGNYALKSAAC 222
Query: 151 SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210
+ P + Y
Sbjct: 223 EPRLAACISWGGFSDLDYWDLETPLTKESWKYVS-------------------------- 256
Query: 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
+ R +D S++ P +HG D V + +
Sbjct: 257 ------------KVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVP-LSFVDTV 303
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERCGP 320
E + ++ + H +M +W+ + +
Sbjct: 304 LELVPAEHLNLVVEKDGDHCCH-----NLGIRPRLEMADWLYDVLVAGKK 348
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 59.4 bits (142), Expect = 9e-11
Identities = 46/326 (14%), Positives = 97/326 (29%), Gaps = 39/326 (11%)
Query: 1 MPQETQPETPPNYWG------------YMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSF 47
P++T P+ +W + Y + GV+ + +++ ++
Sbjct: 15 KPEKTAPKDFSEFWKLSLEELAKVQAEPDLQPVDYPADGVKVYRLTYKSFGNARITGWYA 74
Query: 48 LPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107
+P + + HGY + ++ +++A GYA F + G RS+
Sbjct: 75 VPDKEGPHPAIVKYHGYNASYDGEIHEM-VNWALHGYATFGMLVRGQQRSED-------- 125
Query: 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167
+ S ++ D + + A L S I +
Sbjct: 126 ---TSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIG---VTG 179
Query: 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
+ + + + + + + + + L++ ++ R G P
Sbjct: 180 GSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQPYLEI--NSFFRRNGSPET 237
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287
I + +V VP L G D VT P++ Y K +K+Y
Sbjct: 238 EVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHL-ETKKELKVYRYF 296
Query: 288 YHSLIQGEPDENANLVLKDMREWIDE 313
H I E + +
Sbjct: 297 GHEYIPAFQTE--------KLAFFKQ 314
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 57.2 bits (136), Expect = 4e-10
Identities = 34/259 (13%), Positives = 83/259 (32%), Gaps = 30/259 (11%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
+ V + HG+ + + + GY A GHG + G +
Sbjct: 11 ERAVLLLHGFTG-NSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQD-- 67
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ + G S+GG ++ + + P
Sbjct: 68 --VMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGY----------------------TVP 103
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ + M ++ ++ + + K K + + + T++ +
Sbjct: 104 IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQ 163
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
+ ++D+ + P V D + P S+ ++Y + S K IK Y+ H +
Sbjct: 164 ELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITL- 222
Query: 295 EPDENANLVLKDMREWIDE 313
D+ + + +D+ +++
Sbjct: 223 --DQEKDQLHEDIYAFLES 239
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 55.2 bits (131), Expect = 2e-09
Identities = 35/258 (13%), Positives = 73/258 (28%), Gaps = 13/258 (5%)
Query: 57 TVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
V + HG G + ++ I + Y V A D++G G +D Y + +
Sbjct: 25 PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHII 84
Query: 116 SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
+ A + G + GG + + ++ A +
Sbjct: 85 GIMDALEIE------KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLN 138
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
+ + + D +V + I + +
Sbjct: 139 AVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWID 198
Query: 236 VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295
++ + L +HG D V +SS L E A + ++ H +
Sbjct: 199 ALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQ--LHVFGRCGHWTQIEQ 256
Query: 296 PDENANLVLKDMREWIDE 313
D + + E+ +E
Sbjct: 257 TDR----FNRLVVEFFNE 270
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 54.5 bits (129), Expect = 5e-09
Identities = 38/294 (12%), Positives = 75/294 (25%), Gaps = 38/294 (12%)
Query: 40 GKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM------FQKICISYATWGYAVFAADLLG 93
+++ + +P K + + + HG + GY+ + D G
Sbjct: 44 DQMYVRYQIPQRAK-RYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSG 102
Query: 94 HGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP 153
GRS + K+ + S + A G P
Sbjct: 103 RGRSATDI-SAINAVKLGKAPASSLPDLFA----AGHEAAWAIFRFGPRYPDAFKDTQFP 157
Query: 154 NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213
++ + +M + L+ + ++ + +
Sbjct: 158 VQAQAELWQQMVPDWLGSMP------TPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQT 211
Query: 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273
A NP+ T + C +D ++P L V G + +L
Sbjct: 212 AAMNPKGIT-----AIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACH 266
Query: 274 ASSA------------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
A G H ++Q D N V + +WI
Sbjct: 267 AFIDALNAAGGKGQLMSLPALGVHGNSHMMMQ---DRNNLQVADLILDWIGRNT 317
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 52.9 bits (125), Expect = 1e-08
Identities = 36/264 (13%), Positives = 68/264 (25%), Gaps = 20/264 (7%)
Query: 57 TVYMTHGYGSDTGWM--FQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
TV M HG G G + + + GY V D G +SD + A +
Sbjct: 32 TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ + A ++ A P+ LI P + P P
Sbjct: 92 KGLMDALDIDRAHLVGNAMGGATALNFALEY-------PDRIGKLILMGPGGLGPSMFAP 144
Query: 175 ---SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR 231
+ L +T M + +++ E L+ +R + +
Sbjct: 145 MPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLIS 204
Query: 232 EIARVCQYIQ--DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289
++ G D L A + ++ H
Sbjct: 205 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDAR--LHVFSKCGH 262
Query: 290 SLIQGEPDENANLVLKDMREWIDE 313
DE + + +++
Sbjct: 263 WAQWEHADE----FNRLVIDFLRH 282
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 51.1 bits (120), Expect = 5e-08
Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 8/259 (3%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG+ G +++ + GY V D G G+S A +
Sbjct: 25 PVVLIHGFPLS-GHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTV 83
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIPENMKP 174
+ ++ + + +
Sbjct: 84 LETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQE 143
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ A D + + + + + ++
Sbjct: 144 FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPT 203
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
+ + ++ VP L +HGT D ++ ++ KA +G H L+
Sbjct: 204 TWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP-SAEYVEVEGAPHGLLWT 262
Query: 295 EPDENANLVLKDMREWIDE 313
+E V + ++ +
Sbjct: 263 HAEE----VNTALLAFLAK 277
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 50.7 bits (119), Expect = 5e-08
Identities = 26/252 (10%), Positives = 57/252 (22%), Gaps = 6/252 (2%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR---CYLGDMEKVAAS 113
+ HG GW + K+ G+ V A DL G L D
Sbjct: 4 HFVLVHGACHG-GWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLME 62
Query: 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173
+ + +Y + FV+ + +
Sbjct: 63 LMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNE 122
Query: 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233
+ ++ + K + + + R ++
Sbjct: 123 RTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFME 182
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
+ +V + + T D + + + G H +
Sbjct: 183 DLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTE--AIEIKGADHMAML 240
Query: 294 GEPDENANLVLK 305
EP + +L+
Sbjct: 241 CEPQKLCASLLE 252
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 50.3 bits (118), Expect = 8e-08
Identities = 33/250 (13%), Positives = 69/250 (27%), Gaps = 14/250 (5%)
Query: 62 HGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
H W++ K+ G+ V A DL G +G ++ + L+F + +
Sbjct: 9 HTICHG-AWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL 67
Query: 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN------MKPS 175
E L GES GG + + + ++ L
Sbjct: 68 PPGEKV-----ILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 122
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
+ F + K+ +++ R G++ +
Sbjct: 123 VFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNIL 182
Query: 236 VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295
+ ++ + V D + P E + +G H L +
Sbjct: 183 AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDK--VYKVEGGDHKLQLTK 240
Query: 296 PDENANLVLK 305
E A ++ +
Sbjct: 241 TKEIAEILQE 250
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 50.5 bits (119), Expect = 1e-07
Identities = 50/371 (13%), Positives = 91/371 (24%), Gaps = 86/371 (23%)
Query: 13 YWGYMPEEEYYTSQGVRNGKEYFETPNGKLFTQSFLP------LDQKVKATVYMTHGYGS 66
YWGY P EEY T +G + +P + + ++ HG +
Sbjct: 22 YWGY-PAEEYE-----------VVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLA 69
Query: 67 DTG-WMFQKICISYATW----GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL------ 115
W+ S A GY V+ + G+ + Y D + A S
Sbjct: 70 SATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKY 129
Query: 116 ---SFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSA---PLFVIP 169
+ + G S G + + + F A V
Sbjct: 130 DLPATIDFILKKTGQD--KLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKY 187
Query: 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGK----- 224
+KL L L + P + + + +
Sbjct: 188 TETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFD 247
Query: 225 ----------------PRVGTMREIARVCQYIQD-------------------------- 242
P +++ + Q ++
Sbjct: 248 TMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYY 307
Query: 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANL 302
N + + VP +G D + P LL K + KI + I +
Sbjct: 308 NLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAM--DAPQA 365
Query: 303 VLKDMREWIDE 313
V ++ +
Sbjct: 366 VYNEIVSMMGT 376
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 48.2 bits (113), Expect = 5e-07
Identities = 40/327 (12%), Positives = 86/327 (26%), Gaps = 33/327 (10%)
Query: 1 MPQETQPETPPNYW------------GYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSF 47
P+ + + +W + E + V F G ++
Sbjct: 14 RPERYEEKDFDEFWEETLAESEKFPLDPVFERMESHLKTVEAYDVTFSGYRGQRIKGWLL 73
Query: 48 LPLDQKVKA-TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106
+P ++ K V GY G+ + + + GY F D G G
Sbjct: 74 VPKLEEEKLPCVVQYIGYNGGRGFPHDWL--FWPSMGYICFVMDTRGQGSGWLKGDTPDY 131
Query: 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
E F +P +F +++ + Q + S
Sbjct: 132 PEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGG 191
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ + L + + + + ++ + R
Sbjct: 192 -------IALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYAEI-----TNFLKTHR 239
Query: 227 VGTMREIARVCQYIQDNF-SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
+ + NF ++ +P L G D + P++ Y + K I+IY
Sbjct: 240 DKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYY-AGPKEIRIYP 298
Query: 286 GMYHSLIQGEPDENANLVLKDMREWID 312
H +K +++ +
Sbjct: 299 YNNHEGGGSFQAVEQ---VKFLKKLFE 322
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 47.9 bits (112), Expect = 6e-07
Identities = 37/260 (14%), Positives = 74/260 (28%), Gaps = 17/260 (6%)
Query: 57 TVYMTHGYG--SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
V + HG G +++ ++ + I Y V A D+LG G++ +
Sbjct: 24 PVILIHGGGAGAESEGNWRNV-IPILARHYRVIAMDMLGFGKTAKPDIEYTQDRR----- 77
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ + G AT L L+ ++ E +
Sbjct: 78 --IRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED 135
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ + G+ A+ ++ + R + +RE
Sbjct: 136 LRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQG 195
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
+ Y + KV VP L V G D V ++ + + I H +
Sbjct: 196 GLF-YDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSW--GYIIPHCGHWAMIE 252
Query: 295 EPDENANLVLKDMREWIDER 314
P++ ++ R
Sbjct: 253 HPED----FANATLSFLSLR 268
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 46.8 bits (109), Expect = 1e-06
Identities = 37/265 (13%), Positives = 72/265 (27%), Gaps = 18/265 (6%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HGY D G +++ GY V D G G S + A
Sbjct: 25 PVVLIHGYPLD-GHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAA----D 79
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
+ + + + A + Y L P V ++
Sbjct: 80 LHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGV 139
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGT------- 229
G+ A + D I+ + +G+
Sbjct: 140 PQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYA 199
Query: 230 -MREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288
+ + + P L +HGT D + ++ + +A + +G
Sbjct: 200 VVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP-EADYVEVEGAP 258
Query: 289 HSLIQGEPDENANLVLKDMREWIDE 313
H L+ DE V ++ ++ +
Sbjct: 259 HGLLWTHADE----VNAALKTFLAK 279
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 46.8 bits (109), Expect = 1e-06
Identities = 35/259 (13%), Positives = 72/259 (27%), Gaps = 16/259 (6%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
+ + HG+G + +++ I + + + DL G GRS G A
Sbjct: 11 NVHLVLLHGWGLN-AEVWRCI-DEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ 68
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ K + L A + L+ S P + + +
Sbjct: 69 QAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQ 128
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ LA + +A+K + + V
Sbjct: 129 QLSDDQQRTVERFLALQTMGTETARQDARALKK--------TVLALPMPEVDVLNGGLEI 180
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
++ V++PFL ++G DG+ +L + ++ I+ H+
Sbjct: 181 LKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSE--SYIFAKAAHAPFIS 238
Query: 295 EPDENANLVLKDMREWIDE 313
P E +
Sbjct: 239 HPAE----FCHLLVALKQR 253
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 46.8 bits (110), Expect = 1e-06
Identities = 31/251 (12%), Positives = 65/251 (25%), Gaps = 26/251 (10%)
Query: 79 YATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL------------SFFKHVRHSEP 126
+ T G+A +G SDG + + + +++ S K
Sbjct: 132 FLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 191
Query: 127 YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186
+ + + G+S G ++ A + + + L G
Sbjct: 192 WANGKVAMTGKSYLGTMAYGAATTGVEG-LELILAEAGISSWYNYYRENGLVRSPGGFPG 250
Query: 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ----- 241
D AA+ ++ D + + + R+ Q+
Sbjct: 251 EDLDVLAALTYSRN-----LDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYL 305
Query: 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENAN 301
N KV L VHG D P + ++ H + +
Sbjct: 306 INTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSID-- 363
Query: 302 LVLKDMREWID 312
+ + +
Sbjct: 364 -FSETINAYFV 373
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 45.7 bits (106), Expect = 3e-06
Identities = 38/273 (13%), Positives = 66/273 (24%), Gaps = 23/273 (8%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG--DMEKVAASS 114
+ + G + A G V D GRS ++AA +
Sbjct: 24 ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADA 83
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
++ + + + A S G + I M+
Sbjct: 84 VAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRG 143
Query: 175 SKLHLFMYGLLFGLADTWAAM--PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
+ G D A M P + K K ++++ +
Sbjct: 144 EPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEER 203
Query: 233 IARV-----------------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275
+VTVP L + D + K L
Sbjct: 204 AIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP 263
Query: 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308
+A + GM H+L A ++L R
Sbjct: 264 TAR--LAEIPGMGHALPSSVHGPLAEVILAHTR 294
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 45.3 bits (105), Expect = 4e-06
Identities = 46/264 (17%), Positives = 75/264 (28%), Gaps = 22/264 (8%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ +HG+ + ++ I A GY V A D GHGRS +
Sbjct: 21 PIVFSHGWPLN-ADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQL 79
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-------P 169
A LFG S GG + + + + P
Sbjct: 80 IEHLDLR-------DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANP 132
Query: 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK--VIASNPRRYTGKPRV 227
+ L + + + G + V + +
Sbjct: 133 GGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKN 192
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287
A ++ K+ VP L VHG AD V +S + ++KIY G
Sbjct: 193 AYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAAL-VKGSTLKIYSGA 251
Query: 288 YHSLIQGEPDENANLVLKDMREWI 311
H L D+ + D+ +I
Sbjct: 252 PHGLTDTHKDQ----LNADLLAFI 271
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 45.3 bits (105), Expect = 4e-06
Identities = 45/281 (16%), Positives = 82/281 (29%), Gaps = 12/281 (4%)
Query: 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLL 92
T +G +F + + P D V HG+ + + + + GY V A D
Sbjct: 2 TVTTSDGTNIFYKDWGPRDGL---PVVFHHGWPLS-ADDWDNQMLFFLSHGYRVIAHDRR 57
Query: 93 GHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE 152
GHGRSD A + + + A
Sbjct: 58 GHGRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKA 117
Query: 153 PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK 212
P+ + F L A + +P G + +
Sbjct: 118 VLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQ 177
Query: 213 VIASNPRRYTGKPRVGTMREI--ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
+ + E A D+ ++ VP L HGT D V +
Sbjct: 178 GLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPK 237
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
+ A+ ++K Y+G+ H ++ P+ + D+ ++
Sbjct: 238 SAELL-ANATLKSYEGLPHGMLSTHPEV----LNPDLLAFV 273
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.4 bits (98), Expect = 3e-05
Identities = 25/270 (9%), Positives = 56/270 (20%), Gaps = 31/270 (11%)
Query: 58 VYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG + + I+ G V DL S ++ + +
Sbjct: 5 VIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE--QVQGFREAVVP 62
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGA-ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
L S GG L+ + N + + S+P +
Sbjct: 63 IMAKAPQ-------GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL 115
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE-------------KLKVIASNPRRYT 222
K ++ + DP + +P
Sbjct: 116 KWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATV 175
Query: 223 GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK-------AS 275
+ + + + + F + + V + +
Sbjct: 176 WRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLA 235
Query: 276 SADKSIKIYDGMYHSLIQGEPDENANLVLK 305
G+ H+ +
Sbjct: 236 RGAIVRCPMAGISHTAWHSNRTLYETCIEP 265
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 42.6 bits (98), Expect = 3e-05
Identities = 32/262 (12%), Positives = 61/262 (23%), Gaps = 13/262 (4%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
V + HG G +Q + A A DL GHG + C
Sbjct: 16 TPLVVLVHGLLGS-GADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQ 74
Query: 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ M G A + + +
Sbjct: 75 TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARW 134
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ + + + V ++ ++ +IA +
Sbjct: 135 QHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSL 194
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
Y+ + +P V G D A S+ S H++
Sbjct: 195 AKQPYLLPALQALKLPIHYVCGEQDSKFQQL--------AESSGLSYSQVAQAGHNVHHE 246
Query: 295 EPDENANLVLKDMREWIDERVE 316
+P A +V + I ++
Sbjct: 247 QPQAFAKIV----QAMIHSIID 264
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 42.2 bits (97), Expect = 4e-05
Identities = 36/259 (13%), Positives = 76/259 (29%), Gaps = 12/259 (4%)
Query: 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V +HG+ D M++ ++ GY A D G GRSD + A ++
Sbjct: 21 PVLFSHGWLLD-ADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG--NDYDTFADDIA 77
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
+ + + G + + G + P+ +
Sbjct: 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG-AVTPLFGQKPDYPQGVP 136
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR---YTGKPRVGTMREI 233
L +F L D + D I + + +
Sbjct: 137 LDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVT 196
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
A + + +K+ VP L +HG D + ++ + + +K+Y H
Sbjct: 197 AFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIK-GAELKVYKDAPHGFAV 255
Query: 294 GEPDENANLVLKDMREWID 312
+ + +D+ ++
Sbjct: 256 THAQQ----LNEDLLAFLK 270
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 41.0 bits (94), Expect = 1e-04
Identities = 42/290 (14%), Positives = 77/290 (26%), Gaps = 21/290 (7%)
Query: 33 EYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLL 92
Y E ++ P D V HG + ++++ I I + + A DL+
Sbjct: 10 HYVEVLGERMHYVDVGPRD---GTPVLFLHGNPTS-SYLWRNI-IPHVAPSHRCIAPDLI 64
Query: 93 GHGRSDG----------IRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGA 142
G G+SD +R +E + + H S G A
Sbjct: 65 GMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIA 124
Query: 143 ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVG 202
+ + W ++ + + L +
Sbjct: 125 CMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMD 184
Query: 203 KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ K R P G I + + + + VP L GT +
Sbjct: 185 HYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLI 244
Query: 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
P + L E + H L + PD + ++ W+
Sbjct: 245 PPAEAARLAESLPNCK--TVDIGPGLHYLQEDNPDL----IGSEIARWLP 288
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.0 bits (90), Expect = 4e-04
Identities = 15/114 (13%), Positives = 28/114 (24%), Gaps = 17/114 (14%)
Query: 55 KATVYMTHGYGSDTGWM----FQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110
K + + HG + + I + G V+ ++ S+ E++
Sbjct: 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQL 60
Query: 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164
L G S GG T+ P+
Sbjct: 61 LQQVEEIVALSGQP------KVNLIGHSHGG-PTIRYVAAVRPDLIASATSVGA 107
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 38.6 bits (88), Expect = 4e-04
Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 8/100 (8%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA + HG + + YA G+ + A D HG +G V
Sbjct: 24 KALLLALHGLQGSKEHILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 115 LSFFKHVRHSEPYRD-------LPAFLFGESMGGAATMLM 147
+ + LP FL G S+G L+
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLL 122
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 39.1 bits (90), Expect = 5e-04
Identities = 20/115 (17%), Positives = 33/115 (28%), Gaps = 15/115 (13%)
Query: 55 KATVYMTHGYGSDTGWM-----FQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
+ V + HG + + I + G V+ A+L G DG G E+
Sbjct: 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN---GRGEQ 64
Query: 110 VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164
+ A + L G S GG + + P +
Sbjct: 65 LLAYVKQVLAATGAT------KVNLIGHSQGGLTSRYVAAV-APQLVASVTTIGT 112
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.001
Identities = 20/168 (11%), Positives = 45/168 (26%), Gaps = 6/168 (3%)
Query: 145 MLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204
+ EP + + S + + + P+ + +
Sbjct: 156 DYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM 215
Query: 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264
+ + E + + P + K+ +P L V D V P
Sbjct: 216 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVP 275
Query: 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
S+ + + + H +P E V + + +W+D
Sbjct: 276 QMSQHMEDWIPHL--KRGHIEDCGHWTQMDKPTE----VNQILIKWLD 317
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 37.0 bits (85), Expect = 0.002
Identities = 9/100 (9%), Positives = 19/100 (19%), Gaps = 12/100 (12%)
Query: 58 VYMTHGYG-SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ + G G + GY + D + ++
Sbjct: 34 ILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN--------DTQVNTEYMVN 85
Query: 117 FFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTW 156
+ + S GG P+
Sbjct: 86 AITALYAGSGNN--KLPVLTWSQGGLVAQ-WGLTFFPSIR 122
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 323 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.98 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.97 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.97 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.96 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.95 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.94 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.94 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.94 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.93 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.93 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.92 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.92 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.91 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.91 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.9 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.9 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.9 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.9 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.89 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.88 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.88 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.88 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.87 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.87 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.86 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.85 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.84 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.84 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.83 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.83 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.83 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.81 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.8 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.8 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.79 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.78 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.78 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.77 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.75 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.71 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.7 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.64 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.6 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.58 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.57 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.49 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.49 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.39 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.35 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.33 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.3 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.22 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.15 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.13 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.02 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.87 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.79 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.75 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.43 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.28 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.26 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.22 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.14 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.12 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.1 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.07 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.78 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.68 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 97.41 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 97.27 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 97.16 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 97.11 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 97.09 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 97.03 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 96.86 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 96.44 | |
| d1b74a1 | 105 | Glutamate racemase {Aquifex pyrophilus [TaxId: 271 | 81.02 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=1.9e-36 Score=237.75 Aligned_cols=258 Identities=14% Similarity=0.084 Sum_probs=168.2
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhh-HHHHHHHhcCCcEEEEeccccCcCCCCCC--CCCCChHHH
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-QKICISYATWGYAVFAADLLGHGRSDGIR--CYLGDMEKV 110 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~--~~~~~~~~~ 110 (323)
+...+| +|+|..+|+++ +|+|||+||++++.. .| ..+++.|.++||+|+++|+||||.|+... ...++++++
T Consensus 4 ~~~~g~~~i~y~~~G~~~---~p~vvl~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 79 (297)
T d1q0ra_ 4 IVPSGDVELWSDDFGDPA---DPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL 79 (297)
T ss_dssp EEEETTEEEEEEEESCTT---SCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHH
T ss_pred EEEECCEEEEEEEecCCC---CCEEEEECCCCcChh-HHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchh
Confidence 445677 99999999765 789999999998876 55 56788898889999999999999997543 233589999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccc
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
++|+..+++.+..+ +++++||||||.+++.+|..+|++ |+++|++++..........................
T Consensus 80 ~~d~~~ll~~l~~~------~~~lvGhS~Gg~~a~~~a~~~P~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (297)
T d1q0ra_ 80 AADAVAVLDGWGVD------RAHVVGLSMGATITQVIALDHHDR-LSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 152 (297)
T ss_dssp HHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCC
T ss_pred hhhhcccccccccc------ceeeccccccchhhhhhhcccccc-eeeeEEEccccccccchhhhHHHhhhhhhhhhhhh
Confidence 99999999999754 899999999999999999999999 99999998765432211100000000000000000
Q ss_pred ccccCC-CcccccccccC--hhhH------HHhhcCCcccCCCCCchhHHHHHH---------------------hhHHH
Q 020630 191 TWAAMP-DNKMVGKAIKD--PEKL------KVIASNPRRYTGKPRVGTMREIAR---------------------VCQYI 240 (323)
Q Consensus 191 ~~~~~~-~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~ 240 (323)
...... ........... .... ......... ........... ...+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (297)
T d1q0ra_ 153 PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVP----FDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSR 228 (297)
T ss_dssp CCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSC----CCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGG
T ss_pred hhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcccccc----chHHHHHHHHHHhhhhccccchhhhhhhhhhhccccc
Confidence 000000 00000000000 0000 000000000 00000000000 00112
Q ss_pred HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
...++++++|+++|+|++|.++|++.++.+.+.+ +++++++++++||+++ .+.++++.+.|.+||+.
T Consensus 229 ~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~----~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 229 AAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGHALP----SSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS--TTEEEEEETTCCSSCC----GGGHHHHHHHHHHHHHH
T ss_pred hhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCcch----hhCHHHHHHHHHHHHHh
Confidence 3456788999999999999999999999999988 8899999999999998 45557788888888875
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.8e-37 Score=240.43 Aligned_cols=263 Identities=12% Similarity=0.089 Sum_probs=171.3
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc--hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
+...+.+.+| +++|+.+|. +|+|||+||++++.. ..|..+++.|++ ||+|+++|+||||.|..+.....+.
T Consensus 3 ~~~~~i~~~G~~~~Y~~~G~-----G~pvvllHG~~~~~~~~~~~~~~~~~l~~-~~~vi~~Dl~G~G~S~~~~~~~~~~ 76 (271)
T d1uk8a_ 3 EIGKSILAAGVLTNYHDVGE-----GQPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVGFGFTDRPENYNYSK 76 (271)
T ss_dssp TCCEEEEETTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCTTCCCCH
T ss_pred CCCCEEEECCEEEEEEEEee-----CCeEEEECCCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCCCCCccccccccccc
Confidence 4456678899 999999874 468999999987643 135567777864 8999999999999998776666688
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+++++++..+++.+..+ +++++||||||.+++.+|.++|++ ++++|++++.......................
T Consensus 77 ~~~~~~~~~~~~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1uk8a_ 77 DSWVDHIIGIMDALEIE------KAHIVGNAFGGGLAIATALRYSER-VDRMVLMGAAGTRFDVTEGLNAVWGYTPSIEN 149 (271)
T ss_dssp HHHHHHHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCSCCCCCHHHHHHHTCCSCHHH
T ss_pred cccchhhhhhhhhhcCC------CceEeeccccceeehHHHHhhhcc-chheeecccCCCcccchhhhhhhhhccchhHH
Confidence 99999999999998754 899999999999999999999999 99999998865443332211111000000000
Q ss_pred ccccccc-CCCcccccccccChhhHHHhhcCC-cccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 188 LADTWAA-MPDNKMVGKAIKDPEKLKVIASNP-RRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 188 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
....... ........................ ..+.. ...................+.++++|+++|+|++|.++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 228 (271)
T d1uk8a_ 150 MRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSS-MFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLS 228 (271)
T ss_dssp HHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHT-TSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHH
T ss_pred HHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHh-hcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHH
Confidence 0000000 000000000000000000000000 00000 00000111111111123456788999999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.++.+.+.+ +++++++++++||++++++| +++.+.|.+||++
T Consensus 229 ~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 229 SSLRLGELI--DRAQLHVFGRCGHWTQIEQT----DRFNRLVVEFFNE 270 (271)
T ss_dssp HHHHHHHHC--TTEEEEEESSCCSCHHHHTH----HHHHHHHHHHHHT
T ss_pred HHHHHHHhC--CCCEEEEECCCCCchHHHCH----HHHHHHHHHHHhc
Confidence 999999998 78999999999999996554 6799999999975
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.1e-36 Score=236.39 Aligned_cols=254 Identities=16% Similarity=0.200 Sum_probs=166.3
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.|| +|+|..+|. +|+|||+||+++++. .|..+++.|.++||+|+++|+||||.|+.+... .+..++++
T Consensus 2 ~~~t~dG~~l~y~~~G~-----g~~ivlvHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 74 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWGQ-----GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDG-YDFDTFAD 74 (274)
T ss_dssp EEECTTSCEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHHH
T ss_pred eEECcCCCEEEEEEECC-----CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccc-ccchhhHH
Confidence 5789999 999999973 468999999998877 899999999888999999999999999876543 48999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCCc------hhHHHHHHhhc-
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMK------PSKLHLFMYGL- 184 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~- 184 (323)
|+.++++.+..+ +++++||||||.+++.+++++ |++ |++++++++......... .......+...
T Consensus 75 dl~~~l~~l~~~------~~~lvGhS~Gg~~~~~~~a~~~p~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (274)
T d1a8qa_ 75 DLNDLLTDLDLR------DVTLVAHSMGGGELARYVGRHGTGR-LRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGV 147 (274)
T ss_dssp HHHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhh------hhcccccccccchHHHHHHHhhhcc-ceeEEEEeccCccchhhhhccchhhHHHHHHHHhhh
Confidence 999999998754 899999999999998876664 777 999999987543322111 00000000000
Q ss_pred -------ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEe
Q 020630 185 -------LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 185 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~ 255 (323)
.......+. ..................... ................ +..+.+.++++|+++|+
T Consensus 148 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 219 (274)
T d1a8qa_ 148 LTERSQFWKDTAEGFF---SANRPGNKVTQGNKDAFWYMA-----MAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVH 219 (274)
T ss_dssp HHHHHHHHHHHHHHHT---TTTSTTCCCCHHHHHHHHHHH-----TTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred hhhhHHHhhhhhhhhh---hccccchhhhhhHHHHHHHhh-----hccchhhhhhHHHHhhccchHHHHHhccceeeeec
Confidence 000000000 000000000000000000000 0001111111111111 12345678999999999
Q ss_pred eCCCcccCchhH-HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 256 GTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 256 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
|++|.+++.+.. +.+.+.+ +++++++++++||+.+++. +.++++.+.|.+||++
T Consensus 220 G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~~~--~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 220 GDDDQVVPIDATGRKSAQII--PNAELKVYEGSSHGIAMVP--GDKEKFNRDLLEFLNK 274 (274)
T ss_dssp ETTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTTTTST--THHHHHHHHHHHHHTC
T ss_pred cCCCCCcCHHHHHHHHHHhC--CCCEEEEECCCCCcccccc--cCHHHHHHHHHHHHCc
Confidence 999999998764 5566666 7899999999999988643 3467899999999863
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-36 Score=238.71 Aligned_cols=262 Identities=15% Similarity=0.099 Sum_probs=174.3
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCC-CCCChH
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRC-YLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~ 108 (323)
...++.+.|| +|+|..+|. +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|..+.. ..++.+
T Consensus 12 ~~~~v~~~~g~~i~y~~~G~-----gp~vlllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 85 (322)
T d1zd3a2 12 SHGYVTVKPRVRLHFVELGS-----GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCME 85 (322)
T ss_dssp EEEEEEEETTEEEEEEEECC-----SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHH
T ss_pred ceeEEEECCCCEEEEEEEcC-----CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEecccccccccccccccccccc
Confidence 4556788899 999999873 579999999998877 89999999999999999999999999986543 335789
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH---------
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--------- 179 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~--------- 179 (323)
++++++.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++...............
T Consensus 86 ~~~~~i~~l~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 86 VLCKEMVTFLDKLGLS------QAVFIGHDWGGMLVWYMALFYPER-VRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp HHHHHHHHHHHHHTCS------CEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred ccchhhhhhhhccccc------ccccccccchHHHHHHHHHhCCcc-ccceEEEcccccccccccchhhhhhccchhhhH
Confidence 9999999999998754 899999999999999999999999 999999986544322221110000
Q ss_pred -----------HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcc-----cCCCCCchhHHHH----------
Q 020630 180 -----------FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR-----YTGKPRVGTMREI---------- 233 (323)
Q Consensus 180 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---------- 233 (323)
.................... ................. .............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASDES----VLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFR 234 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTTSC----CCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccchh----hhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccc
Confidence 00000000000000000000 00000000000000000 0000000000000
Q ss_pred ---------H-HhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHH
Q 020630 234 ---------A-RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLV 303 (323)
Q Consensus 234 ---------~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 303 (323)
. ...........++++|+++++|++|.+++++..+.+.+.+ +++++++++++||++++++| +++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~v 308 (322)
T d1zd3a2 235 GPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDKP----TEV 308 (322)
T ss_dssp HHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC--TTCEEEEETTCCSCHHHHSH----HHH
T ss_pred cccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCchHHhCH----HHH
Confidence 0 0011233456788999999999999999999988888877 78999999999999996555 679
Q ss_pred HHHHHHHHHHHH
Q 020630 304 LKDMREWIDERV 315 (323)
Q Consensus 304 ~~~i~~fl~~~~ 315 (323)
.+.|.+||+++.
T Consensus 309 ~~~i~~FL~~~~ 320 (322)
T d1zd3a2 309 NQILIKWLDSDA 320 (322)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhcC
Confidence 999999999864
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=2.1e-36 Score=234.81 Aligned_cols=256 Identities=19% Similarity=0.243 Sum_probs=166.2
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.|| +|+|..+++++ +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .++++++++
T Consensus 2 ~i~~~dG~~l~y~~~G~~~---~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~ 76 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRD---GLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-GHDMDTYAA 76 (275)
T ss_dssp EEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred EEEecCCCEEEEEEecCCC---CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccc-ccccccccc
Confidence 6889999 99999999865 678999999998877 89999999988999999999999999986544 358999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEech-hHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch------hHHHHHHhhcc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESM-GGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP------SKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~-Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~------~~~~~~~~~~~ 185 (323)
|+.++++.+..+ +++++|||+ ||.+++.+|.++|++ |+++|++++.......... ..........+
T Consensus 77 ~~~~~l~~l~~~------~~~~vg~s~~G~~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
T d1a88a_ 77 DVAALTEALDLR------GAVHIGHSTGGGEVARYVARAEPGR-VAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAAL 149 (275)
T ss_dssp HHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHSCTTS-EEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred cccccccccccc------ccccccccccccchhhcccccCcch-hhhhhhhcccccccccchhhhhhhhhhhhhhhhhhh
Confidence 999999998754 789999987 666777788899999 9999999875432211110 00010000000
Q ss_pred c----ccccccccCCCcccc-cccccChhhH-HHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeC
Q 020630 186 F----GLADTWAAMPDNKMV-GKAIKDPEKL-KVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 257 (323)
. ............... .......... ....... ............... +..+.+.++++|+++++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~ 224 (275)
T d1a88a_ 150 AANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM-----MGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGT 224 (275)
T ss_dssp HHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEET
T ss_pred hhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhc-----ccchHHHHHHHHHhhhhhhhHHHHhhccccceeecC
Confidence 0 000000000000000 0000000000 0000000 000001111111110 1123456789999999999
Q ss_pred CCcccCchhH-HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|.+.. +.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 225 ~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 225 DDQVVPYADAAPKSAELL--ANATLKSYEGLPHGMLSTHP----EVLNPDLLAFVK 274 (275)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHCH----HHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHhC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHc
Confidence 9999988654 5555666 78999999999999996555 679999999986
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.5e-36 Score=237.67 Aligned_cols=267 Identities=16% Similarity=0.160 Sum_probs=174.9
Q ss_pred CCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
+.+.+..++. .+| +|+|..+++++ +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+.+.. .+
T Consensus 4 ~~p~~~~~i~-~~g~~i~y~~~G~~~---~p~lvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~-~~ 76 (291)
T d1bn7a_ 4 GFPFDPHYVE-VLGERMHYVDVGPRD---GTPVLFLHGNPTSSY-LWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDL-DY 76 (291)
T ss_dssp CCCCCCEEEE-ETTEEEEEEEESCSS---SSCEEEECCTTCCGG-GGTTTHHHHTT-TSCEEEECCTTSTTSCCCSC-CC
T ss_pred CCCCCCeEEE-ECCEEEEEEEeCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEEeCCCCcccccccc-cc
Confidence 3445555554 578 99999999765 789999999998876 88899999965 79999999999999986543 45
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+++++|+.++++.+..+ +++++||||||.+++.++.++|++ +++++++++.....................
T Consensus 77 ~~~~~~~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-~~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
T d1bn7a_ 77 FFDDHVRYLDAFIEALGLE------EVVLVIHDWGSALGFHWAKRNPER-VKGIACMEFIRPIPTWDEWPEFARETFQAF 149 (291)
T ss_dssp CHHHHHHHHHHHHHHTTCC------SEEEEEEHHHHHHHHHHHHHCGGG-EEEEEEEEECCCBCSGGGSCHHHHHHHHHH
T ss_pred chhHHHHHHhhhhhhhccc------cccccccccccchhHHHHHhCCcc-eeeeeeeccccCCccchhhhhhhhhHHHHH
Confidence 8999999999999998754 899999999999999999999999 999999876554332221111111111000
Q ss_pred cc--cccccccCCCc---cccccc----ccChhhHHHhhcCCcccC---------CCCCchhHHHHHHhhHHHHhcCCcc
Q 020630 186 FG--LADTWAAMPDN---KMVGKA----IKDPEKLKVIASNPRRYT---------GKPRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 186 ~~--~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
.. ........... ...... .................. .....................+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (291)
T d1bn7a_ 150 RTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQS 229 (291)
T ss_dssp TSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred hhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcC
Confidence 00 00000000000 000000 000000000000000000 0000001111111222233445778
Q ss_pred cccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|+++++|++|.++|++.++.+.+.+ +++++++++++||+++.++| +++.+.|.+||+.
T Consensus 230 ~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~v~~~i~~fL~~ 289 (291)
T d1bn7a_ 230 PVPKLLFWGTPGVLIPPAEAARLAESL--PNCKTVDIGPGLHYLQEDNP----DLIGSEIARWLPG 289 (291)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCGGGTCH----HHHHHHHHHHSGG
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHHh
Confidence 999999999999999999999999998 78999999999999996665 6688999999864
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=3e-36 Score=235.53 Aligned_cols=256 Identities=18% Similarity=0.173 Sum_probs=163.8
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+...|| +|+|..++.++ .+|+||++||+++++. .|......+.++||+|+++|+||||.|+.+....++++.+++|
T Consensus 6 ~~~~~g~~i~y~~~g~~~--~~~~iv~lHG~~g~~~-~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 82 (290)
T d1mtza_ 6 YAKVNGIYIYYKLCKAPE--EKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEE 82 (290)
T ss_dssp EEEETTEEEEEEEECCSS--CSEEEEEECCTTTCCS-GGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHH
T ss_pred eEEECCEEEEEEEcCCCC--CCCeEEEECCCCCchH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhhh
Confidence 445689 99999999753 3789999999977766 4555555677779999999999999998766556689999999
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc-cccccccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL-LFGLADTW 192 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 192 (323)
+.++++++.. ..+++++||||||.+|+.+|.++|++ |+++|++++......... ........ ........
T Consensus 83 l~~ll~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 153 (290)
T d1mtza_ 83 AEALRSKLFG-----NEKVFLMGSSYGGALALAYAVKYQDH-LKGLIVSGGLSSVPLTVK---EMNRLIDELPAKYRDAI 153 (290)
T ss_dssp HHHHHHHHHT-----TCCEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBHHHHHH---HHHHHHHTSCHHHHHHH
T ss_pred hhhhhccccc-----ccccceecccccchhhhhhhhcChhh-heeeeecccccCcccchh---hhhhhhhhhhHHHHHHH
Confidence 9999998853 23899999999999999999999999 999999987653211000 00000000 00000000
Q ss_pred ccCCCcccccccccChhhH----HHhhcCCcccCCCCCchhHHHHHH----------------------hhHHHHhcCCc
Q 020630 193 AAMPDNKMVGKAIKDPEKL----KVIASNPRRYTGKPRVGTMREIAR----------------------VCQYIQDNFSK 246 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 246 (323)
.. ............. ............ ........... ...+....+++
T Consensus 154 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (290)
T d1mtza_ 154 KK----YGSSGSYENPEYQEAVNYFYHQHLLRSED-WPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISA 228 (290)
T ss_dssp HH----HHHHTCTTCHHHHHHHHHHHHHHTSCSSC-CCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGG
T ss_pred HH----hhhhccccchhHHHHHHHHhhhhhccccc-chHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhc
Confidence 00 0000000000000 000000000000 00000000000 00001234567
Q ss_pred ccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++|+++++|++|.++| +.++.+.+.+ +++++++++++||++++++| +++.+.|.+||.++
T Consensus 229 i~~P~l~i~G~~D~~~~-~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 229 IKIPTLITVGEYDEVTP-NVARVIHEKI--AGSELHVFRDCSHLTMWEDR----EGYNKLLSDFILKH 289 (290)
T ss_dssp CCSCEEEEEETTCSSCH-HHHHHHHHHS--TTCEEEEETTCCSCHHHHSH----HHHHHHHHHHHHTC
T ss_pred ccceEEEEEeCCCCCCH-HHHHHHHHHC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHHHh
Confidence 89999999999998765 6678888888 78999999999999996554 67999999999875
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-36 Score=224.49 Aligned_cols=199 Identities=18% Similarity=0.234 Sum_probs=155.6
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHH--HHHHHhcCCcEEEEeccccCcCCCCCCC-CC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK--ICISYATWGYAVFAADLLGHGRSDGIRC-YL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~ 104 (323)
+.++.++. .+| +++|+.++|..+..+++|||+||++++.. .|.. .++.|+++||+|+++|+||||.|+.... ..
T Consensus 5 ~~~e~~i~-v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~-~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~ 82 (208)
T d1imja_ 5 EQREGTIQ-VQGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAP 82 (208)
T ss_dssp EECCCCEE-ETTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSC
T ss_pred CceEEEEE-ECCEEEEEEEecCCCCCCCCeEEEECCCCCChh-HHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccc
Confidence 33444554 588 99999999876577899999999998866 6765 4688999999999999999999986542 22
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++....++++.++++.+... +++|+||||||.+++.+|.++|++ ++++|+++|.....
T Consensus 83 ~~~~~~~~~l~~~~~~l~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lV~~~p~~~~~--------------- 140 (208)
T d1imja_ 83 IGELAPGSFLAAVVDALELG------PPVVISPSLSGMYSLPFLTAPGSQ-LPGFVPVAPICTDK--------------- 140 (208)
T ss_dssp TTSCCCTHHHHHHHHHHTCC------SCEEEEEGGGHHHHHHHHTSTTCC-CSEEEEESCSCGGG---------------
T ss_pred cchhhhhhhhhhcccccccc------cccccccCcHHHHHHHHHHHhhhh-cceeeecCcccccc---------------
Confidence 34445567788888888754 899999999999999999999999 99999998743100
Q ss_pred ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
+ ....+.++++|+|+|+|++|.++|.
T Consensus 141 -------~-----------------------------------------------~~~~~~~i~~P~Lii~G~~D~~~~~ 166 (208)
T d1imja_ 141 -------I-----------------------------------------------NAANYASVKTPALIVYGDQDPMGQT 166 (208)
T ss_dssp -------S-----------------------------------------------CHHHHHTCCSCEEEEEETTCHHHHH
T ss_pred -------c-----------------------------------------------ccccccccccccccccCCcCcCCcH
Confidence 0 0122456789999999999998875
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+. ...+.+ +++++.+++++||..++++| +++.+.+.+||++
T Consensus 167 ~~--~~~~~~--~~~~~~~i~~~gH~~~~~~p----~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 167 SF--EHLKQL--PNHRVLIMKGAGHPCYLDKP----EEWHTGLLDFLQG 207 (208)
T ss_dssp HH--HHHTTS--SSEEEEEETTCCTTHHHHCH----HHHHHHHHHHHHT
T ss_pred HH--HHHHhC--CCCeEEEECCCCCchhhhCH----HHHHHHHHHHHhc
Confidence 42 334455 78999999999999986555 6688999999874
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=5.2e-36 Score=236.71 Aligned_cols=257 Identities=12% Similarity=0.086 Sum_probs=169.3
Q ss_pred cCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCChHHHHhhH
Q 020630 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGDMEKVAASS 114 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~d~ 114 (323)
..|| +++|..+|+.+ ..|+|||+||++++.. .|..+...|+++||+|+++|+||||.|..+. ...++++.+++|+
T Consensus 30 ~~~g~~~~y~~~G~~~--~~p~llllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l 106 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNSD--AEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFL 106 (310)
T ss_dssp TCTTCEEEEEEEECTT--CSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHH
T ss_pred CCCCEEEEEEEecCCC--CCCEEEEECCCCCchH-HHHHHHHHhhccCceEEEeeecCccccccccccccccccccccch
Confidence 5688 99999999764 3789999999998876 8888999999999999999999999998643 3446899999999
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc---cc
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA---DT 191 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 191 (323)
.++++.+..+ +++|+||||||.+++.+|.++|++ |+++|++++............ ............ ..
T Consensus 107 ~~~l~~l~~~------~~~lvGhS~Gg~ia~~~A~~~P~~-V~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 178 (310)
T d1b6ga_ 107 LALIERLDLR------NITLVVQDWGGFLGLTLPMADPSR-FKRLIIMNACLMTDPVTQPAF-SAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHTCC------SEEEEECTHHHHHHTTSGGGSGGG-EEEEEEESCCCCCCTTTCTHH-HHTTTSSTTTHHHHHHH
T ss_pred hhhhhhcccc------ccccccceecccccccchhhhccc-cceEEEEcCccCCCcccchhH-HHHhhcchhhhhhhhhh
Confidence 9999998865 899999999999999999999999 999999988654332221111 000000000000 00
Q ss_pred cc---cCCCccccccccc--ChhhHHHhhcCCcccCCCCCchhHHHH---H---------HhhHHHHhcCCcccccEEEE
Q 020630 192 WA---AMPDNKMVGKAIK--DPEKLKVIASNPRRYTGKPRVGTMREI---A---------RVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 192 ~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~P~l~i 254 (323)
.. ............. .......... .+...........+ . ............+++|++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (310)
T d1b6ga_ 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAA---PFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMA 255 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHT---TCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred hccchhhhhhhhhhccCccccHHHHHHHHh---hcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEE
Confidence 00 0000000000000 0000000100 00000000000000 0 00111222345678999999
Q ss_pred eeCCCcccCchhHHHHHHHhcCCC-CcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 255 HGTADGVTCPTSSKLLYEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|++|.+++++....+.+.+ ++ .++++++++||+++ ++.++.+.+.|.+||++
T Consensus 256 ~G~~D~~~~~~~~~~~~~~~--~~~~~~~~i~~~GH~~~----~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 256 IGMKDKLLGPDVMYPMKALI--NGCPEPLEIADAGHFVQ----EFGEQVAREALKHFAET 309 (310)
T ss_dssp EETTCSSSSHHHHHHHHHHS--TTCCCCEEETTCCSCGG----GGHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCHHHHHHHHHhc--CCCccEEEECCCcCchh----hhCHHHHHHHHHHHHhC
Confidence 99999999999999988888 44 47888999999988 55668899999999874
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=1.2e-36 Score=235.38 Aligned_cols=247 Identities=17% Similarity=0.116 Sum_probs=163.4
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcc--hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
.+.+.|| +|+|..+|. +|+|||+||++++.. ..|..+.+.|++ ||+|+++|+||||.|+.+... .+.+++
T Consensus 5 ~~~~~dg~~l~y~~~G~-----g~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~ 77 (268)
T d1j1ia_ 5 RFVNAGGVETRYLEAGK-----GQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDIE-YTQDRR 77 (268)
T ss_dssp EEEEETTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSSC-CCHHHH
T ss_pred eEEEECCEEEEEEEEcC-----CCeEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccccccccCCccc-cccccc
Confidence 3445689 999998874 467999999987643 256778888865 799999999999999865443 489999
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH-------HHhh
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL-------FMYG 183 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~-------~~~~ 183 (323)
++++.++++.+..+ .+++++||||||.+++.+|.++|++ |+++|++++............... ....
T Consensus 78 ~~~~~~~i~~l~~~-----~~~~liG~S~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (268)
T d1j1ia_ 78 IRHLHDFIKAMNFD-----GKVSIVGNSMGGATGLGVSVLHSEL-VNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVH 151 (268)
T ss_dssp HHHHHHHHHHSCCS-----SCEEEEEEHHHHHHHHHHHHHCGGG-EEEEEEESCCBCCCC----------CCSCHHHHHH
T ss_pred cccchhhHHHhhhc-----ccceeeeccccccccchhhccChHh-hheeeecCCCccccccchhhhhhhhhhhhhhhhHH
Confidence 99999999988653 3799999999999999999999999 999999998654332211100000 0000
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHH------HHhcCCcccccEEEEeeC
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY------IQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~l~i~g~ 257 (323)
........... . ............... ............... ..+.+.++++|+++|+|+
T Consensus 152 ~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~ 217 (268)
T d1j1ia_ 152 LVKALTNDGFK-I---------DDAMINSRYTYATDE----ATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGK 217 (268)
T ss_dssp HHHHHSCTTCC-C---------CHHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEET
T ss_pred HHHHHhhhhhh-h---------hhhhhHHHHHhhhhh----hhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeC
Confidence 00000000000 0 000000000000000 000000000000000 123457889999999999
Q ss_pred CCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|.++|++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||.+
T Consensus 218 ~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 218 DDKVVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHP----EDFANATLSFLSL 267 (268)
T ss_dssp TCSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSH----HHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHcC
Confidence 99999999999999998 78999999999999996554 6799999999976
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=9e-35 Score=226.31 Aligned_cols=251 Identities=15% Similarity=0.164 Sum_probs=160.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc--hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC----ChHHHHhhH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG----DMEKVAASS 114 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~----~~~~~~~d~ 114 (323)
+++|...|+++ +|+|||+||++++.. ..|..+++.|++ ||+|+++|+||||.|+....... +.++.++++
T Consensus 15 ~~h~~~~G~~~---~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i 90 (281)
T d1c4xa_ 15 ASHALVAGDPQ---SPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQI 90 (281)
T ss_dssp CEEEEEESCTT---SCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHH
T ss_pred EEEEEEEecCC---CCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccchhhHHHhhhhc
Confidence 99999999865 899999999987543 257778888876 79999999999999987654322 355677888
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc-cccccc
Q 020630 115 LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG-LADTWA 193 (323)
Q Consensus 115 ~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 193 (323)
.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++............ ..+...... ......
T Consensus 91 ~~~i~~~~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 161 (281)
T d1c4xa_ 91 LGLMNHFGIE------KSHIVGNSMGGAVTLQLVVEAPER-FDKVALMGSVGAPMNARPPEL--ARLLAFYADPRLTPYR 161 (281)
T ss_dssp HHHHHHHTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCSSCCHHH--HHHHTGGGSCCHHHHH
T ss_pred cccccccccc------cceecccccccccccccccccccc-ccceEEeccccCccccchhHH--HHHHHhhhhcccchhh
Confidence 8888887644 899999999999999999999999 999999998654333322221 111111100 000000
Q ss_pred cCCCcccccccccChhhHHHhhcCCcccCCCCCchhH-HHHHHh-------hHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTM-REIARV-------CQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
............. .............. ........ ...... .......+.++++|+|+++|++|.++|++
T Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 239 (281)
T d1c4xa_ 162 ELIHSFVYDPENF-PGMEEIVKSRFEVA-NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLD 239 (281)
T ss_dssp HHHHTTSSCSTTC-TTHHHHHHHHHHHH-HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTH
T ss_pred hhhhhhccccccc-chhhhHHHHHhhhc-ccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHH
Confidence 0000000000000 00000000000000 00000000 000000 00011335778999999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.++.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 240 ~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 240 TSLYLTKHL--KHAELVVLDRCGHWAQLERW----DAMGPMLMEHFR 280 (281)
T ss_dssp HHHHHHHHC--SSEEEEEESSCCSCHHHHSH----HHHHHHHHHHHH
T ss_pred HHHHHHHHC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHhC
Confidence 999999988 78999999999999996555 679999999986
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.4e-34 Score=224.69 Aligned_cols=246 Identities=16% Similarity=0.189 Sum_probs=157.1
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+|+|..+|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+..... ++++++++|+.++++.
T Consensus 14 ~i~y~~~G~-----G~~ivllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~dl~~~l~~ 86 (277)
T d1brta_ 14 DLYYEDHGT-----GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTG-YDYDTFAADLNTVLET 86 (277)
T ss_dssp EEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHHHHHHHHHHH
T ss_pred EEEEEEEcc-----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCCCCcccccccc-cchhhhhhhhhhhhhc
Confidence 788888873 568999999998877 899999999989999999999999999865443 5899999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhH-HHHHHHHhhcCCCCeeEEEEccCccCCCCCCc-------hhHHHHHHhhcccc----c
Q 020630 121 VRHSEPYRDLPAFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-------PSKLHLFMYGLLFG----L 188 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~-------~~~~~~~~~~~~~~----~ 188 (323)
++.+ +++++|||||| .++..++..+|++ |+++|++++......... .............. .
T Consensus 87 l~~~------~~~lvGhS~G~~~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
T d1brta_ 87 LDLQ------DAVLVGFSTGTGEVARYVSSYGTAR-IAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159 (277)
T ss_dssp HTCC------SEEEEEEGGGHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHH
T ss_pred cCcc------cccccccccchhhhhHHHHHhhhcc-cceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhh
Confidence 9754 89999999996 5566677778998 999999987543221111 00011111000000 0
Q ss_pred cccc-ccC-CCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh---hHHHHhcCCcccccEEEEeeCCCcccC
Q 020630 189 ADTW-AAM-PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV---CQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 189 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
.... ... ....................... . .......... ..+....+.++++|+++++|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~ 232 (277)
T d1brta_ 160 YTGFFNDFYNLDENLGTRISEEAVRNSWNTAA----S---GGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP 232 (277)
T ss_dssp HHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHH----H---SCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSC
T ss_pred hhhccccccccchhhhhhhhHHHhhhhhcccc----h---hhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcC
Confidence 0000 000 00000000000000000000000 0 0000000000 001234567789999999999999999
Q ss_pred chhH-HHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 264 PTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.. +.+.+.+ +++++++++++||++++++ ++++.+.|.+||++
T Consensus 233 ~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~fL~k 277 (277)
T d1brta_ 233 IENTARVFHKAL--PSAEYVEVEGAPHGLLWTH----AEEVNTALLAFLAK 277 (277)
T ss_dssp GGGTHHHHHHHC--TTSEEEEETTCCTTHHHHT----HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC--CCCEEEEECCCCCchHHhC----HHHHHHHHHHHHCc
Confidence 8764 5566666 7899999999999999554 47799999999974
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=9.2e-35 Score=225.20 Aligned_cols=256 Identities=20% Similarity=0.237 Sum_probs=163.0
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
+|++.|| +|+|..+|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... ++.+++++
T Consensus 2 ~f~~~dG~~i~y~~~G~-----g~pvvllHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 74 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWGS-----GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSG-NDMDTYAD 74 (273)
T ss_dssp EEECTTSCEEEEEEESC-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSC-CSHHHHHH
T ss_pred EEEeeCCcEEEEEEECC-----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEechhcCcccccccc-ccccchHH
Confidence 6788999 999999874 567999999999877 899999999888999999999999999876543 58999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHH-HhhcCCCCeeEEEEccCccCCCCCCc------hhHHHHHHhhc-
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLM-YFQSEPNTWTGLIFSAPLFVIPENMK------PSKLHLFMYGL- 184 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~-a~~~p~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~- 184 (323)
|+.++++.+... +.+++|||+||.++..+ +..+|++ |.+++++++......... ...........
T Consensus 75 ~~~~~l~~l~~~------~~~lvg~s~gG~~~~~~~a~~~p~~-v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T d1a8sa_ 75 DLAQLIEHLDLR------DAVLFGFSTGGGEVARYIGRHGTAR-VAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQAS 147 (273)
T ss_dssp HHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHhcCcc------ceeeeeeccCCccchhhhhhhhhhc-cceeEEEecccccccccccccccchhhhhhhHHHHH
Confidence 999999998754 78999999988655554 5556888 999999987553221111 00000000000
Q ss_pred ---ccccccccccCCCcccc-cccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCC
Q 020630 185 ---LFGLADTWAAMPDNKMV-GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~ 258 (323)
................. .................. ............... +....++++++|+++++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~ 223 (273)
T d1a8sa_ 148 LADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM----AAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDA 223 (273)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH----HSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETT
T ss_pred HHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhc----ccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCC
Confidence 00000000000000000 000000000000000000 000001111111110 12244577899999999999
Q ss_pred CcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|.+....+.+.+. +++++++++++||++++++| +++++.|.+||+
T Consensus 224 D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 224 DQVVPIEASGIASAALV-KGSTLKIYSGAPHGLTDTHK----DQLNADLLAFIK 272 (273)
T ss_dssp CSSSCSTTTHHHHHHHS-TTCEEEEETTCCSCHHHHTH----HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCH----HHHHHHHHHHcC
Confidence 99999988777765542 67899999999999996555 679999999986
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=8.5e-35 Score=226.13 Aligned_cols=252 Identities=15% Similarity=0.142 Sum_probs=158.0
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+|+|..+|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... ++++++++|+.++++.
T Consensus 14 ~i~y~~~G~-----g~~illlHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~di~~~i~~ 86 (279)
T d1hkha_ 14 ELYYEDQGS-----GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTG-YDYDTFAADLHTVLET 86 (279)
T ss_dssp EEEEEEESS-----SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSC-CSHHHHHHHHHHHHHH
T ss_pred EEEEEEEcc-----CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEechhhCCccccccc-cchhhhhhhhhhhhhh
Confidence 788988873 578999999998877 899999888888999999999999999865543 5899999999999999
Q ss_pred HHhhCCCCCCCEEEEEechhH-HHHHHHHhhcCCCCeeEEEEccCccCCCCCCch------hHHHHHHhhcccccccc--
Q 020630 121 VRHSEPYRDLPAFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP------SKLHLFMYGLLFGLADT-- 191 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-- 191 (323)
+..+ +++|+|||||| .++..+|..+|++ |.+++++++.......... ......+..........
T Consensus 87 l~~~------~~~lvGhS~Gg~~~a~~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T d1hkha_ 87 LDLR------DVVLVGFSMGTGELARYVARYGHER-VAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred cCcC------ccccccccccccchhhhhccccccc-cceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhh
Confidence 8754 89999999996 5666677778998 9999999875432211110 00000000000000000
Q ss_pred ---cccC-CCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch-h
Q 020630 192 ---WAAM-PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT-S 266 (323)
Q Consensus 192 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~ 266 (323)
.... ......................... ....................+.++.+++|+++++|++|.+++.+ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 238 (279)
T d1hkha_ 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGS-APVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDAT 238 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTS-CTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTT
T ss_pred hhhhhhhcccchhhhhhhhhhhhhhhhhhhccc-chhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHH
Confidence 0000 0000000000000000000000000 00000000011111111122345667899999999999999875 4
Q ss_pred HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.+.+.+ +++++++++++||++++++| +++.+.|.+||++
T Consensus 239 ~~~~~~~~--p~~~~~~i~~~gH~~~~e~p----~~v~~~i~~fl~k 279 (279)
T d1hkha_ 239 ARRFHQAV--PEADYVEVEGAPHGLLWTHA----DEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHHHC--TTSEEEEETTCCTTHHHHTH----HHHHHHHHHHHHC
T ss_pred HHHHHHhC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHCc
Confidence 56777777 78999999999999996554 6799999999874
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=6.5e-35 Score=227.34 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=160.9
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHH---HHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHH
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC---ISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
+|+|...|. +|+|||+||++.+.. .|..+. ..+.++||+|+++|+||||.|.......++...+++|+.++
T Consensus 21 ~i~y~~~G~-----G~~ivllHG~~~~~~-~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~l 94 (283)
T d2rhwa1 21 NIHYNEAGN-----GETVIMLHGGGPGAG-GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (283)
T ss_dssp EEEEEEECC-----SSEEEEECCCSTTCC-HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred EEEEEEEcC-----CCeEEEECCCCCChh-HHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhcccc
Confidence 788988773 578999999998876 565433 33456799999999999999987665555777888999999
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch--hHHHHHHhhcccccccc-ccc
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SKLHLFMYGLLFGLADT-WAA 194 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~ 194 (323)
++++..+ +++++||||||.+++.+|.++|++ |+++|+++|....+..... ................. ...
T Consensus 95 i~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (283)
T d2rhwa1 95 MDALDID------RAHLVGNAMGGATALNFALEYPDR-IGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQ 167 (283)
T ss_dssp HHHHTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHH
T ss_pred ccccccc------ccccccccchHHHHHHHHHHhhhh-cceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHH
Confidence 9998754 899999999999999999999998 9999999976543322111 11111111111000000 000
Q ss_pred CCCcccccccccChhh-HHHhhcCCcccCCCCCchhHHHHHHh-------hHHHHhcCCcccccEEEEeeCCCcccCchh
Q 020630 195 MPDNKMVGKAIKDPEK-LKVIASNPRRYTGKPRVGTMREIARV-------CQYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
................ ......... ........... ..+....+.++++|+++++|++|.+++++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 241 (283)
T d2rhwa1 168 MLQVFLYDQSLITEELLQGRWEAIQR------QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDH 241 (283)
T ss_dssp HHHHHCSCGGGCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHH
T ss_pred HHHHhhcccccCcHHHHHHHHHHhhh------hhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHH
Confidence 0000000000000000 000000000 00000000000 001234567889999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.+.+.+ +++++++++++||++++++ ++++.+.|.+||++
T Consensus 242 ~~~~~~~~--~~~~~~~i~~~gH~~~~e~----p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 242 GLKLLWNI--DDARLHVFSKCGHWAQWEH----ADEFNRLVIDFLRH 282 (283)
T ss_dssp HHHHHHHS--SSEEEEEESSCCSCHHHHT----HHHHHHHHHHHHHH
T ss_pred HHHHHHhC--CCCEEEEECCCCCchHHhC----HHHHHHHHHHHHhC
Confidence 99999998 7899999999999999554 47799999999975
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=5.3e-34 Score=222.63 Aligned_cols=249 Identities=13% Similarity=0.097 Sum_probs=164.5
Q ss_pred cceeEEecCCC-cEEEEEecCCCC--CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-cCCCCCCCCCC
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-GRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~ 105 (323)
..++.+++.|| .|+++.+.|.+. +++++||++||++++.. .|..+++.|+++||+|+++|+||| |.|++.... +
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~-~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~-~ 81 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDE-F 81 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------C-C
T ss_pred eeeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccC-C
Confidence 35778899999 999999988652 45689999999998876 889999999999999999999998 888765433 4
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
++..+.+|+.++++++.... ..+++|+||||||.+++.+|... . ++++|+.+|...... .........
T Consensus 82 ~~~~~~~dl~~vi~~l~~~~---~~~i~lvG~SmGG~ial~~A~~~--~-v~~li~~~g~~~~~~------~~~~~~~~~ 149 (302)
T d1thta_ 82 TMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISDL--E-LSFLITAVGVVNLRD------TLEKALGFD 149 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTTS--C-CSEEEEESCCSCHHH------HHHHHHSSC
T ss_pred CHHHHHHHHHHHHHhhhccC---CceeEEEEEchHHHHHHHHhccc--c-cceeEeecccccHHH------HHHHHHhhc
Confidence 78889999999999998764 45899999999999999988742 3 899999987754211 111111111
Q ss_pred cccccccccCCCcccccc-cc-cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccC
Q 020630 186 FGLADTWAAMPDNKMVGK-AI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
..... ....+....... .. .............. ........+.++++|+|+++|++|.+||
T Consensus 150 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~i~~PvLii~G~~D~~V~ 212 (302)
T d1thta_ 150 YLSLP-IDELPNDLDFEGHKLGSEVFVRDCFEHHWD----------------TLDSTLDKVANTSVPLIAFTANNDDWVK 212 (302)
T ss_dssp GGGSC-GGGCCSEEEETTEEEEHHHHHHHHHHTTCS----------------SHHHHHHHHTTCCSCEEEEEETTCTTSC
T ss_pred cchhh-hhhccccccccccchhhHHHHHHHHHhHHH----------------HHHHHHHHHhhcCCCEEEEEeCCCCccC
Confidence 00000 000000000000 00 00000000000000 0112345567899999999999999999
Q ss_pred chhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.++.+++.++++++++++++|++|.+. +++ +..+.+.+.+.+++
T Consensus 213 ~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~-~~~~~~~~~~~~~~ 258 (302)
T d1thta_ 213 QEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENL-VVLRNFYQSVTKAA 258 (302)
T ss_dssp HHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceEEEecCCCcccc-cCh-HHHHHHHHHHHHHH
Confidence 99999999999777899999999999986 443 33344444554444
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=8.4e-35 Score=229.92 Aligned_cols=265 Identities=15% Similarity=0.071 Sum_probs=166.0
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~ 106 (323)
++++.++.+.|| +|+|..+|+++ +++|||+||++++.. .|......+ ..+|+|+++|+||||.|+.+. ...++
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~---g~pvvllHG~~g~~~-~~~~~~~~l-~~~~~Vi~~D~rG~G~S~~~~~~~~~~ 84 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPH---GKPVVMLHGGPGGGC-NDKMRRFHD-PAKYRIVLFDQRGSGRSTPHADLVDNT 84 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT---SEEEEEECSTTTTCC-CGGGGGGSC-TTTEEEEEECCTTSTTSBSTTCCTTCC
T ss_pred CCCCCEEEeCCCcEEEEEEecCCC---CCEEEEECCCCCCcc-chHHHhHHh-hcCCEEEEEeccccCCCCccccccchh
Confidence 458889999999 99999999755 788999999987754 455444333 458999999999999998543 34458
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH-------HHH
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK-------LHL 179 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~-------~~~ 179 (323)
++++++|+.++++++..+ +++|+||||||.+++.+|.++|++ |++++++++............ ...
T Consensus 85 ~~~~~~dl~~~~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
T d1azwa_ 85 TWDLVADIERLRTHLGVD------RWQVFGGSWGSTLALAYAQTHPQQ-VTELVLRGIFLLRRFELEWFYQEGASRLFPD 157 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHHHHHHHTSSHHHHCHH
T ss_pred HHHHHHHHHHHHHhhccc------cceeEEecCCcHHHHHHHHHhhhc-eeeeeEeccccccccchhhhhhcccchhhhH
Confidence 999999999999999865 899999999999999999999999 999999987654321100000 000
Q ss_pred HHhhcccccccccccCCCcccccccc-cChhh-----HHHh--hcCCcccCCCCC-------chhHHHHHHhh-------
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAI-KDPEK-----LKVI--ASNPRRYTGKPR-------VGTMREIARVC------- 237 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~------- 237 (323)
....+..................... ..... ..+. ............ ......+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
T d1azwa_ 158 AWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNG 237 (313)
T ss_dssp HHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhc
Confidence 00000000000000000000000000 00000 0000 000000000000 00000000000
Q ss_pred -------HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHH
Q 020630 238 -------QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 238 -------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.......+.+++|+++|+|++|.++|++.++.+.+.+ +++++++++++||+++ +| +..+++.+.+.+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~--p~a~~~~i~~aGH~~~--ep-~~~~~li~a~~~f 312 (313)
T d1azwa_ 238 GFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW--PKAQLQISPASGHSAF--EP-ENVDALVRATDGF 312 (313)
T ss_dssp GGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTT--SH-HHHHHHHHHHHHH
T ss_pred cccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCCCC--Cc-hHHHHHHHHHHHh
Confidence 0122345667899999999999999999999999998 8899999999999875 23 5566677777766
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.4e-34 Score=223.80 Aligned_cols=256 Identities=16% Similarity=0.218 Sum_probs=163.5
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHh
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
+|.+.|| +|+|..+|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+... ++++++++
T Consensus 2 ~f~~~dG~~l~y~~~G~-----g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 74 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWGS-----GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG-NDYDTFAD 74 (271)
T ss_dssp EEECTTSCEEEEEEESS-----SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC-CSHHHHHH
T ss_pred EEEeECCeEEEEEEEcC-----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccc-cccccccc
Confidence 5778899 999999874 467899999998877 899999999989999999999999999876543 48999999
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHH-HHHhhcCCCCeeEEEEccCccCCCCCCc-------hhHHHHHHhhc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATM-LMYFQSEPNTWTGLIFSAPLFVIPENMK-------PSKLHLFMYGL 184 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~-~~a~~~p~~~v~~~il~~~~~~~~~~~~-------~~~~~~~~~~~ 184 (323)
|+.++++.+..+ +++++|||+||.++. .+|..+|++ +.+++++++......... ...........
T Consensus 75 ~~~~~~~~~~~~------~~~~vg~s~gG~~~~~~~a~~~p~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (271)
T d1va4a_ 75 DIAQLIEHLDLK------EVTLVGFSMGGGDVARYIARHGSAR-VAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTEL 147 (271)
T ss_dssp HHHHHHHHHTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred cceeeeeecCCC------cceeeccccccccccccccccccce-eeEEEeecccccccccchhhhhhhhhhHHHHHHHHh
Confidence 999999998754 899999999887655 456667888 999999987654322111 00000000000
Q ss_pred ---ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCCC
Q 020630 185 ---LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 185 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D 259 (323)
.......+...... ................... ................ +....+.++++|+++++|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 222 (271)
T d1va4a_ 148 LKDRAQFISDFNAPFYG-INKGQVVSQGVQTQTLQIA----LLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp HHHHHHHHHHHHHHHHT-GGGTCCCCHHHHHHHHHHH----HHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred hhhhhhhhhhhcchhhc-ccchhhhhhhHHHHHHhhh----hhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCC
Confidence 00000000000000 0000000000000000000 0000011111111110 112345678999999999999
Q ss_pred cccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.++|.+.+.++.+.+. +++++++++++||++++++| +++.+.|.+||++
T Consensus 223 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fL~k 271 (271)
T d1va4a_ 223 QIVPFETTGKVAAELI-KGAELKVYKDAPHGFAVTHA----QQLNEDLLAFLKR 271 (271)
T ss_dssp SSSCGGGTHHHHHHHS-TTCEEEEETTCCTTHHHHTH----HHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHCc
Confidence 9999888777654432 67899999999999996554 6799999999863
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=1.7e-34 Score=221.33 Aligned_cols=245 Identities=13% Similarity=0.030 Sum_probs=159.5
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++|||+||+++++. .|..+++.|+++||+|+++|+||||.|+.+....++.++++.|+..+++.... ..++++
T Consensus 2 G~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l 75 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSA-----DEKVIL 75 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCS-----SSCEEE
T ss_pred CCcEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccc-----cccccc
Confidence 578999999998876 89999999999999999999999999987766666888888888888877654 347999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccc--cccccc-ccCCCcccccccccChhh-
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF--GLADTW-AAMPDNKMVGKAIKDPEK- 210 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~- 210 (323)
+||||||.+++.++.++|++ ++++|++++...................... ...... ..................
T Consensus 76 vghS~Gg~va~~~a~~~p~~-~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T d1xkla_ 76 VGHSLGGMNLGLAMEKYPQK-IYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFL 154 (258)
T ss_dssp EEETTHHHHHHHHHHHCGGG-EEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHH
T ss_pred cccchhHHHHHHHhhhhccc-cceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHH
Confidence 99999999999999999999 9999999876543332222111111111100 000000 000000000000001110
Q ss_pred HHHhhcCCccc-------CCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEE
Q 020630 211 LKVIASNPRRY-------TGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 211 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
........... ...........+ . .......+..+++|+++|+|++|.++|++..+.+.+.+ +++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 230 (258)
T d1xkla_ 155 AHKLYQLCSPEDLALASSLVRPSSLFMEDL-S-KAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GVTEAIE 230 (258)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCBCCCHHHH-H-HCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH--CCSEEEE
T ss_pred HHHhhhcccHHHHHHhhhhhhhhhhhhhhh-h-hhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC--CCCEEEE
Confidence 00000000000 000000000000 0 00012345677899999999999999999999999998 7899999
Q ss_pred ecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++||++++++| +++++.|.+|+++.
T Consensus 231 i~~~gH~~~~e~P----~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 231 IKGADHMAMLCEP----QKLCASLLEIAHKY 257 (258)
T ss_dssp ETTCCSCHHHHSH----HHHHHHHHHHHHHC
T ss_pred ECCCCCchHHhCH----HHHHHHHHHHHHhc
Confidence 9999999997666 66888888888763
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=4.4e-34 Score=219.00 Aligned_cols=243 Identities=13% Similarity=0.067 Sum_probs=155.5
Q ss_pred EEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEE
Q 020630 57 TVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFG 136 (323)
Q Consensus 57 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G 136 (323)
-.|||||+++++. .|..+++.|.++||+|+++|+||||.|+.+....++++++++++.++++.+.. ..+++|+|
T Consensus 4 ~~vliHG~~~~~~-~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~lvG 77 (256)
T d3c70a1 4 HFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP-----GEKVILVG 77 (256)
T ss_dssp EEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCT-----TCCEEEEE
T ss_pred cEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhcc-----ccceeecc
Confidence 4689999998765 89999999999999999999999999987766667899999999999887653 34899999
Q ss_pred echhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccc-ccccc-CCCcccccccccChhhHHHh
Q 020630 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA-DTWAA-MPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 214 (323)
|||||.+++.++..+|++ |+++|++++......................... ..... ....................
T Consensus 78 hS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
T d3c70a1 78 ESCGGLNIAIAADKYCEK-IAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENL 156 (256)
T ss_dssp ETTHHHHHHHHHHHHGGG-EEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHT
T ss_pred cchHHHHHHHHhhcCchh-hhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhh
Confidence 999999999999999999 9999999876543332222111111111100000 00000 00000000000000000000
Q ss_pred hcCCcccC------CCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCC
Q 020630 215 ASNPRRYT------GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 215 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
........ ............. ..........+++|+++|+|++|..+|++..+.+.+.+ +++++++++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~ag 233 (256)
T d3c70a1 157 YTLCGPEEYELAKMLTRKGSLFQNILA-KRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDKVYKVEGGD 233 (256)
T ss_dssp STTSCHHHHHHHHHHCCCBCCCHHHHT-TSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS--CCSEEEECCSCC
T ss_pred hhhcchhhHHHhhhhhhhhhHHHhhhh-hcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHC--CCCEEEEECCCC
Confidence 00000000 0000000000000 00011234556899999999999999999999999988 789999999999
Q ss_pred ccccccCCchhHHHHHHHHHHHHHH
Q 020630 289 HSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
|++++++| +++.+.|.+|+++
T Consensus 234 H~~~~e~P----~~~~~~l~~~~~~ 254 (256)
T d3c70a1 234 HKLQLTKT----KEIAEILQEVADT 254 (256)
T ss_dssp SCHHHHSH----HHHHHHHHHHHHH
T ss_pred CchHHhCH----HHHHHHHHHHHHh
Confidence 99997766 5577888888765
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=5.8e-33 Score=217.20 Aligned_cols=257 Identities=11% Similarity=0.054 Sum_probs=157.7
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC---CCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY---LGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~---~~~ 106 (323)
+..++.. +| +|+|...|. +|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|...... ..+
T Consensus 9 ~~~~~~~-~~~~l~y~~~G~-----gp~vv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~ 80 (293)
T d1ehya_ 9 KHYEVQL-PDVKIHYVREGA-----GPTLLLLHGWPGFWW-EWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLNDLSKYS 80 (293)
T ss_dssp CEEEEEC-SSCEEEEEEEEC-----SSEEEEECCSSCCGG-GGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTCGGGGC
T ss_pred cceEEEE-CCEEEEEEEECC-----CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEecCCcccCCcccccccccccc
Confidence 3444444 56 999998873 679999999998877 89999999976 699999999999999754322 246
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH------HHHH
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK------LHLF 180 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~------~~~~ 180 (323)
++++++|+.++++.++.. +++++||||||.+|+.+|.++|++ +.++|++++............ ....
T Consensus 81 ~~~~a~~~~~~~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (293)
T d1ehya_ 81 LDKAADDQAALLDALGIE------KAYVVGHDFAAIVLHKFIRKYSDR-VIKAAIFDPIQPDFGPVYFGLGHVHESWYSQ 153 (293)
T ss_dssp HHHHHHHHHHHHHHTTCC------CEEEEEETHHHHHHHHHHHHTGGG-EEEEEEECCSCTTC-----------CCHHHH
T ss_pred chhhhhHHHhhhhhcCcc------ccccccccccccchhcccccCccc-cceeeeeeccCccccchhhhhhhhhhhhhhh
Confidence 789999999999988754 899999999999999999999999 999999987643221110000 0000
Q ss_pred Hhhc--ccccccccc---cCCCcccccc------cccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH-H-----HHhc
Q 020630 181 MYGL--LFGLADTWA---AMPDNKMVGK------AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-Y-----IQDN 243 (323)
Q Consensus 181 ~~~~--~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 243 (323)
.... ......... .......... ............ ..............+.... . ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (293)
T d1ehya_ 154 FHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVD----NCMKPDNIHGGFNYYRANIRPDAALWTDLD 229 (293)
T ss_dssp HTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHH----HHTSTTHHHHHHHHHHHHSSSSCCCCCTGG
T ss_pred hhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhh----ccccchhhhhhhhhhhhccccchhhhhhhh
Confidence 0000 000000000 0000000000 000000000000 0000000000111111000 0 0011
Q ss_pred CCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
...+++|+++|+|++|.++|.+...++.+... +++++++++++||++++|+| +++++.|.+||
T Consensus 230 ~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~P----e~~~~~I~~Ff 292 (293)
T d1ehya_ 230 HTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKP----EIAIDRIKTAF 292 (293)
T ss_dssp GSCBCSCEEEEEECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCH----HHHHHHHHHHC
T ss_pred hhccCCceEEEEeCCCCCcCHHHHHHHHHHhC-CCCEEEEECCCCCchHHHCH----HHHHHHHHHhh
Confidence 24578999999999999999877665444332 78999999999999996665 66888898886
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=2.2e-33 Score=227.45 Aligned_cols=292 Identities=12% Similarity=0.045 Sum_probs=174.2
Q ss_pred CCCCCCCccccccccCCccceeEEecCCC-cEEEEEec--C---CCCCCceEEEEecCCCCCcchhh------HHHHHHH
Q 020630 12 NYWGYMPEEEYYTSQGVRNGKEYFETPNG-KLFTQSFL--P---LDQKVKATVYMTHGYGSDTGWMF------QKICISY 79 (323)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~--~---~~~~~~~~vv~~hG~~~~~~~~~------~~~~~~l 79 (323)
++--++...+.....+.+.|++++++.|| .|..+... + .+.+++|+|||+||+++++. .| ..++..|
T Consensus 9 ~~~~~~~~~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~-~~~~~~~~~sla~~L 87 (377)
T d1k8qa_ 9 NPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFIL 87 (377)
T ss_dssp CGGGGCCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHH
T ss_pred CCCcCCCHHHHHHHcCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchh-HHhhcCccchHHHHH
Confidence 33334555666677888999999999999 77766542 2 12356899999999998865 55 3488899
Q ss_pred hcCCcEEEEeccccCcCCCCCCC--------CCCChHHH-HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 80 ATWGYAVFAADLLGHGRSDGIRC--------YLGDMEKV-AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 80 ~~~g~~vi~~d~~G~G~s~~~~~--------~~~~~~~~-~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++||+|+++|+||||.|+.+.. ...+++++ ..|+.++++++....+ ..+++++||||||.+++.+|..
T Consensus 88 ~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g--~~~v~lvGhS~GG~ia~~~a~~ 165 (377)
T d1k8qa_ 88 ADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFST 165 (377)
T ss_dssp HHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHH
T ss_pred HHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcC--CCCEEEEEecchHHHHHHHHHh
Confidence 99999999999999999975322 12345554 3577777777766544 5589999999999999999999
Q ss_pred cCCCCeeEEEEccCccCC---CCCCchhHH-------HHHHhhccccccccc------c-cCCCccccc-----------
Q 020630 151 SEPNTWTGLIFSAPLFVI---PENMKPSKL-------HLFMYGLLFGLADTW------A-AMPDNKMVG----------- 202 (323)
Q Consensus 151 ~p~~~v~~~il~~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~------~-~~~~~~~~~----------- 202 (323)
+|+. +++++++...... ......... ............... . .........
T Consensus 166 ~p~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T d1k8qa_ 166 NPKL-AKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIIC 244 (377)
T ss_dssp CHHH-HTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHH
T ss_pred hhhh-hhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhc
Confidence 9987 7777665433221 111110000 000000000000000 0 000000000
Q ss_pred ---ccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh-----------------------HHHHhcCCcccccEEEEee
Q 020630 203 ---KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-----------------------QYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~P~l~i~g 256 (323)
....+........... ...........+.... ......++++++|+|+|+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G 321 (377)
T d1k8qa_ 245 GFDTMNLNMSRLDVYLSHN---PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNG 321 (377)
T ss_dssp CCCGGGSCGGGHHHHHTTC---CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEE
T ss_pred CCCcccccHHHhhhhhhcc---cccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEe
Confidence 0000000000000000 0000000011110000 0011246788999999999
Q ss_pred CCCcccCchhHHHHHHHhcCCC-CcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 257 TADGVTCPTSSKLLYEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|.+++++.++.+.+.+ ++ .+.++++++||+.++-. .+..+++.+.|.+||++
T Consensus 322 ~~D~~~~~~~~~~l~~~l--p~~~~~~~i~~~GH~d~~~~-~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 322 GNDLLADPHDVDLLLSKL--PNLIYHRKIPPYNHLDFIWA-MDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TTCSSSCHHHHHHHHTTC--TTEEEEEEETTCCTTHHHHC-TTHHHHTHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHC--CCCeEEEEeCCCCCcchhhc-cchHHHHHHHHHHHHhc
Confidence 999999999999999988 44 47888999999844322 35678899999999975
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-34 Score=219.35 Aligned_cols=242 Identities=15% Similarity=0.187 Sum_probs=149.3
Q ss_pred EEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHH
Q 020630 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l 121 (323)
|+|...|.. +++|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+..... ++.+++ +.+..+
T Consensus 2 i~y~~~G~g----~~~lvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~--~~~d~~----~~~~~~ 69 (256)
T d1m33a_ 2 IWWQTKGQG----NVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGFGAL--SLADMA----EAVLQQ 69 (256)
T ss_dssp CCEEEECCC----SSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTCCSCCCC--CHHHHH----HHHHTT
T ss_pred eEEEEECCC----CCeEEEECCCCCCHH-HHHHHHHHHhC-CCEEEEEeCCCCCCccccccc--cccccc----cccccc
Confidence 566666642 578999999998877 89999999975 699999999999999765332 444333 333333
Q ss_pred HhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc----hhHHHHHHhhccc----ccccccc
Q 020630 122 RHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK----PSKLHLFMYGLLF----GLADTWA 193 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~ 193 (323)
. ..+++++||||||.+++.+|.++|+. +++++++++......... ...........+. .....+.
T Consensus 70 ~------~~~~~l~GhS~Gg~ia~~~a~~~p~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T d1m33a_ 70 A------PDKAIWLGWSLGGLVASQIALTHPER-VRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFL 142 (256)
T ss_dssp S------CSSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c------ccceeeeecccchHHHHHHHHhCCcc-cceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHh
Confidence 2 44899999999999999999999999 999999886544322111 0111111111000 0000000
Q ss_pred cCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhH--HHHhcCCcccccEEEEeeCCCcccCchhHHHHH
Q 020630 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
... ..... . ............. .................. +....++++++|+++|+|++|.++|++.++.+.
T Consensus 143 ~~~--~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~ 217 (256)
T d1m33a_ 143 ALQ--TMGTE-T-ARQDARALKKTVL-ALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLD 217 (256)
T ss_dssp HTT--STTST-T-HHHHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CT
T ss_pred hhh--hcccc-c-hhhHHHHHHHhhh-hcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHH
Confidence 000 00000 0 0000000000000 001111111222222111 123566788999999999999999999988888
Q ss_pred HHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 272 EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 272 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+ +++++.+++++||++++++| +++++.|.+|+++
T Consensus 218 ~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~l~~fl~~ 253 (256)
T d1m33a_ 218 KLW--PHSESYIFAKAAHAPFISHP----AEFCHLLVALKQR 253 (256)
T ss_dssp TTC--TTCEEEEETTCCSCHHHHSH----HHHHHHHHHHHTT
T ss_pred HHC--CCCEEEEECCCCCchHHHCH----HHHHHHHHHHHHH
Confidence 877 78999999999999996555 6789999999875
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=6.5e-32 Score=215.68 Aligned_cols=244 Identities=14% Similarity=0.077 Sum_probs=168.4
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
...+.+.+.++. +| +|.++.+.|.+.++.|+||++||++++.. .+..+++.|+++||.|+++|+||+|.|.......
T Consensus 102 ~~~~~e~v~ip~-dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e-~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~ 179 (360)
T d2jbwa1 102 LSPPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIA 179 (360)
T ss_dssp SSSCEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC
T ss_pred CCCCeEEeecCc-CCcccceEEEecCCCCCceEEEEeCCCCccHH-HHHHHHHHHHhcCCEEEEEccccccccCcccccc
Confidence 445567777776 56 99999999987778899999999988876 5667888999999999999999999997655443
Q ss_pred CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 105 GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+.+... ..+++++.....++..+|.|+||||||.+|+.+|...|. |+++|.+++....................
T Consensus 180 ~~~~~~~---~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pr--i~a~V~~~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T d2jbwa1 180 GDYEKYT---SAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR--LAACISWGGFSDLDYWDLETPLTKESWKY 254 (360)
T ss_dssp SCHHHHH---HHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCSCSTTGGGSCHHHHHHHHH
T ss_pred ccHHHHH---HHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCC--cceEEEEcccccHHHHhhhhhhhhHHHHH
Confidence 3455444 445555555444445689999999999999999998875 99999998876543211110000000000
Q ss_pred ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
.. .. ...................+.+++||+|+++|++|. +|.
T Consensus 255 ~~-------------------~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~ 297 (360)
T d2jbwa1 255 VS-------------------KV-----------------DTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPL 297 (360)
T ss_dssp HT-------------------TC-----------------SSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCT
T ss_pred hc-------------------cC-----------------CchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCH
Confidence 00 00 000000000000000134567889999999999998 689
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.++.+++.+..++.+++++++++|... ..+ ......+.+||.+++.+.
T Consensus 298 ~~~~~l~~~~~~~~~~l~~~~~g~H~~~-~~~----~~~~~~i~dWl~~~L~~g 346 (360)
T d2jbwa1 298 SFVDTVLELVPAEHLNLVVEKDGDHCCH-NLG----IRPRLEMADWLYDVLVAG 346 (360)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCCGGGG-GGT----THHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHhcCCCCeEEEEECCCCcCCC-cCh----HHHHHHHHHHHHHHhccC
Confidence 9999999998666678888899999765 233 446778899999998543
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=7.8e-32 Score=204.39 Aligned_cols=229 Identities=13% Similarity=0.212 Sum_probs=153.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|...... ....+..+++..++..+.... ..++++
T Consensus 11 ~~~vvliHG~~~~~~-~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~l 85 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVH-TGPDDWWQDVMNGYEFLKNKG---YEKIAV 85 (242)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTT-CCHHHHHHHHHHHHHHHHHHT---CCCEEE
T ss_pred CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccc-cchhHHHHHHHHHHhhhhhcc---cCceEE
Confidence 678999999998877 899999999999999999999999998754333 255666666666666555442 458999
Q ss_pred EEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHh
Q 020630 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+||||||.+++.++.++|.. .++++++........ .................. ..........
T Consensus 86 ~G~S~Gg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 148 (242)
T d1tqha_ 86 AGLSLGGVFSLKLGYTVPIE---GIVTMCAPMYIKSEE---TMYEGVLEYAREYKKREG-----------KSEEQIEQEM 148 (242)
T ss_dssp EEETHHHHHHHHHHTTSCCS---CEEEESCCSSCCCHH---HHHHHHHHHHHHHHHHHT-----------CCHHHHHHHH
T ss_pred EEcchHHHHhhhhcccCccc---ccccccccccccchh---HHHHHHHHHHHHHhhhcc-----------chhhhHHHHH
Confidence 99999999999999998864 345555444332211 111111111110000000 0000000000
Q ss_pred hcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccccc
Q 020630 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
... .....................+..+++|+|+++|++|..+|++.++.+.+.+.++++++++++++||+.+++
T Consensus 149 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 223 (242)
T d1tqha_ 149 EKF-----KQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLD 223 (242)
T ss_dssp HHH-----TTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGS
T ss_pred hhh-----hhhccchhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccc
Confidence 000 001111222223333334567788999999999999999999999999999877789999999999999864
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 020630 295 EPDENANLVLKDMREWIDE 313 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~ 313 (323)
+ ..+++.+.|.+||++
T Consensus 224 ~---~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 224 Q---EKDQLHEDIYAFLES 239 (242)
T ss_dssp T---THHHHHHHHHHHHHH
T ss_pred c---CHHHHHHHHHHHHHh
Confidence 3 357799999999986
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.98 E-value=2e-31 Score=210.01 Aligned_cols=262 Identities=13% Similarity=0.083 Sum_probs=164.0
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-CCCCC
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-CYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-~~~~~ 106 (323)
+++..++.+.|| +|+|..+|+++ +|+|||+||++++.. .|..+...|++ ||+|+++|+||||.|.... ...++
T Consensus 10 p~~~~~v~~~dG~~i~y~~~G~~~---g~pvvllHG~~~~~~-~w~~~~~~l~~-~~~vi~~D~rG~G~S~~~~~~~~~~ 84 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELSGNPN---GKPAVFIHGGPGGGI-SPHHRQLFDPE-RYKVLLFDQRGCGRSRPHASLDNNT 84 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT---SEEEEEECCTTTCCC-CGGGGGGSCTT-TEEEEEECCTTSTTCBSTTCCTTCS
T ss_pred CCcCCEEEeCCCcEEEEEEecCCC---CCeEEEECCCCCccc-chHHHHHHhhc-CCEEEEEeCCCcccccccccccccc
Confidence 446778899999 99999999865 688999999998876 78877766654 7999999999999997543 33457
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch----------hH
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP----------SK 176 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~----------~~ 176 (323)
...+++|+..+++.+... +++++|||+||.+++.+|..+|++ |.+++++++.......... ..
T Consensus 85 ~~~~~~d~~~~~~~~~~~------~~~~vg~s~g~~~~~~~a~~~~~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
T d1wm1a_ 85 TWHLVADIERLREMAGVE------QWLVFGGSWGSTLALAYAQTHPER-VSEMVLRGIFTLRKQRLHWYYQDGASRFFPE 157 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHHHHHHHTSSGGGTSHH
T ss_pred hhhHHHHHHhhhhccCCC------cceeEeeecCCchhhHHHHHHhhh-heeeeecccccccccccccccccccchhhhh
Confidence 888999999999988755 899999999999999999999999 9999998875432100000 00
Q ss_pred HHHHHhhcccccccccccCCCcccccc-cccCh-------hhHHHhhcCCcccCCCCCc------hhHHHHHHh------
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGK-AIKDP-------EKLKVIASNPRRYTGKPRV------GTMREIARV------ 236 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~------ 236 (323)
............. ........... ..... ................... .........
T Consensus 158 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
T d1wm1a_ 158 KWERVLSILSDDE---RKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFT 234 (313)
T ss_dssp HHHHHHTTSCTTG---GGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhh---hhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhh
Confidence 0000000000000 00000000000 00000 0000000000000000000 000000000
Q ss_pred --------hHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHH
Q 020630 237 --------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 237 --------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
..........+++|+++|+|++|.++|++.++.+.+.+ +++++++++++||.++ +| +..+++.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~--p~a~~~~i~~aGH~~~--eP-~~~~~lv~a~~ 309 (313)
T d1wm1a_ 235 HLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW--PEAELHIVEGAGHSYD--EP-GILHQLMIATD 309 (313)
T ss_dssp TGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTT--SH-HHHHHHHHHHH
T ss_pred hhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHC--CCCEEEEECCCCCCcC--Cc-hHHHHHHHHHH
Confidence 01122344567899999999999999999999999999 8899999999999653 33 33344555555
Q ss_pred HH
Q 020630 309 EW 310 (323)
Q Consensus 309 ~f 310 (323)
+|
T Consensus 310 ~f 311 (313)
T d1wm1a_ 310 RF 311 (313)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.97 E-value=2.2e-31 Score=208.35 Aligned_cols=261 Identities=13% Similarity=0.093 Sum_probs=157.1
Q ss_pred cceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC---C
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL---G 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~---~ 105 (323)
+.+..+...+| +|+|..+|. +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+...... .
T Consensus 7 ~~~~~fi~~~g~~i~y~~~G~-----g~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~ 79 (298)
T d1mj5a_ 7 FGEKKFIEIKGRRMAYIDEGT-----GDPILFQHGNPTSSY-LWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERY 79 (298)
T ss_dssp SSCCEEEEETTEEEEEEEESC-----SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSS
T ss_pred CCCCEEEEECCEEEEEEEEcC-----CCcEEEECCCCCCHH-HHHHHHHHHhcC-CEEEEEeCCCCCCCCCCcccccccc
Confidence 34445556689 999999874 578999999998876 899999999864 999999999999998654321 2
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH----HHHHH
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK----LHLFM 181 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~----~~~~~ 181 (323)
......+++..++..... ..+++++||||||.+++.++.++|++ |.+++++++............ .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (298)
T d1mj5a_ 80 AYAEHRDYLDALWEALDL-----GDRVVLVVHDWGSALGFDWARRHRER-VQGIAYMEAIAMPIEWADFPEQDRDLFQAF 153 (298)
T ss_dssp CHHHHHHHHHHHHHHTTC-----TTCEEEEEEHHHHHHHHHHHHHTGGG-EEEEEEEEECCSCBCGGGSCGGGHHHHHHH
T ss_pred ccchhhhhhccccccccc-----cccCeEEEecccchhHHHHHHHHHhh-hheeeccccccccccchhhhhhhhhhhhhh
Confidence 344444555554444332 34899999999999999999999999 999999886654322211110 00000
Q ss_pred hhcccccc------------cccccCCCcc-----cccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcC
Q 020630 182 YGLLFGLA------------DTWAAMPDNK-----MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF 244 (323)
Q Consensus 182 ~~~~~~~~------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (323)
........ .......... ....................... ..................+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 230 (298)
T d1mj5a_ 154 RSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIP---IAGTPADVVAIARDYAGWL 230 (298)
T ss_dssp HSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSC---BTTBSHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhh---hcchhhhhhhhhhhhhhhh
Confidence 00000000 0000000000 00000000000000000000000 0011111222222344567
Q ss_pred CcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+++|+++++|++|.+.+ ...+.+.+.+ ++.+++++ ++||++++++| +++.+.|.+||++.
T Consensus 231 ~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~--p~~~~~~~-~~GH~~~~e~P----~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 231 SESPIPKLFINAEPGALTT-GRMRDFCRTW--PNQTEITV-AGAHFIQEDSP----DEIGAAIAAFVRRL 292 (298)
T ss_dssp TTCCSCEEEEEEEECSSSS-HHHHHHHTTC--SSEEEEEE-EESSCGGGTCH----HHHHHHHHHHHHHH
T ss_pred hhcceeEEEEecCCCCcCh-HHHHHHHHHC--CCCEEEEe-CCCCchHHhCH----HHHHHHHHHHHhhh
Confidence 8889999999999998665 5566777766 66777666 46999996655 67999999999876
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.97 E-value=4.9e-30 Score=187.89 Aligned_cols=200 Identities=16% Similarity=0.091 Sum_probs=152.7
Q ss_pred eeEEecCCCcEEEEEecCCC--CCCceEEEEecCC---CCCc-chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC
Q 020630 32 KEYFETPNGKLFTQSFLPLD--QKVKATVYMTHGY---GSDT-GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~--~~~~~~vv~~hG~---~~~~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
..++..++|+|......|.. ..+.+++|++|+. |++. ...+..+++.|+++||.|+.+|+||+|.|.+...
T Consensus 10 ~l~i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~--- 86 (218)
T d2fuka1 10 ALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD--- 86 (218)
T ss_dssp EEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC---
T ss_pred EEEEeCCCccEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccC---
Confidence 45677788888777776644 2345677888854 3332 2246778999999999999999999999987543
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcc
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.....+|+.++++++..+.+ ..+++++||||||.+++.+|.+.+ ++++|+++|+.....
T Consensus 87 ~~~~~~~D~~a~~~~~~~~~~--~~~v~l~G~S~Gg~va~~~a~~~~---~~~lil~ap~~~~~~--------------- 146 (218)
T d2fuka1 87 HGDGEQDDLRAVAEWVRAQRP--TDTLWLAGFSFGAYVSLRAAAALE---PQVLISIAPPAGRWD--------------- 146 (218)
T ss_dssp TTTHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHHC---CSEEEEESCCBTTBC---------------
T ss_pred cCcchHHHHHHHHHHHhhccc--CceEEEEEEcccchhhhhhhcccc---cceEEEeCCcccchh---------------
Confidence 355678999999999988865 668999999999999999988743 789999997642100
Q ss_pred cccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCch
Q 020630 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
.....+.+|+|+|+|++|.++|++
T Consensus 147 --------------------------------------------------------~~~~~~~~P~Lvi~G~~D~~vp~~ 170 (218)
T d2fuka1 147 --------------------------------------------------------FSDVQPPAQWLVIQGDADEIVDPQ 170 (218)
T ss_dssp --------------------------------------------------------CTTCCCCSSEEEEEETTCSSSCHH
T ss_pred --------------------------------------------------------hhccccccceeeEecCCCcCcCHH
Confidence 001234689999999999999999
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.++++++.+. ..+++++++|++|++. . ..+++.+.+.+|+++++.
T Consensus 171 ~~~~l~~~~~-~~~~l~~i~ga~H~f~----~-~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 171 AVYDWLETLE-QQPTLVRMPDTSHFFH----R-KLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp HHHHHHTTCS-SCCEEEEETTCCTTCT----T-CHHHHHHHHHHHHGGGCS
T ss_pred HHHHHHHHcc-CCceEEEeCCCCCCCC----C-CHHHHHHHHHHHHHHhcC
Confidence 9999988774 3478999999999765 1 225588889999987764
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=2.5e-31 Score=204.19 Aligned_cols=238 Identities=16% Similarity=0.085 Sum_probs=132.0
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
..+|+|||+||++++.. .|..+++.|++.||+|+++|+||||.|...............+.... ..... ..++
T Consensus 14 ~~~P~ivllHG~~~~~~-~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~ 86 (264)
T d1r3da_ 14 ARTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQ--AHVTS----EVPV 86 (264)
T ss_dssp TTBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHH--TTCCT----TSEE
T ss_pred CCCCeEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhccc--ccccc----cCce
Confidence 34789999999998877 89999999998899999999999999986654322222222222211 11111 4589
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHh--hccc-ccccc----cccCCCcccccccc
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY--GLLF-GLADT----WAAMPDNKMVGKAI 205 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~----~~~~~~~~~~~~~~ 205 (323)
+++||||||.+++.++.++|+. +.+++++.+.................. .... ..... ..............
T Consensus 87 ~lvGhS~Gg~ia~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T d1r3da_ 87 ILVGYSLGGRLIMHGLAQGAFS-RLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSL 165 (264)
T ss_dssp EEEEETHHHHHHHHHHHHTTTT-TSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTC
T ss_pred eeeeecchHHHHHHHHHhCchh-ccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence 9999999999999999999998 888877655443332222211110000 0000 00000 00000000000000
Q ss_pred cChhhHHHhhcCCcccCCCCCchhHHHHHHhh-----HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCc
Q 020630 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 280 (323)
.............. ............. ....+.+..+++|+++++|++|..+ ..+.+. ++++
T Consensus 166 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~---~~~~ 232 (264)
T d1r3da_ 166 NHEQRQTLIAQRSA-----NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES---SGLS 232 (264)
T ss_dssp CHHHHHHHHHHHTT-----SCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH---HCSE
T ss_pred chHHHHHHHHHHhh-----hhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc---CCCe
Confidence 00000000000000 0000000000000 0012334677899999999999643 233333 5789
Q ss_pred EEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 281 ~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++++++||++++++| +++.+.|.+||+...
T Consensus 233 ~~~i~~~gH~~~~e~P----~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 233 YSQVAQAGHNVHHEQP----QAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEETTCCSCHHHHCH----HHHHHHHHHHHHHHC
T ss_pred EEEECCCCCchHHHCH----HHHHHHHHHHHHhcc
Confidence 9999999999996655 679999999998753
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=2e-29 Score=199.36 Aligned_cols=246 Identities=17% Similarity=0.167 Sum_probs=169.1
Q ss_pred cCCccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCC
Q 020630 26 QGVRNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 104 (323)
.++..+++.+++.|| +|..+.+.|.+.++.|+||++||++++.. .|...+..|+++||.|+++|+||+|.|.......
T Consensus 52 ~~~~~~~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~-~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~ 130 (318)
T d1l7aa_ 52 DGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDTSISP 130 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCS
T ss_pred CCeEEEEEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCcc-chHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccc
Confidence 445556778889999 99999999988778899999999998877 7788889999999999999999999997543211
Q ss_pred -----------------CChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 105 -----------------GDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 105 -----------------~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
........|....++.+.....++..++.++|+|+||..++..+...+. +++++...+...
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~--~~~~~~~~~~~~ 208 (318)
T d1l7aa_ 131 HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI--PKAAVADYPYLS 208 (318)
T ss_dssp SCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC--CSEEEEESCCSC
T ss_pred hhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc--cceEEEeccccc
Confidence 1133445677778888877765556689999999999999999999877 777776665432
Q ss_pred CCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHh--hHHHHhcCC
Q 020630 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFS 245 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 245 (323)
.. . ........ .. ............. .......... .......+.
T Consensus 209 ~~-----~----~~~~~~~~-------~~----------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 255 (318)
T d1l7aa_ 209 NF-----E----RAIDVALE-------QP----------YLEINSFFRRNGS-------PETEVQAMKTLSYFDIMNLAD 255 (318)
T ss_dssp CH-----H----HHHHHCCS-------TT----------TTHHHHHHHHSCC-------HHHHHHHHHHHHTTCHHHHGG
T ss_pred cH-----H----HHhhcccc-------cc----------cchhhhhhhcccc-------ccccccccccccccccccccc
Confidence 10 0 00000000 00 0000000000000 0000000000 001233457
Q ss_pred cccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++++|+|+++|++|.++|++.+..+++.++ .++++++++++||... ++..+.+.+||+++++
T Consensus 256 ~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~-~~~~l~~~~~~gH~~~--------~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 256 RVKVPVLMSIGLIDKVTPPSTVFAAYNHLE-TKKELKVYRYFGHEYI--------PAFQTEKLAFFKQILK 317 (318)
T ss_dssp GCCSCEEEEEETTCSSSCHHHHHHHHHHCC-SSEEEEEETTCCSSCC--------HHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEEECCCCCcCHHHHHHHHHHcC-CCcEEEEECCCCCCCc--------HHHHHHHHHHHHHhCC
Confidence 889999999999999999999999999985 3578999999999765 3466778889998875
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=5.7e-29 Score=201.81 Aligned_cols=127 Identities=9% Similarity=0.034 Sum_probs=109.3
Q ss_pred eeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCC------cEEEEeccccCcCCCCCC-CC
Q 020630 32 KEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWG------YAVFAADLLGHGRSDGIR-CY 103 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g------~~vi~~d~~G~G~s~~~~-~~ 103 (323)
.++.++.|| +|||......+ +..++|||+||++++.. .|..+++.|++.| |+||++|+||||.|+.+. ..
T Consensus 83 ~~f~~~i~G~~iHf~h~~~~~-~~~~pLlLlHG~P~s~~-~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 83 PQFTTEIEGLTIHFAALFSER-EDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp CEEEEEETTEEEEEEEECCSC-TTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred CCeEEEECCEEEEEEEEeccC-CCCCEEEEeccccccHH-HHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCC
Confidence 355677899 99998776544 55889999999999876 8999999999887 999999999999999764 34
Q ss_pred CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 104 LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 104 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.++...+++++..+++.+... +.+++|||+||.++..++..+|+. +.+++++.....
T Consensus 161 ~y~~~~~a~~~~~l~~~lg~~------~~~~vg~~~Gg~v~~~~a~~~p~~-~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLGFG------SGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNLCAMR 217 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCT------TCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCCCCC
T ss_pred ccCHHHHHHHHHHHHhhccCc------ceEEEEecCchhHHHHHHHHhhcc-ccceeEeeeccc
Confidence 568999999999999999855 789999999999999999999998 999888766544
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.96 E-value=1.9e-28 Score=187.62 Aligned_cols=243 Identities=16% Similarity=0.128 Sum_probs=169.3
Q ss_pred CccceeEEecCCC-cEEEEEecCCCC-CCceEEEEecCCCCC-cchhhHHHHHHHhcCCcEEEEeccccCcCCCCC---C
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSD-TGWMFQKICISYATWGYAVFAADLLGHGRSDGI---R 101 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~hG~~~~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~---~ 101 (323)
...+.+++++.|| +|.+.++.|.+. ++.|+||++||++.. ..+.|..++..|+++||.|+++|+||++.+... .
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~ 89 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 89 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHT
T ss_pred CceEEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccc
Confidence 3446678999999 999999988763 567899999985432 223667788889999999999999998876522 1
Q ss_pred CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHH
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~ 181 (323)
..........+|+.++++++..... ..++.++|+|+||.+++.++..+|+. +++++..++...... .
T Consensus 90 ~~~~~~~~~~~D~~~~~~~l~~~~~--~~~~~i~g~s~gg~~~~~~~~~~~~~-~~a~i~~~~~~~~~~----------~ 156 (260)
T d2hu7a2 90 IIGDPCGGELEDVSAAARWARESGL--ASELYIMGYSYGGYMTLCALTMKPGL-FKAGVAGASVVDWEE----------M 156 (260)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTC--EEEEEEEEETHHHHHHHHHHHHSTTS-SSEEEEESCCCCHHH----------H
T ss_pred cccccchhhhhhhcccccccccccc--cceeeccccccccccccchhccCCcc-cccccccccchhhhh----------h
Confidence 1111233456788888888887643 56889999999999999999999998 999998888654210 0
Q ss_pred hhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcc
Q 020630 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
........ ..... ...... .+.+... .....+.++++|+|+++|++|.+
T Consensus 157 ~~~~~~~~--------~~~~~---------~~~~~~-------------~~~~~~~-~~~~~~~~~~~P~liihG~~D~~ 205 (260)
T d2hu7a2 157 YELSDAAF--------RNFIE---------QLTGGS-------------REIMRSR-SPINHVDRIKEPLALIHPQNDSR 205 (260)
T ss_dssp HHTCCHHH--------HHHHH---------HHHCSC-------------HHHHHHT-CGGGCGGGCCSCEEEEEETTCSS
T ss_pred hccccccc--------ccccc---------cccccc-------------ccccccc-chhhcccccCCCceeeecccCce
Confidence 00000000 00000 000000 0000000 01344577889999999999999
Q ss_pred cCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 262 TCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 262 ~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|.+.+..+++.+. +..+++++++++||.+.. .+...++.+.+.+||.+++++
T Consensus 206 vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~---~e~~~~~~~~~~~fl~~hl~~ 260 (260)
T d2hu7a2 206 TPLKPLLRLMGELLARGKTFEAHIIPDAGHAINT---MEDAVKILLPAVFFLATQRER 260 (260)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCB---HHHHHHHHHHHHHHHHHHHHC
T ss_pred ecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCC---hHhHHHHHHHHHHHHHHHhcC
Confidence 99999999998873 345689999999998752 456678888999999999863
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.8e-29 Score=193.34 Aligned_cols=103 Identities=14% Similarity=0.085 Sum_probs=89.9
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
.|+|||+||++++.. .|..+++.|.+. ||+|+++|+||||.|..+.. ++++.+++++.++++.+. + ++
T Consensus 2 ~~PvvllHG~~~~~~-~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~--~~~~~~~~~l~~~l~~l~-~------~~ 71 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAVVPIMAKAP-Q------GV 71 (268)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHHHHHHHHCT-T------CE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccc--cCHHHHHHHHHHHHhccC-C------eE
Confidence 567899999999887 899999999874 79999999999999986543 478899999999998875 3 89
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
+|+||||||.+|+.+|.++|+.+|+++|+++++..
T Consensus 72 ~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 72 HLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp EEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred EEEccccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999999999999844999999987543
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=1.2e-26 Score=168.62 Aligned_cols=183 Identities=12% Similarity=0.104 Sum_probs=125.4
Q ss_pred eEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 56 ATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 56 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
+.||++||++++.. ..+..+++.|+++||+|+++|+||+|.+ ..+++++.+...++.. ..+++|
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~--------~~~~~~~~l~~~~~~~-------~~~~~l 66 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP--------RLEDWLDTLSLYQHTL-------HENTYL 66 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC--------CHHHHHHHHHTTGGGC-------CTTEEE
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc--------hHHHHHHHHHHHHhcc-------CCCcEE
Confidence 47999999998753 1367889999999999999999999865 4555555554443321 458999
Q ss_pred EEechhHHHHHHHHhhcCCCC-eeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHH
Q 020630 135 FGESMGGAATMLMYFQSEPNT-WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
+||||||.+++.++.+++... +.+++..+++......... ......
T Consensus 67 vGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------------------~~~~~~------- 113 (186)
T d1uxoa_ 67 VAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM--------------------------LDEFTQ------- 113 (186)
T ss_dssp EEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG--------------------------GGGGTC-------
T ss_pred EEechhhHHHHHHHHhCCccceeeEEeecccccccchhhhh--------------------------hhhhhc-------
Confidence 999999999999999988741 4444445443321111000 000000
Q ss_pred hhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccc
Q 020630 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
... ......++.+|+++++|++|.++|++.++.+++.+ ++++++++++||+...
T Consensus 114 ---~~~--------------------~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~---~~~~~~~~~~gH~~~~ 167 (186)
T d1uxoa_ 114 ---GSF--------------------DHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFLED 167 (186)
T ss_dssp ---SCC--------------------CHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSCGG
T ss_pred ---ccc--------------------cccccccCCCCEEEEecCCCCCCCHHHHHHHHHHc---CCEEEEeCCCCCcCcc
Confidence 000 00111235789999999999999999999999887 4789999999997763
Q ss_pred cCCchhHHHHHHHHHHHHHH
Q 020630 294 GEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 294 ~~~~~~~~~~~~~i~~fl~~ 313 (323)
+ ......++.+.|.+||.+
T Consensus 168 ~-~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 168 E-GFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp G-TCSCCHHHHHHHHHHHHC
T ss_pred c-cCcccHHHHHHHHHHHcC
Confidence 2 222345688888888863
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=1.1e-25 Score=172.15 Aligned_cols=243 Identities=16% Similarity=0.067 Sum_probs=159.9
Q ss_pred CccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCC----CcchhhHHHHHHHhcCCcEEEEeccccCcCCCC
Q 020630 28 VRNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGS----DTGWMFQKICISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~----~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
++.++..+...|| +|.|..+.|++ .++-|+||++||+++ ...+.+......++++||.|+.+|+||.+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~ 80 (258)
T d2bgra2 1 MPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD 80 (258)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred CCceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcch
Confidence 3567888999999 99999999975 233489999999521 222233344556778899999999999875531
Q ss_pred C---CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH
Q 020630 100 I---RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~ 176 (323)
. .....--....+++.++++++.....++..++.++|+|+||.+++.++..+|+. +...+..++.......... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 158 (258)
T d2bgra2 81 KIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV-FKCGIAVAPVSRWEYYDSV-Y 158 (258)
T ss_dssp HHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSC-CSEEEEESCCCCGGGSBHH-H
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCc-ceEEEEeeccccccccccc-c
Confidence 1 000001122356777888888877666677899999999999999999999987 6666666554332111000 0
Q ss_pred HHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcc-cccEEEEe
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVH 255 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~ 255 (323)
..... . .. ............. ....+.++ ++|+++++
T Consensus 159 -~~~~~----~----~~-----------~~~~~~~~~~~~~----------------------~~~~~~~~~~~P~li~h 196 (258)
T d2bgra2 159 -TERYM----G----LP-----------TPEDNLDHYRNST----------------------VMSRAENFKQVEYLLIH 196 (258)
T ss_dssp -HHHHH----C----CC-----------STTTTHHHHHHSC----------------------SGGGGGGGGGSEEEEEE
T ss_pred -cchhc----c----cc-----------cchhhHHHhhccc----------------------ccccccccccCChheee
Confidence 00000 0 00 0000000000000 01222333 47999999
Q ss_pred eCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 256 GTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++|..+|+..++++++.+. +.+++++++++++|.+.. .+..+.+.+.+.+||+++++.
T Consensus 197 G~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 197 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIAS---STAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCS---HHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC---CccHHHHHHHHHHHHHHHhcC
Confidence 99999999999999988873 456899999999998652 455677899999999998753
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.94 E-value=5.6e-26 Score=179.67 Aligned_cols=244 Identities=15% Similarity=0.132 Sum_probs=158.2
Q ss_pred CCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC-
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY- 103 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~- 103 (323)
.+..++..+++.|| +|+++.+.|.+ +++.|+||++||++.+.. .+.. ...++++||.|+++|+||+|.|......
T Consensus 52 ~~~~~~v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~-~~~~-~~~~a~~G~~v~~~D~rG~G~s~~~~~~~ 129 (322)
T d1vlqa_ 52 TVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPHD-WLFWPSMGYICFVMDTRGQGSGWLKGDTP 129 (322)
T ss_dssp SEEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGGG-GCHHHHTTCEEEEECCTTCCCSSSCCCCC
T ss_pred CeEEEEEEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcC-cHHH-HHHHHhCCCEEEEeeccccCCCCCCcccc
Confidence 34456677889999 99999999865 355689999999987654 3332 3467889999999999999998643211
Q ss_pred -----------------------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEE
Q 020630 104 -----------------------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 104 -----------------------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~i 160 (323)
.........|+..+++.+.....++..++.++|+|+||.+++.++...+. +++++
T Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~~--~~a~v 207 (322)
T d1vlqa_ 130 DYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK--AKALL 207 (322)
T ss_dssp BCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS--CCEEE
T ss_pred ccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCCC--ccEEE
Confidence 01123345778888888887766666789999999999999998888765 88888
Q ss_pred EccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHH
Q 020630 161 FSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240 (323)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
...+...... ......... . ............ ............. +.
T Consensus 208 ~~~~~~~~~~---------~~~~~~~~~-------~----------~~~~~~~~~~~~------~~~~~~~~~~~~~-d~ 254 (322)
T d1vlqa_ 208 CDVPFLCHFR---------RAVQLVDTH-------P----------YAEITNFLKTHR------DKEEIVFRTLSYF-DG 254 (322)
T ss_dssp EESCCSCCHH---------HHHHHCCCT-------T----------HHHHHHHHHHCT------TCHHHHHHHHHTT-CH
T ss_pred EeCCccccHH---------HHHhhcccc-------c----------hhhHHhhhhcCc------chhhhHHHHhhhh-hH
Confidence 7766543110 000000000 0 000000000000 0000000000000 12
Q ss_pred HhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
...+.++++|+|+++|++|.++|++.+..+++.++. .++++++++++|... .. .-.+...+||++.+
T Consensus 255 ~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~p~~~H~~~----~~---~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 255 VNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGG----GS---FQAVEQVKFLKKLF 321 (322)
T ss_dssp HHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTT----HH---HHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CeEEEEECCCCCCCc----cc---cCHHHHHHHHHHHh
Confidence 234567899999999999999999999999998854 478999999999654 21 12344568888875
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=1.7e-25 Score=169.07 Aligned_cols=216 Identities=19% Similarity=0.205 Sum_probs=132.6
Q ss_pred CCcEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCC---ChHHHHhhH-
Q 020630 39 NGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLG---DMEKVAASS- 114 (323)
Q Consensus 39 ~g~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~---~~~~~~~d~- 114 (323)
.| +.+....|. +++|+||++||++++.. .|..+++.|+++||.|+++|+||||.|........ .......++
T Consensus 11 ~g-~~~~~~~p~--~~~~~vl~lHG~~~~~~-~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 86 (238)
T d1ufoa_ 11 AG-LSVLARIPE--APKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVAL 86 (238)
T ss_dssp TT-EEEEEEEES--SCCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHH
T ss_pred CC-EEEEecCCC--CCCeEEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHH
Confidence 45 333344454 34899999999999876 78889999999999999999999999975433211 112222222
Q ss_pred ---HHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 115 ---LSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 115 ---~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
.++...+......+..++.++|+|+||.+++.++..+|. +++++.+.+..........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~--~~~~~~~~~~~~~~~~~~~----------------- 147 (238)
T d1ufoa_ 87 GFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR--PRGVLAFIGSGFPMKLPQG----------------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC--CSCEEEESCCSSCCCCCTT-----------------
T ss_pred hHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc--hhheeeeeeeccccccccc-----------------
Confidence 222221111111124589999999999999999999887 5555544333221111000
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHH
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
. ............... ........++|+|+++|++|.++|.+.+..++
T Consensus 148 -~----------~~~~~~~~~~~~~~~---------------------~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 195 (238)
T d1ufoa_ 148 -Q----------VVEDPGVLALYQAPP---------------------ATRGEAYGGVPLLHLHGSRDHIVPLARMEKTL 195 (238)
T ss_dssp -C----------CCCCHHHHHHHHSCG---------------------GGCGGGGTTCCEEEEEETTCTTTTHHHHHHHH
T ss_pred -c----------ccccccccchhhhhh---------------------hhhhhhhcCCCeEEEEcCCCCccCHHHHHHHH
Confidence 0 000000000000000 01112334689999999999999999999999
Q ss_pred HHhcC----CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 272 EKASS----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 272 ~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.+.. .++++.+++|+||... .+ ..+.+.+||.+.+++
T Consensus 196 ~~l~~~~~~~~~~~~~~~g~gH~~~----~~----~~~~~~~f~~~~l~~ 237 (238)
T d1ufoa_ 196 EALRPHYPEGRLARFVEEGAGHTLT----PL----MARVGLAFLEHWLEA 237 (238)
T ss_dssp HHHGGGCTTCCEEEEEETTCCSSCC----HH----HHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCceEEEEEECCCCCccC----HH----HHHHHHHHHHHHhcC
Confidence 88732 2457788899999876 33 345566677666643
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=2.1e-23 Score=154.26 Aligned_cols=205 Identities=17% Similarity=0.203 Sum_probs=156.2
Q ss_pred eeEEecCCCcEEEEEecCCCCCCceEEEEecCC---CCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCCh
Q 020630 32 KEYFETPNGKLFTQSFLPLDQKVKATVYMTHGY---GSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~---~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~ 107 (323)
++.|..++|+|......+ ...+++++|++||. |++.. .....+++.|.+.||.|+.+|+||.|.|.+.... .
T Consensus 2 ev~i~g~~G~Le~~~~~~-~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~---~ 77 (218)
T d2i3da1 2 EVIFNGPAGRLEGRYQPS-KEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH---G 77 (218)
T ss_dssp EEEEEETTEEEEEEEECC-SSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS---S
T ss_pred cEEEeCCCccEEEEEeCC-CCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccccc---c
Confidence 356788888888865544 33567899999984 44422 2456688899999999999999999999876543 3
Q ss_pred HHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 108 EKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
....+|..++++++..+... ..+++++|+|+||.+++.++.+.+. +.+++++.+......
T Consensus 78 ~~e~~d~~aa~~~~~~~~~~-~~~~~~~g~S~G~~~a~~~a~~~~~--~~~~~~~~~~~~~~~----------------- 137 (218)
T d2i3da1 78 AGELSDAASALDWVQSLHPD-SKSCWVAGYSFGAWIGMQLLMRRPE--IEGFMSIAPQPNTYD----------------- 137 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCTT-CCCEEEEEETHHHHHHHHHHHHCTT--EEEEEEESCCTTTSC-----------------
T ss_pred hhHHHHHHHHHhhhhccccc-ccceeEEeeehHHHHHHHHHHhhcc--ccceeeccccccccc-----------------
Confidence 44557888888888776531 3478999999999999999988776 788888876543211
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
...+....+|+++++|+.|.+++....
T Consensus 138 -----------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~ 164 (218)
T d2i3da1 138 -----------------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKDV 164 (218)
T ss_dssp -----------------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHH
T ss_pred -----------------------------------------------------hhhccccCCCceeeecccceecChHHH
Confidence 012334478999999999999999999
Q ss_pred HHHHHHhcC---CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 268 KLLYEKASS---ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 268 ~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
..+.+.+.. ...++.+++|++|++. ...+.+.+.+.+||++++...
T Consensus 165 ~~l~~~~~~~~~~~~~~~vi~gAdHfF~-----g~~~~l~~~v~~~l~~~l~~~ 213 (218)
T d2i3da1 165 NGLVEKLKTQKGILITHRTLPGANHFFN-----GKVDELMGECEDYLDRRLNGE 213 (218)
T ss_dssp HHHHHHHTTSTTCCEEEEEETTCCTTCT-----TCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhccCCCccEEEeCCCCCCCc-----CCHHHHHHHHHHHHHHhcCCC
Confidence 888887742 3458899999999886 234779999999999998654
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.92 E-value=3.8e-24 Score=162.86 Aligned_cols=186 Identities=17% Similarity=0.183 Sum_probs=139.5
Q ss_pred EEEEecCCC--CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 43 FTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 43 ~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
...+|.|.+ +++.|+||++||++++.. .+..+++.|+++||.|+++|++|++.. ......|+.+++++
T Consensus 38 ~~~ly~P~~~~~g~~P~Vv~~HG~~g~~~-~~~~~a~~lA~~Gy~V~~~d~~~~~~~---------~~~~~~d~~~~~~~ 107 (260)
T d1jfra_ 38 GGTIYYPTSTADGTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQ---------PDSRGRQLLSALDY 107 (260)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCC---------HHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCccEEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeeCCCcCC---------chhhHHHHHHHHHH
Confidence 345566643 245689999999998876 678899999999999999999987643 34455677777777
Q ss_pred HHhhC----CCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCC
Q 020630 121 VRHSE----PYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMP 196 (323)
Q Consensus 121 l~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (323)
+.... .++..++.++|||+||.+++.++...+. ++++|.+++....
T Consensus 108 l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~~--~~A~v~~~~~~~~---------------------------- 157 (260)
T d1jfra_ 108 LTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS--LKAAIPLTGWNTD---------------------------- 157 (260)
T ss_dssp HHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCSC----------------------------
T ss_pred HHhhhhhhccccccceEEEeccccchHHHHHHhhhcc--chhheeeeccccc----------------------------
Confidence 66542 2456689999999999999999998776 8888887765321
Q ss_pred CcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh-HHHHHHHhc
Q 020630 197 DNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKAS 275 (323)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~ 275 (323)
..+.++++|+|+++|++|.++|++. .+.+++.+.
T Consensus 158 ---------------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~ 192 (260)
T d1jfra_ 158 ---------------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLP 192 (260)
T ss_dssp ---------------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSC
T ss_pred ---------------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcc
Confidence 1124567899999999999999876 555566553
Q ss_pred -CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 276 -SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 276 -~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+...++++++|++|..... ....+.+.+..||+.+++.
T Consensus 193 ~~~~~~~~~i~ga~H~~~~~----~~~~~~~~~~~wl~~~L~~ 231 (260)
T d1jfra_ 193 GSLDKAYLELRGASHFTPNT----SDTTIAKYSISWLKRFIDS 231 (260)
T ss_dssp TTSCEEEEEETTCCTTGGGS----CCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEEECCCccCCCCC----ChHHHHHHHHHHHHHHhcC
Confidence 2345789999999988732 2355778889999988753
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.92 E-value=9.7e-24 Score=158.13 Aligned_cols=209 Identities=15% Similarity=0.112 Sum_probs=151.6
Q ss_pred ccceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC----
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY---- 103 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~---- 103 (323)
..+.+.+++.|| ++..+...|.+ ++.|.||++|+..+... ....+++.|+++||.|+++|+.|.+........
T Consensus 2 ~~e~v~~~~~dg~~~~a~~~~P~~-~~~P~vl~~h~~~G~~~-~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~ 79 (233)
T d1dina_ 2 LTEGISIQSYDGHTFGALVGSPAK-APAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (233)
T ss_dssp CCTTCCEECTTSCEECEEEECCSS-SSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHH
T ss_pred cceEEEEEcCCCCEEEEEEECCCC-CCceEEEEeCCCCCCCH-HHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHH
Confidence 346778999999 99999999976 78899999998776555 567788999999999999999876655422111
Q ss_pred ----------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCc
Q 020630 104 ----------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 104 ----------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~ 173 (323)
..+.+....|+.+.++++.... ....++.++|+|+||.+++.++... . +.+.+...+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~-~~~~~i~~~G~s~Gg~~a~~~a~~~-~--~~~~~~~~~~~~~~---- 151 (233)
T d1dina_ 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQP-YSNGKVGLVGYCLGGALAFLVAAKG-Y--VDRAVGYYGVGLEK---- 151 (233)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHTST-TEEEEEEEEEETHHHHHHHHHHHHT-C--SSEEEEESCSCGGG----
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCC-CCCCceEEEEecccccceeeccccc-c--cceecccccccccc----
Confidence 1134556678888888887653 2345899999999999999988763 3 45555433211000
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEE
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
..+...++++|+|+
T Consensus 152 ------------------------------------------------------------------~~~~~~~i~~Pvl~ 165 (233)
T d1dina_ 152 ------------------------------------------------------------------QLNKVPEVKHPALF 165 (233)
T ss_dssp ------------------------------------------------------------------GGGGGGGCCSCEEE
T ss_pred ------------------------------------------------------------------chhhhhccCCccee
Confidence 01234567899999
Q ss_pred EeeCCCcccCchhHHHHHHHhc-CCCCcEEEecCCCccccccCCc----hhHHHHHHHHHHHHHH
Q 020630 254 VHGTADGVTCPTSSKLLYEKAS-SADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDE 313 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~ 313 (323)
++|++|..+|.+..+.+.+.+. +++.++++++|++|.+...... +..+..++++.+||..
T Consensus 166 ~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~ 230 (233)
T d1dina_ 166 HMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP 230 (233)
T ss_dssp EEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGG
T ss_pred eecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHc
Confidence 9999999999998888877663 3457899999999987643322 3344557788888864
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=3.9e-25 Score=158.64 Aligned_cols=170 Identities=14% Similarity=0.086 Sum_probs=125.0
Q ss_pred ceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEE
Q 020630 55 KATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFL 134 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l 134 (323)
.++|||+||++++.. .|..+++.|.++||.++.+|.+|++.+...... +.+.+.+++.++++.+. ..++++
T Consensus 2 ~~PVv~vHG~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~~~~l~~~i~~~~~~~~------~~~v~l 72 (179)
T d1ispa_ 2 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN--NGPVLSRFVQKVLDETG------AKKVDI 72 (179)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHH--HHHHHHHHHHHHHHHHC------CSCEEE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHHcCCeEEEEecCCccccccccch--hhhhHHHHHHHHHHhcC------CceEEE
Confidence 457899999998877 899999999999999999999999988644321 34445555555555543 448999
Q ss_pred EEechhHHHHHHHHhhc--CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHH
Q 020630 135 FGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK 212 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (323)
+||||||.++..++.++ +++ |+++|+++++....... . +
T Consensus 73 vGHSmGG~va~~~~~~~~~~~~-V~~~V~l~~p~~g~~~~---------------------~-----l------------ 113 (179)
T d1ispa_ 73 VAHSMGGANTLYYIKNLDGGNK-VANVVTLGGANRLTTGK---------------------A-----L------------ 113 (179)
T ss_dssp EEETHHHHHHHHHHHHSSGGGT-EEEEEEESCCGGGTCSB---------------------C-----C------------
T ss_pred EeecCcCHHHHHHHHHcCCchh-hCEEEEECCCCCCchhh---------------------h-----c------------
Confidence 99999999999999876 566 99999998754321100 0 0
Q ss_pred HhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCcccc
Q 020630 213 VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
........+|++.++|..|.++++..+ .+ ++++.+.+++.+|..+
T Consensus 114 ----------------------------~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l--~~~~~~~~~~~~H~~l 158 (179)
T d1ispa_ 114 ----------------------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RL--DGARNVQIHGVGHIGL 158 (179)
T ss_dssp ----------------------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CC--BTSEEEEESSCCTGGG
T ss_pred ----------------------------CCcccccCceEEEEEecCCcccCchhh-----cC--CCceEEEECCCCchhh
Confidence 000122367999999999999987643 34 6788889999999988
Q ss_pred ccCCchhHHHHHHHHHHHHH
Q 020630 293 QGEPDENANLVLKDMREWID 312 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.++ ++.+.+.+||+
T Consensus 159 ~~~~-----~v~~~i~~~L~ 173 (179)
T d1ispa_ 159 LYSS-----QVNSLIKEGLN 173 (179)
T ss_dssp GGCH-----HHHHHHHHHHT
T ss_pred ccCH-----HHHHHHHHHHh
Confidence 5443 37777888875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.1e-23 Score=157.32 Aligned_cols=191 Identities=17% Similarity=0.186 Sum_probs=132.6
Q ss_pred CCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcC---------CC-----CCCCCCC---ChHHHH
Q 020630 49 PLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGR---------SD-----GIRCYLG---DMEKVA 111 (323)
Q Consensus 49 ~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~---------s~-----~~~~~~~---~~~~~~ 111 (323)
|...+..++|||+||+|++.. .|..+...+...++.+++++-|.+.. +. ....... .+++..
T Consensus 15 p~~~~~~~~VI~lHG~G~~~~-~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~ 93 (229)
T d1fj2a_ 15 PAARKATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAA 93 (229)
T ss_dssp CCSSCCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHH
T ss_pred CCCCCCCCEEEEEcCCCCCHH-HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHH
Confidence 433355789999999998876 67777777877889999988653211 10 0011111 134445
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccc
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+.+..+++..... .++..+++++|+|+||.+|+.++.++|+. ++++|.+++........
T Consensus 94 ~~l~~li~~~~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~-~~gvi~~sg~lp~~~~~------------------- 152 (229)
T d1fj2a_ 94 ENIKALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQK-LAGVTALSCWLPLRASF------------------- 152 (229)
T ss_dssp HHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHTTCSSC-CSEEEEESCCCTTGGGS-------------------
T ss_pred HHHHHHhhhhhhc-CCCccceeeeecccchHHHHHHHHhhccc-cCccccccccccccccc-------------------
Confidence 5666666665433 45577999999999999999999999998 99999988753211000
Q ss_pred cccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHH
Q 020630 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
.. . .......++|++++||++|.++|.+.++...
T Consensus 153 -~~--------~-------------------------------------~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~ 186 (229)
T d1fj2a_ 153 -PQ--------G-------------------------------------PIGGANRDISILQCHGDCDPLVPLMFGSLTV 186 (229)
T ss_dssp -CS--------S-------------------------------------CCCSTTTTCCEEEEEETTCSSSCHHHHHHHH
T ss_pred -cc--------c-------------------------------------ccccccccCceeEEEcCCCCeeCHHHHHHHH
Confidence 00 0 0001123579999999999999999888777
Q ss_pred HHhc----CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 272 EKAS----SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 272 ~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+. +.+++++++++.||... .+..+.+.+||++++
T Consensus 187 ~~L~~~~~~~~v~~~~~~g~gH~i~--------~~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 187 EKLKTLVNPANVTFKTYEGMMHSSC--------QQEMMDVKQFIDKLL 226 (229)
T ss_dssp HHHHHHSCGGGEEEEEETTCCSSCC--------HHHHHHHHHHHHHHS
T ss_pred HHHHhcCCCCceEEEEeCCCCCccC--------HHHHHHHHHHHHhHC
Confidence 7662 34678889999999876 234677899999886
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.2e-24 Score=166.25 Aligned_cols=231 Identities=16% Similarity=0.142 Sum_probs=146.9
Q ss_pred CCC-cEEEEEecCCC---CCCceEEEEecCCCCC----cchhhHHHHHHHhcCCcEEEEeccccCcCCCCC---CCCCCC
Q 020630 38 PNG-KLFTQSFLPLD---QKVKATVYMTHGYGSD----TGWMFQKICISYATWGYAVFAADLLGHGRSDGI---RCYLGD 106 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~---~~~~~~ 106 (323)
.|| +|.+.++.|.+ +++.|+||++||.++. ..|........|+++||.|+++|+||.+.+... .....-
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~ 89 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 89 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccc
Confidence 589 99999999975 3345899999996321 222333345578899999999999985433210 000001
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCC---CeeEEEEccCccCCCCCCchhHHHHHHhh
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
.....+|+.++++++..+..++..++.++|+|+||.+++.++...++. .+...+...+........... ......
T Consensus 90 g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 167 (258)
T d1xfda2 90 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF--SERYLG 167 (258)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH--HHHHHC
T ss_pred hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccc--cccccc
Confidence 123467888999999888777778999999999999999888765542 155555555543322111100 000000
Q ss_pred cccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCc-ccccEEEEeeCCCccc
Q 020630 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK-VTVPFLTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~ 262 (323)
. ... +...+... . ....+.+ .++|+|+++|+.|..+
T Consensus 168 ~-~~~----------------------------~~~~~~~~-s-------------~~~~~~~~~~~p~Li~hG~~D~~v 204 (258)
T d1xfda2 168 L-HGL----------------------------DNRAYEMT-K-------------VAHRVSALEEQQFLIIHPTADEKI 204 (258)
T ss_dssp C-CSS----------------------------CCSSTTTT-C-------------THHHHTSCCSCEEEEEEETTCSSS
T ss_pred c-ccc----------------------------chHHhhcc-c-------------hhhhhhhhhcccccccccCCCCCc
Confidence 0 000 00000000 0 0111122 3689999999999999
Q ss_pred CchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 263 CPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|++.+.++.+.+. +.+.+++++++++|.+.. .+....+.+.+.+||+++++
T Consensus 205 p~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~---~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 205 HFQHTAELITQLIRGKANYSLQIYPDESHYFTS---SSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCC---HHHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC---CcCHHHHHHHHHHHHHHhhC
Confidence 9999988888763 346789999999998752 34556678999999988753
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.91 E-value=5e-23 Score=151.18 Aligned_cols=187 Identities=14% Similarity=0.111 Sum_probs=138.1
Q ss_pred EecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCC---C--CCCCCC---hHHHHhhHHHH
Q 020630 46 SFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDG---I--RCYLGD---MEKVAASSLSF 117 (323)
Q Consensus 46 ~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~---~--~~~~~~---~~~~~~d~~~~ 117 (323)
++.|...+++|+||++||+|++.. .|..+++.+.+ ++.|++++.+..+.... . .....+ .....+++..+
T Consensus 5 i~~~~~~~~~P~vi~lHG~g~~~~-~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (202)
T d2h1ia1 5 VFQKGKDTSKPVLLLLHGTGGNEL-DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEF 82 (202)
T ss_dssp EEECCSCTTSCEEEEECCTTCCTT-TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCEEEEECCCCCCHH-HHHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHH
Confidence 455655567899999999998876 78888888876 69999987654333211 0 000112 33345667777
Q ss_pred HHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCC
Q 020630 118 FKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
+..+..+..++..+++++|+|+||.+++.++..+|+. +.+++++++.......
T Consensus 83 i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~-~~~~~~~~~~~~~~~~-------------------------- 135 (202)
T d2h1ia1 83 LDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENA-LKGAVLHHPMVPRRGM-------------------------- 135 (202)
T ss_dssp HHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCSCSSC--------------------------
T ss_pred HHHHHHhccccccceeeecccccchHHHHHHHhcccc-ccceeeecCCCCcccc--------------------------
Confidence 7777777777788999999999999999999999998 9999998875431100
Q ss_pred cccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCC
Q 020630 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
........|+++++|++|.++|++.++++.+.+...
T Consensus 136 --------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~ 171 (202)
T d2h1ia1 136 --------------------------------------------QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENA 171 (202)
T ss_dssp --------------------------------------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT
T ss_pred --------------------------------------------cccccccchhhcccccCCCccCHHHHHHHHHHHHHC
Confidence 111234679999999999999999999999888532
Q ss_pred --CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 278 --DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 278 --~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++++.+++ ||.+. .+..+.+.+||+++
T Consensus 172 g~~~~~~~~~g-gH~~~--------~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 172 NANVTMHWENR-GHQLT--------MGEVEKAKEWYDKA 201 (202)
T ss_dssp TCEEEEEEESS-TTSCC--------HHHHHHHHHHHHHH
T ss_pred CCCEEEEEECC-CCcCC--------HHHHHHHHHHHHHh
Confidence 467888885 89765 33567889999875
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.90 E-value=3.8e-23 Score=159.28 Aligned_cols=217 Identities=14% Similarity=0.141 Sum_probs=138.4
Q ss_pred CCceEEEEecCCC-CCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCC--CCChHHHHhhHHHHHHHHHhhCCCCC
Q 020630 53 KVKATVYMTHGYG-SDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCY--LGDMEKVAASSLSFFKHVRHSEPYRD 129 (323)
Q Consensus 53 ~~~~~vv~~hG~~-~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~d~~~~i~~l~~~~~~~~ 129 (323)
..+|++||+||+. +...+.|..+++.|... ++|+++|+||||.+...... ..+++++++++.+.|..... .
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~-~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~-----~ 131 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEE-RDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----D 131 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTT-CCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----T
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCC-ceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcC-----C
Confidence 4578999999963 23334899999999874 99999999999988754332 23788888887765544332 3
Q ss_pred CCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccc
Q 020630 130 LPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
.+++|+||||||.+|+.+|.+. +.. |.++|++++...........+. ......+..
T Consensus 132 ~P~vL~GhS~GG~vA~e~A~~l~~~~g~~-v~~LvL~d~~~~~~~~~~~~~~-~~~~~~~~~------------------ 191 (283)
T d2h7xa1 132 APVVLLGHSGGALLAHELAFRLERAHGAP-PAGIVLVDPYPPGHQEPIEVWS-RQLGEGLFA------------------ 191 (283)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCC-CSEEEEESCCCTTCCHHHHHTH-HHHHHHHHH------------------
T ss_pred CceEEEEeccchHHHHHHHHhhHHHcCCC-ceEEEEecCCccccccchhhhh-hhhHHHhhc------------------
Confidence 4899999999999999999864 455 9999999876543221111110 000000000
Q ss_pred cChhhHHHhhcCCcccCCCCCchhHHHHHHhhHH-HHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEe
Q 020630 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
..... ........+...... .......+++|+++++|++|..++.+....+.+.+. ...+++.+
T Consensus 192 ----------~~~~~----~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~-~~~~~~~v 256 (283)
T d2h7xa1 192 ----------GELEP----MSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWD-LPHTVADV 256 (283)
T ss_dssp ----------TCSSC----CCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCS-SCSEEEEE
T ss_pred ----------ccccc----cccHHHHHHHHHHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEEE
Confidence 00000 000000111111111 123356789999999999999998887766665553 34688889
Q ss_pred cCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 285 DGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++ +|+.+++ +..+.+.+.|.+||++.
T Consensus 257 ~G-~H~~ml~---e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 257 PG-DHFTMMR---DHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp SS-CTTHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cC-CCccccc---CCHHHHHHHHHHHHHhc
Confidence 86 8987653 34678999999999863
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=1.4e-23 Score=157.68 Aligned_cols=211 Identities=11% Similarity=0.006 Sum_probs=124.9
Q ss_pred CceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE
Q 020630 54 VKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF 133 (323)
Q Consensus 54 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~ 133 (323)
.+++|||+||++++.. .|..+++.|. +|.|+++|++|+|. .++++.+.|..+.. ..+++
T Consensus 16 ~~~~l~~lhg~~g~~~-~~~~la~~L~--~~~v~~~~~~g~~~-------------~a~~~~~~i~~~~~-----~~~~~ 74 (230)
T d1jmkc_ 16 QEQIIFAFPPVLGYGL-MYQNLSSRLP--SYKLCAFDFIEEED-------------RLDRYADLIQKLQP-----EGPLT 74 (230)
T ss_dssp CSEEEEEECCTTCCGG-GGHHHHHHCT--TEEEEEECCCCSTT-------------HHHHHHHHHHHHCC-----SSCEE
T ss_pred CCCeEEEEcCCCCCHH-HHHHHHHHCC--CCEEeccCcCCHHH-------------HHHHHHHHHHHhCC-----CCcEE
Confidence 3789999999999876 8999999994 69999999998863 23445555554432 34899
Q ss_pred EEEechhHHHHHHHHhhcCCC--CeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhH
Q 020630 134 LFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
|+||||||.+|+.+|.++|++ .+..++.+.+....................+....... .....+...
T Consensus 75 lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 144 (230)
T d1jmkc_ 75 LFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDN----------EALNSEAVK 144 (230)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTC----------SGGGSHHHH
T ss_pred EEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccc----------cccccHHHH
Confidence 999999999999999886543 15666665554332211111000000000000000000 000000000
Q ss_pred HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCCccc
Q 020630 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
..+. ........ ..........+++|+++++|++|..++.... .+.+... .+.+++.+++ ||+.
T Consensus 145 ~~~~------------~~~~~~~~-~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~~-~~~~~~~i~g-~H~~ 208 (230)
T d1jmkc_ 145 HGLK------------QKTHAFYS-YYVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEATT-GAYRMKRGFG-THAE 208 (230)
T ss_dssp HHHH------------HHHHHHHH-HHHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGBS-SCEEEEECSS-CGGG
T ss_pred HHHH------------HHHHHHHH-hhhcccccccccCcceeeeecCCcccchhHH-HHHHhcc-CCcEEEEEcC-CChh
Confidence 0000 00001111 1112345678899999999999998886543 3333332 4578888885 9998
Q ss_pred cccCCchhHHHHHHHHHHHHHH
Q 020630 292 IQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++| ..+++.+.|.+||++
T Consensus 209 ml~~~--~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 209 MLQGE--TLDRNAGILLEFLNT 228 (230)
T ss_dssp TTSHH--HHHHHHHHHHHHHTC
T ss_pred hcCCc--cHHHHHHHHHHHHhh
Confidence 87543 467899999999874
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3.7e-24 Score=165.86 Aligned_cols=111 Identities=15% Similarity=0.229 Sum_probs=83.0
Q ss_pred EecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+..++| .|.+...... .+++|||+||++++.. .|..+++.| +++|+++|+||+|.|+ ++++++++
T Consensus 7 ~~~~~~~~l~~l~~~~~---~~~Pl~l~Hg~~gs~~-~~~~l~~~L---~~~v~~~d~~g~~~~~-------~~~~~a~~ 72 (286)
T d1xkta_ 7 LVNPEGPTLMRLNSVQS---SERPLFLVHPIEGSTT-VFHSLASRL---SIPTYGLQCTRAAPLD-------SIHSLAAY 72 (286)
T ss_dssp CCCTTSCSEEECCCCCC---CSCCEEEECCTTCCCG-GGHHHHHTC---SSCEEEECCCTTSCCS-------CHHHHHHH
T ss_pred hcCCCCCEEEEecCCCC---CCCeEEEECCCCccHH-HHHHHHHHc---CCeEEEEeCCCCCCCC-------CHHHHHHH
Confidence 345677 7765554443 3667999999999987 899998877 4899999999999875 67888887
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~ 165 (323)
....+..+.. .++++|+||||||.+|+.+|.++|++ +.++++++..
T Consensus 73 ~~~~~~~~~~-----~~~~~lvGhS~Gg~vA~~~A~~~p~~-~~~v~~l~~~ 118 (286)
T d1xkta_ 73 YIDCIRQVQP-----EGPYRVAGYSYGACVAFEMCSQLQAQ-QSPAPTHNSL 118 (286)
T ss_dssp HHHHHHHHCC-----SSCCEEEEETHHHHHHHHHHHHHHHC-------CCEE
T ss_pred HHHHHHHhcC-----CCceEEeecCCccHHHHHHHHHHHHc-CCCceeEEEe
Confidence 7766665543 34899999999999999999999998 8888776543
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.90 E-value=1.7e-22 Score=148.72 Aligned_cols=188 Identities=15% Similarity=0.069 Sum_probs=131.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccC-----cCCCCCCCCCCCh---HHHHh
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGH-----GRSDGIRCYLGDM---EKVAA 112 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-----G~s~~~~~~~~~~---~~~~~ 112 (323)
.+.|+...+.. +++|+||++||+|++.. .|..+++.|.+ ++.+++++.+.. +..........+. ...++
T Consensus 10 ~~~~~~~~~~~-~~~p~vv~lHG~g~~~~-~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (209)
T d3b5ea1 10 AFPYRLLGAGK-ESRECLFLLHGSGVDET-TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETA 86 (209)
T ss_dssp SSCEEEESTTS-SCCCEEEEECCTTBCTT-TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHH
T ss_pred cceeEecCCCC-CCCCEEEEEcCCCCCHH-HHHHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHH
Confidence 44566666544 67899999999999877 78889999986 589998865421 1110001111122 33345
Q ss_pred hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhccccccccc
Q 020630 113 SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
++.++|+.+..+..++..+++++|||+||.+++.++.++|+. ++++++++|.......
T Consensus 87 ~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~-~~~~v~~~g~~~~~~~--------------------- 144 (209)
T d3b5ea1 87 AFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGI-VRLAALLRPMPVLDHV--------------------- 144 (209)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTS-CSEEEEESCCCCCSSC---------------------
T ss_pred HHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCc-ceEEEEeCCccccccc---------------------
Confidence 666667777766666688999999999999999999999999 9999999875431100
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHH
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
......++|+++++|++|.+++ +.+.++.+
T Consensus 145 -------------------------------------------------~~~~~~~~p~~~~~G~~D~~~~-~~~~~~~~ 174 (209)
T d3b5ea1 145 -------------------------------------------------PATDLAGIRTLIIAGAADETYG-PFVPALVT 174 (209)
T ss_dssp -------------------------------------------------CCCCCTTCEEEEEEETTCTTTG-GGHHHHHH
T ss_pred -------------------------------------------------cccccccchheeeeccCCCccC-HHHHHHHH
Confidence 0112236899999999999987 45566666
Q ss_pred Hhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHH
Q 020630 273 KAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 273 ~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+. +.++++.++++ ||.+. . ...+.+.+||.
T Consensus 175 ~l~~~G~~v~~~~~~g-gH~i~----~----~~~~~~~~wl~ 207 (209)
T d3b5ea1 175 LLSRHGAEVDARIIPS-GHDIG----D----PDAAIVRQWLA 207 (209)
T ss_dssp HHHHTTCEEEEEEESC-CSCCC----H----HHHHHHHHHHH
T ss_pred HHHHCCCCeEEEEECC-CCCCC----H----HHHHHHHHHhC
Confidence 653 34578899987 79886 2 24566788884
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.89 E-value=1.6e-22 Score=158.93 Aligned_cols=257 Identities=12% Similarity=0.092 Sum_probs=157.6
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc--hhhHHHH---HHHhcCCcEEEEeccccCcCCCCCC--------------
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKIC---ISYATWGYAVFAADLLGHGRSDGIR-------------- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~---~~l~~~g~~vi~~d~~G~G~s~~~~-------------- 101 (323)
+|.|..||.-+....++||++|++.+++. ..|..++ +.|....|.||++|..|.|.++..+
T Consensus 30 ~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg 109 (376)
T d2vata1 30 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYG 109 (376)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCG
T ss_pred eEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCccc
Confidence 67899999865455789999999988753 1344332 2344456999999999887543111
Q ss_pred --CCCCChHHHHhhHHHHHHHHHhhCCCCCCCE-EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 102 --CYLGDMEKVAASSLSFFKHVRHSEPYRDLPA-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 102 --~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
....++.++++....++++|+.+ ++ .|+|.||||+.|+++|..+|+. |+++|.+++.......... .
T Consensus 110 ~~FP~~ti~D~v~aq~~ll~~LGI~------~l~aViG~SmGGmqal~wa~~~Pd~-v~~li~Ia~~~~~s~~~~a---~ 179 (376)
T d2vata1 110 AKFPRTTIRDDVRIHRQVLDRLGVR------QIAAVVGASMGGMHTLEWAFFGPEY-VRKIVPIATSCRQSGWCAA---W 179 (376)
T ss_dssp GGCCCCCHHHHHHHHHHHHHHHTCC------CEEEEEEETHHHHHHHHHGGGCTTT-BCCEEEESCCSBCCHHHHH---H
T ss_pred ccCCcchhHHHHHHHHHHHHHhCcc------eEEEeecccHHHHHHHHHHHhchHH-HhhhcccccccccchHHHH---H
Confidence 11247889998888999999876 66 5899999999999999999999 9999999876653321100 0
Q ss_pred HHHhhcccccccccccCC----Cc-------------------ccccccc------------c-----------------
Q 020630 179 LFMYGLLFGLADTWAAMP----DN-------------------KMVGKAI------------K----------------- 206 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~----~~-------------------~~~~~~~------------~----------------- 206 (323)
.......-..-+.|.... .. ..+...+ .
T Consensus 180 ~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~ 259 (376)
T d2vata1 180 FETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSH 259 (376)
T ss_dssp HHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-----------------------
T ss_pred HHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccccccccccc
Confidence 000000000000000000 00 0000000 0
Q ss_pred -----ChhhHHHhhcCCcccCCCCCchhHHHHHHhhH----------HHHhcCCcccccEEEEeeCCCcccCchhHHHHH
Q 020630 207 -----DPEKLKVIASNPRRYTGKPRVGTMREIARVCQ----------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 207 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
......++......+........+..+.+..+ ++.+.+++|++|+|+|.++.|.++|++..++++
T Consensus 260 ~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a 339 (376)
T d2vata1 260 RAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMG 339 (376)
T ss_dssp ----CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHH
Confidence 00001111110011111111122222222211 133457889999999999999999999999999
Q ss_pred HHhcCCCCcEEEec-CCCccccccCCchhHHHHHHHHHHHHHH
Q 020630 272 EKASSADKSIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 272 ~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+ +++++.+|+ ..||..++.+ .+.+.+.|.+||++
T Consensus 340 ~~l--~~a~~~~I~S~~GHDaFL~e----~~~~~~~I~~FL~q 376 (376)
T d2vata1 340 RSI--PNSRLCVVDTNEGHDFFVME----ADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHS--TTEEEEECCCSCGGGHHHHT----HHHHHHHHHHHHTC
T ss_pred Hhc--CCCeEEEECCCCCccccccC----HHHHHHHHHHHHcC
Confidence 999 789999998 5799877533 46788999999863
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.88 E-value=2.2e-21 Score=151.34 Aligned_cols=259 Identities=11% Similarity=0.105 Sum_probs=157.4
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcch--------hhHHHH---HHHhcCCcEEEEeccccCcCCCCCC--------
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGW--------MFQKIC---ISYATWGYAVFAADLLGHGRSDGIR-------- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~--------~~~~~~---~~l~~~g~~vi~~d~~G~G~s~~~~-------- 101 (323)
+|.|..||..+....++||++|++.+++.- .|..++ ..|....|.||++|+.|.|.++..+
T Consensus 25 ~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~tg 104 (357)
T d2b61a1 25 NVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTG 104 (357)
T ss_dssp EEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTS
T ss_pred eEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCCC
Confidence 789999997664556899999999887531 233332 3344446999999999977644211
Q ss_pred ------CCCCChHHHHhhHHHHHHHHHhhCCCCCCCE-EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCch
Q 020630 102 ------CYLGDMEKVAASSLSFFKHVRHSEPYRDLPA-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ------~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~ 174 (323)
....++.++++....++++++.+ ++ .++|.||||+.|+++|.++|+. |+++|.+++.......
T Consensus 105 ~~~g~~FP~iti~D~v~aq~~Ll~~LGI~------~l~~viG~SmGGmqAl~wa~~~Pd~-v~~~i~i~~~a~~s~~--- 174 (357)
T d2b61a1 105 KPYGSQFPNIVVQDIVKVQKALLEHLGIS------HLKAIIGGSFGGMQANQWAIDYPDF-MDNIVNLCSSIYFSAE--- 174 (357)
T ss_dssp SBCGGGCCCCCHHHHHHHHHHHHHHTTCC------CEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSSCCHH---
T ss_pred CCCCcccccchhHHHHHHHHHHHHHhCcc------eEEEEecccHHHHHHHHHHHhhhHH-Hhhhcccccccccchh---
Confidence 11347888898889999999876 67 5789999999999999999999 9999999876543221
Q ss_pred hHHHHHHhhcccccccccccC-------CCccc------ccccccChh----------------------hHHHhhcCCc
Q 020630 175 SKLHLFMYGLLFGLADTWAAM-------PDNKM------VGKAIKDPE----------------------KLKVIASNPR 219 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~------~~~~~~~~~----------------------~~~~~~~~~~ 219 (323)
...........-..-+.|... +...+ ....+.... ...++.....
T Consensus 175 ~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~ 254 (357)
T d2b61a1 175 AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGK 254 (357)
T ss_dssp HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHH
Confidence 111111111000000111000 00000 000000000 0111111001
Q ss_pred ccCCCCCchhHHHHHHhhH---------HHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecC-C
Q 020630 220 RYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDG-M 287 (323)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~ 287 (323)
.+........+..+.+..+ ++.+.+++|++|+|+|..+.|.++|++..+.+++.++ +.++++++++. .
T Consensus 255 kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~ 334 (357)
T d2b61a1 255 KFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDY 334 (357)
T ss_dssp HHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 1111112222222222221 1334578999999999999999999999999988884 23568888886 5
Q ss_pred CccccccCCchhHHHHHHHHHHHHHH
Q 020630 288 YHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 288 gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
||..++.+ .+++.+.|.+||+.
T Consensus 335 GHdafL~e----~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 335 GHDAFLVD----YDQFEKRIRDGLAG 356 (357)
T ss_dssp GGGHHHHC----HHHHHHHHHHHHHT
T ss_pred CccccCcC----HHHHHHHHHHHHcc
Confidence 99988543 46688889999863
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.88 E-value=4.3e-21 Score=149.95 Aligned_cols=258 Identities=10% Similarity=0.110 Sum_probs=158.3
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcc------------hhhHHHH---HHHhcCCcEEEEeccccCcCCCCCC----
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG------------WMFQKIC---ISYATWGYAVFAADLLGHGRSDGIR---- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~------------~~~~~~~---~~l~~~g~~vi~~d~~G~G~s~~~~---- 101 (323)
+|.|..||..+....++||++|++.+++. ..|..++ +.|....|.||++|..|.|.|+.++
T Consensus 28 ~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~~ 107 (362)
T d2pl5a1 28 VIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIH 107 (362)
T ss_dssp EEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBC
T ss_pred eEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccccc
Confidence 78999999765455689999999987631 1233322 2344446999999999988765321
Q ss_pred ----------CCCCChHHHHhhHHHHHHHHHhhCCCCCCCEE-EEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC
Q 020630 102 ----------CYLGDMEKVAASSLSFFKHVRHSEPYRDLPAF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 102 ----------~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~ 170 (323)
....++.++++....++++++.+ ++. ++|.||||+.|+++|..||+. |+++|.+++......
T Consensus 108 p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~------~l~~viG~SmGGmqAl~wA~~yPd~-v~~~v~ia~sa~~s~ 180 (362)
T d2pl5a1 108 PETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE------KLFCVAGGSMGGMQALEWSIAYPNS-LSNCIVMASTAEHSA 180 (362)
T ss_dssp TTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS------SEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSBCCH
T ss_pred cccccccCcCCccchhHHHHHHHHHHHHHhCcC------eeEEEeehhHHHHHHHHHHHhCchH-hhhhcccccccccCH
Confidence 11236778888888889998876 565 889999999999999999999 999999987654331
Q ss_pred CCchhHHHHHHhhcccccccccccC------CCccc------ccccccCh-hh--------------------HHHhhcC
Q 020630 171 NMKPSKLHLFMYGLLFGLADTWAAM------PDNKM------VGKAIKDP-EK--------------------LKVIASN 217 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~-~~--------------------~~~~~~~ 217 (323)
. ...+.......-..-+.|... +...+ ....+..+ .. .......
T Consensus 181 ~---~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~ 257 (362)
T d2pl5a1 181 M---QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ 257 (362)
T ss_dssp H---HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred H---HHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHH
Confidence 1 111111110000000011000 00000 00000000 00 1111111
Q ss_pred CcccCCCCCchhHHHHHHhh--------HHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcC--CCCcEEEec-C
Q 020630 218 PRRYTGKPRVGTMREIARVC--------QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS--ADKSIKIYD-G 286 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~-~ 286 (323)
...+........+..+.+.. .++.+.+++|++|+|+|..+.|.++|++..+.+++.+++ .++++++++ .
T Consensus 258 g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~ 337 (362)
T d2pl5a1 258 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSG 337 (362)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 11222222222333333222 224456899999999999999999999999999999842 234666675 4
Q ss_pred CCccccccCCchhHHHHHHHHHHHHH
Q 020630 287 MYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.||..++.+. +++.+.|.+||+
T Consensus 338 ~GHdaFL~e~----~~~~~~I~~FL~ 359 (362)
T d2pl5a1 338 EGHDSFLLKN----PKQIEILKGFLE 359 (362)
T ss_dssp BSSGGGGSCC----HHHHHHHHHHHH
T ss_pred CCcchhccCH----HHHHHHHHHHHc
Confidence 8999987666 458888889885
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.88 E-value=2e-25 Score=176.19 Aligned_cols=253 Identities=14% Similarity=0.101 Sum_probs=134.7
Q ss_pred cEEEEEecCCCCCCceEEEEecCCCCCcchhhH-------HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhh
Q 020630 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-------~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
++.+..+.|.+ ..+++|||+||++.++. .|. .++..++++||+|+++|+||||.|...... .+...+.++
T Consensus 45 ~~~v~~~~p~~-~~~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~-~~~~~~~~~ 121 (318)
T d1qlwa_ 45 QMYVRYQIPQR-AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISA-INAVKLGKA 121 (318)
T ss_dssp CEEEEEEEETT-CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHH-HHHHHTTSS
T ss_pred eEEEEEECCCC-CCCCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcccc-CCHHHHHHH
Confidence 44445555554 34666899999998765 554 367788899999999999999999755322 134444555
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchh-HHHHHHhhccccccccc
Q 020630 114 SLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS-KLHLFMYGLLFGLADTW 192 (323)
Q Consensus 114 ~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 192 (323)
+.+.++.+... ..+..++|||+||.++..++..........+++.++........... .................
T Consensus 122 ~~~~l~~~~~~----~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (318)
T d1qlwa_ 122 PASSLPDLFAA----GHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTV 197 (318)
T ss_dssp CGGGSCCCBCC----CHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHhhc----ccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhcccc
Confidence 55555544332 33677889999999988887765443133333332222211111000 01111111111100000
Q ss_pred ccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchh-----H
Q 020630 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-----S 267 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-----~ 267 (323)
... ........................... ............+++|+|+++|++|..+|... .
T Consensus 198 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~ 265 (318)
T d1qlwa_ 198 LLS-------HSQSGIYPFQTAAMNPKGITAIVSVEP-----GECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKAC 265 (318)
T ss_dssp EEE-------EGGGTTHHHHHHHHCCTTEEEEEEESC-----SCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHH
T ss_pred chh-------hhcccchhhhhhhhhhhHHHHHHhhhc-----ccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHH
Confidence 000 000000000000011100000000000 00000123456678999999999999998643 2
Q ss_pred HHHHHHh--cCCCCcEEEec-----CCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 268 KLLYEKA--SSADKSIKIYD-----GMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 268 ~~~~~~~--~~~~~~~~~~~-----~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+.+ .+.+++++.++ |+||++++|.+ .+++.+.|.+||+++.
T Consensus 266 ~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~---~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 266 HAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRN---NLQVADLILDWIGRNT 317 (318)
T ss_dssp HHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTT---HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCcEEEEecccccCCCcCccccCcC---HHHHHHHHHHHHHhcc
Confidence 3333333 23567888865 67799986554 5779999999999863
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=5.6e-21 Score=140.17 Aligned_cols=178 Identities=16% Similarity=0.115 Sum_probs=126.8
Q ss_pred CCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCC-----CCCCCh---HHHHhhHHHHHHHHHhh
Q 020630 53 KVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIR-----CYLGDM---EKVAASSLSFFKHVRHS 124 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~---~~~~~d~~~~i~~l~~~ 124 (323)
+++|+||++||++++.. .|..+++.|.+ ++.|+.++.+..+...... ....+. ...++.+..+++.....
T Consensus 15 ~~~P~vi~lHG~G~~~~-~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 92 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDEN-QFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 92 (203)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhc
Confidence 45899999999998876 77888888876 5889988766544332111 011122 33345555555544433
Q ss_pred CCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCccccccc
Q 020630 125 EPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
.+ ..+++++|+|+||.+++.++..+|+. +.++++.++.......
T Consensus 93 ~~--~~~v~l~G~S~Gg~~a~~~a~~~p~~-~~~~~~~~~~~~~~~~--------------------------------- 136 (203)
T d2r8ba1 93 YQ--AGPVIGLGFSNGANILANVLIEQPEL-FDAAVLMHPLIPFEPK--------------------------------- 136 (203)
T ss_dssp HT--CCSEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCCCCSCCC---------------------------------
T ss_pred CC--CceEEEEEecCHHHHHHHHHHhhhhc-ccceeeeccccccccc---------------------------------
Confidence 22 56899999999999999999999998 9999999876432110
Q ss_pred ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhc--CCCCcEE
Q 020630 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIK 282 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 282 (323)
........|+++++|++|.++|.+.++++.+.+. +-+++++
T Consensus 137 -------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~ 179 (203)
T d2r8ba1 137 -------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETV 179 (203)
T ss_dssp -------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEE
T ss_pred -------------------------------------cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEE
Confidence 0012235799999999999999999999998874 3346888
Q ss_pred EecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 283 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++ ||.+. . +..+.+.+||.++
T Consensus 180 ~~~g-gH~~~----~----~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 180 WHPG-GHEIR----S----GEIDAVRGFLAAY 202 (203)
T ss_dssp EESS-CSSCC----H----HHHHHHHHHHGGG
T ss_pred EECC-CCcCC----H----HHHHHHHHHHHhc
Confidence 9986 89866 2 2457788998753
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.87 E-value=1.2e-20 Score=142.81 Aligned_cols=196 Identities=15% Similarity=0.085 Sum_probs=137.0
Q ss_pred EEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc--chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHH
Q 020630 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT--GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
.+...++ .-...+|.|.+ .+.|+||++||++... ...+..++..|+++||.|+++|+|..+.. ++.+.
T Consensus 41 dv~Yg~~~~~~lDiy~P~~-~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~--------~~p~~ 111 (261)
T d2pbla1 41 NLSYGEGDRHKFDLFLPEG-TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV--------RISEI 111 (261)
T ss_dssp EEESSSSTTCEEEEECCSS-SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS--------CHHHH
T ss_pred CcCCCCCcCeEEEEeccCC-CCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccc--------cCchh
Confidence 4444455 66777888876 6789999999976321 22566788899999999999999965432 67888
Q ss_pred HhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcC------CCCeeEEEEccCccCCCCCCchhHHHHHHhhc
Q 020630 111 AASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSE------PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 111 ~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+|+.+.++++..+. +.+++|+|||.||+++..++.... .. +++++.+++..........
T Consensus 112 ~~d~~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------- 177 (261)
T d2pbla1 112 TQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGAR-IRNVVPISPLSDLRPLLRT---------- 177 (261)
T ss_dssp HHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTT-EEEEEEESCCCCCGGGGGS----------
T ss_pred HHHHHHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhc-hhhhhccccccccchhhhh----------
Confidence 999999999998875 458999999999999988775532 23 8899988877654311000
Q ss_pred ccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCc
Q 020630 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
.....+ ..+.. ...... ......+..+|+++++|++|..++.
T Consensus 178 -----------~~~~~~---~~~~~--~~~~~S----------------------P~~~~~~~~~P~li~~G~~D~~~~~ 219 (261)
T d2pbla1 178 -----------SMNEKF---KMDAD--AAIAES----------------------PVEMQNRYDAKVTVWVGGAERPAFL 219 (261)
T ss_dssp -----------TTHHHH---CCCHH--HHHHTC----------------------GGGCCCCCSCEEEEEEETTSCHHHH
T ss_pred -----------hhcccc---cCCHH--HHHHhC----------------------chhhcccCCCeEEEEEecCCCchHH
Confidence 000000 00000 000000 1123455689999999999998888
Q ss_pred hhHHHHHHHhcCCCCcEEEecCCCccccc
Q 020630 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
+.++.+.+.+ +++.+++++.+|+..+
T Consensus 220 ~qs~~~~~~l---~~~~~~~~~~~HF~vi 245 (261)
T d2pbla1 220 DQAIWLVEAW---DADHVIAFEKHHFNVI 245 (261)
T ss_dssp HHHHHHHHHH---TCEEEEETTCCTTTTT
T ss_pred HHHHHHHHHh---CCCceEeCCCCchhHH
Confidence 8899999988 3678899999997654
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.86 E-value=3.7e-20 Score=148.30 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=109.1
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc------c----hhhHHHHHHHhcCCcEEEEeccccCcCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT------G----WMFQKICISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~------~----~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
+++.++..|| +|.+.+|.|.+.++-|+||+.|+++... . ..+....+.|+++||.|+.+|.||+|.|.+
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 5678999999 9999999998877789999999876321 1 011234577899999999999999999986
Q ss_pred CCCCCC--------ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 100 IRCYLG--------DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 100 ~~~~~~--------~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
...... ...+.++|+.++++++..+..++..+|.++|+|+||.+++.+|...|+. ++++|..++..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~-l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 105 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA-LKVAVPESPMIDG 180 (381)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT-EEEEEEESCCCCT
T ss_pred ceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccc-cceeeeecccccc
Confidence 532110 1223568999999999888666678999999999999999999998888 9999998887664
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.85 E-value=9.5e-20 Score=134.86 Aligned_cols=188 Identities=19% Similarity=0.187 Sum_probs=121.2
Q ss_pred cCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcC--CcEEEEecccc--------CcC-CC-----CCCCCCCC---hH
Q 020630 48 LPLDQKVKATVYMTHGYGSDTGWMFQKICISYATW--GYAVFAADLLG--------HGR-SD-----GIRCYLGD---ME 108 (323)
Q Consensus 48 ~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G--------~G~-s~-----~~~~~~~~---~~ 108 (323)
.|.+ +++++||++||+|++.. .+..+++.|... ++.+++++-|. .+. +. .......+ .+
T Consensus 8 ~p~~-~~~~~Vi~lHG~G~~~~-~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 85 (218)
T d1auoa_ 8 QPAK-PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE 85 (218)
T ss_dssp CCSS-CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred CCCC-CCCeEEEEEcCCCCChh-hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHH
Confidence 3443 56789999999998876 777788887654 45666665431 110 00 00111112 22
Q ss_pred HHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhc-CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccc
Q 020630 109 KVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 109 ~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...+.+.++++.. .+..++..+++++|+|+||.+++.++..+ +.. +.+++.+++.........
T Consensus 86 ~~~~~v~~li~~~-~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~-~~~~v~~~g~~~~~~~~~-------------- 149 (218)
T d1auoa_ 86 VSAKMVTDLIEAQ-KRTGIDASRIFLAGFSQGGAVVFHTAFINWQGP-LGGVIALSTYAPTFGDEL-------------- 149 (218)
T ss_dssp HHHHHHHHHHHHH-HHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSC-CCEEEEESCCCTTCCTTC--------------
T ss_pred HHHHHHHHHHHHH-HHhCCCCcceEEeeeCcchHHHHHHHHhccccc-ceeeeeccccCccccccc--------------
Confidence 2233344455443 23445577999999999999999887654 445 899999886532110000
Q ss_pred cccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
. ......+.|+++++|++|.++|.+.+
T Consensus 150 ------------------~-----------------------------------~~~~~~~~pvl~~hG~~D~vvp~~~~ 176 (218)
T d1auoa_ 150 ------------------E-----------------------------------LSASQQRIPALCLHGQYDDVVQNAMG 176 (218)
T ss_dssp ------------------C-----------------------------------CCHHHHTCCEEEEEETTCSSSCHHHH
T ss_pred ------------------c-----------------------------------cchhccCCCEEEEecCCCCccCHHHH
Confidence 0 00011257999999999999999999
Q ss_pred HHHHHHhcC--CCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHH
Q 020630 268 KLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++.+.+.. .+++++.++ +||... .+..+.+.+||.+++
T Consensus 177 ~~~~~~L~~~g~~~~~~~~~-~gH~i~--------~~~~~~i~~wl~~~l 217 (218)
T d1auoa_ 177 RSAFEHLKSRGVTVTWQEYP-MGHEVL--------PQEIHDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHTTTCCEEEEEES-CSSSCC--------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEC-CCCccC--------HHHHHHHHHHHHHhc
Confidence 999888843 356888887 689776 235678999998876
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=2.8e-19 Score=136.64 Aligned_cols=196 Identities=11% Similarity=0.076 Sum_probs=116.9
Q ss_pred CCceEEEEecCCCC----CcchhhH----HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhh
Q 020630 53 KVKATVYMTHGYGS----DTGWMFQ----KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS 124 (323)
Q Consensus 53 ~~~~~vv~~hG~~~----~~~~~~~----~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~ 124 (323)
+++|+||++||+|. .....+. .+++.+.+.||.|+++|+|..+.. .+....+|+.+.++++...
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~--------~~~~~~~d~~~~~~~l~~~ 100 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAVSNITRLVKE 100 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcch--------hhhHHHHhhhhhhhccccc
Confidence 56899999999652 1122333 345566678999999999975543 3445567777777777666
Q ss_pred CCCCCCCEEEEEechhHHHHHHHHhhcCCCC----------------eeEEEEccCccCCCCCCchhHHHHHHhhccccc
Q 020630 125 EPYRDLPAFLFGESMGGAATMLMYFQSEPNT----------------WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~----------------v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.. ..+++|+|||+||.+++.++...++.. +...+...+.....
T Consensus 101 ~~--~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 159 (263)
T d1vkha_ 101 KG--LTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLK------------------- 159 (263)
T ss_dssp HT--CCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHH-------------------
T ss_pred cc--ccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccch-------------------
Confidence 54 568999999999999999988765430 12222221111000
Q ss_pred ccccccCCCccccccc-ccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhH
Q 020630 189 ADTWAAMPDNKMVGKA-IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
...... .........+......... ... .........+.++.+|+++++|++|.++|.+.+
T Consensus 160 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s 221 (263)
T d1vkha_ 160 ----------ELLIEYPEYDCFTRLAFPDGIQMYEE----EPS----RVMPYVKKALSRFSIDMHLVHSYSDELLTLRQT 221 (263)
T ss_dssp ----------HHHHHCGGGHHHHHHHCTTCGGGCCC----CHH----HHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHH
T ss_pred ----------hhhhhccccchhhhcccccccccccc----ccc----ccCccccccccccCCCeeeeecCCCcccCHHHH
Confidence 000000 0000000111111110000 000 000111233445689999999999999999999
Q ss_pred HHHHHHhc--CCCCcEEEecCCCccccccC
Q 020630 268 KLLYEKAS--SADKSIKIYDGMYHSLIQGE 295 (323)
Q Consensus 268 ~~~~~~~~--~~~~~~~~~~~~gH~~~~~~ 295 (323)
..+.+.+. +.+++++++++++|...+++
T Consensus 222 ~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~ 251 (263)
T d1vkha_ 222 NCLISCLQDYQLSFKLYLDDLGLHNDVYKN 251 (263)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCSGGGGGGC
T ss_pred HHHHHHHHHCCCCEEEEEECCCCchhhhcC
Confidence 99998874 34578999999999877544
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.84 E-value=8.7e-19 Score=137.44 Aligned_cols=255 Identities=10% Similarity=0.015 Sum_probs=141.2
Q ss_pred CCccceeEEecCCC--cEEEEEecCCC-CCCceEEEEecCCCC---CcchhhHHHHHHHhc-CCcEEEEeccccCcCCCC
Q 020630 27 GVRNGKEYFETPNG--KLFTQSFLPLD-QKVKATVYMTHGYGS---DTGWMFQKICISYAT-WGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 27 ~~~~~~~~~~~~~g--~l~~~~~~~~~-~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~ 99 (323)
++..++..+...+| +|..++|.|.+ .++.|+||++||.|. +.. .+..++..++. .||.|+.+|+|...+.
T Consensus 47 ~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~-~~~~~~~~la~~~G~~V~~vdYrl~pe~-- 123 (317)
T d1lzla_ 47 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPET-- 123 (317)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTS--
T ss_pred CceEEEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCccccccccc-ccchHHHhHHhhcCCccccccccccccc--
Confidence 45556777888888 69999999875 346789999999763 334 45556666654 5999999999976543
Q ss_pred CCCCCCChHHHHhhHHHHHHHHHh---hCCCCCCCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccCCCCCCc
Q 020630 100 IRCYLGDMEKVAASSLSFFKHVRH---SEPYRDLPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~i~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~~~~~~~ 173 (323)
.+....+|+.+.+.++.. +.+++..+|+++|+|.||++++.++...++ ......++..+.........
T Consensus 124 ------~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (317)
T d1lzla_ 124 ------TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV 197 (317)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH
T ss_pred ------cccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccccccccccc
Confidence 233444555555555433 233445689999999999999988865321 11333344333322111110
Q ss_pred hhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEE
Q 020630 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
.. . ... ........................... ....... ............|+++
T Consensus 198 s~---~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~pp~li 253 (317)
T d1lzla_ 198 SM---T---NFV-----------DTPLWHRPNAILSWKYYLGESYSGPED-PDVSIYA------APSRATDLTGLPPTYL 253 (317)
T ss_dssp HH---H---HCS-----------SCSSCCHHHHHHHHHHHHCTTCCCTTC-SCCCTTT------CGGGCSCCTTCCCEEE
T ss_pred cc---c---ccc-----------ccchhhhhhhHHHHhhhccccccCCCC-chhcccc------CchhhhhccCCCCeEE
Confidence 00 0 000 000000000000000000000000000 0000000 0000001122479999
Q ss_pred EeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHh
Q 020630 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|+.|.+ ...++.+.+.+. +..++++++++++|.+.+.......++..+.+.+||.+.++
T Consensus 254 ~~g~~D~l--~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 254 STMELDPL--RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp EEETTCTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred EECCCCCC--HHHHHHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 99999965 456777777763 34578999999999876544445556667788899988764
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.83 E-value=5.2e-20 Score=146.38 Aligned_cols=133 Identities=15% Similarity=0.076 Sum_probs=104.8
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcch---hhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW---MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~---~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~ 106 (323)
+.+.|+..|| +|.+.+|.|.+.++-|+||+.||++..... .+....+.|+++||.|+++|.||+|.|.+.......
T Consensus 6 ~~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~ 85 (347)
T d1ju3a2 6 SNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVD 85 (347)
T ss_dssp EEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTT
T ss_pred eCeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccc
Confidence 4568899999 999999999886777999999998754221 222345678899999999999999999986644322
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
. ..|..++++++..+.. .+.+|.++|+|+||.+++.+|...|.. +++++...+..+.
T Consensus 86 ~---~~d~~d~i~w~~~q~~-~~grVg~~G~SygG~~~~~~A~~~~~~-l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 86 D---EADAEDTLSWILEQAW-CDGNVGMFGVSYLGVTQWQAAVSGVGG-LKAIAPSMASADL 142 (347)
T ss_dssp H---HHHHHHHHHHHHHSTT-EEEEEEECEETHHHHHHHHHHTTCCTT-EEEBCEESCCSCT
T ss_pred h---hhhHHHHHHHHHhhcc-CCcceEeeeccccccchhhhhhccccc-ceeeeeccccchh
Confidence 2 3566777777776543 346999999999999999999998887 9999988887654
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=4.8e-21 Score=125.19 Aligned_cols=99 Identities=19% Similarity=0.166 Sum_probs=81.2
Q ss_pred eEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHH
Q 020630 33 EYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
.-+...+| +|+|...+. +|+|||+||.+. .| .+.|. ++|+|+++|+||||.|+.++ ++.++++
T Consensus 3 ~~~~~~~G~~l~y~~~G~-----G~pvlllHG~~~----~w---~~~L~-~~yrvi~~DlpG~G~S~~p~---~s~~~~a 66 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVGK-----GPPVLLVAEEAS----RW---PEALP-EGYAFYLLDLPGYGRTEGPR---MAPEELA 66 (122)
T ss_dssp EEEEEETTEEEEEEEECC-----SSEEEEESSSGG----GC---CSCCC-TTSEEEEECCTTSTTCCCCC---CCHHHHH
T ss_pred ceEEEECCEEEEEEEEcC-----CCcEEEEecccc----cc---ccccc-CCeEEEEEeccccCCCCCcc---cccchhH
Confidence 44566788 999999984 679999999542 23 23454 47999999999999998643 4899999
Q ss_pred hhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC
Q 020630 112 ASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 112 ~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
+++.++++.+... +.+++||||||.+++.+++..+.
T Consensus 67 ~~i~~ll~~L~i~------~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 67 HFVAGFAVMMNLG------APWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHTTCC------SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC------CcEEEEeCccHHHHHHHHhhccc
Confidence 9999999999866 78999999999999999987544
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.83 E-value=1.6e-19 Score=143.46 Aligned_cols=260 Identities=15% Similarity=0.156 Sum_probs=153.3
Q ss_pred CCccceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCC---c-chhhHHHHHHHhcCCcEEEEeccccCcCCCCC
Q 020630 27 GVRNGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSD---T-GWMFQKICISYATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~---~-~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~ 100 (323)
++..++..+++.|| .|..++|.|.+ .++.|+||++||.|.. . ...+..++..|+++|+.|+++|||..+.....
T Consensus 76 ~v~~~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe 155 (358)
T d1jkma_ 76 DVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH 155 (358)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred CccEEEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccccc
Confidence 34556677888999 99999999876 3456899999998642 2 22456788889999999999999986443211
Q ss_pred CCCCCChHHHHhhHHHHHHHHHhhC-CCCCCCEEEEEechhHHHHHHHHhh-----cCCCCeeEEEEccCccCCCCCCch
Q 020630 101 RCYLGDMEKVAASSLSFFKHVRHSE-PYRDLPAFLFGESMGGAATMLMYFQ-----SEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~~v~~~il~~~~~~~~~~~~~ 174 (323)
. .+....+|+.+.++++.... ..+..+++|+|+|.||.+++.++.. .... +.++++..|..........
T Consensus 156 ~----~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~ 230 (358)
T d1jkma_ 156 H----PFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDA-IDGVYASIPYISGGYAWDH 230 (358)
T ss_dssp C----CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGG-CSEEEEESCCCCCCTTSCH
T ss_pred C----CCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCcc-ccccccccceeccccCccc
Confidence 1 34556778888777775431 1225689999999999999877654 1233 7889998887765433322
Q ss_pred hHHHHHHhhcccccccccccCCCcccccccccChhhH---HHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccE
Q 020630 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
............... . . ....... ..+......... +...... .. ...++. -.|+
T Consensus 231 ~~~~~~~~~~~~~~~----~-----~----~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~----a~---~~~~~~-lPp~ 288 (358)
T d1jkma_ 231 ERRLTELPSLVENDG----Y-----F----IENGGMALLVRAYDPTGEHAED-PIAWPYF----AS---EDELRG-LPPF 288 (358)
T ss_dssp HHHHHHCTHHHHTTT----S-----S----SCHHHHHHHHHHHSSSSTTTTC-TTTCGGG----CC---HHHHTT-CCCE
T ss_pred hhhcccccchhcccc----c-----c----cchhhhhhHHhhcCCccCCccC-ccccccc----cc---hhhccC-CCCE
Confidence 221111100000000 0 0 0000000 000000000000 0000000 00 000111 2499
Q ss_pred EEEeeCCCcccCchhHHHHHHHhc--CCCCcEEEecCCCccccc---cCCchhHHHHHHHHHHHHHHHH
Q 020630 252 LTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQ---GEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++|+.|.+. ..++.+++++. +..+++++++|.+|.+.. ....+..++..+.|..|+.++.
T Consensus 289 li~~g~~D~l~--~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 289 VVAVNELDPLR--DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp EEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCH--HHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999765 45666777663 345789999999997532 1123456778889999998765
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.81 E-value=1.2e-18 Score=131.70 Aligned_cols=209 Identities=16% Similarity=0.130 Sum_probs=129.2
Q ss_pred CceEEEEecCC--CCCcchhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 54 VKATVYMTHGY--GSDTGWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 54 ~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
.+|+++|+||+ +++.. .|..+++.|... +.|+++|+||+|.+.... .+++++++++.+.|..... ..+
T Consensus 41 ~~~~l~c~~~~~~gg~~~-~y~~La~~L~~~-~~V~al~~pG~~~~e~~~---~s~~~~a~~~~~~i~~~~~-----~~P 110 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPH-EFTRLAGALRGI-APVRAVPQPGYEEGEPLP---SSMAAVAAVQADAVIRTQG-----DKP 110 (255)
T ss_dssp CSSEEEEECCCSSSCSGG-GGHHHHHHHTTT-CCEEEECCTTSSTTCCEE---SSHHHHHHHHHHHHHHTTS-----SSC
T ss_pred CCCeEEEECCCCCCCCHH-HHHHHHHhcCCC-ceEEEEeCCCcCCCCCCC---CCHHHHHHHHHHHHHHhCC-----CCC
Confidence 47899999984 34444 899999999875 999999999999875433 3789999888777755432 348
Q ss_pred EEEEEechhHHHHHHHHhhc---CCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccCh
Q 020630 132 AFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
++|+||||||.+|+.+|.+. ... |.+++++++...... .................. .. ...+.
T Consensus 111 ~~L~GhS~Gg~vA~e~A~~l~~~g~~-v~~lvlld~~~p~~~----~~~~~~~~~~~~~~~~~~----~~-----~~~~~ 176 (255)
T d1mo2a_ 111 FVVAGHSAGALMAYALATELLDRGHP-PRGVVLIDVYPPGHQ----DAMNAWLEELTATLFDRE----TV-----RMDDT 176 (255)
T ss_dssp EEEEECSTTHHHHHHHHHHHHHHTCC-CSEEEEEECSCSSHH----HHHHHHHHHHHTTCC--------C-----CCCHH
T ss_pred EEEEEeCCcHHHHHHHHHhhHhcCCC-ccEEEEECCCCCCCc----cchhhHHHHHHHHhhccc----cc-----cCCHH
Confidence 99999999999999999764 445 899999987543211 100000000000000000 00 00000
Q ss_pred hhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHHHHhcCCCCcEEEecCCC
Q 020630 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
. ...+....+... .-....+.+|++++.+++|....... .+.... ....+++.+++ +
T Consensus 177 ~-----------------l~a~~~~~~~~~--~~~~~~~~~p~l~v~a~~~~~~~~~~--~w~~~~-~~~~~~~~v~G-~ 233 (255)
T d1mo2a_ 177 R-----------------LTALGAYDRLTG--QWRPRETGLPTLLVSAGEPMGPWPDD--SWKPTW-PFEHDTVAVPG-D 233 (255)
T ss_dssp H-----------------HHHHHHHHHHHH--HCCCCCCCCCEEEEECCSSSSCCTTC--CCCCCC-CSSCEEEECCS-C
T ss_pred H-----------------HHHHHHHHHHHh--cCCCccccceEEEeecCCCCCcchhh--HHHHhC-CCCcEEEEECC-C
Confidence 0 001111111111 12245679999999998875543322 222222 24578888986 8
Q ss_pred ccccccCCchhHHHHHHHHHHHHH
Q 020630 289 HSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|+.+++ +..+.+.+.|.+||.
T Consensus 234 H~~ml~---~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 234 HFTMVQ---EHADAIARHIDAWLG 254 (255)
T ss_dssp CSSCSS---CCHHHHHHHHHHHHT
T ss_pred Cccccc---ccHHHHHHHHHHHhC
Confidence 997654 346889999999984
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.80 E-value=5.7e-19 Score=135.32 Aligned_cols=114 Identities=13% Similarity=0.019 Sum_probs=87.8
Q ss_pred EEEEEecCCCCCCceEEEEecCCCCCcc-hhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHH
Q 020630 42 LFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~ 120 (323)
+......|. ..+++|||+||++.+.. +.|..+++.|.+.||.|+.+|++|+|.+ +.+..++++.+.|+.
T Consensus 20 ~~~~~~~p~--~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~--------d~~~sae~la~~i~~ 89 (317)
T d1tcaa_ 20 LTCQGASPS--SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN--------DTQVNTEYMVNAITA 89 (317)
T ss_dssp EEETTBCTT--SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCS--------CHHHHHHHHHHHHHH
T ss_pred cccccCCCC--CCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCC--------chHhHHHHHHHHHHH
Confidence 333333443 33567899999987743 2466789999999999999999999876 456666777777777
Q ss_pred HHhhCCCCCCCEEEEEechhHHHHHHHHhhcCC--CCeeEEEEccCccC
Q 020630 121 VRHSEPYRDLPAFLFGESMGGAATMLMYFQSEP--NTWTGLIFSAPLFV 167 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~v~~~il~~~~~~ 167 (323)
+....+ ..++.||||||||.++..++..+|+ ..|+.+|.+++...
T Consensus 90 v~~~~g--~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 90 LYAGSG--NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHTT--SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHhcc--CCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 766654 5689999999999999999998874 23999999998754
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.80 E-value=1.2e-19 Score=146.55 Aligned_cols=254 Identities=14% Similarity=0.088 Sum_probs=153.0
Q ss_pred CC-c--EEEEEecCCCCCCceEEEEecCCCCCc-----------------------------------------------
Q 020630 39 NG-K--LFTQSFLPLDQKVKATVYMTHGYGSDT----------------------------------------------- 68 (323)
Q Consensus 39 ~g-~--l~~~~~~~~~~~~~~~vv~~hG~~~~~----------------------------------------------- 68 (323)
|| + |+..++.|.+.++-|+|+..+.++...
T Consensus 37 DG~~d~l~~di~rP~~~~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (405)
T d1lnsa3 37 RGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKA 116 (405)
T ss_dssp SSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEESSC
T ss_pred CCCEeEEEEEEEccCCCCCceEEEEeCCcCCCCccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88 4 999999998755557888777764210
Q ss_pred ------chhhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhh--------------CCCC
Q 020630 69 ------GWMFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS--------------EPYR 128 (323)
Q Consensus 69 ------~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~--------------~~~~ 128 (323)
.|. ....+.|+++||.|+.+|.||.|.|.+.... .+.+ ..+|..++|+++..+ .+..
T Consensus 117 ~~~~~~~~~-~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~-~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~Ws 193 (405)
T d1lnsa3 117 PYRFTHGWT-YSLNDYFLTRGFASIYVAGVGTRSSDGFQTS-GDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWA 193 (405)
T ss_dssp SCBCCCCCC-CHHHHHHHTTTCEEEEECCTTSTTSCSCCCT-TSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTE
T ss_pred ccccccccc-ccchHHHHhCCCEEEEECCCCCCCCCCcccc-CChh-hhhhHHHHHHHHHhccccccccccccccccccc
Confidence 011 1244678999999999999999999986543 2344 478999999999753 2234
Q ss_pred CCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccc----c
Q 020630 129 DLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK----A 204 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 204 (323)
+.+|.++|+|+||.+++.+|...|.. ++++|..++..+..... ...-.................. .
T Consensus 194 nGkVGm~G~SY~G~~q~~aA~~~pp~-LkAivp~~~~~d~y~~~---------~~~G~~~~~~~~~~~~~~~~~~~~~~~ 263 (405)
T d1lnsa3 194 NGKVAMTGKSYLGTMAYGAATTGVEG-LELILAEAGISSWYNYY---------RENGLVRSPGGFPGEDLDVLAALTYSR 263 (405)
T ss_dssp EEEEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBHHHHH---------BSSSSBCCCTTCTTCCHHHHHHHHCGG
T ss_pred CCeeEEEecCHHHHHHHHHHhcCCcc-ceEEEecCccccHHHHh---------hcCCccccccchhhhhhhhhhcccccc
Confidence 56899999999999999999998887 99999988776531100 0000000000000000000000 0
Q ss_pred ccChh------------hHH-HhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCCcccCchhHHHHH
Q 020630 205 IKDPE------------KLK-VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 205 ~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
..... ... ....... ..... .+... ......+.+|++|+|+++|..|..+++..+..++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~d---~~w~~-~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y 335 (405)
T d1lnsa3 264 NLDGADFLKGNAEYEKRLAEMTAALDRK----SGDYN---QFWHD-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFW 335 (405)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHCTT----TCCCC---HHHHT-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHH
T ss_pred ccccchhhhchhhhhhccchhhhhhhhc----cccch---hhhhh-cChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHH
Confidence 00000 000 0000000 00000 00000 0123456789999999999999999998888888
Q ss_pred HHhcCC-CCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhh
Q 020630 272 EKASSA-DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 272 ~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.+... ..++++-+ .+|......+ ...+.+.+.+||+..++.
T Consensus 336 ~al~~~~~~~Lilgp-w~H~~~~~~~---~~d~~~~~~~wFD~~LkG 378 (405)
T d1lnsa3 336 KALPEGHAKHAFLHR-GAHIYMNSWQ---SIDFSETINAYFVAKLLD 378 (405)
T ss_dssp HHSCTTCCEEEEEES-CSSCCCTTBS---SCCHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCcEEEEeC-CCCCCCcccc---cchHHHHHHHHHHHHhCC
Confidence 887432 34565556 5897642211 123567788899999864
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=3.7e-18 Score=131.55 Aligned_cols=253 Identities=11% Similarity=0.023 Sum_probs=147.5
Q ss_pred ccceeEEecCCC-cEEEEEecCCC---CCCceEEEEecCCCCCcc-h-hhHHHHHHHhcCCcEEEEeccccCcCCCCC--
Q 020630 29 RNGKEYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-MFQKICISYATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-- 100 (323)
..+++.+++.|| +|.+.++.|++ +++.|+||++||.++... . ........+...++.+...+.++.......
T Consensus 6 ~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T d1qfma2 6 QTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWH 85 (280)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHH
T ss_pred EEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhh
Confidence 347788999999 99999999875 345699999999754321 1 222333344455677777776655432210
Q ss_pred -CCCCCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 101 -RCYLGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 101 -~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
...........++...................+++|.|.||..+...+...++. +++++...+............
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--- 161 (280)
T d1qfma2 86 KGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDL-FGCVIAQVGVMDMLKFHKYTI--- 161 (280)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGSTT---
T ss_pred hcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccch-hhheeeeccccchhhhccccc---
Confidence 111112334445555555555555555567889999999999999999998887 777777776654321110000
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHH-hhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV-IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
..... .............. ....+..... ..........|+|+++|++
T Consensus 162 ---------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~s----------------~~~~~~~~~pP~LiihG~~ 210 (280)
T d1qfma2 162 ---------GHAWT------TDYGCSDSKQHFEWLIKYSPLHNVK----------------LPEADDIQYPSMLLLTADH 210 (280)
T ss_dssp ---------GGGGH------HHHCCTTSHHHHHHHHHHCGGGCCC----------------CCSSTTCCCCEEEEEEETT
T ss_pred ---------cccce------ecccCCCcccccccccccccccccc----------------hhhhcccCCCceEEeeccc
Confidence 00000 00000000000000 0000000000 0011122234899999999
Q ss_pred CcccCchhHHHHHHHhc---------CCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHHHhhc
Q 020630 259 DGVTCPTSSKLLYEKAS---------SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERC 318 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
|..||...++++.+.+. +..+++++++++||.+. .+.....+....+.+||+++++..
T Consensus 211 D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~--~~~~~~~~~~~~~~~fl~k~L~~~ 277 (280)
T d1qfma2 211 DDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAG--KPTAKVIEEVSDMFAFIARCLNID 277 (280)
T ss_dssp CCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTT--CCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCC--CcHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999998872 33468999999999865 122222344557889999998753
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.78 E-value=2.8e-19 Score=139.64 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=87.6
Q ss_pred CCceEEEEecCCCCCcch-----hhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCC
Q 020630 53 KVKATVYMTHGYGSDTGW-----MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~-----~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 127 (323)
+++.+|||+||++++... .|..+.+.|.++||+|+++|+||+|.|+.... ..+++++++.++++.+..
T Consensus 6 ~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~---~~~~l~~~i~~~~~~~~~---- 78 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG---RGEQLLAYVKQVLAATGA---- 78 (319)
T ss_dssp CCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS---HHHHHHHHHHHHHHHHCC----
T ss_pred CCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---cHHHHHHHHHHHHHHhCC----
Confidence 346678999999876431 37788999999999999999999998875432 577888888888887753
Q ss_pred CCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 128 RDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
++++++||||||.++..++.++|++ |+++|+++++..
T Consensus 79 --~~v~lvGhS~GG~~~~~~~~~~p~~-v~~vv~i~~p~~ 115 (319)
T d1cvla_ 79 --TKVNLIGHSQGGLTSRYVAAVAPQL-VASVTTIGTPHR 115 (319)
T ss_dssp --SCEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESCCTT
T ss_pred --CCEEEEeccccHHHHHHHHHHCccc-cceEEEECCCCC
Confidence 4899999999999999999999999 999999987543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.78 E-value=2.8e-17 Score=128.11 Aligned_cols=240 Identities=14% Similarity=0.095 Sum_probs=137.9
Q ss_pred cceeEEecCCCcEEEEEecCCCCCCceEEEEecCCCC---CcchhhHHHHHHHhc-CCcEEEEeccccCcCCCCCCCCCC
Q 020630 30 NGKEYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS---DTGWMFQKICISYAT-WGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
.++..+...+|.|..+.|.|.+ +.|+||++||+|. +.. .+..++..+++ .|+.|+++|+|...+.
T Consensus 56 ~~~~~i~~~~g~i~~~iy~P~~--~~P~il~iHGGg~~~g~~~-~~~~~~~~l~~~~g~~Vv~v~Yrlap~~-------- 124 (311)
T d1jjia_ 56 VEDRTIKGRNGDIRVRVYQQKP--DSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEH-------- 124 (311)
T ss_dssp EEEEEEEETTEEEEEEEEESSS--SEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTS--------
T ss_pred EEEEEEeCCCCcEEEEEEcCCC--CceEEEEEcCCCCccCChh-hhhhhhhhhhhcCCcEEEEecccccccc--------
Confidence 3456677777788889999864 4699999999863 333 45556666654 5999999999964332
Q ss_pred ChHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh----cCCCCeeEEEEccCccCCCCCCchhHHH
Q 020630 106 DMEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ----SEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~il~~~~~~~~~~~~~~~~~ 178 (323)
.+....+|+...++++... ..++..+++++|+|.||.+++.++.. .... +.+.+++.|............
T Consensus 125 ~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~-~~~~~l~~p~~~~~~~~~~~~-- 201 (311)
T d1jjia_ 125 KFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDF-IKHQILIYPVVNFVAPTPSLL-- 201 (311)
T ss_dssp CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCC-EEEEEEESCCCCSSSCCHHHH--
T ss_pred ccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccc-cceeeeecceeeeccCccccc--
Confidence 3344455666665555443 22345689999999999988877644 2223 788889998876543321111
Q ss_pred HHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCC
Q 020630 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.... ... ....... .................. . ...... .+...|+++++|+.
T Consensus 202 -~~~~-------~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~-~----------sp~~~~-~~~~pP~li~~g~~ 254 (311)
T d1jjia_ 202 -EFGE-------GLW-ILDQKIM------SWFSEQYFSREEDKFNPL-A----------SVIFAD-LENLPPALIITAEY 254 (311)
T ss_dssp -HTSS-------SCS-SCCHHHH------HHHHHHHCSSGGGGGCTT-T----------SGGGSC-CTTCCCEEEEEEEE
T ss_pred -cccc-------ccc-cccHHHh------hhhhhhcccccccccccc-c----------chhhcc-cccCCCEEEEEcCC
Confidence 0000 000 0000000 000000000000000000 0 000011 12246999999999
Q ss_pred CcccCchhHHHHHHHhc--CCCCcEEEecCCCccccccCC-chhHHHHHHHHHHHHH
Q 020630 259 DGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~ 312 (323)
|.+++ .+..+.+++. +..+++++++|.+|.+....+ ....++..+.|.+||.
T Consensus 255 D~l~d--~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl~ 309 (311)
T d1jjia_ 255 DPLRD--EGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp CTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred CCChH--HHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHhC
Confidence 97654 5566777763 356789999999997653332 2345667788888873
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.77 E-value=7.1e-18 Score=135.36 Aligned_cols=137 Identities=14% Similarity=0.154 Sum_probs=106.9
Q ss_pred ceeEEecCCC-cEEEEEecCCCCCCceEEEEecCCCCCc-----------chhhHHHHHHHhcCCcEEEEeccccCcCCC
Q 020630 31 GKEYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-----------GWMFQKICISYATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~-----------~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~ 98 (323)
+++.|+..|| +|.+.+|.|.+.++-|+||+.|+++... ........+.|+++||.|+.+|.||+|.|.
T Consensus 29 ~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~ 108 (385)
T d2b9va2 29 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 108 (385)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred eEEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCC
Confidence 4678999999 9999999998877789999988875210 001223456789999999999999999998
Q ss_pred CCCCCCC--------ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 99 GIRCYLG--------DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 99 ~~~~~~~--------~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
+...... .-...++|..++|+++..+.+++..+|.++|+|+||.+++.+|...++. +++++..++..+.
T Consensus 109 G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~-l~a~~~~~~~~d~ 185 (385)
T d2b9va2 109 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPA-LKVAAPESPMVDG 185 (385)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTT-EEEEEEEEECCCT
T ss_pred CceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCc-ceEEEEecccccc
Confidence 6532210 0112468999999999887666678999999999999999999988887 9999987766553
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.75 E-value=1.9e-16 Score=123.44 Aligned_cols=245 Identities=12% Similarity=0.073 Sum_probs=140.2
Q ss_pred eeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCC---CcchhhHHHHHHHhcC-CcEEEEeccccCcCCCCCCCCCC
Q 020630 32 KEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGS---DTGWMFQKICISYATW-GYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~ 105 (323)
...+.. +| +|..++|.|++ .++.|+||++||.+. +.. .+..++..++.+ |+.|+.+|+|.....
T Consensus 48 ~~~~~~-~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~a~~~~~~v~~v~Yrl~p~~-------- 117 (308)
T d1u4na_ 48 EFDMDL-PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEH-------- 117 (308)
T ss_dssp EEEEEE-TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTS--------
T ss_pred EEEEec-CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccc-cccchhhhhhhccccccccccccccccc--------
Confidence 444444 67 89999999875 356799999999763 333 556666777666 467888999854432
Q ss_pred ChHHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhcCC---CCeeEEEEccCccCCCCCCchhHHHH
Q 020630 106 DMEKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
.+....+|+...++++.... .++..+++++|+|.||.+++.++....+ ..+.+..++.+...............
T Consensus 118 ~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (308)
T d1u4na_ 118 KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEE 197 (308)
T ss_dssp CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHHH
T ss_pred ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhhh
Confidence 34555677777777776543 3445689999999999999888765321 11566777776655433222111000
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
. .. ............................... ..... .-..|+++++|+.|
T Consensus 198 ~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-----------~~~d~-~~~Pp~li~~g~~D 250 (308)
T d1u4na_ 198 N-AE--------------GYLLTGGMSLWFLDQYLNSLEELTHPWFSPV-----------LYPDL-SGLPPAYIATAQYD 250 (308)
T ss_dssp T-SS--------------SSSSCHHHHHHHHHHHCSSGGGGGCTTTCGG-----------GCSCC-TTCCCEEEEEEEEC
T ss_pred c-cc--------------cccccchhhhhhhhcccCccccccchhhhhh-----------hchhh-cCCCCeeEEecCcC
Confidence 0 00 0000000000000000000000000000000 00001 11248999999999
Q ss_pred cccCchhHHHHHHHhc--CCCCcEEEecCCCccccccC-CchhHHHHHHHHHHHHHHHH
Q 020630 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWIDERV 315 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~ 315 (323)
.++ ..++.+.+++. +..+++++++|.+|.+.... .....++..+.+.+||++.+
T Consensus 251 ~l~--~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 251 PLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp TTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred Cch--HHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 765 45667777773 34679999999999765422 22345678888999998875
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.71 E-value=6.6e-18 Score=128.96 Aligned_cols=99 Identities=13% Similarity=0.054 Sum_probs=80.3
Q ss_pred ceEEEEecCCCCCcch----hhHHHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 55 KATVYMTHGYGSDTGW----MFQKICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 55 ~~~vv~~hG~~~~~~~----~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
+-+|||+||++++... .|..+.+.|.++||+|+++|++|+|.+. ...+++.+++.++++... .+
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~------~~a~~l~~~i~~~~~~~g------~~ 74 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEEIVALSG------QP 74 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH------HHHHHHHHHHHHHHHHHC------CS
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH------HHHHHHHHHHHHHHHHcC------CC
Confidence 5569999999876431 3778999999999999999999998543 145566666666666665 34
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
+++++||||||.++..++..+|++ |+++|.++++.
T Consensus 75 ~v~ligHS~GG~~~r~~~~~~p~~-v~~lv~i~tPh 109 (285)
T d1ex9a_ 75 KVNLIGHSHGGPTIRYVAAVRPDL-IASATSVGAPH 109 (285)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESCCT
T ss_pred eEEEEEECccHHHHHHHHHHCCcc-ceeEEEECCCC
Confidence 899999999999999999999999 99999998764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.70 E-value=9.6e-15 Score=112.49 Aligned_cols=142 Identities=10% Similarity=-0.011 Sum_probs=96.9
Q ss_pred cccCCccceeEEecC-CC-cEEEEEecCCCCCCceEEEEecCCCCCcc-hhhHH---HHHHHhcCCcEEEEeccccCcCC
Q 020630 24 TSQGVRNGKEYFETP-NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQK---ICISYATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~-~g-~l~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~---~~~~l~~~g~~vi~~d~~G~G~s 97 (323)
.+.+++.+...+.++ .| ++.++++.|. ++.|+|+++||.+++.. ..|.. +.+.+.+.|+.++.++..+.+..
T Consensus 3 ~~~~~~v~~~~~~s~~~~r~~~~~v~~p~--~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 80 (288)
T d1sfra_ 3 SRPGLPVEYLQVPSPSMGRDIKVQFQSGG--ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFY 80 (288)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEECCS--TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTT
T ss_pred CCCCCEEEEEEEECCCCCcEEEEEEeCCC--CCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCC
Confidence 455566666666554 45 7887777664 56899999999876421 13322 46677788999999998766544
Q ss_pred CCCCCC--------CCChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 98 DGIRCY--------LGDMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 98 ~~~~~~--------~~~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
...... ....+. ..+.+++.++..++.++..++.++|+||||..|+.++.++|++ +++++.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~--~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~-f~av~~~Sg~~~~~ 157 (288)
T d1sfra_ 81 SDWYQPACGKAGCQTYKWET--FLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQ-FVYAGAMSGLLDPS 157 (288)
T ss_dssp CBCSSCEEETTEEECCBHHH--HHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSCTT
T ss_pred ccccCcccccccccchhHHH--HHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhcccc-ccEEEEecCccccc
Confidence 321110 012222 2344455555555555677899999999999999999999999 99999999877644
Q ss_pred C
Q 020630 170 E 170 (323)
Q Consensus 170 ~ 170 (323)
.
T Consensus 158 ~ 158 (288)
T d1sfra_ 158 Q 158 (288)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.64 E-value=1.5e-14 Score=109.40 Aligned_cols=196 Identities=13% Similarity=0.055 Sum_probs=113.5
Q ss_pred ceeEEe-cCCC-cEEEEEecCCC---CCCceEEEEecCCCCCcc-h-----hhHHHHHHHhcC-CcEEEEeccccCcCCC
Q 020630 31 GKEYFE-TPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-----MFQKICISYATW-GYAVFAADLLGHGRSD 98 (323)
Q Consensus 31 ~~~~~~-~~~g-~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~-~-----~~~~~~~~l~~~-g~~vi~~d~~G~G~s~ 98 (323)
+...+. ..+| ++.+.+|.|.+ +++-|+||++||.+++.. + ........+... +...+.+...+.+...
T Consensus 23 ~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (255)
T d1jjfa_ 23 VNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAG 102 (255)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCC
T ss_pred EEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccccccc
Confidence 344444 4567 99999999975 345689999999886542 1 112222333222 2222222222222222
Q ss_pred CCCCCCCChHHHHhhHHHHHHHHHhhCC--CCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhH
Q 020630 99 GIRCYLGDMEKVAASSLSFFKHVRHSEP--YRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~ 176 (323)
..... .........+.+++..+..... .+..+++++|+|+||..++.++.++|+. +++++.+++.........
T Consensus 103 ~~~~~-~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~-F~~v~~~sg~~~~~~~~~--- 177 (255)
T d1jjfa_ 103 PGIAD-GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDK-FAYIGPISAAPNTYPNER--- 177 (255)
T ss_dssp TTCSC-HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTT-CSEEEEESCCTTSCCHHH---
T ss_pred ccccc-cccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCc-ccEEEEEccCcCCccccc---
Confidence 11111 0111122233334444444322 3456899999999999999999999999 999999887653211000
Q ss_pred HHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEee
Q 020630 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 256 (323)
.... ..........|+++.+|
T Consensus 178 ---------------------------~~~~--------------------------------~~~~~~~~~~~~~i~~G 198 (255)
T d1jjfa_ 178 ---------------------------LFPD--------------------------------GGKAAREKLKLLFIACG 198 (255)
T ss_dssp ---------------------------HCTT--------------------------------TTHHHHHHCSEEEEEEE
T ss_pred ---------------------------cccc--------------------------------HHHHhhccCCcceEEeC
Confidence 0000 00011223579999999
Q ss_pred CCCcccCchhHHHHHHHhc--CCCCcEEEecCCCcccc
Q 020630 257 TADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
++|..++. .+.+.+.+. +-++++.+++++||...
T Consensus 199 ~~D~~~~~--~~~~~~~L~~~g~~~~~~~~~~ggH~~~ 234 (255)
T d1jjfa_ 199 TNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN 234 (255)
T ss_dssp TTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH
T ss_pred CCCCCchH--HHHHHHHHHHCCCCEEEEEECCCCcCHH
Confidence 99988763 456666663 34578889999999765
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.60 E-value=1.2e-14 Score=109.27 Aligned_cols=204 Identities=11% Similarity=0.043 Sum_probs=117.5
Q ss_pred ccceeEEecC-CC-cEEEEEecCCC--CCCceEEEEecCCCCCcchhhHHHHHHHhcCCc----EEEEeccccCcCCCCC
Q 020630 29 RNGKEYFETP-NG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISYATWGY----AVFAADLLGHGRSDGI 100 (323)
Q Consensus 29 ~~~~~~~~~~-~g-~l~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~----~vi~~d~~G~G~s~~~ 100 (323)
+..+..+.+. .| +..+.+|.|.+ .++.|+||++||.+...........+.+...|. .++.++....+.....
T Consensus 14 ~~~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~ 93 (246)
T d3c8da2 14 PAKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHE 93 (246)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHH
T ss_pred CcEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccccccc
Confidence 3345555554 36 88888988865 245699999999653221123334455555543 2333332211100000
Q ss_pred CCCCCC-hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCCCCchhHHHH
Q 020630 101 RCYLGD-MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 101 ~~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~~~~~~~~~~ 179 (323)
...... .+.+.+++..+++.... ...+..++.++|+||||..|+.++.++|+. +++++.+++..........
T Consensus 94 ~~~~~~~~~~~~~el~~~v~~~~~-~~~d~~~~~i~G~S~GG~~al~~~~~~P~~-F~a~~~~sg~~~~~~~~~~----- 166 (246)
T d3c8da2 94 LPCNADFWLAVQQELLPLVKVIAP-FSDRADRTVVAGQSFGGLSALYAGLHWPER-FGCVLSQSGSYWWPHRGGQ----- 166 (246)
T ss_dssp SSSCHHHHHHHHHTHHHHHHHHSC-CCCCGGGCEEEEETHHHHHHHHHHHHCTTT-CCEEEEESCCTTTTCTTSS-----
T ss_pred cCccHHHHHHHHHHhhhHHHHhcc-cccCccceEEEecCchhHHHhhhhccCCch-hcEEEcCCcccccccCCcc-----
Confidence 000001 22334555555554322 123456899999999999999999999999 9999999986543211000
Q ss_pred HHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHHhcCCcccccEEEEeeCCC
Q 020630 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
..... . .............|+++.+|+.|
T Consensus 167 --------------------------~~~~~--------------------~-----~~~~~~~~~~~~~~~~l~~G~~D 195 (246)
T d3c8da2 167 --------------------------QEGVL--------------------L-----EKLKAGEVSAEGLRIVLEAGIRE 195 (246)
T ss_dssp --------------------------SCCHH--------------------H-----HHHHTTSSCCCSCEEEEEEESSC
T ss_pred --------------------------chHHH--------------------H-----HHhhhhhhhccCCCeEEEecCCC
Confidence 00000 0 00012334556789999999999
Q ss_pred cccCchhHHHHHHHhc--CCCCcEEEecCCCcccc
Q 020630 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
..+ ...++.+.+.+. +-.+++.+++| ||...
T Consensus 196 ~~~-~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~ 228 (246)
T d3c8da2 196 PMI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL 228 (246)
T ss_dssp HHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH
T ss_pred cch-hHHHHHHHHHHHHCCCCEEEEEeCC-CCChH
Confidence 866 466788888874 23467788887 79765
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=1.1e-12 Score=99.53 Aligned_cols=130 Identities=10% Similarity=0.009 Sum_probs=87.3
Q ss_pred cceeEEecCC-C-cEEEEEecCCCCCCceEEEEecCCCCC--cchhhHH---HHHHHhcCCcEEEEeccccCc-CCCCCC
Q 020630 30 NGKEYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGYGSD--TGWMFQK---ICISYATWGYAVFAADLLGHG-RSDGIR 101 (323)
Q Consensus 30 ~~~~~~~~~~-g-~l~~~~~~~~~~~~~~~vv~~hG~~~~--~~~~~~~---~~~~l~~~g~~vi~~d~~G~G-~s~~~~ 101 (323)
.+..++.++. | .|...++.+. .|+|+++||.++. .. .|.. +.+.+.+.++.|+.+|--..+ .+....
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~~~----~pvlylLhG~~g~~~~~-~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~ 78 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLAGG----PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQ 78 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEECCS----SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSS
T ss_pred eEEEEEecccCCceeeEEEECCC----CCEEEEcCCCCCCCCcc-hhhhccHHHHHHhhCCeEEEEECCCCCcCCccccc
Confidence 4556666554 4 6887777653 5899999997653 22 3433 566777789999999842111 111111
Q ss_pred CCCCChHH-HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCC
Q 020630 102 CYLGDMEK-VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 102 ~~~~~~~~-~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~ 168 (323)
.....+++ +++++. .++..+++++..++.+.|+||||..|+.+|.++|+. +++++.+++....
T Consensus 79 ~~~~~~~tfl~~eL~---~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~-F~av~~~SG~~~~ 142 (267)
T d1r88a_ 79 DGSKQWDTFLSAELP---DWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDR-FGFAGSMSGFLYP 142 (267)
T ss_dssp CTTCBHHHHHHTHHH---HHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCCCT
T ss_pred cccccHHHHHHHHHH---HHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCccc-ccEEEEeCCccCC
Confidence 11123433 334444 455555566678999999999999999999999999 9999999987654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.57 E-value=9.1e-13 Score=100.65 Aligned_cols=134 Identities=11% Similarity=0.044 Sum_probs=86.3
Q ss_pred CCccceeEEecCC-C-cEEEEEecCCCCCCceEEEEecCCCCC--cchhhH---HHHHHHhcCCcEEEEeccccCcCCCC
Q 020630 27 GVRNGKEYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGYGSD--TGWMFQ---KICISYATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 27 ~~~~~~~~~~~~~-g-~l~~~~~~~~~~~~~~~vv~~hG~~~~--~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~s~~ 99 (323)
+.+.+...+.+.- | .|...+-+ ++.|+|+|+||.++. .. .|. .+.+.+.+.|+.|+.+|-...+....
T Consensus 3 ~~~v~~~~~~s~~~~r~i~~~~~~----~~~p~lyllhG~~g~~d~~-~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~ 77 (280)
T d1dqza_ 3 GLPVEYLQVPSASMGRDIKVQFQG----GGPHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTD 77 (280)
T ss_dssp SSCEEEEEEEETTTTEEEEEEEEC----CSSSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSB
T ss_pred CcEEEEEEEecccCCCcceEEeeC----CCCCEEEECCCCCCCCccc-hhhhcchHHHHHHhCCcEEEEECCCCCCcCcc
Confidence 3444555554443 4 66665532 337999999998653 22 343 25567778899999998432211110
Q ss_pred --------CCCCCCChHH-HHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 100 --------IRCYLGDMEK-VAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 100 --------~~~~~~~~~~-~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
.......+++ +++++...|+. ++.++..++.+.|+||||..|+.+|.++|++ +++++.+++.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~el~~~i~~---~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~-F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 78 WYQPSQSNGQNYTYKWETFLTREMPAWLQA---NKGVSPTGNAAVGLSMSGGSALILAAYYPQQ-FPYAASLSGFLNPS 152 (280)
T ss_dssp CSSSCTTTTCCSCCBHHHHHHTHHHHHHHH---HHCCCSSSCEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCCTT
T ss_pred ccCCcccccCCcchhHHHHHHHHHHHHHHH---hcCCCCCceEEEEechHHHHHHHHHHhCcCc-eeEEEEecCccCcc
Confidence 0011113333 34555555544 4444567899999999999999999999999 99999999877544
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=2.7e-14 Score=106.54 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=75.5
Q ss_pred EEEEecCCCCCcc--hhhHHHHHHHhcC--CcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCCE
Q 020630 57 TVYMTHGYGSDTG--WMFQKICISYATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLPA 132 (323)
Q Consensus 57 ~vv~~hG~~~~~~--~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~~ 132 (323)
+||++||++++.. ..+..+.+.+.+. |+.|+++++.....+...........+.++.+.+.|+..... ..++
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~----~~~v 82 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKL----QQGY 82 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG----TTCE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhcccc----ccce
Confidence 7999999987532 2577777777665 899999998654433211111124556666666666543322 3479
Q ss_pred EEEEechhHHHHHHHHhhcCCCCeeEEEEccCccC
Q 020630 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~ 167 (323)
.+|||||||.++-.++.+.+...|..+|.++++-.
T Consensus 83 ~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 83 NAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred eEEEEccccHHHHHHHHHcCCCCcceEEEECCCCC
Confidence 99999999999999999988766999998887644
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=6.1e-13 Score=101.01 Aligned_cols=200 Identities=11% Similarity=0.045 Sum_probs=116.1
Q ss_pred cceeEEecCCC--cEEEEEecCCC---CCCceEEEEecCCCCCcchhhHHHHHHHhcCCcEEEEeccccCcCCC------
Q 020630 30 NGKEYFETPNG--KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQKICISYATWGYAVFAADLLGHGRSD------ 98 (323)
Q Consensus 30 ~~~~~~~~~~g--~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~------ 98 (323)
.+...+.+.|| ++.++++.|.+ +++-|+|+++||...................++.|+++++++...-.
T Consensus 13 ~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~~ 92 (265)
T d2gzsa1 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAY 92 (265)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHH
T ss_pred eEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCccccccc
Confidence 45677888888 68888888765 24458999999954221101111223344568999999887653211
Q ss_pred ---------CCCC-------CCCChHHHHh-hHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEE
Q 020630 99 ---------GIRC-------YLGDMEKVAA-SSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 99 ---------~~~~-------~~~~~~~~~~-d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il 161 (323)
.... .....+.+.+ ...+++..+......+..++.++|+|+||..++.++.+ ++. +.+++.
T Consensus 93 d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~-f~~~~a 170 (265)
T d2gzsa1 93 DYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSY-FRSYYS 170 (265)
T ss_dssp HTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSS-CSEEEE
T ss_pred ccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-Ccc-cCEEEE
Confidence 0000 0001122222 22335555555554455678999999999999987665 455 778887
Q ss_pred ccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhhHHHH
Q 020630 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|....... . +..... ..
T Consensus 171 ~s~~~~~~~~--------~----------------------------------------------------~~~~~~-~~ 189 (265)
T d2gzsa1 171 ASPSLGRGYD--------A----------------------------------------------------LLSRVT-AV 189 (265)
T ss_dssp ESGGGSTTHH--------H----------------------------------------------------HHHHHH-TS
T ss_pred ECCcccccch--------h----------------------------------------------------hhhccc-cc
Confidence 7765421100 0 000000 00
Q ss_pred hcCCcccccEEEEeeCC--------CcccCchhHHHHHHHhc--CCCCcEEEecCCCcccc
Q 020630 242 DNFSKVTVPFLTVHGTA--------DGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~--------D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
........|+++.+|+. |..++....+.+.+.+. +.++++.+++|++|...
T Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~ 250 (265)
T d2gzsa1 190 EPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM 250 (265)
T ss_dssp CTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH
T ss_pred cccccCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchH
Confidence 11233356778888876 55566677777877773 45678999999999754
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.39 E-value=6.6e-11 Score=90.17 Aligned_cols=227 Identities=17% Similarity=0.150 Sum_probs=124.1
Q ss_pred CC-cEEEEEecCCC--------CCCceEEEEecCCCCCcchhhHH---HHHHHhcCCcEEEEeccccC------------
Q 020630 39 NG-KLFTQSFLPLD--------QKVKATVYMTHGYGSDTGWMFQK---ICISYATWGYAVFAADLLGH------------ 94 (323)
Q Consensus 39 ~g-~l~~~~~~~~~--------~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~------------ 94 (323)
-| +..+.+|.|++ ++.-|+|+++||.+++.. .|.. +.+...+.+..|+.++....
T Consensus 24 l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~ 102 (299)
T d1pv1a_ 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSW 102 (299)
T ss_dssp SSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCS
T ss_pred cCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHH-HHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccc
Confidence 45 88899998864 123589999999998754 4432 33444455788888774321
Q ss_pred ----cCCCCCCC------CCCChH-HHHhhHHHHHHHHHhhCC----CCCCCEEEEEechhHHHHHHHHhh--cCCCCee
Q 020630 95 ----GRSDGIRC------YLGDME-KVAASSLSFFKHVRHSEP----YRDLPAFLFGESMGGAATMLMYFQ--SEPNTWT 157 (323)
Q Consensus 95 ----G~s~~~~~------~~~~~~-~~~~d~~~~i~~l~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~ 157 (323)
+.+..... ....++ -+++++...|+..-.... .+..+..|.|+||||.-|+.+|.+ +|++ ..
T Consensus 103 ~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~-f~ 181 (299)
T d1pv1a_ 103 DFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKR-YK 181 (299)
T ss_dssp SSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTC-CS
T ss_pred cccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCc-eE
Confidence 11111100 001222 244666666655432211 012468999999999999999976 5788 88
Q ss_pred EEEEccCccCCCCCCchhHHHHHHhhcccccccccccCCCcccccccccChhhHHHhhcCCcccCCCCCchhHHHHHHhh
Q 020630 158 GLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237 (323)
Q Consensus 158 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (323)
+++..++.......... ..............+. .. +.
T Consensus 182 ~~~s~s~~~~~~~~~~~---~~~~~~~~g~~~~~~~---------------------~~---------------~~---- 218 (299)
T d1pv1a_ 182 SCSAFAPIVNPSNVPWG---QKAFKGYLGEEKAQWE---------------------AY---------------DP---- 218 (299)
T ss_dssp EEEEESCCCCSTTSHHH---HHHHHHHSCC----CG---------------------GG---------------CH----
T ss_pred EEeeccCcCCcccccch---hhhhhhhcccchhhhh---------------------hc---------------CH----
Confidence 88888876543322111 1111110000000000 00 00
Q ss_pred HHHHhcCCcc-cccEEEEeeCCCcccCch-hHHHHHHHhcCCC----CcEEEecCCCccccccCCchhHHHHHHHHHHHH
Q 020630 238 QYIQDNFSKV-TVPFLTVHGTADGVTCPT-SSKLLYEKASSAD----KSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 238 ~~~~~~~~~~-~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
..+.....+. ..++++.+|++|...+.. ..+.+.+.+...+ .++...+|.+|... +++......++|+
T Consensus 219 ~~l~~~~~~~~~~~i~~~~G~~D~~~~~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~------yW~~~i~~~l~f~ 292 (299)
T d1pv1a_ 219 CLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY------FVSTFVPEHAEFH 292 (299)
T ss_dssp HHHGGGSCCCTTCCEEEECCTTCTTTTTTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHH------HHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCcceeEecCCCCcchhhhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHH------HHHHHHHHHHHHH
Confidence 0011222222 456888889999877653 2455655543222 34556677789875 3566777777888
Q ss_pred HHHHh
Q 020630 312 DERVE 316 (323)
Q Consensus 312 ~~~~~ 316 (323)
.++++
T Consensus 293 a~~lg 297 (299)
T d1pv1a_ 293 ARNLG 297 (299)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 77653
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.35 E-value=1.8e-10 Score=87.55 Aligned_cols=133 Identities=17% Similarity=0.138 Sum_probs=83.4
Q ss_pred ccceeEEecCCCcEEEEEecCCC---CCCceEEEEecCCCCCcchh------hHHHHHHH----hcCCcEEEEeccccCc
Q 020630 29 RNGKEYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDTGWM------FQKICISY----ATWGYAVFAADLLGHG 95 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~------~~~~~~~l----~~~g~~vi~~d~~G~G 95 (323)
..+...++..+|+..+.+|.|++ +++-|+|+++||.+++.... ...+...+ ....+.|+.++..+.+
T Consensus 26 ~v~~~~~~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 105 (273)
T d1wb4a1 26 RIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGN 105 (273)
T ss_dssp EEEEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTT
T ss_pred eEEEEEEecCCCeEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCC
Confidence 34566778878866888999975 34469999999988653211 12222222 2235778888876543
Q ss_pred CCCCCCCCCCChHHHHhhHHHHHHHHH---------hhCCCCCCCEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCcc
Q 020630 96 RSDGIRCYLGDMEKVAASSLSFFKHVR---------HSEPYRDLPAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~d~~~~i~~l~---------~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~ 166 (323)
..... .......++...++..- ....++..++.+.|+|+||..++.+|.++|+. +++++.+++..
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~-f~a~~~~sg~~ 179 (273)
T d1wb4a1 106 CTAQN-----FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDY-VAYFMPLSGDY 179 (273)
T ss_dssp CCTTT-----HHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTT-CCEEEEESCCC
T ss_pred Ccccc-----chhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCc-ceEEEEeCccc
Confidence 22111 12222233322222110 00112356899999999999999999999999 99999998765
Q ss_pred C
Q 020630 167 V 167 (323)
Q Consensus 167 ~ 167 (323)
.
T Consensus 180 ~ 180 (273)
T d1wb4a1 180 W 180 (273)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.33 E-value=1.9e-12 Score=98.86 Aligned_cols=114 Identities=13% Similarity=0.117 Sum_probs=78.7
Q ss_pred CCceEEEEecCCCCCcch-hhHHHHHHH-hcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGW-MFQKICISY-ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~-~~~~~~~~l-~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|++|++|||.++... .+..+...+ ...+++||++|+.... +..-...........+.+..+|+.+....++..+
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a-~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-QTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc-CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 458999999999876432 234444444 4446999999997532 2110000013455667788888887766555678
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~ 169 (323)
+++|||||+||++|-.++.+ ..+ +..++.++|+....
T Consensus 147 ~vhlIGhSLGAhvAG~aG~~-~~~-l~rItgLDPA~P~F 183 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAGSR-TPG-LGRITGLDPVEASF 183 (337)
T ss_dssp GEEEEEETHHHHHHHHHHHT-STT-CCEEEEESCCCTTT
T ss_pred heEEEeecHHHhhhHHHHHh-hcc-ccceeccCCCcccc
Confidence 99999999999999765554 445 99999999887644
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.30 E-value=4.7e-12 Score=96.42 Aligned_cols=116 Identities=13% Similarity=0.058 Sum_probs=82.7
Q ss_pred CCceEEEEecCCCCCcch-hhHHHHH-HHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 53 KVKATVYMTHGYGSDTGW-MFQKICI-SYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~~~~-~~~~~~~-~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
..+|++|++|||.++... .+..+.+ .|...+++||++|+.......- ...........+.+..+|+.+....++..+
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y-~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEY-TQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccch-HHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 458999999999876432 2334444 4444579999999975432110 000114556667788888887666555678
Q ss_pred CEEEEEechhHHHHHHHHhhcCCCCeeEEEEccCccCCCC
Q 020630 131 PAFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~il~~~~~~~~~ 170 (323)
+++|+|||+||++|-.+....+.+ |..++.++|+.....
T Consensus 147 ~vhlIGhSLGAhiaG~ag~~l~~k-igrItgLDPA~P~F~ 185 (338)
T d1bu8a2 147 NVHLIGHSLGAHVVGEAGRRLEGH-VGRITGLDPAEPCFQ 185 (338)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCTTTT
T ss_pred eeEEEeccHHHHHHHHHHHhhccc-cccccccccCcCccc
Confidence 999999999999999998888777 999999999876543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=9.5e-10 Score=89.67 Aligned_cols=136 Identities=17% Similarity=0.127 Sum_probs=95.9
Q ss_pred cceeEEecCCC-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHHH------------------HhcCCcEEEEe
Q 020630 30 NGKEYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICIS------------------YATWGYAVFAA 89 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~------------------l~~~g~~vi~~ 89 (323)
....++...++ .|+|+.+.... ...+|++|++-|+++.++ .+..+.+. +.+. .+++-+
T Consensus 21 ~ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~-anllfI 98 (452)
T d1ivya_ 21 QYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVLYL 98 (452)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGGS-SEEEEE
T ss_pred ceeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCcEEcCCCCeeccCCcchhcc-cCEEEE
Confidence 34556777777 99999887654 245799999999998876 55444321 2222 579999
Q ss_pred ccc-cCcCCCCCCC-CCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhh---cCCCCeeEEEEcc
Q 020630 90 DLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSA 163 (323)
Q Consensus 90 d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~il~~ 163 (323)
|.| |.|.|..... ...+..+.+.|+.+++..+-...+ ....+++|.|-|+||..+-.+|.. .+...++++++.+
T Consensus 99 DqPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~ign 178 (452)
T d1ivya_ 99 ESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGN 178 (452)
T ss_dssp CCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEES
T ss_pred ecCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCC
Confidence 986 9999864332 334667778887776665554443 346699999999999988777754 3434499999999
Q ss_pred CccC
Q 020630 164 PLFV 167 (323)
Q Consensus 164 ~~~~ 167 (323)
+..+
T Consensus 179 g~~d 182 (452)
T d1ivya_ 179 GLSS 182 (452)
T ss_dssp CCSB
T ss_pred CccC
Confidence 8765
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.15 E-value=3.4e-09 Score=85.26 Aligned_cols=134 Identities=13% Similarity=0.103 Sum_probs=94.0
Q ss_pred eeEEecCC-C-cEEEEEecCCC-CCCceEEEEecCCCCCcchhhHHHHH-----------------HHhcCCcEEEEecc
Q 020630 32 KEYFETPN-G-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI-----------------SYATWGYAVFAADL 91 (323)
Q Consensus 32 ~~~~~~~~-g-~l~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~l~~~g~~vi~~d~ 91 (323)
..++...+ + .|+|+.+...+ ...+|+||++-|+++.++ .+..+.+ .+.+. .+++-+|.
T Consensus 18 sGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS-~~g~~~e~GP~~i~~~~~~~~N~~sW~~~-anllfiD~ 95 (421)
T d1wpxa1 18 TGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFELGPSSIGPDLKPIGNPYSWNSN-ATVIFLDQ 95 (421)
T ss_dssp EEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSCEEECTTCGGGS-SEEEEECC
T ss_pred eeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEECCCCccccCCcccccc-cCEEEEec
Confidence 44565543 5 89998877643 355799999999998877 5555443 12222 58999995
Q ss_pred c-cCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCC---CCCCEEEEEechhHHHHHHHHhh-----cCCCCeeEEEEc
Q 020630 92 L-GHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPY---RDLPAFLFGESMGGAATMLMYFQ-----SEPNTWTGLIFS 162 (323)
Q Consensus 92 ~-G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~~v~~~il~ 162 (323)
| |.|.|-.......+-.+.++|+.++++..-...+. ...+++|.|-|+||..+-.+|.. .+...++++++.
T Consensus 96 PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iG 175 (421)
T d1wpxa1 96 PVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIG 175 (421)
T ss_dssp STTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEE
T ss_pred CCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEec
Confidence 5 99999644444456777888888888777666541 24589999999999988777754 122348899999
Q ss_pred cCccC
Q 020630 163 APLFV 167 (323)
Q Consensus 163 ~~~~~ 167 (323)
++..+
T Consensus 176 ng~~d 180 (421)
T d1wpxa1 176 NGLTD 180 (421)
T ss_dssp SCCCC
T ss_pred CCccc
Confidence 88654
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.02 E-value=4.4e-10 Score=85.83 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=39.3
Q ss_pred ccccEEEEeeCCCcccCchhHHHHHHHhcC----CCCcEEEecCCCccccc
Q 020630 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASS----ADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ 293 (323)
...|+++++|++|..|++..++.+.+.+.. .+++++..+++||.+.-
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 367999999999999999999999988842 24567888999999864
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.87 E-value=1.4e-09 Score=84.85 Aligned_cols=104 Identities=13% Similarity=0.004 Sum_probs=73.5
Q ss_pred ceEEEEecCCCCCc------chhhH----HHHHHHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhh
Q 020630 55 KATVYMTHGYGSDT------GWMFQ----KICISYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHS 124 (323)
Q Consensus 55 ~~~vv~~hG~~~~~------~~~~~----~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~ 124 (323)
+=+|||+||+.+-. -.+|. .+.+.|.+.|++|++......+ +.++-+.++...|+.....
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~----------S~~~RA~eL~~~I~~~~~d 76 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS----------SNWDRACEAYAQLVGGTVD 76 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB----------CHHHHHHHHHHHHHCEEEE
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc----------CHHHHHHHHHHHHhhhhhh
Confidence 56899999975431 11443 3788898999999999876443 6777777777777654322
Q ss_pred CC-----------------------CCCCCEEEEEechhHHHHHHHHhhcC-------------------------CCCe
Q 020630 125 EP-----------------------YRDLPAFLFGESMGGAATMLMYFQSE-------------------------PNTW 156 (323)
Q Consensus 125 ~~-----------------------~~~~~~~l~G~S~Gg~~a~~~a~~~p-------------------------~~~v 156 (323)
++ ....||+||||||||..+-.++...+ +. |
T Consensus 77 ~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-V 155 (388)
T d1ku0a_ 77 YGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRF-V 155 (388)
T ss_dssp CCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC-E
T ss_pred hhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcc-e
Confidence 21 01248999999999999988876432 35 9
Q ss_pred eEEEEccCccCCC
Q 020630 157 TGLIFSAPLFVIP 169 (323)
Q Consensus 157 ~~~il~~~~~~~~ 169 (323)
++|+-++++-...
T Consensus 156 ~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 156 LSVTTIATPHDGT 168 (388)
T ss_dssp EEEEEESCCTTCC
T ss_pred EEEEeccCCCCCc
Confidence 9999998776544
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.79 E-value=9.8e-08 Score=77.89 Aligned_cols=125 Identities=17% Similarity=0.124 Sum_probs=83.1
Q ss_pred cEEEEEecCCCC---CCceEEEEecCCCCCcchhhHHHHH-----------------HHhcCCcEEEEeccc-cCcCCCC
Q 020630 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQKICI-----------------SYATWGYAVFAADLL-GHGRSDG 99 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~l~~~g~~vi~~d~~-G~G~s~~ 99 (323)
.++|+.+..... ..+|+||++-|+++.++ .+..+.+ .+.+. .+++-+|.| |.|.|-.
T Consensus 50 ~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS-~~g~f~E~GP~~v~~~~~l~~Np~SWn~~-an~lfIDqPvGvGfSy~ 127 (483)
T d1ac5a_ 50 EYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISK-GDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp EEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGT-SEEEEECCSTTSTTCSS
T ss_pred eEEEEEEEecCCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCeEECCCCceeeCCCccccc-CCEEEEeCCCCcCeeec
Confidence 577776654432 23599999999998876 4543332 11222 589999975 8998853
Q ss_pred CC---------CCCCChHHHHhhHHHHHHHHHhhCC-CCCCCEEEEEechhHHHHHHHHhhc-----------CCCCeeE
Q 020630 100 IR---------CYLGDMEKVAASSLSFFKHVRHSEP-YRDLPAFLFGESMGGAATMLMYFQS-----------EPNTWTG 158 (323)
Q Consensus 100 ~~---------~~~~~~~~~~~d~~~~i~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~-----------p~~~v~~ 158 (323)
.. ....+.++.++++..+++..-...+ ....+++|.|-|+||..+-.+|..- +...+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkG 207 (483)
T d1ac5a_ 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred CCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCccccee
Confidence 32 1233567788888888776654443 2356899999999998877776541 1223899
Q ss_pred EEEccCccC
Q 020630 159 LIFSAPLFV 167 (323)
Q Consensus 159 ~il~~~~~~ 167 (323)
+.+.++..+
T Consensus 208 i~IGNg~~d 216 (483)
T d1ac5a_ 208 LLIGNGWID 216 (483)
T ss_dssp EEEEEECCC
T ss_pred eeecCCccC
Confidence 988877654
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.43 E-value=4.2e-07 Score=74.44 Aligned_cols=123 Identities=15% Similarity=0.070 Sum_probs=76.6
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCCCC---c-chhhHHHHHHHhcCCcEEEEeccc----cCcCCCC-CCCCCCChHHH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD---T-GWMFQKICISYATWGYAVFAADLL----GHGRSDG-IRCYLGDMEKV 110 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~~~---~-~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~-~~~~~~~~~~~ 110 (323)
-|+.-+|.|... ++.|++|+|||.+.. . ...+. ....+.+.+.-||+++|| |+=.... .... .-.--
T Consensus 81 CL~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~--~gN~G 157 (483)
T d1qe3a_ 81 CLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYD-GSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY--SDNLG 157 (483)
T ss_dssp CCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGC-CHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTS--CSCHH
T ss_pred CCEEEEEECCCCCCCCceEEEEeecccccCCccccccc-cccccccCceEEEeecccccchhhcccccccccc--ccccc
Confidence 477777777653 356999999998632 1 21221 222334457999999999 3321111 1111 11122
Q ss_pred HhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 111 AASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 111 ~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
..|...+|++++.. .+.|+.+|.|+|+|.||..+..++... ... ++++|+.++...
T Consensus 158 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gL-F~raI~~SGs~~ 218 (483)
T d1qe3a_ 158 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGL-FQKAIMESGASR 218 (483)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS-CSEEEEESCCCC
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCc-ceeeccccCCcc
Confidence 35666667776654 234577999999999999888776642 245 899999887653
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.28 E-value=1.5e-06 Score=72.17 Aligned_cols=124 Identities=14% Similarity=0.083 Sum_probs=76.3
Q ss_pred cEEEEEecCCC--CCCceEEEEecCCCCC----cchhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHH
Q 020630 41 KLFTQSFLPLD--QKVKATVYMTHGYGSD----TGWMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~ 110 (323)
-|+..+|.|.. .+..|++|++||.+.. ....+... ...++.+.-|++++|| |+-.+........+. =
T Consensus 96 CL~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~-~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~--G 172 (542)
T d2ha2a1 96 CLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGR-FLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNV--G 172 (542)
T ss_dssp CCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTH-HHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCH--H
T ss_pred CCEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCch-hhhhhccceeEeeeeeccceeeecccccccCCCcC--C
Confidence 46666776653 2456999999997632 22122221 1223457999999999 443222111111122 2
Q ss_pred HhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccCC
Q 020630 111 AASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 111 ~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~~ 168 (323)
..|...+|+|++.. .+.|+.+|.|+|+|.||..+..++... ... +.++|+.++....
T Consensus 173 l~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~L-F~~aI~~SG~~~~ 234 (542)
T d2ha2a1 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL-FHRAVLQSGTPNG 234 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTT-CSEEEEESCCSSS
T ss_pred cccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHH-hhhheeeccccCC
Confidence 45677777777654 234577999999999999888766543 235 8889988775543
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.26 E-value=1.6e-06 Score=71.78 Aligned_cols=124 Identities=15% Similarity=0.070 Sum_probs=76.0
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCCCC----cchhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHHH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD----TGWMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|+.-+|.|... +..|++|+|||.+.. ....+. ....+++.+.-||+++|| |+-..........+. =.
T Consensus 91 CL~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~--Gl 167 (532)
T d1ea5a_ 91 CLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYN-GKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNV--GL 167 (532)
T ss_dssp CCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGC-THHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCH--HH
T ss_pred CCEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccC-cchhhcccCccEEEEeeccccccccccccccCCCCcc--cc
Confidence 466677777642 457999999997522 111222 122344568999999999 332222111111122 24
Q ss_pred hhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccCC
Q 020630 112 ASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 112 ~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~~ 168 (323)
.|...+|+|++.. .+.|+.+|.|+|+|.||..+..++... ... +.++|+.++....
T Consensus 168 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~l-F~~aI~~Sg~~~~ 228 (532)
T d1ea5a_ 168 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDL-FRRAILQSGSPNC 228 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTT-CSEEEEESCCTTC
T ss_pred hhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhh-hhhheeecccccC
Confidence 5666666666654 334577999999999998877666542 234 8889988766543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=2.5e-06 Score=70.48 Aligned_cols=124 Identities=17% Similarity=0.112 Sum_probs=74.2
Q ss_pred cEEEEEecCCCC-CCceEEEEecCCCCC----cchhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHHH
Q 020630 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD----TGWMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|+..+|.|... +..|++|+|||.+.. ....+... ...++.+.-|+++++| |+-..+..... +-..=.
T Consensus 89 CL~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~-~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl 165 (526)
T d1p0ia_ 89 CLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGK-FLARVERVIVVSMNYRVGALGFLALPGNPEA--PGNMGL 165 (526)
T ss_dssp CCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTH-HHHHHHCCEEEEECCCCHHHHHCCCTTCTTS--CSCHHH
T ss_pred CCEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCcc-ccccccceeEEecccccccccccCCCCcccc--cccccc
Confidence 366677777653 456999999998632 22122211 1223457999999999 22222111111 111223
Q ss_pred hhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCccCC
Q 020630 112 ASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 112 ~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~~~ 168 (323)
.|...+|++++.. .+.|..+|.|+|+|.||..+..++.. .... +.++|+.++....
T Consensus 166 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~l-f~~aI~~Sg~~~~ 226 (526)
T d1p0ia_ 166 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSL-FTRAILQSGSFNA 226 (526)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGG-CSEEEEESCCTTS
T ss_pred cchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhh-hhhhhcccccccC
Confidence 5666667776654 23457799999999999988655543 2334 8888887766543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=3.2e-06 Score=69.99 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=75.2
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCc--chhhHHHHHHHhcCCcEEEEeccc----cCcCCCCCCCCCCChHHHH
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT--GWMFQKICISYATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|+..+|.|.. ....|++|++||.+... ...+.. ...+++++.-||+++|| |+-.+.... ...+. =.
T Consensus 96 CL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~-~~gN~--Gl 171 (532)
T d2h7ca1 96 CLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGFFSTGDEH-SRGNW--GH 171 (532)
T ss_dssp CCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTT-CCCCH--HH
T ss_pred CCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeeccCCCccccccccc-ccccc--cc
Confidence 36667777754 23469999999986421 112221 22345568999999999 332222111 11122 24
Q ss_pred hhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCcc
Q 020630 112 ASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 112 ~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~ 166 (323)
.|...+|++++.. .+.|..+|.|+|+|.||..+..++.. .... ++++|+.++..
T Consensus 172 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L-F~raI~~SG~~ 230 (532)
T d2h7ca1 172 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL-FHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTS-CSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCc-chhhhhhcccc
Confidence 5666677777654 33457799999999999887776554 2345 88999888654
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.12 E-value=5.6e-06 Score=68.48 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=72.7
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCc--chhh--HHHH--HHHhcCCcEEEEecccc----CcCCCCCCCCCCCh
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT--GWMF--QKIC--ISYATWGYAVFAADLLG----HGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~--~~~~--~~~~--~~l~~~g~~vi~~d~~G----~G~s~~~~~~~~~~ 107 (323)
-|+.-+|.|.. .++.|++|+|||.+... ...+ ..+. ..+..++.-||++++|- +-........ ..-
T Consensus 97 CL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~-~~g 175 (534)
T d1llfa_ 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAE-GSG 175 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHH-TCT
T ss_pred CCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccc-ccc
Confidence 46777787743 24679999999987421 1011 2232 23456789999999992 2211100000 000
Q ss_pred HHHHhhHHHHHHHHHhhC---CCCCCCEEEEEechhHHHHHHHHh-hc-------CCCCeeEEEEccCcc
Q 020630 108 EKVAASSLSFFKHVRHSE---PYRDLPAFLFGESMGGAATMLMYF-QS-------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~-~~-------p~~~v~~~il~~~~~ 166 (323)
.-=..|...+|+|++..- +.|+.+|.|+|+|.||..+..... .. ... ++++|+.++..
T Consensus 176 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gL-F~raI~qSGs~ 244 (534)
T d1llfa_ 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPL-FRAGIMQSGAM 244 (534)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEES-CSEEEEESCCS
T ss_pred ccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhh-hhhhhhccCcc
Confidence 112356667777776642 345779999999999986654432 11 124 88899888654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.10 E-value=5.1e-06 Score=68.39 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=72.8
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCC----cchhhHHHHHHHhcCCcEEEEecccc--CcCCCCCC-CCCCChHHH
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSD----TGWMFQKICISYATWGYAVFAADLLG--HGRSDGIR-CYLGDMEKV 110 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~----~~~~~~~~~~~l~~~g~~vi~~d~~G--~G~s~~~~-~~~~~~~~~ 110 (323)
-|+.-+|.|.. .++.|++|++||.+.. ..+....... ..+.+.-|+.++||- +|.-.... ....+...-
T Consensus 80 CL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~-~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~G 158 (517)
T d1ukca_ 80 CLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQ-ASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 158 (517)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHH-HTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHH
T ss_pred CCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhh-hhccccceEEEEecccceeecCccccccccccchh
Confidence 36666777653 2345999999997632 2222333322 234568889999993 12111000 000011122
Q ss_pred HhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh----cCCCCeeEEEEccCccC
Q 020630 111 AASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ----SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 111 ~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~il~~~~~~ 167 (323)
..|...+|++++.. .+.|+.+|.|+|+|.||..+...+.. .... +.++|+.++...
T Consensus 159 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gL-F~raI~qSg~~~ 221 (517)
T d1ukca_ 159 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGL-FIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSS-CSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccc-cceeeecccccc
Confidence 35666667776664 23457799999999999877654433 1235 899999887544
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.07 E-value=3.4e-06 Score=69.92 Aligned_cols=124 Identities=14% Similarity=0.063 Sum_probs=73.3
Q ss_pred cEEEEEecCCC---CCCceEEEEecCCCCCcc--hhh--HHH-HHHH-hcCCcEEEEeccc----cCcCCCCCCCCCCCh
Q 020630 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMF--QKI-CISY-ATWGYAVFAADLL----GHGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~--~~~-~~~l-~~~g~~vi~~d~~----G~G~s~~~~~~~~~~ 107 (323)
-|+..+|.|.+ .++.|++|+|||.+.... ..+ ..+ ...+ +..+.-||+++|| |+-.+...... ..-
T Consensus 105 CL~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~-~~g 183 (544)
T d1thga_ 105 CLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAE-GNT 183 (544)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHH-TCT
T ss_pred CCEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhcc-ccc
Confidence 46777777753 245699999999874321 011 222 2233 4567999999999 33221100000 001
Q ss_pred HHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhhc--------CCCCeeEEEEccCcc
Q 020630 108 EKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 108 ~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~il~~~~~ 166 (323)
.-=..|...+|+|++.. .+.|..+|.|+|+|.||..+..++... ... ++++|+.++..
T Consensus 184 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gL-F~raI~qSG~~ 252 (544)
T d1thga_ 184 NAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKL-FHSAILQSGGP 252 (544)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEES-CSEEEEESCCC
T ss_pred cHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhh-hcccccccccc
Confidence 11235666666666654 234577999999999998776555431 135 88999988653
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.78 E-value=2.9e-05 Score=64.70 Aligned_cols=110 Identities=11% Similarity=-0.096 Sum_probs=65.7
Q ss_pred CCceEEEEecCCCCC----cchhhHHHHHHHh-cCCcEEEEecccc--CcCCC--------CCCCCCCChHHHHhhHHHH
Q 020630 53 KVKATVYMTHGYGSD----TGWMFQKICISYA-TWGYAVFAADLLG--HGRSD--------GIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 53 ~~~~~vv~~hG~~~~----~~~~~~~~~~~l~-~~g~~vi~~d~~G--~G~s~--------~~~~~~~~~~~~~~d~~~~ 117 (323)
++.|++|+|||.+.. ....+.. ..|+ +.+.-||+++||- +|.-. ..... +-.-=..|...+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~--~gN~Gl~Dq~~A 212 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEA--PGNVGLWDQALA 212 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSS--CSCHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeecceeccccccccccccccccccCC--CCcccchHHHHH
Confidence 446999999997632 2212221 2232 3358889999982 12110 00100 112234677777
Q ss_pred HHHHHhhC---CCCCCCEEEEEechhHHHHHHHHhhc--CCCCeeEEEEccCccC
Q 020630 118 FKHVRHSE---PYRDLPAFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 118 i~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~il~~~~~~ 167 (323)
|++++..- +.|+.+|.|+|+|.||..+..++... ... ++++|+.++...
T Consensus 213 L~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~l-f~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 213 IRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGL-VKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTS-CCEEEEESCCTT
T ss_pred HHHHHHhhhhhccCCCceEeccccCccceeeeeecccccccc-ccccceeccccc
Confidence 77777653 34577999999999999887655442 234 888888776544
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.68 E-value=5.8e-05 Score=62.92 Aligned_cols=120 Identities=16% Similarity=0.092 Sum_probs=70.7
Q ss_pred cEEEEEecCCC----CCCceEEEEecCCCCCcc----------hhhHHHHHHHh-cCCcEEEEeccc----cCcCCCCCC
Q 020630 41 KLFTQSFLPLD----QKVKATVYMTHGYGSDTG----------WMFQKICISYA-TWGYAVFAADLL----GHGRSDGIR 101 (323)
Q Consensus 41 ~l~~~~~~~~~----~~~~~~vv~~hG~~~~~~----------~~~~~~~~~l~-~~g~~vi~~d~~----G~G~s~~~~ 101 (323)
-|+.-+|.|.. .+..|++|+|||.+.... +.|+ ...|+ ..+.-||+++|| |+-.+.. .
T Consensus 80 CL~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~d--g~~la~~~~vIvVt~nYRlg~~GFl~~~~-~ 156 (579)
T d2bcea_ 80 CLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATRGNVIVVTFNYRVGPLGFLSTGD-S 156 (579)
T ss_dssp CCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGC--CHHHHHHHTCEEEEECCCCHHHHHCCCSS-T
T ss_pred CCEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccc--hhhhhccCCEEEEeecccccccccccccc-c
Confidence 36666676642 234699999999763211 0121 12233 235899999999 3321111 1
Q ss_pred CCCCChHHHHhhHHHHHHHHHhh---CCCCCCCEEEEEechhHHHHHHHHhh--cCCCCeeEEEEccCcc
Q 020630 102 CYLGDMEKVAASSLSFFKHVRHS---EPYRDLPAFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~il~~~~~ 166 (323)
....+ -=..|...+|+|++.. .+.|..+|.|+|+|.||..+..++.. .... ++++|+.++..
T Consensus 157 ~~~gN--~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gL-F~raI~~SGs~ 223 (579)
T d2bcea_ 157 NLPGN--YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGL-IKRAISQSGVG 223 (579)
T ss_dssp TCCCC--HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTT-CSEEEEESCCT
T ss_pred CCCcc--chhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCc-cccceeccCCc
Confidence 11111 1235566666666554 23457799999999999888765543 3445 89999988643
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=97.41 E-value=0.002 Score=44.60 Aligned_cols=107 Identities=12% Similarity=0.040 Sum_probs=64.5
Q ss_pred eEEEEecCCCCCcc--hhhHHHHH----HHhcCCcEEEEeccccCcCCCCCCCCCCChHHHHhhHHHHHHHHHhhCCCCC
Q 020630 56 ATVYMTHGYGSDTG--WMFQKICI----SYATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRHSEPYRD 129 (323)
Q Consensus 56 ~~vv~~hG~~~~~~--~~~~~~~~----~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 129 (323)
-.||+.-|.+.... ..-..+.+ .+...+..+..++++..........+..+...=+.++...+.....+.+ .
T Consensus 18 v~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP--~ 95 (197)
T d1cexa_ 18 VIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCP--D 95 (197)
T ss_dssp EEEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCT--T
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCC--C
Confidence 35666666554321 12222333 3333445666666553221111111122445556778888888888876 7
Q ss_pred CCEEEEEechhHHHHHHHHhhc----CCCCeeEEEEccCc
Q 020630 130 LPAFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPL 165 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~il~~~~ 165 (323)
.+++|+|+|.|+.++-.++... .++ |.++++++-+
T Consensus 96 tkiVL~GYSQGA~V~~~~~~~l~~~~~~~-V~avvlfGDP 134 (197)
T d1cexa_ 96 ATLIAGGYSQGAALAAASIEDLDSAIRDK-IAGTVLFGYT 134 (197)
T ss_dssp CEEEEEEETHHHHHHHHHHHHSCHHHHTT-EEEEEEESCT
T ss_pred CeEEEeeeccccHhhhcccccCChhhhhh-EEEEEEEeCC
Confidence 7999999999999998887753 245 9999998743
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=97.27 E-value=0.00057 Score=50.03 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=33.0
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+..+.+++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 104 ~~~i~~~i~~~i~~~~~~~~--~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 104 WISVQDQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCC--CcceEEeccchhHHHHHHHHHH
Confidence 45556677777777777765 5689999999999999987754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=97.16 E-value=0.00034 Score=51.37 Aligned_cols=43 Identities=21% Similarity=0.385 Sum_probs=32.9
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+..+.+++...++.+..+++ ..++++.|||+||.+|..+|..
T Consensus 111 ~~~~~~~~i~~~v~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 111 SYEQVVNDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCC--CceEEEEecccchHHHHHHHHH
Confidence 355566677777777766655 5689999999999999888754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=97.11 E-value=0.00041 Score=51.12 Aligned_cols=42 Identities=21% Similarity=0.268 Sum_probs=33.2
Q ss_pred hHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 107 MEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 107 ~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+..+.+++...++.+..+.+ ..++++.|||+||.+|..++..
T Consensus 117 ~~~~~~~v~~~v~~~~~~~~--~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 117 WRSVADTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--CcceeeeccchHHHHHHHHHHH
Confidence 45556677777777776665 5689999999999999988865
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=97.09 E-value=0.00034 Score=51.58 Aligned_cols=43 Identities=21% Similarity=0.293 Sum_probs=33.3
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+..+..++...|+.+..+++ ..++++.|||+||.+|..++..
T Consensus 115 ~~~~~~~~i~~~i~~~~~~~~--~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 115 SWKLVRDDIIKELKEVVAQNP--NYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEeccchHHHHHHHHHHH
Confidence 345566677777777766655 5689999999999999988765
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=97.03 E-value=0.00055 Score=50.31 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=32.1
Q ss_pred ChHHHHhhHHHHHHHHHhhCCCCCCCEEEEEechhHHHHHHHHhh
Q 020630 106 DMEKVAASSLSFFKHVRHSEPYRDLPAFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~i~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+..+..++...+..+..+++ ..++++.|||+||.+|..+|..
T Consensus 110 ~~~~v~~~i~~~i~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 110 SYGEVQNELVATVLDQFKQYP--SYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEecccchHHHHHHHHHH
Confidence 345555666666766666655 6689999999999999987754
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=96.86 E-value=0.003 Score=44.20 Aligned_cols=91 Identities=15% Similarity=0.063 Sum_probs=55.3
Q ss_pred EEEEecCCCCCcc-hhhHHHHHHHhc--CCcEEEEeccccCcCCC--CCCCCCCChHHHHhhHHHHHHHHHhhCCCCCCC
Q 020630 57 TVYMTHGYGSDTG-WMFQKICISYAT--WGYAVFAADLLGHGRSD--GIRCYLGDMEKVAASSLSFFKHVRHSEPYRDLP 131 (323)
Q Consensus 57 ~vv~~hG~~~~~~-~~~~~~~~~l~~--~g~~vi~~d~~G~G~s~--~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 131 (323)
.||+.-|.+.... .....++..+.+ .|-.+..++||..-... ....+..+..+=+.++...|.....+.+ ..+
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP--~tk 83 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCP--DTQ 83 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCT--TSE
T ss_pred EEEEecCCCCCCCCCcchHHHHHHHHhCCCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCC--CCe
Confidence 5666666654421 122233333322 25678888888753321 1111111334445677888888888876 679
Q ss_pred EEEEEechhHHHHHHHHh
Q 020630 132 AFLFGESMGGAATMLMYF 149 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~ 149 (323)
++|+|+|.|+.++-.++.
T Consensus 84 ivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 84 LVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp EEEEEETHHHHHHHHHHH
T ss_pred EEEEeeccchHHHHHHHh
Confidence 999999999999988764
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=96.44 E-value=0.02 Score=39.93 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=54.4
Q ss_pred EEEEecCCCCCc--chhhHHHHHHHhc--CCcEEEEeccccCcCCCC--CCCCCCChHHHHhhHHHHHHHHHhhCCCCCC
Q 020630 57 TVYMTHGYGSDT--GWMFQKICISYAT--WGYAVFAADLLGHGRSDG--IRCYLGDMEKVAASSLSFFKHVRHSEPYRDL 130 (323)
Q Consensus 57 ~vv~~hG~~~~~--~~~~~~~~~~l~~--~g~~vi~~d~~G~G~s~~--~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 130 (323)
.||++-|.+... ... ..+...+.+ .|-.+..++||....... ...+..+..+=+..+...|.....+.+ ..
T Consensus 6 ~vi~arGT~E~~~~G~~-~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP--~t 82 (207)
T d1g66a_ 6 HVFGARETTASPGYGSS-STVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCP--ST 82 (207)
T ss_dssp EEEEECCTTCCSSCGGG-HHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHST--TC
T ss_pred EEEEeCCCCCCCCCCcc-HHHHHHHHHhcCCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCC--CC
Confidence 566677766432 212 222222221 256788889986432211 111112344445677778888877776 66
Q ss_pred CEEEEEechhHHHHHHHHh
Q 020630 131 PAFLFGESMGGAATMLMYF 149 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~ 149 (323)
+++|+|+|.|+.++-.++.
T Consensus 83 k~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 83 KIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp EEEEEEETHHHHHHHHHHH
T ss_pred cEEEEeeccccHHHHHHHh
Confidence 9999999999999987764
|
| >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/glutamate racemase family: Aspartate/glutamate racemase domain: Glutamate racemase species: Aquifex pyrophilus [TaxId: 2714]
Probab=81.02 E-value=1.4 Score=26.29 Aligned_cols=47 Identities=4% Similarity=-0.024 Sum_probs=36.1
Q ss_pred hHHHHHHHhcCCCCcEEEecCCCccccccCCchhHHHHHHHHHHHHHHH
Q 020630 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+++.+.+ |+..++.+-+..|++.-+++.+...+....+.+|+.++
T Consensus 15 Vl~~l~~~l--P~~~~iY~~D~a~~PYG~ks~~~I~~~~~~~~~~l~~~ 61 (105)
T d1b74a1 15 VLKAIRNRY--RKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDK 61 (105)
T ss_dssp HHHHHHHHS--SSCEEEEEECGGGCCGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 345667777 78899999999999998887776666777777777653
|