Citrus Sinensis ID: 020633
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 323 | 2.2.26 [Sep-21-2011] | |||||||
| Q8R431 | 303 | Monoglyceride lipase OS=R | yes | no | 0.795 | 0.848 | 0.275 | 2e-21 | |
| O35678 | 303 | Monoglyceride lipase OS=M | yes | no | 0.792 | 0.844 | 0.270 | 2e-21 | |
| Q99685 | 303 | Monoglyceride lipase OS=H | yes | no | 0.773 | 0.825 | 0.283 | 7e-21 | |
| Q55EQ3 | 937 | Uncharacterized abhydrola | no | no | 0.758 | 0.261 | 0.300 | 5e-19 | |
| P28321 | 313 | Monoglyceride lipase OS=S | yes | no | 0.823 | 0.849 | 0.267 | 2e-16 | |
| O94305 | 378 | Putative monoglyceride li | yes | no | 0.724 | 0.619 | 0.256 | 4e-08 | |
| O34705 | 259 | Phospholipase YtpA OS=Bac | yes | no | 0.761 | 0.949 | 0.220 | 0.0008 |
| >sp|Q8R431|MGLL_RAT Monoglyceride lipase OS=Rattus norvegicus GN=Mgll PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 12/269 (4%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA ++++HG G G + ++ VFA D +GHG+S+G R + D +
Sbjct: 42 KALIFVSHGAGEHCGR-YDELAQMLKRLDMLVFAHDHVGHGQSEGERMVVSDFQVFVRDL 100
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-PENMK 173
L V+ P ++P FL G SMGGA ++L + P ++G+I +PL + PE+
Sbjct: 101 LQHVNTVQKDYP--EVPVFLLGHSMGGAISILAAAE-RPTHFSGMILISPLILANPESA- 156
Query: 174 PSKLHLFMYGLL-FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
S L + LL F L + D+ ++ + + ++ + S+P +V +
Sbjct: 157 -STLKVLAAKLLNFVLPNISLGRIDSSVLSR---NKSEVDLYNSDPLICHAGVKVCFGIQ 212
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ ++ ++T+PFL + G+AD + + LL E + S DK++K+Y+G YH L
Sbjct: 213 LLNAVSRVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESSPSQDKTLKMYEGAYHVLH 272
Query: 293 QGEPDENANLVLKDMREWIDERVERYGPK 321
+ P E N VL ++ W+ R+ G +
Sbjct: 273 KELP-EVTNSVLHEINTWVSHRIAVAGAR 300
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Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain. Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Rattus norvegicus (taxid: 10116) EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|O35678|MGLL_MOUSE Monoglyceride lipase OS=Mus musculus GN=Mgll PE=1 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA ++++HG G G + ++ VFA D +GHG+S+G R + D +
Sbjct: 42 KALIFVSHGAGEHCGR-YDELAHMLKGLDMLVFAHDHVGHGQSEGERMVVSDFQVFVRDV 100
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
L ++ P D+P FL G SMGGA ++L+ + P ++G++ +PL V+
Sbjct: 101 LQHVDTIQKDYP--DVPIFLLGHSMGGAISILVAAE-RPTYFSGMVLISPL-VLANPESA 156
Query: 175 SKLHLFMYGLL-FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233
S L + LL F L + D+ ++ + + ++ + S+P +V ++
Sbjct: 157 STLKVLAAKLLNFVLPNMTLGRIDSSVLSR---NKSEVDLYNSDPLVCRAGLKVCFGIQL 213
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
++ ++T+PFL + G+AD + + LL E + S DK++K+Y+G YH L +
Sbjct: 214 LNAVARVERAMPRLTLPFLLLQGSADRLCDSKGAYLLMESSRSQDKTLKMYEGAYHVLHR 273
Query: 294 GEPDENANLVLKDMREWIDERVERYG 319
P E N VL ++ W+ R+ G
Sbjct: 274 ELP-EVTNSVLHEVNSWVSHRIAAAG 298
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Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain. Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q99685|MGLL_HUMAN Monoglyceride lipase OS=Homo sapiens GN=MGLL PE=1 SV=2 | Back alignment and function description |
|---|
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 22/272 (8%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA ++++HG G +G ++++ VFA D +GHG+S+G R + D
Sbjct: 42 KALIFVSHGAGEHSGR-YEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDV 100
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-PENMK 173
L ++ P LP FL G SMGGA +L + P + G++ +PL + PE+
Sbjct: 101 LQHVDSMQKDYP--GLPVFLLGHSMGGAIAILTAAE-RPGHFAGMVLISPLVLANPESAT 157
Query: 174 PSK------LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
K L+L + L G D+ + + NK ++ + S+P +V
Sbjct: 158 TFKVLAAKVLNLVLPNLSLGPIDS-SVLSRNK---------TEVDIYNSDPLICRAGLKV 207
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287
++ ++ K+TVPFL + G+AD + + LL E A S DK++KIY+G
Sbjct: 208 CFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGA 267
Query: 288 YHSLIQGEPDENANLVLKDMREWIDERVERYG 319
YH L + P E N V ++ W+ +R G
Sbjct: 268 YHVLHKELP-EVTNSVFHEINMWVSQRTATAG 298
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Converts monoacylglycerides to free fatty acids and glycerol. Hydrolyzes the endocannabinoid 2-arachidonoylglycerol, and thereby contributes to the regulation of endocannabinoid signaling, nociperception and perception of pain (By similarity). Regulates the levels of fatty acids that serve as signaling molecules and promote cancer cell migration, invasion and tumor growth. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q55EQ3|Y9086_DICDI Uncharacterized abhydrolase domain-containing protein DDB_G0269086 OS=Dictyostelium discoideum GN=DDB_G0269086 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 53 KVK--ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110
KVK ATV M HG G +G ++ + FA G V A D GHG S G+R + +E+
Sbjct: 24 KVKPIATVTMIHGLGEHSG-RYEHVFSRFAEQGIKVNAFDQRGHGISSGVRGHSPSLEQ- 81
Query: 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170
SL + + S D+P F++G S GG + + + + G I ++PL I
Sbjct: 82 ---SLKDIQLIA-STAETDVPHFIYGHSFGGCLALHYNLKKKDHHPAGCIVTSPL--IKP 135
Query: 171 NMKPSKLHLFMYGLLFGLADTW--AAMPDNKMVGK--AIKDPEKLKVIASNPRRYTGKPR 226
+K S + L M LL GL +W + D ++ K A+ + K + N K
Sbjct: 136 AIKVSGVKLSMGNLLGGLMPSWTISNSIDPTLISKDSAVVNEYKQDKLVHN------KIS 189
Query: 227 VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA-SSADKSIKIYD 285
+G + + + + + D + P L VH D +TCP +S+ Y++ S+ DK++K+++
Sbjct: 190 LGMAKWMLQRSEQLIDLAPQFDTPLLLVHANDDKITCPKASQQFYDRVPSTVDKTLKLWE 249
Query: 286 GMYHSLIQGE--PDENANLVLKDMREWIDERVE 316
MYH + E +E +L EWI ER+E
Sbjct: 250 NMYHE-VHNEFAKEEFVTYIL----EWIKERIE 277
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Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|P28321|MGLL_YEAST Monoglyceride lipase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJU3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 136/329 (41%), Gaps = 63/329 (19%)
Query: 17 MPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC 76
+PE +Y G + G ++ NG +V+ V + HG+G T F ++
Sbjct: 12 VPELQYENFDGAKFGYMFWPVQNGT----------NEVRGRVLLIHGFGEYTKIQF-RLM 60
Query: 77 ISFATWGYAVFAADLLGHG-----RSDGIR---CYLGDMEKVAASSLSFFKHVRDSEPYR 128
+ GY F D G G RS G+ D+E +LS K +
Sbjct: 61 DHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECK-------AK 113
Query: 129 DLPGFLFGESMGGAATMLMYFQSE-PNTWTGLIFSAPLFVI-PENM--KPSKLHLFMYGL 184
+P F++G SMGG + Q + N +G I S PL ++ P M KP+++
Sbjct: 114 GIPLFMWGHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQI------- 166
Query: 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNP--RRYTGK-----PRVGTMREIARVC 237
+A A + + LK I S+ R + G P G+ R+I
Sbjct: 167 ---IAPLLAKFLPRVRIDTGLD----LKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFM 219
Query: 238 Q-----------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286
Q YIQ NF+K P + +HG D + P S+ + SADK +K+Y G
Sbjct: 220 QRGAKLYKNENNYIQKNFAK-DKPVIIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPG 278
Query: 287 MYHSLIQGEPDENANLVLKDMREWIDERV 315
HS+ E D+ N V DM++W+D+
Sbjct: 279 ARHSIFSLETDKVFNTVFNDMKQWLDKHT 307
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Converts monoacylglycerides (MAG) to free fatty acids and glycerol. Required for efficient degradation of MAG, short-lived intermediates of glycerolipid metabolism which may also function as lipid signaling molecules. Controls inactivation of the signaling lipid N-palmitoylethanolamine (PEA). Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|O94305|MGLL_SCHPO Putative monoglyceride lipase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC5E4.05c PE=1 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADL--LGHGRSDG 99
L+T+ + + K A V HG+G + + + V+ D GH R G
Sbjct: 4 LYTKDWTDVKDKPVARVVFIHGFGEHVN-AYPEFFEALNERNIEVYTFDQRGFGHSRKGG 62
Query: 100 IR---CYLGDMEKVAASSLSF----FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ-S 151
+ C G SL F ++ +R S+ +LP FL+G SMGG + +
Sbjct: 63 PKKQGCTGG-------WSLVFPDLDYQILRASD--TELPLFLWGHSMGGGLALRYGISGT 113
Query: 152 EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211
+ G+I AP+ + +P+ L L+ + + + D+ + + I E +
Sbjct: 114 HRHKLAGVIAQAPMLRCHPDTEPNFLLRKALTLVSKVHPNF--LFDSDVQSQHITRDEAV 171
Query: 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT----------VPFLTVHGTADGV 261
+R P V ++ + Q D ++ T +P L HGT D V
Sbjct: 172 N------QRLQDDPLVSSVGSL----QVFSDMLNRGTKTIELAPQFFLPLLITHGTDDNV 221
Query: 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSL-IQGEPD 297
TC SSK YE A + DK+ + Y G YHSL I+ +P+
Sbjct: 222 TCSDSSKEFYENAGTKDKTYQSYPGFYHSLHIEKKPE 258
|
Converts monoacylglycerides (MAG) to free fatty acids and glycerol. Required for efficient degradation of MAG, short-lived intermediates of glycerolipid metabolism which may also function as lipid signaling molecules. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|O34705|PLBAC_BACSU Phospholipase YtpA OS=Bacillus subtilis (strain 168) GN=ytpA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 17/263 (6%)
Query: 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
A + + HG G ++ + + + GY V DL G G + R ++ ++
Sbjct: 11 AVIVIIHGASEYHG-RYKWLIEMWRSSGYHVVMGDLPGQGTTTRARGHIRSFQEYIDEVD 69
Query: 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
++ R DLP FL G SMGG + Q TG+I S+P + + +
Sbjct: 70 AWIDKARTF----DLPVFLLGHSMGGLVAIEWVKQQRNPRITGIILSSPCLGLQIKVNKA 125
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
L L GL + + + A ++ + ++ N Y K V RE+ +
Sbjct: 126 -LDLASKGL--NVIAPSLKVDSGLSIDMATRNEDVIEA-DQNDSLYVRKVSVRWYRELLK 181
Query: 236 VCQYIQ---DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ + F K VP L + D + T + +S +K+ + ++G+YH +
Sbjct: 182 TIESAMVPTEAFLK--VPLLVMQAGDDKLVDKTMVIKWFNGVASHNKAYREWEGLYHEIF 239
Query: 293 QGEPDENANLVLKDMREWIDERV 315
EP+ V K R + D+ +
Sbjct: 240 N-EPERED--VFKAARAFTDQYI 259
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Phospholipase involved in the biosynthesis of the antibiotic bacilysocin. It probably catalyzes the hydrolysis of the 2-sn-acyl moiety of phosphatidylglycerol to produce bacilysocin (lysophosphatidylglycerol). Is also able to catalyze the hydrolysis reaction of one acyl bond in phosphatidylcholine in vitro (actual cleavage point is unknown), resulting in lysophosphatidylcholine. Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 323 | ||||||
| 224070855 | 326 | predicted protein [Populus trichocarpa] | 0.987 | 0.978 | 0.881 | 1e-170 | |
| 224054154 | 326 | predicted protein [Populus trichocarpa] | 0.993 | 0.984 | 0.878 | 1e-169 | |
| 225442797 | 392 | PREDICTED: monoglyceride lipase-like [Vi | 0.978 | 0.806 | 0.873 | 1e-167 | |
| 147780502 | 321 | hypothetical protein VITISV_001366 [Viti | 0.978 | 0.984 | 0.870 | 1e-167 | |
| 357479505 | 326 | Monoglyceride lipase [Medicago truncatul | 0.996 | 0.987 | 0.816 | 1e-162 | |
| 297847666 | 329 | esterase/lipase/thioesterase family prot | 0.965 | 0.948 | 0.839 | 1e-161 | |
| 356548571 | 326 | PREDICTED: monoglyceride lipase-like [Gl | 0.987 | 0.978 | 0.817 | 1e-160 | |
| 15219082 | 332 | lysophospholipase 2 [Arabidopsis thalian | 0.965 | 0.939 | 0.836 | 1e-160 | |
| 326910820 | 321 | monoacylglycerol acyltransferase [Arachi | 0.962 | 0.968 | 0.837 | 1e-159 | |
| 449519338 | 325 | PREDICTED: monoglyceride lipase-like [Cu | 0.962 | 0.956 | 0.820 | 1e-155 |
| >gi|224070855|ref|XP_002303266.1| predicted protein [Populus trichocarpa] gi|222840698|gb|EEE78245.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/320 (88%), Positives = 303/320 (94%), Gaps = 1/320 (0%)
Query: 1 MPPETQT-ETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVY 59
MP E Q E PPNFWGDMPEEEYY SQGV N + +FETPNGK+FTQ FLPLD+KVKATVY
Sbjct: 1 MPSEAQQPEAPPNFWGDMPEEEYYASQGVTNTQSHFETPNGKVFTQGFLPLDKKVKATVY 60
Query: 60 MTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
MTHGYGSDTGW+FQKICI+FATWGYAVFAADLLGHGRSDG+RCY+GDMEK+AA+S+SFFK
Sbjct: 61 MTHGYGSDTGWLFQKICINFATWGYAVFAADLLGHGRSDGLRCYMGDMEKIAAASVSFFK 120
Query: 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179
HVR SEPY++LP FLFGESMGG ATMLMYFQSEP+TWTG+IFSAPLFVIPE MKPSK HL
Sbjct: 121 HVRYSEPYKNLPAFLFGESMGGLATMLMYFQSEPDTWTGVIFSAPLFVIPEPMKPSKAHL 180
Query: 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY 239
FMYGLLFG ADTWAAMPDNKMVGKAIKDPEKLK+IASNPRRYTGKPRVGTMREIARVCQY
Sbjct: 181 FMYGLLFGFADTWAAMPDNKMVGKAIKDPEKLKIIASNPRRYTGKPRVGTMREIARVCQY 240
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
IQDNFSKVTVPFLTVHGTADGVTCPTSS+LLYEKASS DKS+K+Y+GMYHSLIQGEPDEN
Sbjct: 241 IQDNFSKVTVPFLTVHGTADGVTCPTSSQLLYEKASSEDKSLKMYEGMYHSLIQGEPDEN 300
Query: 300 ANLVLKDMREWIDERVERYG 319
A+LVLKDMREWIDERVERYG
Sbjct: 301 ASLVLKDMREWIDERVERYG 320
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224054154|ref|XP_002298118.1| predicted protein [Populus trichocarpa] gi|222845376|gb|EEE82923.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/322 (87%), Positives = 299/322 (92%), Gaps = 1/322 (0%)
Query: 1 MPPETQT-ETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVY 59
M ETQ ETPPNFWGDMPEEEYY SQGV + YFETPNGKLFTQ FLPLD+KVKATVY
Sbjct: 1 MSSETQQPETPPNFWGDMPEEEYYASQGVTTTQSYFETPNGKLFTQGFLPLDKKVKATVY 60
Query: 60 MTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
MTHGYGSDTGW+FQKICISFA WGYAVFAADLLGHGRSDGIRCY+GDM+K+AA+SLSFFK
Sbjct: 61 MTHGYGSDTGWLFQKICISFANWGYAVFAADLLGHGRSDGIRCYMGDMDKIAATSLSFFK 120
Query: 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179
H R SEPY+ LP FLFGESMGG TMLMYFQSEPN WTGLIFSAPLFVIPE MKPSK+HL
Sbjct: 121 HERFSEPYKGLPAFLFGESMGGLTTMLMYFQSEPNMWTGLIFSAPLFVIPEAMKPSKVHL 180
Query: 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY 239
FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK+IASNPRRYTGKPRVGTMREIAR+CQY
Sbjct: 181 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKIIASNPRRYTGKPRVGTMREIARMCQY 240
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
IQDNFSKVT PFLTVHGTADGVTCPTSS+LL+EKASS DKS+K+Y+GMYHSLIQGEPDEN
Sbjct: 241 IQDNFSKVTAPFLTVHGTADGVTCPTSSQLLFEKASSEDKSLKMYEGMYHSLIQGEPDEN 300
Query: 300 ANLVLKDMREWIDERVERYGPK 321
ANLVLKDMR WIDERVERYG K
Sbjct: 301 ANLVLKDMRGWIDERVERYGSK 322
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442797|ref|XP_002285258.1| PREDICTED: monoglyceride lipase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 276/316 (87%), Positives = 296/316 (93%)
Query: 5 TQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGY 64
+++E NFWGDMPEEEYY SQGVRN K YF+TPNGKLFTQSFLPLD VKA+VYMTHGY
Sbjct: 74 SESEISANFWGDMPEEEYYASQGVRNTKSYFDTPNGKLFTQSFLPLDLPVKASVYMTHGY 133
Query: 65 GSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124
GSDTGW+FQKICI++ATWGYAVFAAD+LGHGRSDGIRCYLGDMEKVAA+SLSFFK VR S
Sbjct: 134 GSDTGWLFQKICINYATWGYAVFAADILGHGRSDGIRCYLGDMEKVAATSLSFFKSVRTS 193
Query: 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184
E YRDLP FLFGESMGGA TML+YFQSEP WTGLIFSAPLFV+PENMKPSK+ LF+YGL
Sbjct: 194 ESYRDLPAFLFGESMGGATTMLVYFQSEPELWTGLIFSAPLFVMPENMKPSKVRLFLYGL 253
Query: 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF 244
LFG+ADTWA MPDNKMVGKAIKDPEKLKVIASNPRRYTG PRVGTMRE+ARVCQYIQDNF
Sbjct: 254 LFGMADTWATMPDNKMVGKAIKDPEKLKVIASNPRRYTGPPRVGTMRELARVCQYIQDNF 313
Query: 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304
SKVT PFLTVHGTADGVTCPTSSKLLYEKASS DK++K+Y+GMYHSLIQGEPDENANLVL
Sbjct: 314 SKVTAPFLTVHGTADGVTCPTSSKLLYEKASSEDKALKLYEGMYHSLIQGEPDENANLVL 373
Query: 305 KDMREWIDERVERYGP 320
KDMREWIDERVERYGP
Sbjct: 374 KDMREWIDERVERYGP 389
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147780502|emb|CAN62561.1| hypothetical protein VITISV_001366 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust.
Identities = 275/316 (87%), Positives = 295/316 (93%)
Query: 5 TQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGY 64
+++E NFWGDMPEEEYY SQGVRN K YF+TPNGKLFTQSFLPLD VKA+VYMTHGY
Sbjct: 3 SESEISANFWGDMPEEEYYASQGVRNTKSYFDTPNGKLFTQSFLPLDLPVKASVYMTHGY 62
Query: 65 GSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124
GSDTGW+FQKICI++ATWGYAVFAAD+LGHGRSDGIRCYLGDMEKVAA+SLSFFK VR S
Sbjct: 63 GSDTGWLFQKICINYATWGYAVFAADILGHGRSDGIRCYLGDMEKVAATSLSFFKSVRTS 122
Query: 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184
E YRDLP FLFGESMGGA TML+YFQSEP WTGLIFSAPLFV+PENMKPSK+ LF+YGL
Sbjct: 123 ESYRDLPAFLFGESMGGATTMLVYFQSEPELWTGLIFSAPLFVMPENMKPSKVRLFLYGL 182
Query: 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF 244
LFG+ADTWA MPDNKMVGKAIKDPEKLKVIASNPRRYTG PRVGTMRE+ARVCQYIQDNF
Sbjct: 183 LFGMADTWATMPDNKMVGKAIKDPEKLKVIASNPRRYTGPPRVGTMRELARVCQYIQDNF 242
Query: 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304
SKVT PFLTVHGTADGVTCPTSSKLLYEKASS DK++K+Y+GMYHSLIQGEPDEN NLVL
Sbjct: 243 SKVTAPFLTVHGTADGVTCPTSSKLLYEKASSEDKALKLYEGMYHSLIQGEPDENXNLVL 302
Query: 305 KDMREWIDERVERYGP 320
KDMREWIDERVERYGP
Sbjct: 303 KDMREWIDERVERYGP 318
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357479505|ref|XP_003610038.1| Monoglyceride lipase [Medicago truncatula] gi|355511093|gb|AES92235.1| Monoglyceride lipase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 263/322 (81%), Positives = 294/322 (91%)
Query: 1 MPPETQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYM 60
M + ++E PPNFWG PEEEYYTSQGVRN K +FETPNGK+FTQSFLPL+ ++KATVYM
Sbjct: 1 MATQQESEIPPNFWGHTPEEEYYTSQGVRNTKSHFETPNGKIFTQSFLPLNAEIKATVYM 60
Query: 61 THGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
THGYGSDTGW+FQKICI++ATWGYAVF ADLLGHGRSDG+RCYLGDM+K+AA+SLSFF H
Sbjct: 61 THGYGSDTGWLFQKICITYATWGYAVFTADLLGHGRSDGLRCYLGDMDKIAATSLSFFLH 120
Query: 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180
VR S PY LP FLFGESMGG AT+LMYFQSEP+TWTGLIFSAPLFVIPE+MKPSK+HLF
Sbjct: 121 VRRSPPYNHLPAFLFGESMGGLATLLMYFQSEPDTWTGLIFSAPLFVIPEDMKPSKIHLF 180
Query: 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240
+YGLLFGLADTWAAMPDNKMVGKAI+DP KLK+IASNPRRYTG PRVGTMRE+ RV QY+
Sbjct: 181 VYGLLFGLADTWAAMPDNKMVGKAIRDPNKLKIIASNPRRYTGPPRVGTMRELLRVTQYV 240
Query: 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300
QDNF VTVPFLT HGTADGVTCP+SSKLLYEKA S DK++K+Y+GMYHSLIQGEPDE+A
Sbjct: 241 QDNFCNVTVPFLTAHGTADGVTCPSSSKLLYEKAESKDKTLKLYEGMYHSLIQGEPDESA 300
Query: 301 NLVLKDMREWIDERVERYGPKN 322
NLVL+DMREWIDERV RYGP N
Sbjct: 301 NLVLRDMREWIDERVRRYGPNN 322
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297847666|ref|XP_002891714.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337556|gb|EFH67973.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust.
Identities = 262/312 (83%), Positives = 289/312 (92%)
Query: 12 NFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM 71
NFWG+MPEEEYYTSQGVRN K YFETPNGKLFTQSFLPLD ++K TVYM+HGYGSDT WM
Sbjct: 18 NFWGNMPEEEYYTSQGVRNTKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGSDTSWM 77
Query: 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131
FQKIC+SF+TWGYAVFAADLLGHGRSDGIRCY+GDMEKVAA+SL+FFKHVR S+PY+DLP
Sbjct: 78 FQKICMSFSTWGYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDPYKDLP 137
Query: 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191
FLFGESMGG T+LMYFQSE +TWTGL+FSAPLFVIPE+MKPSK HLF YGLLFGLADT
Sbjct: 138 AFLFGESMGGLVTLLMYFQSEADTWTGLMFSAPLFVIPEDMKPSKAHLFAYGLLFGLADT 197
Query: 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251
WAAMPDNKMVGKAIKDPEKLK+IASNP+RYTGKPRVGTMRE+ R QY+Q+NF +VT+P
Sbjct: 198 WAAMPDNKMVGKAIKDPEKLKIIASNPQRYTGKPRVGTMRELLRKTQYVQENFGRVTIPV 257
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
T HGTADGVTCPTSSKLLYEKASSADK++KIY+GMYHSLIQGEPDENA +VLKDMREWI
Sbjct: 258 FTAHGTADGVTCPTSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLKDMREWI 317
Query: 312 DERVERYGPKNC 323
DERV+RYG K
Sbjct: 318 DERVKRYGSKTV 329
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356548571|ref|XP_003542674.1| PREDICTED: monoglyceride lipase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 265/324 (81%), Positives = 297/324 (91%), Gaps = 5/324 (1%)
Query: 1 MPPETQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLD---QKVKAT 57
M PE+ E PPNFWG PEEEYYTSQGVRN K +FETPNGK+FTQSFLPL+ +VKAT
Sbjct: 1 MAPES--EAPPNFWGHTPEEEYYTSQGVRNTKSHFETPNGKIFTQSFLPLNLQPHQVKAT 58
Query: 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117
V+MTHGYGSDTGW+FQKICI+FATWGYAVFAADLLGHGRSDG++CYLGDM+K+AA+SLSF
Sbjct: 59 VFMTHGYGSDTGWLFQKICINFATWGYAVFAADLLGHGRSDGLQCYLGDMDKIAATSLSF 118
Query: 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
F HVR+S PY++LP FLFGESMGG AT+LMYF+SEP+TWTGL+FSAPLFVIPE+MKPS++
Sbjct: 119 FLHVRNSHPYKNLPAFLFGESMGGLATLLMYFKSEPDTWTGLMFSAPLFVIPEDMKPSRV 178
Query: 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237
HLFMYGLLFGLADTWAAMPDNKMVGKAI+DPEKLKVIASNPRRYTG PRVGTMRE+ RV
Sbjct: 179 HLFMYGLLFGLADTWAAMPDNKMVGKAIRDPEKLKVIASNPRRYTGPPRVGTMRELLRVT 238
Query: 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD 297
QY+QDNFSKVT PF T HGT+DGVTCP+SSKLLYEK SS DK++K+YDGMYHSLIQGEPD
Sbjct: 239 QYVQDNFSKVTTPFFTAHGTSDGVTCPSSSKLLYEKGSSEDKTLKLYDGMYHSLIQGEPD 298
Query: 298 ENANLVLKDMREWIDERVERYGPK 321
E+ANLVL DMREWIDERV RYGP
Sbjct: 299 ESANLVLGDMREWIDERVRRYGPN 322
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219082|ref|NP_175685.1| lysophospholipase 2 [Arabidopsis thaliana] gi|12324637|gb|AAG52273.1|AC019018_10 putative lipase; 20450-21648 [Arabidopsis thaliana] gi|15450994|gb|AAK96768.1| putative lipase [Arabidopsis thaliana] gi|30984558|gb|AAP42742.1| At1g52760 [Arabidopsis thaliana] gi|332194728|gb|AEE32849.1| lysophospholipase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 261/312 (83%), Positives = 288/312 (92%)
Query: 12 NFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM 71
NFWG MPEEEYYTSQGVRN K YFETPNGKLFTQSFLPLD ++K TVYM+HGYGSDT WM
Sbjct: 21 NFWGTMPEEEYYTSQGVRNSKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGSDTSWM 80
Query: 72 FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131
FQKIC+SF++WGYAVFAADLLGHGRSDGIRCY+GDMEKVAA+SL+FFKHVR S+PY+DLP
Sbjct: 81 FQKICMSFSSWGYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDPYKDLP 140
Query: 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191
FLFGESMGG T+LMYFQSEP TWTGL+FSAPLFVIPE+MKPSK HLF YGLLFGLADT
Sbjct: 141 AFLFGESMGGLVTLLMYFQSEPETWTGLMFSAPLFVIPEDMKPSKAHLFAYGLLFGLADT 200
Query: 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251
WAAMPDNKMVGKAIKDPEKLK+IASNP+RYTGKPRVGTMRE+ R QY+Q+NF KVT+P
Sbjct: 201 WAAMPDNKMVGKAIKDPEKLKIIASNPQRYTGKPRVGTMRELLRKTQYVQENFGKVTIPV 260
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
T HGTADGVTCPTSSKLLYEKASSADK++KIY+GMYHSLIQGEPDENA +VLKDMREWI
Sbjct: 261 FTAHGTADGVTCPTSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLKDMREWI 320
Query: 312 DERVERYGPKNC 323
DE+V++YG K
Sbjct: 321 DEKVKKYGSKTA 332
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|326910820|gb|AEA11209.1| monoacylglycerol acyltransferase [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/314 (83%), Positives = 293/314 (93%), Gaps = 3/314 (0%)
Query: 11 PNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSD 67
PNFWG MPEEEYYTSQGVRN K +F+TP+GK+FTQSFLPLD +VKATV+MTHGYGSD
Sbjct: 8 PNFWGHMPEEEYYTSQGVRNTKSFFDTPHGKIFTQSFLPLDLQPNEVKATVFMTHGYGSD 67
Query: 68 TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127
TGW+FQKICI+FATWGYAVFAADLLGHGRSDG+RCYLGDM+KVA++SLSFF HVR SEPY
Sbjct: 68 TGWLFQKICINFATWGYAVFAADLLGHGRSDGLRCYLGDMDKVASASLSFFLHVRRSEPY 127
Query: 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187
+DLP FLFGESMGG AT+LMYF+SEP+TWTGL+FSAPLFVIPE+MKPS+LHLF YGLLFG
Sbjct: 128 KDLPAFLFGESMGGLATLLMYFKSEPDTWTGLMFSAPLFVIPEDMKPSRLHLFAYGLLFG 187
Query: 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247
ADTWAAMPDNKMVGKAI+DPEKLK+IASNPRRYTG PRVGTMRE+ RV QY+QDNFSKV
Sbjct: 188 WADTWAAMPDNKMVGKAIRDPEKLKIIASNPRRYTGPPRVGTMRELLRVTQYVQDNFSKV 247
Query: 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDM 307
T PFLTVHGT+DGVTCP+SSKLLYEKASS DKS+K+Y+GMYHSLIQGEPDE+ANLVL DM
Sbjct: 248 TAPFLTVHGTSDGVTCPSSSKLLYEKASSEDKSLKLYEGMYHSLIQGEPDESANLVLSDM 307
Query: 308 REWIDERVERYGPK 321
REWID+RV RYG K
Sbjct: 308 REWIDQRVHRYGNK 321
|
Source: Arachis hypogaea Species: Arachis hypogaea Genus: Arachis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449519338|ref|XP_004166692.1| PREDICTED: monoglyceride lipase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 256/312 (82%), Positives = 285/312 (91%), Gaps = 1/312 (0%)
Query: 12 NFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLD-QKVKATVYMTHGYGSDTGW 70
NFWGD PEEE+Y SQGVRN K +FET +GKLFTQSF+PLD +K TVYMTHGYGSDTGW
Sbjct: 14 NFWGDQPEEEFYASQGVRNTKSFFETSHGKLFTQSFIPLDFPDLKGTVYMTHGYGSDTGW 73
Query: 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130
MFQKIC+S+A+WGYAVFAADLLGHGRSDG+RCYLGDM+K+AA+SLSFF H R SEPYR L
Sbjct: 74 MFQKICLSYASWGYAVFAADLLGHGRSDGLRCYLGDMDKIAAASLSFFLHTRRSEPYRHL 133
Query: 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190
P FLFGESMG AATMLMY QS+P+TWTGLIFSAPLFVIPENMKPSKL LF+YGLLFG+AD
Sbjct: 134 PAFLFGESMGCAATMLMYLQSDPDTWTGLIFSAPLFVIPENMKPSKLRLFLYGLLFGVAD 193
Query: 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250
TWAAMPDNKMVGKAIKDPEKLK+IA+NPRRYTG PRVGTMRE+ RV QYI+DNFS+VT P
Sbjct: 194 TWAAMPDNKMVGKAIKDPEKLKIIAANPRRYTGPPRVGTMRELVRVTQYIRDNFSRVTAP 253
Query: 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310
FLTVHGTADGVTCP+SS+LLYEKA+S DK++K+YDGMYHSLIQGEPDEN +VL+DMREW
Sbjct: 254 FLTVHGTADGVTCPSSSELLYEKATSVDKTLKLYDGMYHSLIQGEPDENVEIVLRDMREW 313
Query: 311 IDERVERYGPKN 322
IDER RYGPK
Sbjct: 314 IDERALRYGPKK 325
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 323 | ||||||
| TAIR|locus:2011511 | 332 | LysoPL2 "lysophospholipase 2" | 0.965 | 0.939 | 0.842 | 1.2e-150 | |
| TAIR|locus:2197369 | 324 | AT1G11090 [Arabidopsis thalian | 0.956 | 0.953 | 0.414 | 4e-67 | |
| TAIR|locus:2081710 | 348 | AT3G62860 "AT3G62860" [Arabido | 0.842 | 0.781 | 0.372 | 7.4e-50 | |
| TAIR|locus:2147790 | 327 | AT5G14980 "AT5G14980" [Arabido | 0.931 | 0.920 | 0.363 | 7.4e-50 | |
| TAIR|locus:2043278 | 351 | AT2G47630 "AT2G47630" [Arabido | 0.873 | 0.803 | 0.371 | 1.1e-48 | |
| TAIR|locus:2100606 | 319 | AT3G55190 "AT3G55190" [Arabido | 0.869 | 0.880 | 0.364 | 7.7e-48 | |
| TAIR|locus:2039677 | 317 | AT2G39420 "AT2G39420" [Arabido | 0.897 | 0.914 | 0.335 | 8.8e-47 | |
| TAIR|locus:2150245 | 330 | AT5G19290 "AT5G19290" [Arabido | 0.934 | 0.915 | 0.347 | 4.4e-45 | |
| TAIR|locus:2039822 | 317 | AT2G39410 [Arabidopsis thalian | 0.907 | 0.924 | 0.317 | 5e-44 | |
| TAIR|locus:2181392 | 369 | AT5G16120 [Arabidopsis thalian | 0.876 | 0.766 | 0.333 | 2.2e-43 |
| TAIR|locus:2011511 LysoPL2 "lysophospholipase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 263/312 (84%), Positives = 290/312 (92%)
Query: 10 PPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTG 69
PPNFWG MPEEEYYTSQGVRN K YFETPNGKLFTQSFLPLD ++K TVYM+HGYGSDT
Sbjct: 19 PPNFWGTMPEEEYYTSQGVRNSKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGSDTS 78
Query: 70 WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129
WMFQKIC+SF++WGYAVFAADLLGHGRSDGIRCY+GDMEKVAA+SL+FFKHVR S+PY+D
Sbjct: 79 WMFQKICMSFSSWGYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDPYKD 138
Query: 130 LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189
LP FLFGESMGG T+LMYFQSEP TWTGL+FSAPLFVIPE+MKPSK HLF YGLLFGLA
Sbjct: 139 LPAFLFGESMGGLVTLLMYFQSEPETWTGLMFSAPLFVIPEDMKPSKAHLFAYGLLFGLA 198
Query: 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249
DTWAAMPDNKMVGKAIKDPEKLK+IASNP+RYTGKPRVGTMRE+ R QY+Q+NF KVT+
Sbjct: 199 DTWAAMPDNKMVGKAIKDPEKLKIIASNPQRYTGKPRVGTMRELLRKTQYVQENFGKVTI 258
Query: 250 PFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMRE 309
P T HGTADGVTCPTSSKLLYEKASSADK++KIY+GMYHSLIQGEPDENA +VLKDMRE
Sbjct: 259 PVFTAHGTADGVTCPTSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLKDMRE 318
Query: 310 WIDERVERYGPK 321
WIDE+V++YG K
Sbjct: 319 WIDEKVKKYGSK 330
|
|
| TAIR|locus:2197369 AT1G11090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 130/314 (41%), Positives = 194/314 (61%)
Query: 4 ETQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKV-KATVYMT 61
+ Q ET NFWG+ EE+Y+ +G+ K +F +P G LFT+S+LP + ++M
Sbjct: 3 DQQLETEINFWGETSEEDYFNLKGIIGSKSFFTSPRGLNLFTRSWLPSSSSPPRGLIFMV 62
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
HGYG+D W FQ I A G+A FA D+ GHGRSDG+R Y+ ++ V +SFF +
Sbjct: 63 HGYGNDVSWTFQSTPIFLAQMGFACFALDIEGHGRSDGVRAYVPSVDLVVDDIISFFNSI 122
Query: 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS-KLHLF 180
+ + ++ LP FLFGESMGGA +L+ F ++P + G + AP+ I + ++P + F
Sbjct: 123 KQNPKFQGLPRFLFGESMGGAICLLIQF-ADPLGFDGAVLVAPMCKISDKVRPKWPVDQF 181
Query: 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240
+ ++ TWA +P ++ K+IK EK + NP RY KPR+GT+ E+ RV Y+
Sbjct: 182 LI-MISRFLPTWAIVPTEDLLEKSIKVEEKKPIAKRNPMRYNEKPRLGTVMELLRVTDYL 240
Query: 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300
V++PF+ VHG+AD VT P S+ LYE A S DK++KIYDGM HS++ GEPD+N
Sbjct: 241 GKKLKDVSIPFIIVHGSADAVTDPEVSRELYEHAKSKDKTLKIYDGMMHSMLFGEPDDNI 300
Query: 301 NLVLKDMREWIDER 314
+V KD+ W+++R
Sbjct: 301 EIVRKDIVSWLNDR 314
|
|
| TAIR|locus:2081710 AT3G62860 "AT3G62860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 102/274 (37%), Positives = 154/274 (56%)
Query: 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI 100
+LF +LP +A V++ HGYG + ++ I A+ GYAVF D GHGRS G
Sbjct: 20 ELFACRWLP-SSSPRALVFLCHGYGMECSSFMRECGIRLASAGYAVFGMDYEGHGRSKGA 78
Query: 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160
RCY+ + ++ + E Y++ FL+GESMGGA +L++ + +P+ W G +
Sbjct: 79 RCYIKKFSNIVNDCFDYYTSISAQEEYKEKGRFLYGESMGGAVALLLH-KKDPSFWNGAL 137
Query: 161 FSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR 220
AP+ I E +KP + + + + + W +P ++ A KDP K + I +N
Sbjct: 138 LVAPMCKISEKVKPHPVVINLLTRVEDIIPKWKIVPTKDVIDAAFKDPVKREEIRNNKLI 197
Query: 221 YTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280
Y KPR+ T E+ R ++D ++T+PF +HG AD VT P SK L+EKAS+ DK+
Sbjct: 198 YQDKPRLKTALEMLRTSMDLEDTLHEITLPFFVLHGEADIVTDPEISKALFEKASTRDKT 257
Query: 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
IK+Y GM+H L GEPD N +LV D+ W+D R
Sbjct: 258 IKLYPGMWHGLTSGEPDANVDLVFADIVNWLDAR 291
|
|
| TAIR|locus:2147790 AT5G14980 "AT5G14980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 111/305 (36%), Positives = 161/305 (52%)
Query: 14 WGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF 72
+G + E+Y+ V + Y P G KLFTQ + PL++ + + HG+ ++ W
Sbjct: 15 FGSLSAAEFYSRHSVTHSSAYVTNPTGLKLFTQWWTPLNRPPLGLIAVVHGFTGESSWFL 74
Query: 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132
Q + FA GY A D GHG SDG+ ++ ++ + +SFF R LP
Sbjct: 75 QLTSVLFAKSGYLTCAIDHQGHGFSDGLTAHIPNINLIVDDCISFFDDFRKRHASSFLPA 134
Query: 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192
FL+ ES+GGA + + + + + W GLI S + I KP + L L TW
Sbjct: 135 FLYSESLGGAIALYITLRQK-HQWNGLILSGAMCSISHKFKPPWPLQHLLTLAATLIPTW 193
Query: 193 AAMPDN-KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251
+P + G + K+P K K+ +NP R GKPR T E+ RVC+ +Q+ F +V VP
Sbjct: 194 RVVPTRGSIAGVSFKEPWKRKLAYANPNRTVGKPRAATAYELVRVCEDLQNRFEEVEVPL 253
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
+ VHG D V P S + LY + SS DK+IKIY GM+H LI GE +EN +LV D+ +WI
Sbjct: 254 MIVHGRDDVVCDPASVEELYRRCSSRDKTIKIYPGMWHQLI-GESEENVDLVFGDVLDWI 312
Query: 312 DERVE 316
R E
Sbjct: 313 KTRSE 317
|
|
| TAIR|locus:2043278 AT2G47630 "AT2G47630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 106/285 (37%), Positives = 157/285 (55%)
Query: 32 KKYFETPNG-KLFTQSFLPLDQKV-KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAA 89
++Y G +LF ++P KA V++ HGYG + ++ I A+ GYAVF
Sbjct: 10 EEYVRNSRGVELFACRWIPSSSSSPKALVFLCHGYGMECSDSMKECGIRLASAGYAVFGM 69
Query: 90 DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149
D GHGRS G RCY+ V ++ + E Y D FL+GESMGGA T+L++
Sbjct: 70 DYEGHGRSMGSRCYIKKFANVVNDCYDYYTSICAQEEYMDKGRFLYGESMGGAVTLLLH- 128
Query: 150 QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
+ +P W G I AP+ I E +KP + + + + + W +P ++ A KD
Sbjct: 129 KKDPLFWNGAILVAPMCKISEKVKPHPIVINLLTRVEEIIPKWKIVPTKDVIDAAFKDLV 188
Query: 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
K + + +N Y KPR+ T E+ R ++D ++T+PF +HG AD VT P SK
Sbjct: 189 KREEVRNNKLIYQDKPRLKTALEMLRTSMNLEDTLHEITMPFFVLHGEADTVTDPEVSKA 248
Query: 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
LYEKAS+ DK++K+Y GM+H+L GEPD N +LV D+ W+D R
Sbjct: 249 LYEKASTRDKTLKLYPGMWHALTSGEPDCNVDLVFADIINWLDLR 293
|
|
| TAIR|locus:2100606 AT3G55190 "AT3G55190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 105/288 (36%), Positives = 165/288 (57%)
Query: 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90
+++ E G +L T + P++Q+ +A ++ HGY D F+ I FA G+AV +
Sbjct: 12 EEFIENSRGMQLLTCKWFPVNQEPRALIFFCHGYAIDCSTTFKDIAPKFAKEGFAVHGIE 71
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150
GHGRS G+ Y+ + + + S F + + FL GESMGGA +L++ +
Sbjct: 72 YEGHGRSSGLSVYIDNFDLLIDDVSSHFSKISEMGDNTKKKRFLMGESMGGAVVLLLH-R 130
Query: 151 SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM---PDNKMVGKAIKD 207
+P W G I AP+ I E MKPS++ + M ++ L +W ++ PD ++ AIK
Sbjct: 131 KKPEFWDGGILIAPMCKIAEEMKPSRMVISMINMVTNLIPSWKSIIHGPD--ILNSAIKL 188
Query: 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267
PEK I +NP Y G PR+ TM E+ R+ +++ ++VT+PF+ +HG D VT S
Sbjct: 189 PEKRHEIRTNPNCYNGWPRMKTMSELFRISLDLENRLNEVTMPFIVLHGEDDKVTDKGGS 248
Query: 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
KLLYE A S DK++K+Y M+HSL+ GEP EN+ +V D+ +W+ R+
Sbjct: 249 KLLYEVALSNDKTLKLYPEMWHSLLFGEPPENSEIVFNDIVQWMQTRI 296
|
|
| TAIR|locus:2039677 AT2G39420 "AT2G39420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 98/292 (33%), Positives = 160/292 (54%)
Query: 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWG 83
++ ++ + + + G KLFT ++P Q+ KA V++ HGY + G
Sbjct: 5 TENIKYEESFIKNTRGMKLFTCKWVPAKQEPKALVFICHGYAMECSITMNSTARRLVKAG 64
Query: 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA 143
+AV+ D GHG+SDG+ Y+ + + + + + + + E + FL GESMGGA
Sbjct: 65 FAVYGIDYEGHGKSDGLSAYVPNFDHLVDDVSTHYTSICEKEENKGKMRFLLGESMGGAV 124
Query: 144 TMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK 203
+L++ + +P W G + AP+ I E MKPS L + + L G+ +W +P ++
Sbjct: 125 LLLLH-RKKPQFWDGAVLVAPMCKIAEEMKPSPLVISILAKLSGVIPSWKIIPGQDIIET 183
Query: 204 AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263
A K PE K + NP Y G+PR+ T E+ RV ++ ++V++PF+ +HG D VT
Sbjct: 184 AFKQPEIRKQVRENPYCYKGRPRLKTAYELLRVSTDLEKRLNEVSLPFIVLHGEDDKVTD 243
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
S+ LYE ASS+DK+ K+Y GM+H L+ GE EN V D+ W+D++V
Sbjct: 244 KAVSRQLYEVASSSDKTFKLYPGMWHGLLYGETPENIETVFADIIGWLDKKV 295
|
|
| TAIR|locus:2150245 AT5G19290 "AT5G19290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 108/311 (34%), Positives = 161/311 (51%)
Query: 12 NFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTG 69
N +G + +E+Y V + + P G KLFTQ + PL K + + HG+ ++
Sbjct: 13 NPFGSLTADEFYAKHSVSHSSAFITNPRGLKLFTQWWSPLPPTKPIGIIAVVHGFTGESS 72
Query: 70 WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129
W Q I FA G+ A D GHG SDG+ ++ D+ V +SFF R + D
Sbjct: 73 WFLQLTSILFAKSGFITCAIDHQGHGFSDGLIAHIPDINPVVDDCISFFDDFRSRQTPSD 132
Query: 130 LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS-KLHLFMYGLLFGL 188
LP FL+ ES+GGA + + + W GLI + + I + KP L ++ ++ L
Sbjct: 133 LPCFLYSESLGGAIALYISLRQR-GVWDGLILNGAMCGISDKFKPPWPLEHLLF-VVANL 190
Query: 189 ADTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV 247
TW +P + + K+P K K+ ++PRR KPR T E+ RVC+ +Q F +V
Sbjct: 191 IPTWRVIPTRGSIPDVSFKEPWKRKLAMASPRRTVAKPRAATAYELIRVCKDLQGRFEEV 250
Query: 248 TVPFLTVHGTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKD 306
VP L VHG D V C + + L+ +A S DK+IKIY ++H +I GE +E +LV D
Sbjct: 251 EVPLLIVHGGGD-VVCDVACVEELHRRAISEDKTIKIYPELWHQMI-GESEEKVDLVYGD 308
Query: 307 MREWIDERVER 317
M W+ R ER
Sbjct: 309 MLSWLKSRAER 319
|
|
| TAIR|locus:2039822 AT2G39410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 94/296 (31%), Positives = 161/296 (54%)
Query: 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWG 83
++ ++ + + + G KLFT +LP +++ +A V++ HGYG + G
Sbjct: 5 TEDIKYEESFIKNTRGFKLFTCRWLPTNREPRALVFLCHGYGMECSITMNSTARRLVKAG 64
Query: 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA 143
+AV+ D GHG+SDG+ Y+ + +++ + + + + E + F+ GESMGGA
Sbjct: 65 FAVYGMDYEGHGKSDGLSAYISNFDRLVDDVSTHYTAICEREENKWKMRFMLGESMGGAV 124
Query: 144 TMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK 203
+L+ + P+ W G I AP+ I E MKPS + + L + W +P ++
Sbjct: 125 VLLLG-RKNPDFWDGAILVAPMCKIAEEMKPSPFVISILTKLISIIPKWKIIPSQDIIEI 183
Query: 204 AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263
+ K+PE K + NP G+PR+ T E+ R+ ++ +V++PFL +HG D VT
Sbjct: 184 SYKEPEIRKQVRENPLCSKGRPRLKTAYELLRISNDLEKRLQEVSLPFLVLHGDDDKVTD 243
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERYG 319
S+ LY+ A SADK++K+Y GM+H L+ GE EN +V D+ W+++R + YG
Sbjct: 244 KAVSQELYKVALSADKTLKLYPGMWHGLLTGETPENIEIVFADVISWLEKRSD-YG 298
|
|
| TAIR|locus:2181392 AT5G16120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 97/291 (33%), Positives = 160/291 (54%)
Query: 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYA 85
G++ + + G ++F++S+LP K +A V HGYG + F+ I A GY
Sbjct: 70 GIKTKESFEVNSRGVEIFSKSWLPEASKPRALVCFCHGYGDTCTFFFEGIARRLALSGYG 129
Query: 86 VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM 145
VFA D G G S+G+ Y+ + + + + +++ + + LP FLFG+SMGGA ++
Sbjct: 130 VFAMDYPGFGLSEGLHGYIPSFDLLVQDVIEHYSNIKANPEFSSLPSFLFGQSMGGAVSL 189
Query: 146 LMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA---MPDNKMVG 202
++ + +PN W G + AP+ I +++ P + + +L GLA+ +P +
Sbjct: 190 KIHLK-QPNAWAGAVLLAPMCKIADDLVPPPV---LKQILIGLANVLPKHKLVPQKDLAE 245
Query: 203 KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+D K + N Y+GKPR+ T E+ R Q I+ +V++P L +HG AD VT
Sbjct: 246 AGFRDIRKRDMTPYNMICYSGKPRLRTAVEMLRTTQDIEKQLQEVSLPILILHGEADTVT 305
Query: 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
P+ S+ LYEKA S DK I +Y+ YHSL++GEPD+ VL D+ W+++
Sbjct: 306 DPSVSRELYEKAKSPDKKIVLYENAYHSLLEGEPDDMILRVLSDIISWLND 356
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.1.23 | LOW CONFIDENCE prediction! |
| 3rd Layer | 4.1.2.37 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 323 | |||
| PLN02298 | 330 | PLN02298, PLN02298, hydrolase, alpha/beta fold fam | 1e-114 | |
| PLN02385 | 349 | PLN02385, PLN02385, hydrolase; alpha/beta fold fam | 1e-67 | |
| PLN02652 | 395 | PLN02652, PLN02652, hydrolase; alpha/beta fold fam | 5e-37 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 3e-33 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 2e-19 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 7e-15 | |
| pfam12146 | 80 | pfam12146, Hydrolase_4, Putative lysophospholipase | 2e-14 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 3e-12 | |
| TIGR01607 | 332 | TIGR01607, PST-A, Plasmodium subtelomeric family ( | 9e-09 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-08 | |
| COG1073 | 299 | COG1073, COG1073, Hydrolases of the alpha/beta sup | 3e-07 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 5e-07 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 1e-05 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-04 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 0.001 | |
| COG1647 | 243 | COG1647, COG1647, Esterase/lipase [General functio | 0.003 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 0.003 |
| >gnl|CDD|165939 PLN02298, PLN02298, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 332 bits (852), Expect = e-114
Identities = 134/314 (42%), Positives = 195/314 (62%), Gaps = 3/314 (0%)
Query: 4 ETQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPL-DQKVKATVYMT 61
+ TET +FWG+ PEEEYY +G++ K +F +P G LFT+S+LP +A ++M
Sbjct: 6 DHATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMV 65
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
HGYG+D W FQ I A G+A FA DL GHGRS+G+R Y+ +++ V LSFF V
Sbjct: 66 HGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSV 125
Query: 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181
+ E ++ LP FL+GESMGGA +L++ + P + G + AP+ I + ++P +
Sbjct: 126 KQREEFQGLPRFLYGESMGGAICLLIHL-ANPEGFDGAVLVAPMCKISDKIRPPWPIPQI 184
Query: 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241
+ T A +P ++ K++K P K + NP RY GKPR+GT+ E+ RV Y+
Sbjct: 185 LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLG 244
Query: 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENAN 301
V++PF+ +HG+AD VT P S+ LYE+A S DK+IKIYDGM HSL+ GEPDEN
Sbjct: 245 KKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIE 304
Query: 302 LVLKDMREWIDERV 315
+V +D+ W++ER
Sbjct: 305 IVRRDILSWLNERC 318
|
Length = 330 |
| >gnl|CDD|215216 PLN02385, PLN02385, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 1e-67
Identities = 104/282 (36%), Positives = 160/282 (56%), Gaps = 13/282 (4%)
Query: 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR 101
+F++S+LP + + KA V HGYG + F+ I A+ GY VFA D G G S+G+
Sbjct: 74 IFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH 133
Query: 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161
Y+ + + + + ++ + +R LP FLFG+SMGGA + ++ + +PN W G I
Sbjct: 134 GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLK-QPNAWDGAIL 192
Query: 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK------AIKDPEKLKVIA 215
AP+ I +++ P L L +L LA+ +P K+V + A +D +K K+
Sbjct: 193 VAPMCKIADDVVPPPLVL---QILILLAN---LLPKAKLVPQKDLAELAFRDLKKRKMAE 246
Query: 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275
N Y KPR+ T E+ R Q I+ +V++P L +HG AD VT P+ SK LYEKAS
Sbjct: 247 YNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKAS 306
Query: 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
S+DK +K+Y+ YHS+++GEPDE VL D+ W+D +
Sbjct: 307 SSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHSTQ 348
|
Length = 349 |
| >gnl|CDD|215352 PLN02652, PLN02652, hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 5e-37
Identities = 90/277 (32%), Positives = 145/277 (52%), Gaps = 14/277 (5%)
Query: 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR 101
LF +S+ P +++ + + HG +G + + G+ V+A D +GHG SDG+
Sbjct: 123 LFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH 181
Query: 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM-LMYFQSEPNTWTGLI 160
Y+ ++ V + +F + +R P +P FLFG S GGA + + S + G++
Sbjct: 182 GYVPSLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIV 239
Query: 161 FSAPLFVIPENMKPSKLHLFMYGLLFGL-ADTWAAMPDNKMVGKAIKDPEKLKVIASNPR 219
++P +KP+ + +F L A + NK +DP L S+P
Sbjct: 240 LTSPAL----RVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPL 295
Query: 220 RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADK 279
YTG RV T EI R+ Y+ NF VTVPF+ +HGTAD VT P +S+ LY +A+S K
Sbjct: 296 VYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHK 355
Query: 280 SIKIYDGMYHSLI-QGEPDENANLVLKDMREWIDERV 315
IK+YDG H L+ + E +E V +D+ +W+++R+
Sbjct: 356 DIKLYDGFLHDLLFEPEREE----VGRDIIDWMEKRL 388
|
Length = 395 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 3e-33
Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 24/313 (7%)
Query: 9 TPPNFWGDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDT 68
E + + G R L +++ + K V + HG G +
Sbjct: 1 PLNPVPRTRTEGYFTGADGTR------------LRYRTWAA-PEPPKGVVVLVHGLG-EH 46
Query: 69 GWMFQKICISFATWGYAVFAADLLGHGRS-DGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127
++++ A G+ V+A DL GHGRS G R ++ +F + + EP
Sbjct: 47 SGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIA--EPD 104
Query: 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187
LP FL G SMGG +L Y P GL+ S+P + + L LL
Sbjct: 105 PGLPVFLLGHSMGGLIALL-YLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163
Query: 188 LADTWAAMPDNKMVGKA---IKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQDN 243
+ + +DP ++ ++P G P + +
Sbjct: 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRD 223
Query: 244 FSKVTVPFLTVHGTADGVTC-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANL 302
+ +P L + G D V +E+A S DK +K+ G YH L+ EPD
Sbjct: 224 APAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLN-EPDRAREE 282
Query: 303 VLKDMREWIDERV 315
VLKD+ W+ E +
Sbjct: 283 VLKDILAWLAEAL 295
|
Length = 298 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 86.1 bits (213), Expect = 2e-19
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 37/275 (13%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA V+++HG G +G ++++ + ++ G VF+ D +GHGRS+G +
Sbjct: 25 KALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEK----------MMI 73
Query: 115 LSFFKHVRD--------SEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
F +VRD Y +P FL G SMG ++L +++ PN +T +I +PL
Sbjct: 74 DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN-PNLFTAMILMSPLV 132
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK-----AIKDPEKLKVIASNPRRY 221
+ + L + G+ + NK+VGK +D +++ +P
Sbjct: 133 NAEAVPRLNLLAAKLMGIFY----------PNKIVGKLCPESVSRDMDEVYKYQYDPLVN 182
Query: 222 TGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI 281
K + G ++ + ++ K+ P L + GT + S + + ++ ++ I
Sbjct: 183 HEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGT-NNEISDVSGAYYFMQHANCNREI 241
Query: 282 KIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316
KIY+G H L E DE V+K++ WI RV+
Sbjct: 242 KIYEGAKHHL-HKETDEVKKSVMKEIETWIFNRVK 275
|
Length = 276 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 7e-15
Identities = 49/241 (20%), Positives = 77/241 (31%), Gaps = 58/241 (24%)
Query: 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117
V + HG G ++ + + A GY V A DL GHG SDG +E AA +
Sbjct: 1 VVLLHGAGGS-AESWRPLAEALAA-GYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAAL 58
Query: 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
+ P L G S+GGA L P GL+ +P E +
Sbjct: 59 LDAL-GLGPV-----VLVGHSLGGAVA-LAAAARRPERVAGLVLISPPLRDLEEL----- 106
Query: 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237
+ L A +
Sbjct: 107 ---LAADAAALLALLRAALLD--------------------------------------- 124
Query: 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD 297
+++ +++TVP L +HG D + P +++ L E + + G H P+
Sbjct: 125 ADLREALARLTVPVLVIHGEDDPLVPPEAARRLAEA--LPGAELVVLPGAGHLPHLEHPE 182
Query: 298 E 298
E
Sbjct: 183 E 183
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|221442 pfam12146, Hydrolase_4, Putative lysophospholipase | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 2e-14
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI 100
KLF + +LP KA V + HG G +G + ++ A GYAV+A D GHGRS G
Sbjct: 3 KLFYRRWLPAGPPPKAVVVLVHGGGEHSGR-YAELAEELAAQGYAVYAYDHRGHGRSPGK 61
Query: 101 RCYLGDMEKVAASSLSFFK 119
R ++ + +F +
Sbjct: 62 RGHVPSFDDYVDDLDTFVE 80
|
This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. Length = 80 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 65.8 bits (159), Expect = 3e-12
Identities = 51/268 (19%), Positives = 79/268 (29%), Gaps = 32/268 (11%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
+ + HG+ + W + Y V A DL GHGRSD + A
Sbjct: 23 PLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAG---YSLSAYADDLA 79
Query: 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP----------- 164
+ + + L G SMGGA + + + P+ GL+ P
Sbjct: 80 ALLDALGLEKVV------LVGHSMGGAVALALALR-HPDRVRGLVLIGPAPPPGLLEAAL 132
Query: 165 ------LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV-IASN 217
+ L + L AA+ G A L A+
Sbjct: 133 RQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAA 192
Query: 218 PRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277
R + + +++TVP L +HG D V P A
Sbjct: 193 FARAARADLAAALLALLDRDLRAA--LARITVPTLIIHGEDDPVV-PAELARRLAAALPN 249
Query: 278 DKSIKIYDGMYHSLIQGEPDENANLVLK 305
D + + G H P+ A +L
Sbjct: 250 DARLVVIPGAGHFPHLEAPEAFAAALLA 277
|
Length = 282 |
| >gnl|CDD|162444 TIGR01607, PST-A, Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 9e-09
Identities = 58/266 (21%), Positives = 101/266 (37%), Gaps = 46/266 (17%)
Query: 83 GYAVFAADLLGHGRSDG---IRCYLGDMEKVAASSLSFFKHVRDS--------------- 124
GY+V+ DL GHG SDG +R ++ + + + + + DS
Sbjct: 74 GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYD 133
Query: 125 ----EPYRDLPGFLFGESMGGAATM----LMYFQSEPNT---WTGLIFSAPLFVIPENMK 173
+ R LP ++ G SMGG + L+ +E N G I + + I
Sbjct: 134 IVNTKENR-LPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGS 192
Query: 174 PSKLHLFMYGLLF-GLADTWAAMPDNKMVGKAIKDPEKLKVIAS----NPRRYTGKPRVG 228
F + + + + + + + K I+ EK + + RY G
Sbjct: 193 DDS---FKFKYFYLPVMNFMSRVFPTFRISKKIR-YEKSPYVNDIIKFDKFRYDGGITFN 248
Query: 229 TMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286
E+ + + + + +P L +H D V + Y K S ++K + +
Sbjct: 249 LASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLED 308
Query: 287 MYHSLIQGEP-DENANLVLKDMREWI 311
M H +I EP +E VLK + EWI
Sbjct: 309 MDH-VITIEPGNEE---VLKKIIEWI 330
|
This model represents a paralogous family of genes in Plasmodium falciparum and Plasmodium yoelii which are closely related to various phospholipases and lysophospholipases of plants as well as generally being related to the alpha/beta-fold superfamily of hydrolases. These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. Length = 332 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-08
Identities = 38/158 (24%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG G D + + + A+ GY V A D GHG S G D E V A
Sbjct: 1 LVVLLHGAGGDPE-AYAPLARALASRGYNVVAVDYPGHGASLGAP----DAEAVLA---- 51
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
D E L G S+GG +L+ + + A +K
Sbjct: 52 --DAPLDPERI-----VLVGHSLGGGVALLLA--ARDPRVKAAVVLAAGDPPDALDDLAK 102
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214
L + + ++ G D + + + A+ P +L VI
Sbjct: 103 LTVPVL-IIHGTRDGVVPPEEAEALAAALPGPAELVVI 139
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|223999 COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 3e-07
Identities = 35/294 (11%), Positives = 65/294 (22%), Gaps = 52/294 (17%)
Query: 22 YYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFAT 81
+ + + + + + G G+
Sbjct: 55 LHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLL 114
Query: 82 WGYAVFAADLLGHGRSDGIRCYLGDMEKV-AASSLSFFKHVRDSEPYRDLPGFLFGESMG 140
V D G S G + + S+ + + ++GES+G
Sbjct: 115 LSEGVLDKDYRLLGASLG--PRILAGLSLGGPSAGALLAWGPTRLDASRIV--VWGESLG 170
Query: 141 GAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200
GA +L+ A + L
Sbjct: 171 GALALLL--------LGANPELARELIDYLITPGGFAPLPA------------------- 203
Query: 201 VGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260
L + +I+ P L VHG D
Sbjct: 204 ------PEAPLDTLPLRAVLLLLLDPFDDAEKISP-------------RPVLLVHGERDE 244
Query: 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
V ++ LYE A K + G H + + L + E+++
Sbjct: 245 VVPLRDAEDLYEAARERPKKLLFVPGGGHIDL-YDNPPAVEQALDKLAEFLERH 297
|
Length = 299 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 5e-07
Identities = 50/237 (21%), Positives = 72/237 (30%), Gaps = 26/237 (10%)
Query: 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA 143
+ V A DL G GRS + + + + D+ + L G SMGG
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADY---RFDDLAEDLEALLDALGLDKV--NLVGHSMGG-L 54
Query: 144 TMLMYFQSEP---------NTWTGLIFSAPLFVIPENMKPS---KLHLFMYG---LLFGL 188
L Y P T S+P N+ +Y L G
Sbjct: 55 IALAYAAKYPDRVKALVLVGTVHPAGLSSP-LTPRGNLLGLLLDNFFNRLYDSVEALLGR 113
Query: 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT 248
A V +K E L + +G V +
Sbjct: 114 AIKQFQALGRPFVSDFLKQFE-LSSLIRFGETLALDGLLGYALGYDLVWDRSAAL-KDID 171
Query: 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLK 305
VP L + G D + P +S+ L +A + D H +PDE A L+LK
Sbjct: 172 VPTLIIWGDDDPLVPPDASEKLAALFPNAQL--VVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 56 ATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
V + HG+G D W+F + G V A DL GHG S G ++++AA+
Sbjct: 132 TPVVLIHGFGGDLNNWLFN---HAALAAGRPVIALDLPGHGAS-SKAVGAGSLDELAAAV 187
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATM 145
L+F + E L G SMGGA +
Sbjct: 188 LAFLDAL-GIE-----RAHLVGHSMGGAVAL 212
|
Length = 371 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290
D+ +K+TVP L +HGT DGV P ++ L + + +G HS
Sbjct: 98 DDLAKLTVPVLIIHGTRDGVVPPEEAEALAAAL-PGPAELVVIEGAGHS 145
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 55 KATVYMTHGY-GSDTGWMFQKICISFATWGYAVFAADLLGHGRS---DGIRCYLGDMEKV 110
K + HG+ GS W Q + I + A DL GHG S I Y D E++
Sbjct: 2 KPVLVFLHGFLGSGADW--QAL-IELLGPHFRCLAIDLPGHGSSQSPSDIERY--DFEEI 56
Query: 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGG 141
A L+ EP+ FL G SMGG
Sbjct: 57 AQLLLATLLDQLGIEPF-----FLVGYSMGG 82
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|224561 COG1647, COG1647, Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDEN 299
+ + K+ P L V G D + S+ +Y+ S DK +K +G H + D+
Sbjct: 173 ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL---DKE 229
Query: 300 ANLVLKDMREWID 312
+ V +D+ +++
Sbjct: 230 RDQVEEDVITFLE 242
|
Length = 243 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.003
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 57 TVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
V + HG+G+ W + I Y V+A DLLG G SD + ME A L
Sbjct: 90 PVLLVHGFGASIPHW---RRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146
Query: 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160
F + V P L G S+G A ++ +S + GL+
Sbjct: 147 DFLEEVVQK------PTVLIGNSVGSLACVIAASESTRDLVRGLV 185
|
Length = 360 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 323 | |||
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 100.0 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.98 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.98 | |
| PLN02578 | 354 | hydrolase | 99.98 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.97 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.95 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.95 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.95 | |
| PRK10566 | 249 | esterase; Provisional | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.94 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.93 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.93 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.93 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.93 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.92 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.91 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.91 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.91 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.91 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.91 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.9 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.9 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.9 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.9 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.9 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.9 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.89 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.88 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.88 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.88 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.88 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.87 | |
| PLN00021 | 313 | chlorophyllase | 99.87 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.86 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.86 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.85 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.84 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.84 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.84 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.82 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.82 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.82 | |
| PRK10115 | 686 | protease 2; Provisional | 99.81 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.8 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.79 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.78 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.78 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.78 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.77 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.77 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.76 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.76 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.76 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.72 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.71 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.71 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.7 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.7 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.68 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.68 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.67 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.66 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.65 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.64 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.63 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.63 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.63 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.63 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.62 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.6 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.6 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.59 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.57 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.56 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.56 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.55 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.53 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.52 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.51 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.51 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.5 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.49 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.49 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.49 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.47 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.47 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.46 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.45 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.4 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.4 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.37 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.35 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.34 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.33 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.32 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.31 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.28 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.28 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.25 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 99.22 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.22 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 99.21 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.15 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 99.12 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.1 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 99.09 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.08 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.07 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.04 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.99 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.98 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.97 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.93 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.9 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.89 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.88 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.86 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.85 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.84 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.81 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.74 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.73 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.72 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.69 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.68 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.68 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.67 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.66 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.65 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.63 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.61 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.6 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.59 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 98.54 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.53 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.49 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.47 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.45 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.45 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.42 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.38 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 98.28 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.27 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.2 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 98.19 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 98.16 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.16 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 98.16 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.12 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 98.09 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.08 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 98.07 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.85 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.83 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.81 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.79 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.7 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.63 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.55 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.54 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 97.47 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.38 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.32 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.29 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 97.2 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 97.18 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.92 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 96.76 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.59 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 96.55 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.52 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.47 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.3 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 96.27 | |
| PLN02408 | 365 | phospholipase A1 | 96.23 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.21 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.17 | |
| PLN02847 | 633 | triacylglycerol lipase | 96.12 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 96.11 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 96.04 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.95 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.95 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 95.92 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.83 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.71 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 95.66 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 95.66 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.55 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 95.45 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.31 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.24 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.99 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 94.74 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 94.49 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 94.25 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 94.18 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 93.82 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 91.93 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 90.36 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 90.04 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 89.99 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 89.46 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 88.51 | |
| COG3673 | 423 | Uncharacterized conserved protein [Function unknow | 83.34 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 82.61 |
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=282.15 Aligned_cols=306 Identities=45% Similarity=0.820 Sum_probs=285.9
Q ss_pred CCCCCCCCCCCccccccccCcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHhhCCcE
Q 020633 8 ETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFATWGYA 85 (323)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~ 85 (323)
...+.+|......+++...++.....++++.+| +|.+..|.|.++ +++..|+++||++.++.+.|+.++..|+..||.
T Consensus 5 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~ 84 (313)
T KOG1455|consen 5 ANRRSLAGELSEEEYYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFA 84 (313)
T ss_pred ccCcccccccchhhhcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCe
Confidence 345667888888888888888889999999999 999999999653 788999999999999888999999999999999
Q ss_pred EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 86 VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 86 v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
|+++|++|||.|++...+..+++..++|+...++.+..+....+.+..++||||||.+++.++.++|+. .+++|+++|.
T Consensus 85 v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~-w~G~ilvaPm 163 (313)
T KOG1455|consen 85 VYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF-WDGAILVAPM 163 (313)
T ss_pred EEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc-cccceeeecc
Confidence 999999999999999999999999999999999998777665678999999999999999999999998 9999999999
Q ss_pred ccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC
Q 020633 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
+...+...+.+....+...+..+.+.|...+.+......++++..+.....++..+...+++....++++...++...+.
T Consensus 164 c~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~ 243 (313)
T KOG1455|consen 164 CKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLN 243 (313)
T ss_pred cccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998888888889999999999999999999999999999999999999999999
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|.+++||++|.++.++.++.+++...+.++++++|||+-|.++..+++++.+.+...|.+||+++
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998899999999999999998789999999999999999876
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-45 Score=293.21 Aligned_cols=316 Identities=42% Similarity=0.811 Sum_probs=235.0
Q ss_pred CCCCC--CCCCCCCCCCCCCccccccccCcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHH
Q 020633 1 MPPET--QTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKIC 76 (323)
Q Consensus 1 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~ 76 (323)
|+-.+ ++++...||...+..+++...++..+..++...|| +|+|+.|.+.+. .++++|||+||++.+..|.|..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~ 80 (330)
T PLN02298 1 MEDMSDHATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA 80 (330)
T ss_pred CCCcCCCCCCCCccccccCCHHHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH
Confidence 44444 67888999999999999999999999999999999 999999987642 467899999999876665778888
Q ss_pred HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCce
Q 020633 77 ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTW 156 (323)
Q Consensus 77 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v 156 (323)
..|+++||+|+++|+||||.|.+......+++.+++|+.++++.+......+..+++|+||||||.+++.++.++|++ |
T Consensus 81 ~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~-v 159 (330)
T PLN02298 81 IFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEG-F 159 (330)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccc-c
Confidence 889989999999999999999865544458899999999999999865322245799999999999999999999998 9
Q ss_pred eEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH
Q 020633 157 TGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236 (323)
Q Consensus 157 ~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++|+++|...........+........+..+.+..........................++..+...........+...
T Consensus 160 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (330)
T PLN02298 160 DGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRV 239 (330)
T ss_pred eeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHH
Confidence 99999998765443322222222222222222222211111111111112222222233334334433344444455544
Q ss_pred HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.....+.++++|+|+++|++|.++|++.++.+++.+..++++++++++++|.+++++|+...+++.+.|.+||.+++.
T Consensus 240 ~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 240 TDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 44456778899999999999999999999999998888656789999999999999999988888999999999999875
Q ss_pred h
Q 020633 317 R 317 (323)
Q Consensus 317 ~ 317 (323)
.
T Consensus 320 ~ 320 (330)
T PLN02298 320 G 320 (330)
T ss_pred C
Confidence 4
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=278.75 Aligned_cols=289 Identities=36% Similarity=0.659 Sum_probs=207.4
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+...++.++.+.+| +|++..|+|.+..++++|||+||++++....|..++..|+++||+|+++|+||||.|++......
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 137 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIP 137 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcC
Confidence 45566677888899 99999999875467899999999998766457889999998899999999999999987655445
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+++++++|+.++++.+.........+++|+||||||.+++.++.++|++ ++++|+++|....................+
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~-v~glVLi~p~~~~~~~~~~~~~~~~~~~~~ 216 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNA-WDGAILVAPMCKIADDVVPPPLVLQILILL 216 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcch-hhheeEecccccccccccCchHHHHHHHHH
Confidence 8899999999999998764322245799999999999999999999999 999999998765433222222222222222
Q ss_pred hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
....+..............+.+.........+...+...........+..........+.++++|+|+|+|++|.++|++
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~ 296 (349)
T PLN02385 217 ANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPS 296 (349)
T ss_pred HHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChH
Confidence 22222111111111111112222221222222222222223333444444444456778899999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.++.+++.+..+++++++++++||.++.++|++..+++.+.|.+||+++..
T Consensus 297 ~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 297 VSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 999999988656789999999999999899988888899999999998864
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=241.22 Aligned_cols=267 Identities=22% Similarity=0.433 Sum_probs=187.0
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++...|| +|+|..|.|.. .+++.|+++||+++++. .|..+++.|+++||+|+++|+||||.|++......++..+++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 4667799 99999998864 66788888899998877 899999999999999999999999999765433346777888
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh-hhcc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG-LADT 191 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 191 (323)
|+.+.++.+....+ ..+++|+||||||.+|+.++.++|+. ++++|+++|....... .....+...... ..+.
T Consensus 82 d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~-i~~lil~~p~~~~~~~----~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 82 DVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNPNL-FTAMILMSPLVNAEAV----PRLNLLAAKLMGIFYPN 154 (276)
T ss_pred HHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCccc-cceEEEeccccccccc----cHHHHHHHHHHHHhCCC
Confidence 88888887765433 45899999999999999999999998 9999999986542211 001111111111 0110
Q ss_pred cccCCcccccccc-cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 192 WAAMPDNKMVGKA-IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 192 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
... ....... ..+.........++..........+..............+.++++|+|+|+|++|.++|++.++.+
T Consensus 155 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 155 KIV---GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred Ccc---CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHH
Confidence 000 0000011 111111111222222222222233333444334445677889999999999999999999999999
Q ss_pred HHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 271 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+. +++++++++++||.++.|.+ +..+++.+.+.+||+++
T Consensus 232 ~~~~~-~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 232 MQHAN-CNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHcc-CCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 88874 36899999999999997655 56888999999999986
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-37 Score=237.47 Aligned_cols=282 Identities=26% Similarity=0.450 Sum_probs=223.7
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC-CCcccCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~~ 106 (323)
...+..+...|| .++|..|.+.. .++.+||++||++.+.. .|..++..|..+||.|+++|+||||.|. +......+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 445677888899 99999999876 44589999999999888 8999999999999999999999999998 67777778
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++.+|+..+++.+....+ ..+++++||||||.+++.++.+++.. ++++|+.+|....................+.
T Consensus 86 f~~~~~dl~~~~~~~~~~~~--~~p~~l~gHSmGg~Ia~~~~~~~~~~-i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~ 162 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDP--GLPVFLLGHSMGGLIALLYLARYPPR-IDGLVLSSPALGLGGAILRLILARLALKLLG 162 (298)
T ss_pred HHHHHHHHHHHHHHHhccCC--CCCeEEEEeCcHHHHHHHHHHhCCcc-ccEEEEECccccCChhHHHHHHHHHhccccc
Confidence 99999999999999987644 67999999999999999999999987 9999999999887641111112222333333
Q ss_pred hhhcccccCC---cccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH-HHHhcCCCCCcCEEEEeeCCCccc
Q 020633 187 GLADTWAAMP---DNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-YIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.+.+.+.... .........+++.....+..++..........+......... ........+++|+|+++|++|.++
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv 242 (298)
T COG2267 163 RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVV 242 (298)
T ss_pred ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccc
Confidence 3433333332 122234445677888889999987777777777777766655 334446778999999999999999
Q ss_pred C-chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 C-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ .+...++.+.+..+++++++++|+.|..+. +++...+++.+.+.+|+.+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~-E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 243 DNVEGLARFFERAGSPDKELKVIPGAYHELLN-EPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred cCcHHHHHHHHhcCCCCceEEecCCcchhhhc-CcchHHHHHHHHHHHHHHhhcc
Confidence 9 788888999888888999999999999994 4444458999999999998764
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=240.82 Aligned_cols=279 Identities=31% Similarity=0.552 Sum_probs=195.4
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+.......+...++ .+++..|.|..++++++||++||++++.. .|..+++.|+++||+|+++|+||||.|++......
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 185 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVP 185 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCc
Confidence 33345566777888 99999999965467889999999998766 78999999999999999999999999987655556
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
+++.+++|+.++++.+..+.+ ..+++++||||||.+++.++. +|+ . ++++|+.+|......... ......
T Consensus 186 ~~~~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p~~~~~-v~glVL~sP~l~~~~~~~---~~~~~~ 258 (395)
T PLN02652 186 SLDYVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YPSIEDK-LEGIVLTSPALRVKPAHP---IVGAVA 258 (395)
T ss_pred CHHHHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-ccCcccc-cceEEEECcccccccchH---HHHHHH
Confidence 888999999999999987653 458999999999999998764 553 5 999999998765432211 111111
Q ss_pred hhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.......+.+..............+.........++..+...........+..........+.++++|+|+++|++|.++
T Consensus 259 ~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vv 338 (395)
T PLN02652 259 PIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVT 338 (395)
T ss_pred HHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCC
Confidence 11122222221111110000111222222222223333222222333333333334456778899999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|++.++.+++.+.+.+++++++++++|..+++ ...+++.+.+.+||.+++.
T Consensus 339 p~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 339 DPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 99999999998765668999999999999853 2467799999999999875
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=232.62 Aligned_cols=276 Identities=16% Similarity=0.227 Sum_probs=187.2
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-----ccC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-----CYL 104 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~~ 104 (323)
++.++...+| +++|..+++. .++++||++||++++.. .|..++..|+++||+|+++|+||||.|+... ...
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 5567777889 9999999875 34679999999998777 7888998898999999999999999997432 122
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+++++++|+.++++.+....+ ..+++++||||||.+++.++.++|+. ++++|+++|......... ......+...
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~--~~~~~l~GhSmGG~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~-~~~~~~~~~~ 183 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGP--YRKRYALAHSMGGAILTLFLQRHPGV-FDAIALCAPMFGIVLPLP-SWMARRILNW 183 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCC--CCCeEEEEEcHHHHHHHHHHHhCCCC-cceEEEECchhccCCCCC-cHHHHHHHHH
Confidence 4789999999999998755432 45899999999999999999999998 999999998765432221 1111111111
Q ss_pred hhhh---hcccccC----Cccccccc-ccCChH----HHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 185 LFGL---ADTWAAM----PDNKMVGK-AIKDPE----KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 185 ~~~~---~~~~~~~----~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.... ....... ........ ...... ....+..++..........+..........+...+.++++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 263 (330)
T PRK10749 184 AEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLL 263 (330)
T ss_pred HHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEE
Confidence 1100 0000000 00000000 011111 1122233332211122333444443333334566788999999
Q ss_pred EEeeCCCcccCchhHHHHHHHcC-----CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKAS-----SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|+|++|.+++++.++.+++.+. .+++++++++++||.++.|.+. ..+++.+.|.+||+++
T Consensus 264 ii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 264 LLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-MRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-HHHHHHHHHHHHHhhc
Confidence 99999999999999888888763 1456899999999999966553 4678999999999865
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=228.89 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=165.5
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc------ccCCChHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR------CYLGDMEKV 110 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~~~~~~ 110 (323)
.+| +++|...|++ +++|||+||+++++. .|..+++.|+++ |+|+++|+||||.|+... ...++++++
T Consensus 15 ~~~~~i~y~~~G~~----~~~vlllHG~~~~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~ 88 (294)
T PLN02824 15 WKGYNIRYQRAGTS----GPALVLVHGFGGNAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETW 88 (294)
T ss_pred EcCeEEEEEEcCCC----CCeEEEECCCCCChh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHH
Confidence 367 9998887643 479999999999888 899999999887 899999999999998543 124689999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC-chhh---HHHHHhhhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM-KPSK---LHLFMYGLLF 186 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~-~~~~---~~~~~~~~~~ 186 (323)
++|+.++++.+..+ +++++||||||.+++.+|.++|++ |+++|++++........ .... ....+...+.
T Consensus 89 a~~l~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
T PLN02824 89 GEQLNDFCSDVVGD------PAFVICNSVGGVVGLQAAVDAPEL-VRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLR 161 (294)
T ss_pred HHHHHHHHHHhcCC------CeEEEEeCHHHHHHHHHHHhChhh-eeEEEEECCCcccccccccchhhhHHHHHHHHHHh
Confidence 99999999998743 899999999999999999999999 99999999754221110 0000 0000111000
Q ss_pred hhh--ccc-ccCCc----cccccccc-----CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEE
Q 020633 187 GLA--DTW-AAMPD----NKMVGKAI-----KDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFL 252 (323)
Q Consensus 187 ~~~--~~~-~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l 252 (323)
... ..+ ..... ...+...+ ........+... ............+.... ......+.++++|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 238 (294)
T PLN02824 162 ETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRP---GLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVL 238 (294)
T ss_pred chhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhc---cCCchHHHHHHHHhccccccchHHHHhhcCCCeE
Confidence 000 000 00000 00000000 001111111100 00000011111111000 012345678899999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|+|++|.+++.+.++.+.+.. ++.++++++++||++++++|++ +.+.|.+|+++
T Consensus 239 vi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (294)
T PLN02824 239 IAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPEL----VNPLIESFVAR 293 (294)
T ss_pred EEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHH----HHHHHHHHHhc
Confidence 9999999999999888877765 6689999999999999777666 99999999975
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=225.97 Aligned_cols=253 Identities=16% Similarity=0.127 Sum_probs=159.7
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhhcHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~ 119 (323)
+|+|...+.++ +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... ..++++++++|+.++++
T Consensus 35 ~i~y~~~G~~~---~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~ 110 (302)
T PRK00870 35 RMHYVDEGPAD---GPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFE 110 (302)
T ss_pred EEEEEecCCCC---CCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 57777766532 579999999998877 89999999987899999999999999975432 23588999999999999
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccC-Ccc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM-PDN 198 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 198 (323)
++..+ +++++||||||.+++.++.++|++ |+++|++++........... ........... .+..... ...
T Consensus 111 ~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~ 181 (302)
T PRK00870 111 QLDLT------DVTLVCQDWGGLIGLRLAAEHPDR-FARLVVANTGLPTGDGPMPD-AFWAWRAFSQY-SPVLPVGRLVN 181 (302)
T ss_pred HcCCC------CEEEEEEChHHHHHHHHHHhChhh-eeEEEEeCCCCCCccccchH-HHhhhhccccc-CchhhHHHHhh
Confidence 88643 899999999999999999999999 99999998743221110000 00000000000 0000000 000
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHH---------HHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR---------EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
........ ......+................. ............+.++++|+++|+|++|.++|.+. +.
T Consensus 182 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~ 259 (302)
T PRK00870 182 GGTVRDLS-DAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI 259 (302)
T ss_pred ccccccCC-HHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH
Confidence 00000000 001111100000000000000000 00001111234567899999999999999999766 77
Q ss_pred HHHHcCCCCcc---EEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 270 LYEKASSADKS---IKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 270 ~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+ ++.+ +.+++++||++++++|++ +.+.|.+|++++
T Consensus 260 ~~~~~--~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~l~~fl~~~ 301 (302)
T PRK00870 260 LQKRI--PGAAGQPHPTIKGAGHFLQEDSGEE----LAEAVLEFIRAT 301 (302)
T ss_pred HHhhc--ccccccceeeecCCCccchhhChHH----HHHHHHHHHhcC
Confidence 88877 4444 889999999999777765 899999999764
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=223.81 Aligned_cols=257 Identities=17% Similarity=0.135 Sum_probs=167.8
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +++|...+.+ ..+++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|+.+.. .++++.+++|+.+
T Consensus 9 ~~~~~~~~~~~~~~--~~~~plvllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~~ 83 (276)
T TIGR02240 9 LDGQSIRTAVRPGK--EGLTPLLIFNGIGANLE-LVFPFIEALDPD-LEVIAFDVPGVGGSSTPRH-PYRFPGLAKLAAR 83 (276)
T ss_pred cCCcEEEEEEecCC--CCCCcEEEEeCCCcchH-HHHHHHHHhccC-ceEEEECCCCCCCCCCCCC-cCcHHHHHHHHHH
Confidence 466 9999776422 22579999999999888 899999999765 9999999999999975433 3589999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh-cccccC
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA-DTWAAM 195 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 195 (323)
+++++..+ +++|+||||||.+++.+|.++|++ |+++|++++................... ..... ......
T Consensus 84 ~i~~l~~~------~~~LvG~S~GG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 155 (276)
T TIGR02240 84 MLDYLDYG------QVNAIGVSWGGALAQQFAHDYPER-CKKLILAATAAGAVMVPGKPKVLMMMAS-PRRYIQPSHGIH 155 (276)
T ss_pred HHHHhCcC------ceEEEEECHHHHHHHHHHHHCHHH-hhheEEeccCCccccCCCchhHHHHhcC-chhhhccccccc
Confidence 99998644 799999999999999999999998 9999999987643211111100000000 00000 000000
Q ss_pred Cccccccccc-CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 196 PDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 196 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.......... .++.......... ................ ......+.++++|+|+|+|++|+++|++.++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~ 232 (276)
T TIGR02240 156 IAPDIYGGAFRRDPELAMAHASKV---RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWR 232 (276)
T ss_pred hhhhhccceeeccchhhhhhhhhc---ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHh
Confidence 0000000000 0111110100000 0001111111111111 112345788999999999999999999999999998
Q ss_pred cCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+ ++.+++++++ ||+.++++|++ +.+.|.+|+++.-..
T Consensus 233 ~--~~~~~~~i~~-gH~~~~e~p~~----~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 233 I--PNAELHIIDD-GHLFLITRAEA----VAPIIMKFLAEERQR 269 (276)
T ss_pred C--CCCEEEEEcC-CCchhhccHHH----HHHHHHHHHHHhhhh
Confidence 8 7889999985 99999776655 999999999876543
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=221.94 Aligned_cols=259 Identities=13% Similarity=0.121 Sum_probs=165.3
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +++|..++. +++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+.. .++++.+++|+.
T Consensus 13 ~~~g~~i~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~ 84 (295)
T PRK03592 13 EVLGSRMAYIETGE-----GDPIVFLHGNPTSSY-LWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLD 84 (295)
T ss_pred EECCEEEEEEEeCC-----CCEEEEECCCCCCHH-HHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 3477 999998873 469999999998877 899999999888 6999999999999986543 358999999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh--cccc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA--DTWA 193 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 193 (323)
++++++..+ +++++||||||.+|+.++.++|++ |+++|++++....................+.... ....
T Consensus 85 ~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 85 AWFDALGLD------DVVLVGHDWGSALGFDWAARHPDR-VRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHhCCC------CeEEEEECHHHHHHHHHHHhChhh-eeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 999998754 899999999999999999999999 9999999984332111000000011111110000 0000
Q ss_pred c---CCccccccc----ccCChHHHHHHhcCCCCcCCCCchhH---------HHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 194 A---MPDNKMVGK----AIKDPEKLKVIASNPRRYTGKPRVGT---------MREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 194 ~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
. ......... .........................+ .........+....+.++++|+|+|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred cchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 0 000000000 01111111111000000000000000 0011111122345577899999999999
Q ss_pred CCcccCchhHHHHH-HHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 258 ADGVTCPTSSKLLY-EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 258 ~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|.++++....++. +.+ ++.++++++++||++++++|++ +.+.|.+|+++...
T Consensus 238 ~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~fl~~~~~ 291 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWP--NQLEITVFGAGLHFAQEDSPEE----IGAAIAAWLRRLRL 291 (295)
T ss_pred CCcccCcHHHHHHHHHhh--hhcceeeccCcchhhhhcCHHH----HHHHHHHHHHHhcc
Confidence 99999665555554 445 6789999999999999776665 99999999987653
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=221.37 Aligned_cols=268 Identities=23% Similarity=0.349 Sum_probs=193.7
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH-------------------------HHHHHHHhhCCcEEEE
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-------------------------QKICISFATWGYAVFA 88 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-------------------------~~~~~~l~~~g~~v~~ 88 (323)
+.+.|| +|+++.|.+. +++.+|+++||++.+..+.| ..+++.|.++||.|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 456789 9999999885 56889999999998875221 4679999999999999
Q ss_pred ecCCCCcCCCCC---cccCCChHHHhhcHHHHHHHHHhc-------------------CCCCCCCeEEEEechhHHHHHH
Q 020633 89 ADLLGHGRSDGI---RCYLGDMEKVAASSLSFFKHVRDS-------------------EPYRDLPGFLFGESMGGAATML 146 (323)
Q Consensus 89 ~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~-------------------~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
+|+||||.|.+. .....+++++++|+..+++.+... ++ ...+++++||||||.+++.
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKE-NRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccccc-CCCceeEeeccCccHHHHH
Confidence 999999999854 233347999999999999987652 11 1458999999999999999
Q ss_pred HhhhcCC-------CceeEEEEccCcccCCCCC-----chhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 147 MYFQSEP-------NTWTGLIFSAPLFVIPENM-----KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 147 ~a~~~p~-------~~v~~~vl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
++..++. ..++++|+++|........ ........+...+..+.+...... ......++...+..
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----KIRYEKSPYVNDII 234 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----ccccccChhhhhHH
Confidence 8876542 1389999988876542211 011112222222333333222111 01223445566667
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC--CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
..++..+.......+...+..........+..+ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|.++
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~ 314 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVIT 314 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCc
Confidence 777777666667778788777766555556666 799999999999999999999998887666789999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHH
Q 020633 293 QGEPDENANLVLKDMREWID 312 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+. ..+++.+.|.+||+
T Consensus 315 ~E~---~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 315 IEP---GNEEVLKKIIEWIS 331 (332)
T ss_pred cCC---CHHHHHHHHHHHhh
Confidence 542 35779999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=207.65 Aligned_cols=270 Identities=19% Similarity=0.179 Sum_probs=178.0
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLG 105 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~ 105 (323)
...-++.+.+.+| ++++..-++++ +|.|+++||++.... .|+.....|+.+||+|+++|+||+|.|+.+.. ..+
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~---gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Y 94 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGD---GPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEY 94 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCC---CCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCccee
Confidence 3445677888889 89988887765 899999999997766 89999999999999999999999999997765 677
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh---------
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK--------- 176 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~--------- 176 (323)
++..++.|+..+++++..+ +++++||+||+.+|+.+|..+|++ |+++|+++.....+.......
T Consensus 95 t~~~l~~di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~Per-v~~lv~~nv~~~~p~~~~~~~~~~~f~~~~ 167 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFYPER-VDGLVTLNVPFPNPKLKPLDSSKAIFGKSY 167 (322)
T ss_pred eHHHHHHHHHHHHHHhccc------eeEEEeccchhHHHHHHHHhChhh-cceEEEecCCCCCcccchhhhhccccCccc
Confidence 9999999999999999954 899999999999999999999999 999999887655111110000
Q ss_pred ---------HHHH-Hhh-----hhhhh----hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH
Q 020633 177 ---------LHLF-MYG-----LLFGL----ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237 (323)
Q Consensus 177 ---------~~~~-~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (323)
.... +.. ....+ .+.....+...-...........+.+......-.-.......+.+.+..
T Consensus 168 y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w 247 (322)
T KOG4178|consen 168 YICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNW 247 (322)
T ss_pred eeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCc
Confidence 0000 000 00000 0000000000000000000111111111111111112223333333333
Q ss_pred HHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcCCCCc-cEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASSADK-SIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 238 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.....+.++++|+++|+|+.|.+.+... ...+.+.+ ++. +.++++++||+...|+|++ +++.|.+|+++.
T Consensus 248 ~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v--p~l~~~vv~~~~gH~vqqe~p~~----v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 248 EAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV--PRLTERVVIEGIGHFVQQEKPQE----VNQAILGFINSF 320 (322)
T ss_pred hhccccccccccceEEEEecCcccccchhHHHHHHHhh--ccccceEEecCCcccccccCHHH----HHHHHHHHHHhh
Confidence 22244567889999999999999988763 33333444 333 7889999999999777766 999999999864
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=218.47 Aligned_cols=242 Identities=14% Similarity=0.146 Sum_probs=155.5
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
...|||+||++.+.. .|..+++.|.+.||+|+++|+||||.|+......++++++++|+.++++.+... .++++
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-----~~~~l 76 (255)
T PLN02965 3 EIHFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-----HKVIL 76 (255)
T ss_pred ceEEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-----CCEEE
Confidence 346999999998766 899999999878899999999999999755444468999999999999987531 37999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc-ccCCcccccccccCChHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW-AAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 213 (323)
+||||||.+++.++.++|++ |+++|++++............ ............... .....................
T Consensus 77 vGhSmGG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDK-ISMAIYVAAAMVKPGSIISPR-LKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHY 154 (255)
T ss_pred EecCcchHHHHHHHHhCchh-eeEEEEEccccCCCCCCccHH-HHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHH
Confidence 99999999999999999999 999999987532221110000 000000000000000 000000000000000000000
Q ss_pred HhcCCC--------CcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEec
Q 020633 214 IASNPR--------RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285 (323)
Q Consensus 214 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (323)
...... ............. .......+.++++|+++|+|++|..+|++..+.+.+.+ +++++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~ 228 (255)
T PLN02965 155 YYNQSPLEDYTLSSKLLRPAPVRAFQD----LDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLE 228 (255)
T ss_pred HhcCCCHHHHHHHHHhcCCCCCcchhh----hhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEec
Confidence 000000 0000000000000 01122345578999999999999999999999999999 788999999
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 286 GMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++||++++++|++ +.+.|.+|++..
T Consensus 229 ~~GH~~~~e~p~~----v~~~l~~~~~~~ 253 (255)
T PLN02965 229 DSDHSAFFSVPTT----LFQYLLQAVSSL 253 (255)
T ss_pred CCCCchhhcCHHH----HHHHHHHHHHHh
Confidence 9999999877776 888888887653
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=228.05 Aligned_cols=264 Identities=18% Similarity=0.218 Sum_probs=165.2
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH-HHHHHh---hCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISFA---TWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+.+.+| +|+|...+|.++..+++|||+||++++.. .|.. +...|. +.+|+|+++|+||||.|+.+....++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 3444456 99999999876455789999999998877 7764 445554 3689999999999999986544456889
Q ss_pred HHhhcHH-HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh--
Q 020633 109 KVAASSL-SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-- 185 (323)
Q Consensus 109 ~~~~d~~-~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-- 185 (323)
++++++. .+++.+.. .+++++||||||.+++.+|.++|++ |+++|++++............ .......
T Consensus 258 ~~a~~l~~~ll~~lg~------~k~~LVGhSmGG~iAl~~A~~~Pe~-V~~LVLi~~~~~~~~~~~~~~--~~~~~~~~~ 328 (481)
T PLN03087 258 EHLEMIERSVLERYKV------KSFHIVAHSLGCILALALAVKHPGA-VKSLTLLAPPYYPVPKGVQAT--QYVMRKVAP 328 (481)
T ss_pred HHHHHHHHHHHHHcCC------CCEEEEEECHHHHHHHHHHHhChHh-ccEEEEECCCccccccchhHH--HHHHHHhcc
Confidence 9999984 78887753 3899999999999999999999999 999999997644322111000 0000000
Q ss_pred hhhhcccccCCc-ccccc---c-----ccCChHHHHH----HhcCC-CCc--------CCCCchhHHHHHHHH----H-H
Q 020633 186 FGLADTWAAMPD-NKMVG---K-----AIKDPEKLKV----IASNP-RRY--------TGKPRVGTMREIARV----C-Q 238 (323)
Q Consensus 186 ~~~~~~~~~~~~-~~~~~---~-----~~~~~~~~~~----~~~~~-~~~--------~~~~~~~~~~~~~~~----~-~ 238 (323)
....+....... ..+.. . .......... ..... ... ...........+... . .
T Consensus 329 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~ 408 (481)
T PLN03087 329 RRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDG 408 (481)
T ss_pred cccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhh
Confidence 000000000000 00000 0 0000000000 00000 000 000000011011100 0 1
Q ss_pred HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccccc-CCCchhHHHHHHHHHHHHHH
Q 020633 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ-GEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.....++++|+|+|+|++|.++|++..+.+.+.+ +++++++++++||..++ ++|+. +++.|.+|...
T Consensus 409 ~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~----fa~~L~~F~~~ 478 (481)
T PLN03087 409 YLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKE----FARELEEIWRR 478 (481)
T ss_pred HHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHH----HHHHHHHHhhc
Confidence 112223468999999999999999999999999999 88999999999999885 66655 88888888753
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=216.37 Aligned_cols=260 Identities=13% Similarity=0.175 Sum_probs=159.1
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
++.+..+++..+++++|...+. +++|||+||++.+.. .|..+.+.|.+. |+|+++|+||||.|+.+....+++
T Consensus 12 ~~~~~~~~~~~~~~i~y~~~G~-----~~~iv~lHG~~~~~~-~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 84 (286)
T PRK03204 12 YPFESRWFDSSRGRIHYIDEGT-----GPPILLCHGNPTWSF-LYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQI 84 (286)
T ss_pred ccccceEEEcCCcEEEEEECCC-----CCEEEEECCCCccHH-HHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCH
Confidence 3445556665433999887763 478999999987666 788999999764 999999999999998654434578
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh--h-
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG--L- 184 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~--~- 184 (323)
+++++++.++++++.. .+++++||||||.+++.++..+|++ |+++|++++........... ....... .
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~lvG~S~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~ 156 (286)
T PRK03204 85 DEHARVIGEFVDHLGL------DRYLSMGQDWGGPISMAVAVERADR-VRGVVLGNTWFWPADTLAMK-AFSRVMSSPPV 156 (286)
T ss_pred HHHHHHHHHHHHHhCC------CCEEEEEECccHHHHHHHHHhChhh-eeEEEEECccccCCCchhHH-HHHHHhccccc
Confidence 9999999999988754 3799999999999999999999999 99999987654221110000 0000000 0
Q ss_pred hhhhhcccccCCcccccc----cccCChHHHHHHhcCCCCcCCCCchhHHH-H---HHHHHHHHHhcCCC--CCcCEEEE
Q 020633 185 LFGLADTWAAMPDNKMVG----KAIKDPEKLKVIASNPRRYTGKPRVGTMR-E---IARVCQYIQDNFSK--VTVPFLTV 254 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~--~~~P~l~i 254 (323)
...... . ......+.. ........ ..+................. . ...........+.. +++|+++|
T Consensus 157 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 157 QYAILR-R-NFFVERLIPAGTEHRPSSAVM-AHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred hhhhhh-h-hHHHHHhccccccCCCCHHHH-HHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 000000 0 000000000 00000111 11100000000000000000 0 00000111111111 28999999
Q ss_pred eeCCCcccCch-hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 255 HGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 255 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+|++|.++++. ..+.+.+.+ ++.++++++++||++++++|++ +.+.|.+||
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDR----IAAAIIERF 285 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHH----HHHHHHHhc
Confidence 99999988665 467788888 7899999999999999777766 888888886
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=214.79 Aligned_cols=252 Identities=13% Similarity=0.117 Sum_probs=161.8
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
++|..+++.+...+|+|||+||++++.. .|..++..|.+ +|+|+++|+||||.|..... .+++++++|+.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDAL 78 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchh-HHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHHc
Confidence 5666666665467899999999998877 89899999976 49999999999999986543 48999999999999998
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMV 201 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (323)
.. .+++|+||||||.+++.+|.++|++ |+++|++++............................ .......
T Consensus 79 ~~------~~~~lvGhS~Gg~va~~~a~~~~~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 149 (255)
T PRK10673 79 QI------EKATFIGHSMGGKAVMALTALAPDR-IDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR--QQAAAIM 149 (255)
T ss_pred CC------CceEEEEECHHHHHHHHHHHhCHhh-cceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH--HHHHHHH
Confidence 54 3799999999999999999999999 9999998753321110000000000000000000000 0000000
Q ss_pred ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccE
Q 020633 202 GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI 281 (323)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
..................................... ....++++++|+|+|+|++|..++.+..+.+.+.+ +++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~ 226 (255)
T PRK10673 150 RQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-GWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQARA 226 (255)
T ss_pred HHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh-CCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CCcEE
Confidence 0011111111111111000000000000111111000 12346678999999999999999999999998888 78999
Q ss_pred EEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 282 KIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 282 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++++||+.++++|+. +.+.|.+||.+
T Consensus 227 ~~~~~~gH~~~~~~p~~----~~~~l~~fl~~ 254 (255)
T PRK10673 227 HVIAGAGHWVHAEKPDA----VLRAIRRYLND 254 (255)
T ss_pred EEeCCCCCeeeccCHHH----HHHHHHHHHhc
Confidence 99999999999766655 88999999875
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=221.63 Aligned_cols=264 Identities=19% Similarity=0.235 Sum_probs=164.8
Q ss_pred eeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
..++...+. +++|...|++. ...+++|||+||++++.. .|..++..|.+ +|+|+++|+||||.|+......+++++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~ 140 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMET 140 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHH
Confidence 345555566 89999888641 113589999999998877 89999999976 699999999999999865444468899
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCCCCC-chhhHHHHHh---hh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENM-KPSKLHLFMY---GL 184 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~---~~ 184 (323)
+++++.++++.+..+ +++|+||||||.+++.++.. +|++ |+++|++++........ ...+...... ..
T Consensus 141 ~a~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~P~r-V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
T PLN02679 141 WAELILDFLEEVVQK------PTVLIGNSVGSLACVIAASESTRDL-VRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWL 213 (360)
T ss_pred HHHHHHHHHHHhcCC------CeEEEEECHHHHHHHHHHHhcChhh-cCEEEEECCccccccccccchHHHhhhcchHHH
Confidence 999999999988643 89999999999999988874 6888 99999999764322111 0011000000 00
Q ss_pred hhhh------hccc-ccCC----ccccc-----ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCC
Q 020633 185 LFGL------ADTW-AAMP----DNKMV-----GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSK 246 (323)
Q Consensus 185 ~~~~------~~~~-~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (323)
+... .... .... ..... ................ ................. .+....+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (360)
T PLN02679 214 IDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGP---ADDEGALDAFVSIVTGPPGPNPIKLIPR 290 (360)
T ss_pred HHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhh---ccCCChHHHHHHHHhcCCCCCHHHHhhh
Confidence 0000 0000 0000 00000 0000011111111100 00000111111111100 012345678
Q ss_pred CCcCEEEEeeCCCcccCchh-----HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTS-----SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++|+|+|+|++|.++|.+. ...+.+.+ +++++++++++||++++++|++ +++.|.+||++
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~----~~~~I~~FL~~ 356 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDL----VHEKLLPWLAQ 356 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHH----HHHHHHHHHHh
Confidence 89999999999999998863 22344455 7899999999999999666655 99999999975
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=211.59 Aligned_cols=248 Identities=13% Similarity=0.131 Sum_probs=161.7
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
++|..+++++ .++|+||++||++++.. .|..+++.|.+ +|+|+++|+||||.|.......++++++++++.++++++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGS-YWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchh-HHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4677787654 45789999999998877 88888888865 699999999999999865555568999999999999988
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhc-cccc-----C
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD-TWAA-----M 195 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~ 195 (323)
.. .+++++||||||.+++.++.++|+. |+++|++++........... .......+..... .+.. .
T Consensus 78 ~~------~~~~l~G~S~Gg~~a~~~a~~~~~~-v~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T TIGR03611 78 NI------ERFHFVGHALGGLIGLQLALRYPER-LLSLVLINAWSRPDPHTRRC--FDVRIALLQHAGPEAYVHAQALFL 148 (257)
T ss_pred CC------CcEEEEEechhHHHHHHHHHHChHH-hHHheeecCCCCCChhHHHH--HHHHHHHHhccCcchhhhhhhhhh
Confidence 64 3799999999999999999999988 99999998765432111100 0000000000000 0000 0
Q ss_pred CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
....+..... .............+.. ........... .+....+.++++|+++++|++|.++|++.++.+.+.
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 223 (257)
T TIGR03611 149 YPADWISENA--ARLAADEAHALAHFPG---KANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAA 223 (257)
T ss_pred ccccHhhccc--hhhhhhhhhcccccCc---cHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHh
Confidence 0000000000 0000000000000000 00011110100 112345678899999999999999999999999988
Q ss_pred cCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ ++.+++.++++||...+++|++ +.+.|.+||+
T Consensus 224 ~--~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 256 (257)
T TIGR03611 224 L--PNAQLKLLPYGGHASNVTDPET----FNRALLDFLK 256 (257)
T ss_pred c--CCceEEEECCCCCCccccCHHH----HHHHHHHHhc
Confidence 8 7789999999999999765554 8888999985
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=212.71 Aligned_cols=242 Identities=16% Similarity=0.188 Sum_probs=149.3
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
|+|..+|.+ .|+|||+||++++.. .|..+.+.|.++ |+|+++|+||||.|+... ..+++++++++.+ +
T Consensus 4 ~~y~~~G~g----~~~ivllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~ 71 (256)
T PRK10349 4 IWWQTKGQG----NVHLVLLHGWGLNAE-VWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q 71 (256)
T ss_pred cchhhcCCC----CCeEEEECCCCCChh-HHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c
Confidence 555555532 357999999998887 899999999776 999999999999997543 2466666665543 2
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc-hhh---HHHHHhhhhh----hhhcccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-PSK---LHLFMYGLLF----GLADTWA 193 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~-~~~---~~~~~~~~~~----~~~~~~~ 193 (323)
. ..+++++||||||.+++.+|.++|++ |+++|++++......... ... ........+. .....+.
T Consensus 72 ~------~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
T PRK10349 72 A------PDKAIWLGWSLGGLVASQIALTHPER-VQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFL 144 (256)
T ss_pred C------CCCeEEEEECHHHHHHHHHHHhChHh-hheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHH
Confidence 2 34899999999999999999999999 999999987543221110 000 0001100000 0000000
Q ss_pred cCCcccccccccCChHHHHHHhcC-CCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASN-PRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
. .................... .................. ..+....+.++++|+|+|+|++|.++|.+.++.+.+
T Consensus 145 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 220 (256)
T PRK10349 145 A---LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 220 (256)
T ss_pred H---HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHH
Confidence 0 00000000000001111000 000000000000111111 112445678899999999999999999998888888
Q ss_pred HcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+ +++++++++++||++++++|+. +.+.+.+|-.
T Consensus 221 ~i--~~~~~~~i~~~gH~~~~e~p~~----f~~~l~~~~~ 254 (256)
T PRK10349 221 LW--PHSESYIFAKAAHAPFISHPAE----FCHLLVALKQ 254 (256)
T ss_pred hC--CCCeEEEeCCCCCCccccCHHH----HHHHHHHHhc
Confidence 88 8899999999999999777766 7777777743
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=211.86 Aligned_cols=256 Identities=15% Similarity=0.169 Sum_probs=163.7
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+...+| +++|...++.+ +++|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+......++++.+++|
T Consensus 10 ~~~~~~~~~~~~~~g~~~---~~~vv~~hG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (278)
T TIGR03056 10 RVTVGPFHWHVQDMGPTA---GPLLLLLHGTGASTH-SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAED 84 (278)
T ss_pred eeeECCEEEEEEecCCCC---CCeEEEEcCCCCCHH-HHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHH
Confidence 334477 99998887643 589999999998877 89999999976 5999999999999998655444689999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch---hhHHHHHh--hhhhhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP---SKLHLFMY--GLLFGL 188 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~---~~~~~~~~--~~~~~~ 188 (323)
+.++++.+..+ +++|+||||||.+++.++.++|++ ++++|++++.......... ........ ......
T Consensus 85 l~~~i~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T TIGR03056 85 LSALCAAEGLS------PDGVIGHSAGAAIALRLALDGPVT-PRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPM 157 (278)
T ss_pred HHHHHHHcCCC------CceEEEECccHHHHHHHHHhCCcc-cceEEEEcCcccccccccccccchhhHhhhhcccchHH
Confidence 99999887533 789999999999999999999998 9999998875432211100 00000000 000000
Q ss_pred hcccccCC--cccccc---cccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH--HHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 189 ADTWAAMP--DNKMVG---KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV--CQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 189 ~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
........ ...... ...... ....+..... .............. .......++++++|+++|+|++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 158 MSRGAADQQRVERLIRDTGSLLDKA-GMTYYGRLIR---SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred HHhhcccCcchhHHhhccccccccc-hhhHHHHhhc---CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 00000000 000000 000000 0000000000 00000000000000 0112345678899999999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.+.++.+.+.+ +++++++++++||++++++|++ +.+.|.+|++
T Consensus 234 vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADG----VVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHH----HHHHHHHHhC
Confidence 9999999998888 7889999999999999665544 8899998873
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-31 Score=211.51 Aligned_cols=264 Identities=14% Similarity=0.116 Sum_probs=167.1
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC--- 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--- 102 (323)
+++.........+| +++|...++.+ +++|||+||++++.. .|+.++..|++ +|+|+++|+||||.|+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~y~~~G~~~---~~~ivllHG~~~~~~-~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~ 175 (383)
T PLN03084 101 GLKMGAQSQASSDLFRWFCVESGSNN---NPPVLLIHGFPSQAY-SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYG 175 (383)
T ss_pred cccccceeEEcCCceEEEEEecCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCccccc
Confidence 34434444556778 99998887643 689999999998877 89999999976 69999999999999986543
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
..++++++++++.++++++..+ +++|+|||+||.+++.++.++|++ |+++|++++.........+. ....+.
T Consensus 176 ~~ys~~~~a~~l~~~i~~l~~~------~~~LvG~s~GG~ia~~~a~~~P~~-v~~lILi~~~~~~~~~~~p~-~l~~~~ 247 (383)
T PLN03084 176 FNYTLDEYVSSLESLIDELKSD------KVSLVVQGYFSPPVVKYASAHPDK-IKKLILLNPPLTKEHAKLPS-TLSEFS 247 (383)
T ss_pred ccCCHHHHHHHHHHHHHHhCCC------CceEEEECHHHHHHHHHHHhChHh-hcEEEEECCCCccccccchH-HHHHHH
Confidence 2458999999999999999754 799999999999999999999999 99999999864322110111 011110
Q ss_pred hhh-hhhhcccccCCccccc---ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--------HHHHhc--CCCCC
Q 020633 183 GLL-FGLADTWAAMPDNKMV---GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--------QYIQDN--FSKVT 248 (323)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~ 248 (323)
..+ ..+............. ............+.... ........ ....+.... ...... ..+++
T Consensus 248 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~-~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~ 325 (383)
T PLN03084 248 NFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPY-LTSGSSGF-ALNAISRSMKKELKKYIEEMRSILTDKNWK 325 (383)
T ss_pred HHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccc-cCCcchHH-HHHHHHHHhhcccchhhHHHHhhhccccCC
Confidence 000 0000000000000000 00000111111111100 00000000 001111110 011111 14679
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|+++|+|+.|.+++.+.++.+.+. .+.++++++++||+++.++|++ +++.|.+||.
T Consensus 326 vPvLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~E~Pe~----v~~~I~~Fl~ 382 (383)
T PLN03084 326 TPITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQEDCGEE----LGGIISGILS 382 (383)
T ss_pred CCEEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcchhCHHH----HHHHHHHHhh
Confidence 9999999999999999888877775 3679999999999999666555 8899999985
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-31 Score=209.09 Aligned_cols=248 Identities=17% Similarity=0.170 Sum_probs=151.0
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
+++|...+. +++|||+||++++.. .|.. .+..|.+.||+|+++|+||||.|+...........+++|+.++
T Consensus 21 ~~~y~~~g~-----~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 21 RIHYNEAGN-----GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred eEEEEecCC-----CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 577766542 468999999987765 4543 3456667789999999999999975432111122457888899
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc--hhhHHHHHhhhhhhh-hccccc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFGL-ADTWAA 194 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~ 194 (323)
++.+..+ +++++||||||.+++.++.++|++ ++++|++++......... ............... ......
T Consensus 95 l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (282)
T TIGR03343 95 MDALDIE------KAHLVGNSMGGATALNFALEYPDR-IGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQ 167 (282)
T ss_pred HHHcCCC------CeeEEEECchHHHHHHHHHhChHh-hceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHH
Confidence 8888644 899999999999999999999999 999999987532111000 000001110000000 000000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHH-------HHHHHHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR-------VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
......................... ... .....+.. ...+....++++++|+|+++|++|.+++++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 168 MLNVFLFDQSLITEELLQGRWENIQ---RQP--EHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHhhCccCcccCcHHHHHhHHHHhh---cCH--HHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 0000000000000000000000000 000 00000000 00112345678999999999999999999999
Q ss_pred HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.+.+.+ +++++++++++||++++++|+. +.+.|.+||+
T Consensus 243 ~~~~~~~--~~~~~~~i~~agH~~~~e~p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNM--PDAQLHVFSRCGHWAQWEHADA----FNRLVIDFLR 281 (282)
T ss_pred HHHHHhC--CCCEEEEeCCCCcCCcccCHHH----HHHHHHHHhh
Confidence 9999988 8899999999999999777665 8899999985
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=211.47 Aligned_cols=259 Identities=12% Similarity=0.108 Sum_probs=156.0
Q ss_pred CCC-cEEEEEecCCCC----CcceEEEEecCCCCCccccHH--HHHHHH-------hhCCcEEEEecCCCCcCCCCCccc
Q 020633 38 PNG-KLFTQSFLPLDQ----KVKATVYMTHGYGSDTGWMFQ--KICISF-------ATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
.+| +++|..+|.+.. +.+|+|||+||++++.. .|. .+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 567 999998875320 11579999999998765 443 455444 135699999999999999754321
Q ss_pred ------CCChHHHhhcHHHHH-HHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 104 ------LGDMEKVAASSLSFF-KHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 104 ------~~~~~~~~~d~~~~l-~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.++++++++++.+++ +++..+ +++ |+||||||.+|+.+|.++|++ |+++|++++....... ..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~------~~~~lvG~SmGG~vAl~~A~~~P~~-V~~LVLi~s~~~~~~~--~~ 196 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK------HLRLILGTSMGGMHAWMWGEKYPDF-MDALMPMASQPTEMSG--RN 196 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC------ceeEEEEECHHHHHHHHHHHhCchh-hheeeeeccCcccccH--HH
Confidence 357888888887754 666543 664 899999999999999999999 9999999875321110 11
Q ss_pred hHHHH-Hhhhhhhhhcccc---cCCcc-c---cc---------------ccccCChHHHHHHhcCCCCcCCCCchhHHHH
Q 020633 176 KLHLF-MYGLLFGLADTWA---AMPDN-K---MV---------------GKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232 (323)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~~---~~~~~-~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
+.... ......... .+. ..... . .. ...................... ........
T Consensus 197 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 274 (360)
T PRK06489 197 WMWRRMLIESIRNDP-AWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT-ADANDFLY 274 (360)
T ss_pred HHHHHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh-cCHHHHHH
Confidence 10000 000000000 000 00000 0 00 0000000000000000000000 00011111
Q ss_pred HHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhH--HHHHHHcCCCCccEEEecCC----CcccccCCCchhHHHHH
Q 020633 233 IARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSS--KLLYEKASSADKSIKIYDGM----YHSLIQGEPDENANLVL 304 (323)
Q Consensus 233 ~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~ 304 (323)
..... .+..+.+.+|++|+|+|+|++|.++|++.+ +.+.+.+ ++.++++++++ ||..+ ++|+. +.
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e~P~~----~~ 347 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT-GSAKF----WK 347 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc-cCHHH----HH
Confidence 11111 113456788999999999999999998865 7788888 88999999996 99987 65554 99
Q ss_pred HHHHHHHHHHH
Q 020633 305 KDMREWIDERV 315 (323)
Q Consensus 305 ~~i~~fl~~~~ 315 (323)
+.|.+||++..
T Consensus 348 ~~i~~FL~~~~ 358 (360)
T PRK06489 348 AYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHhcc
Confidence 99999998754
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-30 Score=209.43 Aligned_cols=254 Identities=19% Similarity=0.192 Sum_probs=162.4
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+...+| +++|...+. +++|||+||++++.. .|..+.+.|++. |+|+++|+||||.|+.... .++.+.+++
T Consensus 69 ~~~~~~~~~i~Y~~~g~-----g~~vvliHG~~~~~~-~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~-~~~~~~~a~ 140 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE-----GLPIVLIHGFGASAF-HWRYNIPELAKK-YKVYALDLLGFGWSDKALI-EYDAMVWRD 140 (354)
T ss_pred eEEEECCEEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHHhcC-CEEEEECCCCCCCCCCccc-ccCHHHHHH
Confidence 3334467 898887652 468999999998876 888889999764 9999999999999986543 358888999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch---------hhH----HH
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP---------SKL----HL 179 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~---------~~~----~~ 179 (323)
++.++++.+..+ +++++|||+||.+++.+|.++|++ |+++|++++.......... ... ..
T Consensus 141 ~l~~~i~~~~~~------~~~lvG~S~Gg~ia~~~A~~~p~~-v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (354)
T PLN02578 141 QVADFVKEVVKE------PAVLVGNSLGGFTALSTAVGYPEL-VAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVK 213 (354)
T ss_pred HHHHHHHHhccC------CeEEEEECHHHHHHHHHHHhChHh-cceEEEECCCccccccccccccccccccchhhHHHhH
Confidence 999999988643 799999999999999999999999 9999998875432211100 000 00
Q ss_pred HHhhhhhhhhccc---ccCCcc---c-----ccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH------HHHHh
Q 020633 180 FMYGLLFGLADTW---AAMPDN---K-----MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC------QYIQD 242 (323)
Q Consensus 180 ~~~~~~~~~~~~~---~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 242 (323)
............+ ...... . +......+............ ............... ....+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T PLN02578 214 PLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAA---DPNAGEVYYRLMSRFLFNQSRYTLDS 290 (354)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhccc---CCchHHHHHHHHHHHhcCCCCCCHHH
Confidence 0000000000000 000000 0 00000000111111100000 000011111111110 01234
Q ss_pred cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+.++++|+++|+|++|.+++.+.++.+.+.+ ++.+++++ ++||+++.++|++ +.+.|.+|++
T Consensus 291 ~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~----~~~~I~~fl~ 353 (354)
T PLN02578 291 LLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQ----VNKALLEWLS 353 (354)
T ss_pred HhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHH----HHHHHHHHHh
Confidence 56789999999999999999999999999888 78899988 5899999776666 8899999985
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=197.10 Aligned_cols=272 Identities=20% Similarity=0.203 Sum_probs=165.0
Q ss_pred ccccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc
Q 020633 23 YTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 23 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 101 (323)
+....+++...++...++ .+......+.+ ..++++|+|||+|.... .|-.-.+.|++ .+.|+++|++|+|.|+.+.
T Consensus 58 l~~~~v~~~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g-~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~ 134 (365)
T KOG4409|consen 58 LSSVPVPYSKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLG-LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPK 134 (365)
T ss_pred hhhcCCCcceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHH-HHHHhhhhhhh-cCceEEecccCCCCCCCCC
Confidence 334567777777777777 66666665554 67899999999998888 67677778887 5999999999999998654
Q ss_pred ccCC---ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCC-Cc----
Q 020633 102 CYLG---DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN-MK---- 173 (323)
Q Consensus 102 ~~~~---~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~-~~---- 173 (323)
-... ....+++-++++....+. .+.+|+|||+||++|..||.+||++ |+.+||++|+...... ..
T Consensus 135 F~~d~~~~e~~fvesiE~WR~~~~L------~KmilvGHSfGGYLaa~YAlKyPer-V~kLiLvsP~Gf~~~~~~~~~~~ 207 (365)
T KOG4409|consen 135 FSIDPTTAEKEFVESIEQWRKKMGL------EKMILVGHSFGGYLAAKYALKYPER-VEKLILVSPWGFPEKPDSEPEFT 207 (365)
T ss_pred CCCCcccchHHHHHHHHHHHHHcCC------cceeEeeccchHHHHHHHHHhChHh-hceEEEecccccccCCCcchhhc
Confidence 3221 223444555555444443 3899999999999999999999999 9999999998765433 11
Q ss_pred --hhhHHHHHhhhhhhhhcccccCCcc----cccc-----------cccCChH-HHHHHhcCCCCcCCCCchhHHHHHH-
Q 020633 174 --PSKLHLFMYGLLFGLADTWAAMPDN----KMVG-----------KAIKDPE-KLKVIASNPRRYTGKPRVGTMREIA- 234 (323)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (323)
+......+......+.+........ .+.. ....+.. ..-.+..+ ...++.......+
T Consensus 208 ~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n----~~~psgE~~fk~l~ 283 (365)
T KOG4409|consen 208 KPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN----AQNPSGETAFKNLF 283 (365)
T ss_pred CCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc----CCCCcHHHHHHHHH
Confidence 1111111111111111100000000 0000 0001111 11111111 1111111111111
Q ss_pred ---H-HHHHHHhcCCCC--CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHH
Q 020633 235 ---R-VCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 235 ---~-~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
. ....+.+.+..+ +||+++|+|++|. ++.....++...+....++.++++++||.+++++|+. +++.+.
T Consensus 284 ~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~----Fn~~v~ 358 (365)
T KOG4409|consen 284 EPGGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF----FNQIVL 358 (365)
T ss_pred hccchhhhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHH----HHHHHH
Confidence 0 111233444444 4999999999985 4555566666654445689999999999999888877 777777
Q ss_pred HHHHH
Q 020633 309 EWIDE 313 (323)
Q Consensus 309 ~fl~~ 313 (323)
.++++
T Consensus 359 ~~~~~ 363 (365)
T KOG4409|consen 359 EECDK 363 (365)
T ss_pred HHHhc
Confidence 77754
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=192.38 Aligned_cols=231 Identities=14% Similarity=0.109 Sum_probs=159.1
Q ss_pred ccceeEEEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~ 104 (323)
...++.+.+.+| +|+++...|.+ ..+.++||++||++.+.. .+..+++.|+++||.|+.+|+||+ |.|++.....
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 446678889999 99999999963 356789999999998766 699999999999999999999988 9997654322
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++.....|+.+++++++... ..++.|+||||||.+|+..|... . ++++|+.+|+......... .
T Consensus 87 -t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~-v~~lI~~sp~~~l~d~l~~---------~ 150 (307)
T PRK13604 87 -TMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--D-LSFLITAVGVVNLRDTLER---------A 150 (307)
T ss_pred -cccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--C-CCEEEEcCCcccHHHHHHH---------h
Confidence 44445799999999998753 45899999999999997766632 3 8999999998764321110 0
Q ss_pred hhhhhcccccCCccc---ccccccC-ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc
Q 020633 185 LFGLADTWAAMPDNK---MVGKAIK-DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
+......+....... +.+.... ..........+... .....+.++++++|+|+|||++|.
T Consensus 151 ~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~----------------~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 151 LGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDT----------------LDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred hhcccccCcccccccccccccccccHHHHHHHHHhcCccc----------------cccHHHHHhhcCCCEEEEEcCCCC
Confidence 000000000000000 0000000 00111111111100 011234456778999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
+||.+.++.+++.+.+.++++++++|++|.+.
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 99999999999988656799999999999998
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=179.56 Aligned_cols=228 Identities=15% Similarity=0.188 Sum_probs=169.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+..||+|||+.|+.. ..+.++++|.++||.|.++.+||||.....-- ..+.++|.+|+.+..++|.... ...|.+
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl-~t~~~DW~~~v~d~Y~~L~~~g---y~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFL-KTTPRDWWEDVEDGYRDLKEAG---YDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHh-cCCHHHHHHHHHHHHHHHHHcC---CCeEEE
Confidence 479999999999988 89999999999999999999999998863222 2378999999999999999442 458999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|.||||.+++.+|..+| ++++|.++++......... ...+...... ...... ...+.....+
T Consensus 90 ~GlSmGGv~alkla~~~p---~K~iv~m~a~~~~k~~~~i---ie~~l~y~~~----~kk~e~-------k~~e~~~~e~ 152 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP---PKKIVPMCAPVNVKSWRII---IEGLLEYFRN----AKKYEG-------KDQEQIDKEM 152 (243)
T ss_pred EeecchhHHHHHHHhhCC---ccceeeecCCcccccchhh---hHHHHHHHHH----hhhccC-------CCHHHHHHHH
Confidence 999999999999999988 7899998887664432221 1111111110 000000 0011111111
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
... . .........+....+.....+..|..|++++.|.+|+.+|.+.+..+++.+.+.+.++.+++++||.+..
T Consensus 153 ~~~----~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~- 226 (243)
T COG1647 153 KSY----K-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL- 226 (243)
T ss_pred HHh----h-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeec-
Confidence 111 0 0122334455555666778888999999999999999999999999999998888999999999999984
Q ss_pred CCchhHHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWID 312 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~ 312 (323)
++.++++.+.+..||+
T Consensus 227 --D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 227 --DKERDQVEEDVITFLE 242 (243)
T ss_pred --chhHHHHHHHHHHHhh
Confidence 6678899999999996
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=208.77 Aligned_cols=261 Identities=9% Similarity=0.005 Sum_probs=153.8
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHH---HHHhhCCcEEEEecCCCCcCCCCCcc--cCCChHH---
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC---ISFATWGYAVFAADLLGHGRSDGIRC--YLGDMEK--- 109 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~--- 109 (323)
+| +|+|..+|+.+.+..|+||++||++++.. .|..+. ..|...+|+||++|+||||.|+.+.. ..++++.
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 56 89999998743233567777787776655 454333 35655679999999999999975432 1223332
Q ss_pred --HhhcHHH----HHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 110 --VAASSLS----FFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 110 --~~~d~~~----~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
+++|+.+ +++++..+ + ++|+||||||++|+.+|.++|++ |+++|++++....... .........
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~------~~~~lvG~S~GG~va~~~a~~~P~~-V~~Lvli~~~~~~~~~--~~~~~~~~~ 173 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIE------RLALVVGWSMGAQQTYHWAVRYPDM-VERAAPIAGTAKTTPH--NFVFLEGLK 173 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCC------ceEEEEEeCHHHHHHHHHHHHCHHH-HhhheeeecCCCCCHH--HHHHHHHHH
Confidence 4566655 55666643 7 47999999999999999999999 9999999865432110 000000000
Q ss_pred hhhhhhhcccc----cC-----------------Ccccccc----cccC----ChHHHHHHhcCCCCcCCCCchhHHHHH
Q 020633 183 GLLFGLADTWA----AM-----------------PDNKMVG----KAIK----DPEKLKVIASNPRRYTGKPRVGTMREI 233 (323)
Q Consensus 183 ~~~~~~~~~~~----~~-----------------~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
..+... +.+. .. ....+.. .... ..........................+
T Consensus 174 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (339)
T PRK07581 174 AALTAD-PAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTW 252 (339)
T ss_pred HHHHhC-CCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHh
Confidence 000000 0000 00 0000000 0000 000001111000000000000000000
Q ss_pred HH-----H---HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC-CCcccccCCCchhHHHHH
Q 020633 234 AR-----V---CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG-MYHSLIQGEPDENANLVL 304 (323)
Q Consensus 234 ~~-----~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~ 304 (323)
.. . ..+....++++++|+|+|+|++|..+|++.++.+.+.+ ++++++++++ +||..++++++. +.
T Consensus 253 ~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~----~~ 326 (339)
T PRK07581 253 QRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPA----DI 326 (339)
T ss_pred hhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHH----HH
Confidence 00 0 01234567789999999999999999999999998888 7899999998 999999887776 77
Q ss_pred HHHHHHHHHHHh
Q 020633 305 KDMREWIDERVE 316 (323)
Q Consensus 305 ~~i~~fl~~~~~ 316 (323)
..|.+||++.+.
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 888888877653
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=203.09 Aligned_cols=251 Identities=18% Similarity=0.168 Sum_probs=155.2
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc--CCChHHHhhc
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY--LGDMEKVAAS 113 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~d 113 (323)
..+| ++.|...++. +.+++|||+||++++....|..+...|.+.||+|+++|+||+|.|...... ..+++.+++|
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 8 TVDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred cCCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 3445 7877776653 336899999998766553566777777666899999999999999754322 2588999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH-HHhhhhhhhhccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL-FMYGLLFGLADTW 192 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 192 (323)
+.++++++..+ +++++||||||.+++.++..+|++ ++++|++++............... .+...........
T Consensus 86 ~~~~~~~~~~~------~~~liG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (288)
T TIGR01250 86 LEEVREKLGLD------KFYLLGHSWGGMLAQEYALKYGQH-LKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRC 158 (288)
T ss_pred HHHHHHHcCCC------cEEEEEeehHHHHHHHHHHhCccc-cceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHH
Confidence 99999887643 799999999999999999999998 999999887543221100000000 0000000000000
Q ss_pred ccCCcccccccccCChHHHHHH----------------------hcCCCC----cCCCCchhHHHHHHHHHHHHHhcCCC
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVI----------------------ASNPRR----YTGKPRVGTMREIARVCQYIQDNFSK 246 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (323)
.. . ............ ...... ............ . ...+....+.+
T Consensus 159 ~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~ 229 (288)
T TIGR01250 159 EA--S-----GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGN-L-KDWDITDKLSE 229 (288)
T ss_pred Hh--c-----cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccccccc-c-cccCHHHHhhc
Confidence 00 0 000000000000 000000 000000000000 0 00012345678
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++|+++++|++|.+ +++..+.+.+.+ ++.++++++++||+.++++|++ +.+.|.+||+
T Consensus 230 i~~P~lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~ 288 (288)
T TIGR01250 230 IKVPTLLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEV----YFKLLSDFIR 288 (288)
T ss_pred cCCCEEEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHH----HHHHHHHHhC
Confidence 899999999999985 567788888877 6789999999999999776665 8888888873
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=205.02 Aligned_cols=283 Identities=11% Similarity=0.056 Sum_probs=171.0
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCC---CCCcceEEEEecCCCCCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPL---DQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~---~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
..+.+++..+.+.|| .+.+..+.+. ....+|+||++||+++++.. ++..++..+.++||+|+++|+||||.|...
T Consensus 67 ~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 67 PAVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT 146 (388)
T ss_pred CCCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 446677888999999 8877655421 12457899999999876542 335577777788999999999999999753
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-ceeEEEEccCcccCCCCC---ch--
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENM---KP-- 174 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~vl~~~~~~~~~~~---~~-- 174 (323)
.... ....+++|+.++++++..+++ ..+++++||||||.+++.++.+++++ .|.++++++++.+..... ..
T Consensus 147 ~~~~-~~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~ 223 (388)
T PLN02511 147 TPQF-YSASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGF 223 (388)
T ss_pred CcCE-EcCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccH
Confidence 3222 235678899999999998764 56899999999999999999998864 267777776654321000 00
Q ss_pred -hhHHHHHhhhhhhhhcc----cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc
Q 020633 175 -SKLHLFMYGLLFGLADT----WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 175 -~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
......+...+...... +...................++......... ......+++.. ......+.+|++
T Consensus 224 ~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~---gf~~~~~yy~~-~s~~~~L~~I~v 299 (388)
T PLN02511 224 NNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF---GFKSVDAYYSN-SSSSDSIKHVRV 299 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC---CCCCHHHHHHH-cCchhhhccCCC
Confidence 00000011011111100 0000000000000000001111100000000 11111111111 113456788999
Q ss_pred CEEEEeeCCCcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchh--HHHHHHHHHHHHHHHHhh
Q 020633 250 PFLTVHGTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDEN--ANLVLKDMREWIDERVER 317 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~--~~~~~~~i~~fl~~~~~~ 317 (323)
|+|+|+|++|+++|.+.. ....+.. +++++++++++||..+++.|+.. ...+.+.+.+||+.....
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999999999998765 3444555 78999999999999999887642 123577888888877643
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=198.23 Aligned_cols=231 Identities=16% Similarity=0.234 Sum_probs=144.6
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+.+.|.+ +|+|+++|+||+|.|..... .+++++++++.+.+ ..++++
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~----------~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA----------PDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC----------CCCeEE
Confidence 479999999998877 89999999975 59999999999999875432 36666666655432 238999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC--chhh---HHHHHhhhhh----hhhcccccCCccccccccc
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KPSK---LHLFMYGLLF----GLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~--~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 205 (323)
+||||||.+++.++.++|++ ++++|++++........ .... ....+...+. .....+... .......
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 145 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDR-VRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLAL---QTLGTPT 145 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHh-hheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHH---HHhcCCc
Confidence 99999999999999999998 99999988765432111 0000 0000000000 000000000 0000000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEE
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
............... ............... .+....+.++++|+++++|++|.++|.+..+.+.+.+ +++++++
T Consensus 146 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 221 (245)
T TIGR01738 146 ARQDARALKQTLLAR--PTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYI 221 (245)
T ss_pred cchHHHHHHHHhhcc--CCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEE
Confidence 011111111100000 000011111111111 1133456789999999999999999999988888888 7899999
Q ss_pred ecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 284 YDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++++||++++++|++ +.+.|.+|+
T Consensus 222 ~~~~gH~~~~e~p~~----~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLSHAEA----FCALLVAFK 245 (245)
T ss_pred eCCCCCCccccCHHH----HHHHHHhhC
Confidence 999999999877766 888888874
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=200.89 Aligned_cols=247 Identities=17% Similarity=0.182 Sum_probs=157.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+++|..+++. +.+|+||++||++.+.. .|..+++.|. .||+|+++|+||||.|..... ..+++++++|+.++++.
T Consensus 1 ~~~~~~~g~~--~~~~~li~~hg~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 1 RLHYRLDGAA--DGAPVLVFINSLGTDLR-MWDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDH 75 (251)
T ss_pred CceEEeecCC--CCCCeEEEEcCcccchh-hHHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 3667777654 24689999999998877 8888998886 579999999999999975433 35899999999999998
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh-hhhhhhccc-ccCCcc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG-LLFGLADTW-AAMPDN 198 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~ 198 (323)
+.. .+++++|||+||.+++.+|.++|++ ++++|++++................... ......... ......
T Consensus 76 ~~~------~~v~liG~S~Gg~~a~~~a~~~p~~-v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR02427 76 LGI------ERAVFCGLSLGGLIAQGLAARRPDR-VRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTP 148 (251)
T ss_pred hCC------CceEEEEeCchHHHHHHHHHHCHHH-hHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccc
Confidence 863 3799999999999999999999998 9999998875432211000000000000 000000000 000000
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS 276 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 276 (323)
.... ........+...... . ............ ......+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 149 ~~~~---~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-- 219 (251)
T TIGR02427 149 GFRE---AHPARLDLYRNMLVR---Q-PPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-- 219 (251)
T ss_pred cccc---CChHHHHHHHHHHHh---c-CHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--
Confidence 0000 000000000000000 0 000000000000 1123456788999999999999999999888888887
Q ss_pred CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 277 ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 277 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++.++++++++||..++++|+. +.+.|.+|++
T Consensus 220 ~~~~~~~~~~~gH~~~~~~p~~----~~~~i~~fl~ 251 (251)
T TIGR02427 220 PGARFAEIRGAGHIPCVEQPEA----FNAALRDFLR 251 (251)
T ss_pred CCceEEEECCCCCcccccChHH----HHHHHHHHhC
Confidence 6789999999999999776655 7888888863
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=199.97 Aligned_cols=230 Identities=15% Similarity=0.170 Sum_probs=142.1
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+|+|||+||++++.. .|..+.+.| + +|+|+++|+||||.|..... .+++++++|+.++++.+.. +++++
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~------~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNI------LPYWL 70 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCC------CCeEE
Confidence 578999999998887 999999988 4 59999999999999986543 3889999999999998753 38999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc----c-ccCCcccccccccCChH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT----W-AAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 209 (323)
+||||||.+|+.+|.++|+..|++++++++.......................+... . ........... .....
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 149 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNAEQ 149 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCccH
Confidence 999999999999999986533999999887643322110000000000000000000 0 00000000000 00111
Q ss_pred HHHHHhcCCCCcCCCCchhHHHHHHHH-----HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe
Q 020633 210 KLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
........... ........... ..+..+.+.++++|+++|+|++|..+. .+.+. .+++++++
T Consensus 150 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i 216 (242)
T PRK11126 150 RQQLVAKRSNN-----NGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVI 216 (242)
T ss_pred HHHHHHhcccC-----CHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEe
Confidence 11111100000 00001111110 012345677899999999999998542 23332 36899999
Q ss_pred cCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++||++++++|++ +.+.|.+|+++
T Consensus 217 ~~~gH~~~~e~p~~----~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHRENPAA----FAASLAQILRL 241 (242)
T ss_pred CCCCCchhhhChHH----HHHHHHHHHhh
Confidence 99999999877766 88888888864
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=198.60 Aligned_cols=252 Identities=14% Similarity=0.134 Sum_probs=154.0
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +++|.. |. +.+|+|||+||++.+.. .|..+...|.++||+|+++|+||||.|........+++++++++.+
T Consensus 4 ~~~~~~~~~~--~~--~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMK--PN--RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccc--cc--CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 356 776655 32 44789999999998776 8999999998889999999999999886443333588999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc----c
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT----W 192 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 192 (323)
+++.+.. ..+++|+||||||.+++.++..+|++ |+++|++++............ .......+...... +
T Consensus 79 ~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~-v~~lv~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (273)
T PLN02211 79 FLSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKK-ICLAVYVAATMLKLGFQTDED-MKDGVPDLSEFGDVYELGF 151 (273)
T ss_pred HHHhcCC-----CCCEEEEEECchHHHHHHHHHhChhh-eeEEEEeccccCCCCCCHHHH-Hhccccchhhhccceeeee
Confidence 9887642 23899999999999999999999998 999999987532111111000 00000000000000 0
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH-----HHH--HHHHhcCCCC-CcCEEEEeeCCCcccCc
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-----RVC--QYIQDNFSKV-TVPFLTVHGTADGVTCP 264 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~-~~P~l~i~g~~D~~~~~ 264 (323)
.....................+..+... .......... ... ........++ ++|+++|.|++|..+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 152 GLGPDQPPTSAIIKKEFRRKILYQMSPQ----EDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred ccCCCCCCceeeeCHHHHHHHHhcCCCH----HHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 0000000000000001011111100000 0000000000 000 0011123344 78999999999999999
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+..+.+.+.+ +..+++.++ +||.+++++|++ +.+.|.+...
T Consensus 228 ~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~----~~~~i~~~a~ 268 (273)
T PLN02211 228 EQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFL----LFGLLIKAAA 268 (273)
T ss_pred HHHHHHHHhC--CccEEEEEC-CCCCccccCHHH----HHHHHHHHHH
Confidence 9999999988 567889997 899999988887 6666655543
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=206.90 Aligned_cols=257 Identities=12% Similarity=0.056 Sum_probs=154.7
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccc-----------cHHHHHH---HHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-----------MFQKICI---SFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
.+| +|+|..+|+.+ +++||+||+.++... .|..+.. .|...+|+|+++|+||||.|...
T Consensus 43 ~~~~~l~y~~~G~~~----~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-- 116 (343)
T PRK08775 43 LEDLRLRYELIGPAG----APVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-- 116 (343)
T ss_pred CCCceEEEEEeccCC----CCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--
Confidence 366 89999888632 346666666555442 4777775 56444699999999999988532
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
.++.+++++|+.++++++..+ ..++|+||||||++|+.+|.++|++ |+++|++++....... ...+ ....
T Consensus 117 -~~~~~~~a~dl~~ll~~l~l~-----~~~~lvG~SmGG~vA~~~A~~~P~~-V~~LvLi~s~~~~~~~-~~~~--~~~~ 186 (343)
T PRK08775 117 -PIDTADQADAIALLLDALGIA-----RLHAFVGYSYGALVGLQFASRHPAR-VRTLVVVSGAHRAHPY-AAAW--RALQ 186 (343)
T ss_pred -CCCHHHHHHHHHHHHHHcCCC-----cceEEEEECHHHHHHHHHHHHChHh-hheEEEECccccCCHH-HHHH--HHHH
Confidence 247889999999999998754 1357999999999999999999999 9999999986542210 0000 0000
Q ss_pred hhhhhhhcccccC-Cc----ccc-cccccCChHHHHHHhcCCCCcC-------------------CCCchhHHHHHHHHH
Q 020633 183 GLLFGLADTWAAM-PD----NKM-VGKAIKDPEKLKVIASNPRRYT-------------------GKPRVGTMREIARVC 237 (323)
Q Consensus 183 ~~~~~~~~~~~~~-~~----~~~-~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 237 (323)
............. .. ... .............+........ ..........+....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 0000000000000 00 000 0000000000000000000000 000000001111111
Q ss_pred HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC-CCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 238 QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 238 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
......+.++++|+|+|+|++|.++|++..+.+.+.+. ++.+++++++ +||..++++|++ +++.|.+||++.-
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~----~~~~l~~FL~~~~ 340 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDR----IDAILTTALRSTG 340 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHH----HHHHHHHHHHhcc
Confidence 10122467899999999999999999988888888773 4789999985 999999887776 9999999997653
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=197.85 Aligned_cols=217 Identities=24% Similarity=0.336 Sum_probs=147.1
Q ss_pred EEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
|||+||++++.. .|..+++.|+ +||+|+++|+||+|.|..... ...+++++++|+.++++.+..+ +++++|
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK------KVILVG 72 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS------SEEEEE
T ss_pred eEEECCCCCCHH-HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc------cccccc
Confidence 799999999887 8999999995 789999999999999986543 2358899999999999998853 899999
Q ss_pred echhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC--c-hhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHH
Q 020633 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--K-PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
||+||.+++.++.++|++ |+++|+++|........ . .......+............ ................
T Consensus 73 ~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 147 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDR-VKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA----SRFFYRWFDGDEPEDL 147 (228)
T ss_dssp ETHHHHHHHHHHHHSGGG-EEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTHHHHHHH
T ss_pred cccccccccccccccccc-cccceeecccccccccccccccchhhhhhhhcccccccccc----cccccccccccccccc
Confidence 999999999999999998 99999999876532111 0 00001111100000000000 0000000011111111
Q ss_pred HhcCCCCcCCCCchhHHHHHHH---HHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 214 IASNPRRYTGKPRVGTMREIAR---VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
... .......... ........++++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||+
T Consensus 148 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 216 (228)
T PF12697_consen 148 IRS---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHF 216 (228)
T ss_dssp HHH---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSST
T ss_pred ccc---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCc
Confidence 111 1111111111 223345667788999999999999999988889998888 78999999999999
Q ss_pred cccCCCch
Q 020633 291 LIQGEPDE 298 (323)
Q Consensus 291 ~~~~~~~~ 298 (323)
+++++|++
T Consensus 217 ~~~~~p~~ 224 (228)
T PF12697_consen 217 LFLEQPDE 224 (228)
T ss_dssp HHHHSHHH
T ss_pred cHHHCHHH
Confidence 99777665
|
... |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=202.76 Aligned_cols=261 Identities=12% Similarity=0.117 Sum_probs=159.4
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccc------------cHHHHHH---HHhhCCcEEEEecCCCC-cCCCCCc
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW------------MFQKICI---SFATWGYAVFAADLLGH-GRSDGIR 101 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~-G~s~~~~ 101 (323)
+| +|+|..+|..+++.+|+|||+||++++... .|..++. .|...+|+|+++|++|+ |.|+++.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 45 789999986432346899999999988651 2555542 34345799999999983 4443211
Q ss_pred ----c---------cCCChHHHhhcHHHHHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 102 ----C---------YLGDMEKVAASSLSFFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 102 ----~---------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
. ..++++++++++.++++++..+ + ++++||||||.+++.+|.++|++ |+++|++++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 183 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT------RLAAVVGGSMGGMQALEWAIDYPDR-VRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC------CceEEEEECHHHHHHHHHHHhChHh-hhEEEEECCCcc
Confidence 0 1358999999999999998764 6 58999999999999999999999 999999987654
Q ss_pred CCCCCchhhHHHHHhhhhhhhhccccc--------C-------------------------Ccccccccc----cCC-hH
Q 020633 168 IPENMKPSKLHLFMYGLLFGLADTWAA--------M-------------------------PDNKMVGKA----IKD-PE 209 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------------------~~~~~~~~~----~~~-~~ 209 (323)
...... .+ .......+.. ...+.. . ......... ... ..
T Consensus 184 ~~~~~~-~~-~~~~~~~i~~-~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~ 260 (379)
T PRK00175 184 LSAQNI-AF-NEVARQAILA-DPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQ 260 (379)
T ss_pred cCHHHH-HH-HHHHHHHHHh-CCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccch
Confidence 322100 00 0000000000 000000 0 000000000 000 00
Q ss_pred HHHHHh----cCCCCcCCCCchhHHHHHHHHHH-------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC
Q 020633 210 KLKVIA----SNPRRYTGKPRVGTMREIARVCQ-------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD 278 (323)
Q Consensus 210 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 278 (323)
...... ........ .............+ ++...+.+|++|+|+|+|++|.++|++.++.+.+.+ ++
T Consensus 261 ~~~~l~~~~~~~~~~~d~-~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i--~~ 337 (379)
T PRK00175 261 VESYLRYQGDKFVERFDA-NSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL--LA 337 (379)
T ss_pred HHHHHHHHHHHHhhccCc-hHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH--Hh
Confidence 000000 00000000 00000000111110 134567889999999999999999999999999998 44
Q ss_pred c----cEEEec-CCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 279 K----SIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 279 ~----~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
. ++++++ ++||..++++|++ +++.|.+||++...
T Consensus 338 a~~~~~l~~i~~~~GH~~~le~p~~----~~~~L~~FL~~~~~ 376 (379)
T PRK00175 338 AGADVSYAEIDSPYGHDAFLLDDPR----YGRLVRAFLERAAR 376 (379)
T ss_pred cCCCeEEEEeCCCCCchhHhcCHHH----HHHHHHHHHHhhhh
Confidence 4 677775 8999999877765 99999999988654
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=205.07 Aligned_cols=259 Identities=15% Similarity=0.179 Sum_probs=157.6
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccc----------cHHHHH---HHHhhCCcEEEEecCCC--CcCCCCC-
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW----------MFQKIC---ISFATWGYAVFAADLLG--HGRSDGI- 100 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~~- 100 (323)
.+| +|+|..+|+.+...+++||++||++++... .|..++ ..|..++|+|+++|+|| ||.|...
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 466 899999997432346799999999986521 366664 25556779999999999 5655421
Q ss_pred ---c-------ccCCChHHHhhcHHHHHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 101 ---R-------CYLGDMEKVAASSLSFFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 101 ---~-------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
. ...++++++++|+.+++++++.+ + ++++||||||.+++.++.++|++ |+++|++++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~l~G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 165 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE------QIAAVVGGSMGGMQALEWAIDYPER-VRAIVVLATSARHS 165 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHh-hheEEEEccCCcCC
Confidence 1 11357899999999999998654 6 99999999999999999999999 99999999865433
Q ss_pred CCCchhhHHHHHhhhhhhhhcccccC-------Cc------cccccc-ccCChHHHHHHhcCCCCc--------------
Q 020633 170 ENMKPSKLHLFMYGLLFGLADTWAAM-------PD------NKMVGK-AIKDPEKLKVIASNPRRY-------------- 221 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~-~~~~~~~~~~~~~~~~~~-------------- 221 (323)
..... +. ......+... ..+... +. ...... ..........+.......
T Consensus 166 ~~~~~-~~-~~~~~~~~~~-~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T TIGR01392 166 AWCIA-FN-EVQRQAILAD-PNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVE 242 (351)
T ss_pred HHHHH-HH-HHHHHHHHhC-CCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHH
Confidence 21100 10 0000000000 000000 00 000000 000000000010000000
Q ss_pred ----------CCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEE
Q 020633 222 ----------TGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK 282 (323)
Q Consensus 222 ----------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
................. ++.+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++.+++
T Consensus 243 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~ 320 (351)
T TIGR01392 243 SYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLR 320 (351)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCc
Confidence 00000000000011111 124567889999999999999999999999999998 556554
Q ss_pred -----EecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 283 -----IYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 283 -----~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++||..++++|++ +.+.|.+||+
T Consensus 321 v~~~~i~~~~GH~~~le~p~~----~~~~l~~FL~ 351 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVETDQ----VEELIRGFLR 351 (351)
T ss_pred eEEEEeCCCCCcchhhcCHHH----HHHHHHHHhC
Confidence 5678999999877655 8888998874
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=196.30 Aligned_cols=270 Identities=20% Similarity=0.201 Sum_probs=167.3
Q ss_pred ceeEEEcCCC--cEEEEEecCCC------CCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcC-CCCC
Q 020633 31 GKKYFETPNG--KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGR-SDGI 100 (323)
Q Consensus 31 ~~~~~~~~~g--~l~~~~~~~~~------~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~-s~~~ 100 (323)
....+....| .+....++... ...+++||++|||+++.. .|+.....|.++ |+.|+++|++|+|. |..+
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~ 104 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP 104 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcCCCCC
Confidence 4455556666 56665555541 136899999999999666 999999988776 59999999999994 4445
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE---EccCcccCCCCCchhh-
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI---FSAPLFVIPENMKPSK- 176 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v---l~~~~~~~~~~~~~~~- 176 (323)
....++..++++-+..+......+ +++++|||+||.+|+.+|+.+|+. |++++ ++++.....+......
T Consensus 105 ~~~~y~~~~~v~~i~~~~~~~~~~------~~~lvghS~Gg~va~~~Aa~~P~~-V~~lv~~~~~~~~~~~~~~~~~~~~ 177 (326)
T KOG1454|consen 105 RGPLYTLRELVELIRRFVKEVFVE------PVSLVGHSLGGIVALKAAAYYPET-VDSLVLLDLLGPPVYSTPKGIKGLR 177 (326)
T ss_pred CCCceehhHHHHHHHHHHHhhcCc------ceEEEEeCcHHHHHHHHHHhCccc-ccceeeecccccccccCCcchhHHH
Confidence 555567777777777777766643 799999999999999999999999 99999 5555544332221110
Q ss_pred -HHHHHhhhhhhhhcccccCCcc--------cccccccC----ChHHHHHHhcCC-CCcCCCCchhHHHHHHHHHHHHHh
Q 020633 177 -LHLFMYGLLFGLADTWAAMPDN--------KMVGKAIK----DPEKLKVIASNP-RRYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
.............+.....+.. ........ ............ ........................
T Consensus 178 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T KOG1454|consen 178 RLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLS 257 (326)
T ss_pred HhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHH
Confidence 1111111111111111100000 00000000 000000000000 000000000000000000011234
Q ss_pred cCCCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 243 NFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++++. +|+|+++|++|.++|.+.+..+.+.+ +++++++++++||.+++++|++ ++..|..|+.+.
T Consensus 258 ~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~----~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 258 LIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEE----VAALLRSFIARL 324 (326)
T ss_pred hhccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHH----HHHHHHHHHHHh
Confidence 456665 99999999999999999999999988 8999999999999999766666 999999999765
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=195.42 Aligned_cols=260 Identities=17% Similarity=0.158 Sum_probs=154.7
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEK 109 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~ 109 (323)
..++...+| +|+|..+++++ +++|||+||++++.. .+ .+...+...+|+|+++|+||||.|..... ...+.++
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 456777788 99998887543 568999999876654 32 34445555679999999999999985432 2346788
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH----HHH-hhh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH----LFM-YGL 184 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~----~~~-~~~ 184 (323)
+++|+..+++++..+ +++++||||||.+++.++.++|++ |+++|++++....+.. ..+.. ..+ ...
T Consensus 81 ~~~dl~~l~~~l~~~------~~~lvG~S~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~ 151 (306)
T TIGR01249 81 LVADIEKLREKLGIK------NWLVFGGSWGSTLALAYAQTHPEV-VTGLVLRGIFLLREKE--WSWFYEGGASMIYPDA 151 (306)
T ss_pred HHHHHHHHHHHcCCC------CEEEEEECHHHHHHHHHHHHChHh-hhhheeeccccCCHHH--HHHHHhcchhhhCHHH
Confidence 899999988887643 799999999999999999999998 9999999876542210 00000 000 000
Q ss_pred hhhhhcccccC-----CcccccccccCC-hHH----HHHH---hc-CCCCcCC-------CCchh-HHHHHH---HH---
Q 020633 185 LFGLADTWAAM-----PDNKMVGKAIKD-PEK----LKVI---AS-NPRRYTG-------KPRVG-TMREIA---RV--- 236 (323)
Q Consensus 185 ~~~~~~~~~~~-----~~~~~~~~~~~~-~~~----~~~~---~~-~~~~~~~-------~~~~~-~~~~~~---~~--- 236 (323)
+..+....... ....+....... ... .... .. ....... .+... ....+. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
T TIGR01249 152 WQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKG 231 (306)
T ss_pred HHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhc
Confidence 00010000000 000000000000 000 0000 00 0000000 00000 001100 00
Q ss_pred ----HHHHHhcCCCC-CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHH
Q 020633 237 ----CQYIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 237 ----~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.......+.++ ++|+|+|+|++|.++|.+.++.+++.+ ++.++++++++||..+ .++..+.+.+.+.+|
T Consensus 232 ~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~---~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 232 FLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAF---DPNNLAALVHALETY 305 (306)
T ss_pred hhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCC---ChHHHHHHHHHHHHh
Confidence 01123455667 699999999999999999999999998 7889999999999987 234333344444433
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=193.53 Aligned_cols=233 Identities=17% Similarity=0.222 Sum_probs=145.1
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhhc-HHHHHHHHHhcCCCCCCCe
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAAS-SLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~~ 132 (323)
+|+||++||++++.. .|..+.+.|+ +||+|+++|+||+|.|..... ...++++.+++ +..+++.+. ..++
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG------IEPF 72 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC------CCeE
Confidence 378999999998877 8999999998 789999999999999975432 33477777777 666666653 3489
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH---Hhhhh-----hhhhcccccCCccccccc-
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF---MYGLL-----FGLADTWAAMPDNKMVGK- 203 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~- 203 (323)
+++|||+||.+++.++.++|+. |++++++++................ ....+ ..+...+... .....
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 148 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPER-VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQ---PLFASQ 148 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchh-eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcC---ceeeec
Confidence 9999999999999999999998 9999999876543321111000000 00000 0000000000 00000
Q ss_pred -ccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-----HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC
Q 020633 204 -AIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
................ ... ......... .......+.++++|+++++|++|..++ +..+.+.+.. +
T Consensus 149 ~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~ 220 (251)
T TIGR03695 149 KNLPPEQRQALRAKRLA-NNP----EGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--P 220 (251)
T ss_pred ccCChHHhHHHHHhccc-ccc----hHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--C
Confidence 0001111111111000 000 011111110 011234467789999999999998764 4556666666 7
Q ss_pred CccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+.++++++++||++++++|+. +.+.|.+|+
T Consensus 221 ~~~~~~~~~~gH~~~~e~~~~----~~~~i~~~l 250 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLENPEA----FAKILLAFL 250 (251)
T ss_pred CCcEEEEcCCCCCcCccChHH----HHHHHHHHh
Confidence 889999999999999877755 888888887
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=196.75 Aligned_cols=247 Identities=15% Similarity=0.161 Sum_probs=161.9
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
.+...+++.++..+| +|.++.+.|...++.|+||++||+++.....|..+++.|+++||.|+++|+||+|.|......
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~- 242 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT- 242 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-
Confidence 344567888999999 999999988654667888888887765433678888999999999999999999999653211
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+.... ...+++++.....++..+++++|||+||++++.+|..+|++ ++++|+++|+...... .......+...
T Consensus 243 ~d~~~~---~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~r-i~a~V~~~~~~~~~~~--~~~~~~~~p~~ 316 (414)
T PRK05077 243 QDSSLL---HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPR-LKAVACLGPVVHTLLT--DPKRQQQVPEM 316 (414)
T ss_pred ccHHHH---HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcC-ceEEEEECCccchhhc--chhhhhhchHH
Confidence 122222 24566777665444567999999999999999999998988 9999999887531100 00000000000
Q ss_pred hhh-hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcC-CCCCcCEEEEeeCCCccc
Q 020633 185 LFG-LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF-SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~~ 262 (323)
... +....... ..........+.. + .......+ .++++|+|+|+|++|.++
T Consensus 317 ~~~~la~~lg~~--------~~~~~~l~~~l~~----~---------------sl~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 317 YLDVLASRLGMH--------DASDEALRVELNR----Y---------------SLKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHHHHhCCC--------CCChHHHHHHhhh----c---------------cchhhhhhccCCCCcEEEEecCCCCCC
Confidence 000 00000000 0000000000000 0 00001111 568999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+.++.+.+.. ++.++++++++ .+++ ..+++++.+.+||++++
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~e----~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVYR----NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---CccC----CHHHHHHHHHHHHHHHh
Confidence 999999888777 78999999986 2322 34569999999998875
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=192.35 Aligned_cols=246 Identities=17% Similarity=0.130 Sum_probs=140.9
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH----HHhhcHHHHHHHHHhcCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME----KVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~----~~~~d~~~~l~~l~~~~~~~ 128 (323)
..+|+|||+||++++.. .|...+..|.++ |+|+++|+||||.|+.......+.+ .+++++.++++.+.
T Consensus 103 ~~~p~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~------ 174 (402)
T PLN02894 103 EDAPTLVMVHGYGASQG-FFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN------ 174 (402)
T ss_pred CCCCEEEEECCCCcchh-HHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC------
Confidence 45789999999998776 677777888765 9999999999999975432211222 23455555555443
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH--------HHhhhh--hhhhcccccC---
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--------FMYGLL--FGLADTWAAM--- 195 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~--- 195 (323)
..+++++||||||.+++.+|.++|++ |+++|+++|............... .+...+ ..+.+.....
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 253 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPEH-VQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLG 253 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCchh-hcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhcc
Confidence 34899999999999999999999998 999999988654322111100000 000000 0000000000
Q ss_pred C---------ccccccc-----ccCChH---HHHHHhcCCCCcCCCCchhHHHHHH-----HHHHHHHhcCCCCCcCEEE
Q 020633 196 P---------DNKMVGK-----AIKDPE---KLKVIASNPRRYTGKPRVGTMREIA-----RVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 196 ~---------~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~ 253 (323)
+ ....... ...... ..+.+... .............. ....+....+.++++|+++
T Consensus 254 p~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~li 330 (402)
T PLN02894 254 PWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHT---LAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTF 330 (402)
T ss_pred chhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHh---hcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEE
Confidence 0 0000000 000000 00000000 00000000000000 0012234567889999999
Q ss_pred EeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+|++|.+.+ .....+.+... ..+++++++++||+.++++|+. +++.+.+|++..+.
T Consensus 331 I~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~----f~~~l~~~~~~~~~ 387 (402)
T PLN02894 331 IYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSG----FHSAVLYACRKYLS 387 (402)
T ss_pred EEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHH----HHHHHHHHHHHhcc
Confidence 9999998765 55556666552 3588999999999999888877 56666666655543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=190.85 Aligned_cols=281 Identities=11% Similarity=0.093 Sum_probs=165.4
Q ss_pred cCcccceeEEEcCCC-cEEEEEec-CCCCCcceEEEEecCCCCCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFL-PLDQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~-~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..+......+.+.|| .+.+.... +....++|+||++||++++... ....+++.|.++||+|+++|+||||.+.....
T Consensus 27 ~~~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 27 VLFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred CCCCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc
Confidence 345666777899999 76654432 2222457899999999876432 34668899999999999999999997754322
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-ceeEEEEccCcccCCCCCch---h---
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIPENMKP---S--- 175 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~vl~~~~~~~~~~~~~---~--- 175 (323)
..+. ....+|+..+++++....+ ..+++++||||||.+++.++.++++. .++++|+++++......... .
T Consensus 107 ~~~~-~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~ 183 (324)
T PRK10985 107 RIYH-SGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSR 183 (324)
T ss_pred ceEC-CCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHH
Confidence 1112 2246888888888887654 56899999999999988888876543 37888888886543211100 0
Q ss_pred hHHHHHhhhhhhhh-cccccCCcccccc--cccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 176 KLHLFMYGLLFGLA-DTWAAMPDNKMVG--KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.....+...+.... ............. .........++......... ......+.+.... ....++++++|++
T Consensus 184 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~~~-~~~~l~~i~~P~l 259 (324)
T PRK10985 184 VYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQCS-ALPLLNQIRKPTL 259 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHHCC-hHHHHhCCCCCEE
Confidence 00000000000000 0000000000000 00000000111000011111 1112222222222 3456788999999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCc-hhHHHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD-ENANLVLKDMREWIDERV 315 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~~ 315 (323)
+|+|++|++++.+....+.+.. ++.++++++++||+.+++..- ......-+.+.+|++...
T Consensus 260 ii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred EEecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 9999999999988777776555 678999999999999976431 112346677888887654
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=201.54 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=153.3
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
++ +++|..+++++ +++|||+||++++.. .|..+...|.+. |+|+++|+||||.|..... ..+++++++++..+
T Consensus 117 ~~~~i~~~~~g~~~---~~~vl~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~ 190 (371)
T PRK14875 117 GGRTVRYLRLGEGD---GTPVVLIHGFGGDLN-NWLFNHAALAAG-RPVIALDLPGHGASSKAVG-AGSLDELAAAVLAF 190 (371)
T ss_pred cCcEEEEecccCCC---CCeEEEECCCCCccc-hHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHH
Confidence 45 78887776543 689999999998887 888888888765 9999999999999964433 34889999999998
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh--hhhhhcccccC
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL--LFGLADTWAAM 195 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 195 (323)
++.+.. .+++++|||+||.+++.+|..+|++ ++++|++++........ ..+ ...+... ...+.......
T Consensus 191 ~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~~~~-v~~lv~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 191 LDALGI------ERAHLVGHSMGGAVALRLAARAPQR-VASLTLIAPAGLGPEIN-GDY-IDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHhcCC------ccEEEEeechHHHHHHHHHHhCchh-eeEEEEECcCCcCcccc-hhH-HHHhhcccchhHHHHHHHHH
Confidence 887653 3799999999999999999999988 99999998764322111 100 0000000 00000000000
Q ss_pred CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-------HHHHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
... ................... ........+... ..+....+.++++|+|+++|++|.++|.+..+
T Consensus 262 ~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~ 334 (371)
T PRK14875 262 FAD---PALVTRQMVEDLLKYKRLD----GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ 334 (371)
T ss_pred hcC---hhhCCHHHHHHHHHHhccc----cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHh
Confidence 000 0000000000111000000 000000000000 01133456678999999999999999977654
Q ss_pred HHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 269 LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+. .+.++.+++++||+.++++|+. +.+.|.+||++
T Consensus 335 ~l~-----~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 370 (371)
T PRK14875 335 GLP-----DGVAVHVLPGAGHMPQMEAAAD----VNRLLAEFLGK 370 (371)
T ss_pred hcc-----CCCeEEEeCCCCCChhhhCHHH----HHHHHHHHhcc
Confidence 432 4678999999999999776654 88888899864
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-26 Score=178.83 Aligned_cols=255 Identities=15% Similarity=0.189 Sum_probs=156.1
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCC----ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD----TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+.+...+.+|....+.|.+ ..++.||++||++.. .. .+..+++.|+++||.|+++|+||||.|.+.. .++
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~ 78 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGF 78 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCH
Confidence 34454443389888888875 345678878876532 22 4667889999999999999999999997542 367
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+.+.+|+.++++++....+ ...+++++|||+||.+++.++.. +.. |+++|+++|+......................
T Consensus 79 ~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~-v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T TIGR03100 79 EGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLR-VAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS 155 (274)
T ss_pred HHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCC-ccEEEEECCccCCcccchHHHHHHHHHHHHhC
Confidence 8888999999999976531 13479999999999999998765 445 99999999875432211111100000000000
Q ss_pred hhcccccCCcccccccccCCh-HHHHHHh----cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 188 LADTWAAMPDNKMVGKAIKDP-EKLKVIA----SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
. ..+.. ......... ....+.. ..+.. ...... ....++...+..+++|+++++|+.|...
T Consensus 156 ~-~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~l~~~~~P~ll~~g~~D~~~ 221 (274)
T TIGR03100 156 A-DFWRK-----LLSGEVNLGSSLRGLGDALLKARQKG--DEVAHG------GLAERMKAGLERFQGPVLFILSGNDLTA 221 (274)
T ss_pred h-HHHHH-----hcCCCccHHHHHHHHHHHHHhhhhcC--CCcccc------hHHHHHHHHHHhcCCcEEEEEcCcchhH
Confidence 0 00000 000000000 0011110 00000 000000 0222244556667999999999999876
Q ss_pred CchhH------HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 263 CPTSS------KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 263 ~~~~~------~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ +.. ....+.+..++++++.+++++|++. .+...+++.+.|.+||+
T Consensus 222 ~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~---~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 222 Q-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFS---DRVWREWVAARTTEWLR 273 (274)
T ss_pred H-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccc---cHHHHHHHHHHHHHHHh
Confidence 3 221 3344445457899999999999886 25556889999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=220.10 Aligned_cols=244 Identities=16% Similarity=0.160 Sum_probs=154.4
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-------ccCCChHHHhhcHHHHHHHHHhcCC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-------CYLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
.+++|||+||++++.. .|..+...|.+. |+|+++|+||||.|.... ...++++.+++++.++++++..
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~--- 1444 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP--- 1444 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC---
Confidence 4689999999999888 899999999765 999999999999997432 1234788999999999988764
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH---HHhhhh-----hhhhcccccCCcc
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL---FMYGLL-----FGLADTWAAMPDN 198 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~ 198 (323)
++++|+||||||.+++.++.++|++ |+++|++++............... .....+ ..+...+.. .
T Consensus 1445 ---~~v~LvGhSmGG~iAl~~A~~~P~~-V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~ 1517 (1655)
T PLN02980 1445 ---GKVTLVGYSMGARIALYMALRFSDK-IEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYS---G 1517 (1655)
T ss_pred ---CCEEEEEECHHHHHHHHHHHhChHh-hCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhcc---H
Confidence 3899999999999999999999999 999999886543321110000000 000000 000000000 0
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-----HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-----CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.........+........... . ............ ..+..+.+.++++|+|+|+|++|..++ +.++++.+.
T Consensus 1518 ~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~ 1592 (1655)
T PLN02980 1518 ELWKSLRNHPHFNKIVASRLL---H-KDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYRE 1592 (1655)
T ss_pred HHhhhhccCHHHHHHHHHHHh---c-CCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHH
Confidence 000000000111111110000 0 000011111111 112345678899999999999999875 566677776
Q ss_pred cCCC----------CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 274 ASSA----------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 274 ~~~~----------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+... .+++++++++||.+++++|+. +.+.|.+||++....+
T Consensus 1593 i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~----f~~~I~~FL~~~~~~~ 1643 (1655)
T PLN02980 1593 IGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLP----VIRALRKFLTRLHNSS 1643 (1655)
T ss_pred ccccccccccccccceEEEEECCCCCchHHHCHHH----HHHHHHHHHHhccccC
Confidence 6321 258999999999999877765 9999999999865443
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=165.25 Aligned_cols=238 Identities=17% Similarity=0.203 Sum_probs=180.9
Q ss_pred ccccccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHH-hhCCcEEEEecCCCCcCCC
Q 020633 21 EYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISF-ATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l-~~~g~~v~~~d~~G~G~s~ 98 (323)
..++..+++++++.+.+.|. +|+.+....+ .++|+++++|+..++.+ ..-.+++-+ ..-+..|+.+++||+|.|.
T Consensus 45 ptP~~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 45 PTPKEFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred CCccccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 34567799999999999999 9998887744 57999999999999877 444555544 3347999999999999998
Q ss_pred CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH
Q 020633 99 GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
+.+ +-+.+.-|..++++++..+...+..++++.|.|+||.+|..+|++..++ +.++|+-+++.+.+....+...
T Consensus 122 Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r-i~~~ivENTF~SIp~~~i~~v~- 195 (300)
T KOG4391|consen 122 GSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR-ISAIIVENTFLSIPHMAIPLVF- 195 (300)
T ss_pred CCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh-eeeeeeechhccchhhhhheec-
Confidence 875 4466778899999999998877888999999999999999999999998 9999999988776432211000
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
....+..+.+ ..+..-.....+.+.+.|.|++.|.+
T Consensus 196 ----p~~~k~i~~l----------------------------------------c~kn~~~S~~ki~~~~~P~LFiSGlk 231 (300)
T KOG4391|consen 196 ----PFPMKYIPLL----------------------------------------CYKNKWLSYRKIGQCRMPFLFISGLK 231 (300)
T ss_pred ----cchhhHHHHH----------------------------------------HHHhhhcchhhhccccCceEEeecCc
Confidence 0000000000 00000001223445689999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+||+...+.+++..++...++..+|++.|...+.. +-.++.|.+||.+...
T Consensus 232 DelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-----dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 232 DELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-----DGYFQAIEDFLAEVVK 284 (300)
T ss_pred cccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-----ccHHHHHHHHHHHhcc
Confidence 9999999999999999888899999999999876432 3388999999988754
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=174.51 Aligned_cols=259 Identities=16% Similarity=0.158 Sum_probs=171.9
Q ss_pred cEEEEEe-cCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 41 KLFTQSF-LPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~-~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
++.|..+ ...+....|+++++||+.++.. .|..+...|+.. |-.|+++|.|.||.|+..... +...+++|+..+|
T Consensus 37 ~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~Fi 113 (315)
T KOG2382|consen 37 RLAYDSVYSSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLFI 113 (315)
T ss_pred ccceeeeecccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHHH
Confidence 4666655 4444467899999999999987 999999999876 789999999999999876554 7899999999999
Q ss_pred HHHHhcCCCCCCCeEEEEechhH-HHHHHHhhhcCCCceeEEEEccCccc-CCCCCchhhHHHHHhhhhhhhhcc----c
Q 020633 119 KHVRDSEPYRDLPGFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFV-IPENMKPSKLHLFMYGLLFGLADT----W 192 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~vl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~ 192 (323)
+..+.... ..+++++|||||| .+++..+...|+. +..+|++.-... ....... ...+...+...... .
T Consensus 114 ~~v~~~~~--~~~~~l~GHsmGG~~~~m~~t~~~p~~-~~rliv~D~sP~~~~~~~~e---~~e~i~~m~~~d~~~~~~~ 187 (315)
T KOG2382|consen 114 DGVGGSTR--LDPVVLLGHSMGGVKVAMAETLKKPDL-IERLIVEDISPGGVGRSYGE---YRELIKAMIQLDLSIGVSR 187 (315)
T ss_pred HHcccccc--cCCceecccCcchHHHHHHHHHhcCcc-cceeEEEecCCccCCcccch---HHHHHHHHHhccccccccc
Confidence 99974321 4489999999999 7778888889998 777777543322 1111111 11111111111111 0
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCC------CCchhHHHHHHHHH--HHHHhcC--CCCCcCEEEEeeCCCccc
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTG------KPRVGTMREIARVC--QYIQDNF--SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~--~~~~~P~l~i~g~~D~~~ 262 (323)
........+.....+....+++..+...-.. ...+....++.... ..+...+ .....||+++.|.++..+
T Consensus 188 ~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv 267 (315)
T KOG2382|consen 188 GRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFV 267 (315)
T ss_pred cHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCc
Confidence 0000011111223344444455444432111 12222233333221 1112222 556889999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+...++.+.+ ++++++.++++||+.+.|+|++ +.+.|.+|+.++
T Consensus 268 ~~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~----~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 268 PDEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEE----FIESISEFLEEP 313 (315)
T ss_pred ChhHHHHHHHhc--cchheeecccCCceeecCCHHH----HHHHHHHHhccc
Confidence 999989998888 8899999999999999888877 888888888764
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-25 Score=170.75 Aligned_cols=211 Identities=16% Similarity=0.142 Sum_probs=135.9
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-c-CC----ChHHHhhcHHHHHHHHHhcCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-Y-LG----DMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~-~~----~~~~~~~d~~~~l~~l~~~~~ 126 (323)
++.|+||++||++++.. .|..++..|+++||.|+++|+||||.+..... . .. ......+|+.++++++.....
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45789999999988776 78889999999999999999999997642111 1 00 112335677778888776544
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEE-EEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccccccc
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGL-IFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++..+++++|||+||.+++.++.++|+ +.+. +++++... ....... .+.. . ....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~~~~~~~~-----------~~~~~~~---~~~~---~----~~~~- 159 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW--VKCVASLMGSGYF-----------TSLARTL---FPPL---I----PETA- 159 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC--eeEEEEeeCcHHH-----------HHHHHHh---cccc---c----cccc-
Confidence 456799999999999999999998887 4444 33332110 0000000 0000 0 0000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCC-CcCEEEEeeCCCcccCchhHHHHHHHcCCC----C
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSA----D 278 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~ 278 (323)
.. ............ +....+.++ ++|+|+++|++|.++|++.++.+.+.+... +
T Consensus 160 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~ 220 (249)
T PRK10566 160 AQ-------------------QAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKN 220 (249)
T ss_pred cc-------------------HHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcc
Confidence 00 000000000000 012234455 689999999999999999999998887432 3
Q ss_pred ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++++++++||.+. . ...+.+.+||++++
T Consensus 221 ~~~~~~~~~~H~~~----~----~~~~~~~~fl~~~~ 249 (249)
T PRK10566 221 LTCLWEPGVRHRIT----P----EALDAGVAFFRQHL 249 (249)
T ss_pred eEEEecCCCCCccC----H----HHHHHHHHHHHhhC
Confidence 57788999999865 2 26789999998753
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=194.80 Aligned_cols=264 Identities=13% Similarity=0.089 Sum_probs=153.5
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChHHH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDMEKV 110 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 110 (323)
..+...+| +|+|..+++.+ +|+|||+||++++.. .|..+.+.| ..||+|+++|+||||.|+... ...++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~---~~~ivllHG~~~~~~-~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD---RPTVVLVHGYPDNHE-VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC---CCeEEEEcCCCchHH-HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 34455678 99999988643 689999999998877 899999999 457999999999999997543 234589999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCcccCC------CCC---chhhHHH
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIP------ENM---KPSKLHL 179 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~~~------~~~---~~~~~~~ 179 (323)
++|+..+++++... .+++|+||||||.+++.++... +.. +..++.++++.... ... .......
T Consensus 80 a~dl~~~i~~l~~~-----~~~~lvGhS~Gg~~a~~~a~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 80 ADDFAAVIDAVSPD-----RPVHLLAHDWGSIQGWEAVTRPRAAGR-IASFTSVSGPSLDHVGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHhCCC-----CcEEEEecChHHHHHHHHHhCccchhh-hhhheeccCCchHHHHHHHhhcccccchhhhhH
Confidence 99999999998643 2599999999999998887662 333 44444433221100 000 0000000
Q ss_pred HHhhhhhhhhcc-cccCCcccccccccCChHHHHHHhcCCCCcCCCCc--------hhHHHHHHHHH--HHHHhcCCCCC
Q 020633 180 FMYGLLFGLADT-WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR--------VGTMREIARVC--QYIQDNFSKVT 248 (323)
Q Consensus 180 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~ 248 (323)
............ ................................... ........... .........++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTD 233 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCcc
Confidence 000000000000 00000000000000000011111100000000000 00000000000 00112345589
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+|+++|+|++|.++|.+..+.+.+.+ ++.++++++ +||+.++++|++ +.+.|.+|+.+.
T Consensus 234 ~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~~~ 292 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQV----LAAAVAEFVDAV 292 (582)
T ss_pred CceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhH----HHHHHHHHHHhc
Confidence 99999999999999998888887776 667777776 699999877766 888888998764
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=177.72 Aligned_cols=274 Identities=13% Similarity=0.065 Sum_probs=164.6
Q ss_pred cceeEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCcccc-----HHHHHHHHhhCCcEEEEecCCCCcCCCCCccc
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWM-----FQKICISFATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
.+...+...++.+..+.|.+..+ ..+++||++||+..+.. . ++.+++.|+++||+|+++|++|+|.+...
T Consensus 36 ~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~--- 111 (350)
T TIGR01836 36 VTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY--- 111 (350)
T ss_pred CCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---
Confidence 34444555555455555666431 34568999999854322 3 36799999999999999999999987532
Q ss_pred CCChHHHhh-cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH----
Q 020633 104 LGDMEKVAA-SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---- 178 (323)
Q Consensus 104 ~~~~~~~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~---- 178 (323)
.++++++. ++.++++++....+ ..+++++||||||.+++.++..+|++ |+++|+++++.............
T Consensus 112 -~~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~-v~~lv~~~~p~~~~~~~~~~~~~~~~~ 187 (350)
T TIGR01836 112 -LTLDDYINGYIDKCVDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDK-IKNLVTMVTPVDFETPGNMLSNWARHV 187 (350)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchh-eeeEEEeccccccCCCCchhhhhcccc
Confidence 26777764 48888888877654 56899999999999999999999988 99999999887654322111000
Q ss_pred --HHHhhhhhhhhcc------cc-cCCcccccc------cccCChHH-HHHHhc-CCCCcCCCCchhHHHHHHHHH----
Q 020633 179 --LFMYGLLFGLADT------WA-AMPDNKMVG------KAIKDPEK-LKVIAS-NPRRYTGKPRVGTMREIARVC---- 237 (323)
Q Consensus 179 --~~~~~~~~~~~~~------~~-~~~~~~~~~------~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~---- 237 (323)
......... .+. +. ..+...... ....++.. ...... ...............++....
T Consensus 188 ~~~~~~~~~~~-~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 188 DIDLAVDTMGN-IPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred CHHHHHHhcCC-CCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence 000000000 000 00 000000000 00011111 111000 000000001111112221111
Q ss_pred HHH---------HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHH
Q 020633 238 QYI---------QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 238 ~~~---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
... ...+.++++|+++++|++|.++|++.++.+.+.+.+.+.++++++ +||...+..+. ..+++++.|.
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~-~~~~v~~~i~ 344 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGK-AQKEVPPAIG 344 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECch-hHhhhhHHHH
Confidence 000 113567899999999999999999999999998865567778887 68988866553 4677999999
Q ss_pred HHHHHH
Q 020633 309 EWIDER 314 (323)
Q Consensus 309 ~fl~~~ 314 (323)
+||.++
T Consensus 345 ~wl~~~ 350 (350)
T TIGR01836 345 KWLQAR 350 (350)
T ss_pred HHHHhC
Confidence 999763
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=175.01 Aligned_cols=290 Identities=13% Similarity=0.140 Sum_probs=172.6
Q ss_pred ccccccCcccceeEEEcCCC-cEEEEEecCCC----CCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEEEe
Q 020633 21 EYYTSQGVRNGKKYFETPNG-KLFTQSFLPLD----QKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVFAA 89 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~ 89 (323)
++....+.+.+++.+++.|| .|......+.+ ..++++||++||+++++. .| +.++..|+++||+|+++
T Consensus 35 ~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~ 113 (395)
T PLN02872 35 QLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVG 113 (395)
T ss_pred HHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCcccc
Confidence 34557899999999999999 88887765332 134689999999987655 44 34666788999999999
Q ss_pred cCCCCcCCCCC-------cc-cCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC--ceeE
Q 020633 90 DLLGHGRSDGI-------RC-YLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN--TWTG 158 (323)
Q Consensus 90 d~~G~G~s~~~-------~~-~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~ 158 (323)
|+||++.|.+. .. ...++++++ .|+.++++++.... ..+++++|||+||.+++.++ .+|+. +|+.
T Consensus 114 n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~ 189 (395)
T PLN02872 114 NVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEA 189 (395)
T ss_pred cccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHH
Confidence 99998866321 11 124678888 89999999986532 45899999999999998555 56652 2888
Q ss_pred EEEccCcccCCCCCchhhHH-HH-HhhhhhhhhcccccCCccccc----ccccCCh----HHHHHHhcCCCC--------
Q 020633 159 LIFSAPLFVIPENMKPSKLH-LF-MYGLLFGLADTWAAMPDNKMV----GKAIKDP----EKLKVIASNPRR-------- 220 (323)
Q Consensus 159 ~vl~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~-------- 220 (323)
+++++|.........+.... .. ....+..........+..... ....... .....+......
T Consensus 190 ~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~ 269 (395)
T PLN02872 190 AALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDY 269 (395)
T ss_pred HHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhH
Confidence 88888876543322221100 00 000000000000000000000 0000000 000000000000
Q ss_pred ----cCCCCchhHHHHHHHHH----------------H------HHHhcCCCC--CcCEEEEeeCCCcccCchhHHHHHH
Q 020633 221 ----YTGKPRVGTMREIARVC----------------Q------YIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 221 ----~~~~~~~~~~~~~~~~~----------------~------~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
.....+...+..+.... . ...-.++++ ++|+++++|++|.+++++.++.+.+
T Consensus 270 ~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~ 349 (395)
T PLN02872 270 YLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLA 349 (395)
T ss_pred HHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHH
Confidence 00000111111111100 0 001135666 5899999999999999999999999
Q ss_pred HcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.. ..+++.+++++|..++- .++..+.+.+.|.+||++..+.
T Consensus 350 ~Lp~-~~~l~~l~~~gH~dfi~-~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 350 ELPS-KPELLYLENYGHIDFLL-STSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred HCCC-ccEEEEcCCCCCHHHHh-CcchHHHHHHHHHHHHHHhhhc
Confidence 9842 25788899999974321 1345667999999999987654
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=161.42 Aligned_cols=287 Identities=13% Similarity=0.092 Sum_probs=173.7
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
...+.+++..+.++|| .+-.....++....+|.||++||+.|++. .+.+.+++.+.++||.|+++++||++.+.....
T Consensus 44 ~~~~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 44 KPKVAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred ccccccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 4567788889999999 66666666554466789999999976643 255778899999999999999999999875333
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHH-HHHHHhhhcCCCceeEEEEccCcccCCCCC---ch----
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA-ATMLMYFQSEPNTWTGLIFSAPLFVIPENM---KP---- 174 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~-~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~---~~---- 174 (323)
..+. .-+.+|+..++++++...+ ..++..+|.|+||. ++..++.+-.+..+.+.+.++.+.++.... ..
T Consensus 124 ~~yh-~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 124 RLYH-SGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL 200 (345)
T ss_pred ceec-ccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh
Confidence 3222 3334999999999998776 78999999999995 454444443333355665555444321100 00
Q ss_pred hhHHHHHhhhhhhhhcccccCCccccccc-ccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
......+...+.................. ...-.....+.+.+.........+....++++... ....+.+|.+|+|+
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS-s~~~L~~Ir~PtLi 279 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS-SLPLLPKIRKPTLI 279 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcc-ccccccccccceEE
Confidence 00011111111111100000000000000 00000011112222222222222333444444333 35678999999999
Q ss_pred EeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhH-HHHHHHHHHHHHHHHh
Q 020633 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA-NLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~-~~~~~~i~~fl~~~~~ 316 (323)
|++.+|++++++........ .++++.+..-+.+||..++....... ....+.+.+||+..+.
T Consensus 280 i~A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 280 INAKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EecCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999998776655543 34889999999999999987433222 2567788899987654
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=156.58 Aligned_cols=218 Identities=20% Similarity=0.263 Sum_probs=160.2
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+-...++..| .+....+.+.. ...+++++.||...+.+ ....+...|.. -++.++++|++|+|.|.+.+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---- 108 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---- 108 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCccc----
Confidence 34456677777 66666666664 45799999999966655 33334444544 2699999999999999987643
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
....+|+.++.++++.+++ ...+++|+|+|+|...++.+|.+.| ++++|+.+|+.+......+.
T Consensus 109 ~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~---~~alVL~SPf~S~~rv~~~~------------ 172 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP---LAAVVLHSPFTSGMRVAFPD------------ 172 (258)
T ss_pred ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC---cceEEEeccchhhhhhhccC------------
Confidence 3677999999999999985 5789999999999999999999988 78999999986532211100
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
....+.-..+ . ..+..+.++||+|++||++|.+++....
T Consensus 173 --------~~~~~~~d~f-----------------------------~----~i~kI~~i~~PVLiiHgtdDevv~~sHg 211 (258)
T KOG1552|consen 173 --------TKTTYCFDAF-----------------------------P----NIEKISKITCPVLIIHGTDDEVVDFSHG 211 (258)
T ss_pred --------cceEEeeccc-----------------------------c----ccCcceeccCCEEEEecccCceeccccc
Confidence 0000000000 0 1356678899999999999999999999
Q ss_pred HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+++..+. ..+-.++.|+||... +... ++.+.+..|+.....
T Consensus 212 ~~Lye~~k~-~~epl~v~g~gH~~~-~~~~----~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 212 KALYERCKE-KVEPLWVKGAGHNDI-ELYP----EYIEHLRRFISSVLP 254 (258)
T ss_pred HHHHHhccc-cCCCcEEecCCCccc-ccCH----HHHHHHHHHHHHhcc
Confidence 999999853 368899999999988 2222 378888888876544
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=175.56 Aligned_cols=260 Identities=12% Similarity=0.066 Sum_probs=158.3
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc------------ccHHHHHH---HHhhCCcEEEEecCCCCcCCCCC-----
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG------------WMFQKICI---SFATWGYAVFAADLLGHGRSDGI----- 100 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~----- 100 (323)
+|.|..||..+....++||++|++.+++. ..|..++- .|-...|.||++|..|-|.|+.+
T Consensus 42 ~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~t 121 (389)
T PRK06765 42 QMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITT 121 (389)
T ss_pred eEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCC
Confidence 78999999877566799999999987531 02444432 23334599999999987753210
Q ss_pred ---------------cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 101 ---------------RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 101 ---------------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
.....+++++++++..++++++.+ ++. ++||||||++++.+|.++|++ |+++|++++
T Consensus 122 gp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~------~~~~vvG~SmGG~ial~~a~~~P~~-v~~lv~ia~ 194 (389)
T PRK06765 122 GPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA------RLHAVMGPSMGGMQAQEWAVHYPHM-VERMIGVIG 194 (389)
T ss_pred CCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHh-hheEEEEec
Confidence 112358999999999999988765 675 999999999999999999999 999999987
Q ss_pred cccCCCCCchhhHHHHHhhhhhhhhcccccC-------Ccc------ccccc-ccCCh----------------------
Q 020633 165 LFVIPENMKPSKLHLFMYGLLFGLADTWAAM-------PDN------KMVGK-AIKDP---------------------- 208 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~-~~~~~---------------------- 208 (323)
............ .......+. ..+.|... +.. ..... .....
T Consensus 195 ~~~~~~~~~~~~-~~~~~~ai~-~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~ 272 (389)
T PRK06765 195 NPQNDAWTSVNV-LQNWAEAIR-LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVST 272 (389)
T ss_pred CCCCChhHHHHH-HHHHHHHHH-hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccc
Confidence 654332210000 000000000 00000000 000 00000 00000
Q ss_pred --HHHHHHhcCCCCcCCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC-
Q 020633 209 --EKLKVIASNPRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS- 276 (323)
Q Consensus 209 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 276 (323)
.....+......+........+..+.+..+ ++.+.+.++++|+|+|+|+.|.++|++..+.+.+.++.
T Consensus 273 ~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~ 352 (389)
T PRK06765 273 LTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ 352 (389)
T ss_pred hhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc
Confidence 000110000000111111111111111111 23456778999999999999999999999988888842
Q ss_pred -CCccEEEecC-CCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 277 -ADKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 277 -~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++++++++ +||..++++|+. +.+.|.+||++
T Consensus 353 ~~~a~l~~I~s~~GH~~~le~p~~----~~~~I~~FL~~ 387 (389)
T PRK06765 353 GKYAEVYEIESINGHMAGVFDIHL----FEKKIYEFLNR 387 (389)
T ss_pred CCCeEEEEECCCCCcchhhcCHHH----HHHHHHHHHcc
Confidence 3688999985 999999766665 88999999865
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=180.04 Aligned_cols=249 Identities=15% Similarity=0.127 Sum_probs=169.2
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCCCc---ceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCC--
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQKV---KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSD-- 98 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~---~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-- 98 (323)
...+.+.+.+...|| +|+++.+.|.+.++ .|+||++||++... .+.|....+.|+.+||.|+.+|+||.+.-.
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 345667889999999 99999999976432 48999999997432 235777888999999999999999764321
Q ss_pred -CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 99 -GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 99 -~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
.......--....+|+.+.++++.....++.++++++|+|+||++++.++.+.+ . +++.+...+..........
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~-f~a~~~~~~~~~~~~~~~~--- 515 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-R-FKAAVAVAGGVDWLLYFGE--- 515 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-h-hheEEeccCcchhhhhccc---
Confidence 110000012334577888888776666667789999999999999999999888 4 7777776654431110000
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
... .+.......... . .. ....+.... ......++++|+|+|||+
T Consensus 516 ------~~~----~~~~~~~~~~~~-~-~~-~~~~~~~~s----------------------p~~~~~~i~~P~LliHG~ 560 (620)
T COG1506 516 ------STE----GLRFDPEENGGG-P-PE-DREKYEDRS----------------------PIFYADNIKTPLLLIHGE 560 (620)
T ss_pred ------cch----hhcCCHHHhCCC-c-cc-ChHHHHhcC----------------------hhhhhcccCCCEEEEeec
Confidence 000 000000000000 0 00 000000000 234567889999999999
Q ss_pred CCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 258 ADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|..||.+++..+.+.+. +.+++++++|+.+|.+.- .+....+.+.+.+|++++++.
T Consensus 561 ~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 561 EDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHHHhcC
Confidence 999999999999998884 456799999999999983 466778999999999998753
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=147.74 Aligned_cols=235 Identities=13% Similarity=0.095 Sum_probs=156.2
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhc--
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAAS-- 113 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-- 113 (323)
.+| +|.|..+|.+. ..|+++.|.-++....|......|.+. .+.++++|.||+|.|.++.... ..+-+.+|
T Consensus 28 vng~ql~y~~~G~G~----~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~~~ff~~Da~ 102 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHGP----NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-EVQFFMKDAE 102 (277)
T ss_pred ecCceeeeeecCCCC----ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-hHHHHHHhHH
Confidence 356 99999999864 588999998777655777666666544 4899999999999998765543 44444444
Q ss_pred -HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 114 -SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 114 -~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
...+++.|+.+ ++.++|+|-||..|+..|+++++. |..+|+.++........... ...++.. ..|
T Consensus 103 ~avdLM~aLk~~------~fsvlGWSdGgiTalivAak~~e~-v~rmiiwga~ayvn~~~~ma------~kgiRdv-~kW 168 (277)
T KOG2984|consen 103 YAVDLMEALKLE------PFSVLGWSDGGITALIVAAKGKEK-VNRMIIWGAAAYVNHLGAMA------FKGIRDV-NKW 168 (277)
T ss_pred HHHHHHHHhCCC------CeeEeeecCCCeEEEEeeccChhh-hhhheeecccceecchhHHH------HhchHHH-hhh
Confidence 44555555543 899999999999999999999999 99999987765443221110 0000000 001
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH---------HHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC---------QYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
.....+.+ ...+..+.... .+..+.... +-.+..+.+++||+|+++|+.|++++
T Consensus 169 s~r~R~P~-e~~Yg~e~f~~----------------~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~ 231 (277)
T KOG2984|consen 169 SARGRQPY-EDHYGPETFRT----------------QWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCG 231 (277)
T ss_pred hhhhcchH-HHhcCHHHHHH----------------HHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCC
Confidence 00000000 00001110000 001111111 11345688999999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
...+-.+.... +.+++.+++.++|.+++ .++++++..+.+||++.
T Consensus 232 ~~hv~fi~~~~--~~a~~~~~peGkHn~hL----rya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 232 DPHVCFIPVLK--SLAKVEIHPEGKHNFHL----RYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCCccchhhhc--ccceEEEccCCCcceee----echHHHHHHHHHHHhcc
Confidence 99888887777 77899999999999994 56667999999999753
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=147.89 Aligned_cols=145 Identities=30% Similarity=0.487 Sum_probs=114.6
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
+||++||++++.. .|..+++.|+++||.|+.+|+|++|.+... .++.++++.+..... +..+++++|
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 6899999999877 799999999999999999999999987221 244445544322111 266999999
Q ss_pred echhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhc
Q 020633 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS 216 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (323)
||+||.+++.++.+. .+ ++++|++++...
T Consensus 68 ~S~Gg~~a~~~~~~~-~~-v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PR-VKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TT-ESEEEEESESSG-------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cc-eeEEEEecCccc-------------------------------------------------
Confidence 999999999999988 44 999999998311
Q ss_pred CCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 217 NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
.+.+.+.++|+++++|++|..++.+..+.+++.++ .+.+++++++++|+
T Consensus 97 ------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp ------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred ------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12234567799999999999999999999999985 46899999999995
|
... |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-22 Score=157.05 Aligned_cols=283 Identities=14% Similarity=0.127 Sum_probs=172.2
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCCC------CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQ------KVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~------~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
...+.+++..++.+|| .+...+..+... ...|+||++||+.+++. .+-+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 4567889999999999 998888866542 45799999999976653 355778888888999999999999998
Q ss_pred CCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCc--eeEEEEccCcccC--CCCC
Q 020633 97 SDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNT--WTGLIFSAPLFVI--PENM 172 (323)
Q Consensus 97 s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~--v~~~vl~~~~~~~--~~~~ 172 (323)
|.-.....+ -..+.+|+.+++++++.+++ ..++..+|.||||.+.+.|..+..+.. +.++.+.+|+-.. ....
T Consensus 168 ~~LtTpr~f-~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~ 244 (409)
T KOG1838|consen 168 SKLTTPRLF-TAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSI 244 (409)
T ss_pred CccCCCcee-ecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHH
Confidence 874433332 24457999999999999998 779999999999999999998854321 5556666665432 1110
Q ss_pred chh---hHH-HHHhhhhhhhhc-ccccCCcc-cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC
Q 020633 173 KPS---KLH-LFMYGLLFGLAD-TWAAMPDN-KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK 246 (323)
Q Consensus 173 ~~~---~~~-~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (323)
... +.. ..+...+.+... ........ .......+....+++.+.......+ +....++++... ....+.+
T Consensus 245 ~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~g---f~~~deYY~~aS-s~~~v~~ 320 (409)
T KOG1838|consen 245 ETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFG---FKSVDEYYKKAS-SSNYVDK 320 (409)
T ss_pred hcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcC---CCcHHHHHhhcc-hhhhccc
Confidence 000 000 011111111110 00000000 0000011111112222111111111 122333333322 4567889
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHH-HHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKD-MREWIDERV 315 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~-i~~fl~~~~ 315 (323)
|++|+|+|++.+|+++|.+..- ..+...++++-+++-..+||..+++.-........+. +.+|+....
T Consensus 321 I~VP~L~ina~DDPv~p~~~ip-~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEEAIP-IDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ccccEEEEecCCCCCCCcccCC-HHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 9999999999999999986433 2233345777788888899999987622122333343 777776544
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=168.33 Aligned_cols=263 Identities=10% Similarity=0.022 Sum_probs=155.3
Q ss_pred cccccCcccceeEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCccccHH-----HHHHHHhhCCcEEEEecCCCCc
Q 020633 22 YYTSQGVRNGKKYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQ-----KICISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G 95 (323)
|--...+..+...+...++.+..+.|.|... ..+++||++||+..... .++ .+++.|.++||+|+++|++|+|
T Consensus 154 f~vg~~~a~Tpg~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg 232 (532)
T TIGR01838 154 FEVGRNLATTPGAVVFENELFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPD 232 (532)
T ss_pred eeeCCCCCCCCCeEEEECCcEEEEEeCCCCCcCCCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCC
Confidence 3334455556656666666666667777642 25789999999974433 553 7999999999999999999999
Q ss_pred CCCCCcccCCChHHHhh-cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH----HHhhhc-CCCceeEEEEccCcccCC
Q 020633 96 RSDGIRCYLGDMEKVAA-SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM----LMYFQS-EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~~v~~~vl~~~~~~~~ 169 (323)
.+.... ++++++. ++.+.++.+....+ ..+++++||||||.++. .++... +++ |++++++++..++.
T Consensus 233 ~s~~~~----~~ddY~~~~i~~al~~v~~~~g--~~kv~lvG~cmGGtl~a~ala~~aa~~~~~r-v~slvll~t~~Df~ 305 (532)
T TIGR01838 233 ASQADK----TFDDYIRDGVIAALEVVEAITG--EKQVNCVGYCIGGTLLSTALAYLAARGDDKR-IKSATFFTTLLDFS 305 (532)
T ss_pred cccccC----ChhhhHHHHHHHHHHHHHHhcC--CCCeEEEEECcCcHHHHHHHHHHHHhCCCCc-cceEEEEecCcCCC
Confidence 885432 3445553 46666666654433 55899999999999852 244554 666 99999999887765
Q ss_pred CCCchhhHH-HHHhhhhhhhhcccccCCcccc---cccccCChH------------------HHHHHhcCCCCcCCCCch
Q 020633 170 ENMKPSKLH-LFMYGLLFGLADTWAAMPDNKM---VGKAIKDPE------------------KLKVIASNPRRYTGKPRV 227 (323)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 227 (323)
......... ......+..........+...+ +........ ....+..+...+ ..
T Consensus 306 ~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~l----P~ 381 (532)
T TIGR01838 306 DPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNL----PG 381 (532)
T ss_pred CcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccc----hH
Confidence 422111100 0000000000000000000000 000000000 000011111111 11
Q ss_pred hHHHHHHHHH----H---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 228 GTMREIARVC----Q---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 228 ~~~~~~~~~~----~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
....++.+.. . .....+.+|++|+++|.|++|.++|.+.+..+.+.+ ++.+..+++++||..+++
T Consensus 382 ~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 382 KMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVV 459 (532)
T ss_pred HHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhh
Confidence 1122221111 0 012356789999999999999999999999998888 577888999999999988
Q ss_pred CCch
Q 020633 295 EPDE 298 (323)
Q Consensus 295 ~~~~ 298 (323)
+|..
T Consensus 460 nPp~ 463 (532)
T TIGR01838 460 NPPS 463 (532)
T ss_pred CCCC
Confidence 7753
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-23 Score=148.60 Aligned_cols=126 Identities=19% Similarity=0.163 Sum_probs=98.9
Q ss_pred eEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 33 KYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
+.+...++++..+..++.. ...|.++++||+|.+.- .|..++..+... ..+|+++|+||||++.-......+.+.++
T Consensus 53 v~i~~~~~t~n~Y~t~~~~-t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~ 130 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSA-TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMS 130 (343)
T ss_pred cccCCCcceEEEEEecCCC-CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHH
Confidence 4444444456666666653 67899999999997766 899999988765 56789999999999987666667999999
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~ 165 (323)
.|+.++++.+-.+. ..+++|+||||||.+|.+.|.. -|. +.++++++-.
T Consensus 131 KD~~~~i~~~fge~---~~~iilVGHSmGGaIav~~a~~k~lps--l~Gl~viDVV 181 (343)
T KOG2564|consen 131 KDFGAVIKELFGEL---PPQIILVGHSMGGAIAVHTAASKTLPS--LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHhccC---CCceEEEeccccchhhhhhhhhhhchh--hhceEEEEEe
Confidence 99999999887543 5589999999999999887765 344 8888887643
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-22 Score=150.34 Aligned_cols=181 Identities=12% Similarity=0.065 Sum_probs=125.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc----------c---CCChHHHhhcHHHHHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC----------Y---LGDMEKVAASSLSFFK 119 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----------~---~~~~~~~~~d~~~~l~ 119 (323)
.++++||++||+|++.. .|..+++.|...++.+..++.+|...+..... . ...+....+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 56789999999999887 78899999987765556666666532211000 0 0012333445556666
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNK 199 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (323)
++..+..++..+++++|||+||.+++.++..+|+. +.+++.+++.....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~-~~~vv~~sg~~~~~------------------------------ 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGL-AGRVIAFSGRYASL------------------------------ 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc-ceEEEEeccccccc------------------------------
Confidence 66666555567899999999999999999888886 77777665421100
Q ss_pred ccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CC
Q 020633 200 MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SA 277 (323)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 277 (323)
......++|+++++|++|.++|.+.++.+.+.+. +.
T Consensus 142 ------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 142 ------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred ------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 0001136799999999999999999988888774 23
Q ss_pred CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++++++++||.+. .+ ..+.+.+||.+.+
T Consensus 180 ~~~~~~~~~~gH~i~----~~----~~~~~~~~l~~~l 209 (232)
T PRK11460 180 DVTLDIVEDLGHAID----PR----LMQFALDRLRYTV 209 (232)
T ss_pred CeEEEEECCCCCCCC----HH----HHHHHHHHHHHHc
Confidence 568888999999987 44 4555566665554
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=146.52 Aligned_cols=183 Identities=13% Similarity=0.059 Sum_probs=118.3
Q ss_pred eEEEEecCCCCCccccHH--HHHHHHhh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 56 ATVYMTHGYGSDTGWMFQ--KICISFAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~--~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
|+||++||++++.. .|. .+.+.|.+ .+|+|+++|+||++ ++.++++.++++.+.. .+
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~------~~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGG------DP 62 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCC------CC
Confidence 58999999998876 555 34566654 26999999999884 3456777777776543 38
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++||||||.+++.+|.++|. .+|+++|..... ..+...+.... . .....
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~----~~vl~~~~~~~~---------~~~~~~~~~~~-~-------~~~~~-------- 113 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFML----PAVVVNPAVRPF---------ELLTDYLGENE-N-------PYTGQ-------- 113 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCC----CEEEECCCCCHH---------HHHHHhcCCcc-c-------ccCCC--------
Confidence 9999999999999999999884 257788754310 11111000000 0 00000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
. .............. ...+. ..+|+++++|++|.++|++.+..+++. ++.++++|++|.
T Consensus 114 ------------~--~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~ 173 (190)
T PRK11071 114 ------------Q--YVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHA 173 (190)
T ss_pred ------------c--EEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcc
Confidence 0 00000111111101 11122 577889999999999999999998874 356788999999
Q ss_pred cccCCCchhHHHHHHHHHHHHH
Q 020633 291 LIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+. . .+++.+.+.+|+.
T Consensus 174 f~----~--~~~~~~~i~~fl~ 189 (190)
T PRK11071 174 FV----G--FERYFNQIVDFLG 189 (190)
T ss_pred hh----h--HHHhHHHHHHHhc
Confidence 86 2 2668888998874
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=152.25 Aligned_cols=201 Identities=18% Similarity=0.168 Sum_probs=139.2
Q ss_pred EEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcC-CCCCccc-C--------CChHHHhh
Q 020633 43 FTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGR-SDGIRCY-L--------GDMEKVAA 112 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~~~~-~--------~~~~~~~~ 112 (323)
..++..|.+.+++|.||++|++.|-.. ..+.+++.|+++||.|+++|+-+-.. ....... . ...+....
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 456777776457899999999988766 77889999999999999999864433 1111100 0 01345668
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
++.+.++++......+..+|.++|+|+||.+++.++... .. ++++|...|..... .
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~-~~a~v~~yg~~~~~----~------------------ 136 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PR-VDAAVSFYGGSPPP----P------------------ 136 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TT-SSEEEEES-SSSGG----G------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cc-cceEEEEcCCCCCC----c------------------
Confidence 888889999887644567999999999999999999887 44 89998887611000 0
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
......++++|+++++|++|+.++.+..+.+.+
T Consensus 137 -----------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 137 -----------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp -----------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred -----------------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 123456789999999999999999998888877
Q ss_pred Hc--CCCCccEEEecCCCcccccCCCc----hhHHHHHHHHHHHHHHHH
Q 020633 273 KA--SSADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDERV 315 (323)
Q Consensus 273 ~~--~~~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~~ 315 (323)
.+ .+...++++|+|++|.+...... ...++.++.+.+||++++
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 77 24568999999999999855443 456778889999998764
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=153.42 Aligned_cols=132 Identities=17% Similarity=0.236 Sum_probs=107.5
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCc---cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDT---GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
..+++...|.+....+.|.+.+++++||++||++... ...|..+++.|+++||.|+++|+||||.|.+.... .+++
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~ 80 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWD 80 (266)
T ss_pred CEEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHH
Confidence 3566677777777777776545678999999998642 22567788999999999999999999999765432 3788
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
.+++|+..+++++.... ..+++|+||||||.+++.++.++|+. ++++|+++|....
T Consensus 81 ~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~-v~~lVL~~P~~~g 136 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAK-CNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccc-cceEEEeccccch
Confidence 89999999998887652 45899999999999999999999988 9999999987653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-22 Score=139.71 Aligned_cols=244 Identities=18% Similarity=0.259 Sum_probs=156.3
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+.+.++...+ ++....... ++..++|++||+-++... ....++..|.+.|+.++.+|++|.|.|.+.-.+ ...
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~t---gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~ 85 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHET---GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNY 85 (269)
T ss_pred eeEEEeccCCCchhhcceecc---CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Ccc
Confidence 34566666667 666544444 346899999999987642 445678889999999999999999999875433 356
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...++|+..+++++.... ..--+++|||-||.+++.++.++++ ++-+|.+++-++......... ....+.+
T Consensus 86 ~~eadDL~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRydl~~~I~eRl----g~~~l~~ 156 (269)
T KOG4667|consen 86 NTEADDLHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHD--IRNVINCSGRYDLKNGINERL----GEDYLER 156 (269)
T ss_pred cchHHHHHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcC--chheEEcccccchhcchhhhh----cccHHHH
Confidence 667799999999998642 1113589999999999999999988 778888877555332211000 0000000
Q ss_pred hhc-c-cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC--CcCEEEEeeCCCcccC
Q 020633 188 LAD-T-WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTC 263 (323)
Q Consensus 188 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~ 263 (323)
... . +...+.+. .+.......... .+...+..+...+| +||||-+||..|.+||
T Consensus 157 ike~Gfid~~~rkG--------------------~y~~rvt~eSlm--drLntd~h~aclkId~~C~VLTvhGs~D~IVP 214 (269)
T KOG4667|consen 157 IKEQGFIDVGPRKG--------------------KYGYRVTEESLM--DRLNTDIHEACLKIDKQCRVLTVHGSEDEIVP 214 (269)
T ss_pred HHhCCceecCcccC--------------------CcCceecHHHHH--HHHhchhhhhhcCcCccCceEEEeccCCceee
Confidence 000 0 00000000 000000001111 11111122333334 8999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+.++++.+ ++.++.++||++|..... ..+.......|.+.+.
T Consensus 215 ve~AkefAk~i--~nH~L~iIEgADHnyt~~-----q~~l~~lgl~f~k~r~ 259 (269)
T KOG4667|consen 215 VEDAKEFAKII--PNHKLEIIEGADHNYTGH-----QSQLVSLGLEFIKTRI 259 (269)
T ss_pred chhHHHHHHhc--cCCceEEecCCCcCccch-----hhhHhhhcceeEEeee
Confidence 99999999999 779999999999998732 2235555566655443
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-23 Score=153.51 Aligned_cols=203 Identities=16% Similarity=0.131 Sum_probs=136.2
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCc---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHH
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIR---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~ 147 (323)
.|......|+++||.|+.+|+||.+...... .....-...++|+.++++++.....++..++.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 3456677898999999999999987543110 0111224567999999999988877778899999999999999999
Q ss_pred hhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH-HHHhcCCCCcCCCCc
Q 020633 148 YFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPR 226 (323)
Q Consensus 148 a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 226 (323)
+.++|+. +++++..+|..+.......... ... ..... .....
T Consensus 82 ~~~~~~~-f~a~v~~~g~~d~~~~~~~~~~-------------------------------~~~~~~~~~-~~~~~---- 124 (213)
T PF00326_consen 82 ATQHPDR-FKAAVAGAGVSDLFSYYGTTDI-------------------------------YTKAEYLEY-GDPWD---- 124 (213)
T ss_dssp HHHTCCG-SSEEEEESE-SSTTCSBHHTCC-------------------------------HHHGHHHHH-SSTTT----
T ss_pred hccccee-eeeeeccceecchhcccccccc-------------------------------ccccccccc-Cccch----
Confidence 9989998 9999999987765433221100 000 00000 00000
Q ss_pred hhHHHHHHHHHHHHHhcCCC--CCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHH
Q 020633 227 VGTMREIARVCQYIQDNFSK--VTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANL 302 (323)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~ 302 (323)
......... ....+.+ +++|+|+++|++|..||++.+..+.+.+. +.++++++++++||.+. ..+....
T Consensus 125 ---~~~~~~~~s-~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~---~~~~~~~ 197 (213)
T PF00326_consen 125 ---NPEFYRELS-PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG---NPENRRD 197 (213)
T ss_dssp ---SHHHHHHHH-HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT---SHHHHHH
T ss_pred ---hhhhhhhhc-cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC---CchhHHH
Confidence 000111111 2233444 78999999999999999999999988874 34589999999999655 2345668
Q ss_pred HHHHHHHHHHHHHhh
Q 020633 303 VLKDMREWIDERVER 317 (323)
Q Consensus 303 ~~~~i~~fl~~~~~~ 317 (323)
..+.+.+||+++++.
T Consensus 198 ~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 198 WYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999998863
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-20 Score=142.03 Aligned_cols=213 Identities=17% Similarity=0.151 Sum_probs=165.9
Q ss_pred ceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCc--c----c
Q 020633 31 GKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIR--C----Y 103 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~--~----~ 103 (323)
+.+.+..+++++..+...|....+.|.||++|++.+-.. ..+.+++.|+..||.|+++|+-+. |.+.... . .
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred cceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 446677777789999999987555699999999998877 889999999999999999999874 3332111 0 0
Q ss_pred ----CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH
Q 020633 104 ----LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 104 ----~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~ 179 (323)
..+..+...|+.+.+++|.....++..+|.++|+||||.+++.++...|+ +++.+..-+......
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~--v~a~v~fyg~~~~~~--------- 150 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE--VKAAVAFYGGLIADD--------- 150 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC--ccEEEEecCCCCCCc---------
Confidence 11236778999999999998765567789999999999999999998874 899988776543110
Q ss_pred HHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCC
Q 020633 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
.....++++|+|++.|+.|
T Consensus 151 -------------------------------------------------------------~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 151 -------------------------------------------------------------TADAPKIKVPVLLHLAGED 169 (236)
T ss_pred -------------------------------------------------------------ccccccccCcEEEEecccC
Confidence 1123578999999999999
Q ss_pred cccCchhHHHHHHHcCCC--CccEEEecCCCcccccCC-------CchhHHHHHHHHHHHHHHHHh
Q 020633 260 GVTCPTSSKLLYEKASSA--DKSIKIYDGMYHSLIQGE-------PDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-------~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+|.+....+.+.+... .+++.+++++.|.++-.. .....+..++.+.+||++.+.
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 999998888887777533 578899999999988432 234677889999999998764
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-20 Score=143.10 Aligned_cols=228 Identities=15% Similarity=0.132 Sum_probs=133.8
Q ss_pred eeEEEcC-CC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHH--HHHHH-hhCCcEEEEecC--CCCcCCCCCc-
Q 020633 32 KKYFETP-NG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQK--ICISF-ATWGYAVFAADL--LGHGRSDGIR- 101 (323)
Q Consensus 32 ~~~~~~~-~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~--~~~~l-~~~g~~v~~~d~--~G~G~s~~~~- 101 (323)
...+.+. .+ ++.|.+|.|++ .++.|+|+++||++++.. .|.. ....+ .+.|+.|+++|. +|+|.+....
T Consensus 15 ~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~ 93 (275)
T TIGR02821 15 FYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDA 93 (275)
T ss_pred EEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccc
Confidence 3344443 33 88899999864 356799999999998765 4432 23344 456999999998 5555332100
Q ss_pred ------------------ccCCChHH-HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEc
Q 020633 102 ------------------CYLGDMEK-VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFS 162 (323)
Q Consensus 102 ------------------~~~~~~~~-~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~ 162 (323)
...+.... .++++..+++. ..+++..+++++||||||.+++.++.++|+. +++++++
T Consensus 94 w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~-~~~~~~~ 169 (275)
T TIGR02821 94 WDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA---QFPLDGERQGITGHSMGGHGALVIALKNPDR-FKSVSAF 169 (275)
T ss_pred ccccCCccccccCCcCcccccchHHHHHHHHHHHHHHh---hCCCCCCceEEEEEChhHHHHHHHHHhCccc-ceEEEEE
Confidence 00011122 23455444443 2233356899999999999999999999999 9999999
Q ss_pred cCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHh
Q 020633 163 APLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
+|....... .+... .....+..+...... .+... ...
T Consensus 170 ~~~~~~~~~---~~~~~-----------------------------~~~~~l~~~~~~~~~-------~~~~~----~~~ 206 (275)
T TIGR02821 170 APIVAPSRC---PWGQK-----------------------------AFSAYLGADEAAWRS-------YDASL----LVA 206 (275)
T ss_pred CCccCcccC---cchHH-----------------------------HHHHHhcccccchhh-------cchHH----HHh
Confidence 987653211 00000 000000000000000 00000 111
Q ss_pred cCCCCCcCEEEEeeCCCcccCc-hhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 243 NFSKVTVPFLTVHGTADGVTCP-TSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.. ....|+++++|+.|+.++. .....+.+.+. +..+++.+++|++|.+.+ .........+|..++
T Consensus 207 ~~-~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 207 DG-GRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred hc-ccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhh
Confidence 11 2467999999999999998 45555555553 244788999999998872 333555555665543
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=174.20 Aligned_cols=272 Identities=12% Similarity=0.115 Sum_probs=159.6
Q ss_pred cceeEEEcCCCcEEEEEecCCCC-----CcceEEEEecCCCCCccccHHH-----HHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQ-----KVKATVYMTHGYGSDTGWMFQK-----ICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~-----~~~~~vv~~HG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
.+...+...++.+..+.|.|... ..+++|||+||++.+.. .|+. +.+.|.++||+|+++|+ |.++.
T Consensus 37 ~tp~~vv~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~ 112 (994)
T PRK07868 37 PSPFQIVESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDK 112 (994)
T ss_pred CCCCcEEEEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCCh
Confidence 34445555556555666666531 35689999999987665 7765 37889999999999994 55554
Q ss_pred Ccc-cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC-CCceeEEEEccCcccCCCCCchhhH
Q 020633 100 IRC-YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE-PNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 100 ~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
... ...++.+++..+.+.++.+.... ..+++++||||||.+++.+++.++ ++ |+++|++++..++.........
T Consensus 113 ~~~~~~~~l~~~i~~l~~~l~~v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~-v~~lvl~~~~~d~~~~~~~~~~ 188 (994)
T PRK07868 113 VEGGMERNLADHVVALSEAIDTVKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKD-IASIVTFGSPVDTLAALPMGIP 188 (994)
T ss_pred hHcCccCCHHHHHHHHHHHHHHHHHhh---CCceEEEEEChhHHHHHHHHHhcCCCc-cceEEEEecccccCCCCcccch
Confidence 322 12466777666666666654332 347999999999999999887654 46 9999998877654322110000
Q ss_pred HH---HHhhhhh-----h-hhcccc-------cCCcc------cccccccC------ChHHHHHHhcCCC-CcCCCCchh
Q 020633 178 HL---FMYGLLF-----G-LADTWA-------AMPDN------KMVGKAIK------DPEKLKVIASNPR-RYTGKPRVG 228 (323)
Q Consensus 178 ~~---~~~~~~~-----~-~~~~~~-------~~~~~------~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~ 228 (323)
.. .....+. . ..+.+. ..+.. .+...... ............. ... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~----g~ 264 (994)
T PRK07868 189 AGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWS----GP 264 (994)
T ss_pred hhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccc----hH
Confidence 00 0000000 0 000000 00000 00000000 0000011110000 000 01
Q ss_pred HHHHHHHHHHH---HH----------hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccE-EEecCCCcccccC
Q 020633 229 TMREIARVCQY---IQ----------DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI-KIYDGMYHSLIQG 294 (323)
Q Consensus 229 ~~~~~~~~~~~---~~----------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~ 294 (323)
...++...... .. ..++++++|+|+|+|++|.++|++.++.+.+.+ ++.++ .+++++||+.++.
T Consensus 265 ~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~ 342 (994)
T PRK07868 265 AISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVV 342 (994)
T ss_pred HHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeee
Confidence 11222222210 10 137889999999999999999999999999888 67776 6779999998854
Q ss_pred CCchhHHHHHHHHHHHHHHHHh
Q 020633 295 EPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
-. ...++++..|.+||.++..
T Consensus 343 g~-~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 343 GS-RAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred ch-hhhhhhChHHHHHHHHhcc
Confidence 43 4567799999999998864
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-23 Score=158.84 Aligned_cols=205 Identities=20% Similarity=0.166 Sum_probs=123.1
Q ss_pred cEEEEecCCCCcCCCC---CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE
Q 020633 84 YAVFAADLLGHGRSDG---IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v 160 (323)
|+|+++|+||+|.|++ .....++.+++++++..+++.+..+ +++++||||||.+++.++..+|++ |+++|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~vG~S~Gg~~~~~~a~~~p~~-v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK------KINLVGHSMGGMLALEYAAQYPER-VKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS------SEEEEEETHHHHHHHHHHHHSGGG-EEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC------CeEEEEECCChHHHHHHHHHCchh-hcCcE
Confidence 7899999999999985 4444558899999999999988865 799999999999999999999998 99999
Q ss_pred EccCcc----cCCCCCchh-hHHHHHhhhhhh-hhcccccCCccc-----ccccc-cCChHHHHHHhcCCCCcCCCCch-
Q 020633 161 FSAPLF----VIPENMKPS-KLHLFMYGLLFG-LADTWAAMPDNK-----MVGKA-IKDPEKLKVIASNPRRYTGKPRV- 227 (323)
Q Consensus 161 l~~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 227 (323)
+++++. ......... ............ ............ ..... ........... ...........
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 152 (230)
T PF00561_consen 74 LISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQ-QYARFAETDAFD 152 (230)
T ss_dssp EESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH-HHHHTCHHHHHH
T ss_pred EEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchh-hhhHHHHHHHHh
Confidence 999852 110000000 000000000000 000000000000 00000 00000000000 00000000000
Q ss_pred hHH--HHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 228 GTM--REIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 228 ~~~--~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
... .............+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||..+++.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHH
T ss_pred hhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHh
Confidence 000 01111112244567789999999999999999999999988888 7899999999999999766665
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.4e-21 Score=130.78 Aligned_cols=195 Identities=16% Similarity=0.181 Sum_probs=144.1
Q ss_pred ceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---C--CccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 31 GKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---S--DTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~--~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
.++.+..+-|++....-.+. ....|..|++|.-+ + +.. .-..++..|.+.||.++.+|+||.|.|.+.-+.
T Consensus 5 ~~v~i~Gp~G~le~~~~~~~-~~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-- 80 (210)
T COG2945 5 PTVIINGPAGRLEGRYEPAK-TPAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-- 80 (210)
T ss_pred CcEEecCCcccceeccCCCC-CCCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcccC--
Confidence 45666667776655544333 36788999999643 2 222 556778889999999999999999999876543
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCe-EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPG-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.. --.+|..++++|++.+.+ ..+. .+.|+|+|+++++.+|.+.|+ ....+.+.|.....
T Consensus 81 Gi-GE~~Da~aaldW~~~~hp--~s~~~~l~GfSFGa~Ia~~la~r~~e--~~~~is~~p~~~~~--------------- 140 (210)
T COG2945 81 GI-GELEDAAAALDWLQARHP--DSASCWLAGFSFGAYIAMQLAMRRPE--ILVFISILPPINAY--------------- 140 (210)
T ss_pred Cc-chHHHHHHHHHHHHhhCC--CchhhhhcccchHHHHHHHHHHhccc--ccceeeccCCCCch---------------
Confidence 22 235889999999999876 4444 689999999999999999887 55666666544310
Q ss_pred hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
-...+....+|.++|+|+.|.+++.
T Consensus 141 -------------------------------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 -------------------------------------------------------DFSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred -------------------------------------------------------hhhhccCCCCCceeEecChhhhhcH
Confidence 0123344578999999999999998
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+...++.+.. ..+++++++++|+++ . ....+.+.+.+|+.
T Consensus 166 ~~~l~~~~~~---~~~~i~i~~a~HFF~-g----Kl~~l~~~i~~~l~ 205 (210)
T COG2945 166 VAVLKWQESI---KITVITIPGADHFFH-G----KLIELRDTIADFLE 205 (210)
T ss_pred HHHHHhhcCC---CCceEEecCCCceec-c----cHHHHHHHHHHHhh
Confidence 8877777653 578999999999999 2 24458888888884
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.6e-21 Score=149.86 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=145.0
Q ss_pred cCcccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 26 QGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
...+.+++.++..+++|..+.+.|...++.|+||++.|+.+.....+..+.+.|+++|+.++++|.||.|.|....-. .
T Consensus 161 ~~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~ 239 (411)
T PF06500_consen 161 SDYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-Q 239 (411)
T ss_dssp SSSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S
T ss_pred CCCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-c
Confidence 345567778888777888888888876788999999999877764666667789999999999999999998643321 1
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+. -..++++++.....+|..+|.++|.|+||++|.++|..++++ ++++|..+++...- ..............
T Consensus 240 D~~~---l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-lkavV~~Ga~vh~~--ft~~~~~~~~P~my 313 (411)
T PF06500_consen 240 DSSR---LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-LKAVVALGAPVHHF--FTDPEWQQRVPDMY 313 (411)
T ss_dssp -CCH---HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--SEEEEES---SCG--GH-HHHHTTS-HHH
T ss_pred CHHH---HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc-eeeEeeeCchHhhh--hccHHHHhcCCHHH
Confidence 2222 245677777777667788999999999999999999988888 99999999865321 00000000000000
Q ss_pred -hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcC--CCCCcCEEEEeeCCCccc
Q 020633 186 -FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNF--SKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~ 262 (323)
..+...... ....+............. ....+ .+..+|+|.+.+++|+++
T Consensus 314 ~d~LA~rlG~--------~~~~~~~l~~el~~~SLk-------------------~qGlL~~rr~~~plL~i~~~~D~v~ 366 (411)
T PF06500_consen 314 LDVLASRLGM--------AAVSDESLRGELNKFSLK-------------------TQGLLSGRRCPTPLLAINGEDDPVS 366 (411)
T ss_dssp HHHHHHHCT---------SCE-HHHHHHHGGGGSTT-------------------TTTTTTSS-BSS-EEEEEETT-SSS
T ss_pred HHHHHHHhCC--------ccCCHHHHHHHHHhcCcc-------------------hhccccCCCCCcceEEeecCCCCCC
Confidence 000000000 000000000000000000 01233 567899999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCC-cccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMY-HSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+..+.++..- .+.+...++... |..+ ++.+..+.+||++.+
T Consensus 367 P~eD~~lia~~s--~~gk~~~~~~~~~~~gy--------~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 367 PIEDSRLIAESS--TDGKALRIPSKPLHMGY--------PQALDEIYKWLEDKL 410 (411)
T ss_dssp -HHHHHHHHHTB--TT-EEEEE-SSSHHHHH--------HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcC--CCCceeecCCCccccch--------HHHHHHHHHHHHHhc
Confidence 999988777665 556777777544 5444 347889999998875
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-20 Score=144.94 Aligned_cols=208 Identities=13% Similarity=0.148 Sum_probs=139.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.+.+.++.|..++..|+|||+||++.+.. .|..+++.|+++||.|+++|++|++.+.. ...+ ++..+++++
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i----~d~~~~~~~ 108 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEI----KDAAAVINW 108 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhH----HHHHHHHHH
Confidence 67788888876577899999999998877 79999999999999999999998643311 1122 223333333
Q ss_pred HHhc--------CCCCCCCeEEEEechhHHHHHHHhhhcCCC----ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 121 VRDS--------EPYRDLPGFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 121 l~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
+... ...+..+++++|||+||.+++.+|..+++. +++++|+++|..........
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~-------------- 174 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT-------------- 174 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC--------------
Confidence 3321 112346899999999999999999987742 28999999887543210000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc-----c--
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG-----V-- 261 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~-- 261 (323)
..... . ......++.+|+|+|.+..|. .
T Consensus 175 --------~p~il------------------~-------------------~~~~s~~~~~P~liig~g~~~~~~~~~~p 209 (313)
T PLN00021 175 --------PPPVL------------------T-------------------YAPHSFNLDIPVLVIGTGLGGEPRNPLFP 209 (313)
T ss_pred --------CCccc------------------c-------------------cCcccccCCCCeEEEecCCCccccccccc
Confidence 00000 0 111223468999999999763 2
Q ss_pred --cCchh-HHHHHHHcCCCCccEEEecCCCcccccCCC-------------------chhHHHHHHHHHHHHHHHHhh
Q 020633 262 --TCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEP-------------------DENANLVLKDMREWIDERVER 317 (323)
Q Consensus 262 --~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-------------------~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.|... ..++++.++ +.+.+.+++++||+-++++. +...+.+...+..||+..+..
T Consensus 210 ~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 210 PCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred ccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 23433 366777765 46788889999999997665 123455666788899887753
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=148.30 Aligned_cols=247 Identities=19% Similarity=0.207 Sum_probs=151.1
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCC-CCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcC-CCCC--
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGR-SDGI-- 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~-- 100 (323)
..+....+.+...+| +|+.+.+.|. ..++.|.||.+||.++... .+.... .++..||.|+.+|.||+|. +...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~ 129 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRG 129 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SS
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-Cccccc-ccccCCeEEEEecCCCCCCCCCCccc
Confidence 455666788888899 9999999998 4467899999999998765 454433 3678899999999999983 3210
Q ss_pred ------c----------ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 101 ------R----------CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 101 ------~----------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
. ...+-+..+..|....++.+.....+|..+|.+.|.|+||.+++.+|+..+. |++++...|
T Consensus 130 ~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r--v~~~~~~vP 207 (320)
T PF05448_consen 130 SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR--VKAAAADVP 207 (320)
T ss_dssp BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST---SEEEEESE
T ss_pred cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc--ccEEEecCC
Confidence 0 0001134456888899999998877888899999999999999999998765 999999888
Q ss_pred cccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh-cCCCCcCCCCchhHHHHHHHHHHHHHhc
Q 020633 165 LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
+..-... ...... ...........+. .+... .......+.+...+ ....
T Consensus 208 ~l~d~~~---------~~~~~~----------------~~~~y~~~~~~~~~~d~~~----~~~~~v~~~L~Y~D-~~nf 257 (320)
T PF05448_consen 208 FLCDFRR---------ALELRA----------------DEGPYPEIRRYFRWRDPHH----EREPEVFETLSYFD-AVNF 257 (320)
T ss_dssp SSSSHHH---------HHHHT------------------STTTHHHHHHHHHHSCTH----CHHHHHHHHHHTT--HHHH
T ss_pred Cccchhh---------hhhcCC----------------ccccHHHHHHHHhccCCCc----ccHHHHHHHHhhhh-HHHH
Confidence 6542100 000000 0000001111111 00000 00001111111111 3456
Q ss_pred CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++|++|+++..|-.|.++|+......++.+.+ .+++.+++..||... .+ ...+...+||.++
T Consensus 258 A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~----~~---~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 258 ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYG----PE---FQEDKQLNFLKEH 320 (320)
T ss_dssp GGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTT----HH---HHHHHHHHHHHH-
T ss_pred HHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCch----hh---HHHHHHHHHHhcC
Confidence 788999999999999999999999999999864 489999999999877 33 1267788888764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-19 Score=139.24 Aligned_cols=205 Identities=18% Similarity=0.198 Sum_probs=124.3
Q ss_pred cEEEEEecCCC--CCcceEEEEecCCCCCccccHH---HHHHHHhhCCcEEEEecCCCCcCC-----C------CCc---
Q 020633 41 KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ---KICISFATWGYAVFAADLLGHGRS-----D------GIR--- 101 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s-----~------~~~--- 101 (323)
.+.|.+|.|.. +.+.|+|+++||++++.. .|. .+.+.+...|+.|+.+|..++|.. . +..
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~ 109 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYL 109 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceee
Confidence 89999998863 246799999999987754 342 244566677999999998876621 0 000
Q ss_pred ----cc--CCC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 102 ----CY--LGD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ----~~--~~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
.. ... .....+++..+++..... .+..+++|+||||||..|+.++.++|+. +++++++++........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~-~~~~~~~~~~~~~~~~~-- 184 (283)
T PLN02442 110 NATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDK-YKSVSAFAPIANPINCP-- 184 (283)
T ss_pred ccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchh-EEEEEEECCccCcccCc--
Confidence 00 001 112334444444443221 1256899999999999999999999998 99999999876532110
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
+....+ ... +.. ... .....++ ......+...++|++++
T Consensus 185 -~~~~~~----~~~------------~g~---~~~--~~~~~d~-------------------~~~~~~~~~~~~pvli~ 223 (283)
T PLN02442 185 -WGQKAF----TNY------------LGS---DKA--DWEEYDA-------------------TELVSKFNDVSATILID 223 (283)
T ss_pred -hhhHHH----HHH------------cCC---Chh--hHHHcCh-------------------hhhhhhccccCCCEEEE
Confidence 100000 000 000 000 0000000 00123344568999999
Q ss_pred eeCCCcccCch-hHHHHHHHcC--CCCccEEEecCCCcccc
Q 020633 255 HGTADGVTCPT-SSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 255 ~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
+|++|.+++.. ..+.+.+.+. +.+++++++++.+|...
T Consensus 224 ~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 224 QGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred ECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 99999998863 3445544442 24578999999999876
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.5e-20 Score=137.30 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=87.4
Q ss_pred EEecCCC-CCcceEEEEecCCCCCccccHH---HHHHHHhhCCcEEEEecCCCCcCCCCCcccC-----CChHHHhhcHH
Q 020633 45 QSFLPLD-QKVKATVYMTHGYGSDTGWMFQ---KICISFATWGYAVFAADLLGHGRSDGIRCYL-----GDMEKVAASSL 115 (323)
Q Consensus 45 ~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~ 115 (323)
++|.|.+ .++.|+||++||.+++.. .+. .+...+.+.||.|+++|++|++.+....... ........++.
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLH 80 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHH
Confidence 4566654 256899999999997755 333 2445555679999999999987543211000 01123356778
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+++++..+..++..+++|+|||+||.+++.++.++|+. +.+++.+++..
T Consensus 81 ~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~~~~~g~~ 130 (212)
T TIGR01840 81 QLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDV-FAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchh-heEEEeecCCc
Confidence 888888887777778999999999999999999999998 89988877653
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=135.84 Aligned_cols=185 Identities=19% Similarity=0.218 Sum_probs=113.1
Q ss_pred CcceEEEEecCCCCCccccHHHHHH-HHhhCCcEEEEecCCC------CcC---CCC-----Ccc---cCCChHHHhhcH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICI-SFATWGYAVFAADLLG------HGR---SDG-----IRC---YLGDMEKVAASS 114 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~-----~~~---~~~~~~~~~~d~ 114 (323)
...++||++||+|.+.. .+..+.. .+......+++++-|. .|. +-- ... ....+...++.+
T Consensus 12 ~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp T-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 67899999999998875 5555544 2233357777776542 122 110 000 011234445566
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccccc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
.++|+..... .++..++++.|+|.||.+|+.++.++|.. +.++|++++..........
T Consensus 91 ~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~-~~gvv~lsG~~~~~~~~~~-------------------- 148 (216)
T PF02230_consen 91 DELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEP-LAGVVALSGYLPPESELED-------------------- 148 (216)
T ss_dssp HHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSST-SSEEEEES---TTGCCCHC--------------------
T ss_pred HHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcC-cCEEEEeeccccccccccc--------------------
Confidence 6677665433 35577999999999999999999999998 9999999976532211000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHc
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 274 (323)
...... ++|++++||++|+++|.+.++...+.+
T Consensus 149 ---------------------------------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L 181 (216)
T PF02230_consen 149 ---------------------------------------------RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFL 181 (216)
T ss_dssp ---------------------------------------------CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccC--CCcEEEEecCCCCcccHHHHHHHHHHH
Confidence 001111 789999999999999999888888777
Q ss_pred CC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 275 SS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 275 ~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.. .+++++.+++.||... .+ ..+.+.+||++++
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~----~~----~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEIS----PE----ELRDLREFLEKHI 216 (216)
T ss_dssp HCTT-GEEEEEETT-SSS------HH----HHHHHHHHHHHH-
T ss_pred HhcCCCEEEEEcCCCCCCCC----HH----HHHHHHHHHhhhC
Confidence 42 3578999999999887 34 6788999998763
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-18 Score=138.06 Aligned_cols=243 Identities=16% Similarity=0.232 Sum_probs=146.9
Q ss_pred ccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCC---CccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccC
Q 020633 29 RNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS---DTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
..++..+...+|.+..+.|.|.. ...|+||++||++. +.. .+..++..|++ .|+.|+++|+|.....
T Consensus 56 ~~~~~~i~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~------- 126 (318)
T PRK10162 56 ATRAYMVPTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEA------- 126 (318)
T ss_pred eEEEEEEecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCC-------
Confidence 34556677666788888898865 45789999999873 334 56778888877 4999999999964332
Q ss_pred CChHHHhhcHHHHHHHHHh---cCCCCCCCeEEEEechhHHHHHHHhhhc------CCCceeEEEEccCcccCCCCCchh
Q 020633 105 GDMEKVAASSLSFFKHVRD---SEPYRDLPGFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.+....+|+.++++++.. +.+++..+++|+|+|+||.+++.++... +.. +++++++.|..+.... ..
T Consensus 127 -~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~-~~~~vl~~p~~~~~~~--~s 202 (318)
T PRK10162 127 -RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGK-VAGVLLWYGLYGLRDS--VS 202 (318)
T ss_pred -CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccC-hhheEEECCccCCCCC--hh
Confidence 222334566666665543 2334467999999999999999988753 244 8999999987664211 00
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccccCChHHH---HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.... ...+. ........ ..+..+..... .+.... ....+.+.-.|++
T Consensus 203 --~~~~-------~~~~~----------~l~~~~~~~~~~~y~~~~~~~~-~p~~~p----------~~~~l~~~lPp~~ 252 (318)
T PRK10162 203 --RRLL-------GGVWD----------GLTQQDLQMYEEAYLSNDADRE-SPYYCL----------FNNDLTRDVPPCF 252 (318)
T ss_pred --HHHh-------CCCcc----------ccCHHHHHHHHHHhCCCccccC-CcccCc----------chhhhhcCCCCeE
Confidence 0000 00000 00000000 00100000000 000000 0011211235999
Q ss_pred EEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++|+.|++.+ ..+.+.+++. +..+++++++|..|.+....+ -...++..+.+.+||++.++
T Consensus 253 i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 253 IAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999999864 5566666663 345789999999998764322 24466788889999988764
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-19 Score=139.14 Aligned_cols=248 Identities=19% Similarity=0.219 Sum_probs=137.6
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
.+.+...+.. .++|+++||++++.. .|......+... .|+++++|+||||.|. .. .......++++..++
T Consensus 11 ~~~~~~~~~~----~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~ 82 (282)
T COG0596 11 RLAYREAGGG----GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALL 82 (282)
T ss_pred EEEEeecCCC----CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHH
Confidence 4555555543 459999999998776 565532333332 1899999999999997 11 224455588888888
Q ss_pred HHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh------h---HHHHHhhhh--hh
Q 020633 119 KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS------K---LHLFMYGLL--FG 187 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~------~---~~~~~~~~~--~~ 187 (323)
+.+... +++++|||+||.+++.++.++|+. ++++|++++........... . ......... ..
T Consensus 83 ~~~~~~------~~~l~G~S~Gg~~~~~~~~~~p~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (282)
T COG0596 83 DALGLE------KVVLVGHSMGGAVALALALRHPDR-VRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAA 155 (282)
T ss_pred HHhCCC------ceEEEEecccHHHHHHHHHhcchh-hheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhh
Confidence 877644 699999999999999999999998 99999999765411000000 0 000000000 00
Q ss_pred hhcccccCC-ccccc-------ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCC
Q 020633 188 LADTWAAMP-DNKMV-------GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 188 ~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
......... ..... ......... ......................... ........+++|+++++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~d 232 (282)
T COG0596 156 FAALLAALGLLAALAAAARAGLAEALRAPLL-GAAAAAFARAARADLAAALLALLDR--DLRAALARITVPTLIIHGEDD 232 (282)
T ss_pred hhhhhhcccccccccccchhccccccccccc-hhHhhhhhhhcccccchhhhccccc--ccchhhccCCCCeEEEecCCC
Confidence 000000000 00000 000000000 0000000000000000000000000 122345667899999999999
Q ss_pred cccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
.+.|......+.+.+.. ..++++++++||..++++|+. +.+.+.+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~----~~~~i~~~~ 279 (282)
T COG0596 233 PVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEA----FAAALLAFL 279 (282)
T ss_pred CcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHH----HHHHHHHHH
Confidence 66666555666666622 489999999999999877764 666666643
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.8e-18 Score=124.25 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=96.7
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
++..+||-+||.+|++. .|..+...|.+.|.++|.+++||+|.+++.....++-.+...-+.++++.+..+ .++
T Consensus 33 s~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-----~~~ 106 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-----GKL 106 (297)
T ss_pred CCceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-----Cce
Confidence 56779999999999988 899999999999999999999999999988887788888889999999999885 389
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
+++|||.||-.|+.++..+| ..++++++|.....
T Consensus 107 i~~gHSrGcenal~la~~~~---~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 107 IFLGHSRGCENALQLAVTHP---LHGLVLINPPGLRP 140 (297)
T ss_pred EEEEeccchHHHHHHHhcCc---cceEEEecCCcccc
Confidence 99999999999999999985 66999999876433
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=129.77 Aligned_cols=264 Identities=10% Similarity=0.082 Sum_probs=148.6
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHH-----HHHHhhCCcEEEEecCCCCcCCCC--Ccc-c
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKI-----CISFATWGYAVFAADLLGHGRSDG--IRC-Y 103 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~--~~~-~ 103 (323)
++.+.+..|.|++..+|..+ +.+|++|-.|..|.+....|..+ ...+.++ |.++-+|.||+..... +.. .
T Consensus 1 eh~v~t~~G~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~ 78 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQ 78 (283)
T ss_dssp -EEEEETTEEEEEEEESS---TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT--
T ss_pred CceeccCceEEEEEEEecCC-CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccc
Confidence 35678888999999999876 57999999999998865345544 3455555 9999999999965432 222 2
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+++++++++..++++++.+ .++.+|-..|++|..++|..+|++ |.++||+++....... ..|....+..
T Consensus 79 yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~-V~GLiLvn~~~~~~gw--~Ew~~~K~~~ 149 (283)
T PF03096_consen 79 YPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPER-VLGLILVNPTCTAAGW--MEWFYQKLSS 149 (283)
T ss_dssp ---HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGG-EEEEEEES---S---H--HHHHHHHHH-
T ss_pred ccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccc-eeEEEEEecCCCCccH--HHHHHHHHhc
Confidence 458999999999999999987 699999999999999999999999 9999999987653321 1121111111
Q ss_pred hhhhhhcccccCCccccccccc------CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 184 LLFGLADTWAAMPDNKMVGKAI------KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
...... .+.......++...+ ......+.++...........+..+.+.+....++....+...||+|++.|+
T Consensus 150 ~~L~~~-gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~ 228 (283)
T PF03096_consen 150 WLLYSY-GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGD 228 (283)
T ss_dssp -------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEET
T ss_pred cccccc-ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEec
Confidence 000000 000000000000001 0111111111111111111112222222233344556667778999999999
Q ss_pred CCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
..+.. +.+.++..++.....++..+++||=.+..| .+.++.+.+.=||..
T Consensus 229 ~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eE----qP~klaea~~lFlQG 278 (283)
T PF03096_consen 229 NSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEE----QPGKLAEAFKLFLQG 278 (283)
T ss_dssp TSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-----HHHHHHHHHHHHHH
T ss_pred CCcch--hhHHHHHhhcCcccceEEEecccCCccccc----CcHHHHHHHHHHHcc
Confidence 98764 567788888876678899999999999944 445588888888864
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-19 Score=151.06 Aligned_cols=130 Identities=20% Similarity=0.257 Sum_probs=104.6
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc--c-cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--W-MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
++.|| +|++..+.|.+.++.|+||++||++.+.. + ........|+++||.|+++|+||+|.|.+..... + ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccc
Confidence 56789 99999999876567899999999986542 1 1123456788899999999999999998765432 2 5678
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
+|+.++++++..+.. ...+++++|+|+||.+++.+|..+|+. ++++|..++..+..
T Consensus 80 ~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~-l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPA-LRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCc-eeEEeecCcccchh
Confidence 999999999987632 246999999999999999999998888 99999988776543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.3e-18 Score=145.77 Aligned_cols=252 Identities=12% Similarity=0.069 Sum_probs=161.2
Q ss_pred cCcccceeEEEcCCC-cEEE-EEecCCC--CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFT-QSFLPLD--QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~-~~~~~~~--~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
.....+++.+++.|| +|.+ .++.+.. .++.|+||++||..+.+ ...|......|+++||.|+.++.||-|.-...
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 345778888999999 9998 4554531 25679999999987654 23566666788899999999999987654321
Q ss_pred c---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 101 R---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 101 ~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
. .....-....+|+.+.+++|..+.-.++.++.+.|.|.||+++..++.++|++ ++++|+..|+.++...+...
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl-f~A~v~~vp~~D~~~~~~~~-- 568 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL-FHGVIAQVPFVDVVTTMLDE-- 568 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh-eeEEEecCCchhHhhhcccC--
Confidence 1 00001113457888888888877667788999999999999999999999999 99999999987743221000
Q ss_pred HHHHhhhhhhhhcccccCCcc-cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-EEEEe
Q 020633 178 HLFMYGLLFGLADTWAAMPDN-KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVH 255 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~ 255 (323)
........ ...+.. .++.....+. ... ....+.+++.| +|+++
T Consensus 569 -------------~~p~~~~~~~e~G~p-~~~~~~~~l~--------------------~~S-P~~~v~~~~~P~lLi~~ 613 (686)
T PRK10115 569 -------------SIPLTTGEFEEWGNP-QDPQYYEYMK--------------------SYS-PYDNVTAQAYPHLLVTT 613 (686)
T ss_pred -------------CCCCChhHHHHhCCC-CCHHHHHHHH--------------------HcC-chhccCccCCCceeEEe
Confidence 00000000 000000 0111111111 000 23445667889 56779
Q ss_pred eCCCcccCchhHHHHHHHcC--CCCccEEEe---cCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 256 GTADGVTCPTSSKLLYEKAS--SADKSIKIY---DGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|.+|.-||+.++.++..++. +...+.+++ +++||... ..... .-+-......||-..+..
T Consensus 614 g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~-~~r~~-~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 614 GLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK-SGRFK-SYEGVAMEYAFLIALAQG 678 (686)
T ss_pred cCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC-cCHHH-HHHHHHHHHHHHHHHhCC
Confidence 99999999999999988874 234567777 89999954 21122 222233446677666543
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-18 Score=124.74 Aligned_cols=267 Identities=10% Similarity=0.032 Sum_probs=169.2
Q ss_pred cceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHH-----HHHHhhCCcEEEEecCCCCcCCC--CCcc
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKI-----CISFATWGYAVFAADLLGHGRSD--GIRC 102 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~--~~~~ 102 (323)
.+++.+.+..|.+++.++|..+ +++|++|-.|..|.++...|+.+ +..+..+ |.++.+|.||+-... -+.+
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~-~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPK-GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred ceeeeeccccccEEEEEecCCC-CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 5788899999999999999987 47889999999998876446544 4456677 999999999995443 2222
Q ss_pred -cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 103 -YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 103 -~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
...+++++++++..+++++..+ .++-+|-..|++|..++|..||++ |-++||+++....... ..|...++
T Consensus 100 y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~r-V~GLvLIn~~~~a~gw--iew~~~K~ 170 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPER-VLGLVLINCDPCAKGW--IEWAYNKV 170 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhh-eeEEEEEecCCCCchH--HHHHHHHH
Confidence 2458999999999999999976 689999999999999999999999 9999999986653322 22222222
Q ss_pred hhhhhhhh---cccccCCccccccccc--CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC----CCCcCEE
Q 020633 182 YGLLFGLA---DTWAAMPDNKMVGKAI--KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS----KVTVPFL 252 (323)
Q Consensus 182 ~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~P~l 252 (323)
...+.... ...........++... .+....+.++...........+..+.+.+....++..... .++||+|
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vl 250 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVL 250 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEE
Confidence 21111000 0000000000011100 0111112221111111111111111111111111222222 4569999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.|++.+.+ +.+.....++...+.++..+.++|-.+..++|.+ +.+.+.=|+..
T Consensus 251 lvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k----l~ea~~~FlqG 305 (326)
T KOG2931|consen 251 LVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK----LAEAFKYFLQG 305 (326)
T ss_pred EEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchH----HHHHHHHHHcc
Confidence 9999998775 4566677777656788999999999999667766 88888888764
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=122.16 Aligned_cols=244 Identities=18% Similarity=0.169 Sum_probs=164.2
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCC----
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG---- 99 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---- 99 (323)
..++.-+.+++..+| +|..+...|... ++.|.||-.||.++... .|..+. .++..||.|+.+|.||.|.|..
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDML-HWAVAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-Cccccc-cccccceeEEEEecccCCCccccCCC
Confidence 345556678888899 999999999875 67899999999998766 565544 3456799999999999998842
Q ss_pred Cccc----------------CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 100 IRCY----------------LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 100 ~~~~----------------~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
.+.. .+-+.....|+..+++.+..-..++.++|.+.|.|.||.+++.+++..|. +++++++-
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r--ik~~~~~~ 207 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR--IKAVVADY 207 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh--hhcccccc
Confidence 1110 11134455788888888888778889999999999999999998888776 99999998
Q ss_pred CcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhc
Q 020633 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN 243 (323)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (323)
|+.+....... ... .-...+....+...... -....+-+...+ ....
T Consensus 208 Pfl~df~r~i~-------------------~~~-------~~~ydei~~y~k~h~~~------e~~v~~TL~yfD-~~n~ 254 (321)
T COG3458 208 PFLSDFPRAIE-------------------LAT-------EGPYDEIQTYFKRHDPK------EAEVFETLSYFD-IVNL 254 (321)
T ss_pred cccccchhhee-------------------ecc-------cCcHHHHHHHHHhcCch------HHHHHHHHhhhh-hhhH
Confidence 87653211100 000 00001111111111110 011111111111 3455
Q ss_pred CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..++++|+|+..|-.|+++|+...-.+++++.. .+++.+++.-+|... |.- ..+.+..|+...
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~---p~~----~~~~~~~~l~~l 317 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG---PGF----QSRQQVHFLKIL 317 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC---cch----hHHHHHHHHHhh
Confidence 678899999999999999999999999999853 467778877678777 332 334566777654
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=118.93 Aligned_cols=259 Identities=17% Similarity=0.197 Sum_probs=153.0
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc--ccCCChHH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR--CYLGDMEK 109 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~ 109 (323)
..+...|| .+....|...+ +....++.-.+.+.... +|+.++..++++||.|+.+|+||.|.|.... .....+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-KASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCC-CCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 56788899 99999887764 33334444444444344 8999999999999999999999999998543 22345666
Q ss_pred Hh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH--HHhhhhh
Q 020633 110 VA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--FMYGLLF 186 (323)
Q Consensus 110 ~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~--~~~~~~~ 186 (323)
++ .|+.+.+++++...+ ..+.+.+|||+||.+.-. +.+++. ..+....+........+....... .+.....
T Consensus 86 wA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL-~~~~~k--~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~ 160 (281)
T COG4757 86 WARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGL-LGQHPK--YAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVG 160 (281)
T ss_pred hhhcchHHHHHHHHhhCC--CCceEEeeccccceeecc-cccCcc--cceeeEeccccccccchhhhhcccceeeccccc
Confidence 65 799999999998544 668999999999997544 444452 444444444333332221111000 0000000
Q ss_pred hhhcccccCCcccccccc--cCChHHHH--HHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 187 GLADTWAAMPDNKMVGKA--IKDPEKLK--VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.....+.....+.+++.. ..-...++ ..-..+..+...+... ...+..+.+++|++.+...+|+.+
T Consensus 161 p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~----------~~~q~yaaVrtPi~~~~~~DD~w~ 230 (281)
T COG4757 161 PPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMR----------NYRQVYAAVRTPITFSRALDDPWA 230 (281)
T ss_pred cchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHh----------HHHHHHHHhcCceeeeccCCCCcC
Confidence 000111111111111111 01111111 1111221111111111 134455678999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecC----CCcccccCCCchhHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDG----MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|+...+.+.+...+...+...++. .||+..+.++ .|.+++.+++|+
T Consensus 231 P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~---~Ealwk~~L~w~ 280 (281)
T COG4757 231 PPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREP---FEALWKEMLGWF 280 (281)
T ss_pred CHHHHHHHHHhhhcCcccceecCcccCcccchhhhccc---hHHHHHHHHHhh
Confidence 999999888887555566666654 4899886554 245778888776
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=119.53 Aligned_cols=226 Identities=17% Similarity=0.197 Sum_probs=137.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH-HHhcCCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH-VRDSEPYRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~-l~~~~~~~~~~ 131 (323)
..+..++++|-.|+++. .|+.+...|... ..++++.+||+|..-+.+.. .+++.+++.+...+.. .. ..+
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~~------d~P 75 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPLL------DAP 75 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhccccC------CCC
Confidence 45778899998888888 899999988765 99999999999987544433 3788888777777663 22 458
Q ss_pred eEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCcccCCCCCc--hhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 132 GFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+.++||||||++|..+|.+.... .+.++.+.+.......... ....-..+...+..+.. .......+
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG---------~p~e~led 146 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGG---------TPPELLED 146 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCC---------CChHHhcC
Confidence 99999999999999999874221 1455555443222111000 00001111111111100 00011112
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH-hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ-DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
++...++. ..++..+...+.+. ..-..++||+.++.|++|..+..+....+.+..+ ...++.+++|
T Consensus 147 ~El~~l~L------------PilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdG 213 (244)
T COG3208 147 PELMALFL------------PILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDG 213 (244)
T ss_pred HHHHHHHH------------HHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecC
Confidence 21111110 01111111111111 1224689999999999999999999888888764 4689999996
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 287 MYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
||++. ....+++...|.+.+...
T Consensus 214 -gHFfl----~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 214 -GHFFL----NQQREEVLARLEQHLAHH 236 (244)
T ss_pred -cceeh----hhhHHHHHHHHHHHhhhh
Confidence 89999 444555777777766543
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=127.13 Aligned_cols=258 Identities=12% Similarity=0.128 Sum_probs=154.1
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc--c--------cHHHHHH---HHhhCCcEEEEecCCCCc-CCCCC----cc
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--W--------MFQKICI---SFATWGYAVFAADLLGHG-RSDGI----RC 102 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~--------~~~~~~~---~l~~~g~~v~~~d~~G~G-~s~~~----~~ 102 (323)
+|.|..||..+.....+||++|++.+++. . .|+.++. .+....|.||+.|..|.+ .|+++ +.
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~ 116 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG 116 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC
Confidence 89999999887666789999999988542 0 2333321 233334999999999986 33322 11
Q ss_pred --------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc
Q 020633 103 --------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 103 --------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~ 173 (323)
...++.+++.--..++++|+.+ ++. |+|-||||+.|+.++..+|++ |+.+|.+++........
T Consensus 117 g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~------~l~avvGgSmGGMqaleWa~~yPd~-V~~~i~ia~~~r~s~~~- 188 (368)
T COG2021 117 GKPYGSDFPVITIRDMVRAQRLLLDALGIK------KLAAVVGGSMGGMQALEWAIRYPDR-VRRAIPIATAARLSAQN- 188 (368)
T ss_pred CCccccCCCcccHHHHHHHHHHHHHhcCcc------eEeeeeccChHHHHHHHHHHhChHH-HhhhheecccccCCHHH-
Confidence 2236677777777788888876 555 999999999999999999999 99999888755433211
Q ss_pred hhhHHHHHhhhhhhhhccc--------------------------------ccCCcccccccccC----ChHHHHHHhcC
Q 020633 174 PSKLHLFMYGLLFGLADTW--------------------------------AAMPDNKMVGKAIK----DPEKLKVIASN 217 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~----~~~~~~~~~~~ 217 (323)
..+.......-..-+.| .....+........ .......+...
T Consensus 189 --ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~q 266 (368)
T COG2021 189 --IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQ 266 (368)
T ss_pred --HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHH
Confidence 11111111110001111 00000000000000 01111222222
Q ss_pred CCCcCCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe-cCC
Q 020633 218 PRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY-DGM 287 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 287 (323)
-.++..+.....+..+.+..+ ++...++++++|+|++.-+.|..+|++..+.+.+.+..... ++++ ...
T Consensus 267 g~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~ 345 (368)
T COG2021 267 GDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPY 345 (368)
T ss_pred HHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCC
Confidence 222222222222333333222 23345788999999999999999999999999999943332 6555 467
Q ss_pred CcccccCCCchhHHHHHHHHHHHHHH
Q 020633 288 YHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 288 gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
||..++.+.+. +...|..||+.
T Consensus 346 GHDaFL~e~~~----~~~~i~~fL~~ 367 (368)
T COG2021 346 GHDAFLVESEA----VGPLIRKFLAL 367 (368)
T ss_pred Cchhhhcchhh----hhHHHHHHhhc
Confidence 99998654443 66788888763
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=120.78 Aligned_cols=180 Identities=16% Similarity=0.157 Sum_probs=125.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC--cCCC---CCcccCC---ChHHHhhcHHHHHHHHHhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH--GRSD---GIRCYLG---DMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~---~~~~~~~---~~~~~~~d~~~~l~~l~~~ 124 (323)
...|+||++||+|++.. .+-.+.+.+..+ +.++.+.-+-- |.-. ......+ ++..-.+.+.++++.+..+
T Consensus 16 p~~~~iilLHG~Ggde~-~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDEL-DLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChh-hhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 55678999999998765 565666666555 66666532210 1000 0001111 2333345566677777777
Q ss_pred CCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
++++..+++++|+|.||++++.+..++|.. ++++|+.++........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~-~~~ail~~g~~~~~~~~-------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGL-FAGAILFSGMLPLEPEL-------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchh-hccchhcCCcCCCCCcc--------------------------------
Confidence 777788999999999999999999999998 99999999876533110
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEE
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIK 282 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 282 (323)
.-..-..|+++++|+.|+++|...+.++.+.+. +.+++..
T Consensus 141 --------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~ 182 (207)
T COG0400 141 --------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVR 182 (207)
T ss_pred --------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEE
Confidence 001126799999999999999988888777763 3567788
Q ss_pred EecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 283 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++ .||... .+ ..+.+.+|+.+.
T Consensus 183 ~~~-~GH~i~----~e----~~~~~~~wl~~~ 205 (207)
T COG0400 183 WHE-GGHEIP----PE----ELEAARSWLANT 205 (207)
T ss_pred Eec-CCCcCC----HH----HHHHHHHHHHhc
Confidence 888 799988 44 566777788765
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-17 Score=117.45 Aligned_cols=230 Identities=14% Similarity=0.139 Sum_probs=128.7
Q ss_pred eeEEEcCCC-cEEEEEecCCCC--CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccCCCh
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~ 107 (323)
++.+...+| +|+.+.-.|.+. ..+++||+..|++.... .|..++.+|+..||+|+.+|.-.| |.|++.... .++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cch
Confidence 566778899 999999988764 34589999999998777 899999999999999999999988 999887554 388
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh-hhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG-LLF 186 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~~ 186 (323)
.....++..+++++.... ..++.|+.-|+.|-+|+..|.+- + +.-+|..-+...+...... .+.. .+.
T Consensus 82 s~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~i-~--lsfLitaVGVVnlr~TLe~-----al~~Dyl~ 150 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAADI-N--LSFLITAVGVVNLRDTLEK-----ALGYDYLQ 150 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTTS-----SEEEEES--S-HHHHHHH-----HHSS-GGG
T ss_pred HHhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhcc-C--cceEEEEeeeeeHHHHHHH-----Hhccchhh
Confidence 889999999999999543 56799999999999999999853 3 7777776665543211100 0000 000
Q ss_pred hhhcccccCCccccccccc-CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 187 GLADTWAAMPDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
......+. ...+.+... .+.+..+.++...... +.....++.+++|++.+++.+|.+|...
T Consensus 151 ~~i~~lp~--dldfeGh~l~~~vFv~dc~e~~w~~l----------------~ST~~~~k~l~iP~iaF~A~~D~WV~q~ 212 (294)
T PF02273_consen 151 LPIEQLPE--DLDFEGHNLGAEVFVTDCFEHGWDDL----------------DSTINDMKRLSIPFIAFTANDDDWVKQS 212 (294)
T ss_dssp S-GGG--S--EEEETTEEEEHHHHHHHHHHTT-SSH----------------HHHHHHHTT--S-EEEEEETT-TTS-HH
T ss_pred cchhhCCC--cccccccccchHHHHHHHHHcCCccc----------------hhHHHHHhhCCCCEEEEEeCCCccccHH
Confidence 00000000 000111111 1122333333332211 1134567788999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
.+.++...+.+..++++.++|++|.+.
T Consensus 213 eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 213 EVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999888778889999999999988
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.5e-17 Score=132.23 Aligned_cols=259 Identities=12% Similarity=0.068 Sum_probs=156.7
Q ss_pred ccCcccceeEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCccccH-----HHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 25 SQGVRNGKKYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMF-----QKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
...+..+...+...++.+..+.|.|... .-+.+||+++.+- +..+.+ +.++++|.++||.|+.+|+++-+...
T Consensus 184 G~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~ 262 (560)
T TIGR01839 184 GKNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQI-NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH 262 (560)
T ss_pred CCCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhh-hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh
Confidence 4455556666666666556666766532 4568999999986 333244 57899999999999999999876553
Q ss_pred CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHH----HhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 99 GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATML----MYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
. ..+++++++.+.+.++.+....+ ..++.++|+|+||.+++. +++++++.+|++++++.+..++......
T Consensus 263 r----~~~ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l 336 (560)
T TIGR01839 263 R----EWGLSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPA 336 (560)
T ss_pred c----CCCHHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcc
Confidence 2 24889999999999999987765 668999999999999986 7778886239999999888776542211
Q ss_pred hh-----HHHHHhhhh--hhhhcc------cccCCccccccc-----c-c-CChHH--HHHHhcCCCCcCCCCchhHHHH
Q 020633 175 SK-----LHLFMYGLL--FGLADT------WAAMPDNKMVGK-----A-I-KDPEK--LKVIASNPRRYTGKPRVGTMRE 232 (323)
Q Consensus 175 ~~-----~~~~~~~~~--~~~~~~------~~~~~~~~~~~~-----~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
.. ......... ....+. +.......++.. . . ..+.. ...+..+...+.. ....+
T Consensus 337 ~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg----~~~~e 412 (560)
T TIGR01839 337 ALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPA----AFHGD 412 (560)
T ss_pred hhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchH----HHHHH
Confidence 11 010000000 000100 000000000000 0 0 00000 1111111111111 11122
Q ss_pred HHHHH--HHHH-----------hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCC
Q 020633 233 IARVC--QYIQ-----------DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEP 296 (323)
Q Consensus 233 ~~~~~--~~~~-----------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 296 (323)
+.... +.+. -.+++|+||++++.|+.|.++|++.+....+.+.+ +++++..+ +||..-+-.|
T Consensus 413 ~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIggivnp 487 (560)
T TIGR01839 413 LLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQSILNP 487 (560)
T ss_pred HHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCccccccCC
Confidence 22111 0011 23678999999999999999999999999998865 57777776 5887654433
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-18 Score=104.08 Aligned_cols=78 Identities=36% Similarity=0.634 Sum_probs=71.8
Q ss_pred C-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 40 G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 40 g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
| +|+++.|.|.++ ++.+|+++||++.++. .|..+++.|+++||.|+++|+||||.|.+......+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 5 799999999873 7999999999998888 899999999999999999999999999988888889999999999887
Q ss_pred H
Q 020633 119 K 119 (323)
Q Consensus 119 ~ 119 (323)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-16 Score=120.50 Aligned_cols=254 Identities=15% Similarity=0.166 Sum_probs=100.5
Q ss_pred EEEEecCCCCCcceEEEEecCCCCCc--cccHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHhhcHHH
Q 020633 43 FTQSFLPLDQKVKATVYMTHGYGSDT--GWMFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
....+.+....+...||||.|++... -.+...+++.|.+.||.|+-+-++ |+|.+ ++++-++|+.+
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~ 92 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQ 92 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHH
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHH
Confidence 33444443323577999999997542 226788999997779999999876 44433 78888999999
Q ss_pred HHHHHHhcCCC--CCCCeEEEEechhHHHHHHHhhhcCC----CceeEEEEccCcccCCCCCchhhH---HHHHhhhhhh
Q 020633 117 FFKHVRDSEPY--RDLPGFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKPSKL---HLFMYGLLFG 187 (323)
Q Consensus 117 ~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~vl~~~~~~~~~~~~~~~~---~~~~~~~~~~ 187 (323)
++++++...+. ...+|+|+|||-|+.-+++|+..... ..|+++|+-+|..+.......... ..........
T Consensus 93 ~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~ 172 (303)
T PF08538_consen 93 LVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKE 172 (303)
T ss_dssp HHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHH
T ss_pred HHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHH
Confidence 99999987421 25689999999999999999987532 339999999998765443332211 2222222222
Q ss_pred hhcc-c--ccCCccccccccc-CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH---HHHHhcCCCCCcCEEEEeeCCCc
Q 020633 188 LADT-W--AAMPDNKMVGKAI-KDPEKLKVIASNPRRYTGKPRVGTMREIARVC---QYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 188 ~~~~-~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
.... . ...+. ....... ..+.....+.... ......+++... +.+...+.++++|+|++.+++|.
T Consensus 173 ~i~~g~~~~~lp~-~~~~~~~~~~PiTA~Rf~SL~-------s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DE 244 (303)
T PF08538_consen 173 LIAEGKGDEILPR-EFTPLVFYDTPITAYRFLSLA-------SPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDE 244 (303)
T ss_dssp HHHCT-TT-GG-----GGTTT-SS---HHHHHT-S--------SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT
T ss_pred HHHcCCCCceeec-cccccccCCCcccHHHHHhcc-------CCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCc
Confidence 1110 0 00000 0000000 1111111111000 001111222111 34567788999999999999999
Q ss_pred ccCchh-HHHHHHHcC---CC---CccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 261 VTCPTS-SKLLYEKAS---SA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~-~~~~~~~~~---~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+|... .+.+.+++. .+ ...-.+++|++|.+--...++..+.+.+.+..||+
T Consensus 245 yvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 245 YVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------------------
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 998643 223333331 11 12245889999999833333345678888888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-16 Score=125.03 Aligned_cols=128 Identities=18% Similarity=0.225 Sum_probs=98.4
Q ss_pred CC-cEEEEEecC--CCCCcceEEEEecCCCCCccccHHHH---------HHHHhhCCcEEEEecCCCCcCCCCCcccCCC
Q 020633 39 NG-KLFTQSFLP--LDQKVKATVYMTHGYGSDTGWMFQKI---------CISFATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 39 ~g-~l~~~~~~~--~~~~~~~~vv~~HG~~~~~~~~~~~~---------~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 106 (323)
|| +|...+|.| ...++.|+||..|+++.......... ...|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 78 999999999 55578899999999986431011111 12388999999999999999999876542
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
.....+|..++|+++..+ ++.+.+|.++|.|++|..++.+|...|.. +++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~-LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPH-LKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TT-EEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCC-ceEEEecccCCcccc
Confidence 566789999999999988 66677999999999999999999987777 999999888776655
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.3e-16 Score=123.21 Aligned_cols=249 Identities=10% Similarity=0.032 Sum_probs=148.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
.|+||++..+.++.....+.+++.|.. |+.|+..|+..-+..+..... .+++++++-+.+++++++ . ++++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~G------~-~v~l 172 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFLG------P-DIHV 172 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHhC------C-CCcE
Confidence 379999999886654355788899988 999999999877755322222 388999988888887773 2 4899
Q ss_pred EEechhHHHHHHHhhhc-----CCCceeEEEEccCcccCCCCCchhhHH------HHHhhhhhh------------hhcc
Q 020633 135 FGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLH------LFMYGLLFG------------LADT 191 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~-----p~~~v~~~vl~~~~~~~~~~~~~~~~~------~~~~~~~~~------------~~~~ 191 (323)
+|+|+||..++.+++.. |.+ ++.+++++++.+..........+ ..+...... ..+.
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~-~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQ-PRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCC-cceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 99999999977666554 556 99999999888765431111100 001111100 0110
Q ss_pred ccc-------CCcc------ccccccc-CC-hH---HHHHHh--cCCCCcCCCCchhHHHHHHHHHHHH---------Hh
Q 020633 192 WAA-------MPDN------KMVGKAI-KD-PE---KLKVIA--SNPRRYTGKPRVGTMREIARVCQYI---------QD 242 (323)
Q Consensus 192 ~~~-------~~~~------~~~~~~~-~~-~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 242 (323)
+.. .+.+ .+..... .+ +. ...+.. .+...+.......+...++....-. .-
T Consensus 252 ~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~V 331 (406)
T TIGR01849 252 FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRV 331 (406)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEe
Confidence 000 0000 0000000 00 00 000111 1111111111111111111111100 12
Q ss_pred cCCCCC-cCEEEEeeCCCcccCchhHHHHHHHc---CCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 243 NFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKA---SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 243 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+++|+ +|+|.|.|++|.++|++++..+.+.+ .+.+.+.++.+++||...+.-. ...++++..|.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~-r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS-RFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh-hhhhhhchHHHHHHHhC
Confidence 357888 99999999999999999999888874 4456667888889999986544 56788999999999763
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-16 Score=110.28 Aligned_cols=196 Identities=15% Similarity=0.160 Sum_probs=141.1
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCC-CCcCCCCCcc-------cCCChHHHhhc
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL-GHGRSDGIRC-------YLGDMEKVAAS 113 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~~~~-------~~~~~~~~~~d 113 (323)
|..+..+... ++..||++--+.+.....-+..+..++.+||.|+.+|+- |--.+..... ...+.+....+
T Consensus 28 ldaYv~gs~~--~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~ 105 (242)
T KOG3043|consen 28 LDAYVVGSTS--SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKD 105 (242)
T ss_pred eeEEEecCCC--CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhH
Confidence 5555566553 235666666665554424677889999999999999975 3222221110 11245556688
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+..++++++.... ..+|.++|++|||.++..+....+. +.++++.-|....
T Consensus 106 i~~v~k~lk~~g~--~kkIGv~GfCwGak~vv~~~~~~~~--f~a~v~~hps~~d------------------------- 156 (242)
T KOG3043|consen 106 ITAVVKWLKNHGD--SKKIGVVGFCWGAKVVVTLSAKDPE--FDAGVSFHPSFVD------------------------- 156 (242)
T ss_pred HHHHHHHHHHcCC--cceeeEEEEeecceEEEEeeccchh--heeeeEecCCcCC-------------------------
Confidence 9999999997754 6789999999999999988888774 7888777654321
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.+...++++|+|++.|+.|.++|++....+.+.
T Consensus 157 -----------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~ 189 (242)
T KOG3043|consen 157 -----------------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEK 189 (242)
T ss_pred -----------------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHH
Confidence 134466789999999999999999988888877
Q ss_pred cCCC---CccEEEecCCCccccc-----CCCc--hhHHHHHHHHHHHHHHHH
Q 020633 274 ASSA---DKSIKIYDGMYHSLIQ-----GEPD--ENANLVLKDMREWIDERV 315 (323)
Q Consensus 274 ~~~~---~~~~~~~~~~gH~~~~-----~~~~--~~~~~~~~~i~~fl~~~~ 315 (323)
+... +.++.++++.+|.+.. ..|+ ...++..+.+..||+.++
T Consensus 190 lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 190 LKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred HhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 7421 2469999999998873 2333 467888899999998775
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.9e-16 Score=111.31 Aligned_cols=153 Identities=18% Similarity=0.165 Sum_probs=97.9
Q ss_pred EEEecCCCCCccccHHH-HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 58 VYMTHGYGSDTGWMFQK-ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
|+++||++++....|.. +.+.|... ++|-..++- ..+.+++...+.+.+..+ ..++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~-----------~P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD-----------NPDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T-----------S--HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC-----------CCCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 68999999886545655 55566555 777766651 126677766666666543 33699999
Q ss_pred echhHHHHHHHh-hhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh
Q 020633 137 ESMGGAATMLMY-FQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 137 ~S~Gg~~a~~~a-~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
||+|+..+++++ .....+ |++++|++|+......... . .....
T Consensus 62 HSLGc~~~l~~l~~~~~~~-v~g~lLVAp~~~~~~~~~~---------------------~---~~~~f----------- 105 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKK-VAGALLVAPFDPDDPEPFP---------------------P---ELDGF----------- 105 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSS-EEEEEEES--SCGCHHCCT---------------------C---GGCCC-----------
T ss_pred eCHHHHHHHHHHhhccccc-ccEEEEEcCCCcccccchh---------------------h---hcccc-----------
Confidence 999999999999 555555 9999999987532000000 0 00000
Q ss_pred cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
.......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+..
T Consensus 106 ------------------------~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 106 ------------------------TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNA 155 (171)
T ss_dssp ------------------------TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSG
T ss_pred ------------------------ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccc
Confidence 00111234667899999999999999999999998 689999999999987
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.9e-15 Score=118.81 Aligned_cols=290 Identities=14% Similarity=0.086 Sum_probs=174.5
Q ss_pred ccccccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEEEecCCC
Q 020633 21 EYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVFAADLLG 93 (323)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~d~~G 93 (323)
+.....+.+.|++.+.+.|| -|......... +++|+|++.||+-+++. .| +.++-.|+++||+|..-+.||
T Consensus 39 ~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 39 EIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHHHHcCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcC
Confidence 44567789999999999999 55555444443 77999999999987765 34 346667889999999999999
Q ss_pred CcCCCCCc---------ccCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC--CceeEEEE
Q 020633 94 HGRSDGIR---------CYLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP--NTWTGLIF 161 (323)
Q Consensus 94 ~G~s~~~~---------~~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~v~~~vl 161 (323)
-..|.... -...++++++ .|+-+.|+++....+ ..+++.+|||.|+.+...++...|+ .+|+..++
T Consensus 117 n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~a 194 (403)
T KOG2624|consen 117 NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIA 194 (403)
T ss_pred cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcc--ccceEEEEEEccchhheehhcccchhhhhhheeee
Confidence 87776211 1123666755 799999999988754 6799999999999999998888765 23999999
Q ss_pred ccCcccCCCCCchhhHH-HHH---hhhhhhhhcccccCCccc----ccccccCCh-HH----------------HHHHhc
Q 020633 162 SAPLFVIPENMKPSKLH-LFM---YGLLFGLADTWAAMPDNK----MVGKAIKDP-EK----------------LKVIAS 216 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~----------------~~~~~~ 216 (323)
++|.............. ... ...+..+.......+... +........ .. ..+...
T Consensus 195 LAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~ 274 (403)
T KOG2624|consen 195 LAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTT 274 (403)
T ss_pred ecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhc
Confidence 99987544211111100 000 001111111111111110 000000000 00 000000
Q ss_pred C-CCCcCCCCchhHHHHHHHHHH-------------------------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 217 N-PRRYTGKPRVGTMREIARVCQ-------------------------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 217 ~-~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
. +..+...+.......+..... ...-.+.++++|+.+.+|++|.++.++.+..+
T Consensus 275 ~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~ 354 (403)
T KOG2624|consen 275 LLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLIL 354 (403)
T ss_pred ccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHH
Confidence 0 000111111111111111111 01123567799999999999999999999988
Q ss_pred HHHcCCCCccEEE-ecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 271 YEKASSADKSIKI-YDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 271 ~~~~~~~~~~~~~-~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
...+........+ +++-.|.-++- .....+.+.+.|.+.++...
T Consensus 355 ~~~~~~~~~~~~~~~~~ynHlDFi~-g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 355 LLVLPNSVIKYIVPIPEYNHLDFIW-GLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHhcccccccccccCCCccceeeee-ccCcHHHHHHHHHHHHHhhh
Confidence 8777322222222 78888987743 33457778888888887654
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.9e-15 Score=108.80 Aligned_cols=203 Identities=15% Similarity=0.186 Sum_probs=131.8
Q ss_pred EEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 45 QSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 45 ~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
.++.|...+..|+|||+||+..... .|..+.++++++||.|+++|+...+.. .-...++++.++++|+...
T Consensus 7 ~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 7 LVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred EEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhc
Confidence 4556666677899999999996666 699999999999999999997654321 1122234445555554332
Q ss_pred C--------CCCCCCeEEEEechhHHHHHHHhhhc-----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 125 E--------PYRDLPGFLFGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 125 ~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
. ..|-.++.|.|||-||-+|..++..+ ..+ ++++++++|.-.........
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~-~~ali~lDPVdG~~~~~~~~---------------- 140 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLR-FSALILLDPVDGMSKGSQTE---------------- 140 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccc-eeEEEEeccccccccccCCC----------------
Confidence 1 12456899999999999999998886 345 99999999986432211000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc---------cc
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG---------VT 262 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~---------~~ 262 (323)
...+. .....-+..+|+++|-..-+. ..
T Consensus 141 ------P~v~~-------------------------------------~~p~s~~~~~P~lviGtGLg~~~~~~~~~~Ca 177 (259)
T PF12740_consen 141 ------PPVLT-------------------------------------YTPQSFDFSMPALVIGTGLGGEPRNPLFPPCA 177 (259)
T ss_pred ------Ccccc-------------------------------------CcccccCCCCCeEEEecccCcccccccCCCCC
Confidence 00000 001122346899999777664 22
Q ss_pred Cc-hhHHHHHHHcCCCCccEEEecCCCcccccCCCc---------------------hhHHHHHHHHHHHHHHHHhh
Q 020633 263 CP-TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPD---------------------ENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---------------------~~~~~~~~~i~~fl~~~~~~ 317 (323)
|. ..-+++++.+..+ .-..+..+.||+-+++... ..++-+...+..|++..+..
T Consensus 178 P~g~n~~~Ff~~~~~p-~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g 253 (259)
T PF12740_consen 178 PAGVNYREFFDECKPP-SWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGGIMVAFLNAQLQG 253 (259)
T ss_pred CCCCCHHHHHHhcCCC-EEEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 32 2456777877543 5556668899999987661 23344555667787777653
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=123.76 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=85.2
Q ss_pred cceEEEEecCCCCCcc-ccHHH-HHHHHhh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 54 VKATVYMTHGYGSDTG-WMFQK-ICISFAT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~-~~~~~-~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
.+|++|++||++++.. ..|.. +...|.. ..|+|+++|++|+|.+...... ......++++.++++.+....+.+.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4789999999986532 13443 5555542 2599999999999988644322 2456777889999998865433335
Q ss_pred CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 130 LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+++|+||||||.+|..++...|++ |.++++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~r-V~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHK-VNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcc-eeEEEEEcCCCC
Confidence 6899999999999999999988988 999999998754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-16 Score=120.69 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=87.9
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccH-HHHHHHHh-hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-QKICISFA-TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 118 (323)
.+....+.+. +|++|++||++++....| ..+.+.+. ..+|.|+++|+++++.+.. .....+.....+++..++
T Consensus 26 ~~~~~~f~~~----~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~~a~~~~~~v~~~la~~l 100 (275)
T cd00707 26 SLKNSNFNPS----RPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY-PQAVNNTRVVGAELAKFL 100 (275)
T ss_pred hhhhcCCCCC----CCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh-HHHHHhHHHHHHHHHHHH
Confidence 5555545443 689999999998762244 34555444 4579999999998843321 111124566678888888
Q ss_pred HHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 119 KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 119 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+.+....+.+..+++++||||||.+|..++..++++ |+++++++|...
T Consensus 101 ~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~-v~~iv~LDPa~p 148 (275)
T cd00707 101 DFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGK-LGRITGLDPAGP 148 (275)
T ss_pred HHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCc-cceeEEecCCcc
Confidence 888765333356899999999999999999999987 999999998754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.1e-14 Score=94.50 Aligned_cols=187 Identities=15% Similarity=0.183 Sum_probs=123.1
Q ss_pred CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCC----CCcccCCC-hHHHhhcHHHHHHHHHhcCC
Q 020633 53 KVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSD----GIRCYLGD-MEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~----~~~~~~~~-~~~~~~d~~~~l~~l~~~~~ 126 (323)
....+||+-||.|.+.+ ......+..|+.+|+.|..++++..-... .++....+ -..++..+.++-+.+.
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~---- 87 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA---- 87 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc----
Confidence 44568999999986632 26778899999999999999998653322 11111112 2333333333333322
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccC
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK 206 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
..++++-|+||||-++.+++...... |+++++++-+...+.....
T Consensus 88 --~gpLi~GGkSmGGR~aSmvade~~A~-i~~L~clgYPfhppGKPe~-------------------------------- 132 (213)
T COG3571 88 --EGPLIIGGKSMGGRVASMVADELQAP-IDGLVCLGYPFHPPGKPEQ-------------------------------- 132 (213)
T ss_pred --CCceeeccccccchHHHHHHHhhcCC-cceEEEecCccCCCCCccc--------------------------------
Confidence 55899999999999999998876655 9999998754332221100
Q ss_pred ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC
Q 020633 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
. ..+.+..+++|+|+.+|+.|++-..+.+ ....-++..+++++++
T Consensus 133 --------------~------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~V---a~y~ls~~iev~wl~~ 177 (213)
T COG3571 133 --------------L------------------RTEHLTGLKTPTLITQGTRDEFGTRDEV---AGYALSDPIEVVWLED 177 (213)
T ss_pred --------------c------------------hhhhccCCCCCeEEeecccccccCHHHH---HhhhcCCceEEEEecc
Confidence 0 1356788999999999999998766555 2222346789999999
Q ss_pred CCcccccCC------CchhHHHHHHHHHHHHHH
Q 020633 287 MYHSLIQGE------PDENANLVLKDMREWIDE 313 (323)
Q Consensus 287 ~gH~~~~~~------~~~~~~~~~~~i~~fl~~ 313 (323)
+.|.+--.+ .+.......+.|..|+.+
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999875111 112344456667777654
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.7e-14 Score=111.41 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=136.3
Q ss_pred cCCC-cEEEEEecC--CCCCcceEEEEecCCCCC---ccccH-HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 37 TPNG-KLFTQSFLP--LDQKVKATVYMTHGYGSD---TGWMF-QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 37 ~~~g-~l~~~~~~~--~~~~~~~~vv~~HG~~~~---~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
...+ .+.++.|.| ....+.|+||++||++.. .. .. ..+...+...|+.|+++|||-..+ ..+..
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~-~~~~~~~~~~~~~g~~vv~vdYrlaPe--------~~~p~ 128 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLR-THDALVARLAAAAGAVVVSVDYRLAPE--------HPFPA 128 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChh-hhHHHHHHHHHHcCCEEEecCCCCCCC--------CCCCc
Confidence 3444 588888988 333458999999999743 23 33 344555566799999999994322 24555
Q ss_pred HhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 110 VAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
.++|+.+.++++... .+.+..+|+|+|+|.||.+++.++..-.++ ...+.+++.|..+... ........
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~---- 203 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGY---- 203 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhc----
Confidence 667777777776654 345678999999999999999988774421 2789999999877654 11100000
Q ss_pred hhhhhhcccccCCcccccccccCChHHH-HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
.. .......... ............... .....+ ....+.. -.|+++++|+.|.+.
T Consensus 204 ------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~spl------~~~~~~~-lPP~~i~~a~~D~l~ 259 (312)
T COG0657 204 ------------GE----ADLLDAAAILAWFADLYLGAAPDRED-PEASPL------ASDDLSG-LPPTLIQTAEFDPLR 259 (312)
T ss_pred ------------CC----ccccCHHHHHHHHHHHhCcCccccCC-CccCcc------ccccccC-CCCEEEEecCCCcch
Confidence 00 0000000000 000000000000000 000000 0111333 458999999999998
Q ss_pred CchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+ ..+.+.+++. +..++++.+++..|.+..... ....+....+.+|+.
T Consensus 260 ~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~a~~~~~~~~~~l~ 308 (312)
T COG0657 260 D--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PEARSALRQIAAFLR 308 (312)
T ss_pred h--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HHHHHHHHHHHHHHH
Confidence 7 5555555553 345688999999997753333 334444667777776
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=112.25 Aligned_cols=114 Identities=11% Similarity=0.145 Sum_probs=93.9
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhC---CcEEEEecCCCCcCCCCC-----cccCCChHHHhhcHHHHHHHHHhcCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATW---GYAVFAADLLGHGRSDGI-----RCYLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
+..+|+|+|.+|-.+ +|..+.+.|.+. .+.|+++.+.||-.++.. ....+++++.++...++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 578999999999988 899988888743 699999999999777654 34567899999999999998887531
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcC---CCceeEEEEccCcccCCC
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~~~~~~ 170 (323)
....+++++|||.|+++++.++.+.+ .+ |++++++-|....-.
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~-V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFR-VKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCc-eeEEEEeCCcccccc
Confidence 12669999999999999999999988 44 999999988765433
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-14 Score=101.75 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=105.0
Q ss_pred EEEecCCCCCccc-cHHHHHHHHhhCC--cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 58 VYMTHGYGSDTGW-MFQKICISFATWG--YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 58 vv~~HG~~~~~~~-~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
||++||+.++... -...+.+.+.+.+ ..+.++|++ ...+...+.+.++++.... ..++|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~------~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKP------ENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCC------CCeEE
Confidence 7999999877541 2344556666554 456666665 1455556667777766643 35999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|.||||..|..++.+++- ++ |+++|...+.... ...+.... .. .....+
T Consensus 64 iGSSlGG~~A~~La~~~~~---~a-vLiNPav~p~~~l---------~~~iG~~~---~~-----~~~e~~--------- 113 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYGL---PA-VLINPAVRPYELL---------QDYIGEQT---NP-----YTGESY--------- 113 (187)
T ss_pred EEEChHHHHHHHHHHHhCC---CE-EEEcCCCCHHHHH---------HHhhCccc---cC-----CCCccc---------
Confidence 9999999999999998864 44 8889876532111 00000000 00 000000
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
............+......-..+++++.++.|.+++...+. +.. .+...++.+|++|.+.
T Consensus 114 -------------~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~---~~~--~~~~~~i~~ggdH~f~-- 173 (187)
T PF05728_consen 114 -------------ELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAV---AKY--RGCAQIIEEGGDHSFQ-- 173 (187)
T ss_pred -------------eechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHH---HHh--cCceEEEEeCCCCCCc--
Confidence 00000000000001111223568999999999999985443 333 3445566788899887
Q ss_pred CCchhHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWI 311 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl 311 (323)
..++....|.+|+
T Consensus 174 ----~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 174 ----DFEEYLPQIIAFL 186 (187)
T ss_pred ----cHHHHHHHHHHhh
Confidence 2445777888876
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-14 Score=108.13 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=80.3
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
++|+|+|+.+++.. .|..+++.|....+.|+.++.+|.+... ....++++++++..+.|.....+ +++.|+
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~~~-----gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQPE-----GPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHTSS-----SSEEEE
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhCCC-----CCeeeh
Confidence 47999999999877 8999999997645899999999998322 22248899998888877766543 389999
Q ss_pred EechhHHHHHHHhhhc---CCCceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQS---EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~ 167 (323)
|||+||.+|+.+|.+. ... +..++++++...
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~-v~~l~liD~~~p 105 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEE-VSRLILIDSPPP 105 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-S-ESEEEEESCSST
T ss_pred ccCccHHHHHHHHHHHHHhhhc-cCceEEecCCCC
Confidence 9999999999999863 233 889999986543
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-15 Score=117.26 Aligned_cols=140 Identities=20% Similarity=0.185 Sum_probs=92.2
Q ss_pred cccCcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccc-----------------cHHHHHHHHhhCCc
Q 020633 24 TSQGVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW-----------------MFQKICISFATWGY 84 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~-----------------~~~~~~~~l~~~g~ 84 (323)
...+...+...|.+..+ .+..++..|.+ .++-|.||++||-++.... .-..++..|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 35677888888888888 99999999887 5788999999997754310 01236788999999
Q ss_pred EEEEecCCCCcCCCCCcccC----CChHHH---------------hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH
Q 020633 85 AVFAADLLGHGRSDGIRCYL----GDMEKV---------------AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM 145 (323)
Q Consensus 85 ~v~~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~ 145 (323)
.|+++|.+|+|+........ ++.+.+ +-|...++++|.....+++++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 99999999999986432111 111121 23445688889888888889999999999999999
Q ss_pred HHhhhcCCCceeEEEEccCc
Q 020633 146 LMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 146 ~~a~~~p~~~v~~~vl~~~~ 165 (323)
.+++..+. |++.|..+-.
T Consensus 242 ~LaALDdR--Ika~v~~~~l 259 (390)
T PF12715_consen 242 WLAALDDR--IKATVANGYL 259 (390)
T ss_dssp HHHHH-TT----EEEEES-B
T ss_pred HHHHcchh--hHhHhhhhhh
Confidence 99998655 8888876644
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.7e-13 Score=104.83 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=144.2
Q ss_pred eEEEcCCC-cEEEEEecCCCC---CcceEEEEecCCCCC----ccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCccc
Q 020633 33 KYFETPNG-KLFTQSFLPLDQ---KVKATVYMTHGYGSD----TGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~---~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~ 103 (323)
..+..... .|..++|.|... +..|.||++||+|.. ....|..+...+++. +..|+++|||=--+..-+
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P--- 140 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP--- 140 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC---
Confidence 34444444 788899998763 457999999999732 122677888887554 889999999943322211
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC-----CCceeEEEEccCcccCCCCCchhhHH
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE-----PNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
..+++..+.+.-+.++.-...+.|..+++|+|-|.||.+|..++.+.- ..++++.|++.|+.............
T Consensus 141 -a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~ 219 (336)
T KOG1515|consen 141 -AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQ 219 (336)
T ss_pred -ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHH
Confidence 133444444444444312234456789999999999999998887632 12399999999988765544332210
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHH-hcCCCCc--CCCCchhHHHHHHHHHHHHHhcCCCCCc-CEEEE
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI-ASNPRRY--TGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTV 254 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i 254 (323)
..... ..........++ ...+... ...+... .... ..........+ |+|++
T Consensus 220 ~~~~~-------------------~~~~~~~~~~~w~~~lP~~~~~~~~p~~n---p~~~---~~~~d~~~~~lp~tlv~ 274 (336)
T KOG1515|consen 220 NLNGS-------------------PELARPKIDKWWRLLLPNGKTDLDHPFIN---PVGN---SLAKDLSGLGLPPTLVV 274 (336)
T ss_pred hhcCC-------------------cchhHHHHHHHHHHhCCCCCCCcCCcccc---cccc---ccccCccccCCCceEEE
Confidence 00000 000000000000 0000000 0000000 0000 00112223344 59999
Q ss_pred eeCCCcccCchhHHHHHHHcCCC--CccEEEecCCCcccccCCCc-hhHHHHHHHHHHHHHHH
Q 020633 255 HGTADGVTCPTSSKLLYEKASSA--DKSIKIYDGMYHSLIQGEPD-ENANLVLKDMREWIDER 314 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~ 314 (323)
.++.|.+.. ....+.+++... .+++..++++.|.+++..+. ..+.++.+.+.+|+++.
T Consensus 275 ~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 275 VAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999998864 445555555433 34566789999999988776 67788999999999764
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=127.11 Aligned_cols=232 Identities=15% Similarity=0.110 Sum_probs=132.2
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc--------------CCCCCCCeEEEEech
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS--------------EPYRDLPGFLFGESM 139 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--------------~~~~~~~~~l~G~S~ 139 (323)
.+.+.|+++||.|+..|.||.|.|.+.... -.....+|..++|+++..+ .++..++|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 356788999999999999999999886432 1245578999999999842 233467999999999
Q ss_pred hHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh----hhhhhcccccCCcccccccccCC-hHHHHHH
Q 020633 140 GGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL----LFGLADTWAAMPDNKMVGKAIKD-PEKLKVI 214 (323)
Q Consensus 140 Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 214 (323)
||.+++.+|...|+. ++++|..++..+................. ...+. ...... .......... .......
T Consensus 348 ~G~~~~~aAa~~pp~-LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~-~~~~~r-~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 348 LGTLPNAVATTGVEG-LETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLA-ELTYSR-NLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHHHhhCCCc-ceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHH-HHhhhc-ccCcchhhcchHHHHHHH
Confidence 999999999988887 99999988765432111000000000000 00000 000000 0000000000 0000000
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC--CCccEEEecCCCcccc
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLI 292 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 292 (323)
........ .. .....++.... .+...+.++++|+|+|+|..|..++++.+.++++.+.. ...++.+.+ .+|...
T Consensus 425 ~~~~~~~~-~~-~~~y~~fW~~r-n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~ 500 (767)
T PRK05371 425 AELTAAQD-RK-TGDYNDFWDDR-NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYP 500 (767)
T ss_pred hhhhhhhh-hc-CCCccHHHHhC-CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCC
Confidence 00000000 00 00000111111 13345678999999999999999998888888887742 235565544 578654
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 293 QGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
. .....++.+.+.+||+.++..
T Consensus 501 ~---~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 501 N---NWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred C---chhHHHHHHHHHHHHHhcccc
Confidence 2 223456788889999988764
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9e-14 Score=108.75 Aligned_cols=277 Identities=13% Similarity=0.087 Sum_probs=157.7
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCC-cceEEEEecCCCCCcc----ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQK-VKATVYMTHGYGSDTG----WMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~-~~~~vv~~HG~~~~~~----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
+..++..+...+..+.+..|.|...+ -+++++++|.+-.... ..-..++..|.++|+.|+.+++++-..+..
T Consensus 79 va~tpg~vV~~ndv~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--- 155 (445)
T COG3243 79 VATTPGKVVFRNDVLELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--- 155 (445)
T ss_pred hhcCCceEEEeechhhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---
Confidence 33444444444333444455554422 4678999998753211 022467889999999999999997766644
Q ss_pred cCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh-----
Q 020633 103 YLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK----- 176 (323)
Q Consensus 103 ~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~----- 176 (323)
..++++++ +.+...++.+....+ .++|.++|+|.||.++..+++.++.++|+.++++.+..++........
T Consensus 156 -~~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~ 232 (445)
T COG3243 156 -AKNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEA 232 (445)
T ss_pred -hccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHH
Confidence 23788888 788888887776643 468999999999999999888888767999998887766554222111
Q ss_pred HHHHHhhhh--hhhhcccc------cCCccccc-----ccccC----ChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--
Q 020633 177 LHLFMYGLL--FGLADTWA------AMPDNKMV-----GKAIK----DPEKLKVIASNPRRYTGKPRVGTMREIARVC-- 237 (323)
Q Consensus 177 ~~~~~~~~~--~~~~~~~~------~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (323)
....+...+ ....+.+. ......+. ..... -+........+.. .........+.+.+
T Consensus 233 ~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst----~~~~~~~~~~Lrn~y~ 308 (445)
T COG3243 233 TIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADST----RLPGAAHSEYLRNFYL 308 (445)
T ss_pred HHHHHHhhhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCc----cCchHHHHHHHHHHHH
Confidence 001110000 00111100 00000000 00000 0001111111111 11122222222211
Q ss_pred --HHH---------HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC-CchhHHHHHH
Q 020633 238 --QYI---------QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-PDENANLVLK 305 (323)
Q Consensus 238 --~~~---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~ 305 (323)
.-. .-.+.+|+||++.+.|++|.++|.+.+....+.+++ .++++..+ +||...+-. |.....+.+.
T Consensus 309 ~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~vVN~p~~~k~~~w~ 386 (445)
T COG3243 309 ENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAGVVNPPGNAKYQYWT 386 (445)
T ss_pred hChhhccceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEEEeCCcchhhhhcCC
Confidence 101 124678999999999999999999999888888843 35555555 799876544 3333333444
Q ss_pred ----HHHHHHHHHHh
Q 020633 306 ----DMREWIDERVE 316 (323)
Q Consensus 306 ----~i~~fl~~~~~ 316 (323)
.+..|+.+...
T Consensus 387 n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 387 NLPADAEAWLSGAKE 401 (445)
T ss_pred CCcchHHHHHHhhcc
Confidence 77788876543
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.7e-15 Score=110.05 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=73.5
Q ss_pred EEEecCCCCC---ccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc---CCCCCC
Q 020633 58 VYMTHGYGSD---TGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS---EPYRDL 130 (323)
Q Consensus 58 vv~~HG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 130 (323)
||++||++.. .. ....++..+++ .|+.|+.+|+|-.. ...+.+..+|+.++++++... .+.+..
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~p--------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLAP--------EAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---TT--------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeeccccc--------cccccccccccccceeeecccccccccccc
Confidence 7999999854 33 34556666665 79999999999331 126778889999999988876 233467
Q ss_pred CeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVI 168 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~ 168 (323)
+++|+|+|.||.+++.++....+ ..++++++++|..+.
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999876322 238999999997765
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-14 Score=123.49 Aligned_cols=119 Identities=17% Similarity=0.081 Sum_probs=91.1
Q ss_pred ceeEEEcCCC-cEEEEEecCCC------CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC---
Q 020633 31 GKKYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--- 100 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--- 100 (323)
....+..+++ +|.|...+... ....|+||++||++++.. .|..+++.|+++||+|+++|+||||.|...
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccc
Confidence 3346667777 77776654331 123579999999999888 899999999989999999999999999432
Q ss_pred -------cc---c---------CCChHHHhhcHHHHHHHHH------hc----CCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 101 -------RC---Y---------LGDMEKVAASSLSFFKHVR------DS----EPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 101 -------~~---~---------~~~~~~~~~d~~~~l~~l~------~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.. + ..++++.+.|+..+...+. .+ ...+..+++++||||||.++..++..
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 1267899999999999887 22 11336699999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=118.91 Aligned_cols=227 Identities=16% Similarity=0.166 Sum_probs=146.6
Q ss_pred CC-cEEEEEecCCC---CCcceEEEEecCCCCCc----c--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-----cc
Q 020633 39 NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----G--WMFQKICISFATWGYAVFAADLLGHGRSDGIR-----CY 103 (323)
Q Consensus 39 ~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~----~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~ 103 (323)
+| ...+....|++ .++-|.+|.+||++++. . ..|... .+...|+.|+.+|.||.|.....- ..
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~ 583 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRN 583 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhh
Confidence 78 89899998864 35678999999998632 1 122222 355679999999999987664221 11
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+ .-++|...+++.+....-+|..++.++|+|.||.+++.++...++..+++.+.++|..+.. ........+
T Consensus 584 lG~--~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~ter---- 656 (755)
T KOG2100|consen 584 LGD--VEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTER---- 656 (755)
T ss_pred cCC--cchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHh----
Confidence 111 1235555555655555556688999999999999999999998855477779999987643 111000000
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCE-EEEeeCCCccc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF-LTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~i~g~~D~~~ 262 (323)
.+.....+.. ...+.. ....+..++.|. |++||+.|..|
T Consensus 657 ----------------ymg~p~~~~~--~y~e~~----------------------~~~~~~~~~~~~~LliHGt~DdnV 696 (755)
T KOG2100|consen 657 ----------------YMGLPSENDK--GYEESS----------------------VSSPANNIKTPKLLLIHGTEDDNV 696 (755)
T ss_pred ----------------hcCCCccccc--hhhhcc----------------------ccchhhhhccCCEEEEEcCCcCCc
Confidence 0000000000 000000 123344455555 99999999999
Q ss_pred CchhHHHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 263 CPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.+++..+.+++.. -..++.++|+.+|.+.. ......+...+..|+...+..
T Consensus 697 h~q~s~~~~~aL~~~gv~~~~~vypde~H~is~---~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 697 HFQQSAILIKALQNAGVPFRLLVYPDENHGISY---VEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred CHHHHHHHHHHHHHCCCceEEEEeCCCCccccc---ccchHHHHHHHHHHHHHHcCc
Confidence 99999988888743 23678899999999983 233356888999999976654
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-13 Score=99.30 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=90.5
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.....++.|..++..|+|+|+||+.-... .|..+..+++.+||.|+++++-..- . + +-.+.+++..++++|
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~-~--p-----~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLF-P--P-----DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhccc-C--C-----CchHHHHHHHHHHHH
Confidence 45666777877778999999999987766 8999999999999999999986421 1 1 223334556666666
Q ss_pred HHhcC--------CCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCC
Q 020633 121 VRDSE--------PYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 121 l~~~~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~ 169 (323)
+.... ..+-.++.++|||.||-.|..+|..+ .+.+++++|.++|.....
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 65431 12356899999999999999999887 455589999999987644
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.6e-13 Score=98.82 Aligned_cols=123 Identities=14% Similarity=0.079 Sum_probs=85.4
Q ss_pred EEEEEecCCCC--CcceEEEEecCCCCCccccHHHH--HHHHhh-CCcEEEEecCCCCcCCCCCc----ccCCChHHHhh
Q 020633 42 LFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKI--CISFAT-WGYAVFAADLLGHGRSDGIR----CYLGDMEKVAA 112 (323)
Q Consensus 42 l~~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~--~~~l~~-~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~ 112 (323)
|.|.+|.|++. .+.|+||++||.+.+.. .+... ...|++ +||.|+.++........... .....-.....
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 46888988752 35699999999998765 33221 123444 58999988854221111000 00001112245
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+.++++++..++.+|..+|++.|+|.||.++..++..+|+. +.++...++..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~-faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDL-FAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCcc-ceEEEeecccc
Confidence 677888989888889999999999999999999999999999 99888776653
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-13 Score=111.35 Aligned_cols=189 Identities=17% Similarity=0.244 Sum_probs=104.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCC------CCC---cc-----c-------CC------
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRS------DGI---RC-----Y-------LG------ 105 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s------~~~---~~-----~-------~~------ 105 (323)
++.|+|||-||++++.. .|..++..|+.+||.|+++|.|..-.+ +.. .. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 45799999999999887 899999999999999999999953211 000 00 0 00
Q ss_pred -------ChHHHhhcHHHHHHHHHhcC--------------------CCCCCCeEEEEechhHHHHHHHhhhcCCCceeE
Q 020633 106 -------DMEKVAASSLSFFKHVRDSE--------------------PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTG 158 (323)
Q Consensus 106 -------~~~~~~~d~~~~l~~l~~~~--------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~ 158 (323)
-++.-+.++..+++.+..-. .++..+++++|||+||..++..+.+. .+ +++
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r-~~~ 254 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TR-FKA 254 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cC-cce
Confidence 01122355666666554210 01234799999999999999888776 44 999
Q ss_pred EEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH
Q 020633 159 LIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ 238 (323)
Q Consensus 159 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (323)
.|+++|+...-.
T Consensus 255 ~I~LD~W~~Pl~-------------------------------------------------------------------- 266 (379)
T PF03403_consen 255 GILLDPWMFPLG-------------------------------------------------------------------- 266 (379)
T ss_dssp EEEES---TTS---------------------------------------------------------------------
T ss_pred EEEeCCcccCCC--------------------------------------------------------------------
Confidence 999998753110
Q ss_pred HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHc-CCCCccEEEecCCCcccccC-------------------CCch
Q 020633 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA-SSADKSIKIYDGMYHSLIQG-------------------EPDE 298 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~-------------------~~~~ 298 (323)
.+....++.|+|+|+.+. +.-.+....+.+.. ...+..++.+.|+.|..+-+ +|..
T Consensus 267 --~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~ 342 (379)
T PF03403_consen 267 --DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPER 342 (379)
T ss_dssp --GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHH
T ss_pred --cccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHH
Confidence 112245678999998874 22222333333222 12456788999999986522 2334
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 020633 299 NANLVLKDMREWIDERVE 316 (323)
Q Consensus 299 ~~~~~~~~i~~fl~~~~~ 316 (323)
..+...+.+.+||++++.
T Consensus 343 a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 343 ALRINNRASLAFLRRHLG 360 (379)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 566778889999999975
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.6e-14 Score=98.10 Aligned_cols=198 Identities=14% Similarity=0.106 Sum_probs=128.7
Q ss_pred CcEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 40 GKLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 40 g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
|+-...+|++. +..+..||+||+-.... ..--.++..+.++||+|.++++ +.+... .++++.+.++...
T Consensus 54 g~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~----htL~qt~~~~~~g 124 (270)
T KOG4627|consen 54 GRQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQV----HTLEQTMTQFTHG 124 (270)
T ss_pred CceEEEEecCC--CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCccc----ccHHHHHHHHHHH
Confidence 35667888875 55789999999753211 0112344556678999999864 444322 2677777777777
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
++++-...+ ..+.+.+-|||.|+.+|+.+..+..+.+|.++++.++.+.......... .
T Consensus 125 v~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~------------------g-- 183 (270)
T KOG4627|consen 125 VNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTES------------------G-- 183 (270)
T ss_pred HHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcc------------------c--
Confidence 777766544 1335778899999999999888754444999999998765332111000 0
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
..++..... ..........+..+++|+|++.|+.|.---.++.+.+...+ .
T Consensus 184 -~dlgLt~~~--------------------------ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~--~ 234 (270)
T KOG4627|consen 184 -NDLGLTERN--------------------------AESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL--R 234 (270)
T ss_pred -cccCcccch--------------------------hhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh--h
Confidence 000000000 00000012345678899999999999766678888888888 5
Q ss_pred CccEEEecCCCcccccCCC
Q 020633 278 DKSIKIYDGMYHSLIQGEP 296 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~ 296 (323)
.+.+..+++.+|+-.+++.
T Consensus 235 ~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 235 KASFTLFKNYDHYDIIEET 253 (270)
T ss_pred hcceeecCCcchhhHHHHh
Confidence 6889999999999886544
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.6e-12 Score=98.01 Aligned_cols=222 Identities=12% Similarity=-0.001 Sum_probs=127.2
Q ss_pred CcceEEEEecCCCCCccccHHHH-HHHHhhCCcEEEEecCCCCcCCCCCcccC---CCh-------HHHhhcHHHHHHHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKI-CISFATWGYAVFAADLLGHGRSDGIRCYL---GDM-------EKVAASSLSFFKHV 121 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~~~-------~~~~~d~~~~l~~l 121 (323)
..+|.+|.+.|.|.+.-|.-..+ +..|.++|+..+.+..|-||...+..... .++ ...+.+...+++++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999987654333445 78888889999999999999876332211 122 23346777888888
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC----CCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE----NMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
..+ + ..++.+.|.||||.+|...+...|.. +..+-++++...... .+.....+..+...+... ....
T Consensus 170 ~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~p-v~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~----~~~~- 240 (348)
T PF09752_consen 170 ERE-G--YGPLGLTGISMGGHMAALAASNWPRP-VALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDT----VYEE- 240 (348)
T ss_pred Hhc-C--CCceEEEEechhHhhHHhhhhcCCCc-eeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhccc----chhh-
Confidence 887 3 66999999999999999999999986 766666654332111 000000111111110000 0000
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc-----CEEEEeeCCCcccCchhHHHHHH
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV-----PFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
................. ............+....+ ....+.+..+ .+.+|.+++|..||...+..+.+
T Consensus 241 --~~~~~~~~~~~~~~~~~----~~~~~~~Ea~~~m~~~md-~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 241 --EISDIPAQNKSLPLDSM----EERRRDREALRFMRGVMD-SFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred --hhcccccCcccccchhh----ccccchHHHHHHHHHHHH-hhccccccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 00000000000000000 000001111111111111 1223333333 47899999999999999999999
Q ss_pred HcCCCCccEEEecCCCccccc
Q 020633 273 KASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~ 293 (323)
.. +++++.++++ ||...+
T Consensus 314 ~W--PGsEvR~l~g-GHVsA~ 331 (348)
T PF09752_consen 314 IW--PGSEVRYLPG-GHVSAY 331 (348)
T ss_pred hC--CCCeEEEecC-CcEEEe
Confidence 99 8899999997 997653
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-13 Score=102.86 Aligned_cols=180 Identities=10% Similarity=0.020 Sum_probs=89.7
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+-+..++++|.....++..+|.|+|.|.||-+|+.+|..+|+ |+++|.++|............... ...+.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~--i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~ 74 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ--ISAVVAISPSSVVFQGIGFYRDSS-------KPLPY 74 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS--EEEEEEES--SB--SSEEEETTE---------EE--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC--ccEEEEeCCceeEecchhcccCCC-------ccCCc
Confidence 446778888888877677899999999999999999999995 999999998765443221110000 00000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHH
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLL 270 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~ 270 (323)
.......... ..................... ...-.+.++++|+|+|.|++|...|... ++.+
T Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i 138 (213)
T PF08840_consen 75 LPFDISKFSW-NEPGLLRSRYAFELADDKAVE---------------EARIPVEKIKGPILLISGEDDQIWPSSEMAEQI 138 (213)
T ss_dssp --B-GGG-EE--TTS-EE-TT-B--TTTGGGC---------------CCB--GGG--SEEEEEEETT-SSS-HHHHHHHH
T ss_pred CCcChhhcee-cCCcceehhhhhhcccccccc---------------cccccHHHcCCCEEEEEeCCCCccchHHHHHHH
Confidence 0000000000 000000000000000000000 0012356789999999999999998654 4444
Q ss_pred HHHcC---CC-CccEEEecCCCcccccCC-C--------------------c---hhHHHHHHHHHHHHHHHHh
Q 020633 271 YEKAS---SA-DKSIKIYDGMYHSLIQGE-P--------------------D---ENANLVLKDMREWIDERVE 316 (323)
Q Consensus 271 ~~~~~---~~-~~~~~~~~~~gH~~~~~~-~--------------------~---~~~~~~~~~i~~fl~~~~~ 316 (323)
.+++. .+ +.+++.|+++||.+..-- | + ...++.+..+++||++++.
T Consensus 139 ~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 139 EERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55442 12 468889999999975210 0 0 1456788999999999875
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-12 Score=107.06 Aligned_cols=235 Identities=16% Similarity=0.111 Sum_probs=145.0
Q ss_pred ccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc----cccHHH--HHHHHhhCCcEEEEecCCCCcCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQK--ICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~----~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
+.+-+.+.+..| .++..+|.|.+ +++.|+|+++-|+++-. .+.+.. -...|+..||.|+.+|-||.....
T Consensus 612 p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRG 691 (867)
T KOG2281|consen 612 PPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRG 691 (867)
T ss_pred ChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccc
Confidence 335566778778 89999999875 35689999999998531 111211 234688899999999999875543
Q ss_pred CC-------cccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 99 GI-------RCYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 99 ~~-------~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
-. .-....+++.++- ++.|..+.+ +|-++|.|-|+|+||++++....++|+- ++..|.-+|......
T Consensus 692 lkFE~~ik~kmGqVE~eDQVeg----lq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I-frvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 692 LKFESHIKKKMGQVEVEDQVEG----LQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI-FRVAIAGAPVTDWRL 766 (867)
T ss_pred hhhHHHHhhccCeeeehhhHHH----HHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce-eeEEeccCcceeeee
Confidence 11 1111133444444 444444442 4577999999999999999999999997 777777776543211
Q ss_pred CCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC
Q 020633 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 250 (323)
. +....+.+...+..-.......... ...+.+..-...
T Consensus 767 Y-----------------------------------DTgYTERYMg~P~~nE~gY~agSV~-------~~VeklpdepnR 804 (867)
T KOG2281|consen 767 Y-----------------------------------DTGYTERYMGYPDNNEHGYGAGSVA-------GHVEKLPDEPNR 804 (867)
T ss_pred e-----------------------------------cccchhhhcCCCccchhcccchhHH-------HHHhhCCCCCce
Confidence 0 0000000111110000000000000 022334444556
Q ss_pred EEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 251 FLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.|++||--|.-|.......+...+- ++.-+++++|+..|.+-- .+...-+-..+..|+.+
T Consensus 805 LlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~---~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 805 LLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN---PESGIYYEARLLHFLQE 866 (867)
T ss_pred EEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC---CccchhHHHHHHHHHhh
Confidence 8999999999998877777766652 345689999999998863 23334455677888764
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=107.87 Aligned_cols=137 Identities=16% Similarity=0.135 Sum_probs=107.3
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEec--CCCCCc--cccHHHHHH---HHhhCCcEEEEecCCCCcCCCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTH--GYGSDT--GWMFQKICI---SFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~H--G~~~~~--~~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
+-.....+++.|| +|+..+|.|.+.++.|+++..+ ...-.. ...-..... .++.+||.|+..|.||.|.|.+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG 96 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCc
Confidence 4445688999999 9999999999878899999999 333221 001122233 5788999999999999999998
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
......+ +-++|-.++|+++..+ ++.+++|..+|.|++|...+.+|+..|.. +++++...+..+.
T Consensus 97 ~~~~~~~--~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa-Lkai~p~~~~~D~ 161 (563)
T COG2936 97 VFDPESS--REAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPA-LKAIAPTEGLVDR 161 (563)
T ss_pred ccceecc--ccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCch-heeeccccccccc
Confidence 7665444 4578888899988874 45578999999999999999999998877 8888887776653
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=96.83 Aligned_cols=122 Identities=15% Similarity=0.059 Sum_probs=76.8
Q ss_pred CCC-cEEEEEecCCC---CCcc-eEEEEecCCCCCccccHHHHHH-------HHhhCCcEEEEecCCC-CcCCCCCcccC
Q 020633 38 PNG-KLFTQSFLPLD---QKVK-ATVYMTHGYGSDTGWMFQKICI-------SFATWGYAVFAADLLG-HGRSDGIRCYL 104 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~---~~~~-~~vv~~HG~~~~~~~~~~~~~~-------~l~~~g~~v~~~d~~G-~G~s~~~~~~~ 104 (323)
..| +|.|+.|.|.+ .++. |.|||+||.|..+......+.. ..-+.++-|+++.+-- +-.++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~----- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE----- 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-----
Confidence 345 99999999954 1334 9999999998654422222211 1111223333333110 000111
Q ss_pred CChHHHhhcHHHHH-HHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 105 GDMEKVAASSLSFF-KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 105 ~~~~~~~~d~~~~l-~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..+.+......++ +.+..++.+|..+|+++|.|+||..++.++.++|+. +.+.+++++..
T Consensus 244 -~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf-FAaa~~iaG~~ 304 (387)
T COG4099 244 -KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF-FAAAVPIAGGG 304 (387)
T ss_pred -ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh-hheeeeecCCC
Confidence 1122223333334 477778888899999999999999999999999999 99999988654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-12 Score=96.92 Aligned_cols=209 Identities=20% Similarity=0.191 Sum_probs=122.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHh-hCCc--E--EEEecCCCC----cCCCC---C-------cccC-CChHHHhh
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFA-TWGY--A--VFAADLLGH----GRSDG---I-------RCYL-GDMEKVAA 112 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~-~~g~--~--v~~~d~~G~----G~s~~---~-------~~~~-~~~~~~~~ 112 (323)
....|.||+||++++.. .+..++..+. ++|. . ++.++--|. |.-.. . .... .++...+.
T Consensus 9 ~~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cCCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 34679999999999877 8999999997 6554 2 344444443 22111 0 0111 25778899
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC---C-ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP---N-TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.+..++.+|..++. -.++-+|||||||..++.++..+.. . .+..+|.+++++..........
T Consensus 88 wl~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~------------ 153 (255)
T PF06028_consen 88 WLKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ------------ 153 (255)
T ss_dssp HHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T------------
T ss_pred HHHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc------------
Confidence 99999999999987 6689999999999999999887432 1 2899999887655321111000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeC------CCcc
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGT------ADGV 261 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~------~D~~ 261 (323)
....+... + .......+...... +..+++ ++.+|-|.|. .|..
T Consensus 154 -------~~~~~~~~-------------------g---p~~~~~~y~~l~~~~~~~~p~-~i~VLnI~G~~~~g~~sDG~ 203 (255)
T PF06028_consen 154 -------NQNDLNKN-------------------G---PKSMTPMYQDLLKNRRKNFPK-NIQVLNIYGDLEDGSNSDGI 203 (255)
T ss_dssp -------TTT-CSTT-----------------------BSS--HHHHHHHHTHGGGSTT-T-EEEEEEEESBTTCSBTSS
T ss_pred -------hhhhhccc-------------------C---CcccCHHHHHHHHHHHhhCCC-CeEEEEEecccCCCCCCCeE
Confidence 00000000 0 00011111111111 122222 6789999998 7889
Q ss_pred cCchhHHHHHHHcCC--CCccEEEecC--CCcccccCCCchhHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASS--ADKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
||...++.+...+.. ...+-.++.| +.|.-..+.+ ++.+.|.+||
T Consensus 204 V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-----~V~~~I~~FL 252 (255)
T PF06028_consen 204 VPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-----QVDKLIIQFL 252 (255)
T ss_dssp SBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-----HHHHHHHHHH
T ss_pred EeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-----HHHHHHHHHh
Confidence 998888877777743 2334555544 6898885443 3888888887
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=100.88 Aligned_cols=240 Identities=20% Similarity=0.182 Sum_probs=139.5
Q ss_pred ccCcc-cceeEEEcCC-C-cEEEEEecCCCC-C-----cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-
Q 020633 25 SQGVR-NGKKYFETPN-G-KLFTQSFLPLDQ-K-----VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH- 94 (323)
Q Consensus 25 ~~~~~-~~~~~~~~~~-g-~l~~~~~~~~~~-~-----~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~- 94 (323)
..+.. ...+.+.... + ++....+.+... . ..|+|++-||.|+... .|..+++.|++.||.|.++|.+|.
T Consensus 32 ~~g~~~~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~ 110 (365)
T COG4188 32 PEGVALFVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSN 110 (365)
T ss_pred ccCcceEEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcc
Confidence 33443 3334444433 3 677777766542 2 5799999999998877 899999999999999999999985
Q ss_pred -cCCCCCccc-----CCChHHHhhcHHHHHHHHHhc---C----CCCCCCeEEEEechhHHHHHHHhhhcCCCc------
Q 020633 95 -GRSDGIRCY-----LGDMEKVAASSLSFFKHVRDS---E----PYRDLPGFLFGESMGGAATMLMYFQSEPNT------ 155 (323)
Q Consensus 95 -G~s~~~~~~-----~~~~~~~~~d~~~~l~~l~~~---~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~------ 155 (323)
|..+..... ...+-+...|+..+|++|... . ..+..+|.++|||+||+.++.++..+.+..
T Consensus 111 ~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C 190 (365)
T COG4188 111 AGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHC 190 (365)
T ss_pred cccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHh
Confidence 333311110 012335567888888887766 2 145679999999999999999887654420
Q ss_pred -eeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH
Q 020633 156 -WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 156 -v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
..+.++..+... . ...+. .....+. .......+++..+..+..++..-.. .
T Consensus 191 ~~~~~~~~~~~~~------~---~~~l~----q~~av~~-----~~~~~~~rDpriravvA~~p~~~~~-------F--- 242 (365)
T COG4188 191 ESASRICLDPPGL------N---GRLLN----QCAAVWL-----PRQAYDLRDPRIRAVVAINPALGMI-------F--- 242 (365)
T ss_pred hhhhhcccCCCCc------C---hhhhc----ccccccc-----chhhhccccccceeeeeccCCcccc-------c---
Confidence 000111111000 0 00000 0000000 0011111222211111111110000 0
Q ss_pred HHHHHHHhcCCCCCcCEEEEeeCCCcccCch-hHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
-...+.++++|++++.|..|.+.|.. .....+..+.+....+..++++.|+.+++...+
T Consensus 243 -----g~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 243 -----GTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred -----ccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 13456788999999999999987754 344556667555557888999999999765554
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.4e-12 Score=87.84 Aligned_cols=176 Identities=13% Similarity=0.011 Sum_probs=113.0
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
+.+|++||++++....|+...+.-. -.+-.+++. .-.....+++++.+.+.+... .++++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-------~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD--------DWEAPVLDDWIARLEKEVNAA-------EGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC--------CCCCCCHHHHHHHHHHHHhcc-------CCCeEEE
Confidence 5789999998876546655433211 112223322 111126777777777766665 2369999
Q ss_pred EechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh
Q 020633 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA 215 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (323)
+||+|+.+++.++...... |.|+++++|+-..........
T Consensus 65 AHSLGc~~v~h~~~~~~~~-V~GalLVAppd~~~~~~~~~~--------------------------------------- 104 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQ-VAGALLVAPPDVSRPEIRPKH--------------------------------------- 104 (181)
T ss_pred EecccHHHHHHHHHhhhhc-cceEEEecCCCccccccchhh---------------------------------------
Confidence 9999999999999886665 999999998743221100000
Q ss_pred cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC
Q 020633 216 SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 295 (323)
...+. .....++.-|.+++.+.+|++++++.++.+++.+ +..++....+||... +.
T Consensus 105 --~~tf~------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~-~s 160 (181)
T COG3545 105 --LMTFD------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINA-ES 160 (181)
T ss_pred --ccccC------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccch-hh
Confidence 00000 0112334569999999999999999999999998 467888888888776 22
Q ss_pred CchhHHHHHHHHHHHHHH
Q 020633 296 PDENANLVLKDMREWIDE 313 (323)
Q Consensus 296 ~~~~~~~~~~~i~~fl~~ 313 (323)
.-....+....+.+|+.+
T Consensus 161 G~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 161 GFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCcHHHHHHHHHHhhh
Confidence 223344456666666543
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-12 Score=90.05 Aligned_cols=103 Identities=19% Similarity=0.181 Sum_probs=83.3
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
..+||+-|=|+-.. .-..+++.|+++|+.|+.+|-+-|=.+.. +.++.+.|+..++++...+.. ..+++|+
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w~--~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARWG--RKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHhC--CceEEEE
Confidence 56788888776655 66789999999999999999876655532 678889999999999888865 7799999
Q ss_pred EechhHHHHHHHhhhcCCC---ceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQSEPN---TWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~ 167 (323)
|+|+|+-+.-....+.|.. +|+.++|++|...
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999998887777766531 3999999988643
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-12 Score=98.44 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=91.7
Q ss_pred EcCCC-cEEEEEecCCCC---CcceEEEEecCCCCCccccHHHHHHHHhhC---------CcEEEEecCCCCcCCCCCcc
Q 020633 36 ETPNG-KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQKICISFATW---------GYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~~ 102 (323)
+...| +||+....++.. +.-.+++++|||+|+-. .|-.++..|.+. -|.||++.+||+|.|+++..
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 34578 999998887642 23358999999999876 666777777543 27899999999999997765
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
...+..+.+.-+..++-.++ -.++.|-|-.+|+.|+..+|..+|++ |.|+-+-.
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg------~nkffiqGgDwGSiI~snlasLyPen-V~GlHlnm 261 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLG------YNKFFIQGGDWGSIIGSNLASLYPEN-VLGLHLNM 261 (469)
T ss_pred CCccHHHHHHHHHHHHHHhC------cceeEeecCchHHHHHHHHHhhcchh-hhHhhhcc
Confidence 54455665555555555554 44899999999999999999999998 88776533
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-11 Score=88.08 Aligned_cols=180 Identities=15% Similarity=0.152 Sum_probs=113.2
Q ss_pred cceEEEEecCCCCCccccHH----HHHHHHhhCCcEEEEecCCC----CcCCC--C------Cc------c--------c
Q 020633 54 VKATVYMTHGYGSDTGWMFQ----KICISFATWGYAVFAADLLG----HGRSD--G------IR------C--------Y 103 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~----~~~~~l~~~g~~v~~~d~~G----~G~s~--~------~~------~--------~ 103 (323)
.++-|||+||+-.+.. .|. .+.+.|.+. +..+.+|-|- -+.+. . +. . .
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 4688999999987655 443 345556555 7778777662 01111 0 00 0 0
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh---------cCCCceeEEEEccCcccCCCCCch
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ---------SEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---------~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
.......-+.+..+.+++....+. -.|+|+|.|+.++..++.. +|. ++-+|+++++........
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF----DGllGFSQGA~laa~l~~~~~~~~~~~~~P~--~kF~v~~SGf~~~~~~~~- 154 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF----DGLLGFSQGAALAALLAGLGQKGLPYVKQPP--FKFAVFISGFKFPSKKLD- 154 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC----ccccccchhHHHHHHhhcccccCCcccCCCC--eEEEEEEecCCCCcchhh-
Confidence 001111223355566666665432 3599999999999988872 122 678888887643210000
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
-......+++|.|-|
T Consensus 155 -----------------------------------------------------------------~~~~~~~i~~PSLHi 169 (230)
T KOG2551|consen 155 -----------------------------------------------------------------ESAYKRPLSTPSLHI 169 (230)
T ss_pred -----------------------------------------------------------------hhhhccCCCCCeeEE
Confidence 112335689999999
Q ss_pred eeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.|+.|.++|.+.+..+++.+ ++..++.-+ +||.+.-.+ ...+.|.+||.....
T Consensus 170 ~G~~D~iv~~~~s~~L~~~~--~~a~vl~Hp-ggH~VP~~~------~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 170 FGETDTIVPSERSEQLAESF--KDATVLEHP-GGHIVPNKA------KYKEKIADFIQSFLQ 222 (230)
T ss_pred ecccceeecchHHHHHHHhc--CCCeEEecC-CCccCCCch------HHHHHHHHHHHHHHH
Confidence 99999999999999999999 666555555 589998222 366677777766554
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.2e-11 Score=98.56 Aligned_cols=136 Identities=21% Similarity=0.222 Sum_probs=93.4
Q ss_pred ceeEEEcCC---C-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH------------------HHhhCCcEEE
Q 020633 31 GKKYFETPN---G-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI------------------SFATWGYAVF 87 (323)
Q Consensus 31 ~~~~~~~~~---g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~------------------~l~~~g~~v~ 87 (323)
...++...+ + .++|+.+...+ ....|+||+++|++|.++ .+..+.+ .+.+. ..++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccc-cCeE
Confidence 445555532 5 89999998654 356799999999988765 3322210 12223 6789
Q ss_pred EecCC-CCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc---------CCCc
Q 020633 88 AADLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS---------EPNT 155 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~---------p~~~ 155 (323)
.+|.| |+|.|..... ...+.++.++|+.++++..-.+.+ ....+++|+|||+||.++..+|..- ..-+
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~in 205 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYIN 205 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceee
Confidence 99975 8888864322 223567889999999987765543 2346899999999999988777652 1124
Q ss_pred eeEEEEccCcccC
Q 020633 156 WTGLIFSAPLFVI 168 (323)
Q Consensus 156 v~~~vl~~~~~~~ 168 (323)
++++++.++..+.
T Consensus 206 LkGi~IGNg~~dp 218 (462)
T PTZ00472 206 LAGLAVGNGLTDP 218 (462)
T ss_pred eEEEEEeccccCh
Confidence 8999998887653
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-11 Score=95.85 Aligned_cols=230 Identities=21% Similarity=0.221 Sum_probs=118.5
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC---C-CCCCeEEEEechhHHHHHHHhh
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP---Y-RDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
.++..+.++||.|+++|+.|.|.. +. .-......+.+.++..+.-.+ . ...++.++|||.||.-++..+.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~-----y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTP-----YL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCc-----cc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 455667789999999999999872 11 222333444444444442221 1 2458999999999998876664
Q ss_pred h----cCCCc--eeEEEEccCcccCCCCCchh---hHHHHHhhhhhhhhcccccCCcccccccccCChH-----------
Q 020633 150 Q----SEPNT--WTGLIFSAPLFVIPENMKPS---KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE----------- 209 (323)
Q Consensus 150 ~----~p~~~--v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 209 (323)
. -|+.+ +.+.++.+++.++....... .........+..+...+.... ..+........
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~--~~~~~~l~~~g~~~~~~~~~~c 168 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELD--ELLDSYLTPEGRALLDDARTRC 168 (290)
T ss_pred HhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHH--HHHHHHhhHHHHHHHHHHHhhh
Confidence 3 36666 78888877765532211100 000001111111111111000 00000000000
Q ss_pred HHHHHhcC-CCCc--------CCCCchhHHHHHHHHHHHHHh---cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--
Q 020633 210 KLKVIASN-PRRY--------TGKPRVGTMREIARVCQYIQD---NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS-- 275 (323)
Q Consensus 210 ~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 275 (323)
........ .... ...........+.....+..- .-...++|+++.+|..|.++|......+.+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~ 248 (290)
T PF03583_consen 169 LADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAA 248 (290)
T ss_pred HHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHc
Confidence 00000000 0000 000000001112222221111 112347999999999999999999998888875
Q ss_pred C-CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 276 S-ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 276 ~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+ .+++++.+++.+|...... -......||.+++...
T Consensus 249 G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 249 GGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCC
Confidence 3 3577888899999875211 3366789999998654
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.4e-11 Score=85.11 Aligned_cols=234 Identities=10% Similarity=0.017 Sum_probs=129.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC-C--cEEEEecCCCCcCCC---C-----CcccCCChHHHhhcHHHHHHHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW-G--YAVFAADLLGHGRSD---G-----IRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~G~G~s~---~-----~~~~~~~~~~~~~d~~~~l~~l 121 (323)
..++.++++.|.+|... +|..++..|... + ..++.+-.-||-.-+ . ......++++.++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 56899999999999988 899998887654 1 458888777775443 1 1122346677776666666655
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (323)
.-+ +.+++++|||.|+++.+.+... .+...|.+++++-|...--......+........+.....-...
T Consensus 106 ~Pk----~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~y------ 175 (301)
T KOG3975|consen 106 VPK----DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSY------ 175 (301)
T ss_pred CCC----CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeee------
Confidence 444 5699999999999999998874 33334778887766432111111111111110000000000000
Q ss_pred cccccCChHHHHHHhcCCCCcCC-------------------CCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 201 VGKAIKDPEKLKVIASNPRRYTG-------------------KPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
.-........+.++.....+... ....-...++........+...+..+-+.+.+|+.|.+
T Consensus 176 i~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 176 IYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred eeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 00000000011111000000000 00000111122222222334445567789999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
+|.+....+.+.++..+.++-+ +++.|.+.+...+.
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ 291 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQY 291 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHH
Confidence 9999999999999655666666 78999998655554
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.35 E-value=5e-12 Score=94.52 Aligned_cols=165 Identities=19% Similarity=0.204 Sum_probs=83.2
Q ss_pred cceEEEEecCCCCCccccHHH----HHHHHhhCCcEEEEecCCCCc-----CCC------------CCcccCC-------
Q 020633 54 VKATVYMTHGYGSDTGWMFQK----ICISFATWGYAVFAADLLGHG-----RSD------------GIRCYLG------- 105 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G-----~s~------------~~~~~~~------- 105 (323)
+++-||+|||++.+.. .++. +...|.+.++.++.+|-|--- ... .+...+.
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 4789999999999876 5644 455555536888888865221 110 0000000
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc----C---CCceeEEEEccCcccCCCCCchhhHH
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS----E---PNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p---~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
....+.+.+..+.+.+....+ =..|+|+|.||.+|..++... + ...++.+|+++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~------ 151 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY------ 151 (212)
T ss_dssp GG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G------
T ss_pred cccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh------
Confidence 122233344444444444422 357999999999998888642 1 11278899988765321100
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.. .. .-.+|++|+|.|+|++
T Consensus 152 -----------------------~~------------------------------------~~-~~~~i~iPtlHv~G~~ 171 (212)
T PF03959_consen 152 -----------------------QE------------------------------------LY-DEPKISIPTLHVIGEN 171 (212)
T ss_dssp -----------------------TT------------------------------------TT---TT---EEEEEEETT
T ss_pred -----------------------hh------------------------------------hh-ccccCCCCeEEEEeCC
Confidence 00 00 1245799999999999
Q ss_pred CcccCchhHHHHHHHcCCCC-ccEEEecCCCcccc
Q 020633 259 DGVTCPTSSKLLYEKASSAD-KSIKIYDGMYHSLI 292 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 292 (323)
|.+++++.++.+.+.+ .+ .+++..++ ||.+.
T Consensus 172 D~~~~~~~s~~L~~~~--~~~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 172 DPVVPPERSEALAEMF--DPDARVIEHDG-GHHVP 203 (212)
T ss_dssp -SSS-HHHHHHHHHHH--HHHEEEEEESS-SSS--
T ss_pred CCCcchHHHHHHHHhc--cCCcEEEEECC-CCcCc
Confidence 9999999999999888 44 66666674 88887
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.1e-11 Score=83.72 Aligned_cols=182 Identities=16% Similarity=0.155 Sum_probs=117.6
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC-----------------CCcccCCChHHHhhcHHHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-----------------GIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 117 (323)
..+||++||.+.+.. .|..+.+.|.-.....+++.-|-.-.+. .-......+...++-+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 468999999998776 7777777776556677776444221111 0001112344445556666
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
+++.... +++..++.+-|.|+||.+++..+..++.. +.+++...++........+.
T Consensus 82 i~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~~~-l~G~~~~s~~~p~~~~~~~~---------------------- 137 (206)
T KOG2112|consen 82 IDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYPKA-LGGIFALSGFLPRASIGLPG---------------------- 137 (206)
T ss_pred HHHHHHc-CCCccceeEcccCchHHHHHHHHhccccc-cceeeccccccccchhhccC----------------------
Confidence 6655443 33456899999999999999999999776 77777766554311100000
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS-- 275 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 275 (323)
.....+ ..|++..||+.|++||....+...+.+.
T Consensus 138 ------------------------------------------~~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~ 173 (206)
T KOG2112|consen 138 ------------------------------------------WLPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSL 173 (206)
T ss_pred ------------------------------------------CccccC--cchhheecccCCceeehHHHHHHHHHHHHc
Confidence 000001 6799999999999999876665555442
Q ss_pred CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 276 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
...++++.|++.+|... ++ -.+.+..|+.+
T Consensus 174 ~~~~~f~~y~g~~h~~~---~~-----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 174 GVRVTFKPYPGLGHSTS---PQ-----ELDDLKSWIKT 203 (206)
T ss_pred CCceeeeecCCcccccc---HH-----HHHHHHHHHHH
Confidence 12388999999999988 33 35677778776
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.3e-11 Score=90.96 Aligned_cols=131 Identities=15% Similarity=0.051 Sum_probs=90.8
Q ss_pred eEEEcCCCcEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHH--HHHhh-CCcEEEEecCCCC-------cCCCCCc
Q 020633 33 KYFETPNGKLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKIC--ISFAT-WGYAVFAADLLGH-------GRSDGIR 101 (323)
Q Consensus 33 ~~~~~~~g~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~--~~l~~-~g~~v~~~d~~G~-------G~s~~~~ 101 (323)
..+.....+..|+.|.|..- ++.|.||++||.+++.. .+.... +.|++ .||-|+.+|--.. +.+..+.
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~ 116 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPA 116 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcc
Confidence 33443333889999998763 34589999999987754 333222 33443 4999999853221 1121111
Q ss_pred ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..... .+-+..+.+++..+..++.++..+|++.|.|-||.++..++..+|+. +.++..+++..
T Consensus 117 ~~~~g-~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~-faa~A~VAg~~ 179 (312)
T COG3509 117 DRRRG-VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI-FAAIAPVAGLL 179 (312)
T ss_pred cccCC-ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc-ccceeeeeccc
Confidence 10112 23367788899999999999999999999999999999999999998 88888777654
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.5e-11 Score=88.84 Aligned_cols=111 Identities=13% Similarity=0.063 Sum_probs=73.3
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHh--------hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFA--------TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE 125 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~--------~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 125 (323)
.+.+||||||.+++.. .++.+...+. ...++++++|+......-. . ..+.+..+-+.+.++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g--~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--G--RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc--c--ccHHHHHHHHHHHHHHHHHhh
Confidence 3679999999988766 6666665552 1247899999876432211 1 134444555555555554433
Q ss_pred ---CCCCCCeEEEEechhHHHHHHHhhhcC---CCceeEEEEccCcccCCC
Q 020633 126 ---PYRDLPGFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 126 ---~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~~~~~~ 170 (323)
.....+++++||||||.+|..++.... +. |+.+|.++++.....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~-v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDS-VKTIITLGTPHRGSP 127 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhcccccccc-EEEEEEEcCCCCCcc
Confidence 123679999999999999988776533 34 999999987765443
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-10 Score=109.11 Aligned_cols=100 Identities=12% Similarity=0.097 Sum_probs=82.7
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++++++||++++.. .|..+.+.|... +.|++++.+|++.+.. ...+++++++++.+.++.+.. ..++++
T Consensus 1068 ~~~l~~lh~~~g~~~-~~~~l~~~l~~~-~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~-----~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-QFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP-----HGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchH-HHHHHHHhcCCC-CcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC-----CCCEEE
Confidence 478999999998876 899999999654 9999999999986532 234899999999988887643 337999
Q ss_pred EEechhHHHHHHHhhh---cCCCceeEEEEccCc
Q 020633 135 FGESMGGAATMLMYFQ---SEPNTWTGLIFSAPL 165 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~ 165 (323)
+|||+||.+|..+|.+ .+.+ +..++++++.
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~-v~~l~l~~~~ 1170 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEE-VAFLGLLDTW 1170 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCc-eeEEEEecCC
Confidence 9999999999999986 4666 9999988764
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.1e-10 Score=83.77 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=82.8
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
|+++++|+.+|... .|..++..|... ..|+.++.||.+.-.. ...+++++++...+.|..++- .++++|+
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~~---~~~~l~~~a~~yv~~Ir~~QP-----~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGEQ---PFASLDDMAAAYVAAIRRVQP-----EGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccC-ceeeccccCccccccc---ccCCHHHHHHHHHHHHHHhCC-----CCCEEEE
Confidence 57999999998876 899999999887 9999999999985322 223788888888887777765 4489999
Q ss_pred EechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
|||+||.+|..+|.+. ..+.|..++++++...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999998872 2223999999998766
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-10 Score=86.91 Aligned_cols=111 Identities=16% Similarity=0.244 Sum_probs=74.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC------CC-ccc-C------C-------------
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD------GI-RCY-L------G------------- 105 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~------~~-~~~-~------~------------- 105 (323)
++.|+|||-||+|++.. .|..++-.|+.+||.|.+++.|.+..+. .. .+. . .
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 56799999999999877 8999999999999999999998764432 00 000 0 0
Q ss_pred -ChHHHhhcHHHHH---HHHHhcC------------------CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 106 -DMEKVAASSLSFF---KHVRDSE------------------PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 106 -~~~~~~~d~~~~l---~~l~~~~------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
.+..-+.++..++ +.+..-. .++-.++.|+|||+||..++.....+.+ +++.|+++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~--FrcaI~lD 272 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD--FRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc--eeeeeeee
Confidence 0111122222222 2222110 1234578999999999999887777665 88988888
Q ss_pred Ccc
Q 020633 164 PLF 166 (323)
Q Consensus 164 ~~~ 166 (323)
.+.
T Consensus 273 ~WM 275 (399)
T KOG3847|consen 273 AWM 275 (399)
T ss_pred eee
Confidence 764
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.8e-09 Score=76.26 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=79.5
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...++.+.+.+..+..... ..++.|+|.|+||+.|..++.++.- ..|+++|...+.... ...+..
T Consensus 40 ~~a~~~l~~~i~~~~~~~~--~~~~~liGSSLGGyyA~~La~~~g~----~aVLiNPAv~P~~~L---------~~~ig~ 104 (180)
T PRK04940 40 KHDMQHLLKEVDKMLQLSD--DERPLICGVGLGGYWAERIGFLCGI----RQVIFNPNLFPEENM---------EGKIDR 104 (180)
T ss_pred HHHHHHHHHHHHHhhhccC--CCCcEEEEeChHHHHHHHHHHHHCC----CEEEECCCCChHHHH---------HHHhCC
Confidence 3334445555543322110 1378999999999999999999764 367889876542110 000000
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC-CCCcCEEEEeeCCCcccCchh
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS-KVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~ 266 (323)
.. . +. .+... ..+.++ +..-..+++..+.|++.+...
T Consensus 105 ---------~~--------------------~-y~---------~~~~~---h~~eL~~~~p~r~~vllq~gDEvLDyr~ 142 (180)
T PRK04940 105 ---------PE--------------------E-YA---------DIATK---CVTNFREKNRDRCLVILSRNDEVLDSQR 142 (180)
T ss_pred ---------Cc--------------------c-hh---------hhhHH---HHHHhhhcCcccEEEEEeCCCcccCHHH
Confidence 00 0 00 00000 011111 112246899999999998876
Q ss_pred HHHHHHHcCCCCc-cEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 267 SKLLYEKASSADK-SIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 267 ~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+...+. +. +..+.+|++|.+. ..++....|.+|++
T Consensus 143 a~~~y~-----~~y~~~v~~GGdH~f~------~fe~~l~~I~~F~~ 178 (180)
T PRK04940 143 TAEELH-----PYYEIVWDEEQTHKFK------NISPHLQRIKAFKT 178 (180)
T ss_pred HHHHhc-----cCceEEEECCCCCCCC------CHHHHHHHHHHHHh
Confidence 665543 34 6888899888876 24558888999984
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-10 Score=92.08 Aligned_cols=187 Identities=17% Similarity=0.168 Sum_probs=119.8
Q ss_pred ceEEEEecCCC-C--Ccc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH--HHhcCCC
Q 020633 55 KATVYMTHGYG-S--DTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH--VRDSEPY 127 (323)
Q Consensus 55 ~~~vv~~HG~~-~--~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ 127 (323)
.|.+|++||.+ . .++ |.|........+. ..|.++|++.--.. .++...++.+..+.++ +......
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 58899999987 1 122 3333333333332 56677787732111 2555556666666552 2222223
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
...+|+|+|.|||+.++.+......+-.|+++|+++-......... ..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------gi-- 295 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------GI-- 295 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------CC--
Confidence 3779999999999988888777665544999999885443221100 00
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCC
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
..+.+-.++.|+|+|.|.+|..++++..+.+.+++.. ..+++++.++
T Consensus 296 --------------------------------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI~~a 342 (784)
T KOG3253|consen 296 --------------------------------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVIGGA 342 (784)
T ss_pred --------------------------------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEecCC
Confidence 1244556789999999999999999999999999863 5789999999
Q ss_pred CcccccCCC-----chhHHHHHHHHHHHHHHH
Q 020633 288 YHSLIQGEP-----DENANLVLKDMREWIDER 314 (323)
Q Consensus 288 gH~~~~~~~-----~~~~~~~~~~i~~fl~~~ 314 (323)
+|.+-.-.. ......+...+.+||.+.
T Consensus 343 dhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 343 DHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred CccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 999875431 122334444455554443
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.9e-11 Score=90.34 Aligned_cols=129 Identities=14% Similarity=0.093 Sum_probs=87.0
Q ss_pred cceeEEEcCCC-cEEEEEec---CCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 30 NGKKYFETPNG-KLFTQSFL---PLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~---~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
..+..+.+.|| +|-..... ...++....|||+-|..+-.+ -.++..=++.||.|+.++.||++.|.+.+....
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE---vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n 290 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE---VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN 290 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE---eeeecChHHhCceeeccCCCCccccCCCCCccc
Confidence 35567777787 55433222 222245678999998765432 122222335689999999999999998765543
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+....-.-+.-.|+.++-. .+.|++.|+|.||.-+..+|..+|+ |+++|+.+++-+
T Consensus 291 ~~nA~DaVvQfAI~~Lgf~----~edIilygWSIGGF~~~waAs~YPd--VkavvLDAtFDD 346 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVLGFR----QEDIILYGWSIGGFPVAWAASNYPD--VKAVVLDATFDD 346 (517)
T ss_pred chHHHHHHHHHHHHHcCCC----ccceEEEEeecCCchHHHHhhcCCC--ceEEEeecchhh
Confidence 3333222233344444433 6689999999999999999999999 999999987654
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.7e-09 Score=81.56 Aligned_cols=208 Identities=13% Similarity=0.246 Sum_probs=128.4
Q ss_pred ceeEEEcCCC-cEEEEEecCC-CCCcceEEEEecCCCCCccc--cHHHHHHHHhhCCcEEEEecCCCC--cCCC------
Q 020633 31 GKKYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDTGW--MFQKICISFATWGYAVFAADLLGH--GRSD------ 98 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~--G~s~------ 98 (323)
+...+.. ++ ++- ..|.+. .++.+..||++||.+.+..| ....+...|.+.||.++++.+|.- ....
T Consensus 63 e~~~L~~-~~~~fl-aL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 63 EVQWLQA-GEERFL-ALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred hcEEeec-CCEEEE-EEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 3344444 44 443 334443 34678899999999987642 456677889999999999998871 1110
Q ss_pred ------C--C--cc--------------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC
Q 020633 99 ------G--I--RC--------------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN 154 (323)
Q Consensus 99 ------~--~--~~--------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 154 (323)
+ . .. .....+.+..-+.+++..+.... ..+++|+||+.|+..++.+....+..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHhcCCCc
Confidence 0 0 00 00012334455666666666653 33499999999999999999997765
Q ss_pred ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH
Q 020633 155 TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 155 ~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
.++++|++++.......
T Consensus 218 ~~daLV~I~a~~p~~~~--------------------------------------------------------------- 234 (310)
T PF12048_consen 218 MPDALVLINAYWPQPDR--------------------------------------------------------------- 234 (310)
T ss_pred ccCeEEEEeCCCCcchh---------------------------------------------------------------
Confidence 58999999986432210
Q ss_pred HHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH---HHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL---LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
...+.+.+.++++|||=|++.+...+ ...+.. ..++....+.+-+.+.+..|... ...+.+.+.|..||
T Consensus 235 --n~~l~~~la~l~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-----~~~~~l~~rIrGWL 306 (310)
T PF12048_consen 235 --NPALAEQLAQLKIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS-----GWQEQLLRRIRGWL 306 (310)
T ss_pred --hhhHHHHhhccCCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChh-----hHHHHHHHHHHHHH
Confidence 00134566778999999998873322 222211 12222223445556666555443 33344999999999
Q ss_pred HHH
Q 020633 312 DER 314 (323)
Q Consensus 312 ~~~ 314 (323)
+++
T Consensus 307 ~~~ 309 (310)
T PF12048_consen 307 KRH 309 (310)
T ss_pred Hhh
Confidence 875
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.8e-08 Score=79.37 Aligned_cols=122 Identities=11% Similarity=0.066 Sum_probs=75.1
Q ss_pred cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCc----EEEEecCCCCcCCCCCcccCCChHHHhhcH
Q 020633 41 KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGY----AVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 41 ~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
+..+++|.|.+ .++.|+|+++||............++.|...|. .++.+|..+... ..... ..-..+.+.+
T Consensus 193 ~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~--R~~el-~~~~~f~~~l 269 (411)
T PRK10439 193 SRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTH--RSQEL-PCNADFWLAV 269 (411)
T ss_pred ceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCccc--ccccC-CchHHHHHHH
Confidence 67778888864 245799999999653222123344556655553 467777532111 11111 1112222222
Q ss_pred -HHHHHHHHhcCCC--CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 115 -LSFFKHVRDSEPY--RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 115 -~~~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+++-++...+.+ +..+.+|+|+||||..|+.++.++|+. +.+++.+++..
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~-Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPER-FGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCccc-ccEEEEeccce
Confidence 3334444444332 356789999999999999999999999 99999998753
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.6e-11 Score=87.02 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=57.4
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcE---EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYA---VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.||||+||.+++....|..+++.|.++||. ++++++-....+...... ....+.+..+.++|+.+...-+ . +|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~TG--a-kV 77 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYTG--A-KV 77 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHHT-----E
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhhC--C-EE
Confidence 589999999986555899999999999999 799998543332211111 0123345778888888776543 5 99
Q ss_pred EEEEechhHHHHHHHhhh
Q 020633 133 FLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~ 150 (323)
-||||||||.++..+...
T Consensus 78 DIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEETCHHHHHHHHHHH
T ss_pred EEEEcCCcCHHHHHHHHH
Confidence 999999999999887754
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.3e-09 Score=89.29 Aligned_cols=250 Identities=11% Similarity=0.050 Sum_probs=155.5
Q ss_pred cccccCcccceeEEEcCCC-cEEEEEecCC-CCCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 22 YYTSQGVRNGKKYFETPNG-KLFTQSFLPL-DQKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~-~~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
.|+..++..++...++.|| +|+|.+.+.. ..++.|++|+--|+..-+ ...|......+.++|...+..+.||=|+=.
T Consensus 386 ~FDa~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 386 QFDADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred CcCccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC
Confidence 4556678888999999999 9999998621 123567777655543221 224555557777899999999999987764
Q ss_pred CC---cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 99 GI---RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 99 ~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.. ...-.+-+...+|+.++.+.|..+.-..++++.+.|-|-||.+.-....++|+. +.++|+-.|..++-.....
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPel-fgA~v~evPllDMlRYh~l- 543 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPEL-FGAAVCEVPLLDMLRYHLL- 543 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhh-hCceeeccchhhhhhhccc-
Confidence 21 111124456678899999988877554566899999999999998888899998 9888888887664321100
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccc--cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC--CCcCE
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKA--IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK--VTVPF 251 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~ 251 (323)
.....+...+ -.++.....+..... ...++. .=.|+
T Consensus 544 -------------------~aG~sW~~EYG~Pd~P~d~~~l~~YSP---------------------y~nl~~g~kYP~~ 583 (648)
T COG1505 544 -------------------TAGSSWIAEYGNPDDPEDRAFLLAYSP---------------------YHNLKPGQKYPPT 583 (648)
T ss_pred -------------------ccchhhHhhcCCCCCHHHHHHHHhcCc---------------------hhcCCccccCCCe
Confidence 0000111000 011111111211110 111221 12479
Q ss_pred EEEeeCCCcccCchhHHHHHHHcCCCCccEEEe--cCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIY--DGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
||-.+..|.-|.+..++.++.++...+.....+ -++||..--. ......-...+..||.+.+
T Consensus 584 LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~--~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 584 LITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAP--TAEIARELADLLAFLLRTL 647 (648)
T ss_pred EEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCC--hHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988885333444444 3689988721 1111223445667777654
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-08 Score=73.73 Aligned_cols=110 Identities=13% Similarity=0.039 Sum_probs=79.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCC-----cEEEEecCCCC----cCCCCC----------cccCCChHHHhhcHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWG-----YAVFAADLLGH----GRSDGI----------RCYLGDMEKVAASSL 115 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~~----------~~~~~~~~~~~~d~~ 115 (323)
.-+.|||||.+++.+ ....++..|...+ --++.+|--|- |.-+.. .....+..++...+.
T Consensus 45 ~iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 347899999999988 7888888887763 23566666552 111111 111235677789999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC----ceeEEEEccCccc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFV 167 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~vl~~~~~~ 167 (323)
.++.+|..++. -.++.++||||||.-...++..+... .++.+|.+++...
T Consensus 124 ~~msyL~~~Y~--i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYN--IPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcC--CceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999999987 56899999999999999998875321 1888888876654
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.1e-09 Score=81.00 Aligned_cols=117 Identities=18% Similarity=0.176 Sum_probs=83.9
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..++.+.. |+ .|-.....-++..+...||+.-|.++..+..+ ..+.+.....|-.|+.+++||.|.|.+..
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~- 189 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP- 189 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-
Confidence 34444544 66 76655555444467889999999886544211 12233333347899999999999998765
Q ss_pred cCCChHHHhhcHHHHHHHHHhcC-CCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSE-PYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+.++++.|..+.++++..+. ++...++++.|||+||.++..++.++
T Consensus 190 ---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 ---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 56999999999999998643 33467899999999999998866654
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.07 E-value=2e-10 Score=90.99 Aligned_cols=115 Identities=14% Similarity=0.095 Sum_probs=70.2
Q ss_pred CcceEEEEecCCCCCc-cc-cHHHHHHHH-hh--CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC
Q 020633 53 KVKATVYMTHGYGSDT-GW-MFQKICISF-AT--WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~-~~-~~~~~~~~l-~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 127 (323)
..+|++|++|||.++. .. ....+.+.+ .. .++.||++|+...-... -.............+..+|+.|....+.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5689999999998776 22 334455544 44 47999999996332211 0000112344556677777777754444
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCC-CceeEEEEccCcccC
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVI 168 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~~ 168 (323)
+.++++|||||+||++|-.++..... .+|..|+.++|+...
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 57799999999999999988887666 239999999987654
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.8e-10 Score=90.10 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=74.4
Q ss_pred ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 70 WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+.|..+++.|.+.||.+ ..|++|+|.+.... ...++..+++.++++.+....+ ..+++|+||||||.++..++.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHH
Confidence 48999999999999865 88999999986542 2456777888888888776654 568999999999999999998
Q ss_pred hcCCC---ceeEEEEccCcccC
Q 020633 150 QSEPN---TWTGLIFSAPLFVI 168 (323)
Q Consensus 150 ~~p~~---~v~~~vl~~~~~~~ 168 (323)
.+|+. .|+++|+++++..-
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCC
Confidence 87753 27888988876543
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.7e-09 Score=79.88 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=73.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCc--EEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGY--AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
+.+.++||+||+..+........++....-++ .++.+.+|+.|.-..-.....+...-...+..+|+.+....+ ..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~--~~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPG--IK 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccC--Cc
Confidence 45789999999987643122222222222223 799999998876432111112344556778888888877643 66
Q ss_pred CeEEEEechhHHHHHHHhhh----cCC----CceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQ----SEP----NTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~----~p~----~~v~~~vl~~~~~~ 167 (323)
+|+|++||||+.+.+.+... .+. ..+..+++.+|-.+
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999999998887654 111 13788899887654
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.3e-08 Score=79.52 Aligned_cols=88 Identities=16% Similarity=0.184 Sum_probs=68.2
Q ss_pred HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC
Q 020633 74 KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 74 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
.+...| +.|+.|+.+.+. ..+....++++.......+++.+....+..+ +.+|+|.|.||..++.+|+.+|+
T Consensus 92 evG~AL-~~GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 92 EVGVAL-RAGHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHHH-HcCCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcC
Confidence 344455 458999888765 2233334888888888899999888776333 89999999999999999999999
Q ss_pred CceeEEEEccCcccCCC
Q 020633 154 NTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 154 ~~v~~~vl~~~~~~~~~ 170 (323)
. +.-+|+.+++.+...
T Consensus 164 ~-~gplvlaGaPlsywa 179 (581)
T PF11339_consen 164 L-VGPLVLAGAPLSYWA 179 (581)
T ss_pred c-cCceeecCCCccccc
Confidence 8 888888877766655
|
Their function is unknown. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.3e-07 Score=66.70 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=78.4
Q ss_pred ceEEEEecCCCCCc--cccHHHHHHHHhhCCcEEEEecCCC----CcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 55 KATVYMTHGYGSDT--GWMFQKICISFATWGYAVFAADLLG----HGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 55 ~~~vv~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+-.|||+.|++..- -.+-..+...|-+.+|..+-+-++. +|.+ ++.+-++|+..+++++.....
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~f-- 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGF-- 105 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCc--
Confidence 46899999998542 2255778889989999999888763 3333 667778999999998876543
Q ss_pred CCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCC
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~ 169 (323)
...|+++|||-|+.=.+.|... .-++.+++.|+.+|..+..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 4489999999999988888733 2223388888888876643
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.2e-08 Score=79.13 Aligned_cols=127 Identities=12% Similarity=0.016 Sum_probs=75.1
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCC----cEEEEecCCCCcCCCC---------C-cc
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWG----YAVFAADLLGHGRSDG---------I-RC 102 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~---------~-~~ 102 (323)
...+.+|.|.+ .++.|+|+++||..... .+........+...| ..+++++..+.+.... . ..
T Consensus 7 ~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (251)
T PF00756_consen 7 DRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRAD 86 (251)
T ss_dssp EEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCT
T ss_pred eEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccc
Confidence 56677777765 35679999999962211 111222333333332 4566666655541110 0 00
Q ss_pred cCCChHHHhhcH-HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 103 YLGDMEKVAASS-LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 103 ~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
.......+.+.+ .+++..+...+.....+..|+|+||||..|+.++.++|+. +.++++++|....
T Consensus 87 ~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~-F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 87 DSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL-FGAVIAFSGALDP 152 (251)
T ss_dssp STTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT-ESEEEEESEESET
T ss_pred cCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc-cccccccCccccc
Confidence 011122222222 2444555555443344489999999999999999999999 9999999987654
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-07 Score=70.94 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=66.1
Q ss_pred EecCCC--CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEe
Q 020633 60 MTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGE 137 (323)
Q Consensus 60 ~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 137 (323)
++|+.+ ++.. .|..+...|... +.|+++|.+|++.+.... .+++.+++.+...+.... + ..+++++||
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~---~--~~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGR-RDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA---G--GRPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCC-ccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc---C--CCCeEEEEE
Confidence 445543 3334 788888888764 999999999998664332 256666655544444322 1 447999999
Q ss_pred chhHHHHHHHhhh---cCCCceeEEEEccCcc
Q 020633 138 SMGGAATMLMYFQ---SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 138 S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~ 166 (323)
|+||.++...+.. .+.. +.+++++++..
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~-~~~l~~~~~~~ 102 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIP-PAAVVLLDTYP 102 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCC-CcEEEEEccCC
Confidence 9999999888876 3445 88888877543
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.6e-08 Score=84.66 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=89.3
Q ss_pred ceeEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH-------------------HHhhCCcEEE
Q 020633 31 GKKYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI-------------------SFATWGYAVF 87 (323)
Q Consensus 31 ~~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~-------------------~l~~~g~~v~ 87 (323)
..-++... .+ .++|+.+...+ .+.+|+||++.|++|.++ .+-.+.+ .+.+. ..++
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l 89 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLL 89 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccc-cceE
Confidence 34455555 55 99999998765 356899999999998776 5533321 12222 6899
Q ss_pred EecCC-CCcCCCCCcc--cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----CCC
Q 020633 88 AADLL-GHGRSDGIRC--YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----EPN 154 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~~ 154 (323)
.+|.| |.|.|..... ...+.++.++|+..+|+..-.+.+ ....+++|.|.|+||..+-.+|.. . +..
T Consensus 90 ~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~i 169 (415)
T PF00450_consen 90 FIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKI 169 (415)
T ss_dssp EE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTS
T ss_pred EEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccc
Confidence 99966 8999974433 344778889999999887766654 334589999999999887666654 2 134
Q ss_pred ceeEEEEccCcccC
Q 020633 155 TWTGLIFSAPLFVI 168 (323)
Q Consensus 155 ~v~~~vl~~~~~~~ 168 (323)
+++++++.++..+.
T Consensus 170 nLkGi~IGng~~dp 183 (415)
T PF00450_consen 170 NLKGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEEEESE-SBH
T ss_pred ccccceecCccccc
Confidence 58999999987654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-07 Score=67.57 Aligned_cols=128 Identities=20% Similarity=0.228 Sum_probs=78.6
Q ss_pred cEEEEEecCCCC---CcceEEEEecCCCCCccccHH--HHHHHHhhCCcEEEEecCCCCcCCC-CCcccC----------
Q 020633 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQ--KICISFATWGYAVFAADLLGHGRSD-GIRCYL---------- 104 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~---------- 104 (323)
.+.+-+|.|+.. ++-|++.++-|+..+...... .+-+..+++|+.|+.+|---.|..- +..+..
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYv 106 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYV 106 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEE
Confidence 566677777642 346899999999877541211 2334445679999999964333221 000000
Q ss_pred -CChHHHh-------hcHHHHHHHHH-hcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 105 -GDMEKVA-------ASSLSFFKHVR-DSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 105 -~~~~~~~-------~d~~~~l~~l~-~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.+.+-|. --+.++.+.+. ...+++..++.+.||||||.-|+..+.+.|.+ .+++-..+|.....
T Consensus 107 nAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~k-ykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 107 NATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSK-YKSVSAFAPICNPI 179 (283)
T ss_pred ecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCccc-ccceeccccccCcc
Confidence 0111111 11223333333 23345677899999999999999999999998 88888888776543
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1e-07 Score=79.07 Aligned_cols=146 Identities=13% Similarity=0.073 Sum_probs=102.3
Q ss_pred cccccCcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 22 YYTSQGVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
.++......+++.+.+.|| .+...+..... .+++|.+|..+|.-+-+ ...|..-...|.++|+.....|.||=|.
T Consensus 433 g~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe 512 (712)
T KOG2237|consen 433 GFDASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGE 512 (712)
T ss_pred cccccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcc
Confidence 3444456778899999999 76655544322 25788888888765322 2234433344667899999999999776
Q ss_pred CCC---CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 97 SDG---IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 97 s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
-.. ..+....-.+..+|+.+..++|....-..+.+..+.|.|.||.++..++..+|+. +.++|+-.|+.++
T Consensus 513 ~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdL-F~avia~VpfmDv 586 (712)
T KOG2237|consen 513 YGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDL-FGAVIAKVPFMDV 586 (712)
T ss_pred cccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchH-hhhhhhcCcceeh
Confidence 542 1222222344557777777887776555577999999999999999999999999 9999998887664
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.8e-07 Score=76.32 Aligned_cols=141 Identities=13% Similarity=0.085 Sum_probs=95.5
Q ss_pred cccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCC--
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-- 100 (323)
...+++..+..|| +|...+.-..+ .++.|++|+.-|.-+.+ ...|....-.|.++|+.....-.||=|.-...
T Consensus 417 Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WY 496 (682)
T COG1770 417 YVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWY 496 (682)
T ss_pred eEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHH
Confidence 3345566666888 77666544322 25678888877764432 22444445567789998877888887665421
Q ss_pred -cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 101 -RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 101 -~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.+....-..-..|+.+..++|..+.-.+...++++|-|.||++.-..+...|+. ++++|+-.|+.+.-
T Consensus 497 e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~l-f~~iiA~VPFVDvl 565 (682)
T COG1770 497 EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDL-FAGIIAQVPFVDVL 565 (682)
T ss_pred HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhh-hhheeecCCccchh
Confidence 111112223345666677777666555567899999999999999999999999 99999999988754
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.9e-07 Score=62.47 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=58.7
Q ss_pred EEEecCCCCCccccHHH-H-HHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 58 VYMTHGYGSDTGWMFQK-I-CISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 58 vv~~HG~~~~~~~~~~~-~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
||++||+.++.. .... + .+.+.. |.|-.+.+..... .+....++.+..++...+.+ ...++
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~--------~~~~i~y~~p~l~--h~p~~a~~ele~~i~~~~~~------~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDE--------DVRDIEYSTPHLP--HDPQQALKELEKAVQELGDE------SPLIV 64 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhc--------cccceeeecCCCC--CCHHHHHHHHHHHHHHcCCC------CceEE
Confidence 899999988655 3332 2 222322 3333333433222 26788888888888887644 47999
Q ss_pred EechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 136 GESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
|.|+||+.|..++.++. +++ |+++|...
T Consensus 65 GssLGGY~At~l~~~~G---ira-v~~NPav~ 92 (191)
T COG3150 65 GSSLGGYYATWLGFLCG---IRA-VVFNPAVR 92 (191)
T ss_pred eecchHHHHHHHHHHhC---Chh-hhcCCCcC
Confidence 99999999999998875 333 45666654
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.1e-07 Score=72.50 Aligned_cols=70 Identities=24% Similarity=0.352 Sum_probs=54.6
Q ss_pred CCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 245 SKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 245 ~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.++. +|+|+++|.+|..+|......++........+...+++++|...... ....++..+.+.+|+.+.+
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHhc
Confidence 3444 79999999999999999999998887543467888888999888422 2334568889999998764
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.2e-06 Score=69.67 Aligned_cols=109 Identities=15% Similarity=0.112 Sum_probs=71.5
Q ss_pred CcceEEEEecCCCCCccc---c---HHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC
Q 020633 53 KVKATVYMTHGYGSDTGW---M---FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~---~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
++.|+||++||+|-.-.. . ...+...| + ...++++|+.-...- .. ...+.....++.+..+++....+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~--~~--~~~yPtQL~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSD--EH--GHKYPTQLRQLVATYDYLVESEG 193 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccc--cC--CCcCchHHHHHHHHHHHHHhccC
Confidence 457999999999843221 1 11222333 3 368999998744300 11 12455566777788888874443
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhc----CCCceeEEEEccCcccCC
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~vl~~~~~~~~ 169 (323)
...|+|+|-|.||.+++.+.... +..-.+++|+++|+..+.
T Consensus 194 --~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 --NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred --CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 56899999999999998876541 111268999999998865
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.6e-08 Score=84.30 Aligned_cols=120 Identities=18% Similarity=0.130 Sum_probs=75.6
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCC---ccccHHHHHHHHhhC--CcEEEEecCC-C---CcCCCCCcccCCChH
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSD---TGWMFQKICISFATW--GYAVFAADLL-G---HGRSDGIRCYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~---~~~~~~~~~~~l~~~--g~~v~~~d~~-G---~G~s~~~~~~~~~~~ 108 (323)
-|+..+|.|.. .++.|+||++||++.. .. .+ ....|+.. |+.|+++++| | +..+... . ..-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~--~~~n 151 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-E--LPGN 151 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecccccccccccCCCC-C--CCcc
Confidence 56667777754 2567999999997632 22 11 22334433 3999999999 3 2222111 1 1112
Q ss_pred HHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 109 KVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
.-..|...++++++.. .+.++.+|.|+|+|.||..+..++.. .+.. ++++|+.++...
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~l-f~~~i~~sg~~~ 214 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGL-FHRAISQSGSAL 214 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHH-HHHHhhhcCCcc
Confidence 2245666666666543 34567899999999999998887765 2334 888888776543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.9e-06 Score=70.24 Aligned_cols=134 Identities=13% Similarity=0.137 Sum_probs=84.0
Q ss_pred eEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH----------------H-------HhhCCcE
Q 020633 33 KYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI----------------S-------FATWGYA 85 (323)
Q Consensus 33 ~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~----------------~-------l~~~g~~ 85 (323)
.++... .+ .++|+.+.... ....|+|+++-|++|.++ .+..+.+ . +.+. ..
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-an 119 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-AN 119 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-Cc
Confidence 344443 35 78888877654 245799999999987765 3322211 1 1122 57
Q ss_pred EEEecCC-CCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----CC
Q 020633 86 VFAADLL-GHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----EP 153 (323)
Q Consensus 86 v~~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~ 153 (323)
++.+|.| |.|.|-.... ...+-++.++|+..+++..-...+ ....+++|.|.|+||..+-.+|.. . +.
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 8999955 8888853321 112333455777777776554443 234589999999999876666543 1 12
Q ss_pred CceeEEEEccCcccC
Q 020633 154 NTWTGLIFSAPLFVI 168 (323)
Q Consensus 154 ~~v~~~vl~~~~~~~ 168 (323)
-+++++++.++..+.
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 248899999887653
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-05 Score=65.25 Aligned_cols=139 Identities=16% Similarity=0.137 Sum_probs=88.6
Q ss_pred ccceeEEEcC--CC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHh----h-C-------------CcEE
Q 020633 29 RNGKKYFETP--NG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFA----T-W-------------GYAV 86 (323)
Q Consensus 29 ~~~~~~~~~~--~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~----~-~-------------g~~v 86 (323)
+....++... .+ .|+|+.+..... ..+|.||.+-|++|.++ .. .+..++. + . --.+
T Consensus 43 ~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNi 120 (454)
T KOG1282|consen 43 KQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANI 120 (454)
T ss_pred ccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcceeCCccccccccE
Confidence 3344556555 56 999999887653 55899999999998765 22 2222221 0 1 1368
Q ss_pred EEecCC-CCcCCCCCcc--cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----CC
Q 020633 87 FAADLL-GHGRSDGIRC--YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----EP 153 (323)
Q Consensus 87 ~~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~ 153 (323)
+.+|.| |.|.|-.... ...+-+..++|+..++...-.+.+ ....++.|.|.|++|...-.+|.. + |.
T Consensus 121 LfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~ 200 (454)
T KOG1282|consen 121 LFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPN 200 (454)
T ss_pred EEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCc
Confidence 888988 7777753222 112445556777666654433433 446689999999999776666654 2 22
Q ss_pred CceeEEEEccCcccCC
Q 020633 154 NTWTGLIFSAPLFVIP 169 (323)
Q Consensus 154 ~~v~~~vl~~~~~~~~ 169 (323)
-+++|+++-+|..+..
T Consensus 201 iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 201 INLKGYAIGNGLTDPE 216 (454)
T ss_pred ccceEEEecCcccCcc
Confidence 3489999988876543
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.8e-06 Score=67.44 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=82.8
Q ss_pred ceeEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHH---H-------------HH-------hhCC
Q 020633 31 GKKYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKIC---I-------------SF-------ATWG 83 (323)
Q Consensus 31 ~~~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~---~-------------~l-------~~~g 83 (323)
...++... .+ .++|+.+...+ ....|+||++-|++|.++ ....+. . .| .+.
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS-~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~- 115 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSC-LGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM- 115 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHH-HHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-
Confidence 34455553 35 78888877654 246799999999987665 221111 1 11 122
Q ss_pred cEEEEecCC-CCcCCCCCcccCC-ChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----
Q 020633 84 YAVFAADLL-GHGRSDGIRCYLG-DMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S----- 151 (323)
Q Consensus 84 ~~v~~~d~~-G~G~s~~~~~~~~-~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~----- 151 (323)
..++.+|.| |.|.|........ +-.+.++++..+++..-...+ ....+++|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 578999955 8898864322111 112334666666665443333 235689999999999876666553 1
Q ss_pred CCCceeEEEEccCcccC
Q 020633 152 EPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 152 p~~~v~~~vl~~~~~~~ 168 (323)
+.-+++|+++.+|....
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 22248999999886543
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-05 Score=64.71 Aligned_cols=133 Identities=17% Similarity=0.188 Sum_probs=81.8
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccc-cHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcc-------
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW-MFQKICISFATW-GYAVFAADLLGHGRSDGIRC------- 102 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------- 102 (323)
+.+-.... +|.|+..-+.....+..|+++.|+|++... .+..+.+.+++. +..|+.+++-|+|..+....
T Consensus 12 vELgikR~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~ 91 (403)
T PF11144_consen 12 VELGIKRESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDI 91 (403)
T ss_pred eeecccccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHH
Confidence 33444445 788888666554678899999999988652 456677778776 33455566666654321000
Q ss_pred -----------------cCC---ChHHH-------------------------------------------hhcHHHHHH
Q 020633 103 -----------------YLG---DMEKV-------------------------------------------AASSLSFFK 119 (323)
Q Consensus 103 -----------------~~~---~~~~~-------------------------------------------~~d~~~~l~ 119 (323)
... ..... +-|+..++.
T Consensus 92 D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~ 171 (403)
T PF11144_consen 92 DKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALL 171 (403)
T ss_pred HHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHH
Confidence 000 11111 223333344
Q ss_pred HHHhcCCCCC--CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 120 HVRDSEPYRD--LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 120 ~l~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
++....+... -|++++|+|.||++|...|.-.|-. +++++=-+++.
T Consensus 172 ~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~-~~~~iDns~~~ 219 (403)
T PF11144_consen 172 DLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL-FDGVIDNSSYA 219 (403)
T ss_pred HHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc-eeEEEecCccc
Confidence 4433333222 4999999999999999999888987 88887666544
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=71.51 Aligned_cols=94 Identities=11% Similarity=0.019 Sum_probs=52.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
++.-.|||+||+.++.. .|..+...+... .+.-..+...++.... ......++..++.+..-|............
T Consensus 2 ~~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccc
Confidence 44679999999999876 777776666551 1221122222221111 111124555555544333333322221134
Q ss_pred CeEEEEechhHHHHHHHhh
Q 020633 131 PGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~ 149 (323)
++.++||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999866554
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.7e-06 Score=65.40 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=66.6
Q ss_pred ceEEEEecCCCCC--ccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSD--TGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~--~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
..+||+.||+|.+ .. .+..+.+.+.+. |+-+..+. .|-+. .......+.+.++.+.+.+...... ..-
T Consensus 26 ~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L----~~G 96 (306)
T PLN02606 26 SVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL----SEG 96 (306)
T ss_pred CCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh----cCc
Confidence 4689999999943 33 566777777422 66555554 23221 1122234555555555555443322 225
Q ss_pred eEEEEechhHHHHHHHhhhcCC-CceeEEEEccCccc
Q 020633 132 GFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFV 167 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~ 167 (323)
+.++|+|.||.++-.++.+.|+ .+|+.+|.+++...
T Consensus 97 ~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred eEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999999999877 45999999876543
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.2e-07 Score=68.24 Aligned_cols=229 Identities=12% Similarity=0.029 Sum_probs=112.7
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
++|++=||.+..........+...+.|+.++.+-.+-....... ......++.+.+.+...... +..++++-.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~---~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSA---SPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccC---CCCCEEEEE
Confidence 35666677655443556666666678999999876532211111 12333333333333332222 123899999
Q ss_pred echhHHHHHHHhhh-----c----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 137 ESMGGAATMLMYFQ-----S----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~-----~----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+|.||...+..... . +-.+++++|+.+++.......... .+...+......+ .. ...
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~----~~~~~~~~~~~~~-------~~---~~~ 139 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSAR----AFSAALPKSSPRW-------FV---PLW 139 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHH----HHHHHcCccchhh-------HH---HHH
Confidence 99988776655431 1 111289999887765433211100 0000000000000 00 000
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEec
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYD 285 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 285 (323)
......+....................+..+ ........+|-|+++++.|.+++.+.+++..+... +-+++...++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~ 217 (240)
T PF05705_consen 140 PLLQFLLRLSIISYFIFGYPDVQEYYRRALN--DFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE 217 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHh--hhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC
Confidence 0000000000000000000000001111111 11223457899999999999999998888776653 2347788889
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHH
Q 020633 286 GMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.|..++ ....++.++.+.+|+
T Consensus 218 ~S~HV~H~---r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 218 DSPHVAHL---RKHPDRYWRAVDEFW 240 (240)
T ss_pred CCchhhhc---ccCHHHHHHHHHhhC
Confidence 99999985 344566777777763
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.1e-07 Score=70.78 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=74.3
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCC--cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWG--YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+.++||+||+..+-...-...++-....| ...+.+-+|..|.--+-.....+.+.-..+++.+|+.|..+.+ ..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--VK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--Cc
Confidence 3478999999998543212223333333333 4678888887765432211112445556889999999998865 66
Q ss_pred CeEEEEechhHHHHHHHhhhc--------CCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~vl~~~~~~ 167 (323)
+|+|++||||..+++....+. +.+ ++-+|+.+|-.+
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~k-i~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAK-IKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhh-hhheEeeCCCCC
Confidence 899999999999998776541 223 778888887554
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.3e-06 Score=62.58 Aligned_cols=251 Identities=12% Similarity=-0.026 Sum_probs=124.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH----H
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL----S 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~----~ 116 (323)
+-++..+.|. +..+.-|++-|-|.+....-..+...+.++|...+.+.-|-+|...........++ .+.|+. +
T Consensus 101 ~A~~~~liPQ--K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le-~vtDlf~mG~A 177 (371)
T KOG1551|consen 101 TARVAWLIPQ--KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLE-YVTDLFKMGRA 177 (371)
T ss_pred ceeeeeeccc--CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHH-HHHHHHHhhHH
Confidence 5556666664 34455555555554432111135566778889999999999998765433221222 223322 1
Q ss_pred HHHH----HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 117 FFKH----VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 117 ~l~~----l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
.|+. +.......-.+..++|-||||.+|......++.. |.-+=++++.......... .+......+.++...
T Consensus 178 ~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P-va~~p~l~~~~asvs~teg--~l~~~~s~~~~~~~~- 253 (371)
T KOG1551|consen 178 TIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP-VATAPCLNSSKASVSATEG--LLLQDTSKMKRFNQT- 253 (371)
T ss_pred HHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC-ccccccccccccchhhhhh--hhhhhhHHHHhhccC-
Confidence 2222 2111111245899999999999999988877665 5444444332111100000 000000111111100
Q ss_pred ccCCcccccccccCCh--HHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-----EEEEeeCCCcccCch
Q 020633 193 AAMPDNKMVGKAIKDP--EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-----FLTVHGTADGVTCPT 265 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~~ 265 (323)
. .......+.+ ......+... +..-.....+.+...+--..+....+| +.++.+++|..+|..
T Consensus 254 ---t--~~~~~~~r~p~Q~~~~~~~~~s-----rn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~ 323 (371)
T KOG1551|consen 254 ---T--NKSGYTSRNPAQSYHLLSKEQS-----RNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRT 323 (371)
T ss_pred ---c--chhhhhhhCchhhHHHHHHHhh-----hcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcccccc
Confidence 0 0000000000 0000000000 000111111222111101122333333 577889999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCccccc-CCCchhHHHHHHHHHHHHHHHH
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQ-GEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+..+.+.. |++++..++ .||...+ .+.+. +.+.|.+-|++..
T Consensus 324 gv~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dl----fRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 324 GVRSLQEIW--PGCEVRYLE-GGHVSAYLFKQDL----FRRAIVDGLDRLD 367 (371)
T ss_pred CcHHHHHhC--CCCEEEEee-cCceeeeehhchH----HHHHHHHHHHhhh
Confidence 999999999 899999999 5896653 33333 7777888887765
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.60 E-value=7e-07 Score=74.95 Aligned_cols=112 Identities=20% Similarity=0.183 Sum_probs=73.2
Q ss_pred ceEEEEecCCCCCcc-ccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcc------cCCChHHHhhcHHHHHHHHHhcCC
Q 020633 55 KATVYMTHGYGSDTG-WMFQKICISFATW-GYAVFAADLLGHGRSDGIRC------YLGDMEKVAASSLSFFKHVRDSEP 126 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~l~~~~~ 126 (323)
+|++|++-|=+.-.. +....+...|+++ |-.+++++.|-+|.|.+... ...+.++..+|+..++++++.+..
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 667777755442221 1222344555554 77899999999999974321 124789999999999999996642
Q ss_pred -CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 127 -YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 127 -~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+..|++++|-|+||.+|..+-.++|+. |.+.+..+++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~-~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHL-FDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT--SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCe-eEEEEeccceee
Confidence 2356999999999999999999999999 988888776654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.3e-07 Score=74.36 Aligned_cols=122 Identities=18% Similarity=0.138 Sum_probs=77.6
Q ss_pred cEEEEEecCC-CCCcceEEEEecCCCC---Ccc-ccHHHHHHHHhhCC-cEEEEecCCC--CcCCCC---C--cccCCCh
Q 020633 41 KLFTQSFLPL-DQKVKATVYMTHGYGS---DTG-WMFQKICISFATWG-YAVFAADLLG--HGRSDG---I--RCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~-~~~~~~~vv~~HG~~~---~~~-~~~~~~~~~l~~~g-~~v~~~d~~G--~G~s~~---~--~~~~~~~ 107 (323)
=|+..+|.|. +.++.|++|+|||++. +.. ..|+ ...|+++| +.|+++++|- .|.-.. . ... .-
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~--~~ 154 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAF--AS 154 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccc--cc
Confidence 4777888888 5567899999999863 222 1233 45688887 9999999992 122110 0 111 01
Q ss_pred HHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCccc
Q 020633 108 EKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFV 167 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~ 167 (323)
.--..|....|++++.. .+.|+..|.|+|+|.||+.++.+.+. |.. -++++|+.++...
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 12235566666666543 34568899999999999988776654 431 1666777777664
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.9e-07 Score=69.30 Aligned_cols=108 Identities=15% Similarity=0.051 Sum_probs=55.5
Q ss_pred cceEEEEecCCCCCcc--ccHHHHHHHHhh--CCcEEEEecCCCCcCC-CCCcccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 54 VKATVYMTHGYGSDTG--WMFQKICISFAT--WGYAVFAADLLGHGRS-DGIRCYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~--~~~~~~~~~l~~--~g~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+..+||+.||+|.+.. ..+..+.+.+.+ -|.-|.+++.- -+.+ +.......++.+.++.+.+.++....-
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L---- 78 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPEL---- 78 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG----
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhh----
Confidence 3568999999996531 134444433322 26778888763 2221 111112223455555555555443322
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..-+.++|+|.||.++-.++.+.+...|+.+|.+++..
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 23599999999999999999998776699999987654
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.3e-07 Score=73.53 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=72.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcE---EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYA---VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
.-+++++||++.+.. .|..+...+...|+. ++.+++++- .. .. +.....+.+...++.+....+ ..+
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~--~~----~~~~~~~ql~~~V~~~l~~~g--a~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG-DG--TY----SLAVRGEQLFAYVDEVLAKTG--AKK 128 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc-CC--Cc----cccccHHHHHHHHHHHHhhcC--CCc
Confidence 459999999976666 777777778777887 888888855 11 11 222223334444444333322 358
Q ss_pred eEEEEechhHHHHHHHhhhcC--CCceeEEEEccCcccC
Q 020633 132 GFLFGESMGGAATMLMYFQSE--PNTWTGLIFSAPLFVI 168 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p--~~~v~~~vl~~~~~~~ 168 (323)
+.++||||||.++..++...+ .. |+.++.++++...
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~-V~~~~tl~tp~~G 166 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANR-VASVVTLGTPHHG 166 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccce-EEEEEEeccCCCC
Confidence 999999999999998888877 66 9999999876553
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.3e-05 Score=63.26 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=69.5
Q ss_pred CcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCC--------------CCcCCCC------Cccc-CCChHH
Q 020633 53 KVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLL--------------GHGRSDG------IRCY-LGDMEK 109 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~------~~~~-~~~~~~ 109 (323)
.+-|+++++||..++.. .....+-+.....|+.++++|-. |-+.|-. .... .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 45688999999987732 23334445555668888886433 2222210 0000 123444
Q ss_pred Hh-hcHHHHHHHHHhcCCCCC--CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 110 VA-ASSLSFFKHVRDSEPYRD--LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 110 ~~-~d~~~~l~~l~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
++ +++-+.++... +.+. .+..++||||||.-|+.+|.++|++ ++.+...++.....
T Consensus 132 fl~~ELP~~~~~~f---~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAF---PADGTGDGRAIAGHSMGGYGALKLALKHPDR-FKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhc---CcccccCCceeEEEeccchhhhhhhhhCcch-hceecccccccccc
Confidence 33 34443333222 1112 2679999999999999999999998 99999999887655
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2e-05 Score=62.36 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=77.4
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.|....+....+++...-||+.|=|+-.. .-..+.+.|.++|+.|+.+|-.=|-+|.. +.++.+.|+..++++
T Consensus 246 aLPV~e~~a~~~~sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~ 318 (456)
T COG3946 246 ALPVVEVPAKPGNSDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRF 318 (456)
T ss_pred CCCceeeccCCCCcceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHH
Confidence 44444444332245677788888776655 56778999999999999999665555532 678899999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
...+.+ ..+++|+|+|+|+-+.-....+.|.
T Consensus 319 y~~~w~--~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 319 YARRWG--AKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHhhC--cceEEEEeecccchhhHHHHHhCCH
Confidence 888765 7799999999999887665555443
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.45 E-value=8.6e-06 Score=62.73 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=67.8
Q ss_pred ceEEEEecCCCCCcc-ccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 55 KATVYMTHGYGSDTG-WMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
..++|+.||+|.+.. .....+.+.+... |..+.++.. |.+ ........+.+.++.+.+.+...... ..-+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l----~~G~ 96 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL----SQGY 96 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh----hCcE
Confidence 468899999997643 1444555555332 666666654 332 22333335556566655555553332 2259
Q ss_pred EEEEechhHHHHHHHhhhcCC-CceeEEEEccCcc
Q 020633 133 FLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~ 166 (323)
.++|+|.||.++-.++.+.++ .+|+.+|.+++..
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999999877 4599999987654
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.4e-06 Score=61.88 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=49.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEE-EEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAV-FAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
+..|||..|||++.. .+..+. ...++.| +++|+|.. +++ .|+ .. ..++.
T Consensus 11 ~~LilfF~GWg~d~~-~f~hL~---~~~~~D~l~~yDYr~l-----------~~d---~~~--------~~----y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPS-PFSHLI---LPENYDVLICYDYRDL-----------DFD---FDL--------SG----YREIY 60 (213)
T ss_pred CeEEEEEecCCCChH-Hhhhcc---CCCCccEEEEecCccc-----------ccc---ccc--------cc----CceEE
Confidence 579999999998876 554432 1334654 56788722 111 011 11 34899
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
|+|+|||-.+|..+....+ ++..|.+++.
T Consensus 61 lvAWSmGVw~A~~~l~~~~---~~~aiAINGT 89 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP---FKRAIAINGT 89 (213)
T ss_pred EEEEeHHHHHHHHHhccCC---cceeEEEECC
Confidence 9999999999988765543 5555555543
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-06 Score=75.58 Aligned_cols=123 Identities=17% Similarity=0.079 Sum_probs=71.0
Q ss_pred EEEEEecCCCCC---cceEEEEecCCCCCccc---cHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHh
Q 020633 42 LFTQSFLPLDQK---VKATVYMTHGYGSDTGW---MFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 42 l~~~~~~~~~~~---~~~~vv~~HG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
|+..+|.|.... +.|++|+|||++...+. ....-...++.++..||++++| |+-.+...... .-..-.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl 186 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYGL 186 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhhh
Confidence 667778777643 46999999998633211 1222234455678999999999 33222111100 112234
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
.|...+|++++.. .+.|+.+|.|+|+|.||..+...+.. .... ++++|+.++...
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L-F~raI~~SGs~~ 246 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGL-FHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTS-BSEEEEES--TT
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccc-cccccccccccc
Confidence 6677777777654 34567799999999999887766655 2345 999999887443
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.4e-05 Score=59.65 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=68.6
Q ss_pred eEEEEecCCCCCcc-ccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 56 ATVYMTHGYGSDTG-WMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 56 ~~vv~~HG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.++|++||++..+. .....+.+.+.+. |..|+++|. |-|- .........+.++.+.+.+...... ..-+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~~m~~l----sqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVKQMPEL----SQGYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHhcchhc----cCceE
Confidence 58899999997654 2366777777665 889999986 4441 1111123444444444444433322 33589
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
++|.|.||.++-.++..-++.+|+..|.++++.
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999988886666699999887654
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.3e-05 Score=59.66 Aligned_cols=104 Identities=16% Similarity=0.138 Sum_probs=65.8
Q ss_pred CcceEEEEecCCC--CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCC--
Q 020633 53 KVKATVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYR-- 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~-- 128 (323)
+++.+|=|+.|.. ......|+.+.+.|+++||.|++.-+.- | -++..--.+........++.+.......
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4677888888863 3344588999999999999999987641 1 0000011222233444555555443221
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEcc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~ 163 (323)
.-+++-+|||+|+-+-+.+...++.. -++-++++
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~-r~gniliS 122 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVE-RAGNILIS 122 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCc-ccceEEEe
Confidence 23788999999999988887776544 45666665
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.1e-06 Score=55.13 Aligned_cols=61 Identities=20% Similarity=0.268 Sum_probs=51.3
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..|+|++.++.|+.+|.+.++.+.+.+ ++..++.+++.||..+. .. ..-+.+.+.+||.+-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~-~~---s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYA-GG---SPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceec-CC---ChHHHHHHHHHHHcC
Confidence 589999999999999999999999999 67899999999999983 12 233677788888643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.20 E-value=9e-05 Score=59.52 Aligned_cols=154 Identities=16% Similarity=0.203 Sum_probs=92.5
Q ss_pred CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC-cccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 126 PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP-LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 126 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
+....+++|.|.|==|..++..|+. ..+ |++++-+.- ...+. ..+......+...|......
T Consensus 168 ~~~i~~FvV~GaSKRGWTtWltaa~-D~R-V~aivP~Vid~LN~~---------~~l~h~y~~yG~~ws~a~~d------ 230 (367)
T PF10142_consen 168 GVNIEKFVVTGASKRGWTTWLTAAV-DPR-VKAIVPIVIDVLNMK---------ANLEHQYRSYGGNWSFAFQD------ 230 (367)
T ss_pred CCCccEEEEeCCchHhHHHHHhhcc-Ccc-eeEEeeEEEccCCcH---------HHHHHHHHHhCCCCccchhh------
Confidence 3346789999999999999998884 445 888875432 11111 11111111222122221111
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
............+. ...+....+ ......++++|-++|.|..|++..+.....++..+++ ...+..+
T Consensus 231 --------Y~~~gi~~~l~tp~---f~~L~~ivD-P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~v 297 (367)
T PF10142_consen 231 --------YYNEGITQQLDTPE---FDKLMQIVD-PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYV 297 (367)
T ss_pred --------hhHhCchhhcCCHH---HHHHHHhcC-HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeC
Confidence 01111111111111 111111111 1223356799999999999999999999999999964 4678899
Q ss_pred cCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 285 DGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+++|.... ..+.+.+..|+.....
T Consensus 298 PN~~H~~~~-------~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 298 PNAGHSLIG-------SDVVQSLRAFYNRIQN 322 (367)
T ss_pred CCCCcccch-------HHHHHHHHHHHHHHHc
Confidence 999999982 4478889999988654
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.3e-06 Score=66.76 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=63.1
Q ss_pred cHHHHHHHHhhCCcEE-----EE-ecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHH
Q 020633 71 MFQKICISFATWGYAV-----FA-ADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAAT 144 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v-----~~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a 144 (323)
.|..+++.|.+.||.. .+ +|+|- + .. ..+.+...+...|+...... ..+++|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~---~~---~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---S---PA---ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---c---hh---hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHH
Confidence 7899999999888742 22 67771 1 11 34567777888888776553 5699999999999999
Q ss_pred HHHhhhcCC-----CceeEEEEccCccc
Q 020633 145 MLMYFQSEP-----NTWTGLIFSAPLFV 167 (323)
Q Consensus 145 ~~~a~~~p~-----~~v~~~vl~~~~~~ 167 (323)
..+....+. ..|+++|.++++..
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 998887643 24999999987654
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.0001 Score=55.67 Aligned_cols=45 Identities=11% Similarity=0.177 Sum_probs=37.9
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+...+..+.++-.++|||+||.+++.....+|+. +...++++|..
T Consensus 128 Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~-F~~y~~~SPSl 172 (264)
T COG2819 128 IEARYRTNSERTAIIGHSLGGLFVLFALLTYPDC-FGRYGLISPSL 172 (264)
T ss_pred HhcccccCcccceeeeecchhHHHHHHHhcCcch-hceeeeecchh
Confidence 3334445577899999999999999999999999 99999999864
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.6e-05 Score=66.91 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=63.9
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHh----------------hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFA----------------TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~----------------~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
++-+|+||+|..|+.. .-+.++.... ...|+.+++|+-+- -..-+..++.+.++-+.+.
T Consensus 88 sGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHH
Confidence 4679999999987754 3333333222 22367777776531 0011112556666666666
Q ss_pred HHHHHhcCC----CC---CCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccCcccCCC
Q 020633 118 FKHVRDSEP----YR---DLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 118 l~~l~~~~~----~~---~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~~~~ 170 (323)
|+.+...+. .+ +..|+++||||||.+|...+.. .++. |.-++..+++...++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~s-VntIITlssPH~a~P 224 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGS-VNTIITLSSPHAAPP 224 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccch-hhhhhhhcCcccCCC
Confidence 665544322 11 3459999999999999765543 1233 666666666554443
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00012 Score=55.40 Aligned_cols=116 Identities=6% Similarity=0.002 Sum_probs=79.0
Q ss_pred EEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 44 TQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 44 ~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
+....+....+.|.|+++-...++.....+.-.+.|... ..|+..|+-.-..-+-..+. .+++++++-+.+.+..++.
T Consensus 92 F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~Gp 169 (415)
T COG4553 92 FERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLGP 169 (415)
T ss_pred hhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhCC
Confidence 333444444567888888888887665677778888776 78898888754443333333 3889999999999999864
Q ss_pred cCCCCCCCeEEEEechhH-----HHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 124 SEPYRDLPGFLFGESMGG-----AATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 124 ~~~~~~~~~~l~G~S~Gg-----~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.+++++-+.-+ .+++..+...|.. ...+++++++.+..
T Consensus 170 -------~~hv~aVCQP~vPvLAAisLM~~~~~p~~-PssMtlmGgPIDaR 212 (415)
T COG4553 170 -------DAHVMAVCQPTVPVLAAISLMEEDGDPNV-PSSMTLMGGPIDAR 212 (415)
T ss_pred -------CCcEEEEecCCchHHHHHHHHHhcCCCCC-CceeeeecCccccc
Confidence 36777777654 3444444446665 78888888776543
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00029 Score=56.48 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=56.0
Q ss_pred EEEEecCC-CCcCCCCCcccC-CChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----c-----C
Q 020633 85 AVFAADLL-GHGRSDGIRCYL-GDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----S-----E 152 (323)
Q Consensus 85 ~v~~~d~~-G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~-----p 152 (323)
.++.+|.| |.|.|-...... .+-+..++|+..+++..-...+ ....+++|.|.|+||..+-.+|.. . +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 58899999 888886432211 1223344777777766554443 346689999999999877766654 1 1
Q ss_pred CCceeEEEEccCcccC
Q 020633 153 PNTWTGLIFSAPLFVI 168 (323)
Q Consensus 153 ~~~v~~~vl~~~~~~~ 168 (323)
.-+++|+++-+|+...
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 2248999998887654
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00028 Score=56.52 Aligned_cols=107 Identities=13% Similarity=-0.021 Sum_probs=82.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC--CChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL--GDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|+|+..-|.+.............|. -+-+.+++|-++.|.+.+... .++.+.+.|...+++.++.-+ .+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY---~~ 134 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY---PG 134 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc---cC
Confidence 4579999999998654323334444442 346889999999998654322 378889999999999998877 56
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+++--|.|-||+.++.+=.-+|+. |++.|....+.
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~D-VD~tVaYVAP~ 169 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDD-VDGTVAYVAPN 169 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCC-CCeeeeeeccc
Confidence 899999999999998887779998 99999854443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00036 Score=53.59 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=64.3
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC----CcEEEEecCCCCcCCCCCcccCCChHHHhhc-HHHHHHHHHhcCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW----GYAVFAADLLGHGRSDGIRCYLGDMEKVAAS-SLSFFKHVRDSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~ 127 (323)
.+.|+++++||--....-....+.+.|... .-.++.+|.-.- .......+..+++... ..+++=++...++.
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~---~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~ 172 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDV---KKRREELHCNEAYWRFLAQELLPYVEERYPT 172 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCH---HHHHHHhcccHHHHHHHHHHhhhhhhccCcc
Confidence 568999999986432111122334444443 245666665421 0001111122222222 23344455555442
Q ss_pred --CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 128 --RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 128 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+...-+|+|.|+||.+++..+..+|+. +..++..+|...
T Consensus 173 ~~~a~~r~L~G~SlGG~vsL~agl~~Pe~-FG~V~s~Sps~~ 213 (299)
T COG2382 173 SADADGRVLAGDSLGGLVSLYAGLRHPER-FGHVLSQSGSFW 213 (299)
T ss_pred cccCCCcEEeccccccHHHHHHHhcCchh-hceeeccCCccc
Confidence 234568999999999999999999999 999988887654
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.4e-05 Score=62.11 Aligned_cols=110 Identities=16% Similarity=0.212 Sum_probs=78.7
Q ss_pred eEEEEecCCCCCccc------cHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc---------CCChHHHhhcHHHHHHH
Q 020633 56 ATVYMTHGYGSDTGW------MFQKICISFATWGYAVFAADLLGHGRSDGIRCY---------LGDMEKVAASSLSFFKH 120 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~~~~~~~~~d~~~~l~~ 120 (323)
.+|+|.-|--++..| +.-.+++.| +--++..+.|-+|+|.+--.. ..+.++...|...+|.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 688888887665442 112233333 567899999999999732111 12568888999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE-ccCcccCC
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF-SAPLFVIP 169 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl-~~~~~~~~ 169 (323)
++.+......+|+++|-|+||++|..+=.++|.. |.|... .+|..-+.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi-v~GAlAaSAPvl~f~ 206 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI-VLGALAASAPVLYFE 206 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhh-hhhhhhccCceEeec
Confidence 9988654567999999999999999999999998 655554 44444333
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00051 Score=49.63 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=64.8
Q ss_pred CcceEEEEecCCCCCccccHH---------------HHHHHHhhCCcEEEEecCCC---CcCCC-CCcccCCChHHHhhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQ---------------KICISFATWGYAVFAADLLG---HGRSD-GIRCYLGDMEKVAAS 113 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~---------------~~~~~l~~~g~~v~~~d~~G---~G~s~-~~~~~~~~~~~~~~d 113 (323)
++...+|+|||.|.-....|. ++++...+.||.|+..+.-- +-.+. .+..+ ...-++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky---irt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY---IRTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh---ccchHHH
Confidence 456799999998853221332 23455556799999987531 11111 11111 1122222
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC-ceeEEEEccCcccCC
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN-TWTGLIFSAPLFVIP 169 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~v~~~vl~~~~~~~~ 169 (323)
+..+-.++-... ....+.++.||.||...+.+..++|+. .|.++.+..++...+
T Consensus 176 ~~yvw~~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 176 AKYVWKNIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSP 230 (297)
T ss_pred HHHHHHHHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCc
Confidence 332222222221 255799999999999999999998752 277777766554433
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.8e-05 Score=44.00 Aligned_cols=50 Identities=20% Similarity=0.250 Sum_probs=28.4
Q ss_pred cccccCcccceeEEEcCCC-cEEEEEecCCC-----CCcceEEEEecCCCCCccccH
Q 020633 22 YYTSQGVRNGKKYFETPNG-KLFTQSFLPLD-----QKVKATVYMTHGYGSDTGWMF 72 (323)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-----~~~~~~vv~~HG~~~~~~~~~ 72 (323)
+....+.+.+++.+.+.|| -|......+++ ..++|+|++.||+.+++. .|
T Consensus 4 ~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 4 LIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp HHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred HHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 3456788999999999999 76665554432 256899999999998776 44
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00033 Score=57.38 Aligned_cols=112 Identities=17% Similarity=0.117 Sum_probs=81.4
Q ss_pred cceEEEEecCCCCCccccH-----HHHHHHHhhCCcEEEEecCCCCcCCCCCccc------CCChHHHhhcHHHHHHHHH
Q 020633 54 VKATVYMTHGYGSDTGWMF-----QKICISFATWGYAVFAADLLGHGRSDGIRCY------LGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~l~ 122 (323)
..|..|+|-|=|.-.. .| ..+.....+.|-.|+.++.|-+|.|.+.... ..+..+...|+..+|+++.
T Consensus 85 ~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 3677777777654331 12 1223333344889999999999988643221 2267888899999999999
Q ss_pred hcCCCCCC-CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 123 DSEPYRDL-PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 123 ~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+.+.... |++.+|-|+-|.++..+=.++|+. +.+.|..+++..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel-~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL-TVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchh-heeeccccccee
Confidence 98765444 999999999999999999999999 777777665543
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.79 E-value=7.2e-05 Score=53.08 Aligned_cols=58 Identities=21% Similarity=0.193 Sum_probs=40.2
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcc
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLF 166 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~ 166 (323)
.......+...++....+++ ..+++++|||+||.+|..++...... .+..++..+++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p--~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYP--DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCC--CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455666666766655444 66899999999999999988876441 255666666544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0024 Score=45.85 Aligned_cols=120 Identities=16% Similarity=0.088 Sum_probs=71.3
Q ss_pred EEEecCCCCCcceEEEEecCCCCCccccHH-------HHHHH----H--hhCCcEEEEecCCCCcCCCC---CcccCCCh
Q 020633 44 TQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KICIS----F--ATWGYAVFAADLLGHGRSDG---IRCYLGDM 107 (323)
Q Consensus 44 ~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-------~~~~~----l--~~~g~~v~~~d~~G~G~s~~---~~~~~~~~ 107 (323)
...+|... ..+.+.++++|.+.+...... .+.+. + ...+-.|-++-+.||-.-.. .......-
T Consensus 9 ava~GD~d-~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A 87 (177)
T PF06259_consen 9 AVAVGDPD-TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYA 87 (177)
T ss_pred EEEECCcC-CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHH
Confidence 34566555 667899999999865431111 11111 1 11222444444444422100 01111123
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+.-+.++..+++.|.... ....++.++|||+|+.++-..+...+.. ++.+|+++++.
T Consensus 88 ~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~-vddvv~~GSPG 144 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLR-VDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCC-cccEEEECCCC
Confidence 556678888888888776 2366899999999999998877774555 99999887653
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00015 Score=59.05 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=57.5
Q ss_pred ccHHHHHHHHhhCCcE------EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHH
Q 020633 70 WMFQKICISFATWGYA------VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAA 143 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~ 143 (323)
+.|..+++.|..-||. -..+|+|- |.... ...+++...+...|+...+..+ .+|++|++||||+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~---e~rd~yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~ 195 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNS---EERDQYLSKLKKKIETMYKLNG--GKKVVLISHSMGGLY 195 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCCh---hHHHHHHHHHHHHHHHHHHHcC--CCceEEEecCCccHH
Confidence 4788899999988886 45677772 21111 1456777888888887777664 579999999999999
Q ss_pred HHHHhhhcCC
Q 020633 144 TMLMYFQSEP 153 (323)
Q Consensus 144 a~~~a~~~p~ 153 (323)
.+.+...+++
T Consensus 196 ~lyFl~w~~~ 205 (473)
T KOG2369|consen 196 VLYFLKWVEA 205 (473)
T ss_pred HHHHHhcccc
Confidence 9999988776
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00072 Score=51.64 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=39.6
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----CCceeEEEEccCcc
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~vl~~~~~ 166 (323)
.+.....++...+..+..+++ ..++++.|||+||.+|..++.... ...+..+...+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p--~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYP--DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCC--CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 445555666666666665554 668999999999999998877532 22266555555544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0036 Score=47.19 Aligned_cols=49 Identities=12% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----CCceeEEEEccCcc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~vl~~~~~ 166 (323)
..+.++.+.... +.++.+.|||.||.+|..++...+ ++ |.+++..+++.
T Consensus 71 A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~r-I~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANCDDEIQDR-ISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHccHHHhhh-eeEEEEeeCCC
Confidence 344455554443 336999999999999999888733 35 88888776654
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00038 Score=58.78 Aligned_cols=93 Identities=10% Similarity=0.041 Sum_probs=60.0
Q ss_pred ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHh
Q 020633 70 WMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMY 148 (323)
Q Consensus 70 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a 148 (323)
+.|..+++.|++.||. -.++.|...--... .....-+.+...+...|+.+....+ +.+++|+||||||.+++.+.
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHH
Confidence 4678999999999996 33433332111100 0011336666778888887765543 56999999999999999876
Q ss_pred hhcC--------------CCceeEEEEccCcc
Q 020633 149 FQSE--------------PNTWTGLIFSAPLF 166 (323)
Q Consensus 149 ~~~p--------------~~~v~~~vl~~~~~ 166 (323)
.... ++.|++.|.++++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 6321 11378888887654
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00044 Score=48.21 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=35.4
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----C--CceeEEEEccCcc
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----P--NTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~--~~v~~~vl~~~~~ 166 (323)
.+.+.+.+.++.+..+++ ..++++.|||+||.+|..++.... . ..+..+..-+|..
T Consensus 45 ~~~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 344556666666666654 568999999999999988887621 1 2255555555543
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0014 Score=57.10 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=68.1
Q ss_pred cEEEEEecCCCCCc--ceEEEEecCCCCCccc--cH--HHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHH
Q 020633 41 KLFTQSFLPLDQKV--KATVYMTHGYGSDTGW--MF--QKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 41 ~l~~~~~~~~~~~~--~~~vv~~HG~~~~~~~--~~--~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 110 (323)
-|+..+|.|..... .|++|++||++-.... .+ ......+..+..-|+.+.+| |+.... ......++.-
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~~gN~gl- 173 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAAPGNLGL- 173 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CCCCCCcccH-
Confidence 46777787775332 6999999998743221 12 12222333445788888888 221211 1111112221
Q ss_pred hhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCc
Q 020633 111 AASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPL 165 (323)
Q Consensus 111 ~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~ 165 (323)
.|....+++++.. .+.++.+|.|+|||.||..+..+...- ... +.++|..++.
T Consensus 174 -~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~L-F~~aI~~SG~ 231 (545)
T KOG1516|consen 174 -FDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGL-FHKAISMSGN 231 (545)
T ss_pred -HHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHH-HHHHHhhccc
Confidence 2555555555543 335688999999999999987766541 122 4555555443
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.016 Score=46.45 Aligned_cols=68 Identities=10% Similarity=0.042 Sum_probs=49.4
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
....+.+.+.+..|.++|....+++.+.... -+++.+-+.++-|..++ ..+.....+...+|++....
T Consensus 223 ~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~---r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 223 ELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHF---RSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeee---ccCcHHHHHHHHHHHHhccc
Confidence 3356788999999999999988888555432 34555556778888875 34556688888899987654
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0014 Score=47.57 Aligned_cols=78 Identities=12% Similarity=0.011 Sum_probs=50.2
Q ss_pred cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh------cCCCcee
Q 020633 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ------SEPNTWT 157 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~~v~ 157 (323)
..+..+++|-.... ..+..+...-+.++...|+....+.+ ..+++|+|+|.|+.++..++.. ..++ |.
T Consensus 40 ~~~~~V~YpA~~~~---~~y~~S~~~G~~~~~~~i~~~~~~CP--~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~-I~ 113 (179)
T PF01083_consen 40 VAVQGVEYPASLGP---NSYGDSVAAGVANLVRLIEEYAARCP--NTKIVLAGYSQGAMVVGDALSGDGLPPDVADR-IA 113 (179)
T ss_dssp EEEEE--S---SCG---GSCHHHHHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHH-EE
T ss_pred eEEEecCCCCCCCc---ccccccHHHHHHHHHHHHHHHHHhCC--CCCEEEEecccccHHHHHHHHhccCChhhhhh-EE
Confidence 55666677743221 11222456666778888887777776 7799999999999999998776 1234 88
Q ss_pred EEEEccCccc
Q 020633 158 GLIFSAPLFV 167 (323)
Q Consensus 158 ~~vl~~~~~~ 167 (323)
++++++-+..
T Consensus 114 avvlfGdP~~ 123 (179)
T PF01083_consen 114 AVVLFGDPRR 123 (179)
T ss_dssp EEEEES-TTT
T ss_pred EEEEecCCcc
Confidence 9998875543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0022 Score=53.06 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=74.9
Q ss_pred EEEEEecC-CCCCcceEEEEecCCCCCccccHHHHHHH-------------------HhhCCcEEEEec-CCCCcCCCC-
Q 020633 42 LFTQSFLP-LDQKVKATVYMTHGYGSDTGWMFQKICIS-------------------FATWGYAVFAAD-LLGHGRSDG- 99 (323)
Q Consensus 42 l~~~~~~~-~~~~~~~~vv~~HG~~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d-~~G~G~s~~- 99 (323)
..++.+.+ ....++|.|+++.|++|.++ .+-.+.+. +... -.++.+| .-|.|.|..
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~ 164 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRAL 164 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccccc
Confidence 33444444 33356899999999998876 55444221 1111 3688999 448888874
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhcCC---CCCCCeEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCccc
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDSEP---YRDLPGFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFV 167 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~ 167 (323)
......++....+|+..+.+.+....+ -...+.+|+|.|+||.-+..+|..--+. ..++++++++...
T Consensus 165 ~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 165 GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 223334666666777766665543321 0123789999999999888877653221 1455555555443
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0032 Score=51.31 Aligned_cols=42 Identities=21% Similarity=0.255 Sum_probs=30.9
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
...+++...++.+...++....+|++.|||+||.+|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 455677777777777665212249999999999999998864
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0077 Score=50.68 Aligned_cols=119 Identities=13% Similarity=0.138 Sum_probs=66.2
Q ss_pred CCcEEEEEecCCCCCcceEEEEecCCCCC------ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 39 NGKLFTQSFLPLDQKVKATVYMTHGYGSD------TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 39 ~g~l~~~~~~~~~~~~~~~vv~~HG~~~~------~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.|+-.|..|.++.+.++-.|+-+||+|.- ++.+.+.++..| |.-|+.+|+----+.+ +....+
T Consensus 380 ~g~~~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP--------FPRale 448 (880)
T KOG4388|consen 380 NGQRSLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP--------FPRALE 448 (880)
T ss_pred cCccccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC--------CCcHHH
Confidence 34334555555543557788999998732 122334444443 7899999985333222 222223
Q ss_pred cHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccCcccC
Q 020633 113 SSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 113 d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~~ 168 (323)
.+.-..-|+.... +..+++|+++|-|.||.+.+..+.+ +.-+..+++++.-++.-.
T Consensus 449 Ev~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 449 EVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred HHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 3333333322211 1236799999999999876555443 222335788887665443
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.019 Score=39.69 Aligned_cols=77 Identities=10% Similarity=-0.027 Sum_probs=48.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcE-EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYA-VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
...||+.-|||..++ ....+. ...++. ++++|++.... ++ |+.+ ...+-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi---lpeN~dl~lcYDY~dl~l---------df-----DfsA------------y~hir 60 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI---LPENHDLLLCYDYQDLNL---------DF-----DFSA------------YRHIR 60 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc---CCCCCcEEEEeehhhcCc---------cc-----chhh------------hhhhh
Confidence 458999999997766 444332 234454 56788873321 11 1111 11467
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
++++|||-.+|-++....+ ++..+.+++
T Consensus 61 lvAwSMGVwvAeR~lqg~~---lksatAiNG 88 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR---LKSATAING 88 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc---ccceeeecC
Confidence 8999999999998887655 556666554
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.07 Score=41.68 Aligned_cols=133 Identities=15% Similarity=0.230 Sum_probs=87.8
Q ss_pred EEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHH--------------HHhhCCcEEEEecCC-CCcC
Q 020633 35 FETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICI--------------SFATWGYAVFAADLL-GHGR 96 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~--------------~l~~~g~~v~~~d~~-G~G~ 96 (323)
+...++ ..+++.|.... ...+|..+.+.|.++.++.-|-.+-+ .| +. ..++.+|-| |.|.
T Consensus 8 v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k~-adllfvDnPVGaGf 85 (414)
T KOG1283|consen 8 VDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-KD-ADLLFVDNPVGAGF 85 (414)
T ss_pred eeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-hh-ccEEEecCCCcCce
Confidence 344456 67666665432 14578889999987665423332221 12 22 567888877 7777
Q ss_pred CC--CCcccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc------C--CCceeEEEEccCc
Q 020633 97 SD--GIRCYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS------E--PNTWTGLIFSAPL 165 (323)
Q Consensus 97 s~--~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~------p--~~~v~~~vl~~~~ 165 (323)
|- +...+..+..+.+.|+.++++.+-...+ ....|++++-.|+||-+|..++... . +.++.+++|-.++
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 74 4444455778899999999988765543 3456899999999999998877652 1 2237788887777
Q ss_pred ccCC
Q 020633 166 FVIP 169 (323)
Q Consensus 166 ~~~~ 169 (323)
.+..
T Consensus 166 ISP~ 169 (414)
T KOG1283|consen 166 ISPE 169 (414)
T ss_pred cChh
Confidence 6543
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0085 Score=39.47 Aligned_cols=39 Identities=8% Similarity=0.063 Sum_probs=23.5
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG 69 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~ 69 (323)
.-.++.+..+| .||+....+.+ ....+|||+||++++--
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GG
T ss_pred cCCCeeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHH
Confidence 34566666789 99999888765 56789999999998754
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0082 Score=48.97 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=18.8
Q ss_pred CCCeEEEEechhHHHHHHHhhh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..++.+.|||+||.+|+..|..
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHH
Confidence 3479999999999999988754
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.011 Score=48.93 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=23.7
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+.+.++.+..+++ ..++++.|||+||.+|..++.
T Consensus 264 I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNK--NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHH
Confidence 3444444333333 568999999999999988765
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0095 Score=42.89 Aligned_cols=66 Identities=18% Similarity=0.264 Sum_probs=50.7
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHc---CCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKA---SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|-|-|+.|.+....+.....+.+ +......++.+|+||+..+.-+ ...+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-RWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-hhhhhhhHHHHHHHHhC
Confidence 578888999999999988766655554 2233567788999999986544 56788999999998753
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0082 Score=48.35 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=26.5
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+.+.++.+...++....+|++.|||+||.+|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 444444555544443223369999999999999988875
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0092 Score=48.81 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=25.2
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+.++.+...++....++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 344444444443332112368999999999999988865
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.011 Score=43.62 Aligned_cols=74 Identities=14% Similarity=0.037 Sum_probs=42.9
Q ss_pred HHHHhhCCcEEEEecCCCCcCCCCC----cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 76 CISFATWGYAVFAADLLGHGRSDGI----RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 76 ~~~l~~~g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+..|... .+|+++-+|=.....-. .......+--..|+.+..++...... .+.+++|+|||.|+.+..++..++
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3344444 67888887733211100 00001122233666666655444332 256899999999999999998874
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.026 Score=48.16 Aligned_cols=37 Identities=24% Similarity=0.377 Sum_probs=25.6
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+...+..+...++ +-+++++|||+||.+|..++..
T Consensus 235 ~~i~~~L~kal~~~P--dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 235 KLSTPCLLKALDEYP--DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEeccChHHHHHHHHHHH
Confidence 334444444444443 5589999999999999887765
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.075 Score=45.29 Aligned_cols=119 Identities=18% Similarity=0.278 Sum_probs=71.8
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHH----HHHHHhhCCcEEEEecCCCCcCCCC--CcccCCChHHHh---
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK----ICISFATWGYAVFAADLLGHGRSDG--IRCYLGDMEKVA--- 111 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~--- 111 (323)
.|.+.++.|.+ =..-++.+-|.|......+.. +...+ .+||.+++-|- ||..+.. ......+.+.+.
T Consensus 16 ~i~fev~LP~~--WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa 91 (474)
T PF07519_consen 16 NIRFEVWLPDN--WNGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFA 91 (474)
T ss_pred eEEEEEECChh--hccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHH
Confidence 78888888873 112344444444332212222 33334 67999999995 7765533 111112222221
Q ss_pred --------hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 112 --------ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 --------~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.--+++++..- +.....-+..|.|-||.-++..|.++|+. +++|+..+|...
T Consensus 92 ~ra~h~~~~~aK~l~~~~Y---g~~p~~sY~~GcS~GGRqgl~~AQryP~d-fDGIlAgaPA~~ 151 (474)
T PF07519_consen 92 YRALHETTVVAKALIEAFY---GKAPKYSYFSGCSTGGRQGLMAAQRYPED-FDGILAGAPAIN 151 (474)
T ss_pred hhHHHHHHHHHHHHHHHHh---CCCCCceEEEEeCCCcchHHHHHHhChhh-cCeEEeCCchHH
Confidence 11222232222 22255789999999999999999999999 999999998764
|
It also includes several bacterial homologues of unknown function. |
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0085 Score=50.15 Aligned_cols=38 Identities=18% Similarity=0.353 Sum_probs=25.1
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+++..+++....... ..++.|.|||+||.+|+..|..
T Consensus 301 l~eV~rLv~~Yk~~ge--~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGE--EVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCC--cceEEEeccCHHHHHHHHHHHH
Confidence 3445555544432111 3479999999999999988854
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.013 Score=47.82 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=26.9
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.+-++.+...++....+|++.|||+||.+|+..|..
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445555555555443212369999999999999988864
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.011 Score=49.01 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=23.8
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
...++.+..+++ ..++++.|||+||.+|..++.
T Consensus 271 ~~~Lk~ll~~~p--~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 271 LRHLKEIFDQNP--TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHCC--CCeEEEEecCHHHHHHHHHHH
Confidence 334444444443 568999999999999998875
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.033 Score=39.13 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=33.8
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+...++-|-||||..|..+..++|+. +.++|.+++.++
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~l-ftkvialSGvYd 137 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHL-FTKVIALSGVYD 137 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhH-hhhheeecceee
Confidence 34678899999999999999999999 999999998765
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.012 Score=49.17 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
+...++.+..+++ ..++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 4555555555554 668999999999999998874
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.017 Score=48.30 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=25.9
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+-++.+...++....+|++.|||+||.+|...|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344444444444443113379999999999999988765
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.024 Score=43.34 Aligned_cols=44 Identities=27% Similarity=0.416 Sum_probs=35.0
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.+.+..+..+++..++..++ ..++.+.|||+||.+|..+..++.
T Consensus 255 ~dryySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 255 FDRYYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hcchhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC
Confidence 34455666777777777777 789999999999999998877764
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.024 Score=43.34 Aligned_cols=44 Identities=27% Similarity=0.416 Sum_probs=35.0
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
.+.+..+..+++..++..++ ..++.+.|||+||.+|..+..++.
T Consensus 255 ~dryySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 255 FDRYYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hcchhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC
Confidence 34455666777777777777 789999999999999998877764
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.053 Score=50.12 Aligned_cols=97 Identities=19% Similarity=0.171 Sum_probs=60.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
...|++.|+|.+-+... .+..++..| ..|.+|.-........+++..+.-...-++.++ + .++.
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ---P--~GPY 2184 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ---P--EGPY 2184 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC---C--CCCe
Confidence 45789999999876554 444444433 234444433222223366666555444444444 3 5589
Q ss_pred EEEEechhHHHHHHHhhhcC--CCceeEEEEccCcc
Q 020633 133 FLFGESMGGAATMLMYFQSE--PNTWTGLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p--~~~v~~~vl~~~~~ 166 (323)
.++|+|+|+.++..+|.... +. ...+|++++..
T Consensus 2185 rl~GYSyG~~l~f~ma~~Lqe~~~-~~~lillDGsp 2219 (2376)
T KOG1202|consen 2185 RLAGYSYGACLAFEMASQLQEQQS-PAPLILLDGSP 2219 (2376)
T ss_pred eeeccchhHHHHHHHHHHHHhhcC-CCcEEEecCch
Confidence 99999999999999887632 22 55688876543
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.051 Score=43.30 Aligned_cols=62 Identities=18% Similarity=0.426 Sum_probs=46.9
Q ss_pred CCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++.+|-.++.++.|.+.++..+...++.+++ ...+..+|+..|... ... +.+.+..|+.+.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~----n~~---i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI----NQF---IKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh----HHH---HHHHHHHHHHHH
Confidence 56789999999999999999999999999942 245788899999887 222 344455555543
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.028 Score=47.22 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=25.8
Q ss_pred hcHHHHHHHHHhcC----CCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSE----PYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+++.+.|+.+...+ .....+|.+.|||+||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44455555554433 1113479999999999999988753
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.031 Score=47.07 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=26.7
Q ss_pred hhcHHHHHHHHHhcCCC---CCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPY---RDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.+.+.++.+...++. ...+|.+.|||+||.+|+..|..
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455555555444321 13489999999999999988754
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.039 Score=46.35 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=27.0
Q ss_pred hhcHHHHHHHHHhcCCC---CCCCeEEEEechhHHHHHHHhhh
Q 020633 111 AASSLSFFKHVRDSEPY---RDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+++.+.|+.+...++. ...+|.+.|||+||.+|...|..
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555555554431 12479999999999999988754
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.14 Score=38.77 Aligned_cols=64 Identities=20% Similarity=0.214 Sum_probs=37.7
Q ss_pred CcEEEEecCCCC-cC-CC-CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 83 GYAVFAADLLGH-GR-SD-GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 83 g~~v~~~d~~G~-G~-s~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
|+.+..+++|.. +- +. +......+..+-++.+.+.|+..... ..+++|+|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~----~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAA----GGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccC----CCCEEEEEECHHHHHHHHHHHH
Confidence 577788888862 11 00 11111124444444444444443323 5689999999999999887765
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.04 Score=44.59 Aligned_cols=89 Identities=15% Similarity=0.070 Sum_probs=45.3
Q ss_pred CcceEEEEecCCCC-CccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCCh-HHHhhcHHHHHHHHHhcCCCC
Q 020633 53 KVKATVYMTHGYGS-DTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDM-EKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~~-~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+++-.||+.||+-+ +.. .|...+....+. +..++.....+. ..........+ ...++++.+.+....
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T~~Gv~~lG~Rla~~~~e~~~~~s------ 148 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNN--MCQTFDGVDVLGERLAEEVKETLYDYS------ 148 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccc--hhhccccceeeecccHHHHhhhhhccc------
Confidence 45679999999977 334 555555555443 333333333322 11111100000 222233333332222
Q ss_pred CCCeEEEEechhHHHHHHHhhh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
-.++-++|||+||.++..+...
T Consensus 149 i~kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEe
Confidence 2389999999999987654443
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=94.25 E-value=1.8 Score=35.67 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=26.7
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.-+.++++++....-.+.++++|.|.|.||.-++..+..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 345667777666511235689999999999988765543
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.067 Score=43.35 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=26.4
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+.+.++.+...++ .-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 344444555444444 5589999999999999988765
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.24 Score=40.01 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=29.0
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCC----ceeEEEEccCccc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPN----TWTGLIFSAPLFV 167 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~----~v~~~vl~~~~~~ 167 (323)
..|+.|+|||+|+.+.........++ -|..+++++.+..
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 56899999999999987766553222 2788888886654
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.27 Score=42.11 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=35.4
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh-----cCC-----CceeEEEEccCcc
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ-----SEP-----NTWTGLIFSAPLF 166 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~-----~~v~~~vl~~~~~ 166 (323)
++.-...+++.+....-.++.+++.+||||||.++-.+... .|+ ++-+++|+++.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 33334456666655443446789999999999988665544 232 1256777766543
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.36 E-value=0.87 Score=38.28 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=50.3
Q ss_pred EEEEEecC-CCCCcceEEEEecCCCCCc---c-ccHHHHHHHHhhC-CcEEEEecCC----CC---cCCCCCcccCCChH
Q 020633 42 LFTQSFLP-LDQKVKATVYMTHGYGSDT---G-WMFQKICISFATW-GYAVFAADLL----GH---GRSDGIRCYLGDME 108 (323)
Q Consensus 42 l~~~~~~~-~~~~~~~~vv~~HG~~~~~---~-~~~~~~~~~l~~~-g~~v~~~d~~----G~---G~s~~~~~~~~~~~ 108 (323)
|+..+|.| .++....++|.|-|+|--+ . ..|. .+.|+.. ...|+.+++| |+ +..+..++...-++
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~D 198 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLD 198 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHH
Confidence 66777877 3334456888888876321 1 1332 3344443 3556677776 11 11212222221222
Q ss_pred H--HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHH
Q 020633 109 K--VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAAT 144 (323)
Q Consensus 109 ~--~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a 144 (323)
+ ....+.+-|... +.++.++.|+|.|.|+.-.
T Consensus 199 QqLAl~WV~~Ni~aF----GGnp~~vTLFGESAGaASv 232 (601)
T KOG4389|consen 199 QQLALQWVQENIAAF----GGNPSRVTLFGESAGAASV 232 (601)
T ss_pred HHHHHHHHHHhHHHh----CCCcceEEEeccccchhhh
Confidence 2 123333333333 3457799999999998644
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=90.04 E-value=11 Score=32.10 Aligned_cols=118 Identities=14% Similarity=0.043 Sum_probs=70.9
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh-HHHhhcH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM-EKVAASS 114 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~d~ 114 (323)
...+ .+.|+ +.|++ -+.|..|+.-|+-..-++.-..+++.|..- -.+.-|.|--|.+--.-.. .+ +...+-+
T Consensus 272 D~~reEi~yY-FnPGD-~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~P--fLL~~DpRleGGaFYlGs~--eyE~~I~~~I 345 (511)
T TIGR03712 272 DSKRQEFIYY-FNPGD-FKPPLNVYFSGYRPAEGFEGYFMMKRLGAP--FLLIGDPRLEGGAFYLGSD--EYEQGIINVI 345 (511)
T ss_pred cCCCCeeEEe-cCCcC-CCCCeEEeeccCcccCcchhHHHHHhcCCC--eEEeeccccccceeeeCcH--HHHHHHHHHH
Confidence 3344 55443 33433 456788999998754332222345555321 2455588866665321111 12 3344555
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+.+++|+-+ ...++|-|-|||..-|+.++++.. ..++|+.-|...
T Consensus 346 ~~~L~~LgF~----~~qLILSGlSMGTfgAlYYga~l~---P~AIiVgKPL~N 391 (511)
T TIGR03712 346 QEKLDYLGFD----HDQLILSGLSMGTFGALYYGAKLS---PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHhCCC----HHHeeeccccccchhhhhhcccCC---CceEEEcCcccc
Confidence 6666666655 568999999999999999998854 347777776654
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=89.99 E-value=3.6 Score=32.52 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=51.0
Q ss_pred ceEEEEecCCCCCcccc-----HHHHHHHH-hhCCcEEEEecCCCCcCC--------CCCcccC--CCh-HHHhhcHHHH
Q 020633 55 KATVYMTHGYGSDTGWM-----FQKICISF-ATWGYAVFAADLLGHGRS--------DGIRCYL--GDM-EKVAASSLSF 117 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~-----~~~~~~~l-~~~g~~v~~~d~~G~G~s--------~~~~~~~--~~~-~~~~~d~~~~ 117 (323)
|..|||+=|.+.+.... -..+.+.+ ...+-..+++=.+|-|.. ....... ..+ ....+.+...
T Consensus 1 k~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 1 KRIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred CcEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 35778888877543211 23344445 222334455566777771 1100000 000 1223344444
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
...+...+. ...+|.++|+|-|+.+|-.++..
T Consensus 81 y~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 81 YRFLSKNYE-PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHhccC-CcceEEEEecCccHHHHHHHHHH
Confidence 555544432 25689999999999999988865
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=89.46 E-value=4.1 Score=26.32 Aligned_cols=84 Identities=12% Similarity=-0.012 Sum_probs=49.5
Q ss_pred cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhH--HHHHHHh
Q 020633 71 MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGG--AATMLMY 148 (323)
Q Consensus 71 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg--~~a~~~a 148 (323)
.|..+.+.+..+||-.=.+.++..|.+....-.....+. =...|+.+....+ ..+++++|-|--. -+-..+|
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~----K~~~i~~i~~~fP--~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEH----KRDNIERILRDFP--ERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhH----HHHHHHHHHHHCC--CCcEEEEeeCCCcCHHHHHHHH
Confidence 556667777677887777777777554321111001111 2233334444444 6699999999544 3344567
Q ss_pred hhcCCCceeEEEE
Q 020633 149 FQSEPNTWTGLIF 161 (323)
Q Consensus 149 ~~~p~~~v~~~vl 161 (323)
.++|++ |.++.+
T Consensus 86 ~~~P~~-i~ai~I 97 (100)
T PF09949_consen 86 RRFPGR-ILAIYI 97 (100)
T ss_pred HHCCCC-EEEEEE
Confidence 789999 888754
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=88.51 E-value=1.2 Score=38.25 Aligned_cols=66 Identities=23% Similarity=0.276 Sum_probs=49.1
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcC----CC------CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKAS----SA------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
-.-.+++.||..|.++|+....++++++. .. -.++..+||.+|+.--.-+. .-..+..|.+|+++-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~--~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPD--PFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCC--CCCHHHHHHHHHhCC
Confidence 35689999999999999988887777652 11 24688889999998733222 224888999999854
|
It also includes several bacterial homologues of unknown function. |
| >COG3673 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.34 E-value=13 Score=29.70 Aligned_cols=97 Identities=12% Similarity=-0.025 Sum_probs=57.4
Q ss_pred CcceEEEEecCCCCC----ccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCc----------ccCCC--hHHHhhcHH
Q 020633 53 KVKATVYMTHGYGSD----TGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIR----------CYLGD--MEKVAASSL 115 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~----------~~~~~--~~~~~~d~~ 115 (323)
..+..|+|+-|.... ....--.+...|.. .+..++++--+|.|.-.-.. ....+ -..+...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 457788888886422 11122234455544 57888888778887653110 00000 012234455
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+...|...+. .+++|+++|+|-|+.+|--+|..
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 55555555543 26689999999999999888776
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.61 E-value=15 Score=41.20 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=63.9
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
.+.+++.|...+... .+..+...+.. +..++.+..++.-... . ...+++.++....+.+.+... ..+..+
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~-~~~~~~l~~~~~~~d~-~--~~~~~~~~~~~y~~~~~~~~~-----~~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEG-DRHVLGLTCRHLLDDG-W--QDTSLQAMAVQYADYILWQQA-----KGPYGL 3761 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCC-CCcEEEEecccccccc-C--CccchHHHHHHHHHHHHHhcc-----CCCeee
Confidence 456999999887655 67777777754 4788888776542211 1 122566666666666666553 347899
Q ss_pred EEechhHHHHHHHhhh---cCCCceeEEEEc
Q 020633 135 FGESMGGAATMLMYFQ---SEPNTWTGLIFS 162 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~ 162 (323)
.|+|+||.++..++.. ..+. +..+.++
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~-~~~~~~~ 3791 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGES-EAFLGLF 3791 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCc-eeEEEEE
Confidence 9999999999887765 2333 5555444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 323 | ||||
| 3jwe_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase In | 5e-22 | ||
| 3hju_A | 342 | Crystal Structure Of Human Monoglyceride Lipase Len | 6e-22 | ||
| 3pe6_A | 303 | Crystal Structure Of A Soluble Form Of Human Mgll I | 1e-21 | ||
| 3jw8_A | 320 | Crystal Structure Of Human Mono-Glyceride Lipase Le | 2e-21 | ||
| 3qit_A | 286 | Thioesterase Domain From Curacin Biosynthetic Pathw | 3e-05 | ||
| 1a88_A | 275 | Chloroperoxidase L Length = 275 | 4e-04 |
| >pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In Complex With Sar629 Length = 320 | Back alignment and structure |
|
| >pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase Length = 342 | Back alignment and structure |
|
| >pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In Complex With An Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase Length = 320 | Back alignment and structure |
|
| >pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway Length = 286 | Back alignment and structure |
|
| >pdb|1A88|A Chain A, Chloroperoxidase L Length = 275 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 279 bits (717), Expect = 7e-94
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 13/309 (4%)
Query: 17 MPEEEYY--TSQGV-RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF 72
MPEE T Q + + +G LF + + P KA ++++HG G +G +
Sbjct: 1 MPEESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWAP-TGTPKALIFVSHGAGEHSGR-Y 58
Query: 73 QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132
+++ VFA D +GHG+S+G R + D L ++ + Y LP
Sbjct: 59 EELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQ--KDYPGLPV 116
Query: 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192
FL G SMGGA ++ P + G++ +PL + + +L +
Sbjct: 117 FLLGHSMGGAIA-ILTAAERPGHFAGMVLISPLVLANPESAT-TFKVLAAKVLNSVLPNL 174
Query: 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252
++ P + V ++ ++ + S+P +V ++ ++ K+TVPFL
Sbjct: 175 SSGPIDSSV--LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFL 232
Query: 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
+ G+AD + + LL E A S DK++KIY+G YH + E E N V ++ W+
Sbjct: 233 LLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV-LHKELPEVTNSVFHEINMWVS 291
Query: 313 ERVERYGPK 321
+R G
Sbjct: 292 QRTATAGTA 300
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 281 bits (720), Expect = 1e-93
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 14/322 (4%)
Query: 3 PETQTETPPNFWGDMPEEEYYTSQGV-RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYM 60
P T Q + + +G LF + + P KA +++
Sbjct: 10 HGAGDRGPEFPE---ESSPRRTPQSIPYQDLPHLVNADGQYLFCRYWKP-TGTPKALIFV 65
Query: 61 THGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
+HG G +G ++++ VFA D +GHG+S+G R + D L
Sbjct: 66 SHGAGEHSGR-YEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDS 124
Query: 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180
++ + Y LP FL G SMGGA ++ P + G++ +PL + +
Sbjct: 125 MQ--KDYPGLPVFLLGHSMGGAIA-ILTAAERPGHFAGMVLISPLVLANPESAT-TFKVL 180
Query: 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240
+L + + P + V ++ ++ + S+P +V ++ +
Sbjct: 181 AAKVLNLVLPNLSLGPIDSSV--LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRV 238
Query: 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENA 300
+ K+TVPFL + G+AD + + LL E A S DK++KIY+G YH + E E
Sbjct: 239 ERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV-LHKELPEVT 297
Query: 301 NLVLKDMREWIDERVERYGPKN 322
N V ++ W+ +R G +
Sbjct: 298 NSVFHEINMWVSQRTATAGTAS 319
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-37
Identities = 52/300 (17%), Positives = 101/300 (33%), Gaps = 33/300 (11%)
Query: 15 GDMPEEEYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK 74
G +++S V G E + F + V + HG+ T +
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMSEQYPVLSGAEPFYA--ENGPVGVLLVHGFT-GTPHSMRP 58
Query: 75 ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134
+ ++A GY V L GHG AS + ++ R F+
Sbjct: 59 LAEAYAKAGYTVCLPRLKGHGTHYE-DMERTTFHDWVASVEEGYGWLKQ----RCQTIFV 113
Query: 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194
G SMGG T L + P+ + +A + + + G+
Sbjct: 114 TGLSMGGTLT-LYLAEHHPDICGIVPINAAVDI--------------PAIAAGMTGGGEL 158
Query: 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254
+G +K+P+ Y P ++ ++AR+ + ++ P L
Sbjct: 159 PRYLDSIGSDLKNPDV------KELAYEKTP-TASLLQLARLMAQTKAKLDRIVCPALIF 211
Query: 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314
D V P ++ ++++ SS +K I YH D + ++++ E+ +
Sbjct: 212 VSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATL---DYDQPMIIERSLEFFAKH 268
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-34
Identities = 41/267 (15%), Positives = 89/267 (33%), Gaps = 37/267 (13%)
Query: 52 QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL-GDMEKV 110
+ V + H Y + + + GY V+ GHG + + G+ +
Sbjct: 19 EGTDTGVVLLHAYT-GSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIW 77
Query: 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170
A S + H+ + F+FG S+GG + ++ P G +FS+P+
Sbjct: 78 WAESSAAVAHMTA----KYAKVFVFGLSLGGIFA-MKALETLPGITAGGVFSSPILPGKH 132
Query: 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTM 230
++ P A+ + K E +++A P + +
Sbjct: 133 HLVP---------GFLKYAEYMNRLAG--------KSDESTQILAYLPGQ---------L 166
Query: 231 REIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK-ASSADKSIKIYDGMYH 289
I + + + + V P D + + L + ++A YD H
Sbjct: 167 AAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKH 226
Query: 290 SLIQGEPDENANLVLKDMREWIDERVE 316
+ + + + +D+ ++ + E
Sbjct: 227 VITV---NSAHHALEEDVIAFMQQENE 250
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-33
Identities = 39/261 (14%), Positives = 92/261 (35%), Gaps = 34/261 (13%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG--DMEKVAA 112
+ V + HG+ + + + GY A GHG + G D +
Sbjct: 16 ERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVM 74
Query: 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172
+ F K+ + E + G S+GG ++ + + + AP+++ E
Sbjct: 75 NGYEFLKN-KGYEKI-----AVAGLSLGGVFSLKLGYTVPIEG--IVTMCAPMYIKSEET 126
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
+ + ++ + + I ++ P + T++
Sbjct: 127 MYEGVLEYAREYK-------------------KREGKSEEQIEQEMEKFKQTP-MKTLKA 166
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ + ++D+ + P V D + P S+ ++Y + S K IK Y+ H +
Sbjct: 167 LQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVIT 226
Query: 293 QGEPDENANLVLKDMREWIDE 313
D+ + + +D+ +++
Sbjct: 227 L---DQEKDQLHEDIYAFLES 244
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 9e-24
Identities = 54/294 (18%), Positives = 102/294 (34%), Gaps = 56/294 (19%)
Query: 32 KKYFETPNG-KLFTQSFLPLDQKVK-ATVYMTHGYGSD-TGWMFQKICISFATWGYAVFA 88
+ +G KL +P + K + HG+ + + G A
Sbjct: 2 GAMYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLR 61
Query: 89 ADLLGHGRSDG------IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA 142
AD+ GHG+SDG + +L ++ V + + + ++ G S GG
Sbjct: 62 ADMYGHGKSDGKFEDHTLFKWLTNILAVV-------DYAKK-LDFVT-DIYMAGHSQGGL 112
Query: 143 ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVG 202
+ +++ E + LI +P +IPE + +L + + D A K+ G
Sbjct: 113 S-VMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPE-NIPDELDAWDGRKLKG 170
Query: 203 KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
++ + ++V D K T P L VHG D
Sbjct: 171 NYVRVAQTIRVE---------------------------DFVDKYTKPVLIVHGDQD-EA 202
Query: 263 CPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
P S ++ + + G H D + LV + ++E++ E++
Sbjct: 203 VPYEASVAFSKQYK--NCKLVTIPGDTHCY-----DHHLELVTEAVKEFMLEQI 249
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 94.3 bits (234), Expect = 2e-22
Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 33/262 (12%)
Query: 34 YFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90
NG +L P + T+ + G+ + +T G+ VF D
Sbjct: 11 VLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF-AGLAEYLSTNGFHVFRYD 69
Query: 91 LLGH-GRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149
L H G S G M S + + ++ L S+ +
Sbjct: 70 SLHHVGLSSGSIDEFT-MTTGKNSLCTVYHWLQTKGT---QNIGLIAASLSARVAYEVIS 125
Query: 150 QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
E + LI + + + + ++ + L + ++P +++ +
Sbjct: 126 DLELS---FLITAVGVVNLRDTLEKA------------LGFDYLSLPIDELPNDLDFEGH 170
Query: 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
KL + + + + +VP + D
Sbjct: 171 KL-----GSEVFVRDCFEHHWDTLDSTLDKV----ANTSVPLIAFTANNDDWVKQEEVYD 221
Query: 270 LYEKASSADKSIKIYDGMYHSL 291
+ + + G H L
Sbjct: 222 MLAHIRTGHCKLYSLLGSSHDL 243
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 90.3 bits (224), Expect = 3e-21
Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 40/264 (15%)
Query: 51 DQKVKATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
++ + HG+ ++ + ++I S A D GHG SDG + + +
Sbjct: 42 FGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNE 101
Query: 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169
+ + + +V+ R++ +L G + GG M P+ ++ AP +
Sbjct: 102 IED-ANAILNYVKTDPHVRNI--YLVGHAQGGVV-ASMLAGLYPDLIKKVVLLAPAATLK 157
Query: 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGT 229
+ + G G+ +PD L++ P
Sbjct: 158 GD--------ALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLP----------- 198
Query: 230 MREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289
I + ++ T P +HGT D V P +SK + + ++ + +G H
Sbjct: 199 ----------IYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQI--YQNSTLHLIEGADH 246
Query: 290 SLIQGEPDENANLVLKDMREWIDE 313
+ +++
Sbjct: 247 CFSDSYQKN----AVNLTTDFLQN 266
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 2e-14
Identities = 35/269 (13%), Positives = 67/269 (24%), Gaps = 50/269 (18%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106
+P V M G S FQ + G A D G G + GD
Sbjct: 144 RIPEGPGPHPAVIMLGGLESTKEESFQ-MENLVLDRGMATATFDGPGQGEMFEYKRIAGD 202
Query: 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL- 165
EK ++ + + + G S+GG + EP + +
Sbjct: 203 YEKYTSAVVDLLTKLEAIRNDA---IGVLGRSLGGNYALKSAAC-EPRLAACISWGGFSD 258
Query: 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKP 225
+ P + Y + + +L V +
Sbjct: 259 LDYWDLETPLTKESWKY-----------------VSKVDTLEEARLHVH----AALETRD 297
Query: 226 RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
+ ++ P +HG D V + + E + ++ +
Sbjct: 298 VLS-----------------QIACPTYILHGVHDEV-PLSFVDTVLELVPAEHLNLVVEK 339
Query: 286 GMYHSLIQGEPDENANLVLKDMREWIDER 314
H +M +W+ +
Sbjct: 340 DGDHCCH-----NLGIRPRLEMADWLYDV 363
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 69.7 bits (170), Expect = 2e-13
Identities = 49/288 (17%), Positives = 86/288 (29%), Gaps = 50/288 (17%)
Query: 35 FETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH 94
GK+ L K V ++ G S M++ A A+ D+
Sbjct: 173 IPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSV 232
Query: 95 GRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGG-AATMLMYFQSEP 153
G S D ++ + L+ + + +R L G GG A L + E
Sbjct: 233 GYSSKYP-LTEDYSRLHQAVLNELFSIPYVDHHRV---GLIGFRFGGNAMVRLSFL--EQ 286
Query: 154 NTWTGLIFSAP----LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
+ +F P+ ++ + D A+ +GK++ D
Sbjct: 287 EKIKACVILGAPIHDIFASPQKLQ---------QMPKMYLDVLAS-----RLGKSVVDIY 332
Query: 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
L G M + Q + K VP L + D V P S
Sbjct: 333 SLS---------------GQMAAWSLKVQGFLSS-RKTKVPILAMSLEGDPV-SPYSDNQ 375
Query: 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
+ S+ K+ KI + L +W+++ + R
Sbjct: 376 MVAFFSTYGKAKKISSKTIT--------QGYEQSLDLAIKWLEDELLR 415
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 63.9 bits (155), Expect = 1e-11
Identities = 37/270 (13%), Positives = 90/270 (33%), Gaps = 22/270 (8%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106
+ + K + T+ + G + +F + S Y V DL G G++ +
Sbjct: 151 AIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEV 210
Query: 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
+ A S++ + + + G S GG T + + A
Sbjct: 211 DARAAISAILDWYQAPTEKIA------IAGFSGGGYFT-AQAVEKDKR------IKA--- 254
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
I +F L + + ++ ++ + ++
Sbjct: 255 WIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKY-AWQFGQVDF 313
Query: 227 VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA--DKSIKIY 284
+ ++ E+ Q +++K+ VP L + G + S++LY+ D +++ +
Sbjct: 314 ITSVNEVLE--QAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKF 371
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWIDER 314
+ + + N L+ + EW++
Sbjct: 372 SSESGADAHCQVN-NFRLMHYQVFEWLNHI 400
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 62.4 bits (151), Expect = 2e-11
Identities = 42/266 (15%), Positives = 77/266 (28%), Gaps = 31/266 (11%)
Query: 51 DQKVKATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
Q + T GY SD TG ++ A+ G D GHG S G G + +
Sbjct: 33 AQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGG-AFRDGTISR 91
Query: 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169
+L+ H + E + + G L P +G++ AP
Sbjct: 92 WLEEALAVLDHFK-PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFT 150
Query: 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGT 229
++ ++G + Y+ +P + T
Sbjct: 151 SDL------------------------IEPLLGDRERAELAENGYFEEVSEYSPEPNIFT 186
Query: 230 MREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288
+ + P + G AD + L E + D + +
Sbjct: 187 RALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGD 246
Query: 289 HSLIQGEPDENANLVLKDMREWIDER 314
H L ++ + + +R I+ R
Sbjct: 247 HRL---SRPQDIDRMRNAIRAMIEPR 269
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-11
Identities = 41/267 (15%), Positives = 95/267 (35%), Gaps = 39/267 (14%)
Query: 51 DQKVKATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
++K T+ HG G + + + Y DL GHG S G +
Sbjct: 12 NKKSPNTLLFVHGSGCNLKIFGEL---EKYLE-DYNCILLDLKGHGESKGQCPS--TVYG 65
Query: 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLF 166
+ +F + ++ +++ L G SMGGA + + + ++ A
Sbjct: 66 YIDNVANFITNSEVTKHQKNI--TLIGYSMGGAIVLGVALKK-LPNVRKVVSLSGGARFD 122
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ ++ FM + D + + + + + + + +P
Sbjct: 123 KLDKD--------FMEKIYHNQLDNNYLLECIGGIDNPLSE-KYFETLEKDPD------- 166
Query: 227 VGTMREIARVCQY--IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284
M C+ + DN + +P + + +T S+++ ++ ++ +KI+
Sbjct: 167 --IMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS--ELKIF 222
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWI 311
+ H L NA V ++++ +I
Sbjct: 223 ETGKHFL----LVVNAKGVAEEIKNFI 245
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 1e-10
Identities = 49/319 (15%), Positives = 86/319 (26%), Gaps = 57/319 (17%)
Query: 49 PLDQKVKATVYMTHGYGSDTGW---MFQKICISFATWGY---AVFAADLLGHGRSD---- 98
+ + HG G ++ + A Y V D + HG S
Sbjct: 46 RSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNR 105
Query: 99 ---GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNT 155
G D A L S + G SMGG + +PN
Sbjct: 106 GRLGTNFNWIDG---ARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVL-QPNL 161
Query: 156 WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA----------DTWAAMPD------NK 199
+ LI P+ + + + + L D +A + N
Sbjct: 162 FHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNG 221
Query: 200 MVGKAIKDPEKLK------VIASNPRRYTGKPRVGTMREIARVCQY---------IQDNF 244
+ L+ ++ G P M + + Y + N
Sbjct: 222 SFFTNA-HSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNV 280
Query: 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-PDENANLV 303
V + + G P + L + + + + G H L+ E PD V
Sbjct: 281 KFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNY--HLDVIPGGSH-LVNVEAPDL----V 333
Query: 304 LKDMREWIDERVERYGPKN 322
++ + I E V ++
Sbjct: 334 IERINHHIHEFVLTSPLQS 352
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 2e-10
Identities = 44/271 (16%), Positives = 77/271 (28%), Gaps = 67/271 (24%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG------IRCYLGDME 108
KA + HG + + +A G+ + A D HG +G Y+ ++
Sbjct: 24 KALLLALHGLQGSKEHILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 109 KVAASSLSFFKHVRDSEPYRD-LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167
+VA + V + R LP FL G S+G + L F F
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGA-FVAHLLLAEGFRPRGVLAFIGSGF- 140
Query: 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
+P G+ ++DP L + + P
Sbjct: 141 ------------------------PMKLPQ----GQVVEDPGVLALYQAPPATRGEA--- 169
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK----I 283
V +HG+ D + + E + +
Sbjct: 170 -----YGGVPLLH-------------LHGSRDHIVPLARMEKTLEALRPHYPEGRLARFV 211
Query: 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314
+G H+L A + L + W++ R
Sbjct: 212 EEGAGHTL----TPLMARVGLAFLEHWLEAR 238
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 7e-10
Identities = 34/266 (12%), Positives = 69/266 (25%), Gaps = 21/266 (7%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
+ HG D +S Y DL G G SD I +
Sbjct: 23 PIIFLHGLSLDKQSTCLFFEPLSNVG-QYQRIYLDLPGMGNSDPISPS-TSDNVLETLIE 80
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENM 172
+ + + F L+G S GG + F + G+ + +
Sbjct: 81 AIEEII-------GARRFILYGHSYGGYLAQAIAFHL-KDQTLGVFLTCPVITADHSKRL 132
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
+++ + + A + V + + + + K + ++
Sbjct: 133 TGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQN 192
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ PF + G D V L + I + + H+L
Sbjct: 193 NYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENG--EIVLLNRTGHNL- 249
Query: 293 QGEPDENANLVLKDMREWIDERVERY 318
+ V ++D +
Sbjct: 250 ---MIDQREAVGFHFDLFLD-ELNSN 271
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 3e-09
Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 21/189 (11%)
Query: 33 KYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADL 91
++ + ++F + + + ++ + HGY W + +++ GY V+A D
Sbjct: 7 EFIDVNGTRVFQRKMVT--DSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDY 64
Query: 92 LGHGRSDGIRCY---LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA---ATM 145
G GRS Y GD++ A + K + + G SMGG T
Sbjct: 65 PGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARS------VIMGASMGGGMVIMTT 118
Query: 146 LMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205
L Y P+ G+I AP +V K+ L++G D + +K I
Sbjct: 119 LQY----PDIVDGIIAVAPAWVESLKGDMKKIRQKTL-LVWGSKDHVVPIALSKEYASII 173
Query: 206 KDPEKLKVI 214
+L+++
Sbjct: 174 SG-SRLEIV 181
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 56.1 bits (134), Expect = 4e-09
Identities = 45/292 (15%), Positives = 86/292 (29%), Gaps = 49/292 (16%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG------DMEKVAASSL 115
+G + I + A G+ V+ D H ++ +
Sbjct: 72 NGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIK 131
Query: 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLF--VIPEN 171
++ + +L GES GG A + N GLI P + P+
Sbjct: 132 EVVSFIKRDSGQERI--YLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKF 189
Query: 172 MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP------EKLKVI----------- 214
P + P+N + A+ +P K K I
Sbjct: 190 YTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVT 249
Query: 215 -ASNPRRYTGKPRVGTMREIARVCQY----------IQDNFSKVTVPFLTVHGTADGVTC 263
++NP Y + +A Y ++ ++ + VP + G+
Sbjct: 250 GSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQI 309
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYH-SLIQGEPDENANLVLKDMREWIDER 314
S L ++ I + G H + GE + V + +W+ ++
Sbjct: 310 FDSKIL------PSNSEIILLKGYGHLDVYTGE--NSEKDVNSVVLKWLSQQ 353
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 9e-09
Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 59/265 (22%)
Query: 57 TVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113
V HG+G + ++ G DL GH +R + +
Sbjct: 30 GVLFVHGWGGSQHHSLVRARE----AVGLGCICMTFDLRGHEGYASMRQSV-TRAQNLDD 84
Query: 114 SLSFFKHVRDSEPYRDLPG--FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN 171
+ + + S PY D + G S GG + L+ + L +P +
Sbjct: 85 IKAAYDQLA-SLPYVD-AHSIAVVGLSYGGYLSALLTRERPVE---WLALRSPALYKDAH 139
Query: 172 MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR 231
K+ L L A DN
Sbjct: 140 WDQPKVSLNADPDLMDYRRRALAPGDN--------------------------------L 167
Query: 232 EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK-IYDGMYHS 290
+A ++ L V D + + + ++A + G H+
Sbjct: 168 ALAAC--------AQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHA 219
Query: 291 LIQGEPDENANLVLKDMREWIDERV 315
L E+ + + +W+ E V
Sbjct: 220 L---SVKEHQQEYTRALIDWLTEMV 241
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 9e-09
Identities = 45/210 (21%), Positives = 73/210 (34%), Gaps = 28/210 (13%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY-LGDM-EKVAASSLSFFK 119
HG+G + +++ I ++ + + DL G GRS G L DM E V +
Sbjct: 20 HGWGLN-AEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPD--- 74
Query: 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPEN---MKP 174
G S+GG + P L+ S+P F + +KP
Sbjct: 75 -----------KAIWLGWSLGGLVASQIALTH-PERVRALVTVASSPCFSARDEWPGIKP 122
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVG--KAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
L F L T + +G A +D LK G +
Sbjct: 123 DVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEI 182
Query: 233 IARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ V ++ V++PFL ++G DG+
Sbjct: 183 LKTV--DLRQPLQNVSMPFLRLYGYLDGLV 210
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 2e-08
Identities = 42/288 (14%), Positives = 83/288 (28%), Gaps = 28/288 (9%)
Query: 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS-DTGWMFQKICISFATWGYAVFAAD 90
K+ T G ++T ++ G G T F I + D
Sbjct: 23 KEMVNTLLGPIYTCH-----REGNPCFVFLSGAGFFSTADNFANIIDKLPD-SIGILTID 76
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150
G S + + L F+H + Y L S+GG A + + Q
Sbjct: 77 APNSGYSPVSNQANVGLRDWVNAILMIFEHF-KFQSY-----LLCVHSIGGFAALQIMNQ 130
Query: 151 SEPNTWTGLIFSAP-LFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209
S G I P +I S L+ + L + K + ++ +
Sbjct: 131 S-SKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQ 189
Query: 210 KLKVIAS----NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265
+ K + R+ + + + + +P + +
Sbjct: 190 QFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESFR-----E 244
Query: 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
L E + ++ I G +H L E + +L+ + + +
Sbjct: 245 KEYLESEYLNKHTQTKLILCGQHHYLHWSETNS----ILEKVEQLLSN 288
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 5e-08
Identities = 46/270 (17%), Positives = 87/270 (32%), Gaps = 29/270 (10%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
V HG+ + G +Q + GY A D GHG S Y D + A
Sbjct: 21 PVVFIHGWPLN-GDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGY--DFDTFADDLN 77
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVI--- 168
+ DL L SMGG + + P+ +
Sbjct: 78 DLLTDL-------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDK 130
Query: 169 -PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
P+ + G+L + W + + + +
Sbjct: 131 NPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIE 190
Query: 228 GTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCP-TSSKLLYEKASSADKSIKIYD 285
G +R + ++ K +P L VHG D V + + + +A +K+Y+
Sbjct: 191 GGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNA--ELKVYE 248
Query: 286 GMYHS--LIQGEPDENANLVLKDMREWIDE 313
G H ++ G+ ++ +D+ E++++
Sbjct: 249 GSSHGIAMVPGDKEK----FNRDLLEFLNK 274
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 6e-08
Identities = 53/267 (19%), Positives = 83/267 (31%), Gaps = 26/267 (9%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
+ +HG+ + ++ I A GY V A D GHGRS DM+ A
Sbjct: 21 PIVFSHGWPLN-ADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGN--DMDTYADDLA 77
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVI--- 168
+H+ DL LFG S GG + PL +
Sbjct: 78 QLIEHL-------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEA 130
Query: 169 -PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGK-PR 226
P + L + + + G + +
Sbjct: 131 NPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH 190
Query: 227 VGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
I + ++ K+ VP L VHG AD V P + + A ++KIY
Sbjct: 191 KNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQV-VPIEASGIASAALVKGSTLKIYS 249
Query: 286 GMYHSLIQGEPDENANLVLKDMREWID 312
G H L D + + + D+ +I
Sbjct: 250 GAPHGL----TDTHKDQLNADLLAFIK 272
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 6e-08
Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 23/216 (10%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
T+ + HG +++ A GY V A D +G +S Y +++AA++ +
Sbjct: 48 TILLMHGKNFC-AGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHA 106
Query: 117 FFKHVRDSEPYRDLPGF-LFGESMGGA---ATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172
+ + + + G SMGG L+Y P L+ P+ +
Sbjct: 107 LLERL-------GVARASVIGHSMGGMLATRYALLY----PRQVERLVLVNPIGLEDWKA 155
Query: 173 KPSKLHLFMYGLLFGLADTWAAMPD----NKMVGKAIKDPEKLKVIASNPRRYTGKPRVG 228
L + + G+ + ++ + + R G+ V
Sbjct: 156 LGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVA 215
Query: 229 TMREIARVCQYIQD---NFSKVTVPFLTVHGTADGV 261
+ + Q ++ +P L + G D
Sbjct: 216 WNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNT 251
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 1e-07
Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 17/187 (9%)
Query: 25 SQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMFQKICISFATWG 83
+ V + + LF + LP + + +V + HG W A G
Sbjct: 2 AASVEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAG 61
Query: 84 YAVFAADLLGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA 142
Y A DL G G S + + + P + S+ G
Sbjct: 62 YRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPP------VVISPSLSGM 115
Query: 143 ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW--------AA 194
++ + G + AP+ N +++G D
Sbjct: 116 YSLPFLTAP-GSQLPGFVPVAPICTDKINAANYASVKTPALIVYGDQDPMGQTSFEHLKQ 174
Query: 195 MPDNKMV 201
+P+++++
Sbjct: 175 LPNHRVL 181
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 35/222 (15%), Positives = 61/222 (27%), Gaps = 20/222 (9%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ HG+ SD + F Y V DL GHG + + +
Sbjct: 18 VLVFLHGFLSD-SRTYHNHIEKFTD-NYHVITIDLPGHGEDQSSMDETWNFDYITTLLDR 75
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENMKP 174
+ LFG SMGG + + LI ++P N
Sbjct: 76 ILDKY-KDKSI-----TLFGYSMGGRVALYYAING-HIPISNLILESTSPGIKEEANQLE 128
Query: 175 SKLH------LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVG 228
+L + + + W +P + E I +
Sbjct: 129 RRLVDDARAKVLDIAGIELFVNDWEKLPL--FQSQLELPVEIQHQIRQQRLSQSPHKMAK 186
Query: 229 TMREIARVCQ-YIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269
+R+ + ++ VP L + G D + K+
Sbjct: 187 ALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKM 228
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 35/216 (16%), Positives = 60/216 (27%), Gaps = 16/216 (7%)
Query: 58 VYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117
V + G S + A + V D G G S Y +E+ +
Sbjct: 26 VVLVGGALST-RAGGAPLAERLAP-HFTVICYDRRGRGDSGDTPPY--AVEREIEDLAAI 81
Query: 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
F+FG S G ++L P T +F P V
Sbjct: 82 IDAA-------GGAAFVFGMSSGAGLSLLAAASGLPIT-RLAVFEPPYAVDDSRPPVPPD 133
Query: 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC 237
+ L A+ M P+ + + P + T+ V
Sbjct: 134 YQTRLDALLAEGRRGDAVTYF-MTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVM 192
Query: 238 ---QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
F+ +++P L + G A +++ L
Sbjct: 193 GDNTIPTARFASISIPTLVMDGGASPAWIRHTAQEL 228
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 1e-07
Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 55 KATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGI---RCYLGDMEKV 110
V HG GS + + G A DLL + R D+ +
Sbjct: 35 TGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLL 94
Query: 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161
A+ + + + + L FG S GG A L+ P T ++
Sbjct: 95 ASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAA-LVAAAERPETVQAVVS 144
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 42/269 (15%), Positives = 80/269 (29%), Gaps = 37/269 (13%)
Query: 60 MTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118
+TH Y + T Y+V+ +L G G SD + S S
Sbjct: 28 VTHLYSEYNDNGNTF---ANPFTDHYSVYLVNLKGCGNSDSAKND---------SEYSMT 75
Query: 119 KHVRDSEPYRDLPGF----LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ ++D E R+ G S GG ++ Y + T +I
Sbjct: 76 ETIKDLEAIREALYINKWGFAGHSAGGMLALV-YATEAQESLTKIIVGGAAASKEYASHK 134
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK------------DPEKLK-VIASNPRRY 221
++ + A+ D+ V + K EKL+ +
Sbjct: 135 DSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGK 194
Query: 222 TGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI 281
T R+ R++ ++ V +P G D S + +A +
Sbjct: 195 TVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNAT--L 252
Query: 282 KIYDGMYHSLIQGEPDENANLVLKDMREW 310
++ H+ E D+ + + +
Sbjct: 253 TKFEESNHNPFVEEIDK----FNQFVNDT 277
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 44/269 (16%), Positives = 82/269 (30%), Gaps = 28/269 (10%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
V + HG+ G ++ + GY V D G G+S Y + + +
Sbjct: 29 PVVLIHGWPLS-GRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGY--EYDTFTSDLH 85
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVIPEN 171
+ + +L L G SMGG + ++F P E+
Sbjct: 86 QLLEQL-------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSED 138
Query: 172 -----MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ + + F G++ D N G
Sbjct: 139 HPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASP 198
Query: 227 VGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCP-TSSKLLYEKASSADKSIKIY 284
GT+ I + + + K +P L +HG +D S KL +E ++ + +
Sbjct: 199 KGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNS--KVALI 256
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313
G H L E + + ++ +
Sbjct: 257 KGGPHGLNATHAKE----FNEALLLFLKD 281
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 38/211 (18%), Positives = 61/211 (28%), Gaps = 20/211 (9%)
Query: 62 HGYGSD-TGWM-FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
HG G TGW F + GY V D G G+SD + + A S
Sbjct: 43 HGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVD 102
Query: 120 HVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178
+ D+ L G SMGG +++ + P L+ P
Sbjct: 103 QL-------DIAKIHLLGNSMGGHSSVAFTLKW-PERVGKLVLMGGGTGGMSLFTPMPTE 154
Query: 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-------KVIASNPRRYTGKPRVGTMR 231
T + M+ + D L ++ RR + V ++
Sbjct: 155 GIKRLNQLYRQPTIENLK--LMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLE 212
Query: 232 EIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ +++ L V G D
Sbjct: 213 ANPKQFPDFGPRLAEIKAQTLIVWGRNDRFV 243
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 8e-07
Identities = 16/113 (14%), Positives = 27/113 (23%), Gaps = 10/113 (8%)
Query: 55 KATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113
+ + HG+ S + G+ D + GD+
Sbjct: 4 RGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQL-GDVRGRLQR 62
Query: 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
L + + P L G S+G + S L P
Sbjct: 63 LLEIARAATEKGPV-----VLAGSSLGSYIAAQV---SLQVPTRALFLMVPPT 107
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 34/221 (15%), Positives = 63/221 (28%), Gaps = 20/221 (9%)
Query: 62 HGYGSD-TGW-MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119
HG G GW + + F GY V D G +SD + A +
Sbjct: 40 HGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMD 99
Query: 120 HVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178
+ D+ L G +MGGA + + P+ LI P + P P +
Sbjct: 100 AL-------DIDRAHLVGNAMGGATALNFALEY-PDRIGKLILMGPGGLGPSMFAPMPME 151
Query: 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-------KVIASNPRRYTGKPRVGTMR 231
++ + +M+ + D + + A + K + + +
Sbjct: 152 GIKLLFKLYAEPSYETL--KQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQ 209
Query: 232 EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272
+ + ++ G D L
Sbjct: 210 KAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLW 250
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 2e-06
Identities = 41/312 (13%), Positives = 75/312 (24%), Gaps = 33/312 (10%)
Query: 3 PETQTETPPNFWGDMPEEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVK--ATVY 59
T ++ + S V + K F G L +LP ++ +
Sbjct: 41 SNTGGTNMQLQLTQEWDKTFPLSAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIV 100
Query: 60 MTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA---SSLS 116
+ +G+ + A G+ A D G S G + + +++
Sbjct: 101 IGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVD 160
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE------PNTWTGLIFSAPLFVIPE 170
F + + R + G G + + +T +
Sbjct: 161 FISLLPEVNRER---IGVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYNDS 217
Query: 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVG-- 228
+ D + P + + Y PR
Sbjct: 218 VTLEQRTRTLEQLGQQRWKDAESGTP--AYQPPYNELKGGEAQFLVDYHDYYMTPRGYHP 275
Query: 229 ---------TMREIARVCQYIQDNFSKV--TVPFLTVHGTADGVTCPTSSKLLYEKASSA 277
TM + K P L +HG S+ Y A +
Sbjct: 276 RAVNSGNAWTMTTPLSFMNMPILTYIKEISPRPILLIHGERAHS--RYFSETAYAAA-AE 332
Query: 278 DKSIKIYDGMYH 289
K + I G H
Sbjct: 333 PKELLIVPGASH 344
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 2e-06
Identities = 31/215 (14%), Positives = 50/215 (23%), Gaps = 36/215 (16%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
G+ D +++ + + V + GHG S + + V
Sbjct: 34 PGWCHD-HRVYKYLIQELDA-DFRVIVPNWRGHGLSP-----------SEVPDFGYQEQV 80
Query: 122 RDSEPYRDLPGF----LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
+D+ D G S GG + + Q+ P I L P+ L
Sbjct: 81 KDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSL 140
Query: 178 HLF-----MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE 232
L GL D W D + + Y + R
Sbjct: 141 TLLKDPERWREGTHGLFDVWLDGHD---------EKRVRHHLLEEMADYGYDCWGRSGRV 191
Query: 233 IARVCQYIQD-----NFSKVTVPFLTVHGTADGVT 262
I T P +
Sbjct: 192 IEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPE 226
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 52/267 (19%), Positives = 84/267 (31%), Gaps = 30/267 (11%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSL 115
V +HG+ D M++ ++ GY A D G GRSD D + A
Sbjct: 21 PVLFSHGWLLD-ADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGN--DYDTFADDIA 77
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVI--- 168
+H+ DL L G SMGG + GL+ PLF
Sbjct: 78 QLIEHL-------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPD 130
Query: 169 -PENMKPSKLHLFMYGLLFGLADTWAAMPD---NKMVGKAIKDPEKLKVIASNPRRYTGK 224
P+ + F LL A + G+ + + K
Sbjct: 131 YPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVV-SQGVQTQTLQIALLASLK 189
Query: 225 PRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284
V + A + +K+ VP L +HG D + P + +K+Y
Sbjct: 190 ATVDCVTAFAETDFR--PDMAKIDVPTLVIHGDGDQI-VPFETTGKVAAELIKGAELKVY 246
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWI 311
H +A + +D+ ++
Sbjct: 247 KDAPHGF----AVTHAQQLNEDLLAFL 269
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 5e-06
Identities = 51/273 (18%), Positives = 88/273 (32%), Gaps = 34/273 (12%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG-DMEKVAASSL 115
V + HGY D G +++ GY V D G G S + G D + AA
Sbjct: 25 PVVLIHGYPLD-GHSWERQTRELLAQGYRVITYDRRGFGGSS--KVNTGYDYDTFAADLH 81
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENM 172
+ + + DL L G SMG + L F S F++ +
Sbjct: 82 TVLETL-------DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDD 134
Query: 173 KPSKLHLFMY-GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR 231
P + ++ G+ A + D I+ + V
Sbjct: 135 NPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGS--WNVAIGS 192
Query: 232 ----EIARVCQYIQD------NFSKVTVPFLTVHGTADGVT-CPTSSKLLYEKASSADKS 280
A V +I+D P L +HGT D + +++ ++ AD
Sbjct: 193 APVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEAD-- 250
Query: 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
+G H L +A+ V ++ ++ +
Sbjct: 251 YVEVEGAPHGL----LWTHADEVNAALKTFLAK 279
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 7e-06
Identities = 47/286 (16%), Positives = 78/286 (27%), Gaps = 54/286 (18%)
Query: 47 FLPLDQKVKA-TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105
+P ++ K V GY G+ + + + GY F D G G
Sbjct: 86 LVPKLEEEKLPCVVQYIGYNGGRGFPHDWL--FWPSMGYICFVMDTRGQGSGWLKGDTPD 143
Query: 106 DMEKVAASSLSFF--KHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSA 163
E F + + D Y F A + S P
Sbjct: 144 YPEGPVDPQYPGFMTRGILDPRTYYYRRVFT------DAVRAVEAAASFP---------- 187
Query: 164 PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTG 223
V E + + G G A +K + D + RR
Sbjct: 188 --QVDQER-------IVIAGGSQGGGIALAVSALSKKAKALLCDV----PFLCHFRRAVQ 234
Query: 224 KPRVGTMREIARVCQYIQD---------------NF-SKVTVPFLTVHGTADGVTCPTSS 267
EI + +D NF ++ +P L G D + P++
Sbjct: 235 LVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTV 294
Query: 268 KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
Y + K I+IY H A +K +++ ++
Sbjct: 295 FAAYNYY-AGPKEIRIYPYNNHEGG---GSFQAVEQVKFLKKLFEK 336
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 7e-06
Identities = 42/227 (18%), Positives = 69/227 (30%), Gaps = 53/227 (23%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI-RCY-LGDMEKVAASSLSFFK 119
GS F + + V A D G+G S R + E+ A ++ K
Sbjct: 31 GMLGSGE-TDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMK 89
Query: 120 HVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178
+ L G S GG T LI +A PS +H
Sbjct: 90 AL-------KFKKVSLLGWSDGGI--------------TALIAAA--------KYPSYIH 120
Query: 179 -LFMYGLLFGLADTWAAMPD-NKMVGKAIKDPEKL------KVIASNPRRYTGKPRVGTM 230
+ + A + D + M+ + I+D K + A Y + +
Sbjct: 121 KMV-------IWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWV 173
Query: 231 REIARVCQYIQDNF-----SKVTVPFLTVHGTADGVTCPTSSKLLYE 272
I + N +V P L VHG D + + +++
Sbjct: 174 DGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHK 220
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 8e-06
Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 26/267 (9%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-GIRCYLGDMEKVAASSLSFFKH 120
HG+ G +++ + GY V D G G+S Y D + AA + +
Sbjct: 31 HGFPLS-GHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY--DYDTFAADLNTVLET 87
Query: 121 VRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF---SAPLFV-IPENMKPS 175
+ DL L G SMG + F P + +N +
Sbjct: 88 L-------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGA 140
Query: 176 KLHLFMYGLLFGLADTWAAMPDN---KMVGKAIKDPEKLK--VIASNPRRYTGKPRVGTM 230
F G++ + A ++ + ++
Sbjct: 141 APQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAA 200
Query: 231 REIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290
+ + ++ VP L +HGT D ++ ++ KA +G H
Sbjct: 201 AAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKA-LPSAEYVEVEGAPHG 259
Query: 291 LIQGEPDENANLVLKDMREWIDERVER 317
L+ +E V + ++ + +E
Sbjct: 260 LLWTHAEE----VNTALLAFLAKALEA 282
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 9e-06
Identities = 22/91 (24%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG G +Q + A A DL GHG + C + +
Sbjct: 18 LVVLVHGLLGS-GADWQPVLSHLARTQCAALTLDLPGHGTNPERHCD--NFAEAVEMIEQ 74
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147
+ SE P L G S+GG M
Sbjct: 75 TVQAHVTSEV----PVILVGYSLGGRLIMHG 101
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 39/224 (17%), Positives = 63/224 (28%), Gaps = 35/224 (15%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
TV + HG G W I+ + V A D G+G SD + A +
Sbjct: 38 TVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALK 97
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
F + L L G ++GG + P L+ P + P
Sbjct: 98 GLFDQL-------GLGRVPLVGNALGGGTAVRFALDY-PARAGRLVLMGPGGLSINLFAP 149
Query: 175 SKLHLFMYGLLFGLADTWAAM--------PDNKMVGKAI--------KDPEKLKVIASNP 218
F +A T + D ++ + PE L +
Sbjct: 150 DPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMG 209
Query: 219 RRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ + G M + ++ P L + G D V
Sbjct: 210 KSFAGADFEAGM---------MWREVYRLRQPVLLIWGREDRVN 244
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 50/278 (17%), Positives = 77/278 (27%), Gaps = 48/278 (17%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD---GIRCYLGDMEKVA 111
+ T HG S ++++K+ F G V A DL G GRSD Y
Sbjct: 46 EHTFLCLHGEPS-WSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY-------- 96
Query: 112 ASSLSFFKHVRDSEPYRDLPGF----LFGESMGGAATMLMYFQSEPNTWTGLIF-SAPLF 166
+F H R + D L + GG L P LI + L
Sbjct: 97 ----TFGFHRRSLLAFLDALQLERVTLVCQDWGGI-LGLTLPVDRPQLVDRLIVMNTALA 151
Query: 167 VIPENMKPSKLH-------------LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213
V K + M + G+ D A D PE
Sbjct: 152 VGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYD-----APFPGPEFKAG 206
Query: 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273
+ P P M Q + ++ + P G D V P +L +
Sbjct: 207 VRRFPAIV---PITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQA 263
Query: 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
+ + + G H + + + +
Sbjct: 264 IRGCPEPMIVEAGG-HFVQEHGEPIARAA----LAAFG 296
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 34/258 (13%), Positives = 70/258 (27%), Gaps = 23/258 (8%)
Query: 62 HGYGSDTGWMFQ-KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120
G G G + +F GY D G G ++ + + + A + + +
Sbjct: 50 AGRGGA-GRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGF--TTQTMVADTAALIET 106
Query: 121 VRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIF--SAPLFVIPENMKP-SK 176
+ D+ + G SMG + P + + + ++
Sbjct: 107 L-------DIAPARVVGVSMGAFIAQELMVV-APELVSSAVLMATRGRLDRARQFFNKAE 158
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236
L+ G+ A K + D + + + K G ++
Sbjct: 159 AELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCA 218
Query: 237 CQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295
Q + + P L + D VT P + + + + H
Sbjct: 219 PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNG--RYLQIPDAGHLG---- 272
Query: 296 PDENANLVLKDMREWIDE 313
E V M ++
Sbjct: 273 FFERPEAVNTAMLKFFAS 290
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 2e-05
Identities = 42/290 (14%), Positives = 68/290 (23%), Gaps = 65/290 (22%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ + G + A G V D GRS
Sbjct: 25 ALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRST------------------ 66
Query: 117 FFKHVRDSEPY------RDLPGFL----------FGESMGGAATMLMYFQSEP------- 153
+ PY D L G SMG T ++
Sbjct: 67 --TRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALD-HHDRLSSLT 123
Query: 154 --NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211
I +P+ L F A P + K K
Sbjct: 124 MLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKW 183
Query: 212 KVIASNPRRY-TGKPRVGTMREIARVCQYIQDNF----------------SKVTVPFLTV 254
++++ + + R I + + + +VTVP L +
Sbjct: 184 RILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVI 243
Query: 255 HGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304
D + K L +A + GM H+L A ++L
Sbjct: 244 QAEHDPIAPAPHGKHLAGLIPTAR--LAEIPGMGHALPSSVHGPLAEVIL 291
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 2e-05
Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 10/160 (6%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
A + H W++ K+ G+ V A DL G +G ++ +
Sbjct: 3 FAHFVLIHTICHG-AWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPL 61
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
L+F + + E L GES GG + + +F + P
Sbjct: 62 LTFLEALPPGEKV-----ILVGESCGGLNIAIAADKYCEKI-AAAVFHNS-VLPDTEHCP 114
Query: 175 SKLHLFMYGLLFGLADTWAAM--PDNKMVGKAIKDPEKLK 212
S + + + DT D K + L+
Sbjct: 115 SYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLR 154
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 2e-05
Identities = 36/271 (13%), Positives = 71/271 (26%), Gaps = 60/271 (22%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105
+ P + V + HG + +++ G + A D GH G
Sbjct: 48 WSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGH----------G 97
Query: 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165
+ V A D+ P G + A L + ++E
Sbjct: 98 ERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEG----------- 146
Query: 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKP 225
P + GL G D +
Sbjct: 147 --------PRPTGWW--GLSMGTMMGLPV---------TASDKRIKVALLGLM--GVEGV 185
Query: 226 RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
+ +A +VT P + D + S L+ K + K++ +
Sbjct: 186 NGEDLVRLAP----------QVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNP 235
Query: 286 GMYHSLIQGEPDENANLVLKDMREWIDERVE 316
G + ++ E +++D+R++
Sbjct: 236 GKHSAVPTWEMF-------AGTVDYLDQRLK 259
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 35/277 (12%), Positives = 77/277 (27%), Gaps = 41/277 (14%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-----GIRCYLGDMEKVA 111
TV + HG+G D M++ + + V D +G G+SD R +E A
Sbjct: 30 TVLLAHGFGCD-QNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYS--SLEGYA 85
Query: 112 ASSLSFFKHVRDSEPYRDLPGFLF-GESMGGAATMLMYFQSEPNTWTGLIF---SAPLFV 167
+ DL G S+ + + + + S
Sbjct: 86 KDVEEILVAL-------DLVNVSIIGHSVSSIIAGIASTH-VGDRISDITMICPSPCFMN 137
Query: 168 IPEN----MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTG 223
P + + L + + + ++G + E + ++ +
Sbjct: 138 FPPDYVGGFERDDLEELINLMDKNYIGWANYLAPL-VMGASH-SSELIGELSGSFCTTDP 195
Query: 224 KPRVGTMREIARVCQYIQDNF---SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280
+ D ++ P L D + P + + E ++
Sbjct: 196 IVAKTFAKATFFS-----DYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNS--Q 248
Query: 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317
+++ H L + + + +I R
Sbjct: 249 LELIQAEGHCLHMTDAGL----ITPLLIHFIQNNQTR 281
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 49/263 (18%), Positives = 94/263 (35%), Gaps = 27/263 (10%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD---GIRCYLGDMEKVAASSLSFF 118
G+G D ++ + +F + V D +G G SD ++ A L
Sbjct: 27 PGFGCD-QSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVC 84
Query: 119 KHVRDSEPYRDLPGFLF-GESMGGAATMLMYFQSEPNTWTGLIF---SAPLFVIPENMKP 174
+ + DL +F G S+G ML P ++ L+ S P
Sbjct: 85 EAL-------DLKETVFVGHSVGALIGMLAS-IRRPELFSHLVMVGPSPCYLNDPPEYYG 136
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ GLL + + + P++ ++ R+ V R+ A
Sbjct: 137 GFEEEQLLGLLEMMEKNYIGWATV-FAATVLNQPDRPEIKEELESRFCSTDPVIA-RQFA 194
Query: 235 RVCQY--IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292
+ + +++ SKVTVP L + D + T K +++ + S+K + H
Sbjct: 195 KAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYS--SLKQMEARGHCPH 252
Query: 293 QGEPDENANLVLKDMREWIDERV 315
PDE ++ + +++ V
Sbjct: 253 MSHPDE----TIQLIGDYLKAHV 271
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 51/277 (18%), Positives = 86/277 (31%), Gaps = 47/277 (16%)
Query: 57 TVYMTHGYGSD-TGWM-FQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAAS 113
V + HG G+ ++ + A Y V A D+LG G++ Y ++
Sbjct: 38 PVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDIEY--TQDRRIRH 94
Query: 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP---LFVIPE 170
F K + + G SMGGA + + L+ + I E
Sbjct: 95 LHDFIKAMNFDGKV-----SIVGNSMGGATGLGVSVL-HSELVNALVLMGSAGLVVEIHE 148
Query: 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL--KVIASNPRRYTGKPRVG 228
+++P + T M +V D K+ +I RYT
Sbjct: 149 DLRP----------IINYDFTREGMV--HLVKALTNDGFKIDDAMIN---SRYTYATDEA 193
Query: 229 TMREIARVCQYIQDNF---------SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADK 279
T + Q+I++ KV VP L V G D V ++ + +
Sbjct: 194 TRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSW- 252
Query: 280 SIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316
I H E+ ++ RV+
Sbjct: 253 -GYIIPHCGHWA----MIEHPEDFANATLSFLSLRVD 284
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 54/293 (18%), Positives = 96/293 (32%), Gaps = 34/293 (11%)
Query: 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92
T +G +F + + P D V HG+ + + F + GY V A D
Sbjct: 2 TVTTSDGTNIFYKDWGPRDGL---PVVFHHGWPLS-ADDWDNQMLFFLSHGYRVIAHDRR 57
Query: 93 GHGRSD-GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQ 150
GHGRSD + DM+ AA + + + DL G G S GG +
Sbjct: 58 GHGRSDQPSTGH--DMDTYAADVAALTEAL-------DLRGAVHIGHSTGGGEVARYVAR 108
Query: 151 SEPNTWTGLIF---SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207
+EP + P+ V + LA A + G
Sbjct: 109 AEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGF 168
Query: 208 PEKLKVIASNPRRYT--------GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259
+ ++ + + + D+ ++ VP L HGT D
Sbjct: 169 NREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFT--DDLKRIDVPVLVAHGTDD 226
Query: 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
V + + A+ ++K Y+G+ H + + ++ D+ ++
Sbjct: 227 QVVPYADAAPKSAEL-LANATLKSYEGLPHGM----LSTHPEVLNPDLLAFVK 274
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 22/99 (22%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD--------GIRCYLGDME 108
V HG + G +Q++ + A GY V A DL GHGRS +L ++
Sbjct: 28 VVLCIHGIL-EQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQID 86
Query: 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147
+V P + L L G SMG +
Sbjct: 87 RVI-----------QELPDQPL--LLVGHSMGAMLATAI 112
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 46/284 (16%), Positives = 79/284 (27%), Gaps = 65/284 (22%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106
P + + HGY S++G K+ ++ G+ V A D+ G G
Sbjct: 100 IKPKTEGKHPALIRFHGYSSNSGDWNDKL--NYVAAGFTVVAMDVRGQGGQSQ------- 150
Query: 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
L G + A ML +T +
Sbjct: 151 --------------DVGGVTGNTLNGHIIRGLDDDADNMLFRHIFL-DTAQLAGIVMNMP 195
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNP------RR 220
+ E+ + + G G + A A +P KV++ P R
Sbjct: 196 EVDED------RVGVMGPSQGGGLSLAC---------AALEPRVRKVVSEYPFLSDYKRV 240
Query: 221 YTGKPRVGTMREIARVCQYIQD------------------NF-SKVTVPFLTVHGTADGV 261
+ +EI + N ++ L G D V
Sbjct: 241 WDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQV 300
Query: 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLK 305
P++ Y + K IK+Y H ++G D +L+
Sbjct: 301 CPPSTVFAAYNNI-QSKKDIKVYPDYGHEPMRGFGDLAMQFMLE 343
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 57/293 (19%), Positives = 102/293 (34%), Gaps = 34/293 (11%)
Query: 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92
Y T +G ++F + + P D V ++ HG+ + + F GY V A D
Sbjct: 3 YVTTKDGVQIFYKDWGPRDAPV---IHFHHGWPLS-ADDWDAQLLFFLAHGYRVVAHDRR 58
Query: 93 GHGRSD-GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQ 150
GHGRS + DM+ A + H+ + G G S GG + +
Sbjct: 59 GHGRSSQVWDGH--DMDHYADDVAAVVAHL-------GIQGAVHVGHSTGGGEVVRYMAR 109
Query: 151 SEPNTWTGLIF---SAPLFVI----PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGK 203
+ + PL V P + S F + A + +P G
Sbjct: 110 HPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGY 169
Query: 204 AIKDPEKLKVIASNPRRY----TGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259
E + I N R + K + ++ ++ + P L +HG D
Sbjct: 170 NRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFT--EDLKGIQQPVLVMHGDDD 227
Query: 260 GVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
+ P + + + ++K Y G H + P +A+++ D+ +I
Sbjct: 228 QI-VPYENSGVLSAKLLPNGALKTYKGYPHGM----PTTHADVINADLLAFIR 275
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 2e-04
Identities = 21/112 (18%), Positives = 33/112 (29%), Gaps = 19/112 (16%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHGRSD-------GIRCYLGDME 108
+ + HG G + + + + + A DL HG + D+
Sbjct: 40 VLLLLHGGGH-SALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVG 98
Query: 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160
V V P L G SMGGA + + + GL
Sbjct: 99 NV----------VEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLC 140
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 Length = 273 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 2e-04
Identities = 40/301 (13%), Positives = 84/301 (27%), Gaps = 52/301 (17%)
Query: 21 EYYTSQGVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG--------SDTGWMF 72
++ S VR T K T F + Q + V HG +D +
Sbjct: 10 HHHMSNTVRA-ISPDITLFNKTLT--FQEISQNTREAVIYIHGGAWNDPENTPNDFNQLA 66
Query: 73 QKICISFATWGYAVFAAD--LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130
I ++ + L A S+++ +
Sbjct: 67 NTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDAVSNITRLVKEKGLTNI--- 116
Query: 131 PGFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189
+ G S+G ++ +P S + ++ K + G+ + L
Sbjct: 117 --NMVGHSVGATFIWQILAALKDPQEK----MSEAQLQMLGLLQIVKRVFLLDGI-YSLK 169
Query: 190 DTWAAMPDNK-MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT 248
+ P+ A D ++ +RV Y++ S+ +
Sbjct: 170 ELLIEYPEYDCFTRLAFPDGIQMYEEEP-----------------SRVMPYVKKALSRFS 212
Query: 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK--IYDGMYHSLIQGEPDENANLVLKD 306
+ VH +D + + L S K + D H+ + + A + +
Sbjct: 213 IDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNG-KVAKYIFDN 271
Query: 307 M 307
+
Sbjct: 272 I 272
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 Length = 763 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 2e-04
Identities = 34/277 (12%), Positives = 66/277 (23%), Gaps = 35/277 (12%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL- 115
+ Y GW + + F T G+A +G SDG + + + +++
Sbjct: 256 PIVDKAPYRFTHGWTYS-LNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVI 314
Query: 116 -----------SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164
S K + + + G+S G
Sbjct: 315 DWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEG---------- 364
Query: 165 LFVIPENMKPSKLHLFMYG----LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR 220
L +I S + + G + D + +
Sbjct: 365 LELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEK 424
Query: 221 YTGKPRVGTMREIARVCQYIQD-----NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275
+ R+ Q+ D N KV L VHG D P + ++
Sbjct: 425 RLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALP 484
Query: 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
H + + + + +
Sbjct: 485 EGHAKHAFLHRGAHIYMNSWQSID---FSETINAYFV 518
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 36/268 (13%), Positives = 82/268 (30%), Gaps = 33/268 (12%)
Query: 57 TVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
V + HG G + + ++ I + Y V A D++G G +D Y + +
Sbjct: 27 PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHII 86
Query: 116 SFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ ++ + G + GG + + ++ + +
Sbjct: 87 GIMDAL-------EIEKAHIVGNAFGGGLAIATALR-YSERVDRMVLMGAAGTRFDVTEG 138
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNK---------MVGKAIKDPEKLKVIASNPRRYTGKP 225
+ + + ++ + +A P + +S P
Sbjct: 139 LNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPE----P 194
Query: 226 RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285
R + +A ++ + L +HG D V +SS L E A + ++
Sbjct: 195 RQRWIDALASS----DEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQ--LHVFG 248
Query: 286 GMYHSLIQGEPDENANLVLKDMREWIDE 313
H E + + + E+ +E
Sbjct: 249 RCGHWT----QIEQTDRFNRLVVEFFNE 272
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 43/290 (14%), Positives = 78/290 (26%), Gaps = 34/290 (11%)
Query: 33 KYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAV 86
K L +Q K + HG G G MF I T Y +
Sbjct: 7 KVITKDAFALPYTIIKAKNQPTKGVIVYIHG-G---GLMFGKANDLSPQYIDILTEHYDL 62
Query: 87 FAAD--LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAAT 144
LL D I + D+ A+ F ++ Y + P F FG S G +
Sbjct: 63 IQLSYRLLPEVSLDCI---IEDVY--AS-----FDAIQ--SQYSNCPIFTFGRSSGAYLS 110
Query: 145 MLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204
+L+ + + G+I I + + A + V +
Sbjct: 111 LLIARDRDID---GVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQD 167
Query: 205 IKDPEKLKVIASNPRRYTGKPR-VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263
+ +I R + D P H D
Sbjct: 168 --QIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKT-LPPVFIAHCNGDYDVP 224
Query: 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
S+ + + + + H + DE + + + ++++
Sbjct: 225 VEESEHIMNHVPHST--FERVNKNEHDFDRRPNDEAIT-IYRKVVDFLNA 271
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 21/99 (21%), Positives = 30/99 (30%), Gaps = 23/99 (23%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD--------GIRCYLGDME 108
V G F+ + A + V ++ G G SD YL D+E
Sbjct: 31 PVLCLPGLT-RNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLE 88
Query: 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147
+ A G S+GG TML+
Sbjct: 89 ALLA-------QEGIERFV------AIGTSLGGLLTMLL 114
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 38.9 bits (90), Expect = 4e-04
Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 19/96 (19%)
Query: 58 VYMTHGYGSDTGWMFQKICISFATW------GYAVFAADLLGHGRSDGIRCYLGDMEKVA 111
V+ G G + + W GYA + DL G+GR++G R E++A
Sbjct: 15 VFDRVGKGPPV----LLVAEEASRWPEALPEGYAFYLLDLPGYGRTEGPRM---APEELA 67
Query: 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147
F + P+ + +G A +
Sbjct: 68 HFVAGFAVMMNLGAPW------VLLRGLGLALGPHL 97
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 5e-04
Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 10/160 (6%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
K + H W + KI + G+ V A DL G + + + +
Sbjct: 12 KKHFVLVHAAFHG-AWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPL 70
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ F + +E L G ++GG + ++ P + +F + + N+
Sbjct: 71 MEFMASLPANE-----KIILVGHALGG-LAISKAMETFPEKISVAVFLSG-LMPGPNIDA 123
Query: 175 SKLHLFMYGLLFGLADTWAAMPD--NKMVGKAIKDPEKLK 212
+ + + G D + I P+ L
Sbjct: 124 TTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLA 163
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 6e-04
Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 8/138 (5%)
Query: 36 ETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHG 95
E P+ +++ L + +G G+ + + +A+ G+ V AA+ G
Sbjct: 30 EGPSCRIYRPRDLGQGGVRHPVILWGNGTGAG-PSTYAGLLSHWASHGFVVAAAETSNAG 88
Query: 96 RSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNT 155
+ L + + + + ++ G S GG +++ +
Sbjct: 89 TGREMLACLDYLVRENDTPYGTYSGKLNTGRV-----GTSGHSQGGGGSIMA--GQDTRV 141
Query: 156 WTGLIFSAPLFVIPENMK 173
T + +
Sbjct: 142 RTTAPIQPYTLGLGHDSA 159
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 7e-04
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 12/108 (11%)
Query: 41 KLFTQSFLPLDQKVKATVYMTHG-YGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG 99
KL ++ +Q + + + HG +GS + + + D+ HG S
Sbjct: 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNL--GVLARDLVN-DHNIIQVDVRNHGLSPR 58
Query: 100 IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM 147
+ +A + ++ + G SMGG A M +
Sbjct: 59 EPVM--NYPAMAQDLVDTLDALQIDKAT------FIGHSMGGKAVMAL 98
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 34/219 (15%), Positives = 56/219 (25%), Gaps = 26/219 (11%)
Query: 62 HGYGSD-TGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF 118
HG T W A W Y +A D++G G A L F
Sbjct: 74 HGALFSSTMWYPN-----IADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVF 128
Query: 119 KHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177
++ + + G S+GG TM + P +P
Sbjct: 129 DNL-------GIEKSHMIGLSLGGLHTMNFLLR-MPERVKSAAILSP-AETFLPFHHDFY 179
Query: 178 HLFMYGLLFGLADTWAAM--PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
+ +T+ D ++ K V+ + R G
Sbjct: 180 KYALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTD 239
Query: 236 VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274
+ VP L + G + + P S+
Sbjct: 240 ------EELRSARVPILLLLGEHEVIYDPHSALHRASSF 272
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A Length = 397 | Back alignment and structure |
|---|
Score = 39.9 bits (92), Expect = 8e-04
Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 9/181 (4%)
Query: 78 SFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG----F 133
A+ GY V +D LG G+S+ A++++ + R + P
Sbjct: 112 RLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVM 171
Query: 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAP-LFVIPENMKPSKLHLFMYGLLFGLADTW 192
L G S GG M + E + A P ++ + L + G
Sbjct: 172 LSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALEQTFLDSWSGSNAVGENTFG 231
Query: 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252
+ +V I P + P + + Q + D F T+P +
Sbjct: 232 ILLGSYAIVAMQHTYKN----IYLEPGQVFQDPWAAKVEPLFPGKQSLTDMFLNDTLPSI 287
Query: 253 T 253
Sbjct: 288 D 288
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 38.9 bits (90), Expect = 9e-04
Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 15/157 (9%)
Query: 34 YFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM----FQKICISFATWGYAVFAA 89
+ P G+L P + T + H + G M + + G
Sbjct: 10 LIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRF 69
Query: 90 DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149
+ G G+S G R G E ++ + S+ L GF FG A +
Sbjct: 70 NFRGVGKSQG-RYDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFG------AYISAKV 122
Query: 150 QSEPNTWTGLIFSAPLFVIPENMKPSKLH---LFMYG 183
+ LI AP +++ L + G
Sbjct: 123 AYDQKV-AQLISVAPPVFYEGFASLTQMASPWLIVQG 158
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 323 | |||
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.98 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.98 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.98 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.98 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.98 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.98 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.97 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.97 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.94 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.97 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.97 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.97 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.96 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.96 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.96 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.96 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.96 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.96 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.96 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.96 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.96 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.96 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.96 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.95 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.95 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.95 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.95 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.95 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.95 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.95 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.95 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.95 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.95 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.95 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.95 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.94 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.94 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.94 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.94 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.94 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.94 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.94 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.94 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.94 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.94 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.94 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.94 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.94 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.94 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.94 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.94 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.93 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.93 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.93 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.93 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.93 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.93 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.93 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.93 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.93 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.93 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.93 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.93 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.92 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.92 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.92 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.92 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.92 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.92 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.92 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.91 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.91 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.91 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.91 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.91 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.91 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.9 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.9 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.9 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.9 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.9 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.9 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.89 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.89 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.89 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.89 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.89 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.88 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.88 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.87 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.87 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.86 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.86 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.86 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.85 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.85 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.83 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.83 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.83 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.82 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.82 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.81 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.81 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.81 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.78 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.77 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.77 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.75 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.74 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.74 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.72 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.71 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.71 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.7 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.69 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.69 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.69 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.69 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.67 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.6 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.52 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.52 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.5 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.43 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.4 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.39 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.33 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.24 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.19 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.15 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.99 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.99 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.95 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.95 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.93 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.9 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.87 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.81 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.78 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.75 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.72 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.7 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.67 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.65 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.63 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 98.63 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.48 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.47 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.45 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.28 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 98.27 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.17 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 98.14 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 98.05 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.72 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 97.61 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.46 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 97.41 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.39 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 97.16 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 97.16 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 97.09 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 97.08 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.99 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.99 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.98 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.91 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.82 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.57 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.71 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 95.61 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.96 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 93.57 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 93.16 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 91.85 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 81.58 |
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=250.27 Aligned_cols=284 Identities=25% Similarity=0.443 Sum_probs=218.5
Q ss_pred ccCccccee-EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 25 SQGVRNGKK-YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 25 ~~~~~~~~~-~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..++++++. .+...+| +|+|..+++.+ +++|+|||+||++++.. .|..+++.|+++||.|+++|+||+|.|.....
T Consensus 29 ~~~~~~~~~~~~~~~dg~~l~~~~~~p~~-~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 106 (342)
T 3hju_A 29 PQSIPYQDLPHLVNADGQYLFCRYWKPTG-TPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERM 106 (342)
T ss_dssp TTSCBTTSSCEEECTTSCEEEEEEECCSS-CCSEEEEEECCTTCCGG-GGHHHHHHHHTTTEEEEEECCTTSTTSCSSTT
T ss_pred CCCcccccCceEEccCCeEEEEEEeCCCC-CCCcEEEEECCCCcccc-hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCC
Confidence 345667777 8899999 99999999875 67899999999998888 89999999999999999999999999987665
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
...+++++++|+.++++++....+ ..+++|+|||+||.+++.++.++|++ |+++|+++|............ .....
T Consensus 107 ~~~~~~~~~~d~~~~l~~l~~~~~--~~~v~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~ 182 (342)
T 3hju_A 107 VVSDFHVFVRDVLQHVDSMQKDYP--GLPVFLLGHSMGGAIAILTAAERPGH-FAGMVLISPLVLANPESATTF-KVLAA 182 (342)
T ss_dssp CCSCTHHHHHHHHHHHHHHHHHST--TCCEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCCCSCCTTTTSHH-HHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHhCC--CCcEEEEEeChHHHHHHHHHHhCccc-cceEEEECcccccchhhhhHH-HHHHH
Confidence 556899999999999999998754 56899999999999999999999998 999999999876554432221 11111
Q ss_pred hhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
..+....+...... ...............+..+..........................+.++++|+|+|+|++|.++
T Consensus 183 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~ 260 (342)
T 3hju_A 183 KVLNLVLPNLSLGP--IDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLC 260 (342)
T ss_dssp HHHHHHCTTCBCCC--CCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSS
T ss_pred HHHHHhccccccCc--ccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCccc
Confidence 22222222211111 1111222344445555555555555556666666666666677788999999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.+.++.+.+.+.++++++++++++||.+++++++. ..++.+.+.+||++++..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 261 DSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEV-TNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp CHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHH-HHHHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHH-HHHHHHHHHHHHhcccCC
Confidence 999999999998555899999999999999877654 556778899999998754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=246.96 Aligned_cols=282 Identities=25% Similarity=0.458 Sum_probs=212.0
Q ss_pred Cccccee-EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC
Q 020633 27 GVRNGKK-YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 27 ~~~~~~~-~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
.+++++. .+...+| +|+|..+++.+ +++|+||++||++++.. .|..+++.|+++||+|+++|+||||.|.......
T Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 90 (303)
T 3pe6_A 13 SIPYQDLPHLVNADGQYLFCRYWAPTG-TPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVV 90 (303)
T ss_dssp SCBGGGSCEEECTTSCEEEEEEECCSS-CCSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCC
T ss_pred CcccCCCCeEecCCCeEEEEEEeccCC-CCCeEEEEECCCCchhh-HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCC
Confidence 4455665 8888999 99999999875 66899999999998887 8999999999999999999999999998765555
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+++++++|+.++++++..+.+ ..+++++|||+||.+++.++.++|++ |+++|+++|........... ........
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~ 166 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDYP--GLPVFLLGHSMGGAIAILTAAERPGH-FAGMVLISPLVLANPESATT-FKVLAAKV 166 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHST--TCCEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCSSSBCHHHHHH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhccC--CceEEEEEeCHHHHHHHHHHHhCccc-ccEEEEECccccCchhccHH-HHHHHHHH
Confidence 6889999999999999988754 56899999999999999999999998 99999999876543211111 11111111
Q ss_pred hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
............ ...............+..+..........................+.++++|+++|+|++|.+++.
T Consensus 167 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 244 (303)
T 3pe6_A 167 LNSVLPNLSSGP--IDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDS 244 (303)
T ss_dssp HHTTCCSCCCCC--CCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCH
T ss_pred HHHhcccccCCc--cchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCCh
Confidence 111111111110 111112233444455555555555555555666666666666778889999999999999999999
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.++.+.+.+..+++++++++++||.+++++|+. ..++.+.+.+||++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~-~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 245 KGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEV-TNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp HHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHH-HHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHhcccCCceEEEeCCCccceeccchHH-HHHHHHHHHHHHhccCCC
Confidence 9999999998545889999999999999877654 556788899999988754
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=242.28 Aligned_cols=231 Identities=17% Similarity=0.244 Sum_probs=166.5
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
++.|||+||++++.. .|..+++.|+++||+|+++|+||||.|..... ..+++++++|+.++++++... ..+++|
T Consensus 51 ~~~VlllHG~~~s~~-~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~-~~~~~~~~~d~~~~~~~l~~~----~~~v~l 124 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPAEMA-ASTASDWTADIVAAMRWLEER----CDVLFM 124 (281)
T ss_dssp SEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHH-TCCHHHHHHHHHHHHHHHHHH----CSEEEE
T ss_pred CceEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEECCCCCCCCCcccc-CCCHHHHHHHHHHHHHHHHhC----CCeEEE
Confidence 567999999998877 89999999999999999999999999964332 248899999999999999766 348999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+||||||.+++.+|.++|++ |+++|+++|....... ...............+... ........
T Consensus 125 vG~S~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~--------- 187 (281)
T 4fbl_A 125 TGLSMGGALTVWAAGQFPER-FAGIMPINAALRMESP---DLAALAFNPDAPAELPGIG----SDIKAEGV--------- 187 (281)
T ss_dssp EEETHHHHHHHHHHHHSTTT-CSEEEEESCCSCCCCH---HHHHHHTCTTCCSEEECCC----CCCSSTTC---------
T ss_pred EEECcchHHHHHHHHhCchh-hhhhhcccchhcccch---hhHHHHHhHhhHHhhhcch----hhhhhHHH---------
Confidence 99999999999999999999 9999999987654321 1111110000000000000 00000000
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
...............+..........+.++++|+|+|+|++|.++|++.++.+++.+.++++++++++++||.++++
T Consensus 188 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e 264 (281)
T 4fbl_A 188 ---KELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLD 264 (281)
T ss_dssp ---CCCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGS
T ss_pred ---HHhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccc
Confidence 00000111122334444444445667889999999999999999999999999999976778999999999998854
Q ss_pred CCchhHHHHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWIDER 314 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~~ 314 (323)
. ..+++.+.|.+||++|
T Consensus 265 ~---~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 265 N---DKELILERSLAFIRKH 281 (281)
T ss_dssp T---THHHHHHHHHHHHHTC
T ss_pred c---CHHHHHHHHHHHHHhC
Confidence 3 3566899999999874
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=245.40 Aligned_cols=253 Identities=11% Similarity=0.060 Sum_probs=168.8
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
.|+|..+++.. ..+|+|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+......++++++++|+.++++.
T Consensus 2 ~i~y~~~g~~~-~~~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 78 (268)
T 3v48_A 2 HMKLSLSPPPY-ADAPVVVLISGLGGSGS-YWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVA 78 (268)
T ss_dssp CSCCEECCCSS-TTCCEEEEECCTTCCGG-GGHHHHHHHHT-TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCC-CCCCEEEEeCCCCccHH-HHHHHHHHHhh-cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHH
Confidence 46777777654 45789999999999887 89999999976 59999999999999986554456999999999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh-----hhhcccc-c
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF-----GLADTWA-A 194 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~ 194 (323)
+..+ +++|+||||||.+++.+|.++|++ |+++|++++.......... ........+. .+..... .
T Consensus 79 l~~~------~~~lvGhS~GG~ia~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T 3v48_A 79 AGIE------HYAVVGHALGALVGMQLALDYPAS-VTVLISVNGWLRINAHTRR--CFQVRERLLYSGGAQAWVEAQPLF 149 (268)
T ss_dssp TTCC------SEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSBCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC------CeEEEEecHHHHHHHHHHHhChhh-ceEEEEeccccccchhhhH--HHHHHHHHHhccchhhhhhhhhhh
Confidence 8754 899999999999999999999999 9999999876543211100 0000000000 0000000 0
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
.....+.... ..............+ .............. +....+.++++|+|+|+|++|.++|.+.++.+.+
T Consensus 150 ~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~ 224 (268)
T 3v48_A 150 LYPADWMAAR--APRLEAEDALALAHF---QGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHA 224 (268)
T ss_dssp HSCHHHHHTT--HHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred cCchhhhhcc--cccchhhHHHHHhhc---CchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHH
Confidence 0000000000 000000000000000 00011111111111 1234577899999999999999999999999999
Q ss_pred HcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 273 KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 273 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+ ++.++++++++||++++++|+. +++.|.+||.+...
T Consensus 225 ~~--p~~~~~~~~~~GH~~~~e~p~~----~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 225 AL--PDSQKMVMPYGGHACNVTDPET----FNALLLNGLASLLH 262 (268)
T ss_dssp HC--SSEEEEEESSCCTTHHHHCHHH----HHHHHHHHHHHHHH
T ss_pred hC--CcCeEEEeCCCCcchhhcCHHH----HHHHHHHHHHHhcc
Confidence 99 8899999999999999766655 99999999987653
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=245.22 Aligned_cols=254 Identities=13% Similarity=0.127 Sum_probs=172.0
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
..++.+.|| +|+|..+++++ +|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.... .++++++
T Consensus 6 ~~~~~~~~g~~l~y~~~G~~~---~p~lvl~hG~~~~~~-~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~-~~~~~~~ 79 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGAAE---KPLLALSNSIGTTLH-MWDAQLPALTR-HFRVLRYDARGHGASSVPPG-PYTLARL 79 (266)
T ss_dssp CEEEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGGGGHHHHHT-TCEEEEECCTTSTTSCCCCS-CCCHHHH
T ss_pred ceEEeccCCcEEEEEecCCCC---CCEEEEeCCCccCHH-HHHHHHHHhhc-CcEEEEEcCCCCCCCCCCCC-CCCHHHH
Confidence 456778899 99999998743 689999999998877 89999999986 59999999999999986544 3589999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh-hhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF-GLA 189 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 189 (323)
++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+.. ....... ...
T Consensus 80 a~dl~~~l~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~r-v~~lvl~~~~~~~~~~--~~~~~-~~~~~~~~~~~ 149 (266)
T 3om8_A 80 GEDVLELLDALEVR------RAHFLGLSLGGIVGQWLALHAPQR-IERLVLANTSAWLGPA--AQWDE-RIAAVLQAEDM 149 (266)
T ss_dssp HHHHHHHHHHTTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSBCCCS--HHHHH-HHHHHHHCSSS
T ss_pred HHHHHHHHHHhCCC------ceEEEEEChHHHHHHHHHHhChHh-hheeeEecCcccCCch--hHHHH-HHHHHHccccH
Confidence 99999999999754 899999999999999999999999 9999999876543321 11110 0000000 000
Q ss_pred cccccCCcccccccc--cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 190 DTWAAMPDNKMVGKA--IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
..........+.... .........+..... . .............. +....+.++++|+|+|+|++|.++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~ 225 (266)
T 3om8_A 150 SETAAGFLGNWFPPALLERAEPVVERFRAMLM---A-TNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAAS 225 (266)
T ss_dssp HHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHH---T-SCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHH
T ss_pred HHHHHHHHHHhcChhhhhcChHHHHHHHHHHH---h-CCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHH
Confidence 000000000000000 000010001000000 0 00000111111111 123457889999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.++.+.+.+ +++++++++ +||++++|+|++ +++.|.+||.
T Consensus 226 ~~~~l~~~i--p~a~~~~i~-~gH~~~~e~p~~----~~~~i~~Fl~ 265 (266)
T 3om8_A 226 HGELIAASI--AGARLVTLP-AVHLSNVEFPQA----FEGAVLSFLG 265 (266)
T ss_dssp HHHHHHHHS--TTCEEEEES-CCSCHHHHCHHH----HHHHHHHHHT
T ss_pred HHHHHHHhC--CCCEEEEeC-CCCCccccCHHH----HHHHHHHHhc
Confidence 999999999 889999998 799999766665 8899999984
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=242.97 Aligned_cols=266 Identities=12% Similarity=0.053 Sum_probs=171.7
Q ss_pred cccceeEEEcCC---C-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-c
Q 020633 28 VRNGKKYFETPN---G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-C 102 (323)
Q Consensus 28 ~~~~~~~~~~~~---g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~ 102 (323)
.+.+..++...+ | +|+|...++.+ ++++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+. .
T Consensus 18 ~~~~~~~~~~~g~~~g~~l~y~~~G~~~--~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~ 94 (310)
T 1b6g_A 18 YPFSPNYLDDLPGYPGLRAHYLDEGNSD--AEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE 94 (310)
T ss_dssp CCCCCEEEESCTTCTTCEEEEEEEECTT--CSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCG
T ss_pred CCCCceEEEecCCccceEEEEEEeCCCC--CCCEEEEECCCCCchh-hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCc
Confidence 344455666666 3 89999988632 1579999999998877 8999999999889999999999999998654 2
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC---------c
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM---------K 173 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~---------~ 173 (323)
..++++.+++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++........ .
T Consensus 95 ~~y~~~~~a~dl~~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~r-v~~Lvl~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T 1b6g_A 95 EDYTFEFHRNFLLALIERLDLR------NITLVVQDWGGFLGLTLPMADPSR-FKRLIIMNAXLMTDPVTQPAFSAFVTQ 167 (310)
T ss_dssp GGCCHHHHHHHHHHHHHHHTCC------SEEEEECTHHHHHHTTSGGGSGGG-EEEEEEESCCCCCCTTTCTHHHHTTTS
T ss_pred CCcCHHHHHHHHHHHHHHcCCC------CEEEEEcChHHHHHHHHHHhChHh-heEEEEeccccccCCccccchhhhhhc
Confidence 3469999999999999999854 899999999999999999999999 99999999854211100 0
Q ss_pred hhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH--------HHHHHHHhcCC
Q 020633 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA--------RVCQYIQDNFS 245 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 245 (323)
.............. .+............... .......+.................... .......+.+.
T Consensus 168 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (310)
T 1b6g_A 168 PADGFTAWKYDLVT-PSDLRLDQFMKRWAPTL-TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQ 245 (310)
T ss_dssp STTTHHHHHHHHHS-CSSCCHHHHHHHHSTTC-CHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHhcc-CchhhhhhHHhhcCCCC-CHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhh
Confidence 00000000000000 00000000000000000 1111111111100000000000000000 01112345567
Q ss_pred -CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe--cCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 246 -KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY--DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 246 -~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++++|+|+|+|++|.+++ +..+.+.+.+ ++.+++++ +++||++++ +|+ ++++.|.+||++
T Consensus 246 ~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~i--p~~~~~~i~~~~~GH~~~~-~p~----~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 246 NDWNGQTFMAIGMKDKLLG-PDVMYPMKAL--INGCPEPLEIADAGHFVQE-FGE----QVAREALKHFAE 308 (310)
T ss_dssp HTCCSEEEEEEETTCSSSS-HHHHHHHHHH--STTCCCCEEETTCCSCGGG-GHH----HHHHHHHHHHHH
T ss_pred ccccCceEEEeccCcchhh-hHHHHHHHhc--ccccceeeecCCcccchhh-ChH----HHHHHHHHHHhc
Confidence 899999999999999999 8888898888 77788777 999999995 554 499999999975
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=240.08 Aligned_cols=258 Identities=15% Similarity=0.080 Sum_probs=166.7
Q ss_pred ccceeEEEcCC---C-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-c
Q 020633 29 RNGKKYFETPN---G-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-Y 103 (323)
Q Consensus 29 ~~~~~~~~~~~---g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~ 103 (323)
+.+..++...+ | +++|..+++.+ .+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .
T Consensus 18 ~~~~~~~~~~g~~~g~~l~y~~~G~~~--~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~ 94 (297)
T 2xt0_A 18 PYAPHYLEGLPGFEGLRMHYVDEGPRD--AEHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDA 94 (297)
T ss_dssp CCCCEEECCCTTCTTCCEEEEEESCTT--CSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGG
T ss_pred CCccEEEeccCCCCceEEEEEEccCCC--CCCeEEEECCCCCcce-eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcc
Confidence 33445566555 4 99999988632 1579999999998777 89999999998899999999999999986543 3
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
.++++++++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++..... ..... .......
T Consensus 95 ~~~~~~~a~dl~~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~~-v~~lvl~~~~~~~~-~~~~~-~~~~~~~ 165 (297)
T 2xt0_A 95 VYTFGFHRRSLLAFLDALQLE------RVTLVCQDWGGILGLTLPVDRPQL-VDRLIVMNTALAVG-LSPGK-GFESWRD 165 (297)
T ss_dssp GCCHHHHHHHHHHHHHHHTCC------SEEEEECHHHHHHHTTHHHHCTTS-EEEEEEESCCCCSS-SCSCH-HHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhCCC------CEEEEEECchHHHHHHHHHhChHH-hcEEEEECCCCCcc-cCCch-hHHHHHH
Confidence 469999999999999999754 899999999999999999999999 99999999854211 11010 0000000
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCC-------------CcCCCCchhHHHHHHHHHHHHHhcCC-CCCc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPR-------------RYTGKPRVGTMREIARVCQYIQDNFS-KVTV 249 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 249 (323)
.... .+............... .......+..... ........... .........+. ++++
T Consensus 166 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~i~~ 239 (297)
T 2xt0_A 166 FVAN-SPDLDVGKLMQRAIPGI-TDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGA----EIGRQAMSFWSTQWSG 239 (297)
T ss_dssp HHHT-CTTCCHHHHHHHHSTTC-CHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTH----HHHHHHHHHHHHTCCS
T ss_pred Hhhc-ccccchhHHHhccCccC-CHHHHHHHhccccCcchhHHHHHHHHhCccccccchh----hHHHHHHHHhhhccCC
Confidence 0000 00000000000000000 0111111110000 00000000000 00112334556 8899
Q ss_pred CEEEEeeCCCcccCchhHHHHHHHcCCCCccEEE--ecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 250 PFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI--YDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|+|+|+|++|.++| +..+.+.+.+ ++.++++ ++++||++++ +|++ +++.|.+||+
T Consensus 240 P~Lvi~G~~D~~~~-~~~~~~~~~~--p~~~~~~~~~~~~GH~~~~-~p~~----~~~~i~~fl~ 296 (297)
T 2xt0_A 240 PTFMAVGAQDPVLG-PEVMGMLRQA--IRGCPEPMIVEAGGHFVQE-HGEP----IARAALAAFG 296 (297)
T ss_dssp CEEEEEETTCSSSS-HHHHHHHHHH--STTCCCCEEETTCCSSGGG-GCHH----HHHHHHHHTT
T ss_pred CeEEEEeCCCcccC-hHHHHHHHhC--CCCeeEEeccCCCCcCccc-CHHH----HHHHHHHHHh
Confidence 99999999999999 8888888888 5665544 7899999996 6665 8899999974
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=239.26 Aligned_cols=256 Identities=17% Similarity=0.213 Sum_probs=165.3
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++.+.+| +|+|..+++.+ +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.... .++++++++
T Consensus 3 ~~~~~~g~~l~y~~~g~~~---~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 77 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGPRD---APVIHFHHGWPLSAD-DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWD-GHDMDHYAD 77 (276)
T ss_dssp EEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEECCCCcEEEEEecCCCC---CCeEEEECCCCcchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CCCHHHHHH
Confidence 3567788 99999998643 578999999998877 89999999999999999999999999986432 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCC--C----chhhHHHHHhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPEN--M----KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~--~----~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+++.++.++ |++ |+++|++++....... . ........+....
T Consensus 78 d~~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T 1zoi_A 78 DVAAVVAHLGIQ------GAVHVGHSTGGGEVVRYMARHPEDK-VAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQV 150 (276)
T ss_dssp HHHHHHHHHTCT------TCEEEEETHHHHHHHHHHHHCTTSC-CCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC------ceEEEEECccHHHHHHHHHHhCHHh-eeeeEEecCCCccccccccccccccHHHHHHHHHHH
Confidence 999999999754 799999999999999988887 888 9999999875322110 0 0000011110000
Q ss_pred h----hhhccccc-C-CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeC
Q 020633 186 F----GLADTWAA-M-PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 257 (323)
. .....+.. . ....................... . .............. +....+.++++|+|+|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~ 225 (276)
T 1zoi_A 151 ASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGM---I--GSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGD 225 (276)
T ss_dssp HHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEET
T ss_pred HHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhh---h--hhHHHHHHHHHHhcccchhhhccccCCCEEEEEcC
Confidence 0 00000000 0 00000000000011111110000 0 00000111111110 1123456789999999999
Q ss_pred CCcccCchh-HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 258 ADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|.+. .+.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 226 ~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~ 275 (276)
T 1zoi_A 226 DDQIVPYENSGVLSAKLL--PNGALKTYKGYPHGMPTTHA----DVINADLLAFIR 275 (276)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHTH----HHHHHHHHHHHT
T ss_pred CCcccChHHHHHHHHhhC--CCceEEEcCCCCCchhhhCH----HHHHHHHHHHhc
Confidence 999999884 45566666 78999999999999996554 459999999985
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=233.97 Aligned_cols=252 Identities=13% Similarity=0.133 Sum_probs=165.7
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+|+|..+|+.+...+++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+... ..+++++++|+.++++.
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~--~~~~~~~a~dl~~~l~~ 77 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLD-NLGVLARDLVND-HNIIQVDVRNHGLSPREP--VMNYPAMAQDLVDTLDA 77 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTT-TTHHHHHHHTTT-SCEEEECCTTSTTSCCCS--CCCHHHHHHHHHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHh-HHHHHHHHHHhh-CcEEEecCCCCCCCCCCC--CcCHHHHHHHHHHHHHH
Confidence 36788888653224789999999998877 899999999876 999999999999998654 35899999999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM 200 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (323)
+..+ +++|+||||||.+|+.+|.++|++ |+++|++++................+.......... .......
T Consensus 78 l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 148 (255)
T 3bf7_A 78 LQID------KATFIGHSMGGKAVMALTALAPDR-IDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQT--RQQAAAI 148 (255)
T ss_dssp HTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCS--HHHHHHH
T ss_pred cCCC------CeeEEeeCccHHHHHHHHHhCcHh-hccEEEEcCCcccCCcccHHHHHHHHHhcccccccc--HHHHHHH
Confidence 8744 899999999999999999999998 999999875432211110011111110000000000 0000000
Q ss_pred cccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH--hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC
Q 020633 201 VGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ--DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD 278 (323)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 278 (323)
......+......+............. ..+........ ..+.++++|+|+|+|++|.+++++..+.+.+.+ ++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~ 223 (255)
T 3bf7_A 149 MRQHLNEEGVIQFLLKSFVDGEWRFNV---PVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF--PQ 223 (255)
T ss_dssp HTTTCCCHHHHHHHHTTEETTEESSCH---HHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC--TT
T ss_pred HhhhcchhHHHHHHHHhccCCceeecH---HHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC--CC
Confidence 111111222222222111000000011 11111111111 346789999999999999999999999998888 78
Q ss_pred ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++++++++||++++++|+ ++.+.|.+||+++
T Consensus 224 ~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 224 ARAHVIAGAGHWVHAEKPD----AVLRAIRRYLNDH 255 (255)
T ss_dssp EEECCBTTCCSCHHHHCHH----HHHHHHHHHHHTC
T ss_pred CeEEEeCCCCCccccCCHH----HHHHHHHHHHhcC
Confidence 9999999999999976654 4899999999753
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=240.05 Aligned_cols=261 Identities=13% Similarity=0.135 Sum_probs=168.8
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +++|..+|++ ++++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+... ..++++++++|+.+
T Consensus 14 ~~g~~l~y~~~G~g---~~~pvvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-~~~~~~~~a~dl~~ 87 (316)
T 3afi_E 14 VLGSSMAYRETGAQ---DAPVVLFLHGNPTSSH-IWRNILPLVSPV-AHCIAPDLIGFGQSGKPD-IAYRFFDHVRYLDA 87 (316)
T ss_dssp ETTEEEEEEEESCT---TSCEEEEECCTTCCGG-GGTTTHHHHTTT-SEEEEECCTTSTTSCCCS-SCCCHHHHHHHHHH
T ss_pred eCCEEEEEEEeCCC---CCCeEEEECCCCCchH-HHHHHHHHHhhC-CEEEEECCCCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 367 9999998863 2469999999998887 899999999876 999999999999997643 34689999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC--CCc-----hh----hHHHHHhhhh
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE--NMK-----PS----KLHLFMYGLL 185 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~--~~~-----~~----~~~~~~~~~~ 185 (323)
+++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++...... ... .. .........+
T Consensus 88 ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
T 3afi_E 88 FIEQRGVT------SAYLVAQDWGTALAFHLAARRPDF-VRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKF 160 (316)
T ss_dssp HHHHTTCC------SEEEEEEEHHHHHHHHHHHHCTTT-EEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHcCCC------CEEEEEeCccHHHHHHHHHHCHHh-hhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHh
Confidence 99998754 899999999999999999999999 999999987432110 000 00 0000000000
Q ss_pred hh------hhc---ccccCCcccccccccCChHHHHHHhcCCCCcC---------CCCchhHHHHHHHHHHHHHhcCCCC
Q 020633 186 FG------LAD---TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYT---------GKPRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 186 ~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
.. ... .+.............................. .....................+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 240 (316)
T 3afi_E 161 RTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAAS 240 (316)
T ss_dssp TSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred cCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhcc
Confidence 00 000 00000000000000111111111110000000 0000000000111112233455678
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++|+|+|+|++|.++|.+..+.+.+.+ +++++++++++||+++++ ..+++.+.|.+||++....
T Consensus 241 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~GH~~~~e----~p~~~~~~i~~fl~~~~~~ 304 (316)
T 3afi_E 241 SYPKLLFTGEPGALVSPEFAERFAASL--TRCALIRLGAGLHYLQED----HADAIGRSVAGWIAGIEAV 304 (316)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHS--SSEEEEEEEEECSCHHHH----HHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEecCCCCccCHHHHHHHHHhC--CCCeEEEcCCCCCCchhh----CHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999988 889999999999999954 4555999999999876543
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=234.92 Aligned_cols=254 Identities=17% Similarity=0.239 Sum_probs=162.6
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++.+.|| +|+|..++. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. ..+++.+++
T Consensus 2 ~~~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~ 74 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGS-----GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT-GNDYDTFAD 74 (271)
T ss_dssp EEECTTSCEEEEEEESS-----SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEEcCCCCEEEEEccCC-----CCeEEEECCCCCcHH-HHHHHHHHHHhCCceEEEecCCCCccCCCCCC-CCCHHHHHH
Confidence 5678899 999999984 368999999998887 89999999998899999999999999986543 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCCC------chhhHHHHHhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENM------KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~~------~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+++.++..+ |++ |+++|++++........ ........+....
T Consensus 75 d~~~~l~~l~~~------~~~lvGhS~GG~~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (271)
T 3ia2_A 75 DIAQLIEHLDLK------EVTLVGFSMGGGDVARYIARHGSAR-VAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTEL 147 (271)
T ss_dssp HHHHHHHHHTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC------CceEEEEcccHHHHHHHHHHhCCcc-cceEEEEccCCccccCCCCCcccccHHHHHHHHHHH
Confidence 999999999754 899999999999777766665 777 99999998754321110 0000000000000
Q ss_pred ----hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCC
Q 020633 186 ----FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 186 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D 259 (323)
..+...+........................... .............. +....+.++++|+|+|+|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D 222 (271)
T 3ia2_A 148 LKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALL-----ASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHH-----SCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTC
T ss_pred HhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhh-----ccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCC
Confidence 0000000000000000000000000000000000 00001111111110 123446789999999999999
Q ss_pred cccCchhHH-HHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 260 GVTCPTSSK-LLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 260 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.++|++... .+.+.+ +++++++++++||++++++| +++++.|.+||+
T Consensus 223 ~~~p~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 223 QIVPFETTGKVAAELI--KGAELKVYKDAPHGFAVTHA----QQLNEDLLAFLK 270 (271)
T ss_dssp SSSCGGGTHHHHHHHS--TTCEEEEETTCCTTHHHHTH----HHHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHhC--CCceEEEEcCCCCcccccCH----HHHHHHHHHHhh
Confidence 999998754 445555 78999999999999996555 459999999985
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=238.06 Aligned_cols=250 Identities=14% Similarity=0.127 Sum_probs=163.2
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
....+| +++|...|. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. .++++++++|
T Consensus 11 ~~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~d 83 (281)
T 3fob_A 11 TENQAPIEIYYEDHGT-----GKPVVLIHGWPLSGR-SWEYQVPALVEAGYRVITYDRRGFGKSSQPWE-GYEYDTFTSD 83 (281)
T ss_dssp EETTEEEEEEEEEESS-----SEEEEEECCTTCCGG-GGTTTHHHHHHTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHH
T ss_pred CCCCCceEEEEEECCC-----CCeEEEECCCCCcHH-HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcc-ccCHHHHHHH
Confidence 345677 999998874 468999999998877 88888999988899999999999999986543 3589999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCC-------CCchhhHHHHHhh--
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPE-------NMKPSKLHLFMYG-- 183 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~-------~~~~~~~~~~~~~-- 183 (323)
+.++++++..+ +++|+||||||.+++.++..+ |++ ++++|++++...... ..........+..
T Consensus 84 l~~ll~~l~~~------~~~lvGhS~GG~i~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (281)
T 3fob_A 84 LHQLLEQLELQ------NVTLVGFSMGGGEVARYISTYGTDR-IEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGV 156 (281)
T ss_dssp HHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHH
T ss_pred HHHHHHHcCCC------cEEEEEECccHHHHHHHHHHccccc-eeEEEEecCCCcchhccccccccccchhHHHHHHHHh
Confidence 99999999754 899999999999888877765 787 999999986532110 0000000111000
Q ss_pred ------hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEe
Q 020633 184 ------LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 184 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~ 255 (323)
.+..+...+..... .... .............. . ............. .+....+.++++|+|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~ 228 (281)
T 3fob_A 157 INDRLAFLDEFTKGFFAAGD---RTDL-VSESFRLYNWDIAA---G-ASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIH 228 (281)
T ss_dssp HHHHHHHHHHHHHHHTCBTT---BCCS-SCHHHHHHHHHHHH---T-SCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred hhhHHHHHHHHHHHhccccc---cccc-chHHHHHHhhhhhc---c-cChHHHHHHHHHccccchhhhhhhcCCCEEEEe
Confidence 00011000000000 0000 01111100000000 0 0001111111111 112345788999999999
Q ss_pred eCCCcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 256 GTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 256 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|++|.++|.+.. +.+.+.+ +++++++++++||++++++|++ +.+.|.+||+
T Consensus 229 G~~D~~~p~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~~----~~~~i~~Fl~ 280 (281)
T 3fob_A 229 GDSDATVPFEYSGKLTHEAI--PNSKVALIKGGPHGLNATHAKE----FNEALLLFLK 280 (281)
T ss_dssp ETTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTHHHHTHHH----HHHHHHHHHC
T ss_pred cCCCCCcCHHHHHHHHHHhC--CCceEEEeCCCCCchhhhhHHH----HHHHHHHHhh
Confidence 999999999876 6666777 8899999999999999655554 9999999985
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-35 Score=225.52 Aligned_cols=239 Identities=22% Similarity=0.241 Sum_probs=167.8
Q ss_pred CCC-cEEEEEecCCC-CCcceEEEEecCCCCC--ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 38 PNG-KLFTQSFLPLD-QKVKATVYMTHGYGSD--TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
.+| +|+++.+.|.+ .+++|+||++||++++ .. .|..+++.|+++||+|+++|+||||.|+.... ..+++.+++|
T Consensus 8 ~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~d 85 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEER-HIVAVQETLNEIGVATLRADMYGHGKSDGKFE-DHTLFKWLTN 85 (251)
T ss_dssp ETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG-GCCHHHHHHH
T ss_pred cCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccc-cHHHHHHHHHHCCCEEEEecCCCCCCCCCccc-cCCHHHHHHH
Confidence 477 99999998864 2457899999999988 55 88999999999999999999999999986433 2478899999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+.++++++..... ..+++|+||||||.+++.+|.++|++ |+++|+++|...... . . ....+... .+.
T Consensus 86 ~~~~~~~l~~~~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~-----~-~--~~~~~~~~--~~~ 152 (251)
T 2wtm_A 86 ILAVVDYAKKLDF--VTDIYMAGHSQGGLSVMLAAAMERDI-IKALIPLSPAAMIPE-----I-A--RTGELLGL--KFD 152 (251)
T ss_dssp HHHHHHHHTTCTT--EEEEEEEEETHHHHHHHHHHHHTTTT-EEEEEEESCCTTHHH-----H-H--HHTEETTE--ECB
T ss_pred HHHHHHHHHcCcc--cceEEEEEECcchHHHHHHHHhCccc-ceEEEEECcHHHhHH-----H-H--hhhhhccc--cCC
Confidence 9999999975422 23899999999999999999999998 999999988642110 0 0 00000000 000
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
.............. ........... . .+....+.++++|+|+|+|++|.++|++.++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~-~-~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~ 214 (251)
T 2wtm_A 153 PENIPDELDAWDGR----------------KLKGNYVRVAQ-T-IRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQ 214 (251)
T ss_dssp TTBCCSEEEETTTE----------------EEETHHHHHHT-T-CCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred chhcchHHhhhhcc----------------ccchHHHHHHH-c-cCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHh
Confidence 00000000000000 00000000000 0 002233456899999999999999999999999988
Q ss_pred cCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 274 ASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 274 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ +++++++++++||.+ .++|+ ++.+.|.+||+++++
T Consensus 215 ~--~~~~~~~~~~~gH~~-~~~~~----~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 215 Y--KNCKLVTIPGDTHCY-DHHLE----LVTEAVKEFMLEQIA 250 (251)
T ss_dssp S--SSEEEEEETTCCTTC-TTTHH----HHHHHHHHHHHHHHC
T ss_pred C--CCcEEEEECCCCccc-chhHH----HHHHHHHHHHHHhcc
Confidence 8 789999999999998 65554 499999999988764
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=234.99 Aligned_cols=256 Identities=19% Similarity=0.243 Sum_probs=164.9
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++.+.+| +|+|..+++.+ +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.... .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~~~---~~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 76 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGPRD---GLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-GHDMDTYAA 76 (275)
T ss_dssp EEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEEccCCCEEEEEEcCCCC---CceEEEECCCCCchh-hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCC-CCCHHHHHH
Confidence 4667889 99999998643 578999999998877 89999999999999999999999999976432 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCC--C----chhhHHHHHhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPEN--M----KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~--~----~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+++.++.++ |++ |+++|++++....... . ........+....
T Consensus 77 dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
T 1a88_A 77 DVAALTEALDLR------GAVHIGHSTGGGEVARYVARAEPGR-VAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAAL 149 (275)
T ss_dssp HHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHSCTTS-EEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC------ceEEEEeccchHHHHHHHHHhCchh-eEEEEEecCCCcccccCccCcccCCHHHHHHHHHHH
Confidence 999999998744 899999999999999988876 888 9999999875322110 0 0000011110000
Q ss_pred h----hhhccccc-C-CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeC
Q 020633 186 F----GLADTWAA-M-PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 257 (323)
. .+...... . ....................... . .............. +....+.++++|+|+|+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 224 (275)
T 1a88_A 150 AANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM---M--GAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGT 224 (275)
T ss_dssp HHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEET
T ss_pred hhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhh---h--cchHhHHHHHhhhhhcccccccccCCCCEEEEecC
Confidence 0 00000000 0 00000000000011111100000 0 00001111111110 1123456789999999999
Q ss_pred CCcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 258 ADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|++.. +.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 225 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 274 (275)
T 1a88_A 225 DDQVVPYADAAPKSAELL--ANATLKSYEGLPHGMLSTHP----EVLNPDLLAFVK 274 (275)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHCH----HHHHHHHHHHHH
T ss_pred CCccCCcHHHHHHHHhhC--CCcEEEEcCCCCccHHHhCH----HHHHHHHHHHhh
Confidence 9999998844 4555666 78999999999999996555 459999999985
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=235.59 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=167.3
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+| +|+|..+++.+ .++|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.... .++++++++|+.+
T Consensus 9 ~~g~~l~y~~~g~~~-~~~~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl~~ 84 (266)
T 2xua_A 9 VNGTELHYRIDGERH-GNAPWIVLSNSLGTDLS-MWAPQVAALSKH-FRVLRYDTRGHGHSEAPKG-PYTIEQLTGDVLG 84 (266)
T ss_dssp CSSSEEEEEEESCSS-SCCCEEEEECCTTCCGG-GGGGGHHHHHTT-SEEEEECCTTSTTSCCCSS-CCCHHHHHHHHHH
T ss_pred ECCEEEEEEEcCCcc-CCCCeEEEecCccCCHH-HHHHHHHHHhcC-eEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHH
Confidence 477 99999998642 23689999999998887 899999999765 9999999999999986543 3589999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH--HHhhh-hhhhhccc-
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL--FMYGL-LFGLADTW- 192 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~- 192 (323)
+++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+... ..... ........
T Consensus 85 ~l~~l~~~------~~~lvGhS~Gg~va~~~A~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 155 (266)
T 2xua_A 85 LMDTLKIA------RANFCGLSMGGLTGVALAARHADR-IERVALCNTAARIGSP--EVWVPRAVKARTEGMHALADAVL 155 (266)
T ss_dssp HHHHTTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCSCH--HHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHhcCCC------ceEEEEECHHHHHHHHHHHhChhh-hheeEEecCCCCCCch--HHHHHHHHHHHhcChHHHHHHHH
Confidence 99998754 899999999999999999999999 9999999886543211 111100 00000 00000000
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
......... ...+.....+..... . .............. +....+.++++|+|+|+|++|.++|++.++.+
T Consensus 156 ~~~~~~~~~---~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~ 228 (266)
T 2xua_A 156 PRWFTADYM---EREPVVLAMIRDVFV---H-TDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGREL 228 (266)
T ss_dssp HHHSCHHHH---HHCHHHHHHHHHHHH---T-SCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHcCcccc---cCCHHHHHHHHHHHh---h-CCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHH
Confidence 000000000 001111111100000 0 00011111111111 12345778999999999999999999999999
Q ss_pred HHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 271 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.+ ++.++++++ +||++++++|+ ++.+.|.+||++
T Consensus 229 ~~~~--~~~~~~~~~-~gH~~~~e~p~----~~~~~i~~fl~~ 264 (266)
T 2xua_A 229 AQAI--AGARYVELD-ASHISNIERAD----AFTKTVVDFLTE 264 (266)
T ss_dssp HHHS--TTCEEEEES-CCSSHHHHTHH----HHHHHHHHHHTC
T ss_pred HHhC--CCCEEEEec-CCCCchhcCHH----HHHHHHHHHHHh
Confidence 9988 788999999 99999965554 499999999863
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=231.84 Aligned_cols=256 Identities=16% Similarity=0.199 Sum_probs=164.6
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++.+.+| +|+|..++. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~-----g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 74 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWGQ-----GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD-GYDFDTFAD 74 (274)
T ss_dssp EEECTTSCEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEEccCCCEEEEEecCC-----CceEEEECCCcchHH-HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCC-CCcHHHHHH
Confidence 4677889 999998873 468999999998877 89999999999999999999999999976433 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCC--CC----chhhHHHHHhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPE--NM----KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~--~~----~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+++.++.++ |++ |+++|++++...... .. ........+...+
T Consensus 75 dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (274)
T 1a8q_A 75 DLNDLLTDLDLR------DVTLVAHSMGGGELARYVGRHGTGR-LRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGV 147 (274)
T ss_dssp HHHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC------ceEEEEeCccHHHHHHHHHHhhhHh-eeeeeEecCCCccccccccCcccchHHHHHHHHHHh
Confidence 999999998643 899999999999999988876 888 999999987532110 00 0000111110000
Q ss_pred h----hhhccccc-CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCC
Q 020633 186 F----GLADTWAA-MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 186 ~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~ 258 (323)
. ........ ......................... .............. +....+.++++|+|+|+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 222 (274)
T 1a8q_A 148 LTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMA-----QTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDD 222 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTT-----SCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred hccHHHHHHHhcccccccccccccccHHHHHHHHHHhhh-----cChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCc
Confidence 0 00000000 0000000000011111111111000 01111111111111 12345678999999999999
Q ss_pred CcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|++.. +.+.+.+ +++++++++++||+++++ + +..+++.+.|.+||+
T Consensus 223 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-~-~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 223 DQVVPIDATGRKSAQII--PNAELKVYEGSSHGIAMV-P-GDKEKFNRDLLEFLN 273 (274)
T ss_dssp CSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTTTTS-T-THHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHhhC--CCceEEEECCCCCceecc-c-CCHHHHHHHHHHHhc
Confidence 999998854 4555666 789999999999999965 0 135569999999985
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=236.70 Aligned_cols=251 Identities=14% Similarity=0.153 Sum_probs=164.2
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +|+|..++. +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+... ..++++++++|+.
T Consensus 9 ~~~g~~l~y~~~g~-----g~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~a~dl~ 81 (277)
T 1brt_A 9 NSTSIDLYYEDHGT-----GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPT-TGYDYDTFAADLN 81 (277)
T ss_dssp TTEEEEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-SCCSHHHHHHHHH
T ss_pred cCCCcEEEEEEcCC-----CCeEEEECCCCCcHH-HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC-CCccHHHHHHHHH
Confidence 4577 999998873 356999999998877 8999999999989999999999999998654 3358999999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC-CceeEEEEccCcccCCCC--Cc-----hhhHHHHHhhhhhh
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVIPEN--MK-----PSKLHLFMYGLLFG 187 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~~~~~--~~-----~~~~~~~~~~~~~~ 187 (323)
++++++..+ +++|+||||||.+++.+|.++|+ + |+++|++++....... .. .......+......
T Consensus 82 ~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
T 1brt_A 82 TVLETLDLQ------DAVLVGFSTGTGEVARYVSSYGTAR-IAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA 154 (277)
T ss_dssp HHHHHHTCC------SEEEEEEGGGHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHH
T ss_pred HHHHHhCCC------ceEEEEECccHHHHHHHHHHcCcce-EEEEEEecCcCccccccccCccccccHHHHHHHHHHHhc
Confidence 999998744 89999999999999999999998 8 9999999875332110 00 00011111000000
Q ss_pred ----hhccccc-CCccc-ccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH-HHHHHhcCCCCCcCEEEEeeCCCc
Q 020633 188 ----LADTWAA-MPDNK-MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV-CQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 188 ----~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
....+.. ..... .................... ............ ..+....+.++++|+|+|+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 229 (277)
T 1brt_A 155 DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS-----GGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDR 229 (277)
T ss_dssp CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHH-----SCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCS
T ss_pred CchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhc-----cchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCc
Confidence 0000000 00000 00000000000000000000 000000000000 001123567889999999999999
Q ss_pred ccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 261 VTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|.+.+ +.+.+.+ +++++++++++||++++++|+ ++.+.|.+||+
T Consensus 230 ~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~ 276 (277)
T 1brt_A 230 TLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHAE----EVNTALLAFLA 276 (277)
T ss_dssp SSCGGGTHHHHHHHC--TTSEEEEETTCCTTHHHHTHH----HHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHC--CCCcEEEeCCCCcchhhhCHH----HHHHHHHHHHh
Confidence 9999888 8888888 789999999999999965554 58999999985
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=235.38 Aligned_cols=254 Identities=15% Similarity=0.113 Sum_probs=166.7
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH-HHHHHhhCCcEEEEecCCCCcCCCC--CcccCCChHHHh
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISFATWGYAVFAADLLGHGRSDG--IRCYLGDMEKVA 111 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~ 111 (323)
...+| +|+|..+++.+ +|+|||+||++++.. .|.. +++.|+++||+|+++|+||||.|+. .....+++++++
T Consensus 6 ~~~~g~~l~y~~~G~~~---~~~vvllHG~~~~~~-~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a 81 (298)
T 1q0r_A 6 VPSGDVELWSDDFGDPA---DPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 81 (298)
T ss_dssp EEETTEEEEEEEESCTT---SCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred eccCCeEEEEEeccCCC---CCeEEEEcCCCCCcc-chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHH
Confidence 34678 99999998643 579999999998877 7865 5689998899999999999999986 223346899999
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc-cCCC---------------CC--c
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF-VIPE---------------NM--K 173 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~-~~~~---------------~~--~ 173 (323)
+|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++.. .... .. .
T Consensus 82 ~dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
T 1q0r_A 82 ADAVAVLDGWGVD------RAHVVGLSMGATITQVIALDHHDR-LSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 154 (298)
T ss_dssp HHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred HHHHHHHHHhCCC------ceEEEEeCcHHHHHHHHHHhCchh-hheeEEecccCCCcccccchhhhhhhhhhhcccccc
Confidence 9999999998744 899999999999999999999999 99999998765 2100 00 0
Q ss_pred hhhHHHHHhhh------hhhhhcccccCCcccccc-cc-cCChHHH----HHHhcC--CCCcCCCCchhHHHHHHHHHHH
Q 020633 174 PSKLHLFMYGL------LFGLADTWAAMPDNKMVG-KA-IKDPEKL----KVIASN--PRRYTGKPRVGTMREIARVCQY 239 (323)
Q Consensus 174 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (323)
.......+... ........... ...... .. ....... ..+... ..... ..... .. ...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~-~~~~ 227 (298)
T 1q0r_A 155 QQPFLDALALMNQPAEGRAAEVAKRVSK-WRILSGTGVPFDDAEYARWEERAIDHAGGVLAEP----YAHYS-LT-LPPP 227 (298)
T ss_dssp CHHHHHHHHHHHSCCCSHHHHHHHHHHH-HHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCC----CGGGG-CC-CCCG
T ss_pred cHHHHHHHhccCcccccHHHHHHHHHHh-hhhccCCCCCCCHHHHHHHHHHHhhccCCccchh----hhhhh-hh-cCcc
Confidence 00001111000 00000000000 000000 00 0111111 111111 11110 00000 00 0001
Q ss_pred HHhc-CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 240 IQDN-FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 240 ~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.... +.++++|+|+|+|++|.++|++..+.+.+.+ +++++++++++|| +.|++ +.+.|.+||.++...
T Consensus 228 ~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH----e~p~~----~~~~i~~fl~~~~~~ 296 (298)
T 1q0r_A 228 SRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGH----ALPSS----VHGPLAEVILAHTRS 296 (298)
T ss_dssp GGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS--TTEEEEEETTCCS----SCCGG----GHHHHHHHHHHHHHH
T ss_pred cccccccccCCCEEEEEeCCCccCCHHHHHHHHHhC--CCCEEEEcCCCCC----CCcHH----HHHHHHHHHHHHhhc
Confidence 2345 7889999999999999999999999999888 7899999999999 55666 888899999877643
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=231.78 Aligned_cols=254 Identities=19% Similarity=0.223 Sum_probs=163.3
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++.+.+| +|+|..++. +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.... .++++++++
T Consensus 2 ~~~~~~g~~l~y~~~g~-----~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 74 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWGS-----GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-GNDMDTYAD 74 (273)
T ss_dssp EEECTTSCEEEEEEESC-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEecCCCcEEEEEEcCC-----CCEEEEECCCCCcHH-HHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC-CCCHHHHHH
Confidence 3567788 999998873 468999999998877 89999999999999999999999999976433 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCC---C---chhhHHHHHhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPEN---M---KPSKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~---~---~~~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++|+||||||.+++.++.++ |++ |+++|++++....... . ........+....
T Consensus 75 dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T 1a8s_A 75 DLAQLIEHLDLR------DAVLFGFSTGGGEVARYIGRHGTAR-VAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQAS 147 (273)
T ss_dssp HHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC------CeEEEEeChHHHHHHHHHHhcCchh-eeEEEEEcccCcccccCccccccCcHHHHHHHHHHh
Confidence 999999998643 899999999999999988776 888 9999999875321110 0 0000011110000
Q ss_pred h----hhhccccc--CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeC
Q 020633 186 F----GLADTWAA--MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 186 ~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 257 (323)
. .+...... ........................ . .............. +....+.++++|+|+|+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 222 (273)
T 1a8s_A 148 LADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM---A--AGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGD 222 (273)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH---H--SCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEET
T ss_pred HhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcc---c--cchhHHHHHHHHHhccChhhhhhcCCCCEEEEECC
Confidence 0 00000000 000000000000011111110000 0 00011111111111 1123467889999999999
Q ss_pred CCcccCchh-HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 258 ADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 258 ~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|.++|.+. .+.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 223 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 272 (273)
T 1a8s_A 223 ADQVVPIEASGIASAALV--KGSTLKIYSGAPHGLTDTHK----DQLNADLLAFIK 272 (273)
T ss_dssp TCSSSCSTTTHHHHHHHS--TTCEEEEETTCCSCHHHHTH----HHHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHhC--CCcEEEEeCCCCCcchhhCH----HHHHHHHHHHHh
Confidence 999999884 45555666 78999999999999996544 459999999985
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=232.28 Aligned_cols=255 Identities=14% Similarity=0.141 Sum_probs=165.7
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCC-Cccc-CCChHH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG-IRCY-LGDMEK 109 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~-~~~~-~~~~~~ 109 (323)
..+...+| +++|..+++.+ +|+|||+||++++....|..+++.|+ .+|+|+++|+||||.|+. +... .++++.
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~---~~~vvllHG~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVE---GPALFVLHGGPGGNAYVLREGLQDYL-EGFRVVYFDQRGSGRSLELPQDPRLFTVDA 80 (286)
T ss_dssp EEEEECSSCEEEEEEESCTT---SCEEEEECCTTTCCSHHHHHHHGGGC-TTSEEEEECCTTSTTSCCCCSCGGGCCHHH
T ss_pred eeEEeECCEEEEEEeecCCC---CCEEEEECCCCCcchhHHHHHHHHhc-CCCEEEEECCCCCCCCCCCccCcccCcHHH
Confidence 34455678 99999998743 67999999999775425888898885 479999999999999986 4331 468999
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH--------
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM-------- 181 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~-------- 181 (323)
+++|+.++++++..+ +++|+||||||.+|+.+|.++|+ |+++|++++....... ........
T Consensus 81 ~a~dl~~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~--v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~ 150 (286)
T 2yys_A 81 LVEDTLLLAEALGVE------RFGLLAHGFGAVVALEVLRRFPQ--AEGAILLAPWVNFPWL--AARLAEAAGLAPLPDP 150 (286)
T ss_dssp HHHHHHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHCTT--EEEEEEESCCCBHHHH--HHHHHHHTTCCCCSCH
T ss_pred HHHHHHHHHHHhCCC------cEEEEEeCHHHHHHHHHHHhCcc--hheEEEeCCccCcHHH--HHHHHHHhccccchhH
Confidence 999999999998643 89999999999999999999998 9999999986421100 00000000
Q ss_pred hhhhhhhhcccccCCccccccc--ccCCh--HHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEe
Q 020633 182 YGLLFGLADTWAAMPDNKMVGK--AIKDP--EKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~ 255 (323)
...+..... .......... ..... ............. ......... ...... +....+.++++|+|+|+
T Consensus 151 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lvi~ 225 (286)
T 2yys_A 151 EENLKEALK---REEPKALFDRLMFPTPRGRMAYEWLAEGAGIL-GSDAPGLAF-LRNGLWRLDYTPYLTPERRPLYVLV 225 (286)
T ss_dssp HHHHHHHHH---HSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCC-CCSHHHHHH-HHTTGGGCBCGGGCCCCSSCEEEEE
T ss_pred HHHHHHHhc---cCChHHHHHhhhccCCccccChHHHHHHHhhc-cccccchhh-cccccccCChhhhhhhcCCCEEEEE
Confidence 000000000 0000000000 00000 0000111100000 000001000 000000 12345788999999999
Q ss_pred eCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 256 GTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
|++|.+++.+ ++.+.+ + +++++++++++||++++++|+ ++++.|.+||++.
T Consensus 226 G~~D~~~~~~-~~~~~~-~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~ 276 (286)
T 2yys_A 226 GERDGTSYPY-AEEVAS-R--LRAPIRVLPEAGHYLWIDAPE----AFEEAFKEALAAL 276 (286)
T ss_dssp ETTCTTTTTT-HHHHHH-H--HTCCEEEETTCCSSHHHHCHH----HHHHHHHHHHHTT
T ss_pred eCCCCcCCHh-HHHHHh-C--CCCCEEEeCCCCCCcChhhHH----HHHHHHHHHHHhh
Confidence 9999999999 998988 8 789999999999999976654 4999999999864
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=222.21 Aligned_cols=243 Identities=17% Similarity=0.210 Sum_probs=173.7
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
+..+...+| +|+|+.++|.+ +++|+||++||++++. ...|..+++.|+++||.|+++|+||+|.|...... .++.+
T Consensus 23 ~~~~~~~~g~~l~~~~~~p~~-~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~ 100 (270)
T 3pfb_A 23 ATITLERDGLQLVGTREEPFG-EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFEN-MTVLN 100 (270)
T ss_dssp EEEEEEETTEEEEEEEEECSS-SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG-CCHHH
T ss_pred eEEEeccCCEEEEEEEEcCCC-CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCc-cCHHH
Confidence 333444577 99999999875 5689999999999773 22688999999999999999999999999865443 48899
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+++|+.++++++....+ ..+++|+|||+||.+++.++.++|++ |+++|+++|...... ........
T Consensus 101 ~~~d~~~~i~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~--------~~~~~~~~--- 166 (270)
T 3pfb_A 101 EIEDANAILNYVKTDPH--VRNIYLVGHAQGGVVASMLAGLYPDL-IKKVVLLAPAATLKG--------DALEGNTQ--- 166 (270)
T ss_dssp HHHHHHHHHHHHHTCTT--EEEEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCTHHHH--------HHHHTEET---
T ss_pred HHHhHHHHHHHHHhCcC--CCeEEEEEeCchhHHHHHHHHhCchh-hcEEEEeccccccch--------hhhhhhhh---
Confidence 99999999999976543 45899999999999999999999998 999999998754211 00000000
Q ss_pred cccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
....... ....... ................ ......+.++++|+++++|++|.++|.+.++.
T Consensus 167 -~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 228 (270)
T 3pfb_A 167 -GVTYNPD--HIPDRLP--------------FKDLTLGGFYLRIAQQ-LPIYEVSAQFTKPVCLIHGTDDTVVSPNASKK 228 (270)
T ss_dssp -TEECCTT--SCCSEEE--------------ETTEEEEHHHHHHHHH-CCHHHHHTTCCSCEEEEEETTCSSSCTHHHHH
T ss_pred -ccccCcc--ccccccc--------------ccccccchhHhhcccc-cCHHHHHhhCCccEEEEEcCCCCCCCHHHHHH
Confidence 0000000 0000000 0000000011111110 01335567889999999999999999999999
Q ss_pred HHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+ +++++++++++||.++ .+..+++.+.|.+||+++
T Consensus 229 ~~~~~--~~~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 229 YDQIY--QNSTLHLIEGADHCFS----DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp HHHHC--SSEEEEEETTCCTTCC----THHHHHHHHHHHHHHC--
T ss_pred HHHhC--CCCeEEEcCCCCcccC----ccchHHHHHHHHHHHhhc
Confidence 99988 7899999999999988 456677999999999875
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=229.23 Aligned_cols=247 Identities=14% Similarity=0.141 Sum_probs=163.4
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
...+| +++|...|. +++|||+||++.+.. ..|..+.+.|. ++|+|+++|+||||.|+......++++++++
T Consensus 10 ~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~ 83 (282)
T 1iup_A 10 ILAAGVLTNYHDVGE-----GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYNYSKDSWVD 83 (282)
T ss_dssp EEETTEEEEEEEECC-----SSEEEEECCCCTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCCCCHHHHHH
T ss_pred EEECCEEEEEEecCC-----CCeEEEECCCCCCccHHHHHHHHHHhhc-cCCEEEEECCCCCCCCCCCCCCCCCHHHHHH
Confidence 34567 999998873 468999999875432 25667777884 5799999999999999865533468999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh------hh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL------LF 186 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~------~~ 186 (323)
|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++........ .. ....... +.
T Consensus 84 dl~~~l~~l~~~------~~~lvGhS~GG~ia~~~A~~~P~~-v~~lvl~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 153 (282)
T 1iup_A 84 HIIGIMDALEIE------KAHIVGNAFGGGLAIATALRYSER-VDRMVLMGAAGTRFDVT-EG--LNAVWGYTPSIENMR 153 (282)
T ss_dssp HHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHSGGG-EEEEEEESCCCSCCCCC-HH--HHHHHTCCSCHHHHH
T ss_pred HHHHHHHHhCCC------ceEEEEECHhHHHHHHHHHHChHH-HHHHHeeCCccCCCCCC-HH--HHHHhcCCCcHHHHH
Confidence 999999998754 899999999999999999999999 99999999865422111 10 0000000 00
Q ss_pred hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH-----HHHHHH---HhcCCCCCcCEEEEeeCC
Q 020633 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-----RVCQYI---QDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~P~l~i~g~~ 258 (323)
.+....... .. ............... ..........+. ...+.. ...+.++++|+|+|+|++
T Consensus 154 ~~~~~~~~~--~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 223 (282)
T 1iup_A 154 NLLDIFAYD--RS----LVTDELARLRYEASI----QPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGRE 223 (282)
T ss_dssp HHHHHHCSS--GG----GCCHHHHHHHHHHHT----STTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred HHHHHhhcC--cc----cCCHHHHHHHHhhcc----ChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCC
Confidence 000000000 00 000011111110000 000000000000 000111 145678999999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
|.++|.+.++.+.+.+ ++.++++++++||++++++|+ ++.+.|.+||++.
T Consensus 224 D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~ 273 (282)
T 1iup_A 224 DQVVPLSSSLRLGELI--DRAQLHVFGRCGHWTQIEQTD----RFNRLVVEFFNEA 273 (282)
T ss_dssp CSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSHH----HHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHhC--CCCeEEEECCCCCCccccCHH----HHHHHHHHHHhcC
Confidence 9999999999999988 789999999999999966554 4999999999764
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-35 Score=229.19 Aligned_cols=252 Identities=15% Similarity=0.090 Sum_probs=166.7
Q ss_pred EEEcCC-CcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 34 YFETPN-GKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 34 ~~~~~~-g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
++...+ .+++|..+|++ ++|+|||+||++ ++.. .|..+++.|+++ |+|+++|+||||.|+......+++++
T Consensus 17 ~~~~~g~~~l~y~~~G~g---~~~~vvllHG~~pg~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~ 91 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVG---NDQTVVLLHGGGPGAASWT-NFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRY 91 (291)
T ss_dssp EEESSSEEEEEEEEECTT---CSSEEEEECCCCTTCCHHH-HTTTTHHHHTTT-SEEEEECCTTSTTSCCCSCCSSHHHH
T ss_pred EEEeCCcEEEEEEecCCC---CCCcEEEECCCCCccchHH-HHHHHHHHHHhc-CEEEEECCCCCCCCCCCCCCCcCHHH
Confidence 455555 48999988753 246999999997 5555 788888899876 99999999999999876543458999
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch--hhHHHHHhhhhh-
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SKLHLFMYGLLF- 186 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~- 186 (323)
+++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++.......... ............
T Consensus 92 ~a~dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 2wue_A 92 AAMALKGLFDQLGLG------RVPLVGNALGGGTAVRFALDYPAR-AGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164 (291)
T ss_dssp HHHHHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHSTTT-EEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCC------CeEEEEEChhHHHHHHHHHhChHh-hcEEEEECCCCCCccccccccchhhHHHHHHhcc
Confidence 999999999998754 899999999999999999999999 9999999986532211110 011111111100
Q ss_pred ----hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH--------HH--hcCCCCCcCEE
Q 020633 187 ----GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY--------IQ--DNFSKVTVPFL 252 (323)
Q Consensus 187 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~P~l 252 (323)
............ ................ . .......+...... .. ..+.++++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 234 (291)
T 2wue_A 165 PTRENLEAFLRVMVYD---KNLITPELVDQRFALA----S---TPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVL 234 (291)
T ss_dssp CCHHHHHHHHHTSCSS---GGGSCHHHHHHHHHHH----T---SHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEE
T ss_pred CCHHHHHHHHHHhccC---cccCCHHHHHHHHHHh----c---CchHHHHHHHHHhhccccccccchhHHHHhhCCCCeE
Confidence 000000000000 0000011111111100 0 00111111111000 11 45778899999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|+|++|.++|.+.++.+.+.+ +++++++++++||++++++|+ ++.+.|.+||++
T Consensus 235 vi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 289 (291)
T 2wue_A 235 LIWGREDRVNPLDGALVALKTI--PRAQLHVFGQCGHWVQVEKFD----EFNKLTIEFLGG 289 (291)
T ss_dssp EEEETTCSSSCGGGGHHHHHHS--TTEEEEEESSCCSCHHHHTHH----HHHHHHHHHTTC
T ss_pred EEecCCCCCCCHHHHHHHHHHC--CCCeEEEeCCCCCChhhhCHH----HHHHHHHHHHhc
Confidence 9999999999999999999988 789999999999999965554 489999999853
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=235.13 Aligned_cols=262 Identities=13% Similarity=0.111 Sum_probs=166.5
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCC-cceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCc---ccC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQK-VKATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIR---CYL 104 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~-~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~---~~~ 104 (323)
++.++.. +| +++|..+++.+++ ++++|||+||++++.. .|......|++ .||+|+++|+||||.|+..+ ...
T Consensus 29 ~~~~v~~-~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~-~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~ 106 (330)
T 3nwo_A 29 SSRTVPF-GDHETWVQVTTPENAQPHALPLIVLHGGPGMAH-NYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADF 106 (330)
T ss_dssp CEEEEEE-TTEEEEEEEECCSSCCTTCCCEEEECCTTTCCS-GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGG
T ss_pred cceeEee-cCcEEEEEEecCccCCCCCCcEEEECCCCCCch-hHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCcccc
Confidence 4444444 66 9999999985312 2458999999988776 66666777775 58999999999999997521 233
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++++.+++|+.++++.+..+ +++|+||||||.+|+.+|.++|++ |+++|++++........ .....+...
T Consensus 107 ~~~~~~a~dl~~ll~~lg~~------~~~lvGhSmGG~va~~~A~~~P~~-v~~lvl~~~~~~~~~~~---~~~~~~~~~ 176 (330)
T 3nwo_A 107 WTPQLFVDEFHAVCTALGIE------RYHVLGQSWGGMLGAEIAVRQPSG-LVSLAICNSPASMRLWS---EAAGDLRAQ 176 (330)
T ss_dssp CCHHHHHHHHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHTCCTT-EEEEEEESCCSBHHHHH---HHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCC------ceEEEecCHHHHHHHHHHHhCCcc-ceEEEEecCCcchHHHH---HHHHHHHHh
Confidence 58899999999999999754 899999999999999999999999 99999998764321000 000000000
Q ss_pred hhh-hhcccccCCcccccccccCChHH----HHHHhcCCCCcCCCCchhHHHHHHHHH----------------------
Q 020633 185 LFG-LADTWAAMPDNKMVGKAIKDPEK----LKVIASNPRRYTGKPRVGTMREIARVC---------------------- 237 (323)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 237 (323)
+.. ........ ........... ...+.......... ...........
T Consensus 177 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 3nwo_A 177 LPAETRAALDRH----EAAGTITHPDYLQAAAEFYRRHVCRVVPT--PQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTL 250 (330)
T ss_dssp SCHHHHHHHHHH----HHHTCTTSHHHHHHHHHHHHHHTCCSSSC--CHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGG
T ss_pred cCHHHHHHHHHH----HhccCCCCHHHHHHHHHHHHHhhccccCC--CHHHHHHHHhhccchhhhhcccCchhhhhhccc
Confidence 000 00000000 00000000000 00011000000000 00000000000
Q ss_pred --HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 238 --QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 238 --~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+....+.+|++|+|+|+|++|.++| ...+.+.+.+ +++++++++++||++++|+|++ +.+.|.+||+++.
T Consensus 251 ~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~i--p~~~~~~i~~~gH~~~~e~p~~----~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 251 GDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI--PDVRSHVFPGTSHCTHLEKPEE----FRAVVAQFLHQHD 323 (330)
T ss_dssp GGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHC--SSEEEEEETTCCTTHHHHSHHH----HHHHHHHHHHHHH
T ss_pred cCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhC--CCCcEEEeCCCCCchhhcCHHH----HHHHHHHHHHhcc
Confidence 00134567889999999999999876 4677888888 8899999999999999766654 9999999998875
Q ss_pred hh
Q 020633 316 ER 317 (323)
Q Consensus 316 ~~ 317 (323)
..
T Consensus 324 ~~ 325 (330)
T 3nwo_A 324 LA 325 (330)
T ss_dssp HH
T ss_pred cc
Confidence 43
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=230.43 Aligned_cols=268 Identities=15% Similarity=0.147 Sum_probs=171.2
Q ss_pred ccceeEEEcCCC--cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCC
Q 020633 29 RNGKKYFETPNG--KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 106 (323)
+.+...+...++ +++|...++.+ +++|+|||+||++++.. .|..+++.|.++||.|+++|+||||.|........+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 96 (315)
T 4f0j_A 19 PVHYLDFTSQGQPLSMAYLDVAPKK-ANGRTILLMHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYS 96 (315)
T ss_dssp CCEEEEEEETTEEEEEEEEEECCSS-CCSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCC
T ss_pred cceeEEEecCCCCeeEEEeecCCCC-CCCCeEEEEcCCCCcch-HHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccC
Confidence 344555555444 66776666544 66899999999998887 899999999999999999999999999876655568
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC---chhhHHHHHhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM---KPSKLHLFMYG 183 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~---~~~~~~~~~~~ 183 (323)
++++++|+.++++.+..+ +++++|||+||.+++.++.++|++ |+++|+++|........ ...........
T Consensus 97 ~~~~~~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
T 4f0j_A 97 FQQLAANTHALLERLGVA------RASVIGHSMGGMLATRYALLYPRQ-VERLVLVNPIGLEDWKALGVPWRSVDDWYRR 169 (315)
T ss_dssp HHHHHHHHHHHHHHTTCS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCSSCHHHHTCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCC------ceEEEEecHHHHHHHHHHHhCcHh-hheeEEecCcccCCcccccchhhhhHHHHhh
Confidence 999999999999987643 899999999999999999999998 99999999864221000 00000000000
Q ss_pred hhhhhhcccccCCcccccccccC--ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH-----HHHhcCCCCCcCEEEEee
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIK--DPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-----YIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~l~i~g 256 (323)
....................... ............. ................ .....+.++++|+|+++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G 246 (315)
T 4f0j_A 170 DLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYR---GKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIG 246 (315)
T ss_dssp HTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTT---STTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEE
T ss_pred cccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhh---ccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEe
Confidence 00000000000000000000000 0000011100000 0000000000000000 123457788999999999
Q ss_pred CCCcccC----------------chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 257 TADGVTC----------------PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 257 ~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++|.++| .+..+.+.+.+ +++++++++++||+.++++| +++.+.|.+||+++
T Consensus 247 ~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 247 EKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI--PQATLVEFPDLGHTPQIQAP----ERFHQALLEGLQTQ 314 (315)
T ss_dssp TTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHS--TTEEEEEETTCCSCHHHHSH----HHHHHHHHHHHCC-
T ss_pred cCCCcCccccccccccccccccchhhhhHHHhhc--CCceEEEeCCCCcchhhhCH----HHHHHHHHHHhccC
Confidence 9999999 66677888877 78999999999999996544 55999999998653
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=223.66 Aligned_cols=252 Identities=13% Similarity=0.094 Sum_probs=164.0
Q ss_pred ceeEEEcCCC-cEEEEEecCCCC--CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccCCC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~ 106 (323)
+...+.+.+| +|+|+.+++... +++|+||++||++++.. .|..+++.|+++||+|+++|+||| |.|++... .++
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~-~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~-~~~ 85 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSID-EFT 85 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC---------CCC
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCch-HHHHHHHHHHHCCCEEEEeeCCCCCCCCCCccc-cee
Confidence 4567888899 999999987531 35789999999998887 899999999989999999999999 99976433 348
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++.+++|+.++++++... + ..+++|+||||||.+|+.+|.+ | + |+++|++++..... . ........ .
T Consensus 86 ~~~~~~D~~~~~~~l~~~-~--~~~~~lvGhSmGG~iA~~~A~~-~-~-v~~lvl~~~~~~~~-----~-~~~~~~~~-~ 152 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTK-G--TQNIGLIAASLSARVAYEVISD-L-E-LSFLITAVGVVNLR-----D-TLEKALGF-D 152 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--CCCEEEEEETHHHHHHHHHTTT-S-C-CSEEEEESCCSCHH-----H-HHHHHHSS-C
T ss_pred hHHHHHHHHHHHHHHHhC-C--CCceEEEEECHHHHHHHHHhCc-c-C-cCEEEEecCchhHH-----H-HHHHHhhh-h
Confidence 899999999999998632 2 4589999999999999999998 6 6 99999987643210 0 00000000 0
Q ss_pred hhhcccccCCcc-cccccccC-ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc
Q 020633 187 GLADTWAAMPDN-KMVGKAIK-DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 187 ~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
............ ........ ............ .........+.++++|+|+|+|++|.++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 216 (305)
T 1tht_A 153 YLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHW----------------DTLDSTLDKVANTSVPLIAFTANNDDWVKQ 216 (305)
T ss_dssp GGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTC----------------SSHHHHHHHHTTCCSCEEEEEETTCTTSCH
T ss_pred hhhcchhhCcccccccccccCHHHHHHHHHhccc----------------cchhhHHHHHhhcCCCEEEEEeCCCCccCH
Confidence 000000000000 00000000 000000000000 000112345678999999999999999999
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.++.+.+.+..+++++++++++||.++ ++|+. ..++.+.+.+|.....
T Consensus 217 ~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~-~~~fl~~~~~~~~~~~ 265 (305)
T 1tht_A 217 EEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV-LRNFYQSVTKAAIAMD 265 (305)
T ss_dssp HHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchH-HHHHHHHHHHHHHHhC
Confidence 9999998887556789999999999986 76653 4445566666655443
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=229.57 Aligned_cols=251 Identities=16% Similarity=0.163 Sum_probs=162.7
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..+| +|+|..++. +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.... .++++++++|+.
T Consensus 9 ~~~g~~l~y~~~g~-----~~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl~ 81 (279)
T 1hkh_A 9 NSTPIELYYEDQGS-----GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNT-GYDYDTFAADLH 81 (279)
T ss_dssp TTEEEEEEEEEESS-----SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHHH
T ss_pred CCCCeEEEEEecCC-----CCcEEEEcCCCchhh-HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC-CCCHHHHHHHHH
Confidence 4567 899988863 357999999998877 89999999999999999999999999986543 358999999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC-CceeEEEEccCcccCCCC--Cc----hhhHHHHHhhhhhh-
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVIPEN--MK----PSKLHLFMYGLLFG- 187 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~~~~~--~~----~~~~~~~~~~~~~~- 187 (323)
++++++..+ +++|+||||||.+++.+|.++|+ + |+++|++++....... .. .......+......
T Consensus 82 ~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (279)
T 1hkh_A 82 TVLETLDLR------DVVLVGFSMGTGELARYVARYGHER-VAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGD 154 (279)
T ss_dssp HHHHHHTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHhcCCC------ceEEEEeChhHHHHHHHHHHcCccc-eeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhh
Confidence 999998743 89999999999999999999998 7 9999999875332110 00 00001100000000
Q ss_pred ---hhccccc--CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-HHHHhcCCCC---CcCEEEEeeCC
Q 020633 188 ---LADTWAA--MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQDNFSKV---TVPFLTVHGTA 258 (323)
Q Consensus 188 ---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~P~l~i~g~~ 258 (323)
....... ......................... . ............ .+....+.++ ++|+|+|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~ 229 (279)
T 1hkh_A 155 RFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIG---S--APVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTK 229 (279)
T ss_dssp HHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHT---S--CTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETT
T ss_pred hhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhcc---C--cHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCC
Confidence 0000000 0000000000000111110000000 0 000000000000 0012234556 89999999999
Q ss_pred CcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|.+.+ +.+.+.+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 230 D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~ 278 (279)
T 1hkh_A 230 DNILPIDATARRFHQAV--PEADYVEVEGAPHGLLWTHA----DEVNAALKTFLA 278 (279)
T ss_dssp CSSSCTTTTHHHHHHHC--TTSEEEEETTCCTTHHHHTH----HHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHhC--CCeeEEEeCCCCccchhcCH----HHHHHHHHHHhh
Confidence 999999887 8888888 78999999999999996555 459999999985
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=232.21 Aligned_cols=249 Identities=13% Similarity=0.099 Sum_probs=165.4
Q ss_pred eEEEcC--C---CcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHH-HHHhhCCcEEEEecCCCCcCCCCCccc
Q 020633 33 KYFETP--N---GKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKIC-ISFATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 33 ~~~~~~--~---g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
.++... + .+++|..+++ +++|||+||++ ++.. .|..++ +.|+++ |+|+++|+||||.|+.....
T Consensus 11 ~~~~~~~~g~~~~~l~y~~~G~-----g~~vvllHG~~~~~~~~~-~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~ 83 (286)
T 2puj_A 11 KFVKINEKGFSDFNIHYNEAGN-----GETVIMLHGGGPGAGGWS-NYYRNVGPFVDAG-YRVILKDSPGFNKSDAVVMD 83 (286)
T ss_dssp EEEEECSTTCSSEEEEEEEECC-----SSEEEEECCCSTTCCHHH-HHTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCS
T ss_pred eEEEecCCCcceEEEEEEecCC-----CCcEEEECCCCCCCCcHH-HHHHHHHHHHhcc-CEEEEECCCCCCCCCCCCCc
Confidence 345555 4 4788888764 46899999997 5555 788888 889876 99999999999999866543
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc--hhhHHHHH
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSKLHLFM 181 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~--~~~~~~~~ 181 (323)
.++++++++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++......... ........
T Consensus 84 ~~~~~~~a~dl~~~l~~l~~~------~~~lvGhS~GG~va~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T 2puj_A 84 EQRGLVNARAVKGLMDALDID------RAHLVGNAMGGATALNFALEYPDR-IGKLILMGPGGLGPSMFAPMPMEGIKLL 156 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCCCCCSSSCSSCHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHhCCC------ceEEEEECHHHHHHHHHHHhChHh-hheEEEECccccCCCcccccchhhHHHH
Confidence 458999999999999998754 899999999999999999999999 999999998653221111 00011111
Q ss_pred hhhhh--------hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-------HHHHhcCCC
Q 020633 182 YGLLF--------GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-------QYIQDNFSK 246 (323)
Q Consensus 182 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 246 (323)
..... ......... . ................ . .......+.... .+....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 224 (286)
T 2puj_A 157 FKLYAEPSYETLKQMLQVFLYD--Q----SLITEELLQGRWEAIQ----R--QPEHLKNFLISAQKAPLSTWDVTARLGE 224 (286)
T ss_dssp HHHHHSCCHHHHHHHHHHHCSC--G----GGCCHHHHHHHHHHHH----H--CHHHHHHHHHHHHHSCGGGGCCGGGGGG
T ss_pred HHHhhCCcHHHHHHHHHHHhcC--C----ccCCHHHHHHHHHHhh----c--CHHHHHHHHHHHhhhhccccchhhHHhh
Confidence 11000 000000000 0 0000000110000000 0 000011111100 012345678
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||+.++++|+ ++.+.|.+||++
T Consensus 225 i~~P~Lii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 285 (286)
T 2puj_A 225 IKAKTFITWGRDDRFVPLDHGLKLLWNI--DDARLHVFSKCGAWAQWEHAD----EFNRLVIDFLRH 285 (286)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHS--SSEEEEEESSCCSCHHHHTHH----HHHHHHHHHHHH
T ss_pred cCCCEEEEEECCCCccCHHHHHHHHHHC--CCCeEEEeCCCCCCccccCHH----HHHHHHHHHHhc
Confidence 8999999999999999999999999988 789999999999999966554 499999999964
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=228.29 Aligned_cols=264 Identities=14% Similarity=0.115 Sum_probs=175.9
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+..++.. +| +|+|..+++ +|+|||+||++++.. .|..+++.|..+||+|+++|+||||.|+.... ..+++
T Consensus 9 ~~~~~~~~-~g~~l~~~~~g~-----~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~-~~~~~ 80 (309)
T 3u1t_A 9 FAKRTVEV-EGATIAYVDEGS-----GQPVLFLHGNPTSSY-LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDI-EYRLQ 80 (309)
T ss_dssp CCCEEEEE-TTEEEEEEEEEC-----SSEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCSS-CCCHH
T ss_pred ccceEEEE-CCeEEEEEEcCC-----CCEEEEECCCcchhh-hHHHHHHHHHhCCCEEEEEccCCCCCCCCCCc-ccCHH
Confidence 34444544 66 999999875 469999999998877 88899999777899999999999999987554 45899
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch--hh--HHHHHhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SK--LHLFMYGL 184 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~--~~--~~~~~~~~ 184 (323)
++++|+.++++++.. .+++|+|||+||.+++.+|.++|++ |+++|++++.......... .+ ........
T Consensus 81 ~~~~~~~~~~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (309)
T 3u1t_A 81 DHVAYMDGFIDALGL------DDMVLVIHDWGSVIGMRHARLNPDR-VAAVAFMEALVPPALPMPSYEAMGPQLGPLFRD 153 (309)
T ss_dssp HHHHHHHHHHHHHTC------CSEEEEEEEHHHHHHHHHHHHCTTT-EEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC------CceEEEEeCcHHHHHHHHHHhChHh-heEEEEeccCCCCccccccccccchhhhHHHHH
Confidence 999999999999864 3899999999999999999999999 9999999987554311110 00 00001000
Q ss_pred hhhh-hcccccCCcc----cc-----cccccCChHHHHHHhcCCCCcCCCCchhHHHH-------------HHHHHHHHH
Q 020633 185 LFGL-ADTWAAMPDN----KM-----VGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE-------------IARVCQYIQ 241 (323)
Q Consensus 185 ~~~~-~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 241 (323)
+... .......... .+ ..... .......+...... ......... ......+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
T 3u1t_A 154 LRTADVGEKMVLDGNFFVETILPEMGVVRSL-SEAEMAAYRAPFPT---RQSRLPTLQWPREVPIGGEPAFAEAEVLKNG 229 (309)
T ss_dssp HTSTTHHHHHHTTTCHHHHTHHHHTSCSSCC-CHHHHHHHHTTCCS---TGGGHHHHHHHHHSCBTTBSHHHHHHHHHHH
T ss_pred HhccchhhhhccccceehhhhcccccccccC-CHHHHHHHHHhcCC---ccccchHHHHHHHhccccccchhhhhhhhhh
Confidence 0000 0000000000 00 00001 11111111111100 000011111 111112234
Q ss_pred hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
..+.++++|+|+|+|++|.++|.+..+.+.+.+ ++.++++++++||++++++| +++.+.|.+||+++....
T Consensus 230 ~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 230 EWLMASPIPKLLFHAEPGALAPKPVVDYLSENV--PNLEVRFVGAGTHFLQEDHP----HLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp HHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCHHHHCH----HHHHHHHHHHHHHHCCCC
T ss_pred hhcccCCCCEEEEecCCCCCCCHHHHHHHHhhC--CCCEEEEecCCcccchhhCH----HHHHHHHHHHHHhcchhh
Confidence 556778999999999999999999999999998 77888999999999996544 559999999999986543
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=224.18 Aligned_cols=250 Identities=15% Similarity=0.136 Sum_probs=164.3
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
..+...+| +++|..+++.+ .|+|||+||++ ++.. .|..+++.|++. |+|+++|+||||.|.......++++
T Consensus 9 ~~~~~~~g~~l~y~~~g~~g---~p~vvllHG~~~~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~ 83 (285)
T 1c4x_A 9 EKRFPSGTLASHALVAGDPQ---SPAVVLLHGAGPGAHAAS-NWRPIIPDLAEN-FFVVAPDLIGFGQSEYPETYPGHIM 83 (285)
T ss_dssp EEEECCTTSCEEEEEESCTT---SCEEEEECCCSTTCCHHH-HHGGGHHHHHTT-SEEEEECCTTSTTSCCCSSCCSSHH
T ss_pred ceEEEECCEEEEEEecCCCC---CCEEEEEeCCCCCCcchh-hHHHHHHHHhhC-cEEEEecCCCCCCCCCCCCcccchh
Confidence 33445577 99999987432 35599999997 4444 788888889776 9999999999999986554345899
Q ss_pred HH----hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 109 KV----AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 109 ~~----~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
++ ++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++........... .......
T Consensus 84 ~~~~~~~~dl~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~--~~~~~~~ 154 (285)
T 1c4x_A 84 SWVGMRVEQILGLMNHFGIE------KSHIVGNSMGGAVTLQLVVEAPER-FDKVALMGSVGAPMNARPPE--LARLLAF 154 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCSSCCHH--HHHHHTG
T ss_pred hhhhhHHHHHHHHHHHhCCC------ccEEEEEChHHHHHHHHHHhChHH-hheEEEeccCCCCCCccchh--HHHHHHH
Confidence 99 99999999998743 899999999999999999999998 99999999865422211110 1111110
Q ss_pred hh--------hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-------H---HHHhcCCC
Q 020633 185 LF--------GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-------Q---YIQDNFSK 246 (323)
Q Consensus 185 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~ 246 (323)
+. ......... ..... ............. . .......+.... . .....+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (285)
T 1c4x_A 155 YADPRLTPYRELIHSFVYD--PENFP--GMEEIVKSRFEVA----N---DPEVRRIQEVMFESMKAGMESLVIPPATLGR 223 (285)
T ss_dssp GGSCCHHHHHHHHHTTSSC--STTCT--THHHHHHHHHHHH----H---CHHHHHHHHHHHHHHSSCCGGGCCCHHHHTT
T ss_pred hccccHHHHHHHHHHhhcC--ccccc--CcHHHHHHHHHhc----c---CHHHHHHHHHHhccccccccccccchhhhcc
Confidence 00 000000000 00000 0000000000000 0 000000000000 0 01134567
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||++++++|+ ++.+.|.+||.+
T Consensus 224 i~~P~lii~G~~D~~~p~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 284 (285)
T 1c4x_A 224 LPHDVLVFHGRQDRIVPLDTSLYLTKHL--KHAELVVLDRCGHWAQLERWD----AMGPMLMEHFRA 284 (285)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHC--SSEEEEEESSCCSCHHHHSHH----HHHHHHHHHHHC
T ss_pred CCCCEEEEEeCCCeeeCHHHHHHHHHhC--CCceEEEeCCCCcchhhcCHH----HHHHHHHHHHhc
Confidence 8999999999999999999999999988 789999999999999965554 489999999863
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=217.47 Aligned_cols=233 Identities=15% Similarity=0.126 Sum_probs=157.1
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCC---hHHHhh
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD---MEKVAA 112 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~---~~~~~~ 112 (323)
..+| +|+|..++++ .++|||+||++++....|..+++.|.++||+|+++|+||||.|+.... .++ +++.++
T Consensus 8 ~~~g~~l~~~~~g~~----~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~ 82 (254)
T 2ocg_A 8 AVNGVQLHYQQTGEG----DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDR-DFPADFFERDAK 82 (254)
T ss_dssp EETTEEEEEEEEECC----SEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCC-CCCTTHHHHHHH
T ss_pred EECCEEEEEEEecCC----CCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCC-CCChHHHHHHHH
Confidence 3477 9999988753 468999999987733268889999998899999999999999975432 234 666777
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
|+.++++.+.. .+++|+||||||.+|+.+|.++|++ |+++|++++...... .... ....+.... .+
T Consensus 83 ~~~~~l~~l~~------~~~~l~GhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~-----~~~~-~~~~~~~~~-~~ 148 (254)
T 2ocg_A 83 DAVDLMKALKF------KKVSLLGWSDGGITALIAAAKYPSY-IHKMVIWGANAYVTD-----EDSM-IYEGIRDVS-KW 148 (254)
T ss_dssp HHHHHHHHTTC------SSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSBCCH-----HHHH-HHHTTSCGG-GS
T ss_pred HHHHHHHHhCC------CCEEEEEECHhHHHHHHHHHHChHH-hhheeEeccccccCh-----hhHH-HHHHHHHHH-HH
Confidence 88888877653 3899999999999999999999999 999999987543221 0000 000000000 00
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH---------HHhcCCCCCcCEEEEeeCCCcccC
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY---------IQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
........... +...........+...... ....+.++++|+|+|+|++|.++|
T Consensus 149 --------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 211 (254)
T 2ocg_A 149 --------------SERTRKPLEAL---YGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP 211 (254)
T ss_dssp --------------CHHHHHHHHHH---HCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSC
T ss_pred --------------HHHhHHHHHHH---hcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCC
Confidence 00000000000 0000000000000000000 124567889999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
.+.++.+.+.+ ++.++++++++||+.++++| +++.+.|.+||
T Consensus 212 ~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl 253 (254)
T 2ocg_A 212 RFHADFIHKHV--KGSRLHLMPEGKHNLHLRFA----DEFNKLAEDFL 253 (254)
T ss_dssp HHHHHHHHHHS--TTCEEEEETTCCTTHHHHTH----HHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCCEEEEcCCCCCchhhhCH----HHHHHHHHHHh
Confidence 99999999988 78999999999999996554 45889999987
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=228.93 Aligned_cols=128 Identities=14% Similarity=0.210 Sum_probs=106.9
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC--c-cc
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--R-CY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~-~~ 103 (323)
+...+..+...+| +++|..++. +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.. . ..
T Consensus 8 ~~~~~~~~~~~~g~~l~y~~~G~-----g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~ 81 (328)
T 2cjp_A 8 MKKIEHKMVAVNGLNMHLAELGE-----GPTILFIHGFPELWY-SWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPS 81 (328)
T ss_dssp -CCCEEEEEEETTEEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGG
T ss_pred HhhhheeEecCCCcEEEEEEcCC-----CCEEEEECCCCCchH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcc
Confidence 3344455566688 999998873 479999999998877 899999999888999999999999999765 2 22
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.++++++++|+.++++++... ..+++|+||||||.+|+.+|.++|++ |+++|++++..
T Consensus 82 ~~~~~~~a~dl~~~l~~l~~~----~~~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvl~~~~~ 139 (328)
T 2cjp_A 82 KFSILHLVGDVVALLEAIAPN----EEKVFVVAHDWGALIAWHLCLFRPDK-VKALVNLSVHF 139 (328)
T ss_dssp GGSHHHHHHHHHHHHHHHCTT----CSSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCC
T ss_pred cccHHHHHHHHHHHHHHhcCC----CCCeEEEEECHHHHHHHHHHHhChhh-eeEEEEEccCC
Confidence 358999999999999999721 23899999999999999999999999 99999998653
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-34 Score=224.06 Aligned_cols=253 Identities=11% Similarity=0.063 Sum_probs=159.9
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc----CCChH
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY----LGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~ 108 (323)
.+...+| +|+|...|. +++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+ .. .++++
T Consensus 12 ~~~~~~g~~l~y~~~G~-----g~~lvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~~~~~~~~~ 83 (294)
T 1ehy_A 12 YEVQLPDVKIHYVREGA-----GPTLLLLHGWPGFWW-EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLNDLSKYSLD 83 (294)
T ss_dssp EEEECSSCEEEEEEEEC-----SSEEEEECCSSCCGG-GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CTTCGGGGCHH
T ss_pred eEEEECCEEEEEEEcCC-----CCEEEEECCCCcchh-hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-ccccccCcCHH
Confidence 3445577 999998873 479999999998877 899999999887 99999999999999875 31 35899
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc-CCCCCch------hhHHHHH
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV-IPENMKP------SKLHLFM 181 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~-~~~~~~~------~~~~~~~ 181 (323)
++++|+.+++++++.+ +++|+||||||.+|+.+|.++|++ |+++|++++... ....... .+.....
T Consensus 84 ~~a~dl~~ll~~l~~~------~~~lvGhS~Gg~va~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T 1ehy_A 84 KAADDQAALLDALGIE------KAYVVGHDFAAIVLHKFIRKYSDR-VIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFH 156 (294)
T ss_dssp HHHHHHHHHHHHTTCC------CEEEEEETHHHHHHHHHHHHTGGG-EEEEEEECCSCTTC-----------CCHHHHHT
T ss_pred HHHHHHHHHHHHcCCC------CEEEEEeChhHHHHHHHHHhChhh-eeEEEEecCCCCCcchhhccchhccCceEEEec
Confidence 9999999999998754 899999999999999999999999 999999996432 1100000 0000000
Q ss_pred hhhhhh-hhcccc---cCCccccc------ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-HHHHh-----cCC
Q 020633 182 YGLLFG-LADTWA---AMPDNKMV------GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-QYIQD-----NFS 245 (323)
Q Consensus 182 ~~~~~~-~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~ 245 (323)
...+.. ...... ......+. ................. ............... ..... .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (294)
T 1ehy_A 157 QLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCM----KPDNIHGGFNYYRANIRPDAALWTDLDHT 232 (294)
T ss_dssp TCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHT----STTHHHHHHHHHHHHSSSSCCCCCTGGGS
T ss_pred CcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhc----CCcccchHHHHHHHHHhhhhhhcCCcccC
Confidence 000000 000000 00000000 00000000111110000 000000000111110 00001 233
Q ss_pred CCCcCEEEEeeCCCcccCc-hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 246 KVTVPFLTVHGTADGVTCP-TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++++|+|+|+|++|.++|. +..+.+.+.+ +++++++++++||++++++|++ +++.|.+||
T Consensus 233 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl 293 (294)
T 1ehy_A 233 MSDLPVTMIWGLGDTCVPYAPLIEFVPKYY--SNYTMETIEDCGHFLMVEKPEI----AIDRIKTAF 293 (294)
T ss_dssp CBCSCEEEEEECCSSCCTTHHHHHHHHHHB--SSEEEEEETTCCSCHHHHCHHH----HHHHHHHHC
T ss_pred cCCCCEEEEEeCCCCCcchHHHHHHHHHHc--CCCceEEeCCCCCChhhhCHHH----HHHHHHHHh
Confidence 7899999999999999884 5667777777 7899999999999999766655 888888886
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=230.62 Aligned_cols=268 Identities=16% Similarity=0.118 Sum_probs=173.8
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 106 (323)
++.+..++.. +| +++|..+++++ +|+|||+||++++.. .|..+.+.|+ +||+|+++|+||||.|+.... ..+
T Consensus 8 ~~~~~~~~~~-~g~~l~~~~~g~~~---~~~vl~lHG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~ 80 (299)
T 3g9x_A 8 FPFDPHYVEV-LGERMHYVDVGPRD---GTPVLFLHGNPTSSY-LWRNIIPHVA-PSHRCIAPDLIGMGKSDKPDL-DYF 80 (299)
T ss_dssp CCCCCEEEEE-TTEEEEEEEESCSS---SCCEEEECCTTCCGG-GGTTTHHHHT-TTSCEEEECCTTSTTSCCCCC-CCC
T ss_pred cccceeeeee-CCeEEEEEecCCCC---CCEEEEECCCCccHH-HHHHHHHHHc-cCCEEEeeCCCCCCCCCCCCC-ccc
Confidence 4445555555 66 99999998754 679999999998877 8888999996 479999999999999987654 458
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++++|+.++++++.. .+++++|||+||.+++.+|.++|++ |+++|++++....................+.
T Consensus 81 ~~~~~~~~~~~~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
T 3g9x_A 81 FDDHVRYLDAFIEALGL------EEVVLVIHDWGSALGFHWAKRNPER-VKGIACMEFIRPFPTWDEWPEFARETFQAFR 153 (299)
T ss_dssp HHHHHHHHHHHHHHTTC------CSEEEEEEHHHHHHHHHHHHHSGGG-EEEEEEEEECCCBSSGGGSCGGGHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCC------CcEEEEEeCccHHHHHHHHHhcchh-eeEEEEecCCcchhhhhhcchHHHHHHHHHc
Confidence 99999999999999864 3899999999999999999999998 9999999855443311110000000000000
Q ss_pred hh-hcccccCCcc--------cccccccCChHHHHHHhcCCCCcCCCCchh---------HHHHHHHHHHHHHhcCCCCC
Q 020633 187 GL-ADTWAAMPDN--------KMVGKAIKDPEKLKVIASNPRRYTGKPRVG---------TMREIARVCQYIQDNFSKVT 248 (323)
Q Consensus 187 ~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 248 (323)
.. .......... .............................. ..........+....+.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 233 (299)
T 3g9x_A 154 TADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSP 233 (299)
T ss_dssp SSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCC
T ss_pred CCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCC
Confidence 00 0000000000 000000011111111111000000000000 00011111223445567889
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+|+++|+|++|.++|.+.++.+.+.+ +++++++++++||++++++|++ +.+.|.+++.+..
T Consensus 234 ~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~~~~~~~ 294 (299)
T 3g9x_A 234 VPKLLFWGTPGVLIPPAEAARLAESL--PNCKTVDIGPGLHYLQEDNPDL----IGSEIARWLPALH 294 (299)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCHHHHCHHH----HHHHHHHHSGGGC
T ss_pred CCeEEEecCCCCCCCHHHHHHHHhhC--CCCeEEEeCCCCCcchhcCHHH----HHHHHHHHHhhhh
Confidence 99999999999999999999999998 7899999999999999766655 8888888776553
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=227.47 Aligned_cols=253 Identities=19% Similarity=0.204 Sum_probs=158.3
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcH
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
...+| +++|..++++ ..+++|||+||++++....|..+ ..+.++||+|+++|+||||.|+......++++++++|+
T Consensus 10 ~~~~g~~l~~~~~g~~--~~~~~vvllHG~~~~~~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl 86 (293)
T 1mtz_A 10 AKVNGIYIYYKLCKAP--EEKAKLMTMHGGPGMSHDYLLSL-RDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEA 86 (293)
T ss_dssp EEETTEEEEEEEECCS--SCSEEEEEECCTTTCCSGGGGGG-GGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHH
T ss_pred EEECCEEEEEEEECCC--CCCCeEEEEeCCCCcchhHHHHH-HHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHH
Confidence 33467 9999999863 22489999999865544244444 44567799999999999999986653335899999999
Q ss_pred HHHHHHH-HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh-hhccc
Q 020633 115 LSFFKHV-RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG-LADTW 192 (323)
Q Consensus 115 ~~~l~~l-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 192 (323)
.++++++ ..+ +++|+||||||.+|+.+|.++|++ |+++|++++........ .........+.. .....
T Consensus 87 ~~~~~~l~~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 156 (293)
T 1mtz_A 87 EALRSKLFGNE------KVFLMGSSYGGALALAYAVKYQDH-LKGLIVSGGLSSVPLTV---KEMNRLIDELPAKYRDAI 156 (293)
T ss_dssp HHHHHHHHTTC------CEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBHHHHH---HHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHhcCCC------cEEEEEecHHHHHHHHHHHhCchh-hheEEecCCccChHHHH---HHHHHHHHhcCHHHHHHH
Confidence 9999999 643 899999999999999999999998 99999999865421000 000000000000 00000
Q ss_pred ccCCcccccccccCChHHH----HHHhcCCCCcCCCCchhHHHHHHH---------H--------------HHHHHhcCC
Q 020633 193 AAMPDNKMVGKAIKDPEKL----KVIASNPRRYTGKPRVGTMREIAR---------V--------------CQYIQDNFS 245 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---------~--------------~~~~~~~~~ 245 (323)
.... ........... .............. ........ . ..+....+.
T Consensus 157 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 230 (293)
T 1mtz_A 157 KKYG----SSGSYENPEYQEAVNYFYHQHLLRSEDWP--PEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKIS 230 (293)
T ss_dssp HHHH----HHTCTTCHHHHHHHHHHHHHHTSCSSCCC--HHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGG
T ss_pred HHhh----ccCCcChHHHHHHHHHHHHhhcccccCch--HHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhc
Confidence 0000 00000000000 00000000000000 00000000 0 000123456
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|+|+|+|++| .++++.++.+.+.+ +++++++++++||++++++| +++.+.|.+||+++
T Consensus 231 ~i~~P~lii~G~~D-~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 231 AIKIPTLITVGEYD-EVTPNVARVIHEKI--AGSELHVFRDCSHLTMWEDR----EGYNKLLSDFILKH 292 (293)
T ss_dssp GCCSCEEEEEETTC-SSCHHHHHHHHHHS--TTCEEEEETTCCSCHHHHSH----HHHHHHHHHHHHTC
T ss_pred cCCCCEEEEeeCCC-CCCHHHHHHHHHhC--CCceEEEeCCCCCCccccCH----HHHHHHHHHHHHhc
Confidence 78999999999999 67778888888888 78999999999999996655 45999999999754
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=214.80 Aligned_cols=230 Identities=13% Similarity=0.195 Sum_probs=152.0
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|.... ..++++++++|+.++++.+.... ..+++|
T Consensus 16 ~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~-~~~~~~~~~~d~~~~~~~l~~~~---~~~~~l 90 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEEL-VHTGPDDWWQDVMNGYEFLKNKG---YEKIAV 90 (247)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHH-TTCCHHHHHHHHHHHHHHHHHHT---CCCEEE
T ss_pred CcEEEEECCCCCChH-HHHHHHHHHHHCCCEEEecccCCCCCCHHHh-cCCCHHHHHHHHHHHHHHHHHcC---CCeEEE
Confidence 478999999998887 8999999998889999999999999774321 22478888888877666665431 348999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+||||||.+|+.+|.++| |+++|+++++..... ..............+..... ..........
T Consensus 91 vG~SmGG~ia~~~a~~~p---v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 153 (247)
T 1tqh_A 91 AGLSLGGVFSLKLGYTVP---IEGIVTMCAPMYIKS---EETMYEGVLEYAREYKKREG-----------KSEEQIEQEM 153 (247)
T ss_dssp EEETHHHHHHHHHHTTSC---CSCEEEESCCSSCCC---HHHHHHHHHHHHHHHHHHHT-----------CCHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHhCC---CCeEEEEcceeecCc---chhhhHHHHHHHHHhhcccc-----------cchHHHHhhh
Confidence 999999999999999988 888988765432211 10000001000000000000 0000111111
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
...... ..... ..+.....+..+.+.++++|+|+|+|++|.++|++.++.+.+.+++.++++++++++||.++++
T Consensus 154 ~~~~~~--~~~~~---~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 228 (247)
T 1tqh_A 154 EKFKQT--PMKTL---KALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLD 228 (247)
T ss_dssp HHHTTS--CCTTH---HHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGS
T ss_pred hcccCC--CHHHH---HHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccC
Confidence 110000 01111 1122222335667889999999999999999999999999999844347999999999999865
Q ss_pred CCchhHHHHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWIDER 314 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~~ 314 (323)
++ .+++.+.|.+||++.
T Consensus 229 ~~---~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 229 QE---KDQLHEDIYAFLESL 245 (247)
T ss_dssp TT---HHHHHHHHHHHHHHS
T ss_pred cc---HHHHHHHHHHHHHhc
Confidence 42 355999999999753
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=232.16 Aligned_cols=246 Identities=17% Similarity=0.212 Sum_probs=158.9
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+++|...|. +++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+......++++++++|+.+++++
T Consensus 7 ~~~y~~~G~-----g~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~ 79 (269)
T 2xmz_A 7 KFYEANVET-----NQVLVFLHGFLSDSR-TYHNHIEKFTDN-YHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK 79 (269)
T ss_dssp EEECCSSCC-----SEEEEEECCTTCCGG-GGTTTHHHHHTT-SEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGG
T ss_pred eEEEEEcCC-----CCeEEEEcCCCCcHH-HHHHHHHHHhhc-CeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Confidence 566655443 357999999998877 888999999876 9999999999999987544245899999999999999
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH---HHHhhhh-----hhhhccc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---LFMYGLL-----FGLADTW 192 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~ 192 (323)
+..+ +++|+||||||.+|+.+|.++|++ |+++|++++.............. ......+ ..+...+
T Consensus 80 l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (269)
T 2xmz_A 80 YKDK------SITLFGYSMGGRVALYYAINGHIP-ISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDW 152 (269)
T ss_dssp GTTS------EEEEEEETHHHHHHHHHHHHCSSC-CSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCC------cEEEEEECchHHHHHHHHHhCchh-eeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHH
Confidence 8643 899999999999999999999998 99999999765432211000000 0000000 0000000
Q ss_pred ccCCcccccccccCChHHH-HHHhcCCCCcCCCCchhHHHHHHHHH-----HHHHhcCCCCCcCEEEEeeCCCcccCchh
Q 020633 193 AAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
.... .+........... ....... .. ............ ....+.+.++++|+|+|+|++|.+++.+.
T Consensus 153 ~~~~--~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 225 (269)
T 2xmz_A 153 EKLP--LFQSQLELPVEIQHQIRQQRL---SQ--SPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIA 225 (269)
T ss_dssp TTSG--GGGGGGGSCHHHHHHHHHHHH---TS--CHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHH
T ss_pred HhCc--cccccccCCHHHHHHHHHHHh---cc--CcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHH
Confidence 0000 0000000011111 1110000 00 000011111100 01134567889999999999999998776
Q ss_pred HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+ +.+.+ +++++++++++||++++++|+ ++.+.|.+||++.
T Consensus 226 ~~-~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 226 KK-MANLI--PNSKCKLISATGHTIHVEDSD----EFDTMILGFLKEE 266 (269)
T ss_dssp HH-HHHHS--TTEEEEEETTCCSCHHHHSHH----HHHHHHHHHHHHH
T ss_pred HH-HHhhC--CCcEEEEeCCCCCChhhcCHH----HHHHHHHHHHHHh
Confidence 55 77777 789999999999999976554 4999999999764
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=220.98 Aligned_cols=257 Identities=12% Similarity=0.160 Sum_probs=161.2
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCCh
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~ 107 (323)
.++.++...+| +|+|..+++.+ ++++|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ...+++
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~--~~~~vvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~ 80 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI--SRPPVLCLPGLTRNAR-DFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQP 80 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT--TSCCEEEECCTTCCGG-GGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSGGGCSH
T ss_pred cccCeeecCCCceEEEEEcCCCC--CCCcEEEECCCCcchh-hHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCccccCH
Confidence 35667788899 99999998753 3689999999998877 89999999977 7999999999999998643 234589
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+++++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++...... .. ..........
T Consensus 81 ~~~a~dl~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~----~~-~~~~~~~~~~ 148 (285)
T 3bwx_A 81 MQYLQDLEALLAQEGIE------RFVAIGTSLGGLLTMLLAAANPAR-IAAAVLNDVGPEVSP----EG-LERIRGYVGQ 148 (285)
T ss_dssp HHHHHHHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCH----HH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCCC------ceEEEEeCHHHHHHHHHHHhCchh-eeEEEEecCCcccCc----ch-hHHHHHHhcC
Confidence 99999999999998754 899999999999999999999999 999999865322110 00 0000000000
Q ss_pred ------h---hcccccCCcccccccccCChHHHHH----HhcCCCC-c--CCCCch-hHHHHH--HHHHHHHHhcCCCC-
Q 020633 188 ------L---ADTWAAMPDNKMVGKAIKDPEKLKV----IASNPRR-Y--TGKPRV-GTMREI--ARVCQYIQDNFSKV- 247 (323)
Q Consensus 188 ------~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~--~~~~~~-~~~~~~--~~~~~~~~~~~~~~- 247 (323)
+ .......... .... ......... +...... . ...... ...... .....+....+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (285)
T 3bwx_A 149 GRNFETWMHAARALQESSGD-VYPD-WDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALA 226 (285)
T ss_dssp CCEESSHHHHHHHHHHHHTT-TSTT-CCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHT
T ss_pred CcccccHHHHHHHHHHhhhh-cccc-cChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHcc
Confidence 0 0000000000 0000 000000000 0000000 0 000000 000000 00000000111223
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|+|+|+|++|.+++++..+.+.+. +++++++++++||++++++|+. + +.|.+||+
T Consensus 227 ~~P~lii~G~~D~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p~~----~-~~i~~fl~ 283 (285)
T 3bwx_A 227 TRPLLVLRGETSDILSAQTAAKMASR---PGVELVTLPRIGHAPTLDEPES----I-AAIGRLLE 283 (285)
T ss_dssp TSCEEEEEETTCSSSCHHHHHHHHTS---TTEEEEEETTCCSCCCSCSHHH----H-HHHHHHHT
T ss_pred CCCeEEEEeCCCCccCHHHHHHHHhC---CCcEEEEeCCCCccchhhCchH----H-HHHHHHHH
Confidence 79999999999999998888777654 6789999999999999776643 4 57888885
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=226.27 Aligned_cols=250 Identities=18% Similarity=0.142 Sum_probs=162.6
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHH
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
+...+| +++|...+. +++|||+||++ ++.. .|..+++.|++. |+|+++|+||||.|+ .....++++.+
T Consensus 20 ~~~~~g~~l~y~~~g~-----g~~vvllHG~~~~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~~~~~~~~~ 91 (296)
T 1j1i_A 20 FVNAGGVETRYLEAGK-----GQPVILIHGGGAGAESEG-NWRNVIPILARH-YRVIAMDMLGFGKTA-KPDIEYTQDRR 91 (296)
T ss_dssp EEEETTEEEEEEEECC-----SSEEEEECCCSTTCCHHH-HHTTTHHHHTTT-SEEEEECCTTSTTSC-CCSSCCCHHHH
T ss_pred EEEECCEEEEEEecCC-----CCeEEEECCCCCCcchHH-HHHHHHHHHhhc-CEEEEECCCCCCCCC-CCCCCCCHHHH
Confidence 334577 999988764 46899999997 4444 788888889776 999999999999998 44334689999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh------
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL------ 184 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~------ 184 (323)
++|+.++++.+.. ..+++|+||||||.+|+.+|.++|++ |+++|++++.......... .......
T Consensus 92 ~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~ia~~~A~~~p~~-v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~ 162 (296)
T 1j1i_A 92 IRHLHDFIKAMNF-----DGKVSIVGNSMGGATGLGVSVLHSEL-VNALVLMGSAGLVVEIHED---LRPIINYDFTREG 162 (296)
T ss_dssp HHHHHHHHHHSCC-----SSCEEEEEEHHHHHHHHHHHHHCGGG-EEEEEEESCCBCCCC-------------CCSCHHH
T ss_pred HHHHHHHHHhcCC-----CCCeEEEEEChhHHHHHHHHHhChHh-hhEEEEECCCCCCCCCCch---HHHHhcccCCchH
Confidence 9999999998864 13899999999999999999999998 9999999986532211100 0000000
Q ss_pred hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH------HHhcCCCCCcCEEEEeeCC
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY------IQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~l~i~g~~ 258 (323)
+........... ................ ................. ....+.++++|+|+|+|++
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~ 232 (296)
T 1j1i_A 163 MVHLVKALTNDG------FKIDDAMINSRYTYAT----DEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKD 232 (296)
T ss_dssp HHHHHHHHSCTT------CCCCHHHHHHHHHHHH----SHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETT
T ss_pred HHHHHHHhccCc------ccccHHHHHHHHHHhh----CcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECC
Confidence 000000000000 0000000000000000 00000001111111000 1124577899999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|.++|.+.++.+.+.+ ++.++++++++||++++++|+ ++.+.|.+||.++...
T Consensus 233 D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~~~~ 285 (296)
T 1j1i_A 233 DKVVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHPE----DFANATLSFLSLRVDI 285 (296)
T ss_dssp CSSSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSHH----HHHHHHHHHHHHC---
T ss_pred CcccCHHHHHHHHHHC--CCCEEEEECCCCCCchhcCHH----HHHHHHHHHHhccCCc
Confidence 9999999999999988 788999999999999965554 5999999999987643
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=227.05 Aligned_cols=241 Identities=15% Similarity=0.073 Sum_probs=152.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+......++++++++|+.++++++.. ..++
T Consensus 8 ~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~ 81 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW-IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPP-----DEKV 81 (264)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCT-----TCCE
T ss_pred CCCCeEEEECCCccccc-hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCC-----CCCe
Confidence 45789999999997766 89999999988899999999999999976544446899999999999999842 2389
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh--hhhcccc--cCCcccccccccCCh
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF--GLADTWA--AMPDNKMVGKAIKDP 208 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~ 208 (323)
+|+||||||.+++.+|.++|++ |+++|++++.......... .....+..... .+..... ...............
T Consensus 82 ~lvGhSmGG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T 2wfl_A 82 VLLGHSFGGMSLGLAMETYPEK-ISVAVFMSAMMPDPNHSLT-YPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGP 159 (264)
T ss_dssp EEEEETTHHHHHHHHHHHCGGG-EEEEEEESSCCCCTTSCTT-HHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCH
T ss_pred EEEEeChHHHHHHHHHHhChhh-hceeEEEeeccCCCCcchh-hHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhH
Confidence 9999999999999999999999 9999999875321111111 11111111000 0000000 000000000000001
Q ss_pred HHH-HHHhcCCCC-------cCCCCchhHHHHHHHHHHHHHhcC---CCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC
Q 020633 209 EKL-KVIASNPRR-------YTGKPRVGTMREIARVCQYIQDNF---SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 209 ~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
... ......... ............+ . ....+ ...++|+|+|+|++|.++|.+..+.+.+.+ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--p 232 (264)
T 2wfl_A 160 QFMALKMFQNCSVEDLELAKMLTRPGSLFFQDL----A-KAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV--G 232 (264)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHH----T-TSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH--C
T ss_pred HHHHHHHhcCCCHHHHHHHHhccCCCccccccc----c-cccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC--C
Confidence 000 000000000 0000000000000 0 00111 113689999999999999999999999888 7
Q ss_pred CccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.++++++++||++++|+|++ +++.|.+|++
T Consensus 233 ~~~~~~i~~~gH~~~~e~P~~----~~~~l~~f~~ 263 (264)
T 2wfl_A 233 ADKVKEIKEADHMGMLSQPRE----VCKCLLDISD 263 (264)
T ss_dssp CSEEEEETTCCSCHHHHSHHH----HHHHHHHHHC
T ss_pred CceEEEeCCCCCchhhcCHHH----HHHHHHHHhh
Confidence 899999999999999766665 8888888874
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-34 Score=222.02 Aligned_cols=249 Identities=12% Similarity=0.008 Sum_probs=158.3
Q ss_pred EcCCC-cEEEEEe--cCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 36 ETPNG-KLFTQSF--LPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 36 ~~~~g-~l~~~~~--~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
...+| +|+|..+ |.+ +|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ..++++++++
T Consensus 9 ~~~~g~~l~y~~~~~G~~----~p~vvllHG~~~~~~-~w~~~~~~L~~-~~rvia~DlrGhG~S~~~~-~~~~~~~~a~ 81 (276)
T 2wj6_A 9 TLVFDNKLSYIDNQRDTD----GPAILLLPGWCHDHR-VYKYLIQELDA-DFRVIVPNWRGHGLSPSEV-PDFGYQEQVK 81 (276)
T ss_dssp EEETTEEEEEEECCCCCS----SCEEEEECCTTCCGG-GGHHHHHHHTT-TSCEEEECCTTCSSSCCCC-CCCCHHHHHH
T ss_pred EeeCCeEEEEEEecCCCC----CCeEEEECCCCCcHH-HHHHHHHHHhc-CCEEEEeCCCCCCCCCCCC-CCCCHHHHHH
Confidence 34578 9999988 532 479999999998887 89999999976 4999999999999998653 2368999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCCCchhhHHHHHhhhh--hhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL--FGLA 189 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 189 (323)
|+.+++++++.+ +++|+||||||.+|+.+|.++ |++ |+++|++++...... ... ........ ..+.
T Consensus 82 dl~~ll~~l~~~------~~~lvGhSmGG~va~~~A~~~~P~r-v~~lvl~~~~~~~~~---~~~-~~~~~~~~~~~~~~ 150 (276)
T 2wj6_A 82 DALEILDQLGVE------TFLPVSHSHGGWVLVELLEQAGPER-APRGIIMDWLMWAPK---PDF-AKSLTLLKDPERWR 150 (276)
T ss_dssp HHHHHHHHHTCC------SEEEEEEGGGHHHHHHHHHHHHHHH-SCCEEEESCCCSSCC---HHH-HHHHHHHHCTTTHH
T ss_pred HHHHHHHHhCCC------ceEEEEECHHHHHHHHHHHHhCHHh-hceEEEecccccCCC---chH-HHHhhhccCcchHH
Confidence 999999999855 899999999999999999999 999 999999987532111 110 00000000 0000
Q ss_pred cccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHH----HHHHHH---HHHhcCCCCCcCEEEEeeCCCccc
Q 020633 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMRE----IARVCQ---YIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
..... ....+... .........+...... ........ ...... .....+.++++|+++++|..|...
T Consensus 151 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~ 224 (276)
T 2wj6_A 151 EGTHG-LFDVWLDG-HDEKRVRHHLLEEMAD----YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTE 224 (276)
T ss_dssp HHHHH-HHHHHHTT-BCCHHHHHHHHTTTTT----CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCS
T ss_pred HHHHH-HHHHhhcc-cchHHHHHHHHHHhhh----cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccc
Confidence 00000 00000000 0111111112111110 00111110 000000 012345678999999887433222
Q ss_pred C--chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 263 C--PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 263 ~--~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+ ....+.+.+.+ +++++++++++||++++|+|++ +++.|.+||++.
T Consensus 225 ~~~~~~~~~~~~~~--p~a~~~~i~~~gH~~~~e~P~~----~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 225 PEYEKINSDFAEQH--PWFSYAKLGGPTHFPAIDVPDR----AAVHIREFATAI 272 (276)
T ss_dssp HHHHHHHHHHHHHC--TTEEEEECCCSSSCHHHHSHHH----HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhC--CCeEEEEeCCCCCcccccCHHH----HHHHHHHHHhhc
Confidence 2 23445667777 7899999999999999666554 999999999764
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=221.10 Aligned_cols=243 Identities=14% Similarity=0.135 Sum_probs=164.8
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
.+| +++|...+. +|+|||+||++++.. .|..+...|.+ .||+|+++|+||||.|..... .+++++++|+.
T Consensus 8 ~~g~~l~y~~~g~-----~~~vv~lhG~~~~~~-~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~ 79 (272)
T 3fsg_A 8 LTRSNISYFSIGS-----GTPIIFLHGLSLDKQ-STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP--STSDNVLETLI 79 (272)
T ss_dssp ECTTCCEEEEECC-----SSEEEEECCTTCCHH-HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS--CSHHHHHHHHH
T ss_pred ecCCeEEEEEcCC-----CCeEEEEeCCCCcHH-HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC--CCHHHHHHHHH
Confidence 366 999998873 568999999998887 89999988887 699999999999999987665 69999999999
Q ss_pred HHHHH-HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccccc
Q 020633 116 SFFKH-VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194 (323)
Q Consensus 116 ~~l~~-l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
+++++ +. ..+++++|||+||.+|+.+|.++|++ |+++|+++|............ .......
T Consensus 80 ~~l~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~----------~~~~~~~- 141 (272)
T 3fsg_A 80 EAIEEIIG------ARRFILYGHSYGGYLAQAIAFHLKDQ-TLGVFLTCPVITADHSKRLTG----------KHINILE- 141 (272)
T ss_dssp HHHHHHHT------TCCEEEEEEEHHHHHHHHHHHHSGGG-EEEEEEEEECSSCCGGGCCCC----------CCCCEEC-
T ss_pred HHHHHHhC------CCcEEEEEeCchHHHHHHHHHhChHh-hheeEEECcccccCccccccc----------cchhhhh-
Confidence 99999 43 34899999999999999999999998 999999998753321110000 0000000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcC--------------CCCchhHHHHHHH---HHHHHHhcCCCCCcCEEEEeeC
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYT--------------GKPRVGTMREIAR---VCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
..+.... ................. ..........+.. ........+.++++|+++|+|+
T Consensus 142 ---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 217 (272)
T 3fsg_A 142 ---EDINPVE-NKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGR 217 (272)
T ss_dssp ---SCCCCCT-TGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEET
T ss_pred ---hhhhccc-CHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeC
Confidence 0000000 00000000000000000 0000000000000 0000122457889999999999
Q ss_pred CCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|.++|++..+.+.+.+ +++++++++++||++++++ .+++.+.|.+||++..+
T Consensus 218 ~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 218 NDQVVGYQEQLKLINHN--ENGEIVLLNRTGHNLMIDQ----REAVGFHFDLFLDELNS 270 (272)
T ss_dssp TCTTTCSHHHHHHHTTC--TTEEEEEESSCCSSHHHHT----HHHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHhc--CCCeEEEecCCCCCchhcC----HHHHHHHHHHHHHHhhc
Confidence 99999999999998888 7899999999999999654 45599999999987643
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=226.46 Aligned_cols=256 Identities=14% Similarity=0.082 Sum_probs=166.9
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
..+...+| +++|..++. +|+|||+||++++.. .|..+++.|+++ |+|+++|+||||.|.... ..+++++++
T Consensus 12 ~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~-~~~~~~~~~ 83 (301)
T 3kda_A 12 SAYREVDGVKLHYVKGGQ-----GPLVMLVHGFGQTWY-EWHQLMPELAKR-FTVIAPDLPGLGQSEPPK-TGYSGEQVA 83 (301)
T ss_dssp EEEEEETTEEEEEEEEES-----SSEEEEECCTTCCGG-GGTTTHHHHTTT-SEEEEECCTTSTTCCCCS-SCSSHHHHH
T ss_pred eEEEeeCCeEEEEEEcCC-----CCEEEEECCCCcchh-HHHHHHHHHHhc-CeEEEEcCCCCCCCCCCC-CCccHHHHH
Confidence 34455577 999999983 579999999998887 899999999988 999999999999998663 345899999
Q ss_pred hcHHHHHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc----------hhhHHHH
Q 020633 112 ASSLSFFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK----------PSKLHLF 180 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~----------~~~~~~~ 180 (323)
+|+.++++++..+ + ++++||||||.+++.+|.++|++ |+++|++++......... ..+....
T Consensus 84 ~~l~~~l~~l~~~------~p~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (301)
T 3kda_A 84 VYLHKLARQFSPD------RPFDLVAHDIGIWNTYPMVVKNQAD-IARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSF 156 (301)
T ss_dssp HHHHHHHHHHCSS------SCEEEEEETHHHHTTHHHHHHCGGG-EEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHH
T ss_pred HHHHHHHHHcCCC------ccEEEEEeCccHHHHHHHHHhChhh-ccEEEEEccCCCCCCccchhhhcchhhhhhhhHHH
Confidence 9999999998654 5 99999999999999999999998 999999998643211100 0000000
Q ss_pred Hh---hhh------------hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHH---HHHHHHh
Q 020633 181 MY---GLL------------FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR---VCQYIQD 242 (323)
Q Consensus 181 ~~---~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 242 (323)
.. ... ..+....... .................................. .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (301)
T 3kda_A 157 FAADDRLAETLIAGKERFFLEHFIKSHASN------TEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAK 230 (301)
T ss_dssp HHCSTTHHHHHHTTCHHHHHHHHHHHTCSS------GGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred hhcCcchHHHHhccchHHHHHHHHHhccCC------cccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchh
Confidence 00 000 0000000000 0000111111111100000000000000111100 1111223
Q ss_pred cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.++++|+|+|+|++| ++.+..+.+.+.+ +++++++++++||++++++|++ +.+.|.+|+++..+.
T Consensus 231 ~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 231 TRLQMPTMTLAGGGAGG--MGTFQLEQMKAYA--EDVEGHVLPGCGHWLPEECAAP----MNRLVIDFLSRGRHH 297 (301)
T ss_dssp SCBCSCEEEEEECSTTS--CTTHHHHHHHTTB--SSEEEEEETTCCSCHHHHTHHH----HHHHHHHHHTTSCCC
T ss_pred hccccCcceEEEecCCC--CChhHHHHHHhhc--ccCeEEEcCCCCcCchhhCHHH----HHHHHHHHHhhCchh
Confidence 34589999999999999 7777788887777 7899999999999999655554 999999999876443
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=229.03 Aligned_cols=240 Identities=18% Similarity=0.247 Sum_probs=154.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc---ccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR---CYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
+|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ....+++++++|+.++++++..+ +
T Consensus 20 ~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~------~ 91 (271)
T 1wom_A 20 KASIMFAPGFGCDQS-VWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLK------E 91 (271)
T ss_dssp SSEEEEECCTTCCGG-GGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCS------C
T ss_pred CCcEEEEcCCCCchh-hHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCC------C
Confidence 479999999998877 89888988976 5999999999999997543 22247899999999999988643 8
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC------chhhHHHHHhhhhhhhhcccccCCccccccccc
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM------KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++|+||||||.+++.+|.++|++ |+++|++++........ ........+...+......+............
T Consensus 92 ~~lvGhS~GG~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 169 (271)
T 1wom_A 92 TVFVGHSVGALIGMLASIRRPEL-FSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQP- 169 (271)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCT-
T ss_pred eEEEEeCHHHHHHHHHHHhCHHh-hcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC-
Confidence 99999999999999999999999 99999998753211100 00000011110000000000000000000000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEE
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
........+...... . ............ .+....+.++++|+|+|+|++|.++|.+..+.+.+.+ +++++++
T Consensus 170 ~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~ 243 (271)
T 1wom_A 170 DRPEIKEELESRFCS--T--DPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL--PYSSLKQ 243 (271)
T ss_dssp TCHHHHHHHHHHHHH--S--CHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS--SSEEEEE
T ss_pred CchHHHHHHHHHHhc--C--CcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC--CCCEEEE
Confidence 011111000000000 0 000000010000 0112345788999999999999999999999898888 7899999
Q ss_pred ecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++||++++++|+ ++.+.|.+||+++
T Consensus 244 i~~~gH~~~~e~p~----~~~~~i~~fl~~~ 270 (271)
T 1wom_A 244 MEARGHCPHMSHPD----ETIQLIGDYLKAH 270 (271)
T ss_dssp EEEESSCHHHHCHH----HHHHHHHHHHHHH
T ss_pred eCCCCcCccccCHH----HHHHHHHHHHHhc
Confidence 99999999966554 4999999999865
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=218.18 Aligned_cols=251 Identities=13% Similarity=0.128 Sum_probs=166.0
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
.++...+| +|+|..+++ +|+||++||++++.. .|..+++.|. +||+|+++|+||||.|+... .+++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~--~~~~~~~~ 75 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSGS-----GPPVVLVGGALSTRA-GGAPLAERLA-PHFTVICYDRRGRGDSGDTP--PYAVEREI 75 (262)
T ss_dssp CEEECTTSCEEEEEEEEC-----SSEEEEECCTTCCGG-GGHHHHHHHT-TTSEEEEECCTTSTTCCCCS--SCCHHHHH
T ss_pred heEEcCCCcEEEEEEcCC-----CCcEEEECCCCcChH-HHHHHHHHHh-cCcEEEEEecCCCcCCCCCC--CCCHHHHH
Confidence 45778889 999999875 468999999998887 8999999998 78999999999999998765 35899999
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch--hhHHHHHhhhhhhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SKLHLFMYGLLFGLA 189 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 189 (323)
+|+.++++++. + +++++|||+||.+++.+|.++| + |+++|+++|.......... ......+...+....
T Consensus 76 ~~~~~~~~~l~-~------~~~l~G~S~Gg~ia~~~a~~~p-~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (262)
T 3r0v_A 76 EDLAAIIDAAG-G------AAFVFGMSSGAGLSLLAAASGL-P-ITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGR 146 (262)
T ss_dssp HHHHHHHHHTT-S------CEEEEEETHHHHHHHHHHHTTC-C-EEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcC-C------CeEEEEEcHHHHHHHHHHHhCC-C-cceEEEEcCCcccccccchhhhHHHHHHHHHhhccc
Confidence 99999999986 3 7999999999999999999999 7 9999999987665433211 111111111100000
Q ss_pred cccccCCccccccc-ccCChHHHHHHhcCCCCcC---CCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 190 DTWAAMPDNKMVGK-AIKDPEKLKVIASNPRRYT---GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 190 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
.. .....+... ..........+........ .....................+.++++|+++|+|++|.++|.+
T Consensus 147 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 223 (262)
T 3r0v_A 147 RG---DAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRH 223 (262)
T ss_dssp HH---HHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHH
T ss_pred hh---hHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHH
Confidence 00 000000000 0011111111111110000 0000000000000000013456778999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
..+.+.+.+ +++++++++++||+ ++ .+++.+.|.+||++
T Consensus 224 ~~~~~~~~~--~~~~~~~~~~~gH~---~~----p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 224 TAQELADTI--PNARYVTLENQTHT---VA----PDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHS--TTEEEEECCCSSSS---CC----HHHHHHHHHHHHC-
T ss_pred HHHHHHHhC--CCCeEEEecCCCcc---cC----HHHHHHHHHHHHhC
Confidence 999999998 78899999999993 33 45589999999853
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=220.28 Aligned_cols=241 Identities=14% Similarity=0.040 Sum_probs=154.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+......++++++++|+.++++.+.. ..+++|
T Consensus 4 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~l 77 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSA-----DEKVIL 77 (273)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCS-----SSCEEE
T ss_pred CCeEEEECCCCCCcc-hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhcc-----CCCEEE
Confidence 579999999997766 89999999988899999999999999976544446899999999999998852 138999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh--hhcccc--cCCcccccccccCChHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG--LADTWA--AMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~ 210 (323)
+||||||.+++.+|.++|++ |+++|++++.......... ............ +..... .................
T Consensus 78 vGhSmGG~va~~~a~~~P~~-v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T 1xkl_A 78 VGHSLGGMNLGLAMEKYPQK-IYAAVFLAAFMPDSVHNSS-FVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF 155 (273)
T ss_dssp EEETTHHHHHHHHHHHCGGG-EEEEEEESCCCCCSSSCTT-HHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHH
T ss_pred EecCHHHHHHHHHHHhChHh-heEEEEEeccCCCCCCcHH-HHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHH
Confidence 99999999999999999999 9999999875322111111 111111110000 000000 00000000000001100
Q ss_pred -HHHHhcCCC--------CcCCCCchhHHHHHHHHHHHHHhcC---CCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC
Q 020633 211 -LKVIASNPR--------RYTGKPRVGTMREIARVCQYIQDNF---SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD 278 (323)
Q Consensus 211 -~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 278 (323)
......... .... ........+. ....+ ...++|+++|+|++|.++|++..+.+.+.+ ++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--p~ 227 (273)
T 1xkl_A 156 LAHKLYQLCSPEDLALASSLVR-PSSLFMEDLS-----KAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GV 227 (273)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCC-CBCCCHHHHH-----HCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH--CC
T ss_pred HHHHhhccCCHHHHHHHHHhcC-CCchhhhhhh-----cccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC--CC
Confidence 000000000 0000 0000000000 00111 114789999999999999999999999888 78
Q ss_pred ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 279 KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 279 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.++++++++||++++++|++ +++.|.+|+++..
T Consensus 228 ~~~~~i~~aGH~~~~e~P~~----~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 228 TEAIEIKGADHMAMLCEPQK----LCASLLEIAHKYN 260 (273)
T ss_dssp SEEEEETTCCSCHHHHSHHH----HHHHHHHHHHHCC
T ss_pred CeEEEeCCCCCCchhcCHHH----HHHHHHHHHHHhc
Confidence 89999999999999766655 9999999997653
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=227.29 Aligned_cols=258 Identities=15% Similarity=0.111 Sum_probs=166.2
Q ss_pred ceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChHH
Q 020633 31 GKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDMEK 109 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~ 109 (323)
++.++.+.+++++|...+. +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+... ....++++
T Consensus 4 ~~~~~~~~~~~~~y~~~g~-----~~~vv~~HG~~~~~~-~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~ 76 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKGE-----GPPLCVTHLYSEYND-NGNTFANPFTD-HYSVYLVNLKGCGNSDSAKNDSEYSMTE 76 (278)
T ss_dssp EEEEEEETTEEEEEEEECS-----SSEEEECCSSEECCT-TCCTTTGGGGG-TSEEEEECCTTSTTSCCCSSGGGGSHHH
T ss_pred ccCcEecCCceEEEEecCC-----CCeEEEEcCCCcchH-HHHHHHHHhhc-CceEEEEcCCCCCCCCCCCCcccCcHHH
Confidence 3445555444999988873 579999999998877 78888888877 8999999999999998654 23458999
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch-------hhHHHHHh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP-------SKLHLFMY 182 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~-------~~~~~~~~ 182 (323)
+++|+.++++++..+ +++++|||+||.+++.+|.++|++ |+++|++++.......... ........
T Consensus 77 ~~~~~~~~~~~l~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (278)
T 3oos_A 77 TIKDLEAIREALYIN------KWGFAGHSAGGMLALVYATEAQES-LTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIV 149 (278)
T ss_dssp HHHHHHHHHHHTTCS------CEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHH
T ss_pred HHHHHHHHHHHhCCC------eEEEEeecccHHHHHHHHHhCchh-hCeEEEecCccccccccccchhhhhhchhHHHHH
Confidence 999999999998643 899999999999999999999998 9999999987651100000 00001111
Q ss_pred hhhhhhhcccccCC-----cccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHH--H--HHHHHhcCCCCCcCEEE
Q 020633 183 GLLFGLADTWAAMP-----DNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR--V--CQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 183 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~P~l~ 253 (323)
.............. ........................ ............ . ..+....+.++++|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 226 (278)
T 3oos_A 150 SIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNS---GKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFI 226 (278)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCC---CEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEE
T ss_pred HHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhcccc---chhHHHHHHHhhhcccccccHHHHHhCCCCCEEE
Confidence 11111000000000 000000000011111111111110 001101111111 0 00123445778999999
Q ss_pred EeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|+|++|.++|.+.++.+.+.+ +++++++++++||++++++|++ +.+.|.+||
T Consensus 227 i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~----~~~~i~~fl 278 (278)
T 3oos_A 227 YCGKHDVQCPYIFSCEIANLI--PNATLTKFEESNHNPFVEEIDK----FNQFVNDTL 278 (278)
T ss_dssp EEETTCSSSCHHHHHHHHHHS--TTEEEEEETTCSSCHHHHSHHH----HHHHHHHTC
T ss_pred EEeccCCCCCHHHHHHHHhhC--CCcEEEEcCCcCCCcccccHHH----HHHHHHhhC
Confidence 999999999999999999998 7899999999999999655554 888887774
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=221.67 Aligned_cols=239 Identities=15% Similarity=0.091 Sum_probs=152.7
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++.+.. .|..+++.|.++||+|+++|+||||.|+......++++++++|+.++++.+.. ..+++|
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~l 76 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP-----GEKVIL 76 (257)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCT-----TCCEEE
T ss_pred CCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccc-----cCCeEE
Confidence 578999999997666 89999999988899999999999999976544446899999999999998841 238999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc--ccccccccCChHHH-
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD--NKMVGKAIKDPEKL- 211 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 211 (323)
+||||||.+++.+|.++|++ |+++|++++.......... ............+......... ..............
T Consensus 77 vGhSmGG~va~~~a~~~p~~-v~~lVl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 3c6x_A 77 VGESCGGLNIAIAADKYCEK-IAAAVFHNSVLPDTEHCPS-YVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLR 154 (257)
T ss_dssp EEEETHHHHHHHHHHHHGGG-EEEEEEEEECCCCSSSCTT-HHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHH
T ss_pred EEECcchHHHHHHHHhCchh-hheEEEEecccCCCCCcch-hHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHH
Confidence 99999999999999999999 9999999875321111111 1111111100000000000000 00000000011100
Q ss_pred HHHhcCCC--------CcCCCCchhHHHHHHHHHHHHHhcC--C-CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCcc
Q 020633 212 KVIASNPR--------RYTGKPRVGTMREIARVCQYIQDNF--S-KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280 (323)
Q Consensus 212 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 280 (323)
........ .... ........+.. ...+ . ..++|+|+|+|++|.++|++.++.+.+.+ ++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~--~~~~ 226 (257)
T 3c6x_A 155 ENLYTLCGPEEYELAKMLTR-KGSLFQNILAK-----RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDK 226 (257)
T ss_dssp HHTSTTSCHHHHHHHHHHCC-CBCCCHHHHHH-----SCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS--CCSE
T ss_pred HHHhcCCCHHHHHHHHHhcC-CCccchhhhcc-----ccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC--CCCe
Confidence 00000000 0000 00000000000 0111 1 13789999999999999999999999998 7899
Q ss_pred EEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 281 ~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++++++||++++++|++ +++.|.+|+++
T Consensus 227 ~~~i~~~gH~~~~e~P~~----~~~~l~~f~~~ 255 (257)
T 3c6x_A 227 VYKVEGGDHKLQLTKTKE----IAEILQEVADT 255 (257)
T ss_dssp EEECCSCCSCHHHHSHHH----HHHHHHHHHHH
T ss_pred EEEeCCCCCCcccCCHHH----HHHHHHHHHHh
Confidence 999999999999766665 88999999864
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=218.21 Aligned_cols=239 Identities=13% Similarity=0.077 Sum_probs=157.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+......++++++++|+.++++++.. ..+++|
T Consensus 4 g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~~~l 77 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW-IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPE-----NEEVIL 77 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCT-----TCCEEE
T ss_pred CCcEEEECCCCCccc-cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcc-----cCceEE
Confidence 489999999998887 89999999999999999999999999987655556999999999999998854 248999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccccc---CCcccccccccCC----
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA---MPDNKMVGKAIKD---- 207 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---- 207 (323)
+|||+||.+++.+|.++|++ |+++|++++........... ...........+...... .............
T Consensus 78 vGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (258)
T 3dqz_A 78 VGFSFGGINIALAADIFPAK-IKVLVFLNAFLPDTTHVPSH-VLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMK 155 (258)
T ss_dssp EEETTHHHHHHHHHTTCGGG-EEEEEEESCCCCCSSSCTTH-HHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHH
T ss_pred EEeChhHHHHHHHHHhChHh-hcEEEEecCCCCCCCCcchH-HHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHH
Confidence 99999999999999999998 99999999865433322211 111111100000000000 0000000000000
Q ss_pred --------hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCc
Q 020633 208 --------PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADK 279 (323)
Q Consensus 208 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 279 (323)
............... .....+.. ..........++|+++|+|++|.++|++..+.+.+.+ ++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~ 226 (258)
T 3dqz_A 156 ARLYQNCPIEDYELAKMLHRQGS-----FFTEDLSK--KEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF--NVS 226 (258)
T ss_dssp HHTSTTSCHHHHHHHHHHCCCEE-----CCHHHHHT--SCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS--CCS
T ss_pred HHhhccCCHHHHHHHHHhccCCc-----hhhhhhhc--cccccccccccCCEEEEECCCCeeeCHHHHHHHHHhC--Ccc
Confidence 000000000000000 00000000 0000111223799999999999999999999999998 778
Q ss_pred cEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 280 SIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 280 ~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++++++||++++++|++ +.+.|.+|++++
T Consensus 227 ~~~~~~~~gH~~~~~~p~~----~~~~i~~fl~~~ 257 (258)
T 3dqz_A 227 KVYEIDGGDHMVMLSKPQK----LFDSLSAIATDY 257 (258)
T ss_dssp CEEEETTCCSCHHHHSHHH----HHHHHHHHHHHT
T ss_pred cEEEcCCCCCchhhcChHH----HHHHHHHHHHHh
Confidence 9999999999999665554 889999998864
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=226.60 Aligned_cols=257 Identities=16% Similarity=0.099 Sum_probs=169.3
Q ss_pred ccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC--cccCCC
Q 020633 29 RNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--RCYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~~~~~~ 106 (323)
..++.++.+.+|+++|..+++. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|... .....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~----~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 76 (279)
T 4g9e_A 2 TINYHELETSHGRIAVRESEGE----GAPLLMIHGNSSSGA-IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYS 76 (279)
T ss_dssp CCEEEEEEETTEEEEEEECCCC----EEEEEEECCTTCCGG-GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSS
T ss_pred ceEEEEEEcCCceEEEEecCCC----CCeEEEECCCCCchh-HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCC
Confidence 3456777887779998887653 689999999998887 899999987777899999999999999864 223458
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++++|+.++++.+..+ +++++|||+||.+++.+|.++|+ +.++|++++......... ........
T Consensus 77 ~~~~~~~~~~~~~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~--~~~~vl~~~~~~~~~~~~-----~~~~~~~~ 143 (279)
T 4g9e_A 77 MEGYADAMTEVMQQLGIA------DAVVFGWSLGGHIGIEMIARYPE--MRGLMITGTPPVAREEVG-----QGFKSGPD 143 (279)
T ss_dssp HHHHHHHHHHHHHHHTCC------CCEEEEETHHHHHHHHHTTTCTT--CCEEEEESCCCCCGGGHH-----HHBCCSTT
T ss_pred HHHHHHHHHHHHHHhCCC------ceEEEEECchHHHHHHHHhhCCc--ceeEEEecCCCCCCCccc-----hhhccchh
Confidence 999999999999998643 89999999999999999999998 777887776543221100 00000000
Q ss_pred hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCC--------CchhHHHHHHHHHH-----HHHhcCCCCCcCEEE
Q 020633 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGK--------PRVGTMREIARVCQ-----YIQDNFSKVTVPFLT 253 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-----~~~~~~~~~~~P~l~ 253 (323)
... ......................... .............. +....+.++++|+|+
T Consensus 144 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 213 (279)
T 4g9e_A 144 MAL----------AGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAV 213 (279)
T ss_dssp GGG----------GGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEE
T ss_pred hhh----------cCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEE
Confidence 000 0000000000000000000000000 00000000000000 012335678999999
Q ss_pred EeeCCCcccCchhHHHHH-HHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhcC
Q 020633 254 VHGTADGVTCPTSSKLLY-EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERYG 319 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 319 (323)
|+|++|.++|.+..+.+. +.+ +++++++++++||++++++| +++.+.|.+||++..+...
T Consensus 214 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~~~~~~~ 274 (279)
T 4g9e_A 214 VNGRDEPFVELDFVSKVKFGNL--WEGKTHVIDNAGHAPFREAP----AEFDAYLARFIRDCTQLEH 274 (279)
T ss_dssp EEETTCSSBCHHHHTTCCCSSB--GGGSCEEETTCCSCHHHHSH----HHHHHHHHHHHHHHHSSCC
T ss_pred EEcCCCcccchHHHHHHhhccC--CCCeEEEECCCCcchHHhCH----HHHHHHHHHHHHHhhhhhh
Confidence 999999999998887776 555 67899999999999996554 5599999999999876543
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=216.61 Aligned_cols=246 Identities=13% Similarity=0.060 Sum_probs=158.9
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.++|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+......++++++++|+.++++++.. ..++
T Consensus 10 ~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~ 83 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-CWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPA-----NEKI 83 (267)
T ss_dssp CCCCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCT-----TSCE
T ss_pred CCCCeEEEECCCCCCcc-hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCC-----CCCE
Confidence 45799999999998887 89999999999999999999999999987765556999999999999998831 3489
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh-cccccCCcc-ccc-ccccCChH
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA-DTWAAMPDN-KMV-GKAIKDPE 209 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~ 209 (323)
+|+||||||.+++.+|.++|++ |+++|++++............ ..........+. ..+...... ... ........
T Consensus 84 ~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (267)
T 3sty_A 84 ILVGHALGGLAISKAMETFPEK-ISVAVFLSGLMPGPNIDATTV-CTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKF 161 (267)
T ss_dssp EEEEETTHHHHHHHHHHHSGGG-EEEEEEESCCCCBTTBCHHHH-HHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHH
T ss_pred EEEEEcHHHHHHHHHHHhChhh-cceEEEecCCCCCCcchHHHH-HHHhcccchhhhhhhhhhhhhhhcccchhhhhHHH
Confidence 9999999999999999999998 999999998764433221111 111100000000 000000000 000 00000000
Q ss_pred HHHHHhcCCCC--------cCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccE
Q 020633 210 KLKVIASNPRR--------YTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSI 281 (323)
Q Consensus 210 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
....+...... ............+.. .. ........++|+++|+|++|.+++++..+.+.+.+ +++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~ 237 (267)
T 3sty_A 162 LATNVYHLSPIEDLALATALVRPLYLYLAEDISK-EV-VLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKN--PPDEV 237 (267)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHH-HC-CCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHS--CCSEE
T ss_pred HHHhhcccCCHHHHHHHHHhhccchhHHHHHhhc-ch-hcccccccCCCEEEEEeCCCCccCHHHHHHHHHhC--CCceE
Confidence 00000000000 000000000000000 00 00111122699999999999999999999999998 77999
Q ss_pred EEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 282 KIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 282 ~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++++||++++++|++ +.+.|.+|++++
T Consensus 238 ~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 266 (267)
T 3sty_A 238 KEIEGSDHVTMMSKPQQ----LFTTLLSIANKY 266 (267)
T ss_dssp EECTTCCSCHHHHSHHH----HHHHHHHHHHHC
T ss_pred EEeCCCCccccccChHH----HHHHHHHHHHhc
Confidence 99999999999665554 999999999763
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=219.86 Aligned_cols=248 Identities=14% Similarity=0.048 Sum_probs=162.1
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
+| +++|..+++++ +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.. ...++++++++|+.++
T Consensus 7 ~g~~l~~~~~g~~~---~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~v~~~D~~G~G~S~~~-~~~~~~~~~~~~~~~~ 80 (264)
T 3ibt_A 7 NGTLMTYSESGDPH---APTLFLLSGWCQDHR-LFKNLAPLLARD-FHVICPDWRGHDAKQTD-SGDFDSQTLAQDLLAF 80 (264)
T ss_dssp TTEECCEEEESCSS---SCEEEEECCTTCCGG-GGTTHHHHHTTT-SEEEEECCTTCSTTCCC-CSCCCHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCC---CCeEEEEcCCCCcHh-HHHHHHHHHHhc-CcEEEEccccCCCCCCC-ccccCHHHHHHHHHHH
Confidence 67 99999998744 689999999999887 899999999765 99999999999999875 3345899999999999
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh-hcccccC
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL-ADTWAAM 195 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 195 (323)
++++..+ +++++||||||.+++.+|.++ |++ |+++|++++.. .. .... ...+....... .......
T Consensus 81 l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~p~~-v~~lvl~~~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~ 148 (264)
T 3ibt_A 81 IDAKGIR------DFQMVSTSHGCWVNIDVCEQLGAAR-LPKTIIIDWLL-QP---HPGF-WQQLAEGQHPTEYVAGRQS 148 (264)
T ss_dssp HHHTTCC------SEEEEEETTHHHHHHHHHHHSCTTT-SCEEEEESCCS-SC---CHHH-HHHHHHTTCTTTHHHHHHH
T ss_pred HHhcCCC------ceEEEecchhHHHHHHHHHhhChhh-hheEEEecCCC-Cc---Chhh-cchhhcccChhhHHHHHHH
Confidence 9998643 899999999999999999999 999 99999999876 11 1111 11111000000 0000000
Q ss_pred CcccccccccCChHHHHHHhcCCCCcCCCCchhHHH-HHHHHHH---HHHhcCCCCCcCEEEEee--CCCcccCchhHHH
Q 020633 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR-EIARVCQ---YIQDNFSKVTVPFLTVHG--TADGVTCPTSSKL 269 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~P~l~i~g--~~D~~~~~~~~~~ 269 (323)
....+... .........+......... ....... .+..... .....+.++++|+++++| +.|...+.+..+.
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~ 226 (264)
T 3ibt_A 149 FFDEWAET-TDNADVLNHLRNEMPWFHG-EMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLE 226 (264)
T ss_dssp HHHHHHTT-CCCHHHHHHHHHTGGGSCH-HHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHH
T ss_pred HHHHhccc-CCcHHHHHHHHHhhhhccc-hhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHH
Confidence 00000000 0122222222222111100 0000011 1111111 022566789999999976 4444445666777
Q ss_pred HHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.+.+ ++.++++++++||++++++|++ +.+.|.+||+
T Consensus 227 ~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~ 263 (264)
T 3ibt_A 227 FAAGH--SWFHPRHIPGRTHFPSLENPVA----VAQAIREFLQ 263 (264)
T ss_dssp HHHHC--TTEEEEECCCSSSCHHHHCHHH----HHHHHHHHTC
T ss_pred HHHhC--CCceEEEcCCCCCcchhhCHHH----HHHHHHHHHh
Confidence 88877 7889999999999999665554 8889999875
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=226.39 Aligned_cols=264 Identities=9% Similarity=0.067 Sum_probs=163.2
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.+...+| +++|...+++. +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+......++++++++
T Consensus 24 ~~~~~~g~~l~y~~~G~g~---~~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~Dl~GhG~S~~~~~~~~~~~~~a~ 98 (318)
T 2psd_A 24 KQMNVLDSFINYYDSEKHA---ENAVIFLHGNATSSY-LWRHVVPHIEPV-ARCIIPDLIGMGKSGKSGNGSYRLLDHYK 98 (318)
T ss_dssp EEEEETTEEEEEEECCSCT---TSEEEEECCTTCCGG-GGTTTGGGTTTT-SEEEEECCTTSTTCCCCTTSCCSHHHHHH
T ss_pred eEEeeCCeEEEEEEcCCCC---CCeEEEECCCCCcHH-HHHHHHHHhhhc-CeEEEEeCCCCCCCCCCCCCccCHHHHHH
Confidence 3444577 99999887642 579999999998876 898899888776 89999999999999865433368999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC---CCCchh-hHHHHHhhhhh-h
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP---ENMKPS-KLHLFMYGLLF-G 187 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~---~~~~~~-~~~~~~~~~~~-~ 187 (323)
|+.++++.+.. ..+++|+||||||.+|+.+|.++|++ |+++|++++..... ...... .....+..... .
T Consensus 99 dl~~ll~~l~~-----~~~~~lvGhSmGg~ia~~~A~~~P~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (318)
T 2psd_A 99 YLTAWFELLNL-----PKKIIFVGHDWGAALAFHYAYEHQDR-IKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEK 172 (318)
T ss_dssp HHHHHHTTSCC-----CSSEEEEEEEHHHHHHHHHHHHCTTS-EEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHH
T ss_pred HHHHHHHhcCC-----CCCeEEEEEChhHHHHHHHHHhChHh-hheEEEeccccCCccchhhhhhHHHHHHHHhcccchh
Confidence 99999998864 13899999999999999999999999 99999987542211 000000 00110000000 0
Q ss_pred hh---cccccCCcccccccccCChHHHHHHhcCCCC-c---------CCCCchh-HHHHHHHHHHHHHhcCCCC-CcCEE
Q 020633 188 LA---DTWAAMPDNKMVGKAIKDPEKLKVIASNPRR-Y---------TGKPRVG-TMREIARVCQYIQDNFSKV-TVPFL 252 (323)
Q Consensus 188 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~P~l 252 (323)
.. ..+............................ . ....... ...............+.++ ++|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~L 252 (318)
T 2psd_A 173 MVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKL 252 (318)
T ss_dssp HHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEE
T ss_pred hhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeE
Confidence 00 0000000000000000001111111100000 0 0000000 0001111112233445677 99999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|+|++| +++. .++.+.+.+ ++.+++++ ++||++++++|++ +.+.|.+||++....
T Consensus 253 vi~G~~D-~~~~-~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~----~~~~i~~fl~~~~~~ 308 (318)
T 2psd_A 253 FIESDPG-FFSN-AIVEGAKKF--PNTEFVKV-KGLHFLQEDAPDE----MGKYIKSFVERVLKN 308 (318)
T ss_dssp EEEEEEC-SSHH-HHHHHHTTS--SSEEEEEE-EESSSGGGTCHHH----HHHHHHHHHHHHHC-
T ss_pred EEEeccc-cCcH-HHHHHHHhC--CCcEEEEe-cCCCCCHhhCHHH----HHHHHHHHHHHhhcc
Confidence 9999999 8877 777787777 77888888 6899999766554 999999999876543
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=232.50 Aligned_cols=262 Identities=15% Similarity=0.164 Sum_probs=172.3
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
++.+..+...+| +|+|...+. +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.... ..++
T Consensus 2 p~i~~~~~~~dG~~l~y~~~G~-----gp~VV~lHG~~~~~~-~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~-~~s~ 74 (456)
T 3vdx_A 2 PFITVGQENSTSIDLYYEDHGT-----GVPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTT-GYDY 74 (456)
T ss_dssp CEEEEEEETTEEEEEEEEEESS-----SEEEEEECCTTCCGG-GGTTHHHHHHHHTEEEEEECCTTSTTSCCCSS-CCSH
T ss_pred CeEeecccccCCeEEEEEEeCC-----CCEEEEECCCCCcHH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCCCC-CCCH
Confidence 345566778889 999988873 589999999998877 88899999988899999999999999986544 3589
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCCCc-------hhhHHH
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMK-------PSKLHL 179 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~~~-------~~~~~~ 179 (323)
+++++|+.++++++.. .+++++|||+||.+++.++..+ |++ |+++|++++......... ......
T Consensus 75 ~~~a~dl~~~l~~l~~------~~v~LvGhS~GG~ia~~~aa~~~p~~-v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 147 (456)
T 3vdx_A 75 DTFAADLNTVLETLDL------QDAVLVGFSMGTGEVARYVSSYGTAR-IAAVAFLASLEPFLLKTDDNPDGAAPQEFFD 147 (456)
T ss_dssp HHHHHHHHHHHHHHTC------CSEEEEEEGGGGHHHHHHHHHHCSSS-EEEEEEESCCCSCCBCCSSCCSCSBCHHHHH
T ss_pred HHHHHHHHHHHHHhCC------CCeEEEEECHHHHHHHHHHHhcchhh-eeEEEEeCCcccccccccccccccchHHHHH
Confidence 9999999999999864 3899999999999999999887 777 999999998764322110 111111
Q ss_pred HHhhhhh--------hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCE
Q 020633 180 FMYGLLF--------GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 180 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
.+..... .+...+.... ....................... .............+....+.++++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~~l~~i~~Pv 221 (456)
T 3vdx_A 148 GIVAAVKADRYAFYTGFFNDFYNLD--ENLGTRISEEAVRNSWNTAASGG----FFAAAAAPTTWYTDFRADIPRIDVPA 221 (456)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTTT--TSBTTTBCHHHHHHHHHHHHTSC----TTHHHHGGGGTTCCCTTTSTTCCSCC
T ss_pred HHHHhhhccchHHHHHHHHHHhccc--ccccccccHHHHHHHhhhccccc----hhhhhhhhhhhhhhHHHHhhhCCCCE
Confidence 1111000 0000000000 00000000011110000000000 00000000000001234567889999
Q ss_pred EEEeeCCCcccCch-hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 252 LTVHGTADGVTCPT-SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 252 l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+|+|++|.++|.+ ..+.+.+.+ +++++++++++||++++++|+ .+.+.|.+||++.+.
T Consensus 222 LiI~G~~D~~vp~~~~~~~l~~~~--~~~~~~~i~gagH~~~~e~p~----~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 222 LILHGTGDRTLPIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHAE----EVNTALLAFLAKALE 281 (456)
T ss_dssp EEEEETTCSSSCGGGTHHHHHHHC--TTSEEEEETTCCSCTTTTTHH----HHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHC--CCceEEEeCCCCCcchhhCHH----HHHHHHHHHHHHhhc
Confidence 99999999999998 667777776 789999999999999865554 488888888887764
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=216.25 Aligned_cols=242 Identities=17% Similarity=0.218 Sum_probs=172.7
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcH
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
...+| +++|. . +++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|..... ..+++++++|+
T Consensus 26 ~~~~g~~~~~~---~---g~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~ 97 (270)
T 3rm3_A 26 PVLSGAEPFYA---E---NGPVGVLLVHGFTGTPH-SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDME-RTTFHDWVASV 97 (270)
T ss_dssp CCCTTCCCEEE---C---CSSEEEEEECCTTCCGG-GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHH-TCCHHHHHHHH
T ss_pred cCCCCCccccc---C---CCCeEEEEECCCCCChh-HHHHHHHHHHHCCCEEEEeCCCCCCCCccccc-cCCHHHHHHHH
Confidence 34567 77664 2 23699999999998887 89999999999999999999999999975332 34899999999
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccccc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAA 194 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
.++++++... ..+++++|||+||.+++.+|..+|+ |+++|+++|....... ... .... .....+..
T Consensus 98 ~~~i~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~------~~~-~~~~-~~~~~~~~ 163 (270)
T 3rm3_A 98 EEGYGWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD--ICGIVPINAAVDIPAI------AAG-MTGG-GELPRYLD 163 (270)
T ss_dssp HHHHHHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCSCCHHH------HHH-SCC----CCSEEE
T ss_pred HHHHHHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC--ccEEEEEcceeccccc------ccc-hhcc-hhHHHHHH
Confidence 9999999854 3389999999999999999999988 9999999987643210 000 0000 00000000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHc
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA 274 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 274 (323)
........... ...............+..........+.++++|+|+++|++|.++|.+.++.+.+.+
T Consensus 164 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~ 231 (270)
T 3rm3_A 164 SIGSDLKNPDV------------KELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI 231 (270)
T ss_dssp CCCCCCSCTTC------------CCCCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHS
T ss_pred HhCccccccch------------HhhcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhc
Confidence 00000000000 000111122334444445555566778889999999999999999999999999998
Q ss_pred CCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 275 SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 275 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
...++++++++++||.++.+.+ .+++.+.|.+||+++
T Consensus 232 ~~~~~~~~~~~~~gH~~~~~~~---~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 232 SSTEKEIVRLRNSYHVATLDYD---QPMIIERSLEFFAKH 268 (270)
T ss_dssp CCSSEEEEEESSCCSCGGGSTT---HHHHHHHHHHHHHHH
T ss_pred CCCcceEEEeCCCCcccccCcc---HHHHHHHHHHHHHhc
Confidence 5555699999999999996554 355899999999876
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=218.04 Aligned_cols=257 Identities=17% Similarity=0.138 Sum_probs=168.1
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDMEK 109 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~ 109 (323)
+.++ ..+| +|+|..+++++ +|+||++||++++.. .|..+++.|.++||.|+++|+||+|.|.... ....++++
T Consensus 6 ~~~~-~~~g~~l~~~~~g~~~---~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~ 80 (286)
T 3qit_A 6 EKFL-EFGGNQICLCSWGSPE---HPVVLCIHGILEQGL-AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLT 80 (286)
T ss_dssp EEEE-EETTEEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHH
T ss_pred hhee-ecCCceEEEeecCCCC---CCEEEEECCCCcccc-hHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHH
Confidence 3444 4466 99999998754 789999999998887 8999999999999999999999999998654 23458899
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+++|+..+++++.. .+++++|||+||.+++.+|.++|++ |+++|++++............ ...+...+....
T Consensus 81 ~~~~~~~~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 152 (286)
T 3qit_A 81 FLAQIDRVIQELPD------QPLLLVGHSMGAMLATAIASVRPKK-IKELILVELPLPAEESKKESA-VNQLTTCLDYLS 152 (286)
T ss_dssp HHHHHHHHHHHSCS------SCEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCCC---CCH-HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCC------CCEEEEEeCHHHHHHHHHHHhChhh-ccEEEEecCCCCCccccchhh-hHHHHHHHHHHh
Confidence 99999999998854 3899999999999999999999998 999999998776544331111 111111111100
Q ss_pred cccc---cCCcc------cccccccCChHHHHHHhcCCCCcC------CCCchhHHHHHHH-----HHHHHHhcCCCCCc
Q 020633 190 DTWA---AMPDN------KMVGKAIKDPEKLKVIASNPRRYT------GKPRVGTMREIAR-----VCQYIQDNFSKVTV 249 (323)
Q Consensus 190 ~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 249 (323)
.... ..... ........................ ............. ...+....+.++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 232 (286)
T 3qit_A 153 STPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQV 232 (286)
T ss_dssp CCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCS
T ss_pred ccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCC
Confidence 0000 00000 000000011111111111110000 0000000000000 22224455677899
Q ss_pred CEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHH
Q 020633 250 PFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~ 308 (323)
|+++|+|++|.++|.+..+.+.+.+ ++++++++++ ||++++++|++ +.+.|.
T Consensus 233 P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~g-gH~~~~e~p~~----~~~~i~ 284 (286)
T 3qit_A 233 PTTLVYGDSSKLNRPEDLQQQKMTM--TQAKRVFLSG-GHNLHIDAAAA----LASLIL 284 (286)
T ss_dssp CEEEEEETTCCSSCHHHHHHHHHHS--TTSEEEEESS-SSCHHHHTHHH----HHHHHH
T ss_pred CeEEEEeCCCcccCHHHHHHHHHHC--CCCeEEEeeC-CchHhhhChHH----HHHHhh
Confidence 9999999999999999999999988 7889999999 99999766655 555443
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=222.96 Aligned_cols=262 Identities=10% Similarity=0.034 Sum_probs=169.8
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc---CCCh
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY---LGDM 107 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~ 107 (323)
+..+...+| +++|..+++ +|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|...... ..++
T Consensus 9 ~~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (297)
T 2qvb_A 9 QPKYLEIAGKRMAYIDEGK-----GDAIVFQHGNPTSSY-LWRNIMPHLEGL-GRLVACDLIGMGASDKLSPSGPDRYSY 81 (297)
T ss_dssp CCEEEEETTEEEEEEEESS-----SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCH
T ss_pred CceEEEECCEEEEEEecCC-----CCeEEEECCCCchHH-HHHHHHHHHhhc-CeEEEEcCCCCCCCCCCCCccccCcCH
Confidence 344455678 999999875 479999999998877 788888888765 99999999999999865321 1589
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC--chh--hHHHHHhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KPS--KLHLFMYG 183 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~--~~~--~~~~~~~~ 183 (323)
+++++|+.++++++.. ..+++++||||||.+++.+|.++|++ |+++|+++|........ ... .....+..
T Consensus 82 ~~~~~~~~~~l~~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
T 2qvb_A 82 GEQRDFLFALWDALDL-----GDHVVLVLHDWGSALGFDWANQHRDR-VQGIAFMEAIVTPMTWADWPPAVRGVFQGFRS 155 (297)
T ss_dssp HHHHHHHHHHHHHTTC-----CSCEEEEEEEHHHHHHHHHHHHSGGG-EEEEEEEEECCSCBCGGGSCGGGHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCC-----CCceEEEEeCchHHHHHHHHHhChHh-hheeeEeccccCCccCCCCChHHHHHHHHHhc
Confidence 9999999999999864 13899999999999999999999998 99999999866422110 000 00000000
Q ss_pred hhh-hhhc---ccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH-------------HHHHHHHhcCCC
Q 020633 184 LLF-GLAD---TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-------------RVCQYIQDNFSK 246 (323)
Q Consensus 184 ~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 246 (323)
... .... .+............................ ........... ....+....+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (297)
T 2qvb_A 156 PQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNG---GEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEE 232 (297)
T ss_dssp TTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSS---SGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCc---ccchhhHHHHHHhccccCCchhhHHHHHHHHhhccc
Confidence 000 0000 000000000000001111111111110000 00011111111 112223455677
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+++|+|+|+|++|.++|.+..+.+.+.+ ++ +++++ ++||++++++|+ ++.+.|.+||++....
T Consensus 233 i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~-~~~~~-~~gH~~~~~~p~----~~~~~i~~fl~~~~~~ 295 (297)
T 2qvb_A 233 TDMPKLFINAEPGAIITGRIRDYVRSWP--NQ-TEITV-PGVHFVQEDSPE----EIGAAIAQFVRRLRSA 295 (297)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHTSS--SE-EEEEE-EESSCGGGTCHH----HHHHHHHHHHHHHHHH
T ss_pred ccccEEEEecCCCCcCCHHHHHHHHHHc--CC-eEEEe-cCccchhhhCHH----HHHHHHHHHHHHHhhc
Confidence 8999999999999999999999998887 67 99999 999999976554 4999999999887543
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=219.39 Aligned_cols=259 Identities=15% Similarity=0.128 Sum_probs=158.1
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc----CCC
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY----LGD 106 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~ 106 (323)
+..+...+| +++|..++. +|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|+..... .++
T Consensus 14 ~~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 86 (306)
T 3r40_A 14 GSEWINTSSGRIFARVGGD-----GPPLLLLHGFPQTHV-MWHRVAPKLAE-RFKVIVADLPGYGWSDMPESDEQHTPYT 86 (306)
T ss_dssp EEEEECCTTCCEEEEEEEC-----SSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCCTTCGGGS
T ss_pred ceEEEEeCCEEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCCcccCCCC
Confidence 344455577 999999873 579999999998887 89999999987 899999999999999876542 458
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH-Hh---
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF-MY--- 182 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~--- 182 (323)
++++++|+.++++++..+ +++|+|||+||.+++.+|.++|++ |+++|++++................ ..
T Consensus 87 ~~~~~~~~~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T 3r40_A 87 KRAMAKQLIEAMEQLGHV------HFALAGHNRGARVSYRLALDSPGR-LSKLAVLDILPTYEYWQRMNRAYALKIYHWS 159 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCHHHHHHHCSHHHHHHSTHHH
T ss_pred HHHHHHHHHHHHHHhCCC------CEEEEEecchHHHHHHHHHhChhh-ccEEEEecCCCCccchhhhhhhhhhhhHHHH
Confidence 999999999999998643 899999999999999999999998 9999999974321100000000000 00
Q ss_pred --hhhhhhhcccccCCcc--------cccc---cccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--------HHHH
Q 020633 183 --GLLFGLADTWAAMPDN--------KMVG---KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--------QYIQ 241 (323)
Q Consensus 183 --~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 241 (323)
................ .... ...........+.... ................ ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (306)
T 3r40_A 160 FLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAF---ADPMRRHVMCEDYRAGAYADFEHDKIDV 236 (306)
T ss_dssp HHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHH---TSHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHH---ccCCCcchhhHHHHhcccccchhhhhhh
Confidence 0000000000000000 0000 0000111111110000 0000000001111100 0011
Q ss_pred hcCCCCCcCEEEEeeCCCcccC-chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 242 DNFSKVTVPFLTVHGTADGVTC-PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+.++++|+|+|+|++|.+++ ....+.+.+.. ++.+++++ ++||+.++++| +++.+.|.+||++.
T Consensus 237 ~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~-~~gH~~~~e~p----~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 237 EAGNKIPVPMLALWGASGIAQSAATPLDVWRKWA--SDVQGAPI-ESGHFLPEEAP----DQTAEALVRFFSAA 303 (306)
T ss_dssp HHTCCBCSCEEEEEETTCC------CHHHHHHHB--SSEEEEEE-SSCSCHHHHSH----HHHHHHHHHHHHC-
T ss_pred hhccCCCcceEEEEecCCcccCchhHHHHHHhhc--CCCeEEEe-cCCcCchhhCh----HHHHHHHHHHHHhc
Confidence 2568899999999999999998 45555555555 67888888 68999996555 45999999999865
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=221.71 Aligned_cols=253 Identities=17% Similarity=0.193 Sum_probs=166.4
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccCCC
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYLGD 106 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~ 106 (323)
.+.+..++...+|+++|+.+++.+ +++|||+||++++.. .|..+++.|++ ||+|+++|+||+ |.|.... ...+
T Consensus 43 ~~~~~~~v~~~~~~~~~~~~g~~~---~~~vv~lHG~~~~~~-~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~-~~~~ 116 (306)
T 2r11_A 43 VRCKSFYISTRFGQTHVIASGPED---APPLVLLHGALFSST-MWYPNIADWSS-KYRTYAVDIIGDKNKSIPEN-VSGT 116 (306)
T ss_dssp SCCEEEEECCTTEEEEEEEESCTT---SCEEEEECCTTTCGG-GGTTTHHHHHH-HSEEEEECCTTSSSSCEECS-CCCC
T ss_pred CCcceEEEecCCceEEEEeeCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEecCCCCCCCCCCCC-CCCC
Confidence 334556666655599999887643 689999999998877 78888999987 899999999999 8776532 2358
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
++++++|+.++++++..+ +++|+|||+||.+|+.+|.++|++ |+++|+++|.......... ..........
T Consensus 117 ~~~~~~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~ 187 (306)
T 2r11_A 117 RTDYANWLLDVFDNLGIE------KSHMIGLSLGGLHTMNFLLRMPER-VKSAAILSPAETFLPFHHD--FYKYALGLTA 187 (306)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSSBTSCCCHH--HHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhcCCC------ceeEEEECHHHHHHHHHHHhCccc-eeeEEEEcCccccCcccHH--HHHHHhHHHH
Confidence 999999999999998743 899999999999999999999998 9999999988765322111 1111100000
Q ss_pred hh----hcccccCCcccccccccCChHH---HHHHhcCCCCcCCCC-chhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 187 GL----ADTWAAMPDNKMVGKAIKDPEK---LKVIASNPRRYTGKP-RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 187 ~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.. ...+..... ....... ............... ....... ......+.++++|+|+++|++
T Consensus 188 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~P~lii~G~~ 256 (306)
T 2r11_A 188 SNGVETFLNWMMNDQ------NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPY-----VFTDEELRSARVPILLLLGEH 256 (306)
T ss_dssp TTHHHHHHHHHTTTC------CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSC-----BCCHHHHHTCCSCEEEEEETT
T ss_pred HHHHHHHHHHhhCCc------cccccccccccHHHHHHHHhhhhhhhhccCCCC-----CCCHHHHhcCCCCEEEEEeCC
Confidence 00 000000000 0000000 000000000000000 0000000 001233567899999999999
Q ss_pred CcccCchhHHHHHH-HcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYE-KASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|.+.+.+..+ .+ +++++++++++||++++++| +++.+.|.+||+
T Consensus 257 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 305 (306)
T 2r11_A 257 EVIYDPHSALHRASSFV--PDIEAEVIKNAGHVLSMEQP----TYVNERVMRFFN 305 (306)
T ss_dssp CCSSCHHHHHHHHHHHS--TTCEEEEETTCCTTHHHHSH----HHHHHHHHHHHC
T ss_pred CcccCHHHHHHHHHHHC--CCCEEEEeCCCCCCCcccCH----HHHHHHHHHHHh
Confidence 99999888875554 45 78999999999999996554 458999999985
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=211.28 Aligned_cols=242 Identities=17% Similarity=0.192 Sum_probs=165.6
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
.+.+| +|+|..+.+.+ .++|+||++||++++.. +.+..+...|.+.||.|+++|+||+|.|...... .+++++++|
T Consensus 18 ~~~~g~~l~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~d 95 (270)
T 3llc_A 18 QGSDARSIAALVRAPAQ-DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRD-GTISRWLEE 95 (270)
T ss_dssp SGGGCEEEEEEEECCSS-TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGG-CCHHHHHHH
T ss_pred eccCcceEEEEeccCCC-CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCcccc-ccHHHHHHH
Confidence 34688 99998777653 44799999999998753 2455578888888999999999999999865433 489999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh---cC---CCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ---SE---PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p---~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
+.++++++.. .+++++|||+||.+++.++.+ +| ++ |+++|+++|....................+..
T Consensus 96 ~~~~~~~l~~------~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (270)
T 3llc_A 96 ALAVLDHFKP------EKAILVGSSMGGWIALRLIQELKARHDNPTQ-VSGMVLIAPAPDFTSDLIEPLLGDRERAELAE 168 (270)
T ss_dssp HHHHHHHHCC------SEEEEEEETHHHHHHHHHHHHHHTCSCCSCE-EEEEEEESCCTTHHHHTTGGGCCHHHHHHHHH
T ss_pred HHHHHHHhcc------CCeEEEEeChHHHHHHHHHHHHHhccccccc-cceeEEecCcccchhhhhhhhhhhhhhhhhhc
Confidence 9999999873 389999999999999999999 99 77 99999999875432111000000000000000
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH--HHhcCCCCCcCEEEEeeCCCcccCch
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY--IQDNFSKVTVPFLTVHGTADGVTCPT 265 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~ 265 (323)
.. ... ....+... .......+...... ....+.++++|+++++|++|.++|.+
T Consensus 169 ~~-~~~-----------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~ 223 (270)
T 3llc_A 169 NG-YFE-----------------------EVSEYSPE-PNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQ 223 (270)
T ss_dssp HS-EEE-----------------------ECCTTCSS-CEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHH
T ss_pred cC-ccc-----------------------Chhhcccc-hhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHH
Confidence 00 000 00000000 00000111111110 23556788999999999999999999
Q ss_pred hHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 266 SSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.++.+.+.+...++++++++++||.+.. ++..+++.+.|.+||+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 224 HALKLVEHLPADDVVLTLVRDGDHRLSR---PQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp HHHHHHHTSCSSSEEEEEETTCCSSCCS---HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCCCCeeEEEeCCCcccccc---cccHHHHHHHHHHHhcCC
Confidence 9999999984444899999999996552 456778999999998753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=236.01 Aligned_cols=270 Identities=15% Similarity=0.113 Sum_probs=180.0
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~ 106 (323)
..+..++.+.+| +++|..+++ +|+||++||++++.. .|..+++.|+++||+|+++|+||||.|..... ..++
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g~-----~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~ 309 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELGS-----GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYC 309 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEECS-----SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGS
T ss_pred ccceeEEEeCCCcEEEEEEcCC-----CCEEEEEeCCCCchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCccccc
Confidence 345677888899 999999873 579999999998877 89999999999999999999999999986543 2357
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH--------
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH-------- 178 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~-------- 178 (323)
++++++|+.++++++.. .+++++|||+||.+++.+|.++|++ |+++|++++..............
T Consensus 310 ~~~~~~d~~~~~~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (555)
T 3i28_A 310 MEVLCKEMVTFLDKLGL------SQAVFIGHDWGGMLVWYMALFYPER-VRAVASLNTPFIPANPNMSPLESIKANPVFD 382 (555)
T ss_dssp HHHHHHHHHHHHHHHTC------SCEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCCCTTSCHHHHHHTCGGGH
T ss_pred HHHHHHHHHHHHHHcCC------CcEEEEEecHHHHHHHHHHHhChHh-eeEEEEEccCCCCCCcccchHHHHhcCCccc
Confidence 89999999999999864 3899999999999999999999998 99999998865543322111100
Q ss_pred ------------HHHhhhhhhhhcccccCCcc---------------------cccccccCChHHHHHHhcCCCCcCCCC
Q 020633 179 ------------LFMYGLLFGLADTWAAMPDN---------------------KMVGKAIKDPEKLKVIASNPRRYTGKP 225 (323)
Q Consensus 179 ------------~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (323)
......+............. ...................... ....
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 461 (555)
T 3i28_A 383 YQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS-GFRG 461 (555)
T ss_dssp HHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTT-TTHH
T ss_pred hhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcc-cchh
Confidence 00000000110000000000 0000000111111111100000 0000
Q ss_pred chhHHHHHHHH-HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHH
Q 020633 226 RVGTMREIARV-CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304 (323)
Q Consensus 226 ~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 304 (323)
...+....... .......+.++++|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||+.++++| +++.
T Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p----~~~~ 535 (555)
T 3i28_A 462 PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDKP----TEVN 535 (555)
T ss_dssp HHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC--TTCEEEEETTCCSCHHHHSH----HHHH
T ss_pred HHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC--CCceEEEeCCCCCCcchhCH----HHHH
Confidence 00000000000 11234567789999999999999999999999888888 78999999999999996555 4599
Q ss_pred HHHHHHHHHHHhhc
Q 020633 305 KDMREWIDERVERY 318 (323)
Q Consensus 305 ~~i~~fl~~~~~~~ 318 (323)
+.|.+||++.....
T Consensus 536 ~~i~~fl~~~~~~~ 549 (555)
T 3i28_A 536 QILIKWLDSDARNP 549 (555)
T ss_dssp HHHHHHHHHHTCC-
T ss_pred HHHHHHHHhccCCC
Confidence 99999999886543
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=212.81 Aligned_cols=226 Identities=17% Similarity=0.224 Sum_probs=165.5
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC-ChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG-DMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
++++||++||++++.. .|..+++.|+++||.|+++|+||||.|+....... +++++++|+.++++++... ..++
T Consensus 21 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~ 95 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN-DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK----YAKV 95 (251)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT----CSEE
T ss_pred CCceEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh----cCCe
Confidence 4689999999998887 89999999999999999999999999965443333 7888999999999999876 4489
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHH
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK 212 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (323)
+++|||+||.+++.++.++|+. ++++++++|............ ......+.... .... .......
T Consensus 96 ~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~p~~~~~~~~~~~~--~~~~~~~~~~~---~~~~---------~~~~~~~ 160 (251)
T 3dkr_A 96 FVFGLSLGGIFAMKALETLPGI-TAGGVFSSPILPGKHHLVPGF--LKYAEYMNRLA---GKSD---------ESTQILA 160 (251)
T ss_dssp EEEESHHHHHHHHHHHHHCSSC-CEEEESSCCCCTTCBCHHHHH--HHHHHHHHHHH---TCCC---------CHHHHHH
T ss_pred EEEEechHHHHHHHHHHhCccc-eeeEEEecchhhccchhhHHH--HHHHHHHHhhc---ccCc---------chhhHHh
Confidence 9999999999999999999998 999999998776443221111 11111111111 0000 0000000
Q ss_pred HHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC-CCccEEEecCCCccc
Q 020633 213 VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS-ADKSIKIYDGMYHSL 291 (323)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 291 (323)
. .......+..........+.++++|+++++|++|.+++.+.++.+.+.+.. .++++++++++||..
T Consensus 161 ~------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 228 (251)
T 3dkr_A 161 Y------------LPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVI 228 (251)
T ss_dssp H------------HHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCT
T ss_pred h------------hHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCccc
Confidence 0 011122222333334567788999999999999999999999999999965 556999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHH
Q 020633 292 IQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+. ..+++.+.|.+||++.
T Consensus 229 ~~~~---~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 229 TVNS---AHHALEEDVIAFMQQE 248 (251)
T ss_dssp TTST---THHHHHHHHHHHHHTT
T ss_pred cccc---chhHHHHHHHHHHHhh
Confidence 8542 3566999999999864
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=217.06 Aligned_cols=242 Identities=15% Similarity=0.103 Sum_probs=157.8
Q ss_pred CcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHH-HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 40 GKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKIC-ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 40 g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
.+++|..++++ .++|||+||++ ++.. .|..++ +.|.+. |+|+++|+||||.|+......++++++++|+.
T Consensus 25 ~~l~y~~~g~g----~~~vvllHG~~~~~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~ 98 (289)
T 1u2e_A 25 LRIHFNDCGQG----DETVVLLHGSGPGATGWA-NFSRNIDPLVEAG-YRVILLDCPGWGKSDSVVNSGSRSDLNARILK 98 (289)
T ss_dssp EEEEEEEECCC----SSEEEEECCCSTTCCHHH-HTTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHHH
T ss_pred EEEEEeccCCC----CceEEEECCCCcccchhH-HHHHhhhHHHhcC-CeEEEEcCCCCCCCCCCCccccCHHHHHHHHH
Confidence 37888887642 24899999997 4444 666677 778765 99999999999999875543458899999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc--hhhHHHHHhhhhh-------
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK--PSKLHLFMYGLLF------- 186 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~------- 186 (323)
++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++......... .......+.....
T Consensus 99 ~~l~~l~~~------~~~lvGhS~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1u2e_A 99 SVVDQLDIA------KIHLLGNSMGGHSSVAFTLKWPER-VGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENL 171 (289)
T ss_dssp HHHHHTTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHhCCC------ceEEEEECHhHHHHHHHHHHCHHh-hhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHH
Confidence 999988643 899999999999999999999998 999999988653221111 0000111111000
Q ss_pred -hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH-------HHHhcCCCCCcCEEEEeeCC
Q 020633 187 -GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-------YIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~P~l~i~g~~ 258 (323)
.......... ............... .. .......+..... +....+.++++|+|+|+|++
T Consensus 172 ~~~~~~~~~~~------~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 239 (289)
T 1u2e_A 172 KLMMDIFVFDT------SDLTDALFEARLNNM----LS--RRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRN 239 (289)
T ss_dssp HHHHHTTSSCT------TSCCHHHHHHHHHHH----HH--THHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETT
T ss_pred HHHHHHhhcCc------ccCCHHHHHHHHHHh----hc--ChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCC
Confidence 0000000000 000000000000000 00 0000111111100 01245678899999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|.+.++.+.+.+ +++++++++++||+.++++|+ ++.+.|.+||+
T Consensus 240 D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~ 287 (289)
T 1u2e_A 240 DRFVPMDAGLRLLSGI--AGSELHIFRDCGHWAQWEHAD----AFNQLVLNFLA 287 (289)
T ss_dssp CSSSCTHHHHHHHHHS--TTCEEEEESSCCSCHHHHTHH----HHHHHHHHHHT
T ss_pred CCccCHHHHHHHHhhC--CCcEEEEeCCCCCchhhcCHH----HHHHHHHHHhc
Confidence 9999999999999988 789999999999999966554 48889999985
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=227.46 Aligned_cols=277 Identities=14% Similarity=0.126 Sum_probs=176.2
Q ss_pred eeEEEcCCC-cEEEEEecCCC------CCcceEEEEecCCCCCccccHHHHHHHHh----hCCc---EEEEecCCCCcCC
Q 020633 32 KKYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYGSDTGWMFQKICISFA----TWGY---AVFAADLLGHGRS 97 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~HG~~~~~~~~~~~~~~~l~----~~g~---~v~~~d~~G~G~s 97 (323)
+..+...+| +|+|..+++.+ .+++|+|||+||++++.. .|..+++.|+ +.|| +|+++|+||||.|
T Consensus 22 ~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S 100 (398)
T 2y6u_A 22 QSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDS 100 (398)
T ss_dssp TSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHH
T ss_pred CccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCC
Confidence 344567789 99999999764 135689999999998887 8888899998 3489 9999999999999
Q ss_pred CCCc----ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCC--
Q 020633 98 DGIR----CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN-- 171 (323)
Q Consensus 98 ~~~~----~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~-- 171 (323)
.... ...++++++++|+.++++.+....+.+..+++|+||||||.+++.+|.++|++ |+++|+++|.......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~ 179 (398)
T 2y6u_A 101 AVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNL-FHLLILIEPVVITRKAIG 179 (398)
T ss_dssp HHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCSCCCCCS
T ss_pred CCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchh-eeEEEEeccccccccccc
Confidence 7432 23458999999999999986521111122499999999999999999999998 9999999987654210
Q ss_pred -----Cc------hhhHHHHHhhhhhhhhcccc---cCCcccccccccCChHHHHHHhcC-----------CCCcCCCCc
Q 020633 172 -----MK------PSKLHLFMYGLLFGLADTWA---AMPDNKMVGKAIKDPEKLKVIASN-----------PRRYTGKPR 226 (323)
Q Consensus 172 -----~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 226 (323)
.. .......+............ .......... ..++.....+... ...+.....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 180 AGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFT-NAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp CCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTT-TSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred cccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccc-cCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 00 00011111110000000000 0000000000 0111111111100 000000000
Q ss_pred hh-HHH---HHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHH
Q 020633 227 VG-TMR---EIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANL 302 (323)
Q Consensus 227 ~~-~~~---~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 302 (323)
.. ... .+..........+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||++++++| ++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~--~~~~~~~~~~~gH~~~~e~p----~~ 332 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL--QNYHLDVIPGGSHLVNVEAP----DL 332 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC--SSEEEEEETTCCTTHHHHSH----HH
T ss_pred chhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC--CCceEEEeCCCCccchhcCH----HH
Confidence 00 000 0000111234567889999999999999999999999999998 78999999999999996554 45
Q ss_pred HHHHHHHHHHHHHhh
Q 020633 303 VLKDMREWIDERVER 317 (323)
Q Consensus 303 ~~~~i~~fl~~~~~~ 317 (323)
+.+.|.+||.+.+..
T Consensus 333 ~~~~i~~fl~~~~~~ 347 (398)
T 2y6u_A 333 VIERINHHIHEFVLT 347 (398)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888998887654
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=228.82 Aligned_cols=272 Identities=12% Similarity=0.046 Sum_probs=167.5
Q ss_pred eEEEcCCC-----cEEEEEecCCCCCcceEEEEecCCCCCcccc-------------HHHHH---HHHhhCCcEEEEecC
Q 020633 33 KYFETPNG-----KLFTQSFLPLDQKVKATVYMTHGYGSDTGWM-------------FQKIC---ISFATWGYAVFAADL 91 (323)
Q Consensus 33 ~~~~~~~g-----~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~-------------~~~~~---~~l~~~g~~v~~~d~ 91 (323)
..+.+.+| +|+|..+++.++.++|+|||+||++++.. . |..++ +.|..+||+|+++|+
T Consensus 15 ~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~ 93 (377)
T 3i1i_A 15 KEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSH-AAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDN 93 (377)
T ss_dssp EEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSC-CSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECC
T ss_pred cceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcch-hccccccccccccchhhhcCCCCccccccEEEEEecc
Confidence 34555554 56899998765455799999999998855 3 66666 677778999999999
Q ss_pred CCCcCCCC-------Ccc-------------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhh
Q 020633 92 LGHGRSDG-------IRC-------------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQ 150 (323)
Q Consensus 92 ~G~G~s~~-------~~~-------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~ 150 (323)
||||.|.+ ... ..++++++++|+.++++++..+ +++ |+||||||.+|+.+|.+
T Consensus 94 ~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~------~~~ilvGhS~Gg~ia~~~a~~ 167 (377)
T 3i1i_A 94 LCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIA------RLHAVMGPSAGGMIAQQWAVH 167 (377)
T ss_dssp TTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCC------CBSEEEEETHHHHHHHHHHHH
T ss_pred cccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCC------cEeeEEeeCHhHHHHHHHHHH
Confidence 99987431 100 1348899999999999988754 675 99999999999999999
Q ss_pred cCCCceeEEEE-ccCcccCCCCCchhh-HHHHHhhhhhhhhccccc--CC----------------cccc----ccc---
Q 020633 151 SEPNTWTGLIF-SAPLFVIPENMKPSK-LHLFMYGLLFGLADTWAA--MP----------------DNKM----VGK--- 203 (323)
Q Consensus 151 ~p~~~v~~~vl-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~----------------~~~~----~~~--- 203 (323)
+|++ |+++|+ +++............ ...........+...... .+ .... ...
T Consensus 168 ~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (377)
T 3i1i_A 168 YPHM-VERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSI 246 (377)
T ss_dssp CTTT-BSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSS
T ss_pred ChHH-HHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhc
Confidence 9999 999999 776543111000000 000000000000000000 00 0000 000
Q ss_pred ------ccC-ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH---------HHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 204 ------AIK-DPEKLKVIASNPRRYTGKPRVGTMREIARVCQY---------IQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 204 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
... ................................. ....+.++++|+|+|+|++|.++|++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~ 326 (377)
T 3i1i_A 247 EVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYN 326 (377)
T ss_dssp CCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHH
T ss_pred cccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHH
Confidence 000 000111111000000111111112222221111 1345578899999999999999999999
Q ss_pred HHHHHHcCC--CCccEEEecC-CCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 268 KLLYEKASS--ADKSIKIYDG-MYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+.+.+.. ++++++++++ +||+.++++|++ +.+.|.+||++++.
T Consensus 327 ~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~----~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 327 YKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHL----FEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGG----THHHHHHHHHSCCS
T ss_pred HHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHH----HHHHHHHHHHhhhh
Confidence 999888732 6789999998 999999777766 88999999987653
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-34 Score=224.30 Aligned_cols=249 Identities=13% Similarity=0.091 Sum_probs=164.6
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHH-HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
...+| +++|...+. +|+|||+||++++.. .|. .+...|.+.||+|+++|+||+|.|..... .+++++++|
T Consensus 28 ~~~~~~~l~y~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~ 99 (293)
T 3hss_A 28 PEFRVINLAYDDNGT-----GDPVVFIAGRGGAGR-TWHPHQVPAFLAAGYRCITFDNRGIGATENAEG--FTTQTMVAD 99 (293)
T ss_dssp TTSCEEEEEEEEECS-----SEEEEEECCTTCCGG-GGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCS--CCHHHHHHH
T ss_pred cccccceEEEEEcCC-----CCEEEEECCCCCchh-hcchhhhhhHhhcCCeEEEEccCCCCCCCCccc--CCHHHHHHH
Confidence 34466 899888773 579999999998877 777 67888888899999999999999976543 489999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+.++++++.. .+++|+|||+||.+++.+|.++|++ |+++|+++|.......... ................
T Consensus 100 ~~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 169 (293)
T 3hss_A 100 TAALIETLDI------APARVVGVSMGAFIAQELMVVAPEL-VSSAVLMATRGRLDRARQF---FNKAEAELYDSGVQLP 169 (293)
T ss_dssp HHHHHHHHTC------CSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCHHHHH---HHHHHHHHHHHTCCCC
T ss_pred HHHHHHhcCC------CcEEEEeeCccHHHHHHHHHHChHH-HHhhheecccccCChhhhH---HHHHHHHHHhhcccch
Confidence 9999999964 3899999999999999999999998 9999999987643321100 0000000000000000
Q ss_pred c------CCcccccccccCChHH----HHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 194 A------MPDNKMVGKAIKDPEK----LKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 194 ~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
. ................ .......... ............ ......+.++++|+|+|+|++|.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~ 244 (293)
T 3hss_A 170 PTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIK-----STPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVV 244 (293)
T ss_dssp HHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCC-----CCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSS
T ss_pred hhHHHHHHHhhhcccccccccccHHHHHHHHhhcccc-----ccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCC
Confidence 0 0000000000000000 0000000000 000000000000 001234577899999999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+|.+.++.+.+.+ +++++++++++||+.++++| +++.+.|.+||++
T Consensus 245 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~ 290 (293)
T 3hss_A 245 TPPYLGREVADAL--PNGRYLQIPDAGHLGFFERP----EAVNTAMLKFFAS 290 (293)
T ss_dssp SCHHHHHHHHHHS--TTEEEEEETTCCTTHHHHSH----HHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHC--CCceEEEeCCCcchHhhhCH----HHHHHHHHHHHHh
Confidence 9999999999998 78999999999999996555 4589999999975
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=220.85 Aligned_cols=123 Identities=18% Similarity=0.250 Sum_probs=105.6
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChHHHhh
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDMEKVAA 112 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~ 112 (323)
+...+| +++|..+++.+ ..+|+||++||++++.. .|..+++.|+++||+|+++|+||||.|..... ..++++++++
T Consensus 7 ~~~~~g~~l~y~~~G~~~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~ 84 (356)
T 2e3j_A 7 ILNCRGTRIHAVADSPPD-QQGPLVVLLHGFPESWY-SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVG 84 (356)
T ss_dssp EEEETTEEEEEEEECCTT-CCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHH
T ss_pred EEccCCeEEEEEEecCCC-CCCCEEEEECCCCCcHH-HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHH
Confidence 344577 99999999753 34789999999998877 88889999988899999999999999986542 2348899999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
|+.++++.+.. .+++++||||||.+++.+|.++|++ |+++|++++..
T Consensus 85 ~~~~~~~~l~~------~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~ 131 (356)
T 2e3j_A 85 DVVGVLDSYGA------EQAFVVGHDWGAPVAWTFAWLHPDR-CAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHHTTC------SCEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESSCC
T ss_pred HHHHHHHHcCC------CCeEEEEECHhHHHHHHHHHhCcHh-hcEEEEECCcc
Confidence 99999998864 3899999999999999999999998 99999998765
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-31 Score=202.82 Aligned_cols=210 Identities=17% Similarity=0.203 Sum_probs=165.7
Q ss_pred cCcccc--eeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCc----cccHHHHHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 26 QGVRNG--KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDT----GWMFQKICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 26 ~~~~~~--~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~----~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
.+.+++ +..+...+|+|.++.+.+.+ +++|+||++||+++.. ...|..+++.|+++||.|+++|+||+|.|..
T Consensus 17 ~~~~~e~~~~~~~~~~g~l~~~~~~p~~-~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~ 95 (249)
T 2i3d_A 17 LYFQGHMPEVIFNGPAGRLEGRYQPSKE-KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQG 95 (249)
T ss_dssp -------CEEEEEETTEEEEEEEECCSS-TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCS
T ss_pred ccccCceeEEEEECCCceEEEEEEcCCC-CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCC
Confidence 345566 88899888888888888765 6689999999985332 2246788999999999999999999999976
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~ 179 (323)
.... ..... +|+.++++++..... +..+++++|||+||.+++.++..+|+ ++++|+++|......
T Consensus 96 ~~~~--~~~~~-~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~--------- 160 (249)
T 2i3d_A 96 EFDH--GAGEL-SDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE--IEGFMSIAPQPNTYD--------- 160 (249)
T ss_dssp CCCS--SHHHH-HHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT--EEEEEEESCCTTTSC---------
T ss_pred CCCC--ccchH-HHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC--ccEEEEEcCchhhhh---------
Confidence 5432 45555 999999999987643 34589999999999999999999987 999999998754210
Q ss_pred HHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCC
Q 020633 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTAD 259 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 259 (323)
...+.++++|+++++|++|
T Consensus 161 -------------------------------------------------------------~~~~~~~~~P~lii~G~~D 179 (249)
T 2i3d_A 161 -------------------------------------------------------------FSFLAPCPSSGLIINGDAD 179 (249)
T ss_dssp -------------------------------------------------------------CTTCTTCCSCEEEEEETTC
T ss_pred -------------------------------------------------------------hhhhcccCCCEEEEEcCCC
Confidence 1234567899999999999
Q ss_pred cccCchhHHHHHHHcCCC---CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 260 GVTCPTSSKLLYEKASSA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+++.+.++.+.+.+... ++++++++++||.+. + ..+++.+.+.+||++++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~----~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 180 KVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-G----KVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp SSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-T----CHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-c----CHHHHHHHHHHHHHHhcCC
Confidence 999999999999988421 689999999999987 4 3455999999999998864
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=224.40 Aligned_cols=283 Identities=12% Similarity=0.086 Sum_probs=179.8
Q ss_pred cccccccCcccceeEEEcCCC-cEEEEEecCCCC-----CcceEEEEecCCCCCccccHHH------HHHHHhhCCcEEE
Q 020633 20 EEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQ-----KVKATVYMTHGYGSDTGWMFQK------ICISFATWGYAVF 87 (323)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~-----~~~~~vv~~HG~~~~~~~~~~~------~~~~l~~~g~~v~ 87 (323)
.+.....+++.+.+.+.+.|| +|++..+.+... +++|+||++||++++.. .|.. ++..|+++||+|+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~-~~~~~~~~~~~a~~l~~~G~~vi 95 (377)
T 1k8q_A 17 SQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGYDVW 95 (377)
T ss_dssp HHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh-hhhcCCCcccHHHHHHHCCCCEE
Confidence 445556778889999999999 999998866531 26899999999998765 5543 4458989999999
Q ss_pred EecCCCCcCCCCC-----ccc---CCChHHHhh-cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC---Cc
Q 020633 88 AADLLGHGRSDGI-----RCY---LGDMEKVAA-SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP---NT 155 (323)
Q Consensus 88 ~~d~~G~G~s~~~-----~~~---~~~~~~~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~ 155 (323)
++|+||||.|... ... .++++++++ |+.++++++....+ ..+++++||||||.+++.+|.++|+ +
T Consensus 96 ~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~- 172 (377)
T 1k8q_A 96 LGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFSTNPKLAKR- 172 (377)
T ss_dssp ECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHHCHHHHTT-
T ss_pred EecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcC--cCceEEEEechhhHHHHHHHhcCchhhhh-
Confidence 9999999999752 111 358899998 99999887655433 4589999999999999999999997 7
Q ss_pred eeEEEEccCcccCCCCCchhhHHHHHh-hhhhhhhcccccCCccc----------------------------ccccccC
Q 020633 156 WTGLIFSAPLFVIPENMKPSKLHLFMY-GLLFGLADTWAAMPDNK----------------------------MVGKAIK 206 (323)
Q Consensus 156 v~~~vl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~ 206 (323)
|+++|+++|.................. ..+..........+... .......
T Consensus 173 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T 1k8q_A 173 IKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLN 252 (377)
T ss_dssp EEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSC
T ss_pred hhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCC
Confidence 999999998765432211110000000 00000000000000000 0000000
Q ss_pred ChHHHHHHhcCCCCcCCCCchhHHHHHHHH-----------------HHHH------HhcCCCCCcCEEEEeeCCCcccC
Q 020633 207 DPEKLKVIASNPRRYTGKPRVGTMREIARV-----------------CQYI------QDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~------~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
...........+ ..........+... .... ...+.++++|+|+|+|++|.++|
T Consensus 253 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 328 (377)
T 1k8q_A 253 MSRLDVYLSHNP----AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGGHHHHHTTCC----CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHhccCC----CCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccC
Confidence 011111111100 00000111111000 0000 12367889999999999999999
Q ss_pred chhHHHHHHHcCCCCcc-EEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKS-IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.++.+.+.+ ++.+ +++++++||+.++.. ++..+++.+.|.+||++
T Consensus 329 ~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 329 PHDVDLLLSKL--PNLIYHRKIPPYNHLDFIWA-MDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHHHHHTTC--TTEEEEEEETTCCTTHHHHC-TTHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHhC--cCcccEEecCCCCceEEEec-CCcHHHHHHHHHHHhcc
Confidence 99999999888 6666 999999999998521 13456699999999974
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=220.65 Aligned_cols=243 Identities=16% Similarity=0.188 Sum_probs=163.2
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHH
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 115 (323)
..++ +|+|..+++. +|+|||+||++++.. .|..++..| ||+|+++|+||+|.|+......++++++++|+.
T Consensus 66 ~~~~~~~~~~~~g~~----~~~vv~~hG~~~~~~-~~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~ 137 (330)
T 3p2m_A 66 RVQAGAISALRWGGS----APRVIFLHGGGQNAH-TWDTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNSETLA 137 (330)
T ss_dssp EEEETTEEEEEESSS----CCSEEEECCTTCCGG-GGHHHHHHS---CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHH
T ss_pred eecCceEEEEEeCCC----CCeEEEECCCCCccc-hHHHHHHHc---CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 3445 9999999865 578999999998887 788888877 799999999999999865555668999999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc---
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW--- 192 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 192 (323)
++++++..+ +++|+|||+||.+|+.+|.++|++ |+++|++++...... ................
T Consensus 138 ~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 204 (330)
T 3p2m_A 138 PVLRELAPG------AEFVVGMSLGGLTAIRLAAMAPDL-VGELVLVDVTPSALQ------RHAELTAEQRGTVALMHGE 204 (330)
T ss_dssp HHHHHSSTT------CCEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCHHHHH------HHHHHTCC-----------
T ss_pred HHHHHhCCC------CcEEEEECHhHHHHHHHHHhChhh-cceEEEEcCCCccch------hhhhhhhhhhhhhhhhcCC
Confidence 999998643 899999999999999999999999 999999997543110 0000000000000000
Q ss_pred -ccCCccccc------ccccCChHHHHHHhcCCCC---------cCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEee
Q 020633 193 -AAMPDNKMV------GKAIKDPEKLKVIASNPRR---------YTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 193 -~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 256 (323)
......... ................... +.......... .....+.++++|+|+|+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~i~~PvLii~G 277 (330)
T 3p2m_A 205 REFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFA-------GLWDDVDALSAPITLVRG 277 (330)
T ss_dssp CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHH-------HHHHHHHHCCSCEEEEEE
T ss_pred ccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccH-------HHHHHHhhCCCCEEEEEe
Confidence 000000000 0000111111111111100 00000001111 122345678999999999
Q ss_pred CCCcccCchhHHHHHHHcCCCCcc-EEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 257 TADGVTCPTSSKLLYEKASSADKS-IKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|.++|.+.++.+.+.+ ++.+ +++++++||++++++| +++.+.|.+||++
T Consensus 278 ~~D~~v~~~~~~~l~~~~--~~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 278 GSSGFVTDQDTAELHRRA--THFRGVHIVEKSGHSVQSDQP----RALIEIVRGVLDT 329 (330)
T ss_dssp TTCCSSCHHHHHHHHHHC--SSEEEEEEETTCCSCHHHHCH----HHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHhC--CCCeeEEEeCCCCCCcchhCH----HHHHHHHHHHHhc
Confidence 999999999999999998 7788 9999999999996554 4589999999864
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=217.65 Aligned_cols=239 Identities=16% Similarity=0.215 Sum_probs=150.0
Q ss_pred cEEEEEecCCCCCcce-EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKA-TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~-~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 119 (323)
+|+|..+|. ++ +|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+.. ..++++++++++.+.++
T Consensus 3 ~l~~~~~G~-----g~~~vvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~~l~ 73 (258)
T 1m33_A 3 NIWWQTKGQ-----GNVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGF--GALSLADMAEAVLQQAP 73 (258)
T ss_dssp CCCEEEECC-----CSSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTCCSC--CCCCHHHHHHHHHTTSC
T ss_pred ceEEEEecC-----CCCeEEEECCCCCChH-HHHHHHHHhhc-CcEEEEeeCCCCCCCCCC--CCcCHHHHHHHHHHHhC
Confidence 466777764 35 8999999998877 89999999975 699999999999999865 23477777666544332
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc----hhhHHHHHhhhhh----hhhcc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK----PSKLHLFMYGLLF----GLADT 191 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~ 191 (323)
.+++|+||||||.+|+.+|.++|++ |+++|++++......... .......+...+. .....
T Consensus 74 ----------~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (258)
T 1m33_A 74 ----------DKAIWLGWSLGGLVASQIALTHPER-VRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVER 142 (258)
T ss_dssp ----------SSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCeEEEEECHHHHHHHHHHHHhhHh-hceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHH
Confidence 3899999999999999999999998 999999987533211100 0000111100000 00000
Q ss_pred cccCCcccccccccCChHHH---HHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCCcccCchh
Q 020633 192 WAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
+.... ............ ....... ............... +....+.++++|+++|+|++|.++|.+.
T Consensus 143 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~ 214 (258)
T 1m33_A 143 FLALQ---TMGTETARQDARALKKTVLALP-----MPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKV 214 (258)
T ss_dssp HHHTT---STTSTTHHHHHHHHHHHHHTSC-----CCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGG
T ss_pred HHHHH---hcCCccchhhHHHHHHHHHhcc-----CCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHH
Confidence 00000 000000000000 0111110 011111111111111 1234567889999999999999999888
Q ss_pred HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.+.+.+ ++.++++++++||++++++|+ ++.+.|.+|+++
T Consensus 215 ~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 255 (258)
T 1m33_A 215 VPMLDKLW--PHSESYIFAKAAHAPFISHPA----EFCHLLVALKQR 255 (258)
T ss_dssp CC-CTTTC--TTCEEEEETTCCSCHHHHSHH----HHHHHHHHHHTT
T ss_pred HHHHHHhC--ccceEEEeCCCCCCccccCHH----HHHHHHHHHHHh
Confidence 88777777 788999999999999966554 499999999964
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-33 Score=219.19 Aligned_cols=264 Identities=12% Similarity=0.078 Sum_probs=170.0
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---cCCChH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC---YLGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~ 108 (323)
..+...+| +++|..+++ +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|..... ..++++
T Consensus 11 ~~~~~~~g~~l~~~~~g~-----~~~vv~lHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEGT-----GDPILFQHGNPTSSY-LWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERYAYA 83 (302)
T ss_dssp CEEEEETTEEEEEEEESC-----SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHH
T ss_pred ceEEEECCEEEEEEEcCC-----CCEEEEECCCCCchh-hhHHHHHHhccC-CeEEEEcCCCCCCCCCCCCCCcccccHH
Confidence 44556678 999998875 479999999998877 888889889776 8999999999999986532 125899
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC--chh--hHHHHHhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM--KPS--KLHLFMYGL 184 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~--~~~--~~~~~~~~~ 184 (323)
++++|+.++++++.. ..+++|+|||+||.+++.+|.++|++ |+++|+++|........ ... .....+...
T Consensus 84 ~~~~~~~~~l~~l~~-----~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T 1mj5_A 84 EHRDYLDALWEALDL-----GDRVVLVVHDWGSALGFDWARRHRER-VQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQ 157 (302)
T ss_dssp HHHHHHHHHHHHTTC-----TTCEEEEEEHHHHHHHHHHHHHTGGG-EEEEEEEEECCSCBCGGGSCGGGHHHHHHHHST
T ss_pred HHHHHHHHHHHHhCC-----CceEEEEEECCccHHHHHHHHHCHHH-HhheeeecccCCchhhhhhhHHHHHHHHHHhcc
Confidence 999999999999864 14899999999999999999999998 99999999876422110 000 001110000
Q ss_pred h-hhhhcc---cccCCcccccccccCChHHHHHHhcCCCC-cCCCCchh---------HHHHHHHHHHHHHhcCCCCCcC
Q 020633 185 L-FGLADT---WAAMPDNKMVGKAIKDPEKLKVIASNPRR-YTGKPRVG---------TMREIARVCQYIQDNFSKVTVP 250 (323)
Q Consensus 185 ~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~P 250 (323)
. ...... +............................ ........ ....+.....+....+.++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 237 (302)
T 1mj5_A 158 AGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIP 237 (302)
T ss_dssp THHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSC
T ss_pred chhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCC
Confidence 0 000000 00000000000001111111111100000 00000000 0001111222345667889999
Q ss_pred EEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 251 FLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|+|+|++|.++|++..+.+.+.+ ++ +++++ ++||++++++|+ ++.+.|.+|+++....
T Consensus 238 ~l~i~g~~D~~~~~~~~~~~~~~~--~~-~~~~~-~~gH~~~~e~p~----~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 238 KLFINAEPGALTTGRMRDFCRTWP--NQ-TEITV-AGAHFIQEDSPD----EIGAAIAAFVRRLRPA 296 (302)
T ss_dssp EEEEEEEECSSSSHHHHHHHTTCS--SE-EEEEE-EESSCGGGTCHH----HHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCCCCCChHHHHHHHHhc--CC-ceEEe-cCcCcccccCHH----HHHHHHHHHHHhhccc
Confidence 999999999999999888888877 67 99999 999999976654 4999999999877544
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=211.77 Aligned_cols=236 Identities=14% Similarity=0.094 Sum_probs=172.6
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
.+.+.+.. +| +|.++.+.|. ++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|..... ..++.
T Consensus 6 ~~~~~~~~-~g~~l~~~~~~p~---~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~-~~~~~ 79 (290)
T 3ksr_A 6 LSSIEIPV-GQDELSGTLLTPT---GMPGVLFVHGWGGSQH-HSLVRAREAVGLGCICMTFDLRGHEGYASMRQ-SVTRA 79 (290)
T ss_dssp EEEEEEEE-TTEEEEEEEEEEE---SEEEEEEECCTTCCTT-TTHHHHHHHHTTTCEEECCCCTTSGGGGGGTT-TCBHH
T ss_pred eeeEEecC-CCeEEEEEEecCC---CCcEEEEeCCCCCCcC-cHHHHHHHHHHCCCEEEEeecCCCCCCCCCcc-cccHH
Confidence 34555665 66 9999999986 5899999999998877 89999999999999999999999999976533 24789
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.+++|+.++++++.....++..+++|+|||+||.+++.++.++| ++++++++|....................+
T Consensus 80 ~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~---~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~--- 153 (290)
T 3ksr_A 80 QNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP---VEWLALRSPALYKDAHWDQPKVSLNADPDL--- 153 (290)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC---CSEEEEESCCCCCSSCTTSBHHHHHHSTTH---
T ss_pred HHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC---CCEEEEeCcchhhhhhhhcccccccCChhh---
Confidence 99999999999998764333458999999999999999999987 778899888765432211111000000000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
..+......... ......+.++++|+|+++|++|.+++.+..+
T Consensus 154 -----------------------~~~~~~~~~~~~--------------~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~ 196 (290)
T 3ksr_A 154 -----------------------MDYRRRALAPGD--------------NLALAACAQYKGDVLLVEAENDVIVPHPVMR 196 (290)
T ss_dssp -----------------------HHHTTSCCCGGG--------------CHHHHHHHHCCSEEEEEEETTCSSSCHHHHH
T ss_pred -----------------------hhhhhhhhhhcc--------------ccHHHHHHhcCCCeEEEEecCCcccChHHHH
Confidence 000000000000 0012334567899999999999999999999
Q ss_pred HHHHHcCCC-CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 269 LLYEKASSA-DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 269 ~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.+.+... ++++++++++||.+.. +...+.+.+.+.+||++++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 197 NYADAFTNARSLTSRVIAGADHALSV---KEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp HHHHHTTTSSEEEEEEETTCCTTCCS---HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCceEEEcCCCCCCCCc---chHHHHHHHHHHHHHHHHhcC
Confidence 999988432 3569999999998763 445677999999999988753
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=213.71 Aligned_cols=255 Identities=15% Similarity=0.149 Sum_probs=166.8
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHH
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 109 (323)
+..++. .+| +++|..+++ +|+||++||++++.. .|..+++.|++ ||.|+++|+||+|.|.... ...++++
T Consensus 49 ~~~~~~-~~~~~~~~~~~g~-----~p~vv~lhG~~~~~~-~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~-~~~~~~~ 119 (314)
T 3kxp_A 49 ISRRVD-IGRITLNVREKGS-----GPLMLFFHGITSNSA-VFEPLMIRLSD-RFTTIAVDQRGHGLSDKPE-TGYEAND 119 (314)
T ss_dssp EEEEEE-CSSCEEEEEEECC-----SSEEEEECCTTCCGG-GGHHHHHTTTT-TSEEEEECCTTSTTSCCCS-SCCSHHH
T ss_pred ceeeEE-ECCEEEEEEecCC-----CCEEEEECCCCCCHH-HHHHHHHHHHc-CCeEEEEeCCCcCCCCCCC-CCCCHHH
Confidence 334444 456 999988866 579999999998877 89999999987 5999999999999997433 3458999
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+++|+.++++++..+ +++++|||+||.+++.+|.++|++ |+++|++++....... .............
T Consensus 120 ~~~dl~~~l~~l~~~------~v~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~-----~~~~~~~~~~~~~ 187 (314)
T 3kxp_A 120 YADDIAGLIRTLARG------HAILVGHSLGARNSVTAAAKYPDL-VRSVVAIDFTPYIETE-----ALDALEARVNAGS 187 (314)
T ss_dssp HHHHHHHHHHHHTSS------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCTTCCHH-----HHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhCCC------CcEEEEECchHHHHHHHHHhChhh-eeEEEEeCCCCCCCcc-----hhhHHHHHhhhch
Confidence 999999999998743 899999999999999999999988 9999999986533211 0111111000000
Q ss_pred cccccC-Cccccc---ccccCChHHHHHHhcCCCCcCC----CCchhHHHHHHHHHH-HHHhcCCCCCcCEEEEeeCCCc
Q 020633 190 DTWAAM-PDNKMV---GKAIKDPEKLKVIASNPRRYTG----KPRVGTMREIARVCQ-YIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 190 ~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
...... ...... ...................... ............... +....+.++++|+|+++|++|.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~ 267 (314)
T 3kxp_A 188 QLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSK 267 (314)
T ss_dssp SCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCS
T ss_pred hhhcCHHHHHHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCc
Confidence 000000 000000 0000011111111111111000 000000111100000 1233456789999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++|.+.++.+.+.+ +++++++++++||+++.++ .+++.+.|.+||+
T Consensus 268 ~~~~~~~~~~~~~~--~~~~~~~~~g~gH~~~~e~----~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 268 LVSAAALAKTSRLR--PDLPVVVVPGADHYVNEVS----PEITLKAITNFID 313 (314)
T ss_dssp SSCHHHHHHHHHHC--TTSCEEEETTCCSCHHHHC----HHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhC--CCceEEEcCCCCCcchhhC----HHHHHHHHHHHHh
Confidence 99999999999998 7899999999999998544 4559999999986
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=222.90 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=160.2
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC---cccCCChHHHhhcHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI---RCYLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~ 117 (323)
+++|...++. +|+|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|... .....+++++++|+.++
T Consensus 10 ~l~~~~~g~~----~p~vv~~HG~~~~~~-~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dnp_A 10 ALNVRVVGSG----ERVLVLAHGFGTDQS-AWNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHI 83 (269)
T ss_dssp HTTCEEECSC----SSEEEEECCTTCCGG-GGTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHH
T ss_pred HhhhhhcCCC----CCEEEEEeCCCCcHH-HHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHH
Confidence 4556666653 589999999998877 88899999987 899999999999999652 23334789999999999
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc-----hhhHHHHHhhhhhhhhccc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-----PSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 192 (323)
++.+.. .+++++|||+||.+|+.+|.++|++ |+++|++++......... ...........+......+
T Consensus 84 ~~~~~~------~~~~l~GhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (269)
T 4dnp_A 84 LDALGI------DCCAYVGHSVSAMIGILASIRRPEL-FSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAW 156 (269)
T ss_dssp HHHTTC------CSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHH
T ss_pred HHhcCC------CeEEEEccCHHHHHHHHHHHhCcHh-hceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHH
Confidence 998864 3899999999999999999999999 999999998654322110 0001111111100000000
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
.......... .........+...... ............. .+....+.++++|+++++|++|.++|.+.++.+
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 230 (269)
T 4dnp_A 157 VNGFAPLAVG--ADVPAAVREFSRTLFN----MRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYL 230 (269)
T ss_dssp HHHHHHHHHC--SSCHHHHHHHHHHHHH----SCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHH
T ss_pred HHHhhhhhcc--CCChhHHHHHHHHHHc----cCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHH
Confidence 0000000000 0000000000000000 0000111111111 012345678899999999999999999999999
Q ss_pred HHHcCCCC-ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 271 YEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 271 ~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+ ++ +++++++++||+.++++| +++.+.|.+||+++
T Consensus 231 ~~~~--~~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 231 KNHL--GGKNTVHWLNIEGHLPHLSAP----TLLAQELRRALSHR 269 (269)
T ss_dssp HHHS--SSCEEEEEEEEESSCHHHHCH----HHHHHHHHHHHC--
T ss_pred HHhC--CCCceEEEeCCCCCCccccCH----HHHHHHHHHHHhhC
Confidence 9998 55 799999999999996555 44899999998753
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-31 Score=215.62 Aligned_cols=261 Identities=14% Similarity=0.189 Sum_probs=165.9
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccc------------cHHHHHH---HHhhCCcEEEEecCCC--CcCCCCC
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW------------MFQKICI---SFATWGYAVFAADLLG--HGRSDGI 100 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G--~G~s~~~ 100 (323)
+| +++|..+++.+...+|+|||+||++++... .|..++. .|.+.||+|+++|+|| +|.|...
T Consensus 29 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~ 108 (366)
T 2pl5_A 29 SPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 108 (366)
T ss_dssp SSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred cCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCC
Confidence 56 899999998643346899999999987652 4666653 4556789999999999 8988643
Q ss_pred ccc------------CCChHHHhhcHHHHHHHHHhcCCCCCCCe-EEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 101 RCY------------LGDMEKVAASSLSFFKHVRDSEPYRDLPG-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 101 ~~~------------~~~~~~~~~d~~~~l~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
... .++++++++|+.++++++..+ ++ +|+||||||.+|+.+|.++|++ |+++|++++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~------~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 181 (366)
T 2pl5_A 109 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE------KLFCVAGGSMGGMQALEWSIAYPNS-LSNCIVMASTAE 181 (366)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS------SEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSB
T ss_pred CCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCc------eEEEEEEeCccHHHHHHHHHhCcHh-hhheeEeccCcc
Confidence 210 258999999999999988643 78 8999999999999999999998 999999998765
Q ss_pred CCCCCchhhHHHHHhhhhhhhhcccccC------Cccc-----ccc--cccCChHHHHHHhcCC----------------
Q 020633 168 IPENMKPSKLHLFMYGLLFGLADTWAAM------PDNK-----MVG--KAIKDPEKLKVIASNP---------------- 218 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-----~~~--~~~~~~~~~~~~~~~~---------------- 218 (323)
...... .........+... +.+... .... ... ...........+....
T Consensus 182 ~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (366)
T 2pl5_A 182 HSAMQI--AFNEVGRQAILSD-PNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYL 258 (366)
T ss_dssp CCHHHH--HHHHHHHHHHHTS-TTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGG
T ss_pred CCCccc--hhhHHHHHHHHhC-cccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHH
Confidence 431100 0000000000000 000000 0000 000 0000001111111000
Q ss_pred ----CCcCCCCchhHHHHHHHHHH--------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC--CccEEEe
Q 020633 219 ----RRYTGKPRVGTMREIARVCQ--------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA--DKSIKIY 284 (323)
Q Consensus 219 ----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~ 284 (323)
.................... +....+.++++|+|+|+|++|.++|++.++.+.+.+... +++++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (366)
T 2pl5_A 259 IYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVEL 338 (366)
T ss_dssp GSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEe
Confidence 00011111112222222111 123467889999999999999999999999999988311 7899999
Q ss_pred -cCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 285 -DGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 285 -~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++||++++++|++ +.+.|.+||++
T Consensus 339 ~~~~gH~~~~e~p~~----~~~~i~~fl~~ 364 (366)
T 2pl5_A 339 QSGEGHDSFLLKNPK----QIEILKGFLEN 364 (366)
T ss_dssp CCCBSSGGGGSCCHH----HHHHHHHHHHC
T ss_pred CCCCCcchhhcChhH----HHHHHHHHHcc
Confidence 89999999877765 88999999864
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-30 Score=194.26 Aligned_cols=200 Identities=16% Similarity=0.135 Sum_probs=160.1
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---CC-ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
+..++..+.+.+|+|.++.+.|.+.+++|+||++||++ +. ....|..+++.|+++||.|+++|+||+|.|.....
T Consensus 4 ~~~~~~~~~~~~g~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~- 82 (208)
T 3trd_A 4 MTNEDFLIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYD- 82 (208)
T ss_dssp CSSSCEEEECSSSEEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-
T ss_pred cccceEEEECCCceEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCcc-
Confidence 34577888888889999999987645789999999942 22 22267889999999999999999999999976532
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
......+|+.++++++....+ ..+++++|||+||.+++.++ .+| + ++++|+++|.....
T Consensus 83 --~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a-~~~-~-v~~~v~~~~~~~~~-------------- 141 (208)
T 3trd_A 83 --NGVGEVEDLKAVLRWVEHHWS--QDDIWLAGFSFGAYISAKVA-YDQ-K-VAQLISVAPPVFYE-------------- 141 (208)
T ss_dssp --TTTHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHH-HHS-C-CSEEEEESCCTTSG--------------
T ss_pred --chHHHHHHHHHHHHHHHHhCC--CCeEEEEEeCHHHHHHHHHh-ccC-C-ccEEEEeccccccC--------------
Confidence 345667899999999987643 56899999999999999999 777 5 99999999875100
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
....+..+++|+++++|++|.++|
T Consensus 142 --------------------------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~ 165 (208)
T 3trd_A 142 --------------------------------------------------------GFASLTQMASPWLIVQGDQDEVVP 165 (208)
T ss_dssp --------------------------------------------------------GGTTCCSCCSCEEEEEETTCSSSC
T ss_pred --------------------------------------------------------CchhhhhcCCCEEEEECCCCCCCC
Confidence 012344568999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
.+.++.+.+.+.. ++++++++++||.+.. + .+++.+.|.+||
T Consensus 166 ~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~----~-~~~~~~~i~~fl 207 (208)
T 3trd_A 166 FEQVKAFVNQISS-PVEFVVMSGASHFFHG----R-LIELRELLVRNL 207 (208)
T ss_dssp HHHHHHHHHHSSS-CCEEEEETTCCSSCTT----C-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHccC-ceEEEEeCCCCCcccc----c-HHHHHHHHHHHh
Confidence 9999999998842 3899999999999883 2 256888888887
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-31 Score=197.28 Aligned_cols=199 Identities=21% Similarity=0.350 Sum_probs=162.0
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH--HHHHHhhCCcEEEEecCCCCcCC---CCCc
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK--ICISFATWGYAVFAADLLGHGRS---DGIR 101 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s---~~~~ 101 (323)
+..++.++.. +| +|+++.|.+.+ ++|+||++||++++.. .|.. +++.|+++||.|+++|+||+|.| ....
T Consensus 2 m~~~~~~~~~-~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~ 77 (207)
T 3bdi_A 2 MALQEEFIDV-NGTRVFQRKMVTDS--NRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYG 77 (207)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCTT--CCEEEEEECCTTCCGG-GGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTC
T ss_pred CcceeEEEee-CCcEEEEEEEeccC--CCCeEEEECCCCCCcc-ccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCC
Confidence 3344555554 67 99988887764 5789999999998877 7888 99999999999999999999999 5543
Q ss_pred ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
....+.+++++++..+++.+. ..+++++|||+||.+++.++.++|++ ++++++++|..... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~------~----- 139 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKANG------VARSVIMGASMGGGMVIMTTLQYPDI-VDGIIAVAPAWVES------L----- 139 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCGG------G-----
T ss_pred CCcchHHHHHHHHHHHHHHcC------CCceEEEEECccHHHHHHHHHhCchh-heEEEEeCCccccc------h-----
Confidence 332278888899998888775 34899999999999999999999988 99999999863210 0
Q ss_pred hhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
...+.++++|+++++|++|..
T Consensus 140 -----------------------------------------------------------~~~~~~~~~p~l~i~g~~D~~ 160 (207)
T 3bdi_A 140 -----------------------------------------------------------KGDMKKIRQKTLLVWGSKDHV 160 (207)
T ss_dssp -----------------------------------------------------------HHHHTTCCSCEEEEEETTCTT
T ss_pred -----------------------------------------------------------hHHHhhccCCEEEEEECCCCc
Confidence 122356789999999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.+..+.+.+.+ ++.++++++++||..+.+. .+++.+.|.+||++
T Consensus 161 ~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~----~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 161 VPIALSKEYASII--SGSRLEIVEGSGHPVYIEK----PEEFVRITVDFLRN 206 (207)
T ss_dssp TTHHHHHHHHHHS--TTCEEEEETTCCSCHHHHS----HHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHhc--CCceEEEeCCCCCCccccC----HHHHHHHHHHHHhh
Confidence 9999999999988 7889999999999988543 45588999999864
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=205.18 Aligned_cols=198 Identities=19% Similarity=0.263 Sum_probs=159.9
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH--HHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK--ICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+.++.++.. +| +++|..++|.+++++|+||++||++++.. .|.. +++.|+++||.|+++|+||+|.|..... ..
T Consensus 6 ~~~~~~~~~-~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-~~ 82 (210)
T 1imj_A 6 EQREGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAA-PA 82 (210)
T ss_dssp EECCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCC-SS
T ss_pred ccccceEee-CCeEEEEEEeCCCCCCCCceEEEECCCCCccc-eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCC-cc
Confidence 334455554 67 99999998876467899999999998877 7877 5899999999999999999999986552 23
Q ss_pred ChHHHh--hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 106 DMEKVA--ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 106 ~~~~~~--~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
+++... +++..+++.+.. .+++++|||+||.+++.++..+|++ ++++|+++|......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~------------- 142 (210)
T 1imj_A 83 PIGELAPGSFLAAVVDALEL------GPPVVISPSLSGMYSLPFLTAPGSQ-LPGFVPVAPICTDKI------------- 142 (210)
T ss_dssp CTTSCCCTHHHHHHHHHHTC------CSCEEEEEGGGHHHHHHHHTSTTCC-CSEEEEESCSCGGGS-------------
T ss_pred hhhhcchHHHHHHHHHHhCC------CCeEEEEECchHHHHHHHHHhCccc-cceEEEeCCCccccc-------------
Confidence 566666 888888888763 3899999999999999999999998 999999998643100
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
....+.++++|+++++|++|. ++
T Consensus 143 --------------------------------------------------------~~~~~~~~~~p~l~i~g~~D~-~~ 165 (210)
T 1imj_A 143 --------------------------------------------------------NAANYASVKTPALIVYGDQDP-MG 165 (210)
T ss_dssp --------------------------------------------------------CHHHHHTCCSCEEEEEETTCH-HH
T ss_pred --------------------------------------------------------cchhhhhCCCCEEEEEcCccc-CC
Confidence 012234678999999999999 99
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+..+.+ +.+ ++.++++++++||..+.++ .+++.+.|.+||++
T Consensus 166 ~~~~~~~-~~~--~~~~~~~~~~~~H~~~~~~----~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 166 QTSFEHL-KQL--PNHRVLIMKGAGHPCYLDK----PEEWHTGLLDFLQG 208 (210)
T ss_dssp HHHHHHH-TTS--SSEEEEEETTCCTTHHHHC----HHHHHHHHHHHHHT
T ss_pred HHHHHHH-hhC--CCCCEEEecCCCcchhhcC----HHHHHHHHHHHHHh
Confidence 9888888 766 6789999999999988544 45588999999875
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-31 Score=211.45 Aligned_cols=263 Identities=13% Similarity=0.062 Sum_probs=159.3
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChH
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~ 108 (323)
+..++...+| +++|..+++++ +++|||+||++++.. .+ .+...+...+|+|+++|+||||.|+.... ..++++
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~---g~~vvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 89 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPN---GKPAVFIHGGPGGGI-SP-HHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTW 89 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTT---SEEEEEECCTTTCCC-CG-GGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHH
T ss_pred eeeEEEcCCCcEEEEEEcCCCC---CCcEEEECCCCCccc-ch-hhhhhccccCCeEEEECCCCCCCCCCCcccccccHH
Confidence 4556777788 99999988643 578999999876543 11 12233445689999999999999975432 235789
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH-HHh----h
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL-FMY----G 183 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~-~~~----~ 183 (323)
++++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+... ... .
T Consensus 90 ~~~~dl~~l~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~ 160 (317)
T 1wm1_A 90 HLVADIERLREMAGVE------QWLVFGGSWGSTLALAYAQTHPER-VSEMVLRGIFTLRKQR--LHWYYQDGASRFFPE 160 (317)
T ss_dssp HHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHH--HHHHHTSSGGGTSHH
T ss_pred HHHHHHHHHHHHcCCC------cEEEEEeCHHHHHHHHHHHHCChh-eeeeeEeccCCCchhh--hhHHhhccchhhcHH
Confidence 9999999999988744 899999999999999999999999 9999999875421100 000000 000 0
Q ss_pred hhhhhhcccccCCc----cccccccc-CChHHH-------HHHhcCCCCcCCCCc------hhHHHHHHHHH--------
Q 020633 184 LLFGLADTWAAMPD----NKMVGKAI-KDPEKL-------KVIASNPRRYTGKPR------VGTMREIARVC-------- 237 (323)
Q Consensus 184 ~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~~-------- 237 (323)
....+......... ..+..... .+.... ............... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (317)
T 1wm1_A 161 KWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLG 240 (317)
T ss_dssp HHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhccc
Confidence 00000000000000 00000000 011000 000001000000000 00000000000
Q ss_pred ----HH-HHhcCCCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 238 ----QY-IQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 238 ----~~-~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
.. ....+.+++ +|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++. ++..+++.+.|.+|+
T Consensus 241 ~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~--p~~~~~~i~~~gH~~~~---~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 241 FLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW--PEAELHIVEGAGHSYDE---PGILHQLMIATDRFA 315 (317)
T ss_dssp GCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTTS---HHHHHHHHHHHHHHT
T ss_pred ccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC--CCceEEEECCCCCCCCC---cchHHHHHHHHHHHh
Confidence 00 234456774 99999999999999999999999998 78999999999998751 235677888888887
Q ss_pred H
Q 020633 312 D 312 (323)
Q Consensus 312 ~ 312 (323)
.
T Consensus 316 ~ 316 (317)
T 1wm1_A 316 G 316 (317)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=216.90 Aligned_cols=251 Identities=9% Similarity=0.024 Sum_probs=156.2
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH-----HHHHHhhCCcEEEEecCCCCcCCCCCcccC---CChH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-----ICISFATWGYAVFAADLLGHGRSDGIRCYL---GDME 108 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~~~~ 108 (323)
.+| +|+|..+++++ ..+|+|||+||++++....|.. +++.|++ +|+|+++|+||||.|....... ++++
T Consensus 18 ~~~~~l~y~~~G~~~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 95 (286)
T 2qmq_A 18 TPYGSVTFTVYGTPK-PKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLGYQYPSLD 95 (286)
T ss_dssp ETTEEEEEEEESCCC-TTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTTCCCCCHH
T ss_pred cCCeEEEEEeccCCC-CCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCCCCccCHH
Confidence 356 99999998753 3478999999999886523554 7788876 5999999999999886432222 3899
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
++++|+.++++++..+ +++|+|||+||.+++.+|.++|++ |+++|++++....... ...............
T Consensus 96 ~~~~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~ 166 (286)
T 2qmq_A 96 QLADMIPCILQYLNFS------TIIGVGVGAGAYILSRYALNHPDT-VEGLVLINIDPNAKGW--MDWAAHKLTGLTSSI 166 (286)
T ss_dssp HHHHTHHHHHHHHTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCCCH--HHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHhCCC------cEEEEEEChHHHHHHHHHHhChhh-eeeEEEECCCCcccch--hhhhhhhhccccccc
Confidence 9999999999998643 899999999999999999999998 9999999986543211 111000000000000
Q ss_pred hcccccCCcccccccc--cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH---H---HhcCCCCCcCEEEEeeCCCc
Q 020633 189 ADTWAAMPDNKMVGKA--IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY---I---QDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~P~l~i~g~~D~ 260 (323)
..... ..+.... .........+..... ..........+...... . ...+.++++|+|+|+|++|.
T Consensus 167 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 239 (286)
T 2qmq_A 167 PDMIL----GHLFSQEELSGNSELIQKYRGIIQ---HAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAP 239 (286)
T ss_dssp HHHHH----HHHSCHHHHHTTCHHHHHHHHHHH---TCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTST
T ss_pred hHHHH----HHHhcCCCCCcchHHHHHHHHHHH---hcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCc
Confidence 00000 0000000 000000111000000 00000011111111110 0 13456789999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
++| ...+.+.+.. .+++++++++++||++++++| +++.+.|.+||+
T Consensus 240 ~~~-~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 285 (286)
T 2qmq_A 240 HED-AVVECNSKLD-PTQTSFLKMADSGGQPQLTQP----GKLTEAFKYFLQ 285 (286)
T ss_dssp THH-HHHHHHHHSC-GGGEEEEEETTCTTCHHHHCH----HHHHHHHHHHHC
T ss_pred ccc-HHHHHHHHhc-CCCceEEEeCCCCCcccccCh----HHHHHHHHHHhc
Confidence 998 4444444444 127899999999999996554 458899999984
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-31 Score=201.54 Aligned_cols=208 Identities=16% Similarity=0.126 Sum_probs=165.6
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc--
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCY-- 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-- 103 (323)
+..+...+.. +| ++.++.+.|.+ ++|+||++||++++.. +.+..+++.|+++||.|+++|+||+|.|......
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~--~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~ 86 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG--ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRH 86 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT--CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCS
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC--CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhc
Confidence 4456677776 77 99999998874 5899999999997765 2456788999999999999999999988643211
Q ss_pred -CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 104 -LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 104 -~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
..+++++++|+.++++++......+..+++++|||+||.+++.++..+|++ ++++|++++.....
T Consensus 87 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~------------- 152 (223)
T 2o2g_A 87 LRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPET-VQAVVSRGGRPDLA------------- 152 (223)
T ss_dssp STTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCGGGC-------------
T ss_pred ccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCc-eEEEEEeCCCCCcC-------------
Confidence 248899999999999999987665667999999999999999999999998 99999999753210
Q ss_pred hhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
...+.++++|+++++|++|.++
T Consensus 153 ----------------------------------------------------------~~~~~~~~~P~l~i~g~~D~~~ 174 (223)
T 2o2g_A 153 ----------------------------------------------------------PSALPHVKAPTLLIVGGYDLPV 174 (223)
T ss_dssp ----------------------------------------------------------TTTGGGCCSCEEEEEETTCHHH
T ss_pred ----------------------------------------------------------HHHHhcCCCCEEEEEccccCCC
Confidence 1234567899999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|.+..+.+.+.. ++.++++++++||.+.. .+..+++.+.+.+||++++
T Consensus 175 ~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 175 IAMNEDALEQLQ--TSKRLVIIPRASHLFEE---PGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp HHHHHHHHHHCC--SSEEEEEETTCCTTCCS---TTHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHhhC--CCeEEEEeCCCCcccCC---hHHHHHHHHHHHHHHHHhc
Confidence 855544444432 67899999999998652 2456779999999999875
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.9e-31 Score=209.62 Aligned_cols=261 Identities=14% Similarity=0.076 Sum_probs=156.0
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-cCCChH
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-YLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~ 108 (323)
+..++...+| +++|..+++++ +++|||+||++++.. . ..+...+...||+|+++|+||||.|+.... ..++++
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~---g~pvvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 86 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPH---GKPVVMLHGGPGGGC-N-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTW 86 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTT---SEEEEEECSTTTTCC-C-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHH
T ss_pred ccceEEcCCCCEEEEEecCCCC---CCeEEEECCCCCccc-c-HHHHHhcCcCcceEEEECCCCCcCCCCCcccccccHH
Confidence 4566777788 99999988643 578999999876543 1 122334445689999999999999975432 235789
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH----HHH-hh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH----LFM-YG 183 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~----~~~-~~ 183 (323)
++++|+.+++++++.+ +++|+||||||.+|+.+|.++|++ |+++|++++....... ..+.. ... ..
T Consensus 87 ~~~~dl~~l~~~l~~~------~~~lvGhSmGg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~ 157 (313)
T 1azw_A 87 DLVADIERLRTHLGVD------RWQVFGGSWGSTLALAYAQTHPQQ-VTELVLRGIFLLRRFE--LEWFYQEGASRLFPD 157 (313)
T ss_dssp HHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHH--HHHHHTSSHHHHCHH
T ss_pred HHHHHHHHHHHHhCCC------ceEEEEECHHHHHHHHHHHhChhh-eeEEEEeccccCchhh--hHHHHhhhhhhhchH
Confidence 9999999999998754 899999999999999999999999 9999999875421100 00000 000 00
Q ss_pred hhhhhhcccccCCccc----cccccc-CChHHHH-------HHhcCCCCcCCCCc-------hhHHHHHHHH--------
Q 020633 184 LLFGLADTWAAMPDNK----MVGKAI-KDPEKLK-------VIASNPRRYTGKPR-------VGTMREIARV-------- 236 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~~~-------- 236 (323)
....+........... +..... .+..... .............. ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
T 1azw_A 158 AWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNG 237 (313)
T ss_dssp HHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHhhccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhccc
Confidence 0000000000000000 000000 0100000 00000000000000 0000000000
Q ss_pred -----HHHHHhcCCCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHH
Q 020633 237 -----CQYIQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 237 -----~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.......+.+++ +|+|+|+|++|.++|++.++.+.+.+ +++++++++++||.++ .++..+++.+.|.+|
T Consensus 238 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~---~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 238 GFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW--PKAQLQISPASGHSAF---EPENVDALVRATDGF 312 (313)
T ss_dssp GGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTT---SHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhC--CCcEEEEeCCCCCCcC---CCccHHHHHHHHhhc
Confidence 011234456675 99999999999999999999999998 7899999999999875 133455566666665
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=213.94 Aligned_cols=240 Identities=18% Similarity=0.218 Sum_probs=143.2
Q ss_pred EecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC
Q 020633 46 SFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE 125 (323)
Q Consensus 46 ~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 125 (323)
.+++.+ ..+|+|||+||++++.. .|..+++.|++.||+|+++|+||||.|+.... .+++++++|+.++++.+..+
T Consensus 8 ~~g~~~-~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~--~~~~~~a~~l~~~l~~l~~~- 82 (264)
T 1r3d_A 8 HFAKPT-ARTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHC--DNFAEAVEMIEQTVQAHVTS- 82 (264)
T ss_dssp ESSCCB-TTBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC---------CHHHHHHHHHHHTTCCT-
T ss_pred ccCCCC-CCCCcEEEEcCCCCCHH-HHHHHHHHhcccCceEEEecCCCCCCCCCCCc--cCHHHHHHHHHHHHHHhCcC-
Confidence 344433 23489999999998887 89999999985789999999999999976432 47889999999999887643
Q ss_pred CCCCCCeEEEEechhHHHHHH---HhhhcCCCceeEEEEccCcccCCCCCchhhHHHH---Hhhh-----hhhhhccccc
Q 020633 126 PYRDLPGFLFGESMGGAATML---MYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF---MYGL-----LFGLADTWAA 194 (323)
Q Consensus 126 ~~~~~~~~l~G~S~Gg~~a~~---~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~ 194 (323)
..+++|+||||||.+++. +|.++|++ |+++|++++................ .... .......+..
T Consensus 83 ---~~p~~lvGhSmGG~va~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
T 1r3d_A 83 ---EVPVILVGYSLGGRLIMHGLAQGAFSRLN-LRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ 158 (264)
T ss_dssp ---TSEEEEEEETHHHHHHHHHHHHTTTTTSE-EEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT
T ss_pred ---CCceEEEEECHhHHHHHHHHHHHhhCccc-cceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhh
Confidence 113999999999999999 88899998 9999999875433211000000000 0000 0000000000
Q ss_pred CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-----HHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 195 MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC-----QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
...... ............... ............. ......+.++++|+|+|+|++|..++ .
T Consensus 159 ---~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~ 224 (264)
T 1r3d_A 159 ---QAVFSS-LNHEQRQTLIAQRSA-----NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----Q 224 (264)
T ss_dssp ---SGGGTT-CCHHHHHHHHHHHTT-----SCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----H
T ss_pred ---hhhhhc-cCHHHHHHHHHHHhh-----cchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----H
Confidence 000000 000011111110000 0000111111100 01123456789999999999998642 3
Q ss_pred HHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+ . .++++++++||++++++|++ +.+.|.+|+++..
T Consensus 225 ~~~~~--~-~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 225 LAESS--G-LSYSQVAQAGHNVHHEQPQA----FAKIVQAMIHSII 263 (264)
T ss_dssp HHHHH--C-SEEEEETTCCSCHHHHCHHH----HHHHHHHHHHHHC
T ss_pred HHHHh--C-CcEEEcCCCCCchhhcCHHH----HHHHHHHHHHHhc
Confidence 34444 2 67999999999999766654 9999999998653
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.3e-33 Score=217.92 Aligned_cols=251 Identities=14% Similarity=0.157 Sum_probs=162.6
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---cCCChHHHhhcHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC---YLGDMEKVAASSLSF 117 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~d~~~~ 117 (323)
+++|...++. +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|..... ...+++++++|+.++
T Consensus 18 ~~~~~~~g~~----~~~vv~lHG~~~~~~-~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 91 (282)
T 3qvm_A 18 RNNINITGGG----EKTVLLAHGFGCDQN-MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEI 91 (282)
T ss_dssp HTTCEEEECS----SCEEEEECCTTCCGG-GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHH
T ss_pred hcceeecCCC----CCeEEEECCCCCCcc-hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHH
Confidence 3445555543 489999999998887 88899999987 89999999999999986542 223789999999999
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc------hhhHHHHHhhhhhhhhcc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK------PSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 191 (323)
++++.. .+++++|||+||.+++.++.++|++ |+++|+++|......... ..................
T Consensus 92 ~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T 3qvm_A 92 LVALDL------VNVSIIGHSVSSIIAGIASTHVGDR-ISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIG 164 (282)
T ss_dssp HHHTTC------CSEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHH
T ss_pred HHHcCC------CceEEEEecccHHHHHHHHHhCchh-hheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhh
Confidence 999864 4899999999999999999999998 999999998764332110 000011111111000000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
+........... .........+...... ........+.... .+....+.++++|+++++|++|.++|.+..+.
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 239 (282)
T 3qvm_A 165 WANYLAPLVMGA-SHSSELIGELSGSFCT----TDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQY 239 (282)
T ss_dssp HHHHHHHHHHCT-TSCHHHHHHHHHHHHH----SCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHH
T ss_pred HHHHHHhhccCC-ccchhhHHHHHHHHhc----CCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHH
Confidence 000000000000 0011110000000000 0000111111110 01224567889999999999999999999999
Q ss_pred HHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 270 LYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+.+.+ ++.++++++++||++++++ .+++.+.|.+||+++.
T Consensus 240 ~~~~~--~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 240 MAENI--PNSQLELIQAEGHCLHMTD----AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHHS--SSEEEEEEEEESSCHHHHC----HHHHHHHHHHHHHHC-
T ss_pred HHHhC--CCCcEEEecCCCCcccccC----HHHHHHHHHHHHHhcC
Confidence 99998 7889999999999999654 4559999999998764
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=199.77 Aligned_cols=211 Identities=15% Similarity=0.082 Sum_probs=169.4
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc-------
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC------- 102 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------- 102 (323)
+++.+.+.+| ++.++.+.|.+ +++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|.....
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~-~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 81 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK-APAPVIVIAQDIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQR 81 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS-CSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHH
T ss_pred ceEEEecCCCCeEEEEEECCCC-CCCCEEEEEcCCCCCCH-HHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhh
Confidence 4567788899 89999999875 67899999999998877 88999999999999999999999998864211
Q ss_pred -------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 103 -------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 103 -------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
...+.+..++|+.++++++......+ .+++++|||+||.+++.++..+| +++++++.|....
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~---~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 82 EQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY---VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC---SSEEEEESCSSGG-------
T ss_pred hhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC---ccEEEEecCcccc-------
Confidence 12366778899999999998654221 48999999999999999999987 7888887763210
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEe
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
.....+.++++|+++++
T Consensus 151 ---------------------------------------------------------------~~~~~~~~~~~P~l~i~ 167 (236)
T 1zi8_A 151 ---------------------------------------------------------------KQLNKVPEVKHPALFHM 167 (236)
T ss_dssp ---------------------------------------------------------------GCGGGGGGCCSCEEEEE
T ss_pred ---------------------------------------------------------------cchhhhhhcCCCEEEEe
Confidence 01234566789999999
Q ss_pred eCCCcccCchhHHHHHHHcCC-CCccEEEecCCCcccccCCCc----hhHHHHHHHHHHHHHHHHhh
Q 020633 256 GTADGVTCPTSSKLLYEKASS-ADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++|.+++.+.++.+.+.+.. +++++++++++||.+..+.+. +..+++.+.+.+||+++++.
T Consensus 168 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 168 GGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp ETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred cCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999888843 478999999999988855443 23567899999999988753
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-32 Score=225.11 Aligned_cols=261 Identities=12% Similarity=0.114 Sum_probs=163.4
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCcccc---HHHHHH---HHhhCCcEEEEecCCC--CcCCCCCc-----c--
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWM---FQKICI---SFATWGYAVFAADLLG--HGRSDGIR-----C-- 102 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~---~~~~~~---~l~~~g~~v~~~d~~G--~G~s~~~~-----~-- 102 (323)
+| +|+|..+++.++..+++|||+||++++.. . |..++. .|...||+|+++|+|| +|.|.... .
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~-~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~ 170 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAH-VTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQ 170 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSC-GGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccc-hhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccc
Confidence 45 68999998865344689999999998876 5 777664 4656789999999999 68885311 0
Q ss_pred -------cCCChHHHhhcHHHHHHHHHhcCCCCCCC-eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 103 -------YLGDMEKVAASSLSFFKHVRDSEPYRDLP-GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 103 -------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
..++++++++|+.++++++..+ + ++|+||||||.+|+.+|.++|++ |+++|++++........ .
T Consensus 171 ~~~~~~f~~~t~~~~a~dl~~ll~~l~~~------~~~~lvGhSmGG~ial~~A~~~p~~-v~~lVli~~~~~~~~~~-~ 242 (444)
T 2vat_A 171 RPYGAKFPRTTIRDDVRIHRQVLDRLGVR------QIAAVVGASMGGMHTLEWAFFGPEY-VRKIVPIATSCRQSGWC-A 242 (444)
T ss_dssp CBCGGGCCCCCHHHHHHHHHHHHHHHTCC------CEEEEEEETHHHHHHHHHGGGCTTT-BCCEEEESCCSBCCHHH-H
T ss_pred cccccccccccHHHHHHHHHHHHHhcCCc------cceEEEEECHHHHHHHHHHHhChHh-hheEEEEeccccCCccc-h
Confidence 0258999999999999999754 7 89999999999999999999998 99999999876532110 0
Q ss_pred hhHHHHHhhhhh---hhhccc--------------------ccCCc----cccccccc----------------------
Q 020633 175 SKLHLFMYGLLF---GLADTW--------------------AAMPD----NKMVGKAI---------------------- 205 (323)
Q Consensus 175 ~~~~~~~~~~~~---~~~~~~--------------------~~~~~----~~~~~~~~---------------------- 205 (323)
.+ .......+. .+.... ..... ..+.....
T Consensus 243 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (444)
T 2vat_A 243 AW-FETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSG 321 (444)
T ss_dssp HH-HHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC--------------------
T ss_pred hH-HHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCcccccccccccccccccccccccc
Confidence 00 000000000 000000 00000 00000000
Q ss_pred ------CC-hHHHHHHhcCCCCcCCCCchhHHHHHHHHHH----------HHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 206 ------KD-PEKLKVIASNPRRYTGKPRVGTMREIARVCQ----------YIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 206 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
.. .............+................. +....+.++++|+|+|+|++|.+++.+.++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~ 401 (444)
T 2vat_A 322 NSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHV 401 (444)
T ss_dssp -------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHH
T ss_pred ccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHH
Confidence 00 0000000000000000000011111111111 034456789999999999999999999999
Q ss_pred HHHHHcCCCCccEEEec-CCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 269 LLYEKASSADKSIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 269 ~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+.+ +++++++++ ++||+.++++| +++.+.|.+||++++
T Consensus 402 ~l~~~~--p~~~~~~i~~~~GH~~~~e~p----~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 402 EMGRSI--PNSRLCVVDTNEGHDFFVMEA----DKVNDAVRGFLDQSL 443 (444)
T ss_dssp HHHHHS--TTEEEEECCCSCGGGHHHHTH----HHHHHHHHHHHTC--
T ss_pred HHHHHC--CCcEEEEeCCCCCcchHHhCH----HHHHHHHHHHHHHhc
Confidence 999998 789999999 89999996544 559999999997654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=200.82 Aligned_cols=254 Identities=13% Similarity=0.107 Sum_probs=167.0
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
..+..+.+.|| ++++..+.|.+.+++|+||++||++ ++....+..+.+.|++. |.|+++|+||+|.+
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~-------- 73 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEV-------- 73 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTS--------
T ss_pred ceEEEEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcc--------
Confidence 34567788899 9999999987655789999999988 54443345788888887 99999999999865
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh--HHHHHhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK--LHLFMYG 183 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~--~~~~~~~ 183 (323)
+.....+|+.++++++....+ ..+++|+||||||.+++.++.+ ++ ++++|+++|............ .......
T Consensus 74 ~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~--~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T 3h04_A 74 SLDCIIEDVYASFDAIQSQYS--NCPIFTFGRSSGAYLSLLIARD--RD-IDGVIDFYGYSRINTEPFKTTNSYYAKIAQ 148 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHTTT--TSCEEEEEETHHHHHHHHHHHH--SC-CSEEEEESCCSCSCSHHHHSCCHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHHhhCC--CCCEEEEEecHHHHHHHHHhcc--CC-ccEEEeccccccccccccccccchhhcccc
Confidence 456677888888888877643 6699999999999999999998 55 999999998876532110000 0000000
Q ss_pred -hhhhhhcccccCCcccccccccCChHHHH-H----------HhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCE
Q 020633 184 -LLFGLADTWAAMPDNKMVGKAIKDPEKLK-V----------IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 184 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
........... ................ . +........ ... .....+.++. |+
T Consensus 149 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~-P~ 212 (275)
T 3h04_A 149 SINETMIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDS---KYN----------IAPDELKTLP-PV 212 (275)
T ss_dssp TSCHHHHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSG---GGS----------CCHHHHTTCC-CE
T ss_pred cchHHHHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhcccccccc---ccc----------cccchhccCC-CE
Confidence 00000000000 0000000000000000 0 000000000 000 0011235566 99
Q ss_pred EEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|+++|++|.++|.+.++.+.+.+ ++.++++++++||.++.+.+.+ .+++.+.+.+||++++.
T Consensus 213 lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~~~~~~-~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVPVEESEHIMNHV--PHSTFERVNKNEHDFDRRPNDE-AITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSCTHHHHHHHTTC--SSEEEEEECSSCSCTTSSCCHH-HHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCChHHHHHHHHhc--CCceEEEeCCCCCCcccCCchh-HHHHHHHHHHHHHHHhc
Confidence 99999999999999999999888 6788999999999999776642 36799999999998864
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=205.10 Aligned_cols=238 Identities=17% Similarity=0.179 Sum_probs=159.0
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+|+|..++++ +++|+||++||++++.. .|. +...|. +||+|+++|+||+|.|+... ..+++++++|+.++++.
T Consensus 4 ~l~y~~~g~~--~~~~~vv~~hG~~~~~~-~~~-~~~~l~-~g~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~ 76 (245)
T 3e0x_A 4 MLHYVHVGNK--KSPNTLLFVHGSGCNLK-IFG-ELEKYL-EDYNCILLDLKGHGESKGQC--PSTVYGYIDNVANFITN 76 (245)
T ss_dssp CCCEEEEECT--TCSCEEEEECCTTCCGG-GGT-TGGGGC-TTSEEEEECCTTSTTCCSCC--CSSHHHHHHHHHHHHHH
T ss_pred eeEEEecCCC--CCCCEEEEEeCCcccHH-HHH-HHHHHH-hCCEEEEecCCCCCCCCCCC--CcCHHHHHHHHHHHHHh
Confidence 7888888875 35789999999998877 777 777776 78999999999999998433 34899999999999943
Q ss_pred HHhcCCCCCCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh-hhhcccccCCcc
Q 020633 121 VRDSEPYRDLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF-GLADTWAAMPDN 198 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (323)
....... . +++++|||+||.+++.++.+ +|+ |+++|+++|.......... ....+..... ......
T Consensus 77 ~~~~~~~-~-~~~l~G~S~Gg~~a~~~a~~~~p~--v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------ 144 (245)
T 3e0x_A 77 SEVTKHQ-K-NITLIGYSMGGAIVLGVALKKLPN--VRKVVSLSGGARFDKLDKD--FMEKIYHNQLDNNYLLE------ 144 (245)
T ss_dssp CTTTTTC-S-CEEEEEETHHHHHHHHHHTTTCTT--EEEEEEESCCSBCTTSCHH--HHHHHHTTCCCHHHHHH------
T ss_pred hhhHhhc-C-ceEEEEeChhHHHHHHHHHHhCcc--ccEEEEecCCCccccccHH--HHHHHHHHHHHhhcCcc------
Confidence 3322221 2 79999999999999999999 998 9999999997765322211 1111111100 000000
Q ss_pred cccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC
Q 020633 199 KMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS 276 (323)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 276 (323)
................... ............. +....+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 145 --~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-- 214 (245)
T 3e0x_A 145 --CIGGIDNPLSEKYFETLEK------DPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV-- 214 (245)
T ss_dssp --HHTCSCSHHHHHHHTTSCS------SHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS--
T ss_pred --cccccchHHHHHHHHHHhc------CcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHc--
Confidence 0000011111111111110 1111111111111 123456788999999999999999999999999998
Q ss_pred CCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 277 ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 277 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
+++++++++++||..++++| +++.+.|.+||
T Consensus 215 ~~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl 245 (245)
T 3e0x_A 215 ENSELKIFETGKHFLLVVNA----KGVAEEIKNFI 245 (245)
T ss_dssp SSEEEEEESSCGGGHHHHTH----HHHHHHHHTTC
T ss_pred CCceEEEeCCCCcceEEecH----HHHHHHHHhhC
Confidence 78999999999999996544 44778887774
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=218.87 Aligned_cols=258 Identities=14% Similarity=0.173 Sum_probs=163.2
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCcccc---------HHHHHH---HHhhCCcEEEEecCCC-CcCCCCCcc--
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWM---------FQKICI---SFATWGYAVFAADLLG-HGRSDGIRC-- 102 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~---------~~~~~~---~l~~~g~~v~~~d~~G-~G~s~~~~~-- 102 (323)
+| +|+|..+++.+...+|+|||+||++++.. . |..++. .|++.||+|+++|+|| +|.|+....
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~ 120 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAE-PYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 120 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSC-SCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred cceeEEEEecccccccCCCeEEEeCCCCCccc-cccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccC
Confidence 67 89999998765334689999999998877 5 777764 3767799999999999 688865421
Q ss_pred -----------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 103 -----------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 103 -----------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
..++++++++|+.++++.+..+ +++ |+||||||.+|+.+|.++|++ |+++|++++......
T Consensus 121 ~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~------~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~ 193 (377)
T 2b61_A 121 PQTGKPYGSQFPNIVVQDIVKVQKALLEHLGIS------HLKAIIGGSFGGMQANQWAIDYPDF-MDNIVNLCSSIYFSA 193 (377)
T ss_dssp TTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCC------CEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSSCCH
T ss_pred ccccccccccCCcccHHHHHHHHHHHHHHcCCc------ceeEEEEEChhHHHHHHHHHHCchh-hheeEEeccCccccc
Confidence 0358999999999999988643 787 999999999999999999998 999999998754321
Q ss_pred CCchhhHHHHHhhhhhhhhccccc------------------------CCcc---cccccccC--------ChHHHHHHh
Q 020633 171 NMKPSKLHLFMYGLLFGLADTWAA------------------------MPDN---KMVGKAIK--------DPEKLKVIA 215 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~---~~~~~~~~--------~~~~~~~~~ 215 (323)
. ...........+.. .+.+.. .... ..+..... .........
T Consensus 194 ~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (377)
T 2b61_A 194 E--AIGFNHVMRQAVIN-DPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLS 270 (377)
T ss_dssp H--HHHHHHHHHHHHHT-STTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHH
T ss_pred c--chhHHHHHHHHHhc-CccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHH
Confidence 0 00000000000000 000000 0000 00000000 000000000
Q ss_pred cCCCCcCCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCc----hhHHHHHHHcCCCCccEE
Q 020633 216 SNPRRYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCP----TSSKLLYEKASSADKSIK 282 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~ 282 (323)
.....+................. .....+.++++|+|+|+|++|.++|+ +..+.+.+.+ ++++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~--~~~~~~ 348 (377)
T 2b61_A 271 YQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG--VDLHFY 348 (377)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT--CEEEEE
T ss_pred hhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcC--CCceEE
Confidence 00000000001111111111111 01345678899999999999999999 7788888877 788999
Q ss_pred Eec-CCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 283 IYD-GMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 283 ~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++ ++||+.++++| +++.+.|.+||++
T Consensus 349 ~i~~~~gH~~~~e~p----~~~~~~i~~fl~~ 376 (377)
T 2b61_A 349 EFPSDYGHDAFLVDY----DQFEKRIRDGLAG 376 (377)
T ss_dssp EECCTTGGGHHHHCH----HHHHHHHHHHHHT
T ss_pred EeCCCCCchhhhcCH----HHHHHHHHHHHhc
Confidence 999 99999996554 4599999999964
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=197.49 Aligned_cols=220 Identities=15% Similarity=0.110 Sum_probs=166.3
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc-
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY- 103 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~- 103 (323)
++..+.+.+.. +| ++.++.+.|.+. ++.|+||++||++++.. .+..+++.|+++||.|+++|++|+|.+......
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~ 80 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNADGPLPIVIVVQEIFGVHE-HIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI 80 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCH-HHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH
T ss_pred cceeeeEEEec-CCcceEEEEecCCCCCCCCCEEEEEcCcCccCH-HHHHHHHHHHHCCcEEEEecccccCCCCCchhhH
Confidence 45667777877 67 999999988764 45799999999998877 889999999999999999999999876532211
Q ss_pred ---------CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 104 ---------LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 104 ---------~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
..+.+...+|+.++++++.... .+..+++++|||+||.+++.++..+|+ +++++++.+.........
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~--~~~~v~~~~~~~~~~~~~- 156 (241)
T 3f67_A 81 PTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ--LKAAVAWYGKLVGEKSLN- 156 (241)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT--CCEEEEESCCCSCCCCSS-
T ss_pred HHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC--cceEEEEeccccCCCccC-
Confidence 1234567899999999998664 334589999999999999999999887 677776554422110000
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
. ... ....+.++++|+|++
T Consensus 157 --------------------------~---~~~--------------------------------~~~~~~~~~~P~l~~ 175 (241)
T 3f67_A 157 --------------------------S---PKH--------------------------------PVDIAVDLNAPVLGL 175 (241)
T ss_dssp --------------------------S---CCC--------------------------------HHHHGGGCCSCEEEE
T ss_pred --------------------------C---ccC--------------------------------HHHhhhhcCCCEEEE
Confidence 0 000 123456678999999
Q ss_pred eeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC----chhHHHHHHHHHHHHHH
Q 020633 255 HGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP----DENANLVLKDMREWIDE 313 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~----~~~~~~~~~~i~~fl~~ 313 (323)
+|++|.++|.+..+.+.+.+. +++++++++++++|.+..+.+ .+..++.++.+.+||++
T Consensus 176 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 176 YGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp EETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred EecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999888888874 357899999999999874322 34457788999999865
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-29 Score=203.51 Aligned_cols=279 Identities=14% Similarity=0.088 Sum_probs=175.1
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHH-HHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ-KICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
...+..+.+.+.+.|| ++.+..+.|.+ .++.|+||++||++++.. .|. .++..|+++||.|+++|+||+|.|.+.
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~ 141 (367)
T 2hdw_A 63 SAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKE-QSSGLYAQTMAERGFVTLAFDPSYTGESGGQ 141 (367)
T ss_dssp CTTEEEEEEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTT-SHHHHHHHHHHHTTCEEEEECCTTSTTSCCS
T ss_pred CCCceeEEEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcch-hhHHHHHHHHHHCCCEEEEECCCCcCCCCCc
Confidence 3445667788888889 99999998765 356799999999998776 555 488999999999999999999999865
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC-------CCCCc
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-------PENMK 173 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~-------~~~~~ 173 (323)
.....+....++|+.++++++.....++..+++++|||+||.+++.++..+|+ ++++|+++|.... .....
T Consensus 142 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~~~v~~~p~~~~~~~~~~~~~~~~ 219 (367)
T 2hdw_A 142 PRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKR--VKAVVTSTMYDMTRVMSKGYNDSVT 219 (367)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCCHHHHHHHTTTTCCC
T ss_pred CccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCC--ccEEEEeccccccHHHhhhhccccc
Confidence 54444577889999999999987644345689999999999999999999884 9999999875310 00000
Q ss_pred hhhHHHHHhhh----hhhhhcc-cccCCcccccccccCCh---HHHHHHhcCC----CC--cCCCCchhHHHHHHHHHHH
Q 020633 174 PSKLHLFMYGL----LFGLADT-WAAMPDNKMVGKAIKDP---EKLKVIASNP----RR--YTGKPRVGTMREIARVCQY 239 (323)
Q Consensus 174 ~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~ 239 (323)
........... ...+... ............ .... .....+.... .. ............+.. .+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 296 (367)
T 2hdw_A 220 LEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKG-GEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN--MP 296 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCS-CCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT--SC
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceeecCCCcccc-ccccccCCccceeecccccCcccccccchhhhhhHHHhcC--CC
Confidence 00000000000 0000000 000000000000 0001 1111111100 00 000000000000000 00
Q ss_pred HHhcCCCCC-cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 240 IQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 240 ~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
....+.+++ +|+|+++|++|. +.+.++.+++.. .+++++++++++||..+++.++.. +.+.+.+||++++
T Consensus 297 ~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~-~~~~~~~~~~g~gH~~~~~~~~~~---~~~~i~~fl~~~l 367 (367)
T 2hdw_A 297 ILTYIKEISPRPILLIHGERAH--SRYFSETAYAAA-AEPKELLIVPGASHVDLYDRLDRI---PFDRIAGFFDEHL 367 (367)
T ss_dssp SCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHS-CSSEEEEEETTCCTTHHHHCTTTS---CHHHHHHHHHHHC
T ss_pred hhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhC-CCCeeEEEeCCCCeeeeecCchhH---HHHHHHHHHHhhC
Confidence 123456778 999999999998 778888887763 367899999999999876666532 6788899998763
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=203.08 Aligned_cols=118 Identities=16% Similarity=0.171 Sum_probs=99.6
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc----CCChH
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY----LGDME 108 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~ 108 (323)
.+...+| +++|...|. +++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|..+... .++.+
T Consensus 8 ~~~~~~~~~~~~~~~g~-----g~~~vllHG~~~~~~-~w~~~~~~l~~-~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~ 80 (291)
T 3qyj_A 8 TIVDTTEARINLVKAGH-----GAPLLLLHGYPQTHV-MWHKIAPLLAN-NFTVVATDLRGYGDSSRPASVPHHINYSKR 80 (291)
T ss_dssp EEEECSSCEEEEEEECC-----SSEEEEECCTTCCGG-GGTTTHHHHTT-TSEEEEECCTTSTTSCCCCCCGGGGGGSHH
T ss_pred eEEecCCeEEEEEEcCC-----CCeEEEECCCCCCHH-HHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccccccCHH
Confidence 3444566 999988763 468999999998877 89899988865 699999999999999865432 25788
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
.+++|+.++++.+..+ +++++||||||.+|+.+|.++|++ |+++|++++.
T Consensus 81 ~~~~~~~~~~~~l~~~------~~~l~GhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~ 130 (291)
T 3qyj_A 81 VMAQDQVEVMSKLGYE------QFYVVGHDRGARVAHRLALDHPHR-VKKLALLDIA 130 (291)
T ss_dssp HHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCC
T ss_pred HHHHHHHHHHHHcCCC------CEEEEEEChHHHHHHHHHHhCchh-ccEEEEECCC
Confidence 9999999999988643 899999999999999999999999 9999999864
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=189.08 Aligned_cols=203 Identities=15% Similarity=0.110 Sum_probs=162.9
Q ss_pred ccceeEEEcCCCcEEEEEecCCCC--CcceEEEEecCCC---CC-ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 29 RNGKKYFETPNGKLFTQSFLPLDQ--KVKATVYMTHGYG---SD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~--~~~~~vv~~HG~~---~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..+.+.+.+.+|++.++.+.|.+. +++|+||++||++ +. ....|..+++.|+++||.|+++|+||+|.|.....
T Consensus 9 ~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 88 (220)
T 2fuk_A 9 ESAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD 88 (220)
T ss_dssp SCEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC
T ss_pred cceEEEEeCCCCeEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcc
Confidence 446778888888888988988775 4589999999953 22 22257889999999999999999999999976542
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
......+|+.++++++....+ ..+++++|||+||.+++.++.++ + ++++|+++|......
T Consensus 89 ---~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--~-v~~~v~~~~~~~~~~------------ 148 (220)
T 2fuk_A 89 ---HGDGEQDDLRAVAEWVRAQRP--TDTLWLAGFSFGAYVSLRAAAAL--E-PQVLISIAPPAGRWD------------ 148 (220)
T ss_dssp ---TTTHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHH--C-CSEEEEESCCBTTBC------------
T ss_pred ---cCchhHHHHHHHHHHHHhcCC--CCcEEEEEECHHHHHHHHHHhhc--c-ccEEEEecccccchh------------
Confidence 346778999999999988753 56899999999999999999988 5 999999998764321
Q ss_pred hhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
+ ..+. ..+|+++++|++|.++
T Consensus 149 --------------------------------------~--------------------~~~~-~~~p~l~i~g~~D~~~ 169 (220)
T 2fuk_A 149 --------------------------------------F--------------------SDVQ-PPAQWLVIQGDADEIV 169 (220)
T ss_dssp --------------------------------------C--------------------TTCC-CCSSEEEEEETTCSSS
T ss_pred --------------------------------------h--------------------hhcc-cCCcEEEEECCCCccc
Confidence 0 0111 1579999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+.++.+.+.+. +++++++++++||.+.. + .+++.+.+.+|+++.+.
T Consensus 170 ~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~-~----~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 170 DPQAVYDWLETLE-QQPTLVRMPDTSHFFHR-K----LIDLRGALQHGVRRWLP 217 (220)
T ss_dssp CHHHHHHHHTTCS-SCCEEEEETTCCTTCTT-C----HHHHHHHHHHHHGGGCS
T ss_pred CHHHHHHHHHHhC-cCCcEEEeCCCCceehh-h----HHHHHHHHHHHHHHHhh
Confidence 9999999988875 57899999999999883 2 44588888999887764
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=205.99 Aligned_cols=127 Identities=12% Similarity=0.141 Sum_probs=109.8
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC---------CcEEEEecCCCCcCCCCCc
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW---------GYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~ 101 (323)
..+....+| +|+|...++.+ ...++|||+||++++.. .|..++..|.+. ||+|+++|+||||.|+...
T Consensus 69 ~~~~~~i~g~~i~~~~~~~~~-~~~~plll~HG~~~s~~-~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~ 146 (388)
T 4i19_A 69 PQFTTEIDGATIHFLHVRSPE-PDATPMVITHGWPGTPV-EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLK 146 (388)
T ss_dssp CEEEEEETTEEEEEEEECCSS-TTCEEEEEECCTTCCGG-GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCS
T ss_pred CcEEEEECCeEEEEEEccCCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 445566788 99999887654 45789999999999877 899999999875 8999999999999998766
Q ss_pred ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
....+++++++++.++++.+.. .+++++||||||.+++.+|.++|++ |+++++++|...
T Consensus 147 ~~~~~~~~~a~~~~~l~~~lg~------~~~~l~G~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 205 (388)
T 4i19_A 147 SAGWELGRIAMAWSKLMASLGY------ERYIAQGGDIGAFTSLLLGAIDPSH-LAGIHVNLLQTN 205 (388)
T ss_dssp SCCCCHHHHHHHHHHHHHHTTC------SSEEEEESTHHHHHHHHHHHHCGGG-EEEEEESSCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHcCC------CcEEEEeccHHHHHHHHHHHhChhh-ceEEEEecCCCC
Confidence 5456899999999999998764 3899999999999999999999999 999999987554
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=207.51 Aligned_cols=245 Identities=16% Similarity=0.157 Sum_probs=169.5
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC--- 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--- 102 (323)
.+..+++.+...+| +|+++.+.|.+.++.|+||++||++++.. .|..+. .+.+.||.|+++|+||+|.|.....
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~-~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~ 156 (346)
T 3fcy_A 79 FAECYDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSG-DWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVT 156 (346)
T ss_dssp TEEEEEEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSC-CSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCS
T ss_pred ceEEEEEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCC-Chhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccC
Confidence 45567788888899 99999999876567899999999998876 566655 4557899999999999998875421
Q ss_pred ----------------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 103 ----------------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 103 ----------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
....+...++|+.++++++.....++..+++++|||+||.+++.+|..+|+ |+++|+++|..
T Consensus 157 ~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~--v~~~vl~~p~~ 234 (346)
T 3fcy_A 157 GNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR--VRKVVSEYPFL 234 (346)
T ss_dssp SCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT--CCEEEEESCSS
T ss_pred CCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc--ccEEEECCCcc
Confidence 112355677999999999987654445689999999999999999999987 99999998864
Q ss_pred cCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh-cCCCCcCCCCchhHHHHHHHHHHHHHhcCC
Q 020633 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
.... ...... . . ..........+. ..+.. ............ .+....+.
T Consensus 235 ~~~~---------~~~~~~---~-------~------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~d~~~~~~ 284 (346)
T 3fcy_A 235 SDYK---------RVWDLD---L-------A------KNAYQEITDYFRLFDPRH----ERENEVFTKLGY-IDVKNLAK 284 (346)
T ss_dssp CCHH---------HHHHTT---C-------C------CGGGHHHHHHHHHHCTTC----TTHHHHHHHHGG-GCHHHHGG
T ss_pred cCHH---------HHhhcc---c-------c------ccchHHHHHHHHhcCCCc----chHHHHHHHhCc-ccHHHHHH
Confidence 3110 000000 0 0 000000000000 00000 000000000000 01234567
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++|+|+++|++|.++|++.+..+++.+.. ++++++++++||... ++ +.+.+.+||++.
T Consensus 285 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~----~~----~~~~i~~fl~~l 344 (346)
T 3fcy_A 285 RIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVYPDYGHEPM----RG----FGDLAMQFMLEL 344 (346)
T ss_dssp GCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEETTCCSSCC----TT----HHHHHHHHHHTT
T ss_pred hcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEeCCCCCcCH----HH----HHHHHHHHHHHh
Confidence 8899999999999999999999999888843 689999999999998 33 788899999753
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.8e-33 Score=219.81 Aligned_cols=259 Identities=12% Similarity=0.086 Sum_probs=160.0
Q ss_pred cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc----ccCCChHHHh
Q 020633 37 TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR----CYLGDMEKVA 111 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~ 111 (323)
..+| +++|...+. +|+||++||++++.. .|..+++.|+ +||+|+++|+||||.|.... ...+++++++
T Consensus 11 ~~~g~~~~~~~~g~-----~p~vv~lHG~~~~~~-~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (304)
T 3b12_A 11 DVGDVTINCVVGGS-----GPALLLLHGFPQNLH-MWARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMA 83 (304)
Confidence 3477 999888762 579999999998877 8999999997 78999999999999998653 2345889999
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH-h-hhhhh--
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM-Y-GLLFG-- 187 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~-~-~~~~~-- 187 (323)
+|+.++++++..+ +++|+||||||.+++.+|.++|++ |+++|++++................. . .....
T Consensus 84 ~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
T 3b12_A 84 SDQRELMRTLGFE------RFHLVGHARGGRTGHRMALDHPDS-VLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQP 156 (304)
Confidence 9999999998643 799999999999999999999998 99999999875433211100000000 0 00000
Q ss_pred --hhcccccCCccccccc-cc----CCh--HHHHHHhcCCCCcCCCCchhHHHHHHHHH------HHHHhcCCCCCcCEE
Q 020633 188 --LADTWAAMPDNKMVGK-AI----KDP--EKLKVIASNPRRYTGKPRVGTMREIARVC------QYIQDNFSKVTVPFL 252 (323)
Q Consensus 188 --~~~~~~~~~~~~~~~~-~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~l 252 (323)
............+... .. ... ............................. ......+.++++|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 236 (304)
T 3b12_A 157 APYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPAL 236 (304)
Confidence 0000000000000000 00 000 00000000000000000000000000000 001112678899999
Q ss_pred EEeeCCCccc-CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 253 TVHGTADGVT-CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+|++|..+ +....+.+.+.. ++++++++ ++||++++++|++ +.+.|.+||++...
T Consensus 237 ii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~----~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 237 VFSGSAGLMHSLFEMQVVWAPRL--ANMRFASL-PGGHFFVDRFPDD----TARILREFLSDARS 294 (304)
Confidence 9999999554 555566666655 67888889 9999999777765 89999999987753
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=202.73 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=95.1
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 119 (323)
+++|+..+.. +|+|||+||++++.. .|..+++.|++ .+|+|+++|+||||.|+......++++++++|+.++++
T Consensus 28 ~~~~~~~g~~----~p~lvllHG~~~~~~-~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~ 102 (316)
T 3c5v_A 28 TFRVYKSGSE----GPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVE 102 (316)
T ss_dssp EEEEEEECSS----SCEEEEECCTTCCGG-GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHH
T ss_pred EEEEEecCCC----CcEEEEECCCCcccc-cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 6777776632 578999999987776 89999999976 26999999999999998654444689999999999999
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~ 165 (323)
++.... ..+++|+||||||.+|+.+|.+ +| . |+++|++++.
T Consensus 103 ~l~~~~---~~~~~lvGhSmGG~ia~~~A~~~~~p-~-v~~lvl~~~~ 145 (316)
T 3c5v_A 103 AMYGDL---PPPIMLIGHSMGGAIAVHTASSNLVP-S-LLGLCMIDVV 145 (316)
T ss_dssp HHHTTC---CCCEEEEEETHHHHHHHHHHHTTCCT-T-EEEEEEESCC
T ss_pred HHhccC---CCCeEEEEECHHHHHHHHHHhhccCC-C-cceEEEEccc
Confidence 995321 1479999999999999999986 35 4 9999999864
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=193.37 Aligned_cols=207 Identities=16% Similarity=0.194 Sum_probs=144.4
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC------
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL------ 104 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~------ 104 (323)
.+....|| +|.++.|.|.+..+.|+||++||++++.. ..+..+++.|+++||.|+++|+||||.|.......
T Consensus 33 ~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~ 112 (259)
T 4ao6_A 33 GFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVV 112 (259)
T ss_dssp EEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGG
T ss_pred EEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhh
Confidence 33445689 99999999987678899999999987642 36788899999999999999999999886432110
Q ss_pred ------------CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC
Q 020633 105 ------------GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172 (323)
Q Consensus 105 ------------~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~ 172 (323)
......+.|....++++.... +..++.++|+|+||.+++.++...|. +++.|+..+......
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~--d~~rv~~~G~S~GG~~a~~~a~~~pr--i~Aav~~~~~~~~~~-- 186 (259)
T 4ao6_A 113 GLDAFPRMWHEGGGTAAVIADWAAALDFIEAEE--GPRPTGWWGLSMGTMMGLPVTASDKR--IKVALLGLMGVEGVN-- 186 (259)
T ss_dssp GSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECTHHHHHHHHHHHHCTT--EEEEEEESCCTTSTT--
T ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhcc--CCceEEEEeechhHHHHHHHHhcCCc--eEEEEEecccccccc--
Confidence 012233456666677665543 26799999999999999999999886 777776543321100
Q ss_pred chhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.....+.+.++++|+|
T Consensus 187 ----------------------------------------------------------------~~~~~~~a~~i~~P~L 202 (259)
T 4ao6_A 187 ----------------------------------------------------------------GEDLVRLAPQVTCPVR 202 (259)
T ss_dssp ----------------------------------------------------------------HHHHHHHGGGCCSCEE
T ss_pred ----------------------------------------------------------------ccchhhhhccCCCCEE
Confidence 0002344567899999
Q ss_pred EEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++|++|..+|++.++.+++.+.+++.+++++++ +|... | ..+..+.+.+||+++++
T Consensus 203 i~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~---p---~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 203 YLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV---P---TWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC---C---HHHHTHHHHHHHHHHCC
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc---C---HHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999777788899987 66543 2 23477889999999874
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=201.57 Aligned_cols=238 Identities=16% Similarity=0.121 Sum_probs=162.8
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
....+++.++. +| +|.++.+.|.+.++.|+||++||++++.. .+......|+++||.|+++|+||+|.|........
T Consensus 124 ~~~~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~ 201 (386)
T 2jbw_A 124 SPPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAG 201 (386)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCS
T ss_pred CCCeEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHH-HHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCc
Confidence 34567777777 78 99999998876567899999999998776 34445888889999999999999999843333333
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
++++.+.++.+++.. ....+..+++|+|||+||.+++.++.. +++ ++++|++ +.......... +
T Consensus 202 ~~~~~~~~~~~~l~~---~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~-~~a~v~~-~~~~~~~~~~~----------~ 265 (386)
T 2jbw_A 202 DYEKYTSAVVDLLTK---LEAIRNDAIGVLGRSLGGNYALKSAAC-EPR-LAACISW-GGFSDLDYWDL----------E 265 (386)
T ss_dssp CHHHHHHHHHHHHHH---CTTEEEEEEEEEEETHHHHHHHHHHHH-CTT-CCEEEEE-SCCSCSTTGGG----------S
T ss_pred cHHHHHHHHHHHHHh---CCCcCcccEEEEEEChHHHHHHHHHcC-Ccc-eeEEEEe-ccCChHHHHHh----------c
Confidence 555555555555544 221224589999999999999999998 777 9999999 77654322110 0
Q ss_pred hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH-HHHHH--HHhcCCCCCcCEEEEeeCCCccc
Q 020633 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-RVCQY--IQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
........... ...... .... ..... ....+.++++|+|+++|++|. +
T Consensus 266 ---------------------~~~~~~~~~~~----~g~~~~---~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v 316 (386)
T 2jbw_A 266 ---------------------TPLTKESWKYV----SKVDTL---EEARLHVHAALETRDVLSQIACPTYILHGVHDE-V 316 (386)
T ss_dssp ---------------------CHHHHHHHHHH----TTCSSH---HHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-S
T ss_pred ---------------------cHHHHHHHHHH----hCCCCH---HHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-C
Confidence 00000000000 000000 0000 11110 123467789999999999999 9
Q ss_pred CchhHHHHHHHc-CCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 263 CPTSSKLLYEKA-SSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 263 ~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+++.++.+.+.+ .. ++++++++++||... +++ +++.+.|.+||++++..
T Consensus 317 ~~~~~~~l~~~l~~~-~~~~~~~~~~gH~~~-~~~----~~~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 317 PLSFVDTVLELVPAE-HLNLVVEKDGDHCCH-NLG----IRPRLEMADWLYDVLVA 366 (386)
T ss_dssp CTHHHHHHHHHSCGG-GEEEEEETTCCGGGG-GGT----THHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHhcCC-CcEEEEeCCCCcCCc-cch----HHHHHHHHHHHHHhcCC
Confidence 999999999988 43 689999999999764 333 44899999999998864
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=192.43 Aligned_cols=229 Identities=9% Similarity=0.053 Sum_probs=151.7
Q ss_pred ccceeEEEcCCC-cEEEEEecCC------CCCcceEEEEecC---CCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPL------DQKVKATVYMTHG---YGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD 98 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~------~~~~~~~vv~~HG---~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 98 (323)
..+...+. .+| ++.+..|.|. ...+.|+||++|| .+++.. .|..++..|+++||.|+++|+||+|.+.
T Consensus 3 ~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 3 QVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR-EEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT-THHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred ceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc-cchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 34455553 455 8888888876 2356899999999 444444 7888999999999999999999999443
Q ss_pred CCcccCCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhc--------------CCCceeEEEE
Q 020633 99 GIRCYLGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQS--------------EPNTWTGLIF 161 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~--------------p~~~v~~~vl 161 (323)
. .+....+|+.++++++.... +++..+++|+|||+||.+|+.++..+ +.+ ++++|+
T Consensus 81 ~------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~~v~ 153 (277)
T 3bxp_A 81 S------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQ-HAAIIL 153 (277)
T ss_dssp C------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCC-CSEEEE
T ss_pred c------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCC-cCEEEE
Confidence 2 23345566666666665431 11245899999999999999999885 566 999999
Q ss_pred ccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH
Q 020633 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|............... ...+. ..... ...
T Consensus 154 ~~p~~~~~~~~~~~~~~~-------------------------------~~~~~-~~~~~-----------------~~~ 184 (277)
T 3bxp_A 154 GYPVIDLTAGFPTTSAAR-------------------------------NQITT-DARLW-----------------AAQ 184 (277)
T ss_dssp ESCCCBTTSSSSSSHHHH-------------------------------HHHCS-CGGGS-----------------BGG
T ss_pred eCCcccCCCCCCCccccc-------------------------------hhccc-hhhhc-----------------CHh
Confidence 998765332211100000 00000 00000 012
Q ss_pred hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCc-----------hhHHHHHHHHH
Q 020633 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPD-----------ENANLVLKDMR 308 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~-----------~~~~~~~~~i~ 308 (323)
..+.++.+|+|+++|++|.++|++.++.+.+.+. +.+++++++++++|.+.+..+. ...+++.+.+.
T Consensus 185 ~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (277)
T 3bxp_A 185 RLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLAL 264 (277)
T ss_dssp GGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHH
T ss_pred hccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHH
Confidence 3445668899999999999999999988888773 2456899999999976655441 34677899999
Q ss_pred HHHHHHH
Q 020633 309 EWIDERV 315 (323)
Q Consensus 309 ~fl~~~~ 315 (323)
+||+++.
T Consensus 265 ~fl~~~~ 271 (277)
T 3bxp_A 265 RWLQEQG 271 (277)
T ss_dssp HHHHHTT
T ss_pred HHHHhcc
Confidence 9998764
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=206.19 Aligned_cols=249 Identities=17% Similarity=0.173 Sum_probs=155.6
Q ss_pred cceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC--CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
.+..++.+.+|.+++. +.+ .+|+|||+||+| ++.. .|..+++.|. +||+|+++|+||||.|+.......++
T Consensus 21 ~~~~~v~~~~~~~~~~-~~~----~~p~vv~lHG~G~~~~~~-~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~~~~~ 93 (292)
T 3l80_A 21 LNKEMVNTLLGPIYTC-HRE----GNPCFVFLSGAGFFSTAD-NFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVGL 93 (292)
T ss_dssp CEEEEECCTTSCEEEE-EEC----CSSEEEEECCSSSCCHHH-HTHHHHTTSC-TTSEEEEECCTTSTTSCCCCCTTCCH
T ss_pred cCcceEEecCceEEEe-cCC----CCCEEEEEcCCCCCcHHH-HHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCcccccH
Confidence 3455666666688776 222 258999999654 4345 8889998887 58999999999999998444445699
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC------CCCCchhhHHHHH
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI------PENMKPSKLHLFM 181 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~------~~~~~~~~~~~~~ 181 (323)
+++++|+.++++++..+ +++|+||||||.+|+.+|.++|++ |+++|+++|.... ....... ... .
T Consensus 94 ~~~~~~l~~~l~~~~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~-~ 164 (292)
T 3l80_A 94 RDWVNAILMIFEHFKFQ------SYLLCVHSIGGFAALQIMNQSSKA-CLGFIGLEPTTVMIYRAGFSSDLYPQ-LAL-R 164 (292)
T ss_dssp HHHHHHHHHHHHHSCCS------EEEEEEETTHHHHHHHHHHHCSSE-EEEEEEESCCCHHHHHHCTTSSSSHH-HHH-H
T ss_pred HHHHHHHHHHHHHhCCC------CeEEEEEchhHHHHHHHHHhCchh-eeeEEEECCCCcchhhhccccccchh-HHH-H
Confidence 99999999999998643 899999999999999999999998 9999999954321 0000000 000 0
Q ss_pred hhhhhhhhcccccCCcccccccccCCh----------HHHHHH-hcCC-CCcCCCCchhHHHHHHHHHHHHHhcCCCCCc
Q 020633 182 YGLLFGLADTWAAMPDNKMVGKAIKDP----------EKLKVI-ASNP-RRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
...+........ .........+... .....+ .... ........... .+..+.+.+ ++
T Consensus 165 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~l~~-~~ 233 (292)
T 3l80_A 165 RQKLKTAADRLN--YLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGE--------EDFKTGISE-KI 233 (292)
T ss_dssp HHTCCSHHHHHH--HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCG--------GGGCCCCCT-TS
T ss_pred HHHHhccCchhh--hHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcc--------hhhhhccCC-CC
Confidence 000000000000 0000000000000 000111 1111 00000000000 001134556 89
Q ss_pred CEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 250 PFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
|+|+|+|++|..++.+ + .+.+.+ ++.+ ++++++||++++++|+ ++.+.|.+||+++
T Consensus 234 P~lii~g~~D~~~~~~-~-~~~~~~--~~~~-~~~~~~gH~~~~e~p~----~~~~~i~~fl~~~ 289 (292)
T 3l80_A 234 PSIVFSESFREKEYLE-S-EYLNKH--TQTK-LILCGQHHYLHWSETN----SILEKVEQLLSNH 289 (292)
T ss_dssp CEEEEECGGGHHHHHT-S-TTCCCC--TTCE-EEECCSSSCHHHHCHH----HHHHHHHHHHHTC
T ss_pred CEEEEEccCccccchH-H-HHhccC--CCce-eeeCCCCCcchhhCHH----HHHHHHHHHHHhc
Confidence 9999999999999888 5 666655 6777 9999999999966554 4999999999854
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-28 Score=191.34 Aligned_cols=231 Identities=12% Similarity=0.127 Sum_probs=168.1
Q ss_pred eEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 33 KYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
..+...+| ++.++...+.. .++.|+||++||.+ ++.. .+..++..|+++||.|+++|+||+|.|... .
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~----~ 91 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQR-ESDPLALAFLAQGYQVLLLNYTVMNKGTNY----N 91 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGG-GSHHHHHHHHHTTCEEEEEECCCTTSCCCS----C
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCch-hhHHHHHHHHHCCCEEEEecCccCCCcCCC----C
Confidence 45566778 88887766542 15679999999954 3334 678899999999999999999999997633 2
Q ss_pred ChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhh-cCCCceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 106 DMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQ-SEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
.+....+|+.++++++.... .++..+++|+|||+||.+++.++.. .+.+ ++++|+++|............
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-~~~~v~~~p~~~~~~~~~~~~----- 165 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHR-PKGVILCYPVTSFTFGWPSDL----- 165 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTC-CSEEEEEEECCBTTSSCSSSS-----
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCC-ccEEEEecCcccHHhhCCcch-----
Confidence 56677888888888887653 2346799999999999999999998 6777 999999998766432211000
Q ss_pred hhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
....++ ... .... .....+.++.+|+|+++|++|.+
T Consensus 166 --------------~~~~~~----~~~---------~~~~-----------------~~~~~~~~~~~P~lii~G~~D~~ 201 (276)
T 3hxk_A 166 --------------SHFNFE----IEN---------ISEY-----------------NISEKVTSSTPPTFIWHTADDEG 201 (276)
T ss_dssp --------------SSSCCC----CSC---------CGGG-----------------BTTTTCCTTSCCEEEEEETTCSS
T ss_pred --------------hhhhcC----chh---------hhhC-----------------ChhhccccCCCCEEEEecCCCce
Confidence 000000 000 0000 01234567789999999999999
Q ss_pred cCchhHHHHHHHcCC--CCccEEEecCCCcccccCCC---------chhHHHHHHHHHHHHHHHHhhc
Q 020633 262 TCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEP---------DENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~---------~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+|.+.++.+.+.+.. .++++++++++||.+....+ ....+++.+.+.+||+++.+..
T Consensus 202 vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 202 VPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp SCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred eChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 999999999888742 34689999999998886666 4466789999999999987543
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=195.48 Aligned_cols=244 Identities=18% Similarity=0.179 Sum_probs=167.1
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCC-ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc--
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-- 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 102 (323)
.+..+.+.+.+.+| +|.++.+.|.+.++.|+||++||++++ .. .|.... .|+++||.|+++|+||+|.|.....
T Consensus 53 ~~~~~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~-~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~~~ 130 (318)
T 1l7a_A 53 GVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG-EIHEMV-NWALHGYATFGMLVRGQQRSEDTSISP 130 (318)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG-GHHHHH-HHHHTTCEEEEECCTTTSSSCCCCCCS
T ss_pred CeEEEEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCC-Cccccc-chhhCCcEEEEecCCCCCCCCCccccc
Confidence 34566777888889 999999988764668999999999988 66 666655 6778899999999999999975421
Q ss_pred ---------------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 103 ---------------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 103 ---------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
..+.+...++|+.++++++.....++..+++++|||+||.+++.++..+|+ ++++|+++|...
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~--~~~~v~~~p~~~ 208 (318)
T 1l7a_A 131 HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI--PKAAVADYPYLS 208 (318)
T ss_dssp SCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC--CSEEEEESCCSC
T ss_pred CCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC--ccEEEecCCccc
Confidence 011246778999999999987644445689999999999999999999886 888888777532
Q ss_pred CCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCC
Q 020633 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFS 245 (323)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 245 (323)
.. ...... .... ........+.... ............. +....+.
T Consensus 209 ~~---------~~~~~~----~~~~-------------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 255 (318)
T 1l7a_A 209 NF---------ERAIDV----ALEQ-------------PYLEINSFFRRNG-------SPETEVQAMKTLSYFDIMNLAD 255 (318)
T ss_dssp CH---------HHHHHH----CCST-------------TTTHHHHHHHHSC-------CHHHHHHHHHHHHTTCHHHHGG
T ss_pred CH---------HHHHhc----CCcC-------------ccHHHHHHHhccC-------CcccHHHHHHhhccccHHHHHh
Confidence 10 000000 0000 0000000110000 0000001111110 0233456
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++++|+|+++|++|.++|++.+..+.+.+.. .+++++++++||... .+ ..+.+.+||+++++
T Consensus 256 ~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~~~~~H~~~----~~----~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 256 RVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEYI----PA----FQTEKLAFFKQILK 317 (318)
T ss_dssp GCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSCC----HH----HHHHHHHHHHHHHC
T ss_pred hCCCCEEEEeccCCCCCCcccHHHHHhhcCC-CeeEEEccCCCCCCc----ch----hHHHHHHHHHHHhC
Confidence 7789999999999999999999999999853 489999999999933 33 67888999988764
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-28 Score=188.62 Aligned_cols=176 Identities=17% Similarity=0.187 Sum_probs=142.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh----cCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD----SEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~----~~~~~ 128 (323)
+++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.+. .....|+..+++++.. ....+
T Consensus 52 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~---------~~~~~d~~~~~~~l~~~~~~~~~~~ 121 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQP---------DSRGRQLLSALDYLTQRSSVRTRVD 121 (262)
T ss_dssp CCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCH---------HHHHHHHHHHHHHHHHTSTTGGGEE
T ss_pred CCCCEEEEeCCcCCCch-hHHHHHHHHHhCCCEEEEeCCCCCCCCC---------chhHHHHHHHHHHHHhccccccccC
Confidence 56799999999998877 7888999999999999999999998653 2334566666666654 11122
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCCh
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
..+++++|||+||.+++.++.++|+ ++++|+++|+..
T Consensus 122 ~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~p~~~----------------------------------------- 158 (262)
T 1jfr_A 122 ATRLGVMGHSMGGGGSLEAAKSRTS--LKAAIPLTGWNT----------------------------------------- 158 (262)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCS-----------------------------------------
T ss_pred cccEEEEEEChhHHHHHHHHhcCcc--ceEEEeecccCc-----------------------------------------
Confidence 4589999999999999999999987 999999987531
Q ss_pred HHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcCC-CCccEEEecC
Q 020633 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASS-ADKSIKIYDG 286 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 286 (323)
...+.++++|+|+++|++|.+++.+. ++.+.+.+.. .+.+++++++
T Consensus 159 --------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 206 (262)
T 1jfr_A 159 --------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRG 206 (262)
T ss_dssp --------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred --------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCC
Confidence 13345678999999999999999998 9999999843 3468999999
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 287 MYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+||..+.+.++ ++.+.+.+||++++..
T Consensus 207 ~~H~~~~~~~~----~~~~~i~~fl~~~l~~ 233 (262)
T 1jfr_A 207 ASHFTPNTSDT----TIAKYSISWLKRFIDS 233 (262)
T ss_dssp CCTTGGGSCCH----HHHHHHHHHHHHHHSC
T ss_pred CCcCCcccchH----HHHHHHHHHHHHHhcC
Confidence 99999976654 4889999999988753
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=189.88 Aligned_cols=245 Identities=9% Similarity=0.027 Sum_probs=145.3
Q ss_pred CcEEEEEecCCCCCcceEEEEecCCCCCcc-c-cHHHHHHHHhhCCcEEEEec----CCCCcCCCCCcccCCChHHHhhc
Q 020633 40 GKLFTQSFLPLDQKVKATVYMTHGYGSDTG-W-MFQKICISFATWGYAVFAAD----LLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 40 g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~-~~~~~~~~l~~~g~~v~~~d----~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
..++|..+++.+ +.+|+|||+||++++.. | .|..+++.| +.||+|+++| +||||.|+ ....++|
T Consensus 24 ~~~~y~~~g~~~-~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~--------~~~~~~d 93 (335)
T 2q0x_A 24 PYCKIPVFMMNM-DARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQD--------HAHDAED 93 (335)
T ss_dssp TTEEEEEEEECT-TSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCC--------HHHHHHH
T ss_pred CceeEEEeccCC-CCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcc--------ccCcHHH
Confidence 478888888321 34689999999986532 1 467888888 6689999995 59999984 3456678
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh--hcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF--QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~--~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
+.++++.+....+ ..+++|+||||||.+|+.+|. .+|++ |+++|+++|...........................
T Consensus 94 ~~~~~~~l~~~l~--~~~~~LvGhSmGG~iAl~~A~~~~~p~r-V~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (335)
T 2q0x_A 94 VDDLIGILLRDHC--MNEVALFATSTGTQLVFELLENSAHKSS-ITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAE 170 (335)
T ss_dssp HHHHHHHHHHHSC--CCCEEEEEEGGGHHHHHHHHHHCTTGGG-EEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC--CCcEEEEEECHhHHHHHHHHHhccchhc-eeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhc
Confidence 8888887765332 558999999999999999999 47888 999999988654321111110011111011110000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHH-HHHHHHHhcCCCCCcCEEEEeeCCCcccCchh----
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA-RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS---- 266 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~---- 266 (323)
........ .............+..... ............ ....+....+.++++|+|+|+|++|.++|++.
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~ 246 (335)
T 2q0x_A 171 GRGEDSLA-MLKHYDIPITPARLAGGGF---PTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGT 246 (335)
T ss_dssp TCTTCGGG-GTTTCSSCCCHHHHHTCSC---SSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHH
T ss_pred cCcccccc-chhhccCccCHHHHhhccC---CCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHH
Confidence 00000000 0000000000000110000 000000011000 01123456788999999999999999999863
Q ss_pred -HHHHHHHcCCCCcc--------E-----EEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 267 -SKLLYEKASSADKS--------I-----KIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 267 -~~~~~~~~~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+.+.+ ++.+ + ++++++|| + +++.|.+||++..
T Consensus 247 ~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~i~~agH--------e----~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 247 VLEGVRDHT--GCNRVTVSYFNDTCDELRRVLKAAES--------E----HVAAILQFLADED 295 (335)
T ss_dssp HHHHHHHHS--SSSCEEEEECCCEECTTSCEEECCHH--------H----HHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CccccccccccchhhhhhcccCCCCC--------H----HHHHHHHHHHhhh
Confidence 45666666 5665 6 88999999 1 4788888987654
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=188.30 Aligned_cols=214 Identities=18% Similarity=0.175 Sum_probs=153.3
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC--------
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG-------- 105 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-------- 105 (323)
....+| ++. .+.+.+ ++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|........
T Consensus 7 ~~~~~g~~~~--~~~~~~--~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (238)
T 1ufo_A 7 RLTLAGLSVL--ARIPEA--PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81 (238)
T ss_dssp EEEETTEEEE--EEEESS--CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHH
T ss_pred ccccCCEEEE--EEecCC--CccEEEEECCCcccch-HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhH
Confidence 334456 544 344442 5899999999998877 78888999999999999999999999975433221
Q ss_pred --ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 106 --DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 106 --~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
+++..++|+.++++++.... ..+++++|||+||.+++.++..+|+. +++++++++..........
T Consensus 82 ~~~~~~~~~d~~~~~~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~--------- 148 (238)
T 1ufo_A 82 YRVALGFKEEARRVAEEAERRF---GLPLFLAGGSLGAFVAHLLLAEGFRP-RGVLAFIGSGFPMKLPQGQ--------- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEETHHHHHHHHHHHTTCCC-SCEEEESCCSSCCCCCTTC---------
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCcEEEEEEChHHHHHHHHHHhccCc-ceEEEEecCCccchhhhhh---------
Confidence 36678899999999986543 25899999999999999999999987 8999988775432111000
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC-CcCEEEEeeCCCccc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~ 262 (323)
+ ..... .... .. .+....+.++ ++|+++++|++|.++
T Consensus 149 --------~------------~~~~~-~~~~--------------------~~-~~~~~~~~~~~~~P~l~i~g~~D~~~ 186 (238)
T 1ufo_A 149 --------V------------VEDPG-VLAL--------------------YQ-APPATRGEAYGGVPLLHLHGSRDHIV 186 (238)
T ss_dssp --------C------------CCCHH-HHHH--------------------HH-SCGGGCGGGGTTCCEEEEEETTCTTT
T ss_pred --------c------------cCCcc-cchh--------------------hc-CChhhhhhhccCCcEEEEECCCCCcc
Confidence 0 00000 0000 00 0023445667 899999999999999
Q ss_pred CchhHHHHHHHcC-CC---CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 CPTSSKLLYEKAS-SA---DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~-~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+.++.+.+.+. .. ++++++++++||... .+ ..+.+.+||.+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~----~~----~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 187 PLARMEKTLEALRPHYPEGRLARFVEEGAGHTLT----PL----MARVGLAFLEHWLE 236 (238)
T ss_dssp THHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCC----HH----HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccH----HH----HHHHHHHHHHHHHh
Confidence 9999999999883 22 789999999999987 33 34556666666654
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=199.29 Aligned_cols=259 Identities=16% Similarity=0.115 Sum_probs=156.5
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHH----------------HHHHHHhhCCcEEEEecCCCCcCCCCCccc-
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ----------------KICISFATWGYAVFAADLLGHGRSDGIRCY- 103 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~----------------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~- 103 (323)
.+.+..+..+ .+|+||++||++++.. .|. .+++.|+++||+|+++|+||||.|......
T Consensus 39 ~~~~~~~~~~---~~~~vv~~hG~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 114 (354)
T 2rau_A 39 SLHKVNLIGG---GNDAVLILPGTWSSGE-QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQ 114 (354)
T ss_dssp EEEEEEETTC---CEEEEEEECCTTCCHH-HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGG
T ss_pred EEEeecccCC---CCCEEEEECCCCCCcc-ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccc
Confidence 5655555443 4789999999998765 444 788999999999999999999999754431
Q ss_pred -----CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCCCchh--
Q 020633 104 -----LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKPS-- 175 (323)
Q Consensus 104 -----~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~~~~~-- 175 (323)
..+++++++|+.++++++....+ ..+++++|||+||.+++.++.++ |++ |+++|++++...........
T Consensus 115 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~p~~-v~~lvl~~~~~~~~~~~~~~~~ 191 (354)
T 2rau_A 115 LSFTANWGWSTWISDIKEVVSFIKRDSG--QERIYLAGESFGGIAALNYSSLYWKND-IKGLILLDGGPTKHGIRPKFYT 191 (354)
T ss_dssp GGGGTTCSHHHHHHHHHHHHHHHHHHHC--CSSEEEEEETHHHHHHHHHHHHHHHHH-EEEEEEESCSCBCTTCC--CCC
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHhcC--CceEEEEEECHhHHHHHHHHHhcCccc-cceEEEecccccccCcccchhh
Confidence 35789999999999999865432 45899999999999999999998 988 99999997654321110000
Q ss_pred ---hHHHHHhhhh-h------hhhcc----cccCCcccccccccC---ChHHHHHHh---cCCCCcCCCCchhHHHHHHH
Q 020633 176 ---KLHLFMYGLL-F------GLADT----WAAMPDNKMVGKAIK---DPEKLKVIA---SNPRRYTGKPRVGTMREIAR 235 (323)
Q Consensus 176 ---~~~~~~~~~~-~------~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (323)
.....+.... . .+... ............... +......+. .++..+.. ...........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 270 (354)
T 2rau_A 192 PEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPY-SKKEDMFPILA 270 (354)
T ss_dssp CSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTC-CCHHHHHHHHH
T ss_pred hhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCC-ccHHHHHHHHh
Confidence 0000110000 0 00000 000000000000000 000011111 11111100 01111111110
Q ss_pred H-----------HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHH
Q 020633 236 V-----------CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVL 304 (323)
Q Consensus 236 ~-----------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 304 (323)
. ..+....+.++++|+|+|+|++|.++|. .++ .+. +++++++++++||..++++++ ..+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~----~l~-~~~~~~~~~~~gH~~~~~~~~-~~~~~~ 343 (354)
T 2rau_A 271 SFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DSK----ILP-SNSEIILLKGYGHLDVYTGEN-SEKDVN 343 (354)
T ss_dssp TSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CGG----GSC-TTCEEEEETTCCGGGGTSSTT-HHHHTH
T ss_pred hhccccccccccCcccccccccCCCCEEEEecCCCCCCcc-chh----hhc-cCceEEEcCCCCCchhhcCCC-cHHHHH
Confidence 0 0112345678999999999999998764 332 222 678999999999999877653 467799
Q ss_pred HHHHHHHHHH
Q 020633 305 KDMREWIDER 314 (323)
Q Consensus 305 ~~i~~fl~~~ 314 (323)
+.|.+||+++
T Consensus 344 ~~i~~fl~~~ 353 (354)
T 2rau_A 344 SVVLKWLSQQ 353 (354)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999864
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=200.47 Aligned_cols=264 Identities=14% Similarity=0.126 Sum_probs=161.2
Q ss_pred CcccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHH-HHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK-ICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
..+.+.+.++..+++|..+.+.+.+ .+.|+||++||++++.. .|.. +...+.++||.|+++|+||+|.|......
T Consensus 132 ~~~~~~~~i~~~~~~l~~~~~~~~~-~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~-- 207 (405)
T 3fnb_A 132 KIPLKSIEVPFEGELLPGYAIISED-KAQDTLIVVGGGDTSRE-DLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLH-- 207 (405)
T ss_dssp SCCCEEEEEEETTEEEEEEEECCSS-SCCCEEEEECCSSCCHH-HHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCC--
T ss_pred CCCcEEEEEeECCeEEEEEEEcCCC-CCCCEEEEECCCCCCHH-HHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCC--
Confidence 3445667777643388887775543 44599999999988776 5544 34356678999999999999999643221
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
...++.+|+.++++++.... .+++|+|||+||.+++.++..+| + |+++|+++|....... ........
T Consensus 208 ~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~-v~~~v~~~p~~~~~~~------~~~~~~~~ 275 (405)
T 3fnb_A 208 FEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-R-IKAWIASTPIYDVAEV------FRISFSTA 275 (405)
T ss_dssp CCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-T-CCEEEEESCCSCHHHH------HHHHCC--
T ss_pred CCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-C-eEEEEEecCcCCHHHH------HHHhhhhh
Confidence 22355788999999988642 48999999999999999999998 5 9999999987653110 00000000
Q ss_pred hhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHh--cCCCCCcCEEEEeeCCCcccC
Q 020633 186 FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD--NFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~i~g~~D~~~~ 263 (323)
... +............ ................+.... ............. .+.++++|+|+|+|++|.+++
T Consensus 276 ~~~-p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~ 348 (405)
T 3fnb_A 276 LKA-PKTILKWGSKLVT--SVNKVAEVNLNKYAWQFGQVD----FITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSEL 348 (405)
T ss_dssp -------------------CCCHHHHHHHHHHHHHHTSSS----HHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHH
T ss_pred hhC-cHHHHHHHHHHhh--ccchhHHHHHHHhhhhcCCCC----HHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCC
Confidence 000 0000000000000 000000000000000000000 0111111111111 267889999999999999999
Q ss_pred chhHHHHHHHcC--CCCccEEEec---CCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 264 PTSSKLLYEKAS--SADKSIKIYD---GMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 264 ~~~~~~~~~~~~--~~~~~~~~~~---~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++.++.+.+.+. +.++++++++ ++||... .+..+.+.+.|.+||++++..
T Consensus 349 ~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~----~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 349 MRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQ----VNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGG----GGGHHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHhccCCCCceEEEEcCCccchhccc----cchHHHHHHHHHHHHHHHhCc
Confidence 999999998884 3457899994 4555555 345667999999999998853
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=195.78 Aligned_cols=227 Identities=16% Similarity=0.158 Sum_probs=149.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.++++|||+||++++.. .|..+++.|++. |.|+++|+||||.|..... ..+++++++|+.++++.+. ..++
T Consensus 18 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~l~~~~------~~~~ 88 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-FFFPLAKALAPA-VEVLAVQYPGRQDRRHEPP-VDSIGGLTNRLLEVLRPFG------DRPL 88 (267)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHHTTT-EEEEEECCTTSGGGTTSCC-CCSHHHHHHHHHHHTGGGT------TSCE
T ss_pred CCCceEEEeCCCCCCch-hHHHHHHHhccC-cEEEEecCCCCCCCCCCCC-CcCHHHHHHHHHHHHHhcC------CCce
Confidence 56899999999998877 899999999766 9999999999999976443 3589999999999998874 3489
Q ss_pred EEEEechhHHHHHHHhhhcCCCc---eeEEEEccCcccCCCCCchh--hHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 133 FLFGESMGGAATMLMYFQSEPNT---WTGLIFSAPLFVIPENMKPS--KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~---v~~~vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+|+|||+||.+|+.++.++|++. +++++++++........... .........+...... ......+
T Consensus 89 ~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 159 (267)
T 3fla_A 89 ALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGS---------DAAMLAD 159 (267)
T ss_dssp EEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHH---------HHHHHHS
T ss_pred EEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCc---------chhhccC
Confidence 99999999999999999999742 89999988764322211000 0000000000000000 0000000
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH-hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC-ccEEEec
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ-DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD-KSIKIYD 285 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~ 285 (323)
........ .............. .....+++|+++++|++|.+++.+..+.+.+.+ ++ +++++++
T Consensus 160 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~ 225 (267)
T 3fla_A 160 PELLAMVL------------PAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHT--TGPADLRVLP 225 (267)
T ss_dssp HHHHHHHH------------HHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGB--SSCEEEEEES
T ss_pred HHHHHHHH------------HHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhc--CCCceEEEec
Confidence 00000000 00000001111000 112578999999999999999999888888887 44 8999999
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 286 GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ ||+.++++ .+++.+.|.+||++...
T Consensus 226 g-gH~~~~~~----~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 226 G-GHFFLVDQ----AAPMIATMTEKLAGPAL 251 (267)
T ss_dssp S-STTHHHHT----HHHHHHHHHHHTC----
T ss_pred C-CceeeccC----HHHHHHHHHHHhccccc
Confidence 8 99999544 55699999999987653
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=201.72 Aligned_cols=235 Identities=14% Similarity=0.085 Sum_probs=144.7
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
+.+++|||+||++++.. .|..+++.|+++ ||+|+++|+||||.|..... .+++++++++.++++.+ . .
T Consensus 34 ~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~l~~~~~~~-~------~ 103 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAVVPIMAKA-P------Q 103 (302)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHHHHHHHHC-T------T
T ss_pred CCCCeEEEECCCCCChh-HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH--HHHHHHHHHHHHHhhcC-C------C
Confidence 45789999999998887 899999999988 89999999999999875432 25666777777776665 2 2
Q ss_pred CeEEEEechhHHHHHHHhhhcCC-CceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCC-cc-cccccccCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEP-NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMP-DN-KMVGKAIKD 207 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 207 (323)
+++++||||||.+++.++.++|+ + |+++|++++......... ..........+........... .. ........+
T Consensus 104 ~~~lvGhS~Gg~ia~~~a~~~p~~~-v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (302)
T 1pja_A 104 GVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDT-DYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHD 181 (302)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCC-EEEEEEESCCTTCBCSCC-HHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCC
T ss_pred cEEEEEECHHHHHHHHHHHhcCccc-cCEEEEECCCcccccccc-hhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccC
Confidence 89999999999999999999998 6 999999998654322110 1110000000000000000000 00 000000011
Q ss_pred hH-HHHHHhcCCC--CcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC---------
Q 020633 208 PE-KLKVIASNPR--RYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--------- 275 (323)
Q Consensus 208 ~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--------- 275 (323)
+. .......... ......... ...+....+.+++ |+++|+|++|.++|++.++.+.+...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 1pja_A 182 PHHDDLYLNASSFLALINGERDHP-------NATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEE 253 (302)
T ss_dssp TTCHHHHHHHCSSHHHHTTSSCCT-------THHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGG
T ss_pred hhhhhhhhccchHHHHhhcCCccc-------cchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhh
Confidence 10 0111100000 000000000 0011345567889 99999999999999888776644331
Q ss_pred ----------------CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 276 ----------------SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 276 ----------------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
..++++++++++||+.+.++|+. +.+.|.+||
T Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl 301 (302)
T 1pja_A 254 QLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTL----YETCIEPWL 301 (302)
T ss_dssp SHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHH----HHHHTGGGC
T ss_pred hhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHH----HHHHHHHhc
Confidence 12289999999999999766554 888888776
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=188.88 Aligned_cols=203 Identities=14% Similarity=0.068 Sum_probs=153.2
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 106 (323)
+...+...+| .+.+..|.|.+ +++|+|||+||++ ++.. .|..+++.|+++||.|+++|+||++.. +
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~-~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~~~~~--------~ 108 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG-TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPEV--------R 108 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS-SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTTS--------C
T ss_pred CccccccCCCCCceEEEEccCC-CCCCEEEEEcCcccccCChH-HHHHHHHHHHhCCCEEEEeCCCCCCCC--------C
Confidence 4456666777 88888888876 6789999999954 4445 778888999999999999999998642 6
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc------CCCceeEEEEccCcccCCCCCchhhHHHH
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS------EPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~v~~~vl~~~~~~~~~~~~~~~~~~~ 180 (323)
+...++|+.++++++..... .+++|+||||||.+++.++..+ +++ ++++|+++|..........
T Consensus 109 ~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~-v~~~vl~~~~~~~~~~~~~------ 178 (262)
T 2pbl_A 109 ISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGAR-IRNVVPISPLSDLRPLLRT------ 178 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTT-EEEEEEESCCCCCGGGGGS------
T ss_pred hHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhcccccccccccc-ceEEEEecCccCchHHHhh------
Confidence 88899999999999987632 4899999999999999999987 777 9999999987653211000
Q ss_pred HhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc
Q 020633 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
..... . ..... ..... .....+.++++|+++++|++|.
T Consensus 179 -------~~~~~--------~---~~~~~--~~~~~----------------------~~~~~~~~~~~P~lii~G~~D~ 216 (262)
T 2pbl_A 179 -------SMNEK--------F---KMDAD--AAIAE----------------------SPVEMQNRYDAKVTVWVGGAER 216 (262)
T ss_dssp -------TTHHH--------H---CCCHH--HHHHT----------------------CGGGCCCCCSCEEEEEEETTSC
T ss_pred -------hhhhh--------h---CCCHH--HHHhc----------------------CcccccCCCCCCEEEEEeCCCC
Confidence 00000 0 00000 00000 0123456789999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCch
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
+++.+.++.+.+.+ + +++++++++||+.++++++.
T Consensus 217 ~~~~~~~~~~~~~~--~-~~~~~~~~~~H~~~~~~~~~ 251 (262)
T 2pbl_A 217 PAFLDQAIWLVEAW--D-ADHVIAFEKHHFNVIEPLAD 251 (262)
T ss_dssp HHHHHHHHHHHHHH--T-CEEEEETTCCTTTTTGGGGC
T ss_pred cccHHHHHHHHHHh--C-CeEEEeCCCCcchHHhhcCC
Confidence 99999999999998 4 89999999999999876655
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=187.08 Aligned_cols=192 Identities=18% Similarity=0.256 Sum_probs=146.9
Q ss_pred cCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEe-------------------cCCCCcCCCCCcccCCChH
Q 020633 48 LPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAA-------------------DLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 48 ~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~-------------------d~~G~G~s~~~~~~~~~~~ 108 (323)
.|...+++|+||++||++++.. .|..+.+.|.+.||.|+++ |++|+ .+.. .....+++
T Consensus 16 ~p~~~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~-~~~~~~~~ 92 (232)
T 1fj2_A 16 VPAARKATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDS-QEDESGIK 92 (232)
T ss_dssp ECCSSCCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTC-CBCHHHHH
T ss_pred cCCCCCCCceEEEEecCCCccc-hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Cccc-ccccHHHH
Confidence 3444467899999999998877 8889999998889999998 66666 2222 22223678
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
+.++++.++++++.. ..++..+++++|||+||.+++.++.++|++ ++++|++++.........
T Consensus 93 ~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~i~~~~~~~~~~~~~--------------- 155 (232)
T 1fj2_A 93 QAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQK-LAGVTALSCWLPLRASFP--------------- 155 (232)
T ss_dssp HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSC-CSEEEEESCCCTTGGGSC---------------
T ss_pred HHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCc-eeEEEEeecCCCCCcccc---------------
Confidence 888999999999865 333346899999999999999999999988 999999998654221000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
. ....+..+++|+++++|++|.+++.+.++
T Consensus 156 ------------------------------~--------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 185 (232)
T 1fj2_A 156 ------------------------------Q--------------------GPIGGANRDISILQCHGDCDPLVPLMFGS 185 (232)
T ss_dssp ------------------------------S--------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHH
T ss_pred ------------------------------c--------------------cccccccCCCCEEEEecCCCccCCHHHHH
Confidence 0 01234567899999999999999999888
Q ss_pred HHHHHcCC----CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 269 LLYEKASS----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 269 ~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.+.+.. +++++++++++||... .+ ..+.+.+||+++++.
T Consensus 186 ~~~~~l~~~~~~~~~~~~~~~~~~H~~~----~~----~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 186 LTVEKLKTLVNPANVTFKTYEGMMHSSC----QQ----EMMDVKQFIDKLLPP 230 (232)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCCSSCC----HH----HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCCCceEEEEeCCCCcccC----HH----HHHHHHHHHHHhcCC
Confidence 88777632 3589999999999985 33 447889999887653
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=197.31 Aligned_cols=193 Identities=15% Similarity=0.182 Sum_probs=145.1
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHH-------HHHHHHhhCCcEEEEecCCCCcCCCCCcccC---------
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KICISFATWGYAVFAADLLGHGRSDGIRCYL--------- 104 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--------- 104 (323)
.+++..+.|.+ .++++|||+||++.+.. .|. .+++.|+++||.|+++|+||||.|.......
T Consensus 49 ~~~~~~~~p~~-~~~~~vvl~HG~g~~~~-~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~ 126 (328)
T 1qlw_A 49 QMYVRYQIPQR-AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAP 126 (328)
T ss_dssp CEEEEEEEETT-CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSC
T ss_pred eEEEEEEccCC-CCCccEEEEeCCCCCCC-ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccC
Confidence 56666666654 35689999999997776 676 4889999999999999999999997543210
Q ss_pred -----------------------------CC-------hHH------------------HhhcHHHHHHHHHhcCCCCCC
Q 020633 105 -----------------------------GD-------MEK------------------VAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 105 -----------------------------~~-------~~~------------------~~~d~~~~l~~l~~~~~~~~~ 130 (323)
.. +++ +++++.++++.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-------- 198 (328)
T 1qlw_A 127 ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD-------- 198 (328)
T ss_dssp GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--------
T ss_pred cccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--------
Confidence 00 222 4555666665542
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHH
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
+++++|||+||.+++.+|.++|++ |+++|+++|.....
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~-v~~~v~~~p~~~~~----------------------------------------- 236 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKG-ITAIVSVEPGECPK----------------------------------------- 236 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTT-EEEEEEESCSCCCC-----------------------------------------
T ss_pred CceEEEECcccHHHHHHHHhChhh-eeEEEEeCCCCCCC-----------------------------------------
Confidence 799999999999999999999998 99999999753000
Q ss_pred HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc-----hhHHHHHHHcC--CCCccEEE
Q 020633 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP-----TSSKLLYEKAS--SADKSIKI 283 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~--~~~~~~~~ 283 (323)
.......+++|+|+++|++|.++|. +.++.+.+.+. +.++++++
T Consensus 237 -----------------------------~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~ 287 (328)
T 1qlw_A 237 -----------------------------PEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMS 287 (328)
T ss_dssp -----------------------------GGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -----------------------------HHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEE
Confidence 0111123478999999999999996 88888888773 13689999
Q ss_pred ecCCC-----cccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 284 YDGMY-----HSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 284 ~~~~g-----H~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++++| |+.+.+. ..+++.+.|.+||++++.+
T Consensus 288 ~~~~gi~G~~H~~~~~~---~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 288 LPALGVHGNSHMMMQDR---NNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp GGGGTCCCCCTTGGGST---THHHHHHHHHHHHHHTCC-
T ss_pred cCCCCcCCCcccchhcc---CHHHHHHHHHHHHHhcccC
Confidence 99666 9998544 2566999999999988653
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=191.74 Aligned_cols=191 Identities=19% Similarity=0.218 Sum_probs=150.0
Q ss_pred CCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHH
Q 020633 38 PNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSF 117 (323)
Q Consensus 38 ~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 117 (323)
.+|...+..+.|....+.|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|.. ...+|+...
T Consensus 79 ~~g~~~~~~~~p~~~~~~p~vv~~HG~~~~~~-~~~~~~~~la~~G~~vv~~d~~g~g~s~~---------~~~~d~~~~ 148 (306)
T 3vis_A 79 ADGFGGGTIYYPRENNTYGAIAISPGYTGTQS-SIAWLGERIASHGFVVIAIDTNTTLDQPD---------SRARQLNAA 148 (306)
T ss_dssp CSSSCCEEEEEESSCSCEEEEEEECCTTCCHH-HHHHHHHHHHTTTEEEEEECCSSTTCCHH---------HHHHHHHHH
T ss_pred cCCCcceEEEeeCCCCCCCEEEEeCCCcCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCcc---------hHHHHHHHH
Confidence 45522233444444346899999999998877 88999999999999999999999998742 233566677
Q ss_pred HHHHHhc------CCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 118 FKHVRDS------EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 118 l~~l~~~------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
++++... ...+..+++++|||+||.+++.++..+|+ ++++|+++|...
T Consensus 149 ~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~--v~~~v~~~~~~~------------------------ 202 (306)
T 3vis_A 149 LDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD--LKAAIPLTPWHL------------------------ 202 (306)
T ss_dssp HHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCS------------------------
T ss_pred HHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC--eeEEEEeccccC------------------------
Confidence 7776664 33335689999999999999999999987 999999987542
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCch-hHHHH
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPT-SSKLL 270 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~ 270 (323)
...+.++++|+++++|++|.+++.+ ..+.+
T Consensus 203 -------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~ 233 (306)
T 3vis_A 203 -------------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPF 233 (306)
T ss_dssp -------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHH
T ss_pred -------------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHH
Confidence 1234567899999999999999998 68999
Q ss_pred HHHcCCC-CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 271 YEKASSA-DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 271 ~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.+... .+++++++++||..+.+.+++ +.+.+.+||++++..
T Consensus 234 ~~~l~~~~~~~~~~~~g~gH~~~~~~~~~----~~~~i~~fl~~~l~~ 277 (306)
T 3vis_A 234 YNSIPSPTDKAYLELDGASHFAPNITNKT----IGMYSVAWLKRFVDE 277 (306)
T ss_dssp HHTCCTTSCEEEEEETTCCTTGGGSCCHH----HHHHHHHHHHHHHSC
T ss_pred HHHhccCCCceEEEECCCCccchhhchhH----HHHHHHHHHHHHccC
Confidence 9988532 577999999999999766644 888999999988753
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=174.28 Aligned_cols=173 Identities=14% Similarity=0.168 Sum_probs=135.6
Q ss_pred CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
+++|+||++||++++.. +.+..+.+.|.++||.|+++|+||+|.|.... ...++.+.++++.+.++.... ..+
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~ 75 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLG-QLGDVRGRLQRLLEIARAATE-----KGP 75 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGC-TTCCHHHHHHHHHHHHHHHHT-----TSC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCC-----CCC
Confidence 45789999999997654 23448899999999999999999999987433 223566666666666665542 348
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++|||+||.+++.++.++| ++++|+++|.......
T Consensus 76 ~~l~G~S~Gg~~a~~~a~~~~---~~~~v~~~~~~~~~~~---------------------------------------- 112 (176)
T 2qjw_A 76 VVLAGSSLGSYIAAQVSLQVP---TRALFLMVPPTKMGPL---------------------------------------- 112 (176)
T ss_dssp EEEEEETHHHHHHHHHHTTSC---CSEEEEESCCSCBTTB----------------------------------------
T ss_pred EEEEEECHHHHHHHHHHHhcC---hhheEEECCcCCcccc----------------------------------------
Confidence 999999999999999999887 8999999987543210
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
..+..+++|+++++|++|.++|.+.++.+.+.+ +++++++ ++||.+
T Consensus 113 ------------------------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~-~~~H~~ 158 (176)
T 2qjw_A 113 ------------------------------PALDAAAVPISIVHAWHDELIPAADVIAWAQAR---SARLLLV-DDGHRL 158 (176)
T ss_dssp ------------------------------CCCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEE-SSCTTC
T ss_pred ------------------------------CcccccCCCEEEEEcCCCCccCHHHHHHHHHhC---CceEEEe-CCCccc
Confidence 004567899999999999999999999998887 5788889 899997
Q ss_pred ccCCCchhHHHHHHHHHHHHHH
Q 020633 292 IQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
. +..+++.+.+.+||++
T Consensus 159 ~-----~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 159 G-----AHVQAASRAFAELLQS 175 (176)
T ss_dssp T-----TCHHHHHHHHHHHHHT
T ss_pred c-----ccHHHHHHHHHHHHHh
Confidence 4 3356688999999864
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=197.81 Aligned_cols=250 Identities=12% Similarity=-0.013 Sum_probs=157.1
Q ss_pred EEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 34 YFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 34 ~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
.+...+|.+.+..+.|.+.++.|+||++||++++. +..++..|+++||.|+++|+||+|.+...... ...+|
T Consensus 137 ~~~~~~~~l~~~l~~P~~~~~~P~Vv~~hG~~~~~---~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~-----~~~~d 208 (422)
T 3k2i_A 137 RQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGL---LEYRASLLAGHGFATLALAYYNFEDLPNNMDN-----ISLEY 208 (422)
T ss_dssp EEEEEETTEEEEEEECSSSCCBCEEEEECCTTCSC---CCHHHHHHHTTTCEEEEEECSSSTTSCSSCSC-----EETHH
T ss_pred EEEEeCCcEEEEEEcCCCCCCcCEEEEEcCCCcch---hHHHHHHHHhCCCEEEEEccCCCCCCCCCccc-----CCHHH
Confidence 34444558999999987656789999999998753 33458889999999999999999987644322 12567
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+.++++++.....++..+++|+||||||.+|+.+|..+|+ ++++|++++............ ....+...
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~--v~a~V~~~~~~~~~~~~~~~~---------~~~~~~~~ 277 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN--VSATVSINGSGISGNTAINYK---------HSSIPPLG 277 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS--EEEEEEESCCSBCCSSCEEET---------TEEECCCC
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC--ccEEEEEcCcccccCCchhhc---------CCcCCCcc
Confidence 7778888877654456799999999999999999999987 999999887754322110000 00000000
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH-HHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS-KLLYE 272 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~ 272 (323)
......... ... .......+.. ..... .......+.++++|+|+|+|++|.++|.+.. +.+.+
T Consensus 278 ~~~~~~~~~---~~~-----~~~~~~~~~~-~~~~~-------~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~ 341 (422)
T 3k2i_A 278 YDLRRIKVA---FSG-----LVDIVDIRNA-LVGGY-------KNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSE 341 (422)
T ss_dssp BCGGGCEEC---TTS-----CEECTTCBCC-CTTGG-------GSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred cchhhcccC---cch-----hHHHHHHHhh-hhhcc-------cccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHH
Confidence 000000000 000 0000000000 00000 0001223567899999999999999998754 45555
Q ss_pred HcC---CCCccEEEecCCCcccccCC------------------------CchhHHHHHHHHHHHHHHHHhhc
Q 020633 273 KAS---SADKSIKIYDGMYHSLIQGE------------------------PDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 273 ~~~---~~~~~~~~~~~~gH~~~~~~------------------------~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
.+. .+++++++++++||.+.... ..+..+++++.+.+||++++...
T Consensus 342 ~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 342 RLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp HHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 542 23378999999999983110 12457779999999999998654
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-27 Score=194.65 Aligned_cols=246 Identities=15% Similarity=0.102 Sum_probs=159.1
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
..+.+...++. +| +|.++.+.|.+.++.|+||++||++++....+..+...|+++||.|+++|+||+|.|...... .
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~-~ 242 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLT-E 242 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCC-S
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCC-C
Confidence 34556677777 55 999999988765678999999999988554677778888889999999999999999764322 2
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+.... .+++++.....++..+++++|||+||.+++.++..+|++ |+++|+++|........ ..+ ........
T Consensus 243 ~~~~~~~---~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~-v~~~v~~~~~~~~~~~~-~~~-~~~~~~~~ 316 (415)
T 3mve_A 243 DYSRLHQ---AVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEK-IKACVILGAPIHDIFAS-PQK-LQQMPKMY 316 (415)
T ss_dssp CTTHHHH---HHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-CCEEEEESCCCSHHHHC-HHH-HTTSCHHH
T ss_pred CHHHHHH---HHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcc-eeEEEEECCcccccccc-HHH-HHHhHHHH
Confidence 4455444 445555444323356899999999999999999999988 99999999874210000 000 00000000
Q ss_pred hhhhcccccCCcccccccccCCh-HHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhc--CCCCCcCEEEEeeCCCccc
Q 020633 186 FGLADTWAAMPDNKMVGKAIKDP-EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN--FSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~g~~D~~~ 262 (323)
...... ......... ........... . .... ..++++|+|+++|++|.++
T Consensus 317 ~~~~~~--------~~g~~~~~~~~~~~~~~~~~~--~-----------------~~~~~~~~~i~~PvLii~G~~D~~v 369 (415)
T 3mve_A 317 LDVLAS--------RLGKSVVDIYSLSGQMAAWSL--K-----------------VQGFLSSRKTKVPILAMSLEGDPVS 369 (415)
T ss_dssp HHHHHH--------HTTCSSBCHHHHHHHGGGGCT--T-----------------TTTTTTSSCBSSCEEEEEETTCSSS
T ss_pred HHHHHH--------HhCCCccCHHHHHHHHhhcCc--c-----------------cccccccCCCCCCEEEEEeCCCCCC
Confidence 000000 000000000 00000000000 0 0001 3578999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|.+.++.+.+.. ++++++++++..+ + ...+++.+.+.+||++++.
T Consensus 370 p~~~~~~l~~~~--~~~~l~~i~g~~~--h-----~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 370 PYSDNQMVAFFS--TYGKAKKISSKTI--T-----QGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp CHHHHHHHHHTB--TTCEEEEECCCSH--H-----HHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhC--CCceEEEecCCCc--c-----cchHHHHHHHHHHHHHHhc
Confidence 999999888866 7899999998322 1 1345688999999998874
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=198.97 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=101.3
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhh------CCcEEEEecCCCCcCCCCCc-ccC
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFAT------WGYAVFAADLLGHGRSDGIR-CYL 104 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~------~g~~v~~~d~~G~G~s~~~~-~~~ 104 (323)
.+....+| +|+|...++.. ...++|||+||++++.. .|..++..|.+ .||+|+++|+||||.|+... ...
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~-~~~~pllllHG~~~s~~-~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~ 164 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSER-EDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKD 164 (408)
T ss_dssp EEEEEETTEEEEEEEECCSC-TTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSC
T ss_pred CEEEEECCEEEEEEEecCCC-CCCCeEEEECCCCCcHH-HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCC
Confidence 34445588 99999998754 45789999999998877 89999999987 58999999999999998764 345
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
.+++.+++++.++++.++.+ .+++++||||||.+++.+|.++|+ +.++++..+
T Consensus 165 ~~~~~~a~~~~~l~~~lg~~-----~~~~lvG~S~Gg~ia~~~A~~~p~--~~~~~l~~~ 217 (408)
T 3g02_A 165 FGLMDNARVVDQLMKDLGFG-----SGYIIQGGDIGSFVGRLLGVGFDA--CKAVHLNFC 217 (408)
T ss_dssp CCHHHHHHHHHHHHHHTTCT-----TCEEEEECTHHHHHHHHHHHHCTT--EEEEEESCC
T ss_pred CCHHHHHHHHHHHHHHhCCC-----CCEEEeCCCchHHHHHHHHHhCCC--ceEEEEeCC
Confidence 68999999999999987632 279999999999999999999966 556655443
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-28 Score=190.70 Aligned_cols=232 Identities=10% Similarity=0.021 Sum_probs=157.2
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCC------CCcceEEEEecCCC--CCccccHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLD------QKVKATVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~------~~~~~~vv~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
..+.+.+.+...+| .+.+..| |.. .++.|+||++||++ +.....|..++..|+++||.|+++|+||+|.+
T Consensus 16 ~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~ 94 (283)
T 3bjr_A 16 YFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQ 94 (283)
T ss_dssp -CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTC
T ss_pred CCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCcc
Confidence 45567788888888 8888888 543 25689999999954 23333688899999999999999999999887
Q ss_pred CCCcccCCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhcCCC------------ceeEEEEc
Q 020633 98 DGIRCYLGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQSEPN------------TWTGLIFS 162 (323)
Q Consensus 98 ~~~~~~~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~------------~v~~~vl~ 162 (323)
. ........|+.++++++.... .++..+++|+|||+||.+|+.++..+|++ .++++|++
T Consensus 95 ~------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (283)
T 3bjr_A 95 Q------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLG 168 (283)
T ss_dssp S------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEE
T ss_pred c------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEc
Confidence 3 122344566666666665421 12234899999999999999999998852 27899999
Q ss_pred cCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHh
Q 020633 163 APLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
+|............ ..+ ..+.. ... . .....
T Consensus 169 ~p~~~~~~~~~~~~-------------~~~-----~~~~~-----------------~~~---~-----------~~~~~ 199 (283)
T 3bjr_A 169 YPVISPLLGFPKDD-------------ATL-----ATWTP-----------------TPN---E-----------LAADQ 199 (283)
T ss_dssp SCCCCTTSBC--------------------------CCCC-----------------CGG---G-----------GCGGG
T ss_pred CCcccccccccccc-------------chH-----HHHHH-----------------HhH---h-----------cCHHH
Confidence 88765322110000 000 00000 000 0 00123
Q ss_pred cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCc---------hhHHHHHHHHHHHH
Q 020633 243 NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPD---------ENANLVLKDMREWI 311 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~---------~~~~~~~~~i~~fl 311 (323)
.+.++.+|+|+++|++|.++|++.++.+.+.+. +.++++++++++||.+..+.+. ...+++.+.+.+||
T Consensus 200 ~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl 279 (283)
T 3bjr_A 200 HVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWL 279 (283)
T ss_dssp SCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHH
T ss_pred hccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHH
Confidence 456778999999999999999999999888874 2346899999999977754331 12356888999999
Q ss_pred HHH
Q 020633 312 DER 314 (323)
Q Consensus 312 ~~~ 314 (323)
+++
T Consensus 280 ~~~ 282 (283)
T 3bjr_A 280 ADN 282 (283)
T ss_dssp HHT
T ss_pred hhc
Confidence 764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-28 Score=208.44 Aligned_cols=240 Identities=14% Similarity=0.096 Sum_probs=170.2
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCC--ccccHHHHHHHHhhCCcEEEEecCCC---CcCCCCCc
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSD--TGWMFQKICISFATWGYAVFAADLLG---HGRSDGIR 101 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~ 101 (323)
+.+...+...+| ++++..+.|.+. .+.|+||++||++.. .. .|..+++.|+++||.|+++|+|| +|.+....
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~ 410 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSD-SWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 410 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCS-SCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred cceEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCccccccc-ccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhh
Confidence 456778888899 999999998742 368999999998755 34 67888999999999999999999 66553221
Q ss_pred ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 102 CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
..........+|+.++++++......+ +++|+|||+||.+++.++.++|++ ++++|+++|.......... .
T Consensus 411 ~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~~~------~ 481 (582)
T 3o4h_A 411 IIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGL-FKAGVAGASVVDWEEMYEL------S 481 (582)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTT-SSCEEEESCCCCHHHHHHT------C
T ss_pred hhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCc-eEEEEEcCCccCHHHHhhc------c
Confidence 111133455788999999988764322 899999999999999999999999 9999999986542100000 0
Q ss_pred hhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
......+.... .. ... ....... ....+.++++|+|+++|++|..
T Consensus 482 ~~~~~~~~~~~--------~~---~~~--~~~~~~s----------------------p~~~~~~i~~P~lii~G~~D~~ 526 (582)
T 3o4h_A 482 DAAFRNFIEQL--------TG---GSR--EIMRSRS----------------------PINHVDRIKEPLALIHPQNASR 526 (582)
T ss_dssp CHHHHHHHHHH--------TT---TCH--HHHHHTC----------------------GGGGGGGCCSCEEEEEETTCSS
T ss_pred cchhHHHHHHH--------cC---cCH--HHHHhcC----------------------HHHHHhcCCCCEEEEecCCCCC
Confidence 00000000000 00 000 0000000 1244667889999999999999
Q ss_pred cCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 262 TCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 262 ~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|++.++.+++.+. +.++++++++++||.+. ..+..+++.+.+.+||+++++
T Consensus 527 v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~---~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 527 TPLKPLLRLMGELLARGKTFEAHIIPDAGHAIN---TMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---BHHHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCC---ChHHHHHHHHHHHHHHHHHcC
Confidence 99999999988874 23478999999999987 245677899999999999875
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-27 Score=189.74 Aligned_cols=245 Identities=16% Similarity=0.135 Sum_probs=164.8
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC--cc
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--RC 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~~ 102 (323)
.+..+++.+...+| +|.++.+.|.+ .++.|+||++||++++.. .+ .....|+++||.|+++|+||+|.|... ..
T Consensus 65 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~-~~-~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~ 142 (337)
T 1vlq_A 65 TVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FP-HDWLFWPSMGYICFVMDTRGQGSGWLKGDTP 142 (337)
T ss_dssp SEEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CG-GGGCHHHHTTCEEEEECCTTCCCSSSCCCCC
T ss_pred CeEEEEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCC-Cc-hhhcchhhCCCEEEEecCCCCCCcccCCCCc
Confidence 44567788888889 99999998875 466799999999987754 33 234466788999999999999976432 00
Q ss_pred c----------------------CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE
Q 020633 103 Y----------------------LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 103 ~----------------------~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v 160 (323)
. .+.+...++|+.++++++.....++..+++++|||+||.+++.++..+|. ++++|
T Consensus 143 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~--v~~~v 220 (337)
T 1vlq_A 143 DYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK--AKALL 220 (337)
T ss_dssp BCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS--CCEEE
T ss_pred ccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCC--ccEEE
Confidence 0 11234778999999999987654445689999999999999999999884 99999
Q ss_pred EccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH
Q 020633 161 FSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240 (323)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
+.+|...... ..... ... . ........+...+. ............ +.
T Consensus 221 l~~p~~~~~~---------~~~~~----~~~------~-------~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~ 267 (337)
T 1vlq_A 221 CDVPFLCHFR---------RAVQL----VDT------H-------PYAEITNFLKTHRD------KEEIVFRTLSYF-DG 267 (337)
T ss_dssp EESCCSCCHH---------HHHHH----CCC------T-------THHHHHHHHHHCTT------CHHHHHHHHHTT-CH
T ss_pred ECCCcccCHH---------HHHhc----CCC------c-------chHHHHHHHHhCch------hHHHHHHhhhhc-cH
Confidence 9888543210 00000 000 0 00000111111110 000000000000 01
Q ss_pred HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
...+.++++|+|+++|++|.++|++.+..+++.+.. ++++++++++||... ..+..+.+.+||.+.++
T Consensus 268 ~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~~~~gH~~~-------~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 268 VNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGG-------GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp HHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTT-------HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEcCCCCCCCc-------chhhHHHHHHHHHHHHh
Confidence 234467789999999999999999999999999853 488999999999964 12366888888888764
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=189.13 Aligned_cols=222 Identities=15% Similarity=0.116 Sum_probs=141.1
Q ss_pred eEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEE
Q 020633 56 ATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLF 135 (323)
Q Consensus 56 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 135 (323)
++|||+||++++.. .|..+++.|.+ ||+|+++|+||||.|..... ..+++++++++.++++.+.. ..+++|+
T Consensus 52 ~~lvllHG~~~~~~-~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~~~~-----~~~~~lv 123 (280)
T 3qmv_A 52 LRLVCFPYAGGTVS-AFRGWQERLGD-EVAVVPVQLPGRGLRLRERP-YDTMEPLAEAVADALEEHRL-----THDYALF 123 (280)
T ss_dssp EEEEEECCTTCCGG-GGTTHHHHHCT-TEEEEECCCTTSGGGTTSCC-CCSHHHHHHHHHHHHHHTTC-----SSSEEEE
T ss_pred ceEEEECCCCCChH-HHHHHHHhcCC-CceEEEEeCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCC-----CCCEEEE
Confidence 89999999998877 89999999987 89999999999999976543 35899999999999998732 3489999
Q ss_pred EechhHHHHHHHhhhcCCCcee----EEEEccCcccCCCCCch--hhHHHHHhhhhhhhhcccccCCcccccccccCChH
Q 020633 136 GESMGGAATMLMYFQSEPNTWT----GLIFSAPLFVIPENMKP--SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 136 G~S~Gg~~a~~~a~~~p~~~v~----~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (323)
||||||.+|+.+|.++|++ +. .++++++.......... ......+...+..+.. .... ..
T Consensus 124 G~S~Gg~va~~~a~~~p~~-~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~-------- 189 (280)
T 3qmv_A 124 GHSMGALLAYEVACVLRRR-GAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGG----LDDA-DT-------- 189 (280)
T ss_dssp EETHHHHHHHHHHHHHHHT-TCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTC----CC-------------
T ss_pred EeCHhHHHHHHHHHHHHHc-CCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCC----CChh-hh--------
Confidence 9999999999999998876 55 77776653321111000 0001111111111000 0000 00
Q ss_pred HHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCC
Q 020633 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
.... .. ................. ...+.++++|+++|+|++|.+++.+..+.+.+.+. ...++++++ +|
T Consensus 190 ------~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-gg 259 (280)
T 3qmv_A 190 ------LGAA-YF-DRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT-GSFLRRHLP-GN 259 (280)
T ss_dssp ------------C-CTTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS-SCEEEEEEE-EE
T ss_pred ------cCHH-HH-HHHHHHHHHHHHHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcC-CceEEEEec-CC
Confidence 0000 00 00011111111111100 11246789999999999999999988888877772 235677777 49
Q ss_pred cccccCCCchhHHHHHHHHHHHH
Q 020633 289 HSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl 311 (323)
|+.+++ ++..+++.+.|.+||
T Consensus 260 H~~~~~--~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 260 HFFLNG--GPSRDRLLAHLGTEL 280 (280)
T ss_dssp TTGGGS--SHHHHHHHHHHHTTC
T ss_pred CeEEcC--chhHHHHHHHHHhhC
Confidence 999952 244566888777764
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=175.63 Aligned_cols=169 Identities=14% Similarity=0.124 Sum_probs=134.0
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCc---EEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGY---AVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~---~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
+|+|||+||++++.. .|..+++.|.++|| .|+++|+||+|.|.. .+.+++++++.++++.+. ..+
T Consensus 3 ~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~-----~~~~~~~~~~~~~~~~~~------~~~ 70 (181)
T 1isp_A 3 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-----NNGPVLSRFVQKVLDETG------AKK 70 (181)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH-----HHHHHHHHHHHHHHHHHC------CSC
T ss_pred CCeEEEECCcCCCHh-HHHHHHHHHHHcCCCCccEEEEecCCCCCchh-----hhHHHHHHHHHHHHHHcC------CCe
Confidence 689999999998877 89999999999998 699999999998753 256778888888888775 348
Q ss_pred eEEEEechhHHHHHHHhhhc--CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChH
Q 020633 132 GFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (323)
++++||||||.+++.++.++ |++ ++++|++++....... ..+
T Consensus 71 ~~lvG~S~Gg~~a~~~~~~~~~~~~-v~~~v~~~~~~~~~~~--------------------------~~~--------- 114 (181)
T 1isp_A 71 VDIVAHSMGGANTLYYIKNLDGGNK-VANVVTLGGANRLTTG--------------------------KAL--------- 114 (181)
T ss_dssp EEEEEETHHHHHHHHHHHHSSGGGT-EEEEEEESCCGGGTCS--------------------------BCC---------
T ss_pred EEEEEECccHHHHHHHHHhcCCCce-EEEEEEEcCccccccc--------------------------ccC---------
Confidence 99999999999999999987 777 9999999987542210 000
Q ss_pred HHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCc
Q 020633 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 289 (323)
. ......++|+++++|++|.++|++.. .+ ++.++++++++||
T Consensus 115 ------------~-------------------~~~~~~~~p~l~i~G~~D~~v~~~~~-----~~--~~~~~~~~~~~gH 156 (181)
T 1isp_A 115 ------------P-------------------GTDPNQKILYTSIYSSADMIVMNYLS-----RL--DGARNVQIHGVGH 156 (181)
T ss_dssp ------------C-------------------CSCTTCCCEEEEEEETTCSSSCHHHH-----CC--BTSEEEEESSCCT
T ss_pred ------------C-------------------CCCCccCCcEEEEecCCCcccccccc-----cC--CCCcceeeccCch
Confidence 0 00012367999999999999998743 24 7789999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHH
Q 020633 290 SLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 290 ~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+.+++ ++.+.|.+||.+.
T Consensus 157 ~~~~~~~-----~~~~~i~~fl~~~ 176 (181)
T 1isp_A 157 IGLLYSS-----QVNSLIKEGLNGG 176 (181)
T ss_dssp GGGGGCH-----HHHHHHHHHHTTT
T ss_pred HhhccCH-----HHHHHHHHHHhcc
Confidence 9986543 4889999999764
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=183.60 Aligned_cols=248 Identities=14% Similarity=0.109 Sum_probs=154.3
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCccc
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~ 103 (323)
...++..+...+|++.++.|.|.+..+.|+||++||++ ++.. .|..++..|++. ||.|+++|+||+|.+..+
T Consensus 46 ~~~~~~~i~~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~--- 121 (311)
T 2c7b_A 46 AETRDVHIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIE-THDHICRRLSRLSDSVVVSVDYRLAPEYKFP--- 121 (311)
T ss_dssp SEEEEEEEEETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTCEEEEECCCCTTTSCTT---
T ss_pred ceEEEEEecCCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChh-hhHHHHHHHHHhcCCEEEEecCCCCCCCCCC---
Confidence 34566777777778888999887645679999999988 6666 788899999876 999999999999987432
Q ss_pred CCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhH
Q 020633 104 LGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
...+|+.++++++.... +++..+++|+|||+||.+|+.++..++++ .++++|+++|............
T Consensus 122 -----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~- 195 (311)
T 2c7b_A 122 -----TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASL- 195 (311)
T ss_dssp -----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHH-
T ss_pred -----ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCC-
Confidence 23445555555443321 11235899999999999999999876642 2999999999876422111110
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHH---HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK---LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
..... .... . ...... ...+......... .... .....+..+. |+|++
T Consensus 196 -~~~~~----~~~~--------~----~~~~~~~~~~~~~~~~~~~~~~-~~~~----------p~~~~l~~~~-P~lii 246 (311)
T 2c7b_A 196 -VEFGV----AETT--------S----LPIELMVWFGRQYLKRPEEAYD-FKAS----------PLLADLGGLP-PALVV 246 (311)
T ss_dssp -HHHHH----CTTC--------S----SCHHHHHHHHHHHCSSTTGGGS-TTTC----------GGGSCCTTCC-CEEEE
T ss_pred -ccHHH----hccC--------C----CCHHHHHHHHHHhCCCCccccC-cccC----------cccccccCCC-cceEE
Confidence 00000 0000 0 000000 0000000000000 0000 0112344444 99999
Q ss_pred eeCCCcccCchhHHHHHHHc--CCCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHh
Q 020633 255 HGTADGVTCPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|++|.+++.. ..+.+.+ .+.+++++++++++|.+....+ .+..+++.+.+.+||++++.
T Consensus 247 ~G~~D~~~~~~--~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 247 TAEYDPLRDEG--ELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp EETTCTTHHHH--HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EcCCCCchHHH--HHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 99999998633 2222222 2357899999999998863222 35567899999999998864
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=175.97 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=141.0
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEec-------------CCCCcCCCCCcccCCCh
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD-------------LLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d-------------~~G~G~s~~~~~~~~~~ 107 (323)
.+.|....+.+ .+.| ||++||++++.. .|..+++.|. .++.|+++| ++|+|.+.........+
T Consensus 4 ~~~~~~~~~~~-~~~p-vv~lHG~g~~~~-~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 4 MTDYVFKAGRK-DLAP-LLLLHSTGGDEH-QLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp CCCEEEECCCT-TSCC-EEEECCTTCCTT-TTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred cceEEEeCCCC-CCCC-EEEEeCCCCCHH-HHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 44454444432 4567 999999998877 7889999997 679999999 77777654322222245
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
...++++.++++.+.....++..+++|+||||||.+++.++.++|++ ++++|++++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~~---------------- 142 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKIN-FDKIIAFHGMQLEDFE---------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCC-CSEEEEESCCCCCCCC----------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcc-cceEEEECCCCCCccc----------------
Confidence 56667777778777665544457999999999999999999999999 9999999876431110
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
......++|+++++|++|.++|.+.+
T Consensus 143 ------------------------------------------------------~~~~~~~~p~li~~G~~D~~v~~~~~ 168 (209)
T 3og9_A 143 ------------------------------------------------------QTVQLDDKHVFLSYAPNDMIVPQKNF 168 (209)
T ss_dssp ------------------------------------------------------CCCCCTTCEEEEEECTTCSSSCHHHH
T ss_pred ------------------------------------------------------ccccccCCCEEEEcCCCCCccCHHHH
Confidence 01123578999999999999999998
Q ss_pred HHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 268 KLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+.+.. ..+++++++ +||.+. .+ ..+.+.+||+++
T Consensus 169 ~~~~~~l~~~~~~~~~~~~~-~gH~~~----~~----~~~~~~~~l~~~ 208 (209)
T 3og9_A 169 GDLKGDLEDSGCQLEIYESS-LGHQLT----QE----EVLAAKKWLTET 208 (209)
T ss_dssp HHHHHHHHHTTCEEEEEECS-STTSCC----HH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEcC-CCCcCC----HH----HHHHHHHHHHhh
Confidence 888887742 246777787 799886 33 567888998764
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=177.46 Aligned_cols=192 Identities=16% Similarity=0.168 Sum_probs=144.4
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEe--cCCCCcCCCCCc---ccCCChHHHh-
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAA--DLLGHGRSDGIR---CYLGDMEKVA- 111 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~--d~~G~G~s~~~~---~~~~~~~~~~- 111 (323)
+| +++|+..+.. +++|+||++||++++.. .|..+++.|++ ||.|+++ |++|+|.|.... ....+.+.+.
T Consensus 23 ~~~~~~~~~~~~~--~~~~~vv~~HG~~~~~~-~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 98 (226)
T 2h1i_A 23 NAMMKHVFQKGKD--TSKPVLLLLHGTGGNEL-DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIF 98 (226)
T ss_dssp HSSSCEEEECCSC--TTSCEEEEECCTTCCTT-TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHH
T ss_pred CCceeEEecCCCC--CCCcEEEEEecCCCChh-HHHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcChhhHHH
Confidence 55 8887766542 45899999999998877 78899999987 8999999 999999875211 1112444444
Q ss_pred --hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 112 --ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 112 --~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+++.++++.+.....++..+++++|||+||.+++.++..+|++ ++++|+++|......
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~------------------- 158 (226)
T 2h1i_A 99 RTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENA-LKGAVLHHPMVPRRG------------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCSCSS-------------------
T ss_pred HHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhh-hCEEEEeCCCCCcCc-------------------
Confidence 4455566555565544467999999999999999999999988 999999998754211
Q ss_pred cccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
......+++|+++++|++|.+++.+.++.
T Consensus 159 ---------------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~ 187 (226)
T 2h1i_A 159 ---------------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEE 187 (226)
T ss_dssp ---------------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHH
T ss_pred ---------------------------------------------------cccccccCCcEEEEeCCCCCcCCHHHHHH
Confidence 01112347899999999999999999999
Q ss_pred HHHHcCCC--CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 270 LYEKASSA--DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 270 ~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+... ..++ +++++||... .+ ..+.+.+||.+.
T Consensus 188 ~~~~l~~~~~~~~~-~~~~~gH~~~----~~----~~~~~~~~l~~~ 225 (226)
T 2h1i_A 188 LKVLLENANANVTM-HWENRGHQLT----MG----EVEKAKEWYDKA 225 (226)
T ss_dssp HHHHHHTTTCEEEE-EEESSTTSCC----HH----HHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEE-EeCCCCCCCC----HH----HHHHHHHHHHHh
Confidence 98888533 3445 8999999986 33 567788888765
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=175.18 Aligned_cols=182 Identities=19% Similarity=0.225 Sum_probs=139.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhh--CCcEEEEecCC-------------------CCcCCCCCcccCCChHHHh
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFAT--WGYAVFAADLL-------------------GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~--~g~~v~~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 111 (323)
+++|+||++||++++.. .|..+++.|++ .||.|+++|+| |+|.+.. ....++++.+
T Consensus 12 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~--~~~~~~~~~~ 88 (218)
T 1auo_A 12 PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS--ISLEELEVSA 88 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE--ECHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh-hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccc--cchHHHHHHH
Confidence 66899999999998877 78999999988 89999998766 4443321 1223577888
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh-hcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF-QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
+++..+++++.. ..++..+++++|||+||.+++.++. ++|++ ++++|+++|......
T Consensus 89 ~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-~~~~v~~~~~~~~~~-------------------- 146 (218)
T 1auo_A 89 KMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGP-LGGVIALSTYAPTFG-------------------- 146 (218)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSC-CCEEEEESCCCTTCC--------------------
T ss_pred HHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCC-ccEEEEECCCCCCch--------------------
Confidence 999999998864 2333568999999999999999999 99988 999999998754200
Q ss_pred ccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
+ .. .+ ....+++|+++++|++|.++|.+.++.+
T Consensus 147 -~--------~~-----------------~~---------------------~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 179 (218)
T 1auo_A 147 -D--------EL-----------------EL---------------------SASQQRIPALCLHGQYDDVVQNAMGRSA 179 (218)
T ss_dssp -T--------TC-----------------CC---------------------CHHHHTCCEEEEEETTCSSSCHHHHHHH
T ss_pred -h--------hh-----------------hh---------------------hhcccCCCEEEEEeCCCceecHHHHHHH
Confidence 0 00 00 0023578999999999999999999999
Q ss_pred HHHcCCC--CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 271 YEKASSA--DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 271 ~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
.+.+... ++++++++ +||... .+ ..+.+.+||.+++
T Consensus 180 ~~~l~~~g~~~~~~~~~-~gH~~~----~~----~~~~~~~~l~~~l 217 (218)
T 1auo_A 180 FEHLKSRGVTVTWQEYP-MGHEVL----PQ----EIHDIGAWLAARL 217 (218)
T ss_dssp HHHHHTTTCCEEEEEES-CSSSCC----HH----HHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEEEec-CCCccC----HH----HHHHHHHHHHHHh
Confidence 8888422 58899999 999987 33 3567777887765
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=193.18 Aligned_cols=249 Identities=12% Similarity=-0.038 Sum_probs=155.7
Q ss_pred EEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 34 YFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 34 ~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
.+...+|.+.++.+.|.+.++.|+||++||+++... . ..+..|+++||.|+++|+||+|.+...... . ..+|
T Consensus 153 ~~~~~~g~l~~~l~~P~~~~~~P~Vv~lhG~~~~~~-~--~~a~~La~~Gy~Vla~D~rG~~~~~~~~~~---~--~~~d 224 (446)
T 3hlk_A 153 REPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLL-E--YRASLLAGKGFAVMALAYYNYEDLPKTMET---L--HLEY 224 (446)
T ss_dssp EEEEEETTEEEEEEECSSSCCBCEEEEECCSSCSCC-C--HHHHHHHTTTCEEEEECCSSSTTSCSCCSE---E--EHHH
T ss_pred EEEecCCeEEEEEEeCCCCCCCCEEEEECCCCcchh-h--HHHHHHHhCCCEEEEeccCCCCCCCcchhh---C--CHHH
Confidence 344445588999998876567899999999987533 2 347889999999999999999987654322 1 1567
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+.++++++.....++..+++|+||||||.+|+.+|..+|+ ++++|++++............ ....+...
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~--v~a~V~~~~~~~~~~~~~~~~---------~~~~~~~~ 293 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG--ITAAVVINGSVANVGGTLRYK---------GETLPPVG 293 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC--EEEEEEESCCSBCCSSEEEET---------TEEECCCC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC--ceEEEEEcCcccccCCCcccc---------CccCCccc
Confidence 7778888877655556799999999999999999999987 999999988654322110000 00000000
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH-HHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS-KLLYE 272 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~ 272 (323)
........... .. ......+....... .......+.++++|+|+++|++|.++|.+.. +.+.+
T Consensus 294 ~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~--------~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~ 357 (446)
T 3hlk_A 294 VNRNRIKVTKD-GY-------ADIVDVLNSPLEGP--------DQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACK 357 (446)
T ss_dssp BCGGGCEECSS-SC-------EECTTCBCCTTSGG--------GGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHH
T ss_pred cchhccccccc-hH-------HHHHHHHhchhhcc--------ccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHH
Confidence 00000000000 00 00000000000000 0001123567889999999999999998443 55555
Q ss_pred HcC---CCCccEEEecCCCcccccCC------------------------CchhHHHHHHHHHHHHHHHHhh
Q 020633 273 KAS---SADKSIKIYDGMYHSLIQGE------------------------PDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 273 ~~~---~~~~~~~~~~~~gH~~~~~~------------------------~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+. .+++++++++++||.+.... ..+..+++++.+.+||++++..
T Consensus 358 ~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~ 429 (446)
T 3hlk_A 358 RLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGG 429 (446)
T ss_dssp HHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 542 23379999999999983100 1233677999999999999864
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=175.17 Aligned_cols=180 Identities=17% Similarity=0.248 Sum_probs=139.3
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhh--CCcEEEEecCC-------------------CCcCCCCCcccCCChHHHh
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFAT--WGYAVFAADLL-------------------GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~--~g~~v~~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 111 (323)
+++|+||++||++++.. .|..+++.|++ .||.|+++|+| |+|.+... ...++++.+
T Consensus 22 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~--~~~~~~~~~ 98 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI--DEDQLNASA 98 (226)
T ss_dssp TCCEEEEEECCTTCCGG-GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB--CHHHHHHHH
T ss_pred CCCCEEEEEecCCCChH-HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccc--cchhHHHHH
Confidence 56899999999998877 88999999987 89999998776 55543222 223678888
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh-hcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF-QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
+++..+++.+.. ..++..+++++|||+||.+++.++. ++|++ ++++|+++|.......
T Consensus 99 ~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~-~~~~v~~~~~~~~~~~------------------- 157 (226)
T 3cn9_A 99 DQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQP-LGGVLALSTYAPTFDD------------------- 157 (226)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSC-CSEEEEESCCCGGGGG-------------------
T ss_pred HHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccC-cceEEEecCcCCCchh-------------------
Confidence 999999988854 2223458999999999999999999 99998 9999999986532100
Q ss_pred ccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
+ . -....+++|+++++|++|.++|.+.++.+
T Consensus 158 -~------~------------------------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~ 188 (226)
T 3cn9_A 158 -L------A------------------------------------------LDERHKRIPVLHLHGSQDDVVDPALGRAA 188 (226)
T ss_dssp -C------C------------------------------------------CCTGGGGCCEEEEEETTCSSSCHHHHHHH
T ss_pred -h------h------------------------------------------hcccccCCCEEEEecCCCCccCHHHHHHH
Confidence 0 0 00145688999999999999999999998
Q ss_pred HHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 271 YEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 271 ~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
.+.+.. .++++++++ +||.+. .+ ..+.+.+||+++
T Consensus 189 ~~~l~~~g~~~~~~~~~-~gH~~~----~~----~~~~i~~~l~~~ 225 (226)
T 3cn9_A 189 HDALQAQGVEVGWHDYP-MGHEVS----LE----EIHDIGAWLRKR 225 (226)
T ss_dssp HHHHHHTTCCEEEEEES-CCSSCC----HH----HHHHHHHHHHHH
T ss_pred HHHHHHcCCceeEEEec-CCCCcc----hh----hHHHHHHHHHhh
Confidence 888732 258999999 999987 33 456788888765
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=171.60 Aligned_cols=182 Identities=12% Similarity=0.078 Sum_probs=132.9
Q ss_pred ceEEEEecCCCCCccccHHHHH-HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 55 KATVYMTHGYGSDTGWMFQKIC-ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.|+||++||++++....|.... ..|+++||.|+++|+| .|.. .+++++++++.++++.+ . .+++
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~-----~~~~~~~~~~~~~~~~~-~------~~~~ 68 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ-----PRLEDWLDTLSLYQHTL-H------ENTY 68 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS-----CCHHHHHHHHHTTGGGC-C------TTEE
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC-----CCHHHHHHHHHHHHHhc-c------CCEE
Confidence 5679999999987652455555 5687889999999999 2221 16788888888888766 2 2799
Q ss_pred EEEechhHHHHHHHhhhcCC--CceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 134 LFGESMGGAATMLMYFQSEP--NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~--~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++||||||.+++.++.++|+ + ++++|+++|.......... +.. +..
T Consensus 69 l~G~S~Gg~~a~~~a~~~~~~~~-v~~~v~~~~~~~~~~~~~~----------~~~------------~~~--------- 116 (192)
T 1uxo_A 69 LVAHSLGCPAILRFLEHLQLRAA-LGGIILVSGFAKSLPTLQM----------LDE------------FTQ--------- 116 (192)
T ss_dssp EEEETTHHHHHHHHHHTCCCSSC-EEEEEEETCCSSCCTTCGG----------GGG------------GTC---------
T ss_pred EEEeCccHHHHHHHHHHhcccCC-ccEEEEeccCCCccccchh----------hhh------------hhh---------
Confidence 99999999999999999998 7 9999999987543211100 000 000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
.+ .. ...+.++++|+++++|++|.++|.+.++.+.+.+ +.++++++++||..
T Consensus 117 -----~~------~~--------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~ 168 (192)
T 1uxo_A 117 -----GS------FD--------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFL 168 (192)
T ss_dssp -----SC------CC--------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSC
T ss_pred -----cC------CC--------------HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc---CceEEEeCCCcCcc
Confidence 00 00 0123456789999999999999999999988887 57999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHH
Q 020633 292 IQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+.++++.. .++.+.+.+|++
T Consensus 169 ~~~~~~~~-~~~~~~l~~~l~ 188 (192)
T 1uxo_A 169 EDEGFTSL-PIVYDVLTSYFS 188 (192)
T ss_dssp GGGTCSCC-HHHHHHHHHHHH
T ss_pred cccccccH-HHHHHHHHHHHH
Confidence 98877653 235555666654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=182.10 Aligned_cols=181 Identities=17% Similarity=0.194 Sum_probs=136.9
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEe--cCCCCcCCCCCc---ccCCC---hHHHhhcHHHHHHHHHhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAA--DLLGHGRSDGIR---CYLGD---MEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~--d~~G~G~s~~~~---~~~~~---~~~~~~d~~~~l~~l~~~ 124 (323)
+++|+||++||++++.. .|..+++.|++. |.|+++ |++|+|.|.... ....+ +...++|+.++++.+...
T Consensus 60 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN-QFFDFGARLLPQ-ATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 137 (251)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHSTT-SEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh-HHHHHHHhcCCC-ceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 56899999999998877 889999999875 999999 899998775211 11113 344467777777776543
Q ss_pred CCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
.. ..+++|+|||+||.+++.++.++|++ ++++|+++|......
T Consensus 138 ~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~-v~~~v~~~~~~~~~~---------------------------------- 180 (251)
T 2r8b_A 138 YQ--AGPVIGLGFSNGANILANVLIEQPEL-FDAAVLMHPLIPFEP---------------------------------- 180 (251)
T ss_dssp HT--CCSEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCCCCSCC----------------------------------
T ss_pred cC--CCcEEEEEECHHHHHHHHHHHhCCcc-cCeEEEEecCCCccc----------------------------------
Confidence 32 56999999999999999999999998 999999998754221
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEE-E
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK-I 283 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-~ 283 (323)
......+++|+|+++|++|.+++.+.++.+.+.+...+.++. +
T Consensus 181 ------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 224 (251)
T 2r8b_A 181 ------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETV 224 (251)
T ss_dssp ------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEE
T ss_pred ------------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 011234588999999999999999999999988842245554 7
Q ss_pred ecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 284 YDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++++||.++ .+ ..+.+.+||++++.
T Consensus 225 ~~~~gH~~~----~~----~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 225 WHPGGHEIR----SG----EIDAVRGFLAAYGG 249 (251)
T ss_dssp EESSCSSCC----HH----HHHHHHHHHGGGC-
T ss_pred ecCCCCccC----HH----HHHHHHHHHHHhcC
Confidence 788899986 33 35678888877654
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-26 Score=180.29 Aligned_cols=247 Identities=13% Similarity=0.124 Sum_probs=158.7
Q ss_pred CcccceeEEEcCCCcEEEEEecCCC-CCcceEEEEecC---CCCCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCc
Q 020633 27 GVRNGKKYFETPNGKLFTQSFLPLD-QKVKATVYMTHG---YGSDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 27 ~~~~~~~~~~~~~g~l~~~~~~~~~-~~~~~~vv~~HG---~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~ 101 (323)
....++..+...+|++.++.|.|.+ .++.|+||++|| ++++.. .|..++..|+++ ||.|+++|+||+|.+.
T Consensus 45 ~~~~~~~~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~~~~~--- 120 (310)
T 2hm7_A 45 VAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHK--- 120 (310)
T ss_dssp CSEEEEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSC---
T ss_pred cceEEEEEeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChh-HhHHHHHHHHHhcCCEEEEeCCCCCCCCC---
Confidence 4556677788777799999998875 467899999999 556665 788899999876 9999999999998763
Q ss_pred ccCCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhcCC----CceeEEEEccCcccCCCCCch
Q 020633 102 CYLGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ~~~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~vl~~~~~~~~~~~~~ 174 (323)
+....+|+.++++++.... .++..+++|+|||+||.+|+.++.++|+ . ++++|+++|..........
T Consensus 121 -----~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~-v~~~vl~~p~~~~~~~~~~ 194 (310)
T 2hm7_A 121 -----FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPA-LAFQLLIYPSTGYDPAHPP 194 (310)
T ss_dssp -----TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCC-CCCEEEESCCCCCCTTSCC
T ss_pred -----CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCC-ceEEEEEcCCcCCCcccCC
Confidence 3445677777777776542 1224589999999999999999988765 4 9999999998765411111
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHH---HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
.. ... .. .... ....... ..+......... .... ......+..+ .|+
T Consensus 195 ~~-~~~-------~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~---------p~~~~~l~~~-~P~ 244 (310)
T 2hm7_A 195 AS-IEE-------NA-------EGYL----LTGGMMLWFRDQYLNSLEELTH-PWFS---------PVLYPDLSGL-PPA 244 (310)
T ss_dssp HH-HHH-------TS-------SSSS----SCHHHHHHHHHHHCSSGGGGGC-TTTC---------GGGCSCCTTC-CCE
T ss_pred cc-hhh-------cC-------CCCC----CCHHHHHHHHHHhCCCCCccCC-ccCC---------CCcCccccCC-CCE
Confidence 00 000 00 0000 0000000 000000000000 0000 0001123333 399
Q ss_pred EEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCC-CchhHHHHHHHHHHHHHHHH
Q 020633 252 LTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWIDERV 315 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~ 315 (323)
|+++|++|.++ .....+.+.+. +.+++++++++++|.+.... ..+..+++.+.+.+||++++
T Consensus 245 lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 245 YIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp EEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 99999999987 44555655552 24579999999999776322 23456789999999998875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=177.29 Aligned_cols=244 Identities=11% Similarity=0.053 Sum_probs=157.3
Q ss_pred CcccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcc
Q 020633 27 GVRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 27 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~ 102 (323)
.+..++..+...+|++.++.|.|.+.++.|+||++||++ ++.. .|..++..|++. ||.|+++|+||+|.+..
T Consensus 62 ~~~~~~~~i~~~~~~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~--- 137 (323)
T 3ain_A 62 VGKIEDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIE-SYDPLCRAITNSCQCVTISVDYRLAPENKF--- 137 (323)
T ss_dssp CSEEEEEEEECSSSEEEEEEEECSSCSCCCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCT---
T ss_pred ccEEEEEEecCCCCeEEEEEEecCCCCCCcEEEEECCCccccCChH-HHHHHHHHHHHhcCCEEEEecCCCCCCCCC---
Confidence 445566777777778989989887546689999999955 5555 788899999864 89999999999998742
Q ss_pred cCCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhcCCCce---eEEEEccCcccCCCCCchhh
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQSEPNTW---TGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v---~~~vl~~~~~~~~~~~~~~~ 176 (323)
....+|+.++++++.... + +..+++|+|||+||.+|+.++.+++++ + +++|+++|...........
T Consensus 138 -----p~~~~d~~~~~~~l~~~~~~lg-d~~~i~l~G~S~GG~lA~~~a~~~~~~-~~~~~~~vl~~p~~~~~~~~~~~- 209 (323)
T 3ain_A 138 -----PAAVVDSFDALKWVYNNSEKFN-GKYGIAVGGDSAGGNLAAVTAILSKKE-NIKLKYQVLIYPAVSFDLITKSL- 209 (323)
T ss_dssp -----THHHHHHHHHHHHHHHTGGGGT-CTTCEEEEEETHHHHHHHHHHHHHHHT-TCCCSEEEEESCCCSCCSCCHHH-
T ss_pred -----cchHHHHHHHHHHHHHhHHHhC-CCceEEEEecCchHHHHHHHHHHhhhc-CCCceeEEEEeccccCCCCCccH-
Confidence 234566666666665432 1 366899999999999999999988876 5 8999999876543221110
Q ss_pred HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh---cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEE
Q 020633 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA---SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
... ... ..+ .......... ........ .... .....+..+ .|+|+
T Consensus 210 --~~~-------~~~-------~~l----~~~~~~~~~~~~~~~~~~~~~-~~~s----------p~~~~l~~l-~P~li 257 (323)
T 3ain_A 210 --YDN-------GEG-------FFL----TREHIDWFGQQYLRSFADLLD-FRFS----------PILADLNDL-PPALI 257 (323)
T ss_dssp --HHH-------SSS-------SSS----CHHHHHHHHHHHCSSGGGGGC-TTTC----------GGGSCCTTC-CCEEE
T ss_pred --HHh-------ccC-------CCC----CHHHHHHHHHHhCCCCcccCC-cccC----------cccCcccCC-CHHHE
Confidence 000 000 000 0000000000 00000000 0000 001123333 39999
Q ss_pred EeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHh
Q 020633 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|++|.+++ ....+.+.+. +.+++++++++++|.+....+ .+..+++.+.+.+||++++.
T Consensus 258 i~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 258 ITAEHDPLRD--QGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp EEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCccHH--HHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 9999999873 4445555442 346799999999999885444 34567899999999998875
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=172.72 Aligned_cols=184 Identities=8% Similarity=0.010 Sum_probs=129.7
Q ss_pred cceEEEEecCCCCCc--cccHHH-HHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 54 VKATVYMTHGYGSDT--GWMFQK-ICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~--~~~~~~-~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
++|+|||+||++++. ...|.. +.+.|.+. ||+|+++|+||++. .+..+++..+++.+.. .
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~-----------~~~~~~~~~~~~~l~~-----~ 66 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT-----------ARESIWLPFMETELHC-----D 66 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT-----------CCHHHHHHHHHHTSCC-----C
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc-----------ccHHHHHHHHHHHhCc-----C
Confidence 468999999999873 125655 78889887 99999999998632 1234556666665543 2
Q ss_pred CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChH
Q 020633 130 LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE 209 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (323)
.+++|+||||||.+++.++.++| |+++|++++........ ... .. . +. ..
T Consensus 67 ~~~~lvG~S~Gg~ia~~~a~~~p---v~~lvl~~~~~~~~~~~-----~~~----~~----~--------~~----~~-- 116 (194)
T 2qs9_A 67 EKTIIIGHSSGAIAAMRYAETHR---VYAIVLVSAYTSDLGDE-----NER----AS----G--------YF----TR-- 116 (194)
T ss_dssp TTEEEEEETHHHHHHHHHHHHSC---CSEEEEESCCSSCTTCH-----HHH----HT----S--------TT----SS--
T ss_pred CCEEEEEcCcHHHHHHHHHHhCC---CCEEEEEcCCccccchh-----hhH----HH----h--------hh----cc--
Confidence 48999999999999999999988 89999999875421100 000 00 0 00 00
Q ss_pred HHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCc
Q 020633 210 KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289 (323)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 289 (323)
+ .. ...+..+.+|+++++|++|.++|.+.++.+.+.+ +.++++++++||
T Consensus 117 --------~------~~--------------~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~~gH 165 (194)
T 2qs9_A 117 --------P------WQ--------------WEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL---ETKLHKFTDCGH 165 (194)
T ss_dssp --------C------CC--------------HHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEESSCTT
T ss_pred --------c------cc--------------HHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc---CCeEEEeCCCCC
Confidence 0 00 0111234679999999999999999999998887 579999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhhcC
Q 020633 290 SLIQGEPDENANLVLKDMREWIDERVERYG 319 (323)
Q Consensus 290 ~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 319 (323)
+.+.++|+. + ..+.+||++......
T Consensus 166 ~~~~~~p~~----~-~~~~~fl~~~~~~~~ 190 (194)
T 2qs9_A 166 FQNTEFHEL----I-TVVKSLLKVPALEHH 190 (194)
T ss_dssp SCSSCCHHH----H-HHHHHHHTCCCCCCC
T ss_pred ccchhCHHH----H-HHHHHHHHhhhhhhh
Confidence 999766543 4 455699987765443
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-26 Score=167.93 Aligned_cols=172 Identities=16% Similarity=0.093 Sum_probs=133.8
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
++++|||+||++++....|......+... ++.+|++|++. .+++++++++.++++++. .+++
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~-------~~~~ 77 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFPH---WQRIRQREWYQ--------ADLDRWVLAIRRELSVCT-------QPVI 77 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCTT---SEECCCSCCSS--------CCHHHHHHHHHHHHHTCS-------SCEE
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcCC---eEEEeccCCCC--------cCHHHHHHHHHHHHHhcC-------CCeE
Confidence 36899999999988733777666654433 46778888752 378999999999988753 3899
Q ss_pred EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHH
Q 020633 134 LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
++|||+||.+++.++.++|++ ++++|+++|........ . .
T Consensus 78 l~G~S~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~-----------------------~----------~------ 117 (191)
T 3bdv_A 78 LIGHSFGALAACHVVQQGQEG-IAGVMLVAPAEPMRFEI-----------------------D----------D------ 117 (191)
T ss_dssp EEEETHHHHHHHHHHHTTCSS-EEEEEEESCCCGGGGTC-----------------------T----------T------
T ss_pred EEEEChHHHHHHHHHHhcCCC-ccEEEEECCCccccccC-----------------------c----------c------
Confidence 999999999999999999998 99999999875421100 0 0
Q ss_pred HhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccccc
Q 020633 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
...+.++++|+++++|++|.++|++.++.+.+.+ ++++++++++||..+.
T Consensus 118 ---------------------------~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~ 167 (191)
T 3bdv_A 118 ---------------------------RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW---DSELVDVGEAGHINAE 167 (191)
T ss_dssp ---------------------------TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH---TCEEEECCSCTTSSGG
T ss_pred ---------------------------ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc---CCcEEEeCCCCccccc
Confidence 0345678999999999999999999999888876 6899999999999986
Q ss_pred CCCchhHHHHHHHHHHHHHHH
Q 020633 294 GEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 294 ~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+...+..+ +.+.|.+||++.
T Consensus 168 ~~~~~~~~-~~~~i~~fl~~~ 187 (191)
T 3bdv_A 168 AGFGPWEY-GLKRLAEFSEIL 187 (191)
T ss_dssp GTCSSCHH-HHHHHHHHHHTT
T ss_pred ccchhHHH-HHHHHHHHHHHh
Confidence 54434333 448999999765
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-25 Score=179.49 Aligned_cols=247 Identities=13% Similarity=0.127 Sum_probs=153.9
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCC-----------------CcceEEEEecCCCCC---cc-ccHHHHHHHHh-hCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQ-----------------KVKATVYMTHGYGSD---TG-WMFQKICISFA-TWG 83 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~-----------------~~~~~vv~~HG~~~~---~~-~~~~~~~~~l~-~~g 83 (323)
++..+++.+.. + .+.++.|.|.+. ++.|+||++||++.. .. ..|..++..|+ +.|
T Consensus 69 ~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g 146 (351)
T 2zsh_A 69 GVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCK 146 (351)
T ss_dssp TEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHT
T ss_pred CceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcC
Confidence 34444444443 5 777777877542 457999999996642 22 13788899998 679
Q ss_pred cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC----CCCCC-CeEEEEechhHHHHHHHhhhcCC---Cc
Q 020633 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE----PYRDL-PGFLFGESMGGAATMLMYFQSEP---NT 155 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~----~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~---~~ 155 (323)
|.|+++|+||.+.+. +....+|+.++++++.... ..+.. +++|+|||+||.+|+.+|.++++ +
T Consensus 147 ~~vv~~d~rg~~~~~--------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~- 217 (351)
T 2zsh_A 147 CVVVSVNYRRAPENP--------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID- 217 (351)
T ss_dssp SEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCC-
T ss_pred CEEEEecCCCCCCCC--------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCC-
Confidence 999999999987652 3455678888888887542 34567 89999999999999999999887 6
Q ss_pred eeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh-cCCCCcCCCCchhHHHHHH
Q 020633 156 WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTGKPRVGTMREIA 234 (323)
Q Consensus 156 v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (323)
++++|+++|............ .... ......... ......+. ........ .....
T Consensus 218 v~~~vl~~p~~~~~~~~~~~~---~~~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~---- 273 (351)
T 2zsh_A 218 VLGNILLNPMFGGNERTESEK---SLDG--------------KYFVTVRDR-DWYWKAFLPEGEDREHP--ACNPF---- 273 (351)
T ss_dssp CCEEEEESCCCCCSSCCHHHH---HHTT--------------TSSCCHHHH-HHHHHHHSCTTCCTTST--TTCTT----
T ss_pred eeEEEEECCccCCCcCChhhh---hcCC--------------CcccCHHHH-HHHHHHhCCCCCCCCCc--ccCCC----
Confidence 999999998865433211100 0000 000000000 00000000 00000000 00000
Q ss_pred HHHHHHHhcCCCCCc-CEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 235 RVCQYIQDNFSKVTV-PFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
......+.++++ |+|+++|++|.+++ ....+.+.+. +.++++++++++||.+++....+..+++.+.|.+||
T Consensus 274 ---~~~~~~l~~i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl 348 (351)
T 2zsh_A 274 ---SPRGKSLEGVSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFV 348 (351)
T ss_dssp ---STTSCCCTTCCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHH
T ss_pred ---CCCccchhhCCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHh
Confidence 001234556666 99999999999886 3344555442 247899999999999885322356778999999999
Q ss_pred HH
Q 020633 312 DE 313 (323)
Q Consensus 312 ~~ 313 (323)
++
T Consensus 349 ~~ 350 (351)
T 2zsh_A 349 NA 350 (351)
T ss_dssp HC
T ss_pred cC
Confidence 74
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=170.69 Aligned_cols=191 Identities=14% Similarity=0.064 Sum_probs=137.7
Q ss_pred EEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC-----CCcccCCChHHHhhcHHHHHH
Q 020633 45 QSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD-----GIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 45 ~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----~~~~~~~~~~~~~~d~~~~l~ 119 (323)
...+.+..+.+++||++||+|++.. .|..+++.|...|+.|+++|.+|++.-+ ........+++..+.+..+++
T Consensus 12 ~~~g~P~~~a~~~Vv~lHG~G~~~~-~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 90 (210)
T 4h0c_A 12 ITSGVPVQRAKKAVVMLHGRGGTAA-DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVA 90 (210)
T ss_dssp EEEESCTTTCSEEEEEECCTTCCHH-HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHH
T ss_pred eeCCCCcccCCcEEEEEeCCCCCHH-HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHH
Confidence 4455554477899999999998876 7778888888789999999999876422 111112234555566666666
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNK 199 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (323)
.+... +++..+++|+|+|+||.+++.++.++|++ +.++|.+++..........
T Consensus 91 ~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~-~~~vv~~sg~l~~~~~~~~------------------------- 143 (210)
T 4h0c_A 91 EIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARK-YGGIIAFTGGLIGQELAIG------------------------- 143 (210)
T ss_dssp HHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSC-CSEEEEETCCCCSSSCCGG-------------------------
T ss_pred HHHHh-CCChhhEEEEEcCCCcchHHHHHHhCccc-CCEEEEecCCCCChhhhhh-------------------------
Confidence 66543 45577999999999999999999999999 9999998875432111000
Q ss_pred ccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CC
Q 020633 200 MVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SA 277 (323)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 277 (323)
.......++|++++||++|+++|.+.++++.+.+. +.
T Consensus 144 -----------------------------------------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~ 182 (210)
T 4h0c_A 144 -----------------------------------------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNA 182 (210)
T ss_dssp -----------------------------------------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTC
T ss_pred -----------------------------------------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 00001125799999999999999999888877763 34
Q ss_pred CccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 278 DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 278 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+++++++++.||.+. .+ -.+.+.+||.
T Consensus 183 ~v~~~~ypg~gH~i~----~~----el~~i~~wL~ 209 (210)
T 4h0c_A 183 AVSQVVYPGRPHTIS----GD----EIQLVNNTIL 209 (210)
T ss_dssp EEEEEEEETCCSSCC----HH----HHHHHHHTTT
T ss_pred CeEEEEECCCCCCcC----HH----HHHHHHHHHc
Confidence 578999999999876 22 3567788874
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-25 Score=177.04 Aligned_cols=253 Identities=9% Similarity=0.006 Sum_probs=156.3
Q ss_pred CcccceeEEEcCCC--cEEEEEecCCC-CCcceEEEEecCCC---CCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCC
Q 020633 27 GVRNGKKYFETPNG--KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISFATW-GYAVFAADLLGHGRSDG 99 (323)
Q Consensus 27 ~~~~~~~~~~~~~g--~l~~~~~~~~~-~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~ 99 (323)
++..++..+...+| ++.++.|.|.+ .++.|+||++||++ ++.. .|..++..|+++ ||.|+++|+||+|.+..
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~ 126 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTF 126 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred CceEEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChh-hhHHHHHHHHHhcCcEEEEecCCCCCCCCC
Confidence 55667788888888 69999998863 35679999999998 5655 777888888874 99999999999998753
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCc
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~ 173 (323)
+ ...+|+.++++++... .+++..+++|+|||+||.+++.++.+++++ .++++++++|.........
T Consensus 127 ~--------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~ 198 (323)
T 1lzl_A 127 P--------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV 198 (323)
T ss_dssp T--------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH
T ss_pred C--------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCch
Confidence 2 2345555555555431 112245899999999999999999876531 2899999999876433211
Q ss_pred hhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCC----cCCCCchhHHHHHHHHHHHHHhcCCCCCc
Q 020633 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR----YTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
. ... ... ........ .......+...... .......... ....+.. .+
T Consensus 199 ~---~~~-------~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~---------~~~~~~~-~~ 250 (323)
T 1lzl_A 199 S---MTN-------FVD-------TPLWHRPN-AILSWKYYLGESYSGPEDPDVSIYAAPS---------RATDLTG-LP 250 (323)
T ss_dssp H---HHH-------CSS-------CSSCCHHH-HHHHHHHHHCTTCCCTTCSCCCTTTCGG---------GCSCCTT-CC
T ss_pred h---HHH-------hcc-------CCCCCHHH-HHHHHHHhCCCCcccccccCCCcccCcc---------cCcccCC-CC
Confidence 0 000 000 00000000 00000111111100 0000000000 0011111 26
Q ss_pred CEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 250 PFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
|+++++|++|.++ .....+.+.+. +.+++++++++++|.+.+....+..+++.+.+.+||++++...
T Consensus 251 P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 251 PTYLSTMELDPLR--DEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp CEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred hhheEECCcCCch--HHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999987 34455555542 3468999999999986643333457789999999999987643
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-25 Score=194.29 Aligned_cols=245 Identities=16% Similarity=0.113 Sum_probs=167.5
Q ss_pred cceeEEEcCCC-cEEEEEecCCC-------CCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCC---CcCC
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLD-------QKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLG---HGRS 97 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~-------~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G---~G~s 97 (323)
.+...+...+| +++++.+.|.+ +++.|+||++||++++.. ..|..++..|+++||.|+++|+|| +|.+
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 45667777788 99999998864 245789999999986532 256778889999999999999999 7766
Q ss_pred CCCcccCCCh-HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh
Q 020633 98 DGIRCYLGDM-EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 98 ~~~~~~~~~~-~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~ 176 (323)
....... .+ ....+|+.+.++++......+..+++|+|||+||.+++.++.. |++ ++++|+++|......
T Consensus 471 ~~~~~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~-~~~~v~~~~~~~~~~------ 541 (662)
T 3azo_A 471 YRERLRG-RWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDV-YACGTVLYPVLDLLG------ 541 (662)
T ss_dssp HHHTTTT-TTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCC-CSEEEEESCCCCHHH------
T ss_pred HHHhhcc-ccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCc-eEEEEecCCccCHHH------
Confidence 3211110 11 2336778888888877654557799999999999999998875 888 999999988654210
Q ss_pred HHHHHhh-hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEe
Q 020633 177 LHLFMYG-LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
... ....+. .......+...+ .. . +.+.. ......+.++++|+|+++
T Consensus 542 ----~~~~~~~~~~-----------------~~~~~~~~~~~~------~~---~-~~~~~-~sp~~~~~~~~~P~lii~ 589 (662)
T 3azo_A 542 ----WADGGTHDFE-----------------SRYLDFLIGSFE------EF---P-ERYRD-RAPLTRADRVRVPFLLLQ 589 (662)
T ss_dssp ----HHTTCSCGGG-----------------TTHHHHHTCCTT------TC---H-HHHHH-TCGGGGGGGCCSCEEEEE
T ss_pred ----Hhcccccchh-----------------hHhHHHHhCCCc------cc---h-hHHHh-hChHhHhccCCCCEEEEe
Confidence 000 000000 000000000000 00 0 00000 002345677889999999
Q ss_pred eCCCcccCchhHHHHHHHcCCC--CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 256 GTADGVTCPTSSKLLYEKASSA--DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
|++|..+|++.++.+++.+... .+++++++++||.+. ..+...++.+.+.+||.+++...
T Consensus 590 G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 590 GLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFR---RKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp ETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCC---SHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCC---ChHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999988432 358999999999875 24567789999999999998653
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=174.05 Aligned_cols=194 Identities=14% Similarity=0.077 Sum_probs=144.1
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCc---CCCCC-----cccCCChHH
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHG---RSDGI-----RCYLGDMEK 109 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G---~s~~~-----~~~~~~~~~ 109 (323)
++ .++|..+.+.. .++|+||++||++++.. .|..+.+.|.+ ||.|+++|.+++. .+... .....++..
T Consensus 14 ~~~~l~~~~~~~~~-~~~p~vv~lHG~g~~~~-~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~ 90 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK-ESRECLFLLHGSGVDET-TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILA 90 (223)
T ss_dssp CSSSSCEEEESTTS-SCCCEEEEECCTTBCTT-TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHH
T ss_pred cCCCceEEEeCCCC-CCCCEEEEEecCCCCHH-HHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHHHH
Confidence 45 78888777754 45699999999998877 78889999976 8999999988742 11100 011124566
Q ss_pred HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
.++++.++++.+..+.+++..+++|+|||+||.+++.++.++|++ ++++|++++......
T Consensus 91 ~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~------------------- 150 (223)
T 3b5e_A 91 ETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGI-VRLAALLRPMPVLDH------------------- 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTS-CSEEEEESCCCCCSS-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccc-cceEEEecCccCccc-------------------
Confidence 678888888888665444456899999999999999999999998 999999998643210
Q ss_pred cccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
. .....+++|+++++|++|.++|.+.++
T Consensus 151 ----------------------------~-----------------------~~~~~~~~P~li~~G~~D~~v~~~~~~- 178 (223)
T 3b5e_A 151 ----------------------------V-----------------------PATDLAGIRTLIIAGAADETYGPFVPA- 178 (223)
T ss_dssp ----------------------------C-----------------------CCCCCTTCEEEEEEETTCTTTGGGHHH-
T ss_pred ----------------------------c-----------------------ccccccCCCEEEEeCCCCCcCCHHHHH-
Confidence 0 011235789999999999999999988
Q ss_pred HHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 270 LYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+.+.. .++++++++ +||.+. .+ ..+.+.+||++.+.
T Consensus 179 ~~~~l~~~g~~~~~~~~~-~gH~~~----~~----~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 179 LVTLLSRHGAEVDARIIP-SGHDIG----DP----DAAIVRQWLAGPIA 218 (223)
T ss_dssp HHHHHHHTTCEEEEEEES-CCSCCC----HH----HHHHHHHHHHCC--
T ss_pred HHHHHHHCCCceEEEEec-CCCCcC----HH----HHHHHHHHHHhhhh
Confidence 8877732 257899999 999986 23 34688899987654
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=180.00 Aligned_cols=255 Identities=15% Similarity=0.173 Sum_probs=152.3
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCC----CcceEEEEecCCCCC---cc-ccHHHHHHHHh-hCCcEEEEecCCCCc
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQ----KVKATVYMTHGYGSD---TG-WMFQKICISFA-TWGYAVFAADLLGHG 95 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~----~~~~~vv~~HG~~~~---~~-~~~~~~~~~l~-~~g~~v~~~d~~G~G 95 (323)
.++..+++.+.. + .+.+..|.|.+. ++.|+||++||++.. .. ..|..++..|+ +.||.|+++|+||++
T Consensus 51 ~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~ 128 (338)
T 2o7r_A 51 SPVLTKDLALNP--LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAP 128 (338)
T ss_dssp CSEEEEEEEEET--TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCEEEEEEEecC--CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCC
Confidence 345555555554 4 677777776542 567999999998732 12 13788888998 679999999999987
Q ss_pred CCCCCcccCCChHHHhhcHHHHHHHHHhcCC------CCCCCeEEEEechhHHHHHHHhhhcCC--------CceeEEEE
Q 020633 96 RSDGIRCYLGDMEKVAASSLSFFKHVRDSEP------YRDLPGFLFGESMGGAATMLMYFQSEP--------NTWTGLIF 161 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~--------~~v~~~vl 161 (323)
.+ .+....+|+.++++++..... .+..+++|+|||+||.+|+.+|.++|+ + ++++|+
T Consensus 129 ~~--------~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~-v~~~vl 199 (338)
T 2o7r_A 129 EH--------RLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLK-IKGLVL 199 (338)
T ss_dssp TT--------CTTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCC-EEEEEE
T ss_pred CC--------CCchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCc-eeEEEE
Confidence 64 334567888888888876421 112589999999999999999999887 6 999999
Q ss_pred ccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHh-cCCCCcCC-CCchhHHHHHHHHHHH
Q 020633 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIA-SNPRRYTG-KPRVGTMREIARVCQY 239 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (323)
++|............ .. . ......... ......... ........ .......... .
T Consensus 200 ~~p~~~~~~~~~~~~---~~--~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 256 (338)
T 2o7r_A 200 DEPGFGGSKRTGSEL---RL--A------------NDSRLPTFV-LDLIWELSLPMGADRDHEYCNPTAESEPL-Y---- 256 (338)
T ss_dssp ESCCCCCSSCCHHHH---HT--T------------TCSSSCHHH-HHHHHHHHSCTTCCTTSTTTCCC----CC-T----
T ss_pred ECCccCCCcCChhhh---cc--C------------CCcccCHHH-HHHHHHHhCCCCCCCCCcccCCCCCCccc-c----
Confidence 998765433211100 00 0 000000000 000000000 00000000 0000000000 0
Q ss_pred HHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 240 IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 240 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
..+.+..+.+|+|+++|++|.+++. .+.+.+.+. ..++++++++++||.+++.++ +..+++.+.|.+||++++..
T Consensus 257 ~~~~l~~~~~P~Lvi~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~-~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 257 SFDKIRSLGWRVMVVGCHGDPMIDR--QMELAERLEKKGVDVVAQFDVGGYHAVKLEDP-EKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp HHHHHHHHTCEEEEEEETTSTTHHH--HHHHHHHHHHTTCEEEEEEESSCCTTGGGTCH-HHHHHHHHHHHHHHC-----
T ss_pred cHhhhcCCCCCEEEEECCCCcchHH--HHHHHHHHHHCCCcEEEEEECCCceEEeccCh-HHHHHHHHHHHHHHHhhccc
Confidence 0012234567999999999999873 333444331 256899999999999886655 34677999999999888754
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=198.55 Aligned_cols=235 Identities=14% Similarity=0.121 Sum_probs=163.7
Q ss_pred ceeEEEcCCC--cEEEEEecCCC---CCcceEEEEecCCCCCcc--ccHHH----HHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 31 GKKYFETPNG--KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMFQK----ICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 31 ~~~~~~~~~g--~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~--~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
+...+...+| ++++..+.|.+ +++.|+||++||++.... ..|.. ++..|+++||.|+++|+||+|.+..
T Consensus 456 ~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~ 535 (706)
T 2z3z_A 456 RTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA 535 (706)
T ss_dssp EEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch
Confidence 4566777777 89999998865 235689999999775541 13443 6788988999999999999998863
Q ss_pred Cccc--CCCh-HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh
Q 020633 100 IRCY--LGDM-EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~~~~--~~~~-~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~ 176 (323)
.... ...+ ....+|+.++++++.....++..+++|+||||||.+++.++.++|++ ++++|+++|........ . .
T Consensus 536 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~-~-~ 612 (706)
T 2z3z_A 536 AFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDV-FKVGVAGGPVIDWNRYA-I-M 612 (706)
T ss_dssp HHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTT-EEEEEEESCCCCGGGSB-H-H
T ss_pred hHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCc-EEEEEEcCCccchHHHH-h-h
Confidence 2111 0011 34468888899988765333355899999999999999999999998 99999999875422100 0 0
Q ss_pred HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEee
Q 020633 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHG 256 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 256 (323)
....+...+.. .. ..+.. ......+.++++|+|+++|
T Consensus 613 ---------------------------------~~~~~~~~~~~-----~~----~~~~~-~~~~~~~~~i~~P~lii~G 649 (706)
T 2z3z_A 613 ---------------------------------YGERYFDAPQE-----NP----EGYDA-ANLLKRAGDLKGRLMLIHG 649 (706)
T ss_dssp ---------------------------------HHHHHHCCTTT-----CH----HHHHH-HCGGGGGGGCCSEEEEEEE
T ss_pred ---------------------------------hhhhhcCCccc-----Ch----hhhhh-CCHhHhHHhCCCCEEEEee
Confidence 00000000000 00 00000 0123456778899999999
Q ss_pred CCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 257 TADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++|..+|++.++.+.+.+. +..+++++++++||.+..+ ..+++.+.+.+||++++
T Consensus 650 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 650 AIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGP----DRVHLYETITRYFTDHL 706 (706)
T ss_dssp TTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTT----HHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcc----cHHHHHHHHHHHHHHhC
Confidence 9999999999998888773 2456899999999999843 56779999999998763
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-26 Score=201.33 Aligned_cols=238 Identities=16% Similarity=0.108 Sum_probs=167.5
Q ss_pred ccceeEEEcCCC--cEEEEEecCCC---CCcceEEEEecCCCCCcc--ccHH-----HHHHHHhhCCcEEEEecCCCCcC
Q 020633 29 RNGKKYFETPNG--KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMFQ-----KICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 29 ~~~~~~~~~~~g--~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~--~~~~-----~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
..+.+.+...+| +|++..+.|.+ +++.|+||++||++++.. ..|. .+++.|+++||.|+++|+||+|.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~ 565 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPR 565 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 456677888787 89999998864 245789999999987631 1333 67888989999999999999999
Q ss_pred CCCCccc--CCCh-HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc
Q 020633 97 SDGIRCY--LGDM-EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173 (323)
Q Consensus 97 s~~~~~~--~~~~-~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~ 173 (323)
|...... ...+ ...++|+.++++++......+..+++++||||||.+++.++.++|++ ++++|+++|........
T Consensus 566 s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~- 643 (741)
T 2ecf_A 566 RGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDS-YACGVAGAPVTDWGLYD- 643 (741)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCCGGGSB-
T ss_pred CChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCc-eEEEEEcCCCcchhhhc-
Confidence 7632111 0111 23468889999998765433356899999999999999999999998 99999999876432100
Q ss_pred hhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEE
Q 020633 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
. . +. ..+...+. .. ...+.. ......+.++++|+|+
T Consensus 644 ~-~-----------~~----------------------~~~~~~~~--------~~-~~~~~~-~~~~~~~~~i~~P~li 679 (741)
T 2ecf_A 644 S-H-----------YT----------------------ERYMDLPA--------RN-DAGYRE-ARVLTHIEGLRSPLLL 679 (741)
T ss_dssp H-H-----------HH----------------------HHHHCCTG--------GG-HHHHHH-HCSGGGGGGCCSCEEE
T ss_pred c-c-----------cc----------------------hhhcCCcc--------cC-hhhhhh-cCHHHHHhhCCCCEEE
Confidence 0 0 00 00000000 00 000000 0012446678899999
Q ss_pred EeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|++|..++.+.++.+++.+. +..+++++++++||.+.. +..+++.+.+.+||+++++
T Consensus 680 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 680 IHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSG----ADALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCH----HHHHHHHHHHHHHHHHHHC
T ss_pred EccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCC----CchhHHHHHHHHHHHHhcC
Confidence 9999999999999999988874 234689999999999983 2236799999999998874
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-24 Score=172.40 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=161.3
Q ss_pred cccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCccc
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
+..+++.+...+|+|.++.|.|.+ .+.|+||++||++ ++.. .|..++..|+. .||.|+++|+|+.+..
T Consensus 61 ~~~~~~~~~~~~g~i~~~~~~p~~-~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~V~~~dyr~~p~~------ 132 (326)
T 3ga7_A 61 MTTRTCAVPTPYGDVTTRLYSPQP-TSQATLYYLHGGGFILGNLD-THDRIMRLLARYTGCTVIGIDYSLSPQA------ 132 (326)
T ss_dssp CEEEEEEECCTTSCEEEEEEESSS-SCSCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHCSEEEEECCCCTTTS------
T ss_pred cceEEEEeecCCCCeEEEEEeCCC-CCCcEEEEECCCCcccCChh-hhHHHHHHHHHHcCCEEEEeeCCCCCCC------
Confidence 444677788888899999999876 4569999999988 6666 78888899988 6999999999977544
Q ss_pred CCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhcCCC-----ceeEEEEccCcccCCCCCchh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQSEPN-----TWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-----~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.+....+|+.++++++.... +++..+++|+|+|+||.+|+.++..+++. .++++++++|..........
T Consensus 133 --~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~- 209 (326)
T 3ga7_A 133 --RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSR- 209 (326)
T ss_dssp --CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHH-
T ss_pred --CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhH-
Confidence 34455688888888887642 34567999999999999999999876542 28899999887654321100
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhc---CCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS---NPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
... ...+. ............. ....... .... .....+.+...|++
T Consensus 210 ---~~~-------~~~~~----------~l~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~P~l 258 (326)
T 3ga7_A 210 ---RLF-------GGAWD----------GLTREDLDMYEKAYLRNDEDRES-PWYC----------LFNNDLTRDVPPCF 258 (326)
T ss_dssp ---HHC-------CCTTT----------TCCHHHHHHHHHHHCSSGGGGGC-TTTS----------GGGSCCSSCCCCEE
T ss_pred ---hhh-------cCCCC----------CCCHHHHHHHHHHhCCCCCccCC-cccC----------CCcchhhcCCCCEE
Confidence 000 00000 0000000000000 0000000 0000 01123444567999
Q ss_pred EEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCC-CchhHHHHHHHHHHHHHHHHhh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGE-PDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+++|+.|.+++ ....+++.+. +..++++++++++|.+.... ..+..+++.+.+.+||++++..
T Consensus 259 i~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 259 IASAEFDPLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp EEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 99999999984 5555655553 34579999999999886432 2245678999999999998864
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=173.54 Aligned_cols=179 Identities=13% Similarity=0.107 Sum_probs=128.1
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH--HhcCCCCCCC
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV--RDSEPYRDLP 131 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~~~~~~ 131 (323)
+.|+|||+||++++.. .|..+++.|+++||.|+++|+||.+.. .+.....+.+.+..... ......+..+
T Consensus 48 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~s~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 119 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS-TYAGLLSHWASHGFVVAAAETSNAGTG-------REMLACLDYLVRENDTPYGTYSGKLNTGR 119 (258)
T ss_dssp CEEEEEEECCTTCCGG-GGHHHHHHHHHHTCEEEEECCSCCTTS-------HHHHHHHHHHHHHHHSSSSTTTTTEEEEE
T ss_pred CceEEEEECCCCCCch-hHHHHHHHHHhCCeEEEEecCCCCccH-------HHHHHHHHHHHhcccccccccccccCccc
Confidence 6799999999998877 899999999999999999999953110 01222222222221100 0011112358
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++++||||||.+++.++ .+.+ ++++++++|......
T Consensus 120 i~l~G~S~GG~~a~~~a--~~~~-v~~~v~~~~~~~~~~----------------------------------------- 155 (258)
T 2fx5_A 120 VGTSGHSQGGGGSIMAG--QDTR-VRTTAPIQPYTLGLG----------------------------------------- 155 (258)
T ss_dssp EEEEEEEHHHHHHHHHT--TSTT-CCEEEEEEECCSSTT-----------------------------------------
T ss_pred eEEEEEChHHHHHHHhc--cCcC-eEEEEEecCcccccc-----------------------------------------
Confidence 99999999999999988 3455 999999886432000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcCCCCccEEEecCCCcc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
+ ....+.++++|+|+|+|++|.+++.+. .+.+.+.. ..++++++++++||.
T Consensus 156 ---------~------------------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~H~ 207 (258)
T 2fx5_A 156 ---------H------------------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NVPVFWGERRYVSHF 207 (258)
T ss_dssp ---------C------------------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SSCEEEEEESSCCTT
T ss_pred ---------c------------------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CCCeEEEEECCCCCc
Confidence 0 013456788999999999999999886 78887774 356899999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 291 LIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+.+.+++ +.+.+.+||++++.
T Consensus 208 ~~~~~~~~----~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 208 EPVGSGGA----YRGPSTAWFRFQLM 229 (258)
T ss_dssp SSTTTCGG----GHHHHHHHHHHHHH
T ss_pred cccchHHH----HHHHHHHHHHHHhc
Confidence 99777765 78888889987764
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-26 Score=176.45 Aligned_cols=206 Identities=10% Similarity=0.069 Sum_probs=133.5
Q ss_pred CcceEEEEecCCC-----CCccccHHHHHHHH----hhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 53 KVKATVYMTHGYG-----SDTGWMFQKICISF----ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 53 ~~~~~vv~~HG~~-----~~~~~~~~~~~~~l----~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
+++|+||++||++ ++.. .|..+++.| .+.||.|+++|+|+.+.+ .+...++|+.++++++..
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~-~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~--------~~~~~~~d~~~~~~~l~~ 109 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAVSNITRLVK 109 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCcCChH-HHHHHHHHHhhhhccCCcEEEEeecccCCCC--------CCCcHHHHHHHHHHHHHH
Confidence 5689999999965 2334 788899988 578999999999987654 233445566666666554
Q ss_pred cCCCCCCCeEEEEechhHHHHHHHhhhc-----------------CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 124 SEPYRDLPGFLFGESMGGAATMLMYFQS-----------------EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 124 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------------p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
..+ ..+++|+|||+||.+|+.++.++ +++ ++++|++++....... ... .....
T Consensus 110 ~~~--~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~-v~~~v~~~~~~~~~~~------~~~-~~~~~ 179 (273)
T 1vkh_A 110 EKG--LTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQI-VKRVFLLDGIYSLKEL------LIE-YPEYD 179 (273)
T ss_dssp HHT--CCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTT-EEEEEEESCCCCHHHH------HHH-CGGGH
T ss_pred hCC--cCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcc-cceeeeecccccHHHh------hhh-cccHH
Confidence 422 56899999999999999999886 667 9999999886542110 000 00000
Q ss_pred hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh
Q 020633 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS 266 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 266 (323)
.+. ...+......+.. . ....... ....+..+++|+|+++|++|.++|.+.
T Consensus 180 ~~~---------------------~~~~~~~~~~~~~--~---~~~~~~~---~~~~~~~~~~P~lii~G~~D~~vp~~~ 230 (273)
T 1vkh_A 180 CFT---------------------RLAFPDGIQMYEE--E---PSRVMPY---VKKALSRFSIDMHLVHSYSDELLTLRQ 230 (273)
T ss_dssp HHH---------------------HHHCTTCGGGCCC--C---HHHHHHH---HHHHHHHHTCEEEEEEETTCSSCCTHH
T ss_pred HHH---------------------HHHhcccccchhh--c---ccccChh---hhhcccccCCCEEEEecCCcCCCChHH
Confidence 000 0000000000000 0 0000000 111223368999999999999999999
Q ss_pred HHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHH
Q 020633 267 SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 267 ~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
++.+.+.+. +.++++++++++||...++. +++.+.|.+||
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-----~~~~~~i~~fl 272 (273)
T 1vkh_A 231 TNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-----GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-----HHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCceEEEEeCCCcccccccC-----hHHHHHHHHHc
Confidence 999988873 23578999999999988654 44888888775
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=170.48 Aligned_cols=198 Identities=14% Similarity=0.184 Sum_probs=142.4
Q ss_pred EEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC-----CcEEEEecCCCCcCC-----------------CCC
Q 020633 43 FTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW-----GYAVFAADLLGHGRS-----------------DGI 100 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-----g~~v~~~d~~G~G~s-----------------~~~ 100 (323)
.+..+.+.+ +++|+||++||++++.. .|..+.+.|..+ |+.|+++|.|+++.+ ...
T Consensus 12 ~~~~~~~~~-~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 89 (239)
T 3u0v_A 12 QRCIVSPAG-RHSASLIFLHGSGDSGQ-GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDC 89 (239)
T ss_dssp CEEEECCSS-CCCEEEEEECCTTCCHH-HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSS
T ss_pred CceecCCCC-CCCcEEEEEecCCCchh-hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCccc
Confidence 344444443 67899999999998877 788888888765 689999888754211 111
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~ 180 (323)
.....++++.++++..+++.+.. ..++..+++|+|||+||.+++.++.++|++ ++++|++++.........
T Consensus 90 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~-~~~~v~~~~~~~~~~~~~------- 160 (239)
T 3u0v_A 90 PEHLESIDVMCQVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQD-VAGVFALSSFLNKASAVY------- 160 (239)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTT-SSEEEEESCCCCTTCHHH-------
T ss_pred ccchhhHHHHHHHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccc-cceEEEecCCCCchhHHH-------
Confidence 11112567777888888877653 223466899999999999999999999998 999999998754221000
Q ss_pred HhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-EEEEeeCCC
Q 020633 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVHGTAD 259 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D 259 (323)
.. .. .....+| +++++|++|
T Consensus 161 -------------------------------~~--------------------------~~--~~~~~~pp~li~~G~~D 181 (239)
T 3u0v_A 161 -------------------------------QA--------------------------LQ--KSNGVLPELFQCHGTAD 181 (239)
T ss_dssp -------------------------------HH--------------------------HH--HCCSCCCCEEEEEETTC
T ss_pred -------------------------------HH--------------------------HH--hhccCCCCEEEEeeCCC
Confidence 00 00 1233567 999999999
Q ss_pred cccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
.++|.+.++.+.+.+. +.++++++++++||.+. .+ ..+.+.+||++++...
T Consensus 182 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~----~~----~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 182 ELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS----KT----ELDILKLWILTKLPGE 234 (239)
T ss_dssp SSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----HH----HHHHHHHHHHHHCC--
T ss_pred CccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC----HH----HHHHHHHHHHHhCCCc
Confidence 9999988888888773 23689999999999987 33 5778889998887543
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-26 Score=169.19 Aligned_cols=186 Identities=11% Similarity=0.006 Sum_probs=119.1
Q ss_pred ceEEEEecCCCCCccc-cHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 55 KATVYMTHGYGSDTGW-MFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~-~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
.|+|||+||++++... ....+.+.+.+. +|+|+++|+||+|.+ ..+++..+++... .++
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~------------~~~~l~~~~~~~~------~~~ 63 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAE------------AAEMLESIVMDKA------GQS 63 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHH------------HHHHHHHHHHHHT------TSC
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH------------HHHHHHHHHHhcC------CCc
Confidence 3799999999876541 234456666554 599999999999843 3456666666654 448
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
++|+|+||||.+|+.+|.+++.. +..++...+..... .......... ....
T Consensus 64 i~l~G~SmGG~~a~~~a~~~~~~-~~~~~~~~~~~~~~----------------~~~~~~~~~~----~~~~-------- 114 (202)
T 4fle_A 64 IGIVGSSLGGYFATWLSQRFSIP-AVVVNPAVRPFELL----------------SDYLGENQNP----YTGQ-------- 114 (202)
T ss_dssp EEEEEETHHHHHHHHHHHHTTCC-EEEESCCSSHHHHG----------------GGGCEEEECT----TTCC--------
T ss_pred EEEEEEChhhHHHHHHHHHhccc-chheeeccchHHHH----------------HHhhhhhccc----cccc--------
Confidence 99999999999999999999987 65555444321100 0000000000 0000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
....................++++|+|+|+|++|.+||++.+.+++ +++++.+++|+||.+
T Consensus 115 --------------~~~~~~~~~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~-----~~~~l~i~~g~~H~~ 175 (202)
T 4fle_A 115 --------------KYVLESRHIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY-----TPCRQTVESGGNHAF 175 (202)
T ss_dssp --------------EEEECHHHHHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT-----TTSEEEEESSCCTTC
T ss_pred --------------cccchHHHHHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh-----hCCEEEEECCCCcCC
Confidence 0000001111111123445678999999999999999998877654 568999999999964
Q ss_pred ccCCCchhHHHHHHHHHHHHH
Q 020633 292 IQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~ 312 (323)
. ..++ +.+.|.+||+
T Consensus 176 ~--~~~~----~~~~I~~FL~ 190 (202)
T 4fle_A 176 V--GFDH----YFSPIVTFLG 190 (202)
T ss_dssp T--TGGG----GHHHHHHHHT
T ss_pred C--CHHH----HHHHHHHHHh
Confidence 3 3333 7788899996
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=173.07 Aligned_cols=221 Identities=12% Similarity=0.027 Sum_probs=139.7
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+.+ | ..+|+|+++|+||++.+... ..+++++++++.++++.+.. ..++
T Consensus 19 ~~~~~lv~lhg~~~~~~-~~~~~~~-l-~~~~~v~~~d~~G~~~~~~~---~~~~~~~~~~~~~~i~~~~~-----~~~~ 87 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAF-SYASLPR-L-KSDTAVVGLNCPYARDPENM---NCTHGAMIESFCNEIRRRQP-----RGPY 87 (265)
T ss_dssp TSSEEEEEECCTTCCGG-GGTTSCC-C-SSSEEEEEEECTTTTCGGGC---CCCHHHHHHHHHHHHHHHCS-----SCCE
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHh-c-CCCCEEEEEECCCCCCCCCC---CCCHHHHHHHHHHHHHHhCC-----CCCE
Confidence 45789999999998877 8888888 7 45799999999999766432 24899999999999988753 2379
Q ss_pred EEEEechhHHHHHHHhh---hcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccc-cccccCCh
Q 020633 133 FLFGESMGGAATMLMYF---QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKM-VGKAIKDP 208 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~---~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 208 (323)
+|+||||||.+|+.+|. .++++ ++++|++++........... ....+...+..... .+.... ........
T Consensus 88 ~l~GhS~Gg~ia~~~a~~l~~~~~~-v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 161 (265)
T 3ils_A 88 HLGGWSSGGAFAYVVAEALVNQGEE-VHSLIIIDAPIPQAMEQLPR-AFYEHCNSIGLFAT----QPGASPDGSTEPPSY 161 (265)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCSSCCCCCCCH-HHHHHHHHTTTTTT----SSSSCSSSCSCCCTT
T ss_pred EEEEECHhHHHHHHHHHHHHhCCCC-ceEEEEEcCCCCCcccccCH-HHHHHHHHHHHhCC----CccccccCCHHHHHH
Confidence 99999999999999998 67777 99999998764332211111 11111111111100 000000 00000000
Q ss_pred HHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEE-EEeeCC---Cccc--------------CchhHHH
Q 020633 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFL-TVHGTA---DGVT--------------CPTSSKL 269 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l-~i~g~~---D~~~--------------~~~~~~~ 269 (323)
... ...........+ ......+++|++ +++|++ |..+ +......
T Consensus 162 -~~~----------------~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 224 (265)
T 3ils_A 162 -LIP----------------HFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDG 224 (265)
T ss_dssp -HHH----------------HHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTT
T ss_pred -HHH----------------HHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcch
Confidence 000 000000000000 112346899988 999999 9887 4444555
Q ss_pred HHHHcCCCCccEEEecCCCcccc--cCCCchhHHHHHHHHHHHH
Q 020633 270 LYEKASSADKSIKIYDGMYHSLI--QGEPDENANLVLKDMREWI 311 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~i~~fl 311 (323)
+.+.....+.++++++|+||+.+ .+++ +++.+.|.+||
T Consensus 225 w~~~~~~~~~~~~~i~gagH~~~~~~e~~----~~v~~~i~~fL 264 (265)
T 3ils_A 225 WDTIMPGASFDIVRADGANHFTLMQKEHV----SIISDLIDRVM 264 (265)
T ss_dssp HHHHSTTCCEEEEEEEEEETTGGGSTTTT----HHHHHHHHHHT
T ss_pred HHHhCCccceeEEEcCCCCcceeeChhhH----HHHHHHHHHHh
Confidence 66655324789999999999999 4444 44888888886
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=178.85 Aligned_cols=243 Identities=14% Similarity=0.119 Sum_probs=146.9
Q ss_pred ccceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHh-hCCcEEEEecCCCCcCCCCCcccC
Q 020633 29 RNGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFA-TWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
..++..+...+|.+.++.| +. .++.|+||++||++ ++.. .|..++..|+ +.||.|+++|+||+|.+..+...
T Consensus 55 ~~~~~~i~~~~g~i~~~~y-~~-~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~- 130 (311)
T 1jji_A 55 RVEDRTIKGRNGDIRVRVY-QQ-KPDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAV- 130 (311)
T ss_dssp EEEEEEEEETTEEEEEEEE-ES-SSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHH-
T ss_pred eEEEEEecCCCCcEEEEEE-cC-CCCceEEEEECCcccccCChh-HhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcH-
Confidence 3567777777777777777 33 25689999999998 6666 7888999998 56999999999999998643211
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
.+....++++.+.++.+..+ ..+++|+|||+||.+|+.++..++++ .++++|+++|.......... ...
T Consensus 131 ~d~~~~~~~l~~~~~~~~~d----~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~---~~~- 202 (311)
T 1jji_A 131 YDCYDATKWVAENAEELRID----PSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPS---LLE- 202 (311)
T ss_dssp HHHHHHHHHHHHTHHHHTEE----EEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHH---HHH-
T ss_pred HHHHHHHHHHHhhHHHhCCC----chhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCcc---HHH-
Confidence 12223333333333333322 44899999999999999999876532 39999999998765332110 000
Q ss_pred hhhhhhhhcccccCCcccccccccCChHHH---HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.... .. ........ ..+......... .... .....+..+ .|+++++|++
T Consensus 203 ------~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------p~~~~l~~~-~P~li~~G~~ 254 (311)
T 1jji_A 203 ------FGEG-------LW---ILDQKIMSWFSEQYFSREEDKFN-PLAS----------VIFADLENL-PPALIITAEY 254 (311)
T ss_dssp ------TSSS-------CS---SCCHHHHHHHHHHHCSSGGGGGC-TTTS----------GGGSCCTTC-CCEEEEEEEE
T ss_pred ------hcCC-------Cc---cCCHHHHHHHHHHhCCCCccCCC-cccC----------cccccccCC-ChheEEEcCc
Confidence 0000 00 00000000 000000000000 0000 011223333 4999999999
Q ss_pred CcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDE 313 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~ 313 (323)
|.+++ ....+.+.+. +.+++++++++++|.+....+ ....+++.+.+.+||++
T Consensus 255 D~l~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 255 DPLRD--EGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp CTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred CcchH--HHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99885 3333434331 356899999999998875544 34567788999999864
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-24 Score=164.88 Aligned_cols=250 Identities=13% Similarity=0.108 Sum_probs=154.1
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
...+...+| ++.+ |.|.+ ++.|+||++||+| ++....+..+...+++.||.|+++|+|+.+. ..+
T Consensus 6 ~~~~~~~~~~~~~~--y~p~~-~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe--------~~~ 74 (274)
T 2qru_A 6 KNNQTLANGATVTI--YPTTT-EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPN--------TKI 74 (274)
T ss_dssp CEEEECTTSCEEEE--ECCSS-SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTT--------SCH
T ss_pred cccccccCCeeEEE--EcCCC-CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCC--------CCC
Confidence 345666677 6654 55654 5679999999988 4444233566777888899999999997542 267
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh---hcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF---QSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~---~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
...++|+.++++++..... ...+++|+|+|+||.+|+.++. ..+.. +++++++.+........ .... ......
T Consensus 75 p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~-~~~~vl~~~~~~~~~~~-~~~~-~~~~~~ 150 (274)
T 2qru_A 75 DHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLT-PQFLVNFYGYTDLEFIK-EPRK-LLKQAI 150 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCC-CSCEEEESCCSCSGGGG-SCCC-SCSSCC
T ss_pred cHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCC-ceEEEEEcccccccccC-Cchh-hccccc
Confidence 8889999999999985431 1358999999999999999987 34666 99999887755411000 0000 000000
Q ss_pred hhhhhcccccCCcccccccccCChHHH----------HHHhcCCCCc-CCCCchhHHHHHHHHHHHHHhcCCCCCcCEEE
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKL----------KVIASNPRRY-TGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
......... ................ ..+....... ....... ...+..+ .|+|+
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~l-pP~li 215 (274)
T 2qru_A 151 SAKEIAAID--QTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALS------------DETLKTF-PPCFS 215 (274)
T ss_dssp CSGGGTTSC--CSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCC------------HHHHHTS-CCEEE
T ss_pred cHHHHhhhc--ccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCC------------hhhhcCC-CCEEE
Confidence 000000000 0000000000000000 0111110000 0000000 0123445 79999
Q ss_pred EeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 254 VHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|+.|..++...++++.+.+ ++++++++++++|.+..+.+....+++.+.+.+||++
T Consensus 216 ~~G~~D~~~~~~~~~~l~~~~--~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 216 TASSSDEEVPFRYSKKIGRTI--PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp EEETTCSSSCTHHHHHHHHHS--TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCcCHHHHHHHHHhC--CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 999999999988888898888 6789999999999998766767777889999999975
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-24 Score=172.69 Aligned_cols=256 Identities=11% Similarity=0.094 Sum_probs=157.1
Q ss_pred cCcccceeEEEcCCCcEEEEEec-CCC-----------------------CCcceEEEEecCCCCC---cc-ccHHHHHH
Q 020633 26 QGVRNGKKYFETPNGKLFTQSFL-PLD-----------------------QKVKATVYMTHGYGSD---TG-WMFQKICI 77 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g~l~~~~~~-~~~-----------------------~~~~~~vv~~HG~~~~---~~-~~~~~~~~ 77 (323)
.++..+++.+...+| +.+..|. |.. .++.|+||++||++.. .. ..|..++.
T Consensus 60 ~~v~~~dv~~~~~~g-l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~ 138 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG-LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCR 138 (365)
T ss_dssp TTEEEEEEEEETTTT-EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHH
T ss_pred CCCceeeEEecCCCC-ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHH
Confidence 466777888888888 6566665 543 1357999999998642 22 24778888
Q ss_pred HHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcC----CCCCC-CeEEEEechhHHHHHHHhhhc
Q 020633 78 SFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSE----PYRDL-PGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 78 ~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~----~~~~~-~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
.|+.+ ||.|+++|+|+.+.. .+....+|+.++++++..+. .++.. +++|+|+|+||.+|+.++.+.
T Consensus 139 ~la~~~g~~Vv~~dyR~~p~~--------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~ 210 (365)
T 3ebl_A 139 RFVKLSKGVVVSVNYRRAPEH--------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRA 210 (365)
T ss_dssp HHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEeeCCCCCCC--------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHH
Confidence 88876 999999999976433 34566789999999998543 34566 899999999999999999876
Q ss_pred CC---CceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchh
Q 020633 152 EP---NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVG 228 (323)
Q Consensus 152 p~---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (323)
++ . ++++|+++|+............ ... ......... ......+...... .......
T Consensus 211 ~~~~~~-~~g~vl~~p~~~~~~~~~~~~~---~~~--------------~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 270 (365)
T 3ebl_A 211 ADEGVK-VCGNILLNAMFGGTERTESERR---LDG--------------KYFVTLQDR-DWYWKAYLPEDAD-RDHPACN 270 (365)
T ss_dssp HHTTCC-CCEEEEESCCCCCSSCCHHHHH---HTT--------------TSSCCHHHH-HHHHHHHSCTTCC-TTSTTTC
T ss_pred HhcCCc-eeeEEEEccccCCCcCChhhhh---cCC--------------CcccCHHHH-HHHHHHhCCCCCC-CCCcccC
Confidence 54 5 9999999998765432211100 000 000000000 0000000000000 0000000
Q ss_pred HHHHHHHHHHHHHhcCCCCC-cCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHH
Q 020633 229 TMREIARVCQYIQDNFSKVT-VPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLK 305 (323)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 305 (323)
.. ......+..+. .|+|+++|++|.+++. ...+.+.+. +..++++++++++|.+.+....+..+++.+
T Consensus 271 p~-------~~~~~~l~~~~~pP~Li~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~ 341 (365)
T 3ebl_A 271 PF-------GPNGRRLGGLPFAKSLIIVSGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVME 341 (365)
T ss_dssp TT-------STTCCCCTTSCCCCEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHH
T ss_pred CC-------CCcchhhccCCCCCEEEEEcCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHH
Confidence 00 00012223222 4899999999977643 344554442 356899999999998875533466788999
Q ss_pred HHHHHHHHHHhhcC
Q 020633 306 DMREWIDERVERYG 319 (323)
Q Consensus 306 ~i~~fl~~~~~~~~ 319 (323)
.|.+||+++++...
T Consensus 342 ~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 342 EISDFLNANLYYGS 355 (365)
T ss_dssp HHHHHHHHHCC---
T ss_pred HHHHHHHHhhhccc
Confidence 99999999986543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=9.2e-25 Score=193.46 Aligned_cols=237 Identities=14% Similarity=0.060 Sum_probs=161.3
Q ss_pred eEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc----cccHHHHHHHHh-hCCcEEEEecCCCCcCCCCCcc-
Q 020633 33 KYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQKICISFA-TWGYAVFAADLLGHGRSDGIRC- 102 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~----~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~- 102 (323)
..+ ..+| +|.+..+.|.+ .++.|+||++||++++. .+.+ .+...|+ ++||.|+++|+||+|.+.....
T Consensus 477 ~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~-~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~ 554 (740)
T 4a5s_A 477 DFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRL-NWATYLASTENIIVASFDGRGSGYQGDKIMH 554 (740)
T ss_dssp EEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCC-SHHHHHHHTTCCEEEEECCTTCSSSCHHHHG
T ss_pred EEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCc-CHHHHHHhcCCeEEEEEcCCCCCcCChhHHH
Confidence 344 6788 99999999875 35679999999997662 1121 2334555 5899999999999997653211
Q ss_pred --cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH
Q 020633 103 --YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 103 --~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~ 180 (323)
...--...++|+.++++++.....++..+++|+|||+||.+++.++.++|+. ++++|+++|........ ..+ .
T Consensus 555 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~v~~~p~~~~~~~~-~~~-~-- 629 (740)
T 4a5s_A 555 AINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV-FKCGIAVAPVSRWEYYD-SVY-T-- 629 (740)
T ss_dssp GGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSC-CSEEEEESCCCCGGGSB-HHH-H--
T ss_pred HHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCc-eeEEEEcCCccchHHhh-hHH-H--
Confidence 0001123468888899988855434457899999999999999999999998 99999999876532110 000 0
Q ss_pred HhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc-CEEEEeeCCC
Q 020633 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTVHGTAD 259 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D 259 (323)
..+. ................ ....+.++++ |+|+++|+.|
T Consensus 630 -----~~~~------------~~p~~~~~~~~~~~~~----------------------~~~~~~~i~~~P~Lii~G~~D 670 (740)
T 4a5s_A 630 -----ERYM------------GLPTPEDNLDHYRNST----------------------VMSRAENFKQVEYLLIHGTAD 670 (740)
T ss_dssp -----HHHH------------CCSSTTTTHHHHHHSC----------------------SGGGGGGGGGSEEEEEEETTC
T ss_pred -----HHHc------------CCCCccccHHHHHhCC----------------------HHHHHhcCCCCcEEEEEcCCC
Confidence 0000 0000000000000000 1234566776 9999999999
Q ss_pred cccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
..++++.+..+.+.+. +.+++++++++++|.+.. .+..+.+.+.+.+||++++...
T Consensus 671 ~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 671 DNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIAS---STAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCS---HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCC---CccHHHHHHHHHHHHHHHcCCC
Confidence 9999999998888873 345688999999999841 4567779999999999998643
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=169.14 Aligned_cols=230 Identities=14% Similarity=0.128 Sum_probs=145.8
Q ss_pred ceeEEE-cCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCCcCCCCCccc
Q 020633 31 GKKYFE-TPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 31 ~~~~~~-~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
+...+. ...| ++.+.++.|.+ .++.|+||++||++++.. .|.. +.+.+.+.||.|+++|+||+|.|......
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~ 94 (278)
T 3e4d_A 16 GVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHA-NVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELT 94 (278)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTT
T ss_pred EEEEEeccccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEecCCcccCcccccccc
Confidence 344443 4467 89999999875 467899999999998876 5655 44555566999999999999988543200
Q ss_pred C---------------------CC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE
Q 020633 104 L---------------------GD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 104 ~---------------------~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl 161 (323)
. .. .+..++++..+++.. ..++..+++|+|||+||.+|+.++.++|+. ++++++
T Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~ 170 (278)
T 3e4d_A 95 NWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQH---FRADMSRQSIFGHSMGGHGAMTIALKNPER-FKSCSA 170 (278)
T ss_dssp CTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHH---SCEEEEEEEEEEETHHHHHHHHHHHHCTTT-CSCEEE
T ss_pred cccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhh---cCCCcCCeEEEEEChHHHHHHHHHHhCCcc-cceEEE
Confidence 0 01 122234555555443 222236899999999999999999999998 999999
Q ss_pred ccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH
Q 020633 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|........... ..+...+ ......... . .... ..
T Consensus 171 ~~~~~~~~~~~~~~---~~~~~~~-----------------------------~~~~~~~~~----~---~~~~----~~ 207 (278)
T 3e4d_A 171 FAPIVAPSSADWSE---PALEKYL-----------------------------GADRAAWRR----Y---DACS----LV 207 (278)
T ss_dssp ESCCSCGGGCTTTH---HHHHHHH-----------------------------CSCGGGGGG----G---CHHH----HH
T ss_pred eCCcccccCCccch---hhHHHhc-----------------------------CCcHHHHHh----c---Chhh----Hh
Confidence 99876533211110 0000000 000000000 0 0000 11
Q ss_pred hcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 242 DNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
..+. ..+|+++++|++|.+++... .+.+.+.+.. .+++++++++++|... ..+...+.+.+|+.+.+
T Consensus 208 ~~~~-~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 208 EDGA-RFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYY------FISTFMDDHLKWHAERL 277 (278)
T ss_dssp HTTC-CCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHH
T ss_pred hcCC-CCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHH------HHHHHHHHHHHHHHHhc
Confidence 1112 35699999999999998532 5666666642 3468899999999865 24456777888888765
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=173.98 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=121.8
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC-CCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY-RDLP 131 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~-~~~~ 131 (323)
+++++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|... .. +|+.++++.+...... ...+
T Consensus 11 ~~~~~lv~lhg~g~~~~-~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~-----~~----~~~~~~~~~~~~~l~~~~~~~ 79 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA-SFRPLHAFLQG-ECEMLAAEPPGHGTNQTS-----AI----EDLEELTDLYKQELNLRPDRP 79 (242)
T ss_dssp TCCCEEESSCCCCHHHH-HHHHHHHHHCC-SCCCEEEECCSSCCSCCC-----TT----THHHHHHHHTTTTCCCCCCSS
T ss_pred CCCceEEEECCCCCCHH-HHHHHHHhCCC-CeEEEEEeCCCCCCCCCC-----Cc----CCHHHHHHHHHHHHHhhcCCC
Confidence 45789999999998877 89999999976 499999999999999642 12 3444444443222111 0248
Q ss_pred eEEEEechhHHHHHHHhhh------cCCCceeEEEEccCcc-cCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 132 GFLFGESMGGAATMLMYFQ------SEPNTWTGLIFSAPLF-VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~------~p~~~v~~~vl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
++|+||||||.+|+.+|.+ +|+. +++.+... ................ ..+.. ..... .
T Consensus 80 ~~lvGhSmGG~iA~~~A~~~~~~~~~p~~----v~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~-----~-- 144 (242)
T 2k2q_B 80 FVLFGHSMGGMITFRLAQKLEREGIFPQA----VIISAIQPPHIQRKKVSHLPDDQFL---DHIIQ-LGGMP-----A-- 144 (242)
T ss_dssp CEEECCSSCCHHHHHHHHHHHHHHCSSCS----EEEEEEECSCCCSCCCSSCTTHHHH---HTTCC-TTCCC-----C--
T ss_pred EEEEeCCHhHHHHHHHHHHHHHcCCCCCE----EEEECCCCCCCCcccccCCCHHHHH---HHHHH-hCCCC-----h--
Confidence 9999999999999999986 4554 33332111 1110000000000000 00000 00000 0
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEE
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKI 283 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
........ ...+. .. ........... ...+.++++|+++|+|++|.+++ .....+.+.. ++.++++
T Consensus 145 --~~~~~~~~---~~~~~--~~---~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~--~~~~~~~ 211 (242)
T 2k2q_B 145 --ELVENKEV---MSFFL--PS---FRSDYRALEQFELYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWA--KDITFHQ 211 (242)
T ss_dssp --TTTHHHHT---TTTCC--SC---HHHHHHHHTCCCCSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTC--CCSEEEE
T ss_pred --HHhcCHHH---HHHHH--HH---HHHHHHHHHhcccCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHh--cCCeEEE
Confidence 00000000 00000 00 11111111000 11256789999999999998864 3344444444 5567888
Q ss_pred ecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++ ||+.++++|+ ++.+.|.+||++.
T Consensus 212 ~~~-gH~~~~e~p~----~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 212 FDG-GHMFLLSQTE----EVAERIFAILNQH 237 (242)
T ss_dssp EEC-CCSHHHHHCH----HHHHHHHHHHHTT
T ss_pred EeC-CceeEcCCHH----HHHHHHHHHhhcc
Confidence 885 9999965554 4999999999753
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=175.35 Aligned_cols=258 Identities=16% Similarity=0.170 Sum_probs=158.0
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCC-cceEEEEecCCC---CCccc-cHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQK-VKATVYMTHGYG---SDTGW-MFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~-~~~~vv~~HG~~---~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
++..++..+...+| .|.+.+|.|.+.. +.|+||++||++ ++... .|..++..|++.||.|+++|+||+|.|++.
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~ 158 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH 158 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCC
Confidence 34556677888888 9999999887543 579999999987 33221 577788999889999999999999766422
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhh-----cCCCceeEEEEccCcccCCCCC
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQ-----SEPNTWTGLIFSAPLFVIPENM 172 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~~v~~~vl~~~~~~~~~~~ 172 (323)
. .......|+.++++++.... + ..+++|+|||+||.+++.++.. +|++ ++++|+++|........
T Consensus 159 ~----~~~~~~~D~~~~~~~v~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~-i~~~il~~~~~~~~~~~ 231 (361)
T 1jkm_A 159 H----PFPSGVEDCLAAVLWVDEHRESLG--LSGVVVQGESGGGNLAIATTLLAKRRGRLDA-IDGVYASIPYISGGYAW 231 (361)
T ss_dssp C----CTTHHHHHHHHHHHHHHHTHHHHT--EEEEEEEEETHHHHHHHHHHHHHHHTTCGGG-CSEEEEESCCCCCCTTS
T ss_pred C----CCCccHHHHHHHHHHHHhhHHhcC--CCeEEEEEECHHHHHHHHHHHHHHhcCCCcC-cceEEEECCcccccccc
Confidence 1 23444566666666665431 2 2289999999999999999988 6766 99999999987642211
Q ss_pred chhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH---HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc
Q 020633 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL---KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
..... .... ...... .... ....... ..+......... ....... .....+..+.
T Consensus 232 ~~~~~-~~~~---~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~-------~~~~~l~~l~- 289 (361)
T 1jkm_A 232 DHERR-LTEL---PSLVEN-----DGYF----IENGGMALLVRAYDPTGEHAED-PIAWPYF-------ASEDELRGLP- 289 (361)
T ss_dssp CHHHH-HHHC---THHHHT-----TTSS----SCHHHHHHHHHHHSSSSTTTTC-TTTCGGG-------CCHHHHTTCC-
T ss_pred ccccc-cccC---cchhhc-----cCcc----cCHHHHHHHHHHhCCCCCCCCC-cccCccc-------cChhhHcCCC-
Confidence 11000 0000 000000 0000 0000011 111100000000 0000000 0012234555
Q ss_pred CEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccc-cCCC-chhH-HHHHHHHHHHHHHHH
Q 020633 250 PFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI-QGEP-DENA-NLVLKDMREWIDERV 315 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~~~-~~~~-~~~~~~i~~fl~~~~ 315 (323)
|+|+++|++|.+++ .++.+.+.+. +.+++++++++++|.+. ...+ .... +++.+.+.+||+++.
T Consensus 290 P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 290 PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999999987 5556666552 34579999999999877 4332 2334 778999999998864
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-24 Score=168.50 Aligned_cols=236 Identities=13% Similarity=0.113 Sum_probs=149.3
Q ss_pred cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+.++.+.|.+.++.|+||++||++ ++.. .|..++..|+. .||.|+++|+|+.+.. .+....+|+.+
T Consensus 66 ~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~--------~~~~~~~D~~~ 136 (322)
T 3fak_A 66 GCAAEWVRAPGCQAGKAILYLHGGGYVMGSIN-THRSMVGEISRASQAAALLLDYRLAPEH--------PFPAAVEDGVA 136 (322)
T ss_dssp TEEEEEEECTTCCTTCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTSEEEEECCCCTTTS--------CTTHHHHHHHH
T ss_pred CeEEEEEeCCCCCCccEEEEEcCCccccCChH-HHHHHHHHHHHhcCCEEEEEeCCCCCCC--------CCCcHHHHHHH
Confidence 6788888887656789999999976 3344 66777788876 4999999999976544 34456688888
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccc
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWA 193 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (323)
+++++... +++..+++|+|||+||.+|+.++...++. .++++|+++|+........... .. .
T Consensus 137 a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~---~~-------~---- 201 (322)
T 3fak_A 137 AYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFK---TR-------A---- 201 (322)
T ss_dssp HHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHH---HT-------T----
T ss_pred HHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHH---Hh-------C----
Confidence 88888766 44567999999999999999999875432 2899999999876543221100 00 0
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 273 (323)
................... ........ ... .....+.. ..|+|+++|+.|.++ ..+..+++.
T Consensus 202 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~s----------p~~~~~~~-~pP~li~~g~~D~~~--~~~~~~~~~ 263 (322)
T 3fak_A 202 --EADPMVAPGGINKMAARYL-NGADAKHP--YAS----------PNFANLKG-LPPLLIHVGRDEVLL--DDSIKLDAK 263 (322)
T ss_dssp --TTCCSCCSSHHHHHHHHHH-TTSCTTCT--TTC----------GGGSCCTT-CCCEEEEEETTSTTH--HHHHHHHHH
T ss_pred --ccCcccCHHHHHHHHHHhc-CCCCCCCc--ccC----------CCcccccC-CChHhEEEcCcCccH--HHHHHHHHH
Confidence 0000000000000001111 00000000 000 01112222 249999999999875 455566655
Q ss_pred cC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHhhc
Q 020633 274 AS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 274 ~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+. +..++++++++++|.+....+ .+..+++.+.+.+||++++...
T Consensus 264 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 264 AKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp HHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 53 346799999999998764332 3456789999999999998643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-25 Score=195.88 Aligned_cols=238 Identities=13% Similarity=0.100 Sum_probs=163.4
Q ss_pred ccceeEEEcCCCcEEEEEecCCC---CCcceEEEEecCCCCCc----cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc
Q 020633 29 RNGKKYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDT----GWMFQKICISFATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 29 ~~~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~HG~~~~~----~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 101 (323)
..+.+.+...+|++.+..+.|.+ .++.|+||++||++++. .|.+......|+++||.|+++|+||+|.+....
T Consensus 467 ~~~~~~~~~~~g~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 467 KVEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp BCCBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred CceEEEEEcCCceEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 35666777777789999998864 25679999999998652 223335566777789999999999999853110
Q ss_pred ---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc----CCCceeEEEEccCcccCCCCCch
Q 020633 102 ---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
.....-....+|+.++++++.....++..+++|+|||+||.+++.++.++ |++ ++++|+++|........ .
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~-~~~~v~~~~~~~~~~~~-~ 624 (723)
T 1xfd_A 547 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQT-FTCGSALSPITDFKLYA-S 624 (723)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCC-CSEEEEESCCCCTTSSB-H
T ss_pred HHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCe-EEEEEEccCCcchHHhh-h
Confidence 00001124568888888888765333356899999999999999999999 888 99999999876543210 0
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCC-cCEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT-VPFLT 253 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~ 253 (323)
.... .... .+.. ....+.... ....+.+++ +|+|+
T Consensus 625 -~~~~-------~~~~----~~~~------------------~~~~~~~~~--------------~~~~~~~~~~~P~li 660 (723)
T 1xfd_A 625 -AFSE-------RYLG----LHGL------------------DNRAYEMTK--------------VAHRVSALEEQQFLI 660 (723)
T ss_dssp -HHHH-------HHHC----CCSS------------------CCSSTTTTC--------------THHHHTSCCSCEEEE
T ss_pred -hccH-------hhcC----CccC------------------ChhHHHhcC--------------hhhHHhhcCCCCEEE
Confidence 0000 0000 0000 000000000 112345677 79999
Q ss_pred EeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++|++|..+|++.++.+++.+. +.++++++++++||.+. ..+..+.+.+.+.+||++++
T Consensus 661 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 661 IHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFT---SSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCC---CHHHHHHHHHHHHHHHTTTT
T ss_pred EEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccc---cCcchHHHHHHHHHHHHHHh
Confidence 9999999999999988888773 34679999999999984 24567789999999998765
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=190.17 Aligned_cols=256 Identities=11% Similarity=0.027 Sum_probs=170.1
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
..+..+++.+...|| +|.+..+.|.+ .++.|+||++||+++... ..|......|+++||.|+++|+||+|.+...
T Consensus 413 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~ 492 (695)
T 2bkl_A 413 EQYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKA 492 (695)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHH
T ss_pred HHCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHH
Confidence 345667788888999 99999988764 256799999999765432 2444455567788999999999999876421
Q ss_pred ---cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 101 ---RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 101 ---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
...........+|+.++++++......+..+++++|||+||.+++.++.++|++ ++++|+.+|..+........
T Consensus 493 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~-~~~~v~~~~~~d~~~~~~~~-- 569 (695)
T 2bkl_A 493 WHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPEL-YGAVVCAVPLLDMVRYHLFG-- 569 (695)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGST--
T ss_pred HHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcc-eEEEEEcCCccchhhccccC--
Confidence 111112345578999999999876545567899999999999999999999998 99999999876543210000
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCC--cCEEEEe
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT--VPFLTVH 255 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~ 255 (323)
....+ . ..+ ..+. ... ....+.... ....+.+++ +|+|+++
T Consensus 570 ------~~~~~---------------------~-~~~-g~~~------~~~-~~~~~~~~s-p~~~~~~~~~~~P~Li~~ 612 (695)
T 2bkl_A 570 ------SGRTW---------------------I-PEY-GTAE------KPE-DFKTLHAYS-PYHHVRPDVRYPALLMMA 612 (695)
T ss_dssp ------TGGGG---------------------H-HHH-CCTT------SHH-HHHHHHHHC-GGGCCCSSCCCCEEEEEE
T ss_pred ------CCcch---------------------H-HHh-CCCC------CHH-HHHHHHhcC-hHhhhhhcCCCCCEEEEe
Confidence 00000 0 000 0000 000 000000000 123445554 6999999
Q ss_pred eCCCcccCchhHHHHHHHcCC-----CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh-cCCCCC
Q 020633 256 GTADGVTCPTSSKLLYEKASS-----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER-YGPKNC 323 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~-~~~~~~ 323 (323)
|++|..+++..++.+++.+.. ..+++++++++||.+. .+.....+....+.+||.+++.. ..++.|
T Consensus 613 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~~fl~~~l~~~~~~~~~ 684 (695)
T 2bkl_A 613 ADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGA--DQVAKAIESSVDLYSFLFQVLDVQGAQGGV 684 (695)
T ss_dssp ETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBC--SCHHHHHHHHHHHHHHHHHHTTC-------
T ss_pred eCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCC--CCHHHHHHHHHHHHHHHHHHcCCCCCCcch
Confidence 999999999999999888743 3478999999999974 12344566788899999998864 233444
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-24 Score=189.79 Aligned_cols=237 Identities=16% Similarity=0.124 Sum_probs=161.3
Q ss_pred ceeEEEcCCCcEEEEEecCCC---CCcceEEEEecCCCCCcc--ccHH-HHHHHHh-hCCcEEEEecCCCCcCCCCCccc
Q 020633 31 GKKYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMFQ-KICISFA-TWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~--~~~~-~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
+...+...+.+|++..+.|.+ +++.|+||++||++++.. ..|. .+...|. ++||.|+++|+||+|.+......
T Consensus 469 ~~~~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~ 548 (719)
T 1z68_A 469 EIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLY 548 (719)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHG
T ss_pred EEEEEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHH
Confidence 445565554589999998865 246789999999987632 1221 2445554 68999999999999998632110
Q ss_pred --CCCh-HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH
Q 020633 104 --LGDM-EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF 180 (323)
Q Consensus 104 --~~~~-~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~ 180 (323)
...+ ....+|+.++++++.....++..+++++|||+||.+++.++.++|++ ++++|+++|........ ..+ .
T Consensus 549 ~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~~~~~~~~~~-~~~-~-- 623 (719)
T 1z68_A 549 AVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGL-FKCGIAVAPVSSWEYYA-SVY-T-- 623 (719)
T ss_dssp GGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSC-CSEEEEESCCCCTTTSB-HHH-H--
T ss_pred HHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCc-eEEEEEcCCccChHHhc-ccc-c--
Confidence 0011 34578889999988875433456899999999999999999999988 99999999876543210 000 0
Q ss_pred HhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc-CEEEEeeCCC
Q 020633 181 MYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV-PFLTVHGTAD 259 (323)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D 259 (323)
..+.. .+. ..... ..+... .....+.++++ |+|+++|++|
T Consensus 624 -----~~~~g----~~~--------~~~~~-~~~~~~---------------------~~~~~~~~~~~~P~li~~G~~D 664 (719)
T 1z68_A 624 -----ERFMG----LPT--------KDDNL-EHYKNS---------------------TVMARAEYFRNVDYLLIHGTAD 664 (719)
T ss_dssp -----HHHHC----CSS--------TTTTH-HHHHHT---------------------CSGGGGGGGTTSEEEEEEETTC
T ss_pred -----hhhcC----Ccc--------cccch-hhhhhC---------------------CHhHHHhcCCCCcEEEEEeCCC
Confidence 00000 000 00000 000000 01234566777 8999999999
Q ss_pred cccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 260 GVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 260 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
..+|++.++.+.+.+. ...+++++++++||.+. .+..+.+.+.+.+||++++
T Consensus 665 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 665 DNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLS----GLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCC----THHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCC----cccHHHHHHHHHHHHHHhh
Confidence 9999999999888773 23467999999999985 4557779999999999876
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-24 Score=189.61 Aligned_cols=252 Identities=13% Similarity=0.030 Sum_probs=164.5
Q ss_pred cccCcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 24 TSQGVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
+...+..+++.+...|| +|.+..+.|.+ .++.|+||++||+++... +.|......|+++||.|+++|+||+|.+...
T Consensus 455 ~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~ 534 (741)
T 1yr2_A 455 DPADFRVEQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDA 534 (741)
T ss_dssp CGGGEEEEEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHH
T ss_pred ChhHCEEEEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHH
Confidence 33455667888899999 99999998875 467899999999876542 2455566678889999999999999887421
Q ss_pred c---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 101 R---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 101 ~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
. .....-....+|+.++++++......+..+++++|+|+||.+++.++.++|++ ++++|+.+|..+........
T Consensus 535 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~-~~~~v~~~~~~d~~~~~~~~-- 611 (741)
T 1yr2_A 535 WHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDL-FAAASPAVGVMDMLRFDQFT-- 611 (741)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTSGGGST--
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchh-heEEEecCCccccccccCCC--
Confidence 1 00001234568888888888776444577999999999999999999999998 99999999876543210000
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC-CCc-CEEEEe
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK-VTV-PFLTVH 255 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-P~l~i~ 255 (323)
....+...+ ... .+......+.... ....+.. +++ |+|+++
T Consensus 612 ------~~~~~~~~~---------g~~-~~~~~~~~~~~~s---------------------p~~~~~~~~~~~P~Li~~ 654 (741)
T 1yr2_A 612 ------AGRYWVDDY---------GYP-EKEADWRVLRRYS---------------------PYHNVRSGVDYPAILVTT 654 (741)
T ss_dssp ------TGGGGHHHH---------CCT-TSHHHHHHHHTTC---------------------GGGCCCTTSCCCEEEEEE
T ss_pred ------CCchhHHHc---------CCC-CCHHHHHHHHHcC---------------------chhhhhccCCCCCEEEEe
Confidence 000000000 000 0001111110000 1234454 675 999999
Q ss_pred eCCCcccCchhHHHHHHHcCC-----CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 256 GTADGVTCPTSSKLLYEKASS-----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++|..+++..+..+.+.+.. ..+++++++++||.+.. +.....+....+.+||.+++..
T Consensus 655 G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~ 719 (741)
T 1yr2_A 655 ADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGK--PIDKQIEETADVQAFLAHFTGL 719 (741)
T ss_dssp CSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC-----------CHHHHHHHHHHHHHHHHHHHTC
T ss_pred eCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCC--CHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999888887732 23788999999999762 2233457889999999998864
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-25 Score=174.15 Aligned_cols=247 Identities=10% Similarity=0.053 Sum_probs=155.5
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~ 100 (323)
.++..++..+...+| .|.++.|.|.+ ++.|+||++||+| ++.. .+..++..|+. .||.|+++|+|+.+..
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~-~~~p~vv~~HGgG~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~--- 130 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP-TPAPVVVYCHAGGFALGNLD-TDHRQCLELARRARCAVVSVDYRLAPEH--- 130 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC-SSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC-CCCcEEEEECCCcCccCChH-HHHHHHHHHHHHcCCEEEEecCCCCCCC---
Confidence 456678888999999 99999999976 6789999999887 3444 67778888874 4999999999977654
Q ss_pred cccCCChHHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCch
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~ 174 (323)
.+....+|+.++++++... .+++..+++|+|||+||.+|+.++...+++ .++++++++|..... .. .
T Consensus 131 -----~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~-~ 203 (317)
T 3qh4_A 131 -----PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PT-A 203 (317)
T ss_dssp -----CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CC-H
T ss_pred -----CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CC-c
Confidence 2344556777777766553 223355899999999999999999875432 289999999987654 11 1
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
.. .... ............................+. ....+.. -.|++++
T Consensus 204 ~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------------~~~~l~~-lpP~li~ 253 (317)
T 3qh4_A 204 SR--SEFR--------------ATPAFDGEAASLMWRHYLAGQTPSPESVPG-------------RRGQLAG-LPATLIT 253 (317)
T ss_dssp HH--HHTT--------------TCSSSCHHHHHHHHHHHHTTCCCCTTTCGG-------------GCSCCTT-CCCEEEE
T ss_pred CH--HHhc--------------CCCCcCHHHHHHHHHHhcCCCCCCcccCCC-------------cccccCC-CCceeEE
Confidence 00 0000 000000000000000001000000000000 0011222 2399999
Q ss_pred eeCCCcccCchhHHHHHHHc--CCCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHh
Q 020633 255 HGTADGVTCPTSSKLLYEKA--SSADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVE 316 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+.|.+++ ....+.+.+ .+.+++++++++++|.+....+ .+..+++.+.+.+||++++.
T Consensus 254 ~G~~D~~~~--~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 254 CGEIDPFRD--EVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp EEEESTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred ecCcCCCch--hHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 999999876 233333333 1357899999999998653322 25677899999999998864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-25 Score=169.54 Aligned_cols=198 Identities=21% Similarity=0.170 Sum_probs=143.6
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCC------CCcCCCCC---------ccc
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLL------GHGRSDGI---------RCY 103 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~------G~G~s~~~---------~~~ 103 (323)
.+.|....+..+++.|+|||+||+|++.. .|..+++.|..+ ++.+++++-| |.|.+--. ...
T Consensus 52 ~l~y~~~p~~~~~~~plVI~LHG~G~~~~-~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~ 130 (285)
T 4fhz_A 52 KLTFGRRGAAPGEATSLVVFLHGYGADGA-DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAA 130 (285)
T ss_dssp CCCEEEEESCTTCCSEEEEEECCTTBCHH-HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHH
T ss_pred cceeecCCCCCCCCCcEEEEEcCCCCCHH-HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchh
Confidence 46666666666577899999999998876 677788888764 7888888754 33332100 000
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
...+...++++.++++.+..+.+++..+++++|+|+||.+++.++.++|+. +.++|.+++......
T Consensus 131 ~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~-~a~vv~~sG~l~~~~------------- 196 (285)
T 4fhz_A 131 AEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEE-IAGIVGFSGRLLAPE------------- 196 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSC-CSEEEEESCCCSCHH-------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCccc-CceEEEeecCccCch-------------
Confidence 001333456777788887777777788999999999999999999999999 999998876432100
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
........++|++++||++|.+||
T Consensus 197 --------------------------------------------------------~~~~~~~~~~Pvl~~hG~~D~~Vp 220 (285)
T 4fhz_A 197 --------------------------------------------------------RLAEEARSKPPVLLVHGDADPVVP 220 (285)
T ss_dssp --------------------------------------------------------HHHHHCCCCCCEEEEEETTCSSSC
T ss_pred --------------------------------------------------------hhhhhhhhcCcccceeeCCCCCcC
Confidence 000112346899999999999999
Q ss_pred chhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 264 PTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 264 ~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
.+.++++.+.+. +.+++++++++.||.+. .+ ..+.+.+||++++..
T Consensus 221 ~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~----~~----~l~~~~~fL~~~Lpd 268 (285)
T 4fhz_A 221 FADMSLAGEALAEAGFTTYGHVMKGTGHGIA----PD----GLSVALAFLKERLPD 268 (285)
T ss_dssp THHHHHHHHHHHHTTCCEEEEEETTCCSSCC----HH----HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCC----HH----HHHHHHHHHHHHCcC
Confidence 999888887763 34578999999999875 33 467899999998853
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-24 Score=186.46 Aligned_cols=253 Identities=12% Similarity=0.026 Sum_probs=167.1
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
...+..+++.++..|| +|.+.++.|.+ .++.|+||++||+.+.. ...|......|+++||.|+++|+||.|....
T Consensus 420 ~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~ 499 (693)
T 3iuj_A 420 PEDYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQ 499 (693)
T ss_dssp GGGEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCH
T ss_pred hhhCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCH
Confidence 3345667788899999 99999998764 25679999999986542 2356666678888999999999999987642
Q ss_pred Cc---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh
Q 020633 100 IR---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~ 176 (323)
.. ..........+|+.++++++......+..+++++|+|+||++++.++.++|++ ++++|+..|..+........
T Consensus 500 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~-~~a~v~~~~~~d~~~~~~~~- 577 (693)
T 3iuj_A 500 AWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDL-MRVALPAVGVLDMLRYHTFT- 577 (693)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCCTTTGGGSG-
T ss_pred HHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccc-eeEEEecCCcchhhhhccCC-
Confidence 11 11112234568899999998877545567999999999999999999999999 99999999877643210000
Q ss_pred HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC-CCcC-EEEE
Q 020633 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK-VTVP-FLTV 254 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P-~l~i 254 (323)
....+.. .+ ..+ .........+.... ....+.+ +++| +|++
T Consensus 578 -------~~~~~~~----------------------~~-g~p------~~~~~~~~~~~~~s-p~~~~~~~~~~Pp~Li~ 620 (693)
T 3iuj_A 578 -------AGTGWAY----------------------DY-GTS------ADSEAMFDYLKGYS-PLHNVRPGVSYPSTMVT 620 (693)
T ss_dssp -------GGGGCHH----------------------HH-CCT------TSCHHHHHHHHHHC-HHHHCCTTCCCCEEEEE
T ss_pred -------CchhHHH----------------------Hc-CCc------cCHHHHHHHHHhcC-HHHhhcccCCCCceeEE
Confidence 0000000 00 000 00000011111111 2345566 7888 9999
Q ss_pred eeCCCcccCchhHHHHHHHcCC-----CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 255 HGTADGVTCPTSSKLLYEKASS-----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+|++|..|++..+..+++.+.. ..+++++++++||.+.. +.....+....+.+||.+++...
T Consensus 621 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 621 TADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGT--PVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp EESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------C--HHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcc--cHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999888887732 34688999999999761 12445668889999999998654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=182.30 Aligned_cols=252 Identities=10% Similarity=-0.012 Sum_probs=172.4
Q ss_pred cccCcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHH-HHHhhCCcEEEEecCCCCcCC
Q 020633 24 TSQGVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKIC-ISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s 97 (323)
+...+..+++.+++.|| +|.+.++.|.+ .++.|+||++||+++.. ...|.... +.|+++||.|+.+|+||+|.+
T Consensus 443 ~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~ 522 (711)
T 4hvt_A 443 DSENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEF 522 (711)
T ss_dssp CGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTT
T ss_pred CcccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCc
Confidence 34455667888999999 99999998865 25689999999986543 22343333 578889999999999999876
Q ss_pred CCCc---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 98 DGIR---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 98 ~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
.... ..........+|+.++++++......+..+++++|+|+||.+++.++.++|++ ++++|+.+|..++......
T Consensus 523 G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~-f~a~V~~~pv~D~~~~~~~ 601 (711)
T 4hvt_A 523 GPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPEL-FGAVACEVPILDMIRYKEF 601 (711)
T ss_dssp CHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGS
T ss_pred chhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCc-eEEEEEeCCccchhhhhcc
Confidence 4211 11112345568899999999877656677999999999999999999999998 9999999987764321100
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc--CEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV--PFL 252 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~l 252 (323)
. ....+...+ ... ..+.. ...+... .....+.++++ |+|
T Consensus 602 ~--------~~~~~~~~~---------G~p-~~~~~--------------------~~~l~~~-SP~~~v~~i~~~pPvL 642 (711)
T 4hvt_A 602 G--------AGHSWVTEY---------GDP-EIPND--------------------LLHIKKY-APLENLSLTQKYPTVL 642 (711)
T ss_dssp T--------TGGGGHHHH---------CCT-TSHHH--------------------HHHHHHH-CGGGSCCTTSCCCEEE
T ss_pred c--------cchHHHHHh---------CCC-cCHHH--------------------HHHHHHc-CHHHHHhhcCCCCCEE
Confidence 0 000000000 000 00000 0001100 02345566776 999
Q ss_pred EEeeCCCcccCchhHHHHHHHc-CC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKA-SS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+++|++|..||+..+..+++.+ .. ..+++++++++||.+.. +..........+.+||.++++.
T Consensus 643 ii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~--~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 643 ITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGS--DLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp EEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCS--SHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcC--CcchHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998888 43 34789999999999752 2333455677889999998853
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=167.48 Aligned_cols=220 Identities=11% Similarity=0.057 Sum_probs=142.4
Q ss_pred CcceEEEEecCC--CCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGY--GSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~--~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+++|||+||+ +++.. .|..++..| ..+|.|+++|+||||.+.... .+++.+++++.+.++.+.. ..
T Consensus 79 ~~~~~lv~lhG~~~~~~~~-~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~---~~~~~~~~~~~~~l~~~~~-----~~ 148 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQ-VYSRLAEEL-DAGRRVSALVPPGFHGGQALP---ATLTVLVRSLADVVQAEVA-----DG 148 (319)
T ss_dssp CSSCEEEEECCSSTTCSGG-GGHHHHHHH-CTTSEEEEEECTTSSTTCCEE---SSHHHHHHHHHHHHHHHHT-----TS
T ss_pred CCCCeEEEECCCCcCCCHH-HHHHHHHHh-CCCceEEEeeCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcC-----CC
Confidence 447899999996 44445 899999999 567999999999999876443 3789999999998887753 24
Q ss_pred CeEEEEechhHHHHHHHhhhc---CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCC
Q 020633 131 PGFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKD 207 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (323)
+++|+||||||.+|+.+|.++ |++ |+++|++++................+.. ......
T Consensus 149 ~~~lvGhS~Gg~vA~~~A~~~~~~~~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------- 209 (319)
T 3lcr_A 149 EFALAGHSSGGVVAYEVARELEARGLA-PRGVVLIDSYSFDGDGGRPEELFRSALN---ERFVEY--------------- 209 (319)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCC-CSCEEEESCCCCCSSCCHHHHHHHHHHH---HHHHHH---------------
T ss_pred CEEEEEECHHHHHHHHHHHHHHhcCCC-ccEEEEECCCCCCccchhhHHHHHHHHH---HHHhhh---------------
Confidence 899999999999999999987 777 9999999876543321001100010000 000000
Q ss_pred hHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC
Q 020633 208 PEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
..+.... ........+....... ......+++|+|+|+|++ ..+++.....+.+.+. ...+++++++
T Consensus 210 ----~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~-~~~~~~~~~g 277 (319)
T 3lcr_A 210 ----LRLTGGG------NLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLA-AMGQVVEAPG 277 (319)
T ss_dssp ----HHHHCCC------CHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHH-TCSEEEEESS
T ss_pred ----hcccCCC------chhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCC-CCceEEEeCC
Confidence 0000000 0000011111111101 112257899999999998 5666677777777763 3467888885
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 287 MYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+.+++. +..+++.+.|.+||.+...
T Consensus 278 -~H~~~~~~--~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 278 -DHFTIIEG--EHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp -CTTGGGST--TTHHHHHHHHHHHHHHHHC
T ss_pred -CcHHhhCc--ccHHHHHHHHHHHHHhccc
Confidence 78877541 2466799999999988754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=186.77 Aligned_cols=250 Identities=12% Similarity=0.044 Sum_probs=169.0
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCc-cccHHHHHHHHhh-CCcEEEEecCCCCcCCCC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDT-GWMFQKICISFAT-WGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~ 99 (323)
..+..+++.+...|| +|.+..+.|.+ .++.|+||++||+++.. .+.|......|++ +||.|+++|+||+|.+..
T Consensus 433 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~ 512 (710)
T 2xdw_A 433 SDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGE 512 (710)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHH
T ss_pred cccEEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCCh
Confidence 345667788899999 99999998764 25679999999987553 2245444556767 899999999999987642
Q ss_pred Cc---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh
Q 020633 100 IR---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~ 176 (323)
.. ..........+|+.++++++......+..+++++|||+||.+++.++.++|++ ++++|+.+|..+........
T Consensus 513 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~-~~~~v~~~~~~d~~~~~~~~- 590 (710)
T 2xdw_A 513 TWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDL-FGCVIAQVGVMDMLKFHKYT- 590 (710)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGST-
T ss_pred HHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccc-eeEEEEcCCcccHhhccccC-
Confidence 11 00012234568888888888776444567999999999999999999999998 99999999876543211000
Q ss_pred HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC-----CCCc-C
Q 020633 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS-----KVTV-P 250 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-P 250 (323)
....+...+ ... ..... ........ ....+. ++++ |
T Consensus 591 -------~~~~~~~~~---------g~~-~~~~~--------------------~~~~~~~s-p~~~~~~~~~~~~~~pP 632 (710)
T 2xdw_A 591 -------IGHAWTTDY---------GCS-DSKQH--------------------FEWLIKYS-PLHNVKLPEADDIQYPS 632 (710)
T ss_dssp -------TGGGGHHHH---------CCT-TSHHH--------------------HHHHHHHC-GGGCCCCCSSTTCCCCE
T ss_pred -------CChhHHHhC---------CCC-CCHHH--------------------HHHHHHhC-cHhhhcccccccCCCCc
Confidence 000000000 000 00000 00000000 123445 6776 9
Q ss_pred EEEEeeCCCcccCchhHHHHHHHcC---------CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 251 FLTVHGTADGVTCPTSSKLLYEKAS---------SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|+++|++|..+++..+..+.+.+. +..+++++++++||.+.. +.....+....+.+||.+++..
T Consensus 633 ~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 633 MLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGK--PTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTC--CHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCC--CHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999888887763 234588999999999862 2234567889999999998753
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.4e-24 Score=165.74 Aligned_cols=226 Identities=13% Similarity=0.124 Sum_probs=138.4
Q ss_pred cCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHH---HHHHhhCCcEEEEecC--CCCcCCCCC--------
Q 020633 37 TPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKI---CISFATWGYAVFAADL--LGHGRSDGI-------- 100 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~---~~~l~~~g~~v~~~d~--~G~G~s~~~-------- 100 (323)
...| .+.+.+|.|.+ .++.|+||++||++++.. .|... .+.++++||.|+++|+ ||+|.+...
T Consensus 24 ~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~ 102 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTG 102 (282)
T ss_dssp TTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCC
T ss_pred hhcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCC
Confidence 4456 89999999875 356799999999998776 56554 5777788999999999 766653311
Q ss_pred -----cccCCC-------hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 101 -----RCYLGD-------MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 101 -----~~~~~~-------~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
...... ....++++..+ +....+++..+++|+|||+||.+|+.++.++|+. ++++++++|....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~s~~~~~ 178 (282)
T 3fcx_A 103 AGFYVDATEDPWKTNYRMYSYVTEELPQL---INANFPVDPQRMSIFGHSMGGHGALICALKNPGK-YKSVSAFAPICNP 178 (282)
T ss_dssp CCTTCBCCSTTHHHHCBHHHHHHTHHHHH---HHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTT-SSCEEEESCCCCG
T ss_pred cccccccCcccccchhhHHHHHHHHHHHH---HHHHcCCCccceEEEEECchHHHHHHHHHhCccc-ceEEEEeCCccCc
Confidence 000001 11123344443 3333333346899999999999999999999998 9999999987653
Q ss_pred CCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 020633 169 PENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT 248 (323)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (323)
... .+....+.. .. ......... . ........+..+.
T Consensus 179 ~~~---~~~~~~~~~----~~-------------------------~~~~~~~~~----~-------~~~~~~~~~~~~~ 215 (282)
T 3fcx_A 179 VLC---PWGKKAFSG----YL-------------------------GTDQSKWKA----Y-------DATHLVKSYPGSQ 215 (282)
T ss_dssp GGS---HHHHHHHHH----HH-------------------------C---CCGGG----G-------CHHHHHTTCC---
T ss_pred ccC---chhHHHHHH----hc-------------------------CCchhhhhh----c-------CHHHHHHhcccCC
Confidence 221 111110000 00 000000000 0 0001234455668
Q ss_pred cCEEEEeeCCCcccCchh--HHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 249 VPFLTVHGTADGVTCPTS--SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|+++++|++|.++|... .+.+.+.+. +.+++++++++++|.+. ..........+|+.+.+.
T Consensus 216 ~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 216 LDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYY------FIATFITDHIRHHAKYLN 281 (282)
T ss_dssp CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHH------HHHhhhHHHHHHHHHhhc
Confidence 999999999999986544 334444432 34679999999999876 244466777778777654
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=164.68 Aligned_cols=230 Identities=14% Similarity=0.106 Sum_probs=145.3
Q ss_pred ceeEEEc-CCC-cEEEEEecCCC---CCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 31 GKKYFET-PNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 31 ~~~~~~~-~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
+...+.+ .+| ++.+.+|.|.+ .++.|+||++||++++.. .|.. +...+.+.|+.|+++|.+++|.+.....
T Consensus 18 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~ 96 (280)
T 3i6y_A 18 KQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDE-NFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDE 96 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSS-HHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCS
T ss_pred EEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChh-HHhhcccHHHHHhhCCeEEEEeCCcccccccCccc
Confidence 4444444 466 89999999875 467899999999998766 5544 4456666799999999998776532211
Q ss_pred c--------------------CCC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE
Q 020633 103 Y--------------------LGD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 103 ~--------------------~~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl 161 (323)
. ... .+...+++..+++..... ..+++|+|||+||.+|+.++.++|+. ++++++
T Consensus 97 ~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~ 171 (280)
T 3i6y_A 97 GYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV----SDKRAIAGHSMGGHGALTIALRNPER-YQSVSA 171 (280)
T ss_dssp STTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE----EEEEEEEEETHHHHHHHHHHHHCTTT-CSCEEE
T ss_pred ccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC----CCCeEEEEECHHHHHHHHHHHhCCcc-ccEEEE
Confidence 0 001 222345555555433211 24899999999999999999999999 999999
Q ss_pred ccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH
Q 020633 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|....... .+....+...+. ........ . +... ..
T Consensus 172 ~s~~~~~~~~---~~~~~~~~~~~~-----------------------------~~~~~~~~----~---~~~~----~~ 208 (280)
T 3i6y_A 172 FSPINNPVNC---PWGQKAFTAYLG-----------------------------KDTDTWRE----Y---DASL----LM 208 (280)
T ss_dssp ESCCCCGGGS---HHHHHHHHHHHC-----------------------------SCGGGTGG----G---CHHH----HH
T ss_pred eCCccccccC---chHHHHHHHhcC-----------------------------CchHHHHh----c---CHHH----HH
Confidence 9987653221 110010000000 00000000 0 0000 11
Q ss_pred hcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 242 DNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+.. .+|+++++|++|.+++.+. .+.+.+.+. +.+++++++++++|... ......+.+.+|+.+++.
T Consensus 209 ~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 209 RAAKQ-YVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYY------FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHCSS-CCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHHT
T ss_pred HhcCC-CccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHH------HHHHhHHHHHHHHHhhcc
Confidence 11111 5899999999999998743 555555552 34579999999999875 345577888889888764
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=167.33 Aligned_cols=234 Identities=14% Similarity=0.194 Sum_probs=142.6
Q ss_pred CC-cEEEEEecCCCCCcceE-EEEecCCC---CCccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 39 NG-KLFTQSFLPLDQKVKAT-VYMTHGYG---SDTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~-vv~~HG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
+| ++ + .|.+..++++ ||++||++ ++.. .|..++..|+.. ||.|+++|+|+.+.+. +....+
T Consensus 66 ~g~~~-~---~p~~~~~~~~~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~dyr~~~~~~--------~~~~~~ 132 (322)
T 3k6k_A 66 GGVPC-I---RQATDGAGAAHILYFHGGGYISGSPS-THLVLTTQLAKQSSATLWSLDYRLAPENP--------FPAAVD 132 (322)
T ss_dssp TTEEE-E---EEECTTCCSCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTCEEEEECCCCTTTSC--------TTHHHH
T ss_pred CCEeE-E---ecCCCCCCCeEEEEEcCCcccCCChH-HHHHHHHHHHHhcCCEEEEeeCCCCCCCC--------CchHHH
Confidence 67 66 3 2322244566 99999976 4445 677888888765 9999999999887653 334567
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
|+.++++++... .++..+++|+|||+||.+|+.++...++. .++++|+++|+........... ....
T Consensus 133 d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~---~~~~------ 202 (322)
T 3k6k_A 133 DCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNS---NLAD------ 202 (322)
T ss_dssp HHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHH---HTGG------
T ss_pred HHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchh---hccC------
Confidence 777777777655 23366999999999999999999875542 2899999999876543221100 0000
Q ss_pred cccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHH
Q 020633 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKL 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 269 (323)
. ......... ......+............. ....+. ...|+|+++|++|.++ ..+..
T Consensus 203 -~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~sp------------~~~~~~-~~pP~li~~G~~D~~~--~~~~~ 259 (322)
T 3k6k_A 203 -R------DFLAEPDTL-GEMSELYVGGEDRKNPLISP------------VYADLS-GLPEMLIHVGSEEALL--SDSTT 259 (322)
T ss_dssp -G------CSSSCHHHH-HHHHHHHHTTSCTTCTTTCG------------GGSCCT-TCCCEEEEEESSCTTH--HHHHH
T ss_pred -C------CCcCCHHHH-HHHHHHhcCCCCCCCCcCCc------------cccccc-CCCcEEEEECCcCccH--HHHHH
Confidence 0 000000000 00000000000000000000 011112 2369999999999874 45566
Q ss_pred HHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHHhhc
Q 020633 270 LYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 270 ~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.+.+. +.+++++++++++|.+....+ .+..+++.+.+.+||++++...
T Consensus 260 ~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 260 LAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhcc
Confidence 655552 346799999999998874433 3457789999999999987643
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=170.31 Aligned_cols=220 Identities=15% Similarity=0.131 Sum_probs=146.0
Q ss_pred eEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCC---CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 33 KYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
..+... + .+.+..|.|.+ .++.|+||++||++ ++.. .|..++..|+++||.|+++|+||+|.+ +.
T Consensus 59 ~~i~y~-~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~r~~~~~--------~~ 128 (303)
T 4e15_A 59 DHLRYG-EGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMS-MSCSIVGPLVRRGYRVAVMDYNLCPQV--------TL 128 (303)
T ss_dssp EEEECS-STTCEEEEEECTTCCTTCCEEEEECCSTTTSCCGG-GSCTTHHHHHHTTCEEEEECCCCTTTS--------CH
T ss_pred eeeccC-CCCcEEEEEecCCCCCCCCEEEEECCCcCcCCChh-HHHHHHHHHHhCCCEEEEecCCCCCCC--------Ch
Confidence 334444 5 66677777643 35689999999954 3333 566778889999999999999999865 45
Q ss_pred HHHhhcHHHHHHHHHh---cCCCCCCCeEEEEechhHHHHHHHhhhcCC-------CceeEEEEccCcccCCCCCchhhH
Q 020633 108 EKVAASSLSFFKHVRD---SEPYRDLPGFLFGESMGGAATMLMYFQSEP-------NTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-------~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
....+|+.++++++.. ..+ ..+++|+|||+||.+++.++.+.+. + ++++|+++|.......
T Consensus 129 ~~~~~d~~~~~~~l~~~~~~~~--~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~-v~~~v~~~~~~~~~~~------ 199 (303)
T 4e15_A 129 EQLMTQFTHFLNWIFDYTEMTK--VSSLTFAGHXAGAHLLAQILMRPNVITAQRSKM-VWALIFLCGVYDLREL------ 199 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT--CSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHT-EEEEEEESCCCCCHHH------
T ss_pred hHHHHHHHHHHHHHHHHhhhcC--CCeEEEEeecHHHHHHHHHHhccccccCccccc-ccEEEEEeeeeccHhh------
Confidence 6677888888887765 222 5689999999999999999986543 4 9999999987653210
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC----CCcCEEE
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK----VTVPFLT 253 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P~l~ 253 (323)
......... ..+.. ......... .....+.. +.+|+|+
T Consensus 200 ----~~~~~~~~~--------~~~~~-------------~~~~~~~~s-------------p~~~~~~~~~~~~~~P~li 241 (303)
T 4e15_A 200 ----SNLESVNPK--------NILGL-------------NERNIESVS-------------PMLWEYTDVTVWNSTKIYV 241 (303)
T ss_dssp ----HTCTTTSGG--------GTTCC-------------CTTTTTTTC-------------GGGCCCCCGGGGTTSEEEE
T ss_pred ----hcccccchh--------hhhcC-------------CHHHHHHcC-------------chhhcccccccCCCCCEEE
Confidence 000000000 00000 000000000 00122333 3899999
Q ss_pred EeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|++|..++.+.++.+.+.+. +.+++++++++++|+.+++.... ....+.+||.+
T Consensus 242 i~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~~l~~ 299 (303)
T 4e15_A 242 VAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAI----DDSDVSRFLRN 299 (303)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGS----TTSHHHHHHHH
T ss_pred EEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhC----CCcHHHHHHHH
Confidence 9999999999999999988874 23679999999999888655544 44455555543
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=166.60 Aligned_cols=231 Identities=13% Similarity=0.058 Sum_probs=137.5
Q ss_pred cEEEEEecCCCCCcceEEEEecCCC---CCccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYG---SDTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.+.++.+.|.+ .+.|+||++||++ ++.. .|..++..|+. .||.|+++|+||.+.. .+....+|+.+
T Consensus 83 ~~~~~~~~p~~-~~~p~vv~lHGgg~~~~~~~-~~~~~~~~la~~~g~~vi~~D~r~~~~~--------~~~~~~~d~~~ 152 (326)
T 3d7r_A 83 DMQVFRFNFRH-QIDKKILYIHGGFNALQPSP-FHWRLLDKITLSTLYEVVLPIYPKTPEF--------HIDDTFQAIQR 152 (326)
T ss_dssp TEEEEEEESTT-CCSSEEEEECCSTTTSCCCH-HHHHHHHHHHHHHCSEEEEECCCCTTTS--------CHHHHHHHHHH
T ss_pred CEEEEEEeeCC-CCCeEEEEECCCcccCCCCH-HHHHHHHHHHHHhCCEEEEEeCCCCCCC--------CchHHHHHHHH
Confidence 35555566654 5679999999965 2444 67778888874 4999999999986542 34445566666
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhh-HHHHHhhhhhhhhccc
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSK-LHLFMYGLLFGLADTW 192 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 192 (323)
+++++.... +..+++|+|||+||.+|+.++.++|++ .++++|+++|+........... ......
T Consensus 153 ~~~~l~~~~--~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~---------- 220 (326)
T 3d7r_A 153 VYDQLVSEV--GHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQD---------- 220 (326)
T ss_dssp HHHHHHHHH--CGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHC----------
T ss_pred HHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccC----------
Confidence 666664432 245899999999999999999876432 2899999999765432211100 000000
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
........ ......+............. ....+.. -+|+|+++|++|..++ ....+.+
T Consensus 221 ------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~P~lii~G~~D~~~~--~~~~~~~ 278 (326)
T 3d7r_A 221 ------AVLSQFGV-NEIMKKWANGLPLTDKRISP------------INGTIEG-LPPVYMFGGGREMTHP--DMKLFEQ 278 (326)
T ss_dssp ------SSCCHHHH-HHHHHHHHTTSCTTSTTTSG------------GGSCCTT-CCCEEEEEETTSTTHH--HHHHHHH
T ss_pred ------cccCHHHH-HHHHHHhcCCCCCCCCeECc------------ccCCccc-CCCEEEEEeCcccchH--HHHHHHH
Confidence 00000000 00000000000000000000 0112222 2599999999997543 3444444
Q ss_pred HcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 273 KAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 273 ~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
.+. ..+++++++++++|.+.+.. .+..+++.+.|.+||++++.
T Consensus 279 ~l~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 279 MMLQHHQYIEFYDYPKMVHDFPIYP-IRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp HHHHTTCCEEEEEETTCCTTGGGSS-SHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHCCCcEEEEEeCCCcccccccC-CHHHHHHHHHHHHHHHHHhh
Confidence 332 35689999999999988532 45677899999999987653
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-23 Score=161.52 Aligned_cols=231 Identities=13% Similarity=0.127 Sum_probs=144.3
Q ss_pred ceeEEEc-CCC-cEEEEEecCCC---CCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 31 GKKYFET-PNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 31 ~~~~~~~-~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
+...+.+ ..| ++.+.+|.|.+ .++.|+||++||++++.. .|.. +...+.+.|+.|+++|.+++|.+.....
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~ 94 (280)
T 3ls2_A 16 KQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDE-NFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNED 94 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCS
T ss_pred EEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChh-hhhcchhHHHHHhhCCeEEEEeCCccccccccccc
Confidence 3444444 467 89999999875 356799999999988765 5544 4556666799999999987776532110
Q ss_pred c--------------------CCC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEE
Q 020633 103 Y--------------------LGD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIF 161 (323)
Q Consensus 103 ~--------------------~~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl 161 (323)
. ... .+...+++..+++..... ..+++|+|||+||.+|+.++.++|+. ++++++
T Consensus 95 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~G~S~GG~~a~~~a~~~p~~-~~~~~~ 169 (280)
T 3ls2_A 95 SYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV----TSTKAISGHSMGGHGALMIALKNPQD-YVSASA 169 (280)
T ss_dssp CTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE----EEEEEEEEBTHHHHHHHHHHHHSTTT-CSCEEE
T ss_pred ccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCC----CCCeEEEEECHHHHHHHHHHHhCchh-heEEEE
Confidence 0 001 223345555555543211 24899999999999999999999999 999999
Q ss_pred ccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHH
Q 020633 162 SAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
++|....... .+........+. .....+.. . +.. . ..
T Consensus 170 ~s~~~~~~~~---~~~~~~~~~~~g-----------------------------~~~~~~~~----~---~~~---~-~~ 206 (280)
T 3ls2_A 170 FSPIVNPINC---PWGVKAFTGYLG-----------------------------ADKTTWAQ----Y---DSC---K-LM 206 (280)
T ss_dssp ESCCSCGGGS---HHHHHHHHHHHC-----------------------------SCGGGTGG----G---CHH---H-HH
T ss_pred ecCccCcccC---cchhhHHHhhcC-----------------------------chHHHHHh----c---CHH---H-HH
Confidence 9987653221 111000000000 00000000 0 000 0 11
Q ss_pred hcCC-CCCcCEEEEeeCCCcccCchh-HHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 242 DNFS-KVTVPFLTVHGTADGVTCPTS-SKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 242 ~~~~-~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..+. .+.+|+++++|++|.+++.+. .+.+.+.+. +.+++++++++++|.+. ........+.+|+.++++
T Consensus 207 ~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 207 AKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYF------FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHH------HHHHHHHHHHHHHHHHHC
T ss_pred HhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchh------hHHHHHHHHHHHHHHHhc
Confidence 1111 136799999999999999743 455544442 34679999999999875 244567778889988764
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-24 Score=167.46 Aligned_cols=211 Identities=14% Similarity=0.075 Sum_probs=134.8
Q ss_pred CcceEEEEecCCCCCc--cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHH-HHHHhcCCCCC
Q 020633 53 KVKATVYMTHGYGSDT--GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFF-KHVRDSEPYRD 129 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l-~~l~~~~~~~~ 129 (323)
..+++|||+||++++. . .|..+...|... |.|+++|+||||.|... ..+++++++++.+.+ +.+. .
T Consensus 65 ~~~~~lvllhG~~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~---~~~~~~~a~~~~~~l~~~~~------~ 133 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPH-EFTRLAGALRGI-APVRAVPQPGYEEGEPL---PSSMAAVAAVQADAVIRTQG------D 133 (300)
T ss_dssp SCSSEEEECCCSSTTCSTT-TTHHHHHHTSSS-CCBCCCCCTTSSTTCCB---CSSHHHHHHHHHHHHHHHCS------S
T ss_pred CCCCeEEEECCCcccCcHH-HHHHHHHhcCCC-ceEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcC------C
Confidence 5578999999999876 5 889999988754 99999999999998653 248888888887543 4333 3
Q ss_pred CCeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccC
Q 020633 130 LPGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIK 206 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (323)
.+++|+||||||.+++.+|.++|+ + |+++|++++....... ....+ .......+..... ...
T Consensus 134 ~~~~LvGhS~GG~vA~~~A~~~p~~g~~-v~~lvl~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~-----~~~- 198 (300)
T 1kez_A 134 KPFVVAGHSAGALMAYALATELLDRGHP-PRGVVLIDVYPPGHQD-----AMNAW---LEELTATLFDRET-----VRM- 198 (300)
T ss_dssp CCEEEECCTHHHHHHHHHHHHTTTTTCC-CSEEECBTCCCTTTCH-----HHHHH---HHHHHGGGCCCCS-----SCC-
T ss_pred CCEEEEEECHhHHHHHHHHHHHHhcCCC-ccEEEEECCCCCcchh-----HHHHH---HHHHHHHHHhCcC-----Ccc-
Confidence 489999999999999999999884 6 9999999987543220 01111 0111100000000 000
Q ss_pred ChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH-HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEec
Q 020633 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI-QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYD 285 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (323)
.. .....+....... .....++++|+++|+|+ |..+++.. ..+.+.+ ..+.++++++
T Consensus 199 ~~-------------------~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~-~~~~~~~~i~ 256 (300)
T 1kez_A 199 DD-------------------TRLTALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTW-PFEHDTVAVP 256 (300)
T ss_dssp CH-------------------HHHHHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCC-SSCCEEEEES
T ss_pred ch-------------------HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhc-CCCCeEEEec
Confidence 00 0000000000000 11346789999999995 55565544 2233333 1357899999
Q ss_pred CCCccccc-CCCchhHHHHHHHHHHHHHHHHh
Q 020633 286 GMYHSLIQ-GEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 286 ~~gH~~~~-~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+ ||+.++ ++++. +.+.|.+||.+...
T Consensus 257 g-gH~~~~~e~~~~----~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 257 G-DHFTMVQEHADA----IARHIDAWLGGGNS 283 (300)
T ss_dssp S-CTTTSSSSCSHH----HHHHHHHHHTCC--
T ss_pred C-CChhhccccHHH----HHHHHHHHHHhccC
Confidence 9 999986 55554 89999999976643
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=158.02 Aligned_cols=211 Identities=14% Similarity=0.109 Sum_probs=140.2
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCc--EEEEecCCCCcCCC--CCc---------------ccCCChHHHhhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGY--AVFAADLLGHGRSD--GIR---------------CYLGDMEKVAAS 113 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~--~~~---------------~~~~~~~~~~~d 113 (323)
.+.++|||+||++++.. .|..+++.|.+.|+ +|+.+|.+++|.+. +.. ....++..++++
T Consensus 4 ~~~~pvvliHG~~~~~~-~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 4 IKTTATLFLHGYGGSER-SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp -CCEEEEEECCTTCCGG-GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCCCcEEEECCCCCChh-HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 34689999999999888 89999999999886 69999999988752 110 011256678899
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC----CceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhh
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP----NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLA 189 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+.++++.+....+ ..++.++||||||.+++.++.++|+ .+|+++|+++++..........
T Consensus 83 l~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~-------------- 146 (249)
T 3fle_A 83 IKEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNEN-------------- 146 (249)
T ss_dssp HHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSC--------------
T ss_pred HHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCC--------------
Confidence 9999999977654 4589999999999999999999874 2399999998765432110000
Q ss_pred cccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC------CCcccC
Q 020633 190 DTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT------ADGVTC 263 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~ 263 (323)
... ..+... ..+ ......+..+.. ....+++.++|+|.|+|+ .|..||
T Consensus 147 ~~~-----~~~~~~------------g~p-----~~~~~~~~~l~~----~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~ 200 (249)
T 3fle_A 147 VNE-----IIVDKQ------------GKP-----SRMNAAYRQLLS----LYKIYCGKEIEVLNIYGDLEDGSHSDGRVS 200 (249)
T ss_dssp TTT-----SCBCTT------------CCB-----SSCCHHHHHTGG----GHHHHTTTTCEEEEEEEECCSSSCBSSSSB
T ss_pred cch-----hhhccc------------CCC-----cccCHHHHHHHH----HHhhCCccCCeEEEEeccCCCCCCCCCccc
Confidence 000 000000 000 000011111111 123345468999999998 699999
Q ss_pred chhHHHHHHHcCCC--CccEEEecC--CCcccccCCCchhHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSA--DKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWI 311 (323)
Q Consensus 264 ~~~~~~~~~~~~~~--~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl 311 (323)
...++.+...+... ..+.+++.| +.|....+.+ ++.+.|.+||
T Consensus 201 ~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-----~V~~~I~~FL 247 (249)
T 3fle_A 201 NSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-----DVANEIIQFL 247 (249)
T ss_dssp HHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-----HHHHHHHHHh
Confidence 99887776666422 224455654 8899995533 4888999887
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-22 Score=174.73 Aligned_cols=260 Identities=13% Similarity=0.120 Sum_probs=160.4
Q ss_pred EcCCC-c--EEEEEecCCCCCcceEEEEecCCCCCcc-------------------------------------------
Q 020633 36 ETPNG-K--LFTQSFLPLDQKVKATVYMTHGYGSDTG------------------------------------------- 69 (323)
Q Consensus 36 ~~~~g-~--l~~~~~~~~~~~~~~~vv~~HG~~~~~~------------------------------------------- 69 (323)
...|| + |...+|.|.+.++.|+||..||++....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 258 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPIV 258 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEE
T ss_pred cCCCCCeeeEEEEEEecCCCCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccccccc
Confidence 45789 8 9999999987566799999999874311
Q ss_pred ----ccH-----HHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc--------------CC
Q 020633 70 ----WMF-----QKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS--------------EP 126 (323)
Q Consensus 70 ----~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--------------~~ 126 (323)
..| ..+...|+++||.|+++|+||+|.|.+.... .. ...++|+.++++++... .+
T Consensus 259 ~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~-~~-~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~ 336 (763)
T 1lns_A 259 DKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTS-GD-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 336 (763)
T ss_dssp SSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCT-TS-HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCT
T ss_pred ccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCC-CC-HHHHHHHHHHHHHHhhccccccccccccccccc
Confidence 011 1345788899999999999999999876432 23 35689999999999842 12
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh-hhhhcccccCCc----cccc
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-FGLADTWAAMPD----NKMV 201 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~ 201 (323)
++..+|.++|+|+||.+++.+|..+|+. ++++|..++..+... ...... ......+..... ....
T Consensus 337 ~~~grVgl~G~SyGG~ial~~Aa~~p~~-lkaiV~~~~~~d~~~---------~~~~~g~~~~~~g~~~~~~~~l~~~~~ 406 (763)
T 1lns_A 337 WANGKVAMTGKSYLGTMAYGAATTGVEG-LELILAEAGISSWYN---------YYRENGLVRSPGGFPGEDLDVLAALTY 406 (763)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBHHH---------HHBSSSSBCCCTTCTTCCHHHHHHHHC
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcc-cEEEEEecccccHHH---------HhhhcchhhhcccCCchhhhHHhHHHH
Confidence 3345899999999999999999999988 999999887653110 000000 000000000000 0000
Q ss_pred ccccCCh-------H----HHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHH
Q 020633 202 GKAIKDP-------E----KLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270 (323)
Q Consensus 202 ~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 270 (323)
....... . ........... .. ... .+... ......+.+|++|+|+|+|..|..+++..+.++
T Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~---~~w~~-~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l 479 (763)
T 1lns_A 407 SRNLDGADFLKGNAEYEKRLAEMTAALDRK-SG--DYN---QFWHD-RNYLINTDKVKADVLIVHGLQDWNVTPEQAYNF 479 (763)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHHCTT-TC--CCC---HHHHT-TBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHH
T ss_pred hhhcCcchhhhHHHHHHHHHHHHHhhhhhc-cC--chh---HHhhc-cChhhHhhcCCCCEEEEEECCCCCCChHHHHHH
Confidence 0000000 0 00000000000 00 000 00000 012356788999999999999999999999999
Q ss_pred HHHcCCCCccEEEecCCCcccccC-CCchhHHHHHHHHHHHHHHHHhhc
Q 020633 271 YEKASSADKSIKIYDGMYHSLIQG-EPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 271 ~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
++.+........++.++||....+ .+.. +.+.+.+||+++++..
T Consensus 480 ~~al~~~~~~~l~i~~~gH~~~~~~~~~~----~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 480 WKALPEGHAKHAFLHRGAHIYMNSWQSID----FSETINAYFVAKLLDR 524 (763)
T ss_dssp HHHSCTTCCEEEEEESCSSCCCTTBSSCC----HHHHHHHHHHHHHTTC
T ss_pred HHhhccCCCeEEEEeCCcccCccccchHH----HHHHHHHHHHHHhcCC
Confidence 999853112344556789987643 2233 7889999999998753
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-23 Score=158.99 Aligned_cols=238 Identities=11% Similarity=0.028 Sum_probs=150.1
Q ss_pred cccceeEEEcC-CC-cEEEEEecCCCC-------CcceEEEEecCCCCCccccHHH--HHHHH-hhCCcEEEEecCCCCc
Q 020633 28 VRNGKKYFETP-NG-KLFTQSFLPLDQ-------KVKATVYMTHGYGSDTGWMFQK--ICISF-ATWGYAVFAADLLGHG 95 (323)
Q Consensus 28 ~~~~~~~~~~~-~g-~l~~~~~~~~~~-------~~~~~vv~~HG~~~~~~~~~~~--~~~~l-~~~g~~v~~~d~~G~G 95 (323)
+..++..+.+. .| ++.+.+|.|.+. ++.|+||++||++++.. .|.. ....+ .+.|+.|+.+|+++++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 83 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN-SWLKRTNVERLLRGTNLIVVMPNTSNGW 83 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT-HHHHHSCHHHHTTTCCCEEEECCCTTST
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH-HHHhccCHHHHHhcCCeEEEEECCCCCc
Confidence 44556666554 56 899999998753 46799999999998776 6666 34445 4469999999999888
Q ss_pred CCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 96 RSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 96 ~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
.+...... ...+.+++|+..+++........+..+++++|||+||.+|+.++. +|++ ++++|+++|...........
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~-~~~~v~~~~~~~~~~~~~~~ 160 (263)
T 2uz0_A 84 YTDTQYGF-DYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNR-FSHAASFSGALSFQNFSPES 160 (263)
T ss_dssp TSBCTTSC-BHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCC-CSEEEEESCCCCSSSCCGGG
T ss_pred cccCCCcc-cHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-Cccc-cceEEEecCCcchhhccccc
Confidence 76543222 135666788888888764312222458999999999999999999 9988 99999999887654311100
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCC--cCEEE
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVT--VPFLT 253 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~ 253 (323)
. . .. ........+............ ....+.++. +|+++
T Consensus 161 ~-------~----------~~---------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~p~li 201 (263)
T 2uz0_A 161 Q-------N----------LG---------SPAYWRGVFGEIRDWTTSPYS-------------LESLAKKSDKKTKLWA 201 (263)
T ss_dssp T-------T----------CS---------CHHHHHHHHCCCSCTTTSTTS-------------HHHHGGGCCSCSEEEE
T ss_pred c-------c----------cc---------cchhHHHHcCChhhhccccCC-------------HHHHHHhccCCCeEEE
Confidence 0 0 00 000001111100000000000 111122332 89999
Q ss_pred EeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
++|++|.+++ ..+.+.+.+. +.+++++++++ ||... ..++..+.+.+||.++++.
T Consensus 202 ~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~g-~H~~~------~~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 202 WCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSAG-THEWY------YWEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp EEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESC-CSSHH------HHHHHHHHHHHHSSSCCCC
T ss_pred EeCCCchhhH--HHHHHHHHHHHCCCCeEEEECCC-CcCHH------HHHHHHHHHHHHHHhhccc
Confidence 9999999884 3455555553 23468999999 99764 2345678889999887754
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=165.30 Aligned_cols=203 Identities=18% Similarity=0.158 Sum_probs=145.1
Q ss_pred cceeEEEcC-CC-cEEEEEecCCC---CCcceEEEEecCCCCCccc-cHHHH----------HHHHhhCCcEEEEecCCC
Q 020633 30 NGKKYFETP-NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGW-MFQKI----------CISFATWGYAVFAADLLG 93 (323)
Q Consensus 30 ~~~~~~~~~-~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~-~~~~~----------~~~l~~~g~~v~~~d~~G 93 (323)
.+...+... +| ++.+..+.|.+ .++.|+||++||++++... .+..+ .......|+.|+++|.+|
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g 223 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPP 223 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCT
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCC
Confidence 455667777 88 99999999875 3567999999999865321 11111 122335678999999997
Q ss_pred CcCCCCC---cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 94 HGRSDGI---RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 94 ~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
.+..... ...........+|+.++++++....+++..+++|+|||+||.+++.++..+|+. +++++++++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~sg~~~--- 299 (380)
T 3doh_A 224 NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPEL-FAAAIPICGGGD--- 299 (380)
T ss_dssp TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCC---
T ss_pred CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCcc-ceEEEEecCCCC---
Confidence 6543211 111112345567777788877777655566899999999999999999999998 999999998641
Q ss_pred CCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC-Cc
Q 020633 171 NMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TV 249 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 249 (323)
...+..+ .+
T Consensus 300 ----------------------------------------------------------------------~~~~~~~~~~ 309 (380)
T 3doh_A 300 ----------------------------------------------------------------------VSKVERIKDI 309 (380)
T ss_dssp ----------------------------------------------------------------------GGGGGGGTTS
T ss_pred ----------------------------------------------------------------------hhhhhhccCC
Confidence 0112233 38
Q ss_pred CEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCC--------CcccccCCCchhHHHHHH--HHHHHHHHH
Q 020633 250 PFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGM--------YHSLIQGEPDENANLVLK--DMREWIDER 314 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------gH~~~~~~~~~~~~~~~~--~i~~fl~~~ 314 (323)
|+|+++|++|..+|++.++.+.+.+. +.++++++++++ +|..+ ..... .+.+||.++
T Consensus 310 P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~--------~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 310 PIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSW--------IPTYENQEAIEWLFEQ 378 (380)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTH--------HHHHTCHHHHHHHHTC
T ss_pred CEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhH--------HHhcCCHHHHHHHHhh
Confidence 99999999999999999988888774 245789999999 55433 22344 788999764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=179.25 Aligned_cols=251 Identities=10% Similarity=0.028 Sum_probs=163.8
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIR 101 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 101 (323)
.+..+.+.++..|| +|.+.++.|.+ .++.|+||++||+++... ..|......|+++||.|+++|+||+|.+....
T Consensus 477 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~ 556 (751)
T 2xe4_A 477 NYKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAW 556 (751)
T ss_dssp GEEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHH
T ss_pred ceEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcch
Confidence 34567788888999 99988877654 246799999999875432 23545566788899999999999998764221
Q ss_pred ----ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH
Q 020633 102 ----CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 102 ----~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
.....-....+|+.++++++......+..+++++|+|+||.+++.++.++|++ ++++|+.+|..+....
T Consensus 557 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~-~~a~v~~~~~~d~~~~------ 629 (751)
T 2xe4_A 557 YEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDL-FKVALAGVPFVDVMTT------ 629 (751)
T ss_dssp HHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCHHHH------
T ss_pred hhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchh-eeEEEEeCCcchHHhh------
Confidence 11011234568888888888776545567999999999999999999999998 9999999987542110
Q ss_pred HHHHhh-hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-EEEEe
Q 020633 178 HLFMYG-LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP-FLTVH 255 (323)
Q Consensus 178 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~ 255 (323)
+.. ........+. . .... .+.. ........ .....+.++++| +|+++
T Consensus 630 ---~~~~~~~~~~~~~~-----~-~g~p-~~~~--------------------~~~~~~~~-sp~~~~~~~~~Pp~Lii~ 678 (751)
T 2xe4_A 630 ---MCDPSIPLTTGEWE-----E-WGNP-NEYK--------------------YYDYMLSY-SPMDNVRAQEYPNIMVQC 678 (751)
T ss_dssp ---HTCTTSTTHHHHTT-----T-TCCT-TSHH--------------------HHHHHHHH-CTGGGCCSSCCCEEEEEE
T ss_pred ---hcccCcccchhhHH-----H-cCCC-CCHH--------------------HHHHHHhc-ChhhhhccCCCCceeEEe
Confidence 000 0000000000 0 0000 0000 00000000 023456678897 99999
Q ss_pred eCCCcccCchhHHHHHHHcCCC-----CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 256 GTADGVTCPTSSKLLYEKASSA-----DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++|..+|+..+..+++.+... .+.+.+++++||.+... ..........+.+||.+++..
T Consensus 679 G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 679 GLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKD--RYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSS--HHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCC--hhHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999888877421 12344559999998732 213344566899999998754
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-24 Score=172.50 Aligned_cols=189 Identities=14% Similarity=0.185 Sum_probs=134.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc---------------------cc------CC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR---------------------CY------LG 105 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---------------------~~------~~ 105 (323)
++.|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|.... .. ..
T Consensus 96 ~~~P~Vv~~HG~~~~~~-~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 96 EKYPLVVFSHGLGAFRT-LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp SCEEEEEEECCTTCCTT-TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCch-HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 46799999999998877 7889999999999999999999998874210 00 00
Q ss_pred ChHHHhhcHHHHHHHHHh--------------------cCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 106 DMEKVAASSLSFFKHVRD--------------------SEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~--------------------~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
.++..++|+..+++++.. ...++..+++++|||+||.+++.++...+ + ++++|++++.
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~-v~a~v~~~~~ 252 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-R-FRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-T-CCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-C-ccEEEEeCCc
Confidence 123346788888888754 22223458999999999999999988765 4 9999999875
Q ss_pred ccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCC
Q 020633 166 FVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFS 245 (323)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (323)
..... .+.+.
T Consensus 253 ~~p~~----------------------------------------------------------------------~~~~~ 262 (383)
T 3d59_A 253 MFPLG----------------------------------------------------------------------DEVYS 262 (383)
T ss_dssp CTTCC----------------------------------------------------------------------GGGGG
T ss_pred cCCCc----------------------------------------------------------------------hhhhc
Confidence 32100 01235
Q ss_pred CCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccC-------------------CCchhHHHHH
Q 020633 246 KVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQG-------------------EPDENANLVL 304 (323)
Q Consensus 246 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~-------------------~~~~~~~~~~ 304 (323)
++++|+|+++|++|..+ +..+.+ +.+. ....+++++++++|..+.+ +++...+.+.
T Consensus 263 ~i~~P~Lii~g~~D~~~--~~~~~~-~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (383)
T 3d59_A 263 RIPQPLFFINSEYFQYP--ANIIKM-KKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSN 339 (383)
T ss_dssp SCCSCEEEEEETTTCCH--HHHHHH-HTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHH
T ss_pred cCCCCEEEEecccccch--hhHHHH-HHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHH
Confidence 67899999999999754 223333 3332 2457899999999987532 2333345566
Q ss_pred HHHHHHHHHHHhh
Q 020633 305 KDMREWIDERVER 317 (323)
Q Consensus 305 ~~i~~fl~~~~~~ 317 (323)
+.+.+||++++..
T Consensus 340 ~~~~~Fl~~~L~~ 352 (383)
T 3d59_A 340 KASLAFLQKHLGL 352 (383)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 7899999999864
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=158.06 Aligned_cols=197 Identities=15% Similarity=0.125 Sum_probs=138.6
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCC---cEEEEecCCCCcCCC--CCc------c----------cCC-ChHHHh
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWG---YAVFAADLLGHGRSD--GIR------C----------YLG-DMEKVA 111 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g---~~v~~~d~~G~G~s~--~~~------~----------~~~-~~~~~~ 111 (323)
..++|||+||++++.. .|..+++.|.++| ++|+.+|.+++|.+. +.. . ..+ +++..+
T Consensus 3 ~~~pvv~iHG~~~~~~-~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQN-RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp SCCCEEEECCCGGGHH-HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCCCEEEECCCCCCHH-HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 3579999999999888 8999999998876 789988888777631 110 0 001 467889
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (323)
+++.++++.+...++ ..+++++||||||.+++.++..+ +++ |+++|+++++.......
T Consensus 82 ~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~-v~~lv~l~~p~~g~~~~-------------- 144 (250)
T 3lp5_A 82 VWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVH-IDRLMTIASPYNMESTS-------------- 144 (250)
T ss_dssp HHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCE-EEEEEEESCCTTTTCCC--------------
T ss_pred HHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchh-hCEEEEECCCCCccccc--------------
Confidence 999999999988765 56899999999999999999886 555 99999998865432110
Q ss_pred hhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC----CCccc
Q 020633 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT----ADGVT 262 (323)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~----~D~~~ 262 (323)
. .... ..+..+. .....+.+ ++|+++|+|+ .|.+|
T Consensus 145 ---------~-------~~~~--------------------~~~~~l~----~~~~~lp~-~vpvl~I~G~~~~~~Dg~V 183 (250)
T 3lp5_A 145 ---------T-------TAKT--------------------SMFKELY----RYRTGLPE-SLTVYSIAGTENYTSDGTV 183 (250)
T ss_dssp ---------S-------SCCC--------------------HHHHHHH----HTGGGSCT-TCEEEEEECCCCCCTTTBC
T ss_pred ---------c-------cccC--------------------HHHHHHH----hccccCCC-CceEEEEEecCCCCCCcee
Confidence 0 0000 0111111 11334444 7999999999 89999
Q ss_pred CchhHHHHHHHcCCCCcc--EEEe--cCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKS--IKIY--DGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~--~~~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
|.+.++.+...+...... .+.+ ++++|..+.++| ++.+.|.+||.+.
T Consensus 184 p~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-----~v~~~I~~FL~~~ 234 (250)
T 3lp5_A 184 PYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-----QIVSLIRQYLLAE 234 (250)
T ss_dssp CHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-----HHHHHHHHHTSCC
T ss_pred eHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-----HHHHHHHHHHhcc
Confidence 999888777766422122 2334 457799995433 5999999999643
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-22 Score=157.97 Aligned_cols=124 Identities=14% Similarity=0.141 Sum_probs=93.9
Q ss_pred cCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccH-HHHHHHHhhCCcEEEEecCC------------CC--cCCCC
Q 020633 37 TPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMF-QKICISFATWGYAVFAADLL------------GH--GRSDG 99 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~------------G~--G~s~~ 99 (323)
..+| ++.++.+.|.+ ..+.|+||++||++++.. .| ..+.+.|.++||.|+++|+| |+ |.|..
T Consensus 34 ~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~ 112 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGA-DYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGN 112 (304)
T ss_dssp -CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHH-HHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSC
T ss_pred CCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCC
Confidence 4567 99999888875 246799999999998876 55 67788888889999999999 55 66643
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccC
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~ 164 (323)
... ......+++.++++++......+..+++|+|||+||.+++.++..+|+..++++|+.++
T Consensus 113 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~ 174 (304)
T 3d0k_A 113 PRH---VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANP 174 (304)
T ss_dssp BCC---GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESC
T ss_pred CCc---ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecC
Confidence 311 11222355777777777655455779999999999999999999999533899997764
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-22 Score=154.47 Aligned_cols=196 Identities=12% Similarity=0.076 Sum_probs=124.0
Q ss_pred cceEEEEecCCCCCccccHH----HHHHHHhhCCcEEEEecCC---------------------CCcCCCCCc-----cc
Q 020633 54 VKATVYMTHGYGSDTGWMFQ----KICISFATWGYAVFAADLL---------------------GHGRSDGIR-----CY 103 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~----~~~~~l~~~g~~v~~~d~~---------------------G~G~s~~~~-----~~ 103 (323)
++|+|||+||++++.. .|. .+.+.|.+.||+|+++|+| |+|.+.... ..
T Consensus 4 ~~~~vl~lHG~g~~~~-~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK-VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCHH-HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccHH-HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 4689999999999876 554 5677787779999999999 344432100 00
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC------CCceeEEEEccCcccCCCCCchhhH
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE------PNTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
..++++.++.+.+.++. . ..+++|+||||||.+|+.++.+++ .. ++.++++++........
T Consensus 83 ~~d~~~~~~~l~~~~~~---~----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~----- 149 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKA---N----GPYDGIVGLSQGAALSSIITNKISELVPDHPQ-FKVSVVISGYSFTEPDP----- 149 (243)
T ss_dssp GCCCHHHHHHHHHHHHH---H----CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCC-CSEEEEESCCCCEEECT-----
T ss_pred hhhHHHHHHHHHHHHHh---c----CCeeEEEEeChHHHHHHHHHHHHhhcccCCCC-ceEEEEecCCCCCCccc-----
Confidence 12334444444433332 2 337899999999999999998752 23 77777777653211000
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
... .. ..+. .. +.. ....+.++++|+|+++|+
T Consensus 150 ---------~~~-~~------~~~~----~~------------~~~----------------~~~~~~~~~~P~l~i~G~ 181 (243)
T 1ycd_A 150 ---------EHP-GE------LRIT----EK------------FRD----------------SFAVKPDMKTKMIFIYGA 181 (243)
T ss_dssp ---------TST-TC------EEEC----GG------------GTT----------------TTCCCTTCCCEEEEEEET
T ss_pred ---------ccc-cc------cccc----hh------------HHH----------------hccCcccCCCCEEEEEeC
Confidence 000 00 0000 00 000 012345679999999999
Q ss_pred CCcccCchhHHHHHHHcCCC-----CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 258 ADGVTCPTSSKLLYEKASSA-----DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+|.++|++.++.+.+.+... ....++++++||.+..+ +.+.+.+.+||++.++.
T Consensus 182 ~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~------~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 182 SDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK------KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp TCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC------HHHHHHHHHHHHHHHC-
T ss_pred CCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch------HHHHHHHHHHHHHhhhh
Confidence 99999999998888877321 12556777889987632 24889999999988754
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-21 Score=150.33 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=137.1
Q ss_pred cceeEEEcC-CC-cEEEEEecCCC---CCcceEEEEecCCCCCcc-c-----cHHHHHHHHhhC----CcEEEEecCCCC
Q 020633 30 NGKKYFETP-NG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-----MFQKICISFATW----GYAVFAADLLGH 94 (323)
Q Consensus 30 ~~~~~~~~~-~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~-~-----~~~~~~~~l~~~----g~~v~~~d~~G~ 94 (323)
.+...+.+. +| .+.+..|.|.+ .++.|+||++||++++.. | .+..+++.|.++ ||.|+++|++++
T Consensus 32 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~ 111 (268)
T 1jjf_A 32 VVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAA 111 (268)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCC
T ss_pred EEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCC
Confidence 344555544 56 89999998875 356799999999987643 1 134457777776 499999999988
Q ss_pred cCCCCCcccCCChHHHhhc-HHHHHHHHHhcCCC--CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCC
Q 020633 95 GRSDGIRCYLGDMEKVAAS-SLSFFKHVRDSEPY--RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN 171 (323)
Q Consensus 95 G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~ 171 (323)
+.+... .+..+.++ +.++++++...... +..+++|+|||+||.+++.++.++|+. +++++++++.......
T Consensus 112 ~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~s~~~~~~~~ 185 (268)
T 1jjf_A 112 GPGIAD-----GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDK-FAYIGPISAAPNTYPN 185 (268)
T ss_dssp CTTCSC-----HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTT-CSEEEEESCCTTSCCH
T ss_pred Cccccc-----cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchh-hhheEEeCCCCCCCch
Confidence 754211 23333333 34445555444332 356899999999999999999999998 9999999986432110
Q ss_pred CchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcC-
Q 020633 172 MKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVP- 250 (323)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P- 250 (323)
. .. + .... . . ...++|
T Consensus 186 -------~-------~~---~-------------~~~~----------------------~-------~----~~~~~pp 202 (268)
T 1jjf_A 186 -------E-------RL---F-------------PDGG----------------------K-------A----AREKLKL 202 (268)
T ss_dssp -------H-------HH---C-------------TTTT----------------------H-------H----HHHHCSE
T ss_pred -------h-------hh---c-------------Ccch----------------------h-------h----hhhcCce
Confidence 0 00 0 0000 0 0 011345
Q ss_pred EEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 251 FLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 251 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++++|++|.+++. .+.+.+.+. +.+++++++++++|... ........+.+||.++
T Consensus 203 ~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 203 LFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN------VWKPGLWNFLQMADEA 260 (268)
T ss_dssp EEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH------HHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCccH--HHHHHHHHHHCCCceEEEEcCCCCcCHh------HHHHHHHHHHHHHHhc
Confidence 99999999999874 444544442 34678999999999875 1333567788898876
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.5e-21 Score=152.92 Aligned_cols=280 Identities=15% Similarity=0.096 Sum_probs=155.7
Q ss_pred CcccceeEEEcCC--C---cEEEEEecCCCC-CcceEEEEecCCCCCccc-------cHHHHHHHHh-hCCcEEEEecCC
Q 020633 27 GVRNGKKYFETPN--G---KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGW-------MFQKICISFA-TWGYAVFAADLL 92 (323)
Q Consensus 27 ~~~~~~~~~~~~~--g---~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~-------~~~~~~~~l~-~~g~~v~~~d~~ 92 (323)
++...++.+.+.| | .+....+.|.+. ++.|+|++.||....... ....++..|+ ++||.|+++|+|
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~r 119 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYL 119 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSCSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCC
Confidence 4444555555544 4 477888888764 568999999999743210 0123456677 899999999999
Q ss_pred CCcCCCCCcccCCChHHHhhcHHHHHHH---HHhcCCC-CCCCeEEEEechhHHHHHHHhhhcC----CCceeEEEEccC
Q 020633 93 GHGRSDGIRCYLGDMEKVAASSLSFFKH---VRDSEPY-RDLPGFLFGESMGGAATMLMYFQSE----PNTWTGLIFSAP 164 (323)
Q Consensus 93 G~G~s~~~~~~~~~~~~~~~d~~~~l~~---l~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v~~~vl~~~ 164 (323)
|+|.|.+.............++.+.++. +....++ +..+++++|||+||.+++.+|..+| +..+.+++..++
T Consensus 120 G~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~ 199 (377)
T 4ezi_A 120 GLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSA 199 (377)
T ss_dssp TSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESC
T ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCc
Confidence 9999976322211222222333332222 2111111 1358999999999999999988753 434889999988
Q ss_pred cccCCCCCchhh---------HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhc-------------CCCCcC
Q 020633 165 LFVIPENMKPSK---------LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIAS-------------NPRRYT 222 (323)
Q Consensus 165 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 222 (323)
+.+......... ........+..+...+. .+...+.+......... ......
T Consensus 200 p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (377)
T 4ezi_A 200 PYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWS------GFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPL 273 (377)
T ss_dssp CCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSS------CHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGG
T ss_pred ccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhcc------CHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHH
Confidence 776432110000 00011111111111111 11111112111111110 000000
Q ss_pred CCCchhHHHH--------HHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC-ccEEEecC--CCccc
Q 020633 223 GKPRVGTMRE--------IARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD-KSIKIYDG--MYHSL 291 (323)
Q Consensus 223 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~gH~~ 291 (323)
.......... +.....+....-..+++|+++++|++|.++|.+.++.+.+.++..+ ++++.+++ .+|..
T Consensus 274 ~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~ 353 (377)
T 4ezi_A 274 LIFQPKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQ 353 (377)
T ss_dssp GGBCHHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTT
T ss_pred HHhchhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccC
Confidence 0000000001 1111111111223578999999999999999999999988875222 78999999 88876
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhhcC
Q 020633 292 IQGEPDENANLVLKDMREWIDERVERYG 319 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 319 (323)
. .......+.+||+++..+..
T Consensus 354 ~-------~~~~~~~~~~wl~~~~~~~~ 374 (377)
T 4ezi_A 354 A-------HPFVLKEQVDFFKQFERQEA 374 (377)
T ss_dssp T-------HHHHHHHHHHHHHHHHTSSC
T ss_pred h-------HHHHHHHHHHHHHHhhcchh
Confidence 5 23367889999999887543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.89 E-value=9e-22 Score=154.49 Aligned_cols=223 Identities=10% Similarity=0.081 Sum_probs=137.6
Q ss_pred cCCC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHH---HHHHHHhhCCcEEEEecCCCCcC--------------
Q 020633 37 TPNG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQ---KICISFATWGYAVFAADLLGHGR-------------- 96 (323)
Q Consensus 37 ~~~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~-------------- 96 (323)
...| ++.+.+|.|.+ .++.|+||++||++++.. .|. .+...+.+.|+.|+++|.+++|.
T Consensus 30 ~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~ 108 (283)
T 4b6g_A 30 QTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQ-NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSA 108 (283)
T ss_dssp TTTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSH-HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTB
T ss_pred hhhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCC
Confidence 3456 89999999876 467899999999988765 443 24456667799999999874432
Q ss_pred CCCCcc------cCCC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 97 SDGIRC------YLGD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 97 s~~~~~------~~~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
+..... .... .+..++++..+++..... ..+++|+||||||.+|+.++.++|+. ++++++++|.....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~G~S~GG~~a~~~a~~~p~~-~~~~~~~s~~~~~~ 183 (283)
T 4b6g_A 109 GFYLNATEQPWAANYQMYDYILNELPRLIEKHFPT----NGKRSIMGHSMGGHGALVLALRNQER-YQSVSAFSPILSPS 183 (283)
T ss_dssp CTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCE----EEEEEEEEETHHHHHHHHHHHHHGGG-CSCEEEESCCCCGG
T ss_pred cccccCccCcccchhhHHHHHHHHHHHHHHHhCCC----CCCeEEEEEChhHHHHHHHHHhCCcc-ceeEEEECCccccc
Confidence 211000 0011 233345666666655322 34899999999999999999999998 99999999876532
Q ss_pred CCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCc
Q 020633 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTV 249 (323)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (323)
.. .+....+. .... ........ . .... ....+. ..+
T Consensus 184 ~~---~~~~~~~~----~~~g-------------------------~~~~~~~~----~---~~~~----~~~~~~-~~~ 219 (283)
T 4b6g_A 184 LV---PWGEKAFT----AYLG-------------------------KDREKWQQ----Y---DANS----LIQQGY-KVQ 219 (283)
T ss_dssp GS---HHHHHHHH----HHHC-------------------------SCGGGGGG----G---CHHH----HHHHTC-CCS
T ss_pred cC---cchhhhHH----hhcC-------------------------CchHHHHh----c---CHHH----HHHhcc-cCC
Confidence 21 11100000 0000 00000000 0 0000 111112 356
Q ss_pred CEEEEeeCCCcccCch-hHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 250 PFLTVHGTADGVTCPT-SSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 250 P~l~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|+++++|+.|.+++.. ..+.+.+.+. +.+++++++++++|... ........+.+|+.+.+
T Consensus 220 p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~------~~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 220 GMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYY------FIASFIGEHIAYHAAFL 282 (283)
T ss_dssp CCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHH------HHHHHHHHHHHHHHTTC
T ss_pred CEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHh------HHHHHHHHHHHHHHHhc
Confidence 9999999999998862 2445544442 34689999999999865 24446677788887654
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=152.36 Aligned_cols=196 Identities=19% Similarity=0.175 Sum_probs=135.1
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCC-----------cC---CCCCc---
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGH-----------GR---SDGIR--- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~-----------G~---s~~~~--- 101 (323)
.+.|....|.+ ..+.+|||+||+|++.. .+..+++.|... ++.+++++-|-. .. .....
T Consensus 24 ~l~y~ii~P~~-~~~~~VI~LHG~G~~~~-dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~ 101 (246)
T 4f21_A 24 AMNYELMEPAK-QARFCVIWLHGLGADGH-DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSL 101 (246)
T ss_dssp CCCEEEECCSS-CCCEEEEEEEC--CCCC-CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CG
T ss_pred CcCceEeCCCC-cCCeEEEEEcCCCCCHH-HHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccch
Confidence 57788888876 67889999999998876 666777766532 578888875421 11 00000
Q ss_pred ---ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH
Q 020633 102 ---CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 102 ---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
.....+...++.+..+++.... .+++..+++++|+|+||.+++.++.++|+. +.+++.+++.......
T Consensus 102 ~~~~d~~~i~~~~~~i~~li~~~~~-~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~-~a~~i~~sG~lp~~~~------- 172 (246)
T 4f21_A 102 NRVVDVEGINSSIAKVNKLIDSQVN-QGIASENIILAGFSQGGIIATYTAITSQRK-LGGIMALSTYLPAWDN------- 172 (246)
T ss_dssp GGGSCCC-CHHHHHHHHHHHHHHHH-C-CCGGGEEEEEETTTTHHHHHHHTTCSSC-CCEEEEESCCCTTHHH-------
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHH-cCCChhcEEEEEeCchHHHHHHHHHhCccc-cccceehhhccCcccc-------
Confidence 0111334445556666665443 355678999999999999999999999998 9999999875421100
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhc--CCCCCcCEEEEee
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDN--FSKVTVPFLTVHG 256 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~g 256 (323)
.... ....++|++++||
T Consensus 173 -------------------------------------------------------------~~~~~~~~~~~~Pvl~~HG 191 (246)
T 4f21_A 173 -------------------------------------------------------------FKGKITSINKGLPILVCHG 191 (246)
T ss_dssp -------------------------------------------------------------HSTTCCGGGTTCCEEEEEE
T ss_pred -------------------------------------------------------------ccccccccccCCchhhccc
Confidence 0000 0112679999999
Q ss_pred CCCcccCchhHHHHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 257 TADGVTCPTSSKLLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 257 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
++|++||.+.+++..+.+.. .++++..+++.||... .+ ..+.+.+||+++++
T Consensus 192 ~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~----~~----~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 192 TDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC----ME----EIKDISNFIAKTFK 245 (246)
T ss_dssp TTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC----HH----HHHHHHHHHHHHTT
T ss_pred CCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC----HH----HHHHHHHHHHHHhC
Confidence 99999999998888887743 3568889999999876 33 45789999998874
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-21 Score=166.38 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=108.9
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCc---c---ccHHH-HH---HHHhhCCcEEEEecCCCCc
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT---G---WMFQK-IC---ISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~---~---~~~~~-~~---~~l~~~g~~v~~~d~~G~G 95 (323)
.+..+.+.++..|| +|++..+.|.+.++.|+||++||++.+. . ..|.. +. +.|+++||.|+.+|+||+|
T Consensus 22 ~~~~~~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g 101 (615)
T 1mpx_A 22 DYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKY 101 (615)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred CCEEEEEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCC
Confidence 34556778889999 9999999987645678999999988642 1 12322 33 7888999999999999999
Q ss_pred CCCCCcccCC----ChH----HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 96 RSDGIRCYLG----DME----KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 96 ~s~~~~~~~~----~~~----~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.|.+...... .+. ..++|+.++++++..+.+....++.++|+|+||.+++.+|..+++. ++++|.+++..+
T Consensus 102 ~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~-l~a~v~~~~~~d 180 (615)
T 1mpx_A 102 GSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA-LKVAVPESPMID 180 (615)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT-EEEEEEESCCCC
T ss_pred CCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCc-eEEEEecCCccc
Confidence 9986533210 012 5678999999999876222245899999999999999999888888 999999999877
Q ss_pred C
Q 020633 168 I 168 (323)
Q Consensus 168 ~ 168 (323)
.
T Consensus 181 ~ 181 (615)
T 1mpx_A 181 G 181 (615)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-22 Score=151.45 Aligned_cols=207 Identities=13% Similarity=0.067 Sum_probs=136.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCc---EEEEecCCCCc------CCC----CC------cccCCChHHHhhcHH
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGY---AVFAADLLGHG------RSD----GI------RCYLGDMEKVAASSL 115 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~---~v~~~d~~G~G------~s~----~~------~~~~~~~~~~~~d~~ 115 (323)
+++|||+||++++.. .|..+++.|.++++ .++.++..+.| .+. .+ .....+++.+++++.
T Consensus 3 ~~pvvllHG~~~~~~-~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 3 QIPIILIHGSGGNAS-SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCEEEECCTTCCTT-TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCcc-hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 578999999999887 89999999998754 23443333332 221 11 012348899999999
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC-----CceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhc
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP-----NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD 190 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (323)
++++.+....+ ..+++++||||||.+++.++.++|+ + |+++|+++++........ ...
T Consensus 82 ~~i~~l~~~~~--~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~-v~~lv~i~~p~~g~~~~~--------------~~~ 144 (254)
T 3ds8_A 82 IAMEDLKSRYG--FTQMDGVGHSNGGLALTYYAEDYAGDKTVPT-LRKLVAIGSPFNDLDPND--------------NGM 144 (254)
T ss_dssp HHHHHHHHHHC--CSEEEEEEETHHHHHHHHHHHHSTTCTTSCE-EEEEEEESCCTTCSCHHH--------------HCS
T ss_pred HHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHccCCccccc-eeeEEEEcCCcCcccccc--------------ccc
Confidence 98888877654 4589999999999999999999987 6 999999998655321100 000
Q ss_pred ccccCCcccccccccCChHHHHHHhcCCCCcCCCCc-hhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC------CCcccC
Q 020633 191 TWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR-VGTMREIARVCQYIQDNFSKVTVPFLTVHGT------ADGVTC 263 (323)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~ 263 (323)
... ....+. ...+.. .......+.+ ++|++.|+|+ .|.+||
T Consensus 145 ~~~---------------------------~~~~p~~~~~~~~----~~~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp 192 (254)
T 3ds8_A 145 DLS---------------------------FKKLPNSTPQMDY----FIKNQTEVSP-DLEVLAIAGELSEDNPTDGIVP 192 (254)
T ss_dssp CTT---------------------------CSSCSSCCHHHHH----HHHTGGGSCT-TCEEEEEEEESBTTBCBCSSSB
T ss_pred ccc---------------------------cccCCcchHHHHH----HHHHHhhCCC-CcEEEEEEecCCCCCCCCcEee
Confidence 000 000000 011111 1112233443 7899999999 999999
Q ss_pred chhHHHHHHHcCCC--CccEEEecC--CCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 264 PTSSKLLYEKASSA--DKSIKIYDG--MYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 264 ~~~~~~~~~~~~~~--~~~~~~~~~--~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
...++.+...+... ..+..++.+ ++|..+.+++ ++.+.|..||++...
T Consensus 193 ~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~-----~v~~~i~~fL~~~~~ 244 (254)
T 3ds8_A 193 TISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETP-----KSIEKTYWFLEKFKT 244 (254)
T ss_dssp HHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSH-----HHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCH-----HHHHHHHHHHHHhcC
Confidence 99888877766421 233445555 7799985544 388999999987643
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=157.15 Aligned_cols=103 Identities=13% Similarity=0.022 Sum_probs=81.9
Q ss_pred cceEEEEecCCCCCccccHH-HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 54 VKATVYMTHGYGSDTGWMFQ-KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.+++|||+||++++....|. .+.+.|.++||+|+++|+||||.++ ....++++.++++.+....+ ..++
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~--------~~~~~~~l~~~i~~~~~~~g--~~~v 99 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND--------TQVNTEYMVNAITALYAGSG--NNKL 99 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC--------HHHHHHHHHHHHHHHHHHTT--SCCE
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCc--------HHHHHHHHHHHHHHHHHHhC--CCCE
Confidence 46789999999988762277 8899998889999999999998763 34455666677766655432 3589
Q ss_pred EEEEechhHHHHHHHhhhcC---CCceeEEEEccCccc
Q 020633 133 FLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFV 167 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~~~ 167 (323)
+|+||||||.++..++..++ ++ |+++|++++...
T Consensus 100 ~lVGhS~GG~va~~~~~~~~~~~~~-v~~lV~l~~~~~ 136 (317)
T 1tca_A 100 PVLTWSQGGLVAQWGLTFFPSIRSK-VDRLMAFAPDYK 136 (317)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGTTT-EEEEEEESCCTT
T ss_pred EEEEEChhhHHHHHHHHHcCccchh-hhEEEEECCCCC
Confidence 99999999999998888765 56 999999998653
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=163.83 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=109.7
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccc-------------cHH----HHHHHHhhCCcE
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW-------------MFQ----KICISFATWGYA 85 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~-------------~~~----~~~~~l~~~g~~ 85 (323)
..++..+.+.+.+.+| +|.++.+.|.+ .++.|+||++||.+++... .|+ .++..|+++||.
T Consensus 82 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~ 161 (391)
T 3g8y_A 82 KEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYV 161 (391)
T ss_dssp ETTEEEEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCE
T ss_pred cCCEEEEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCE
Confidence 4567778888888899 99999999875 4678999999999876431 112 578899999999
Q ss_pred EEEecCCCCcCCCCCcccC----CChHHH---------------hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHH
Q 020633 86 VFAADLLGHGRSDGIRCYL----GDMEKV---------------AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATML 146 (323)
Q Consensus 86 v~~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
|+++|+||+|.|....... .....+ +.|+..+++++.....++..+|.++||||||.+++.
T Consensus 162 Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~ 241 (391)
T 3g8y_A 162 AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMV 241 (391)
T ss_dssp EEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHH
Confidence 9999999999997543211 233333 378889999998776555678999999999999999
Q ss_pred HhhhcCCCceeEEEEccCccc
Q 020633 147 MYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 147 ~a~~~p~~~v~~~vl~~~~~~ 167 (323)
++...+ + |+++|+.++...
T Consensus 242 ~a~~~~-~-i~a~v~~~~~~~ 260 (391)
T 3g8y_A 242 LGVLDK-D-IYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHCT-T-CCEEEEESCBCC
T ss_pred HHHcCC-c-eeEEEEccCCCC
Confidence 887654 4 999998887543
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=160.38 Aligned_cols=137 Identities=17% Similarity=0.107 Sum_probs=87.8
Q ss_pred cccceeEEEcCC--C---cEEEEEecCCC---CCcceEEEEecCCCCCccc----------cHHHHHHHHhhCCcEEEEe
Q 020633 28 VRNGKKYFETPN--G---KLFTQSFLPLD---QKVKATVYMTHGYGSDTGW----------MFQKICISFATWGYAVFAA 89 (323)
Q Consensus 28 ~~~~~~~~~~~~--g---~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~----------~~~~~~~~l~~~g~~v~~~ 89 (323)
+...++.+.+.+ | .+....+.|.+ .++.|+||++||++++... .|..++..|+++||.|+++
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~ 123 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGS 123 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEE
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEe
Confidence 334444554443 4 47777777754 2567899999999876441 2557788899999999999
Q ss_pred cCCCCcCCCCCcccCCC-------hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh-cC----CCcee
Q 020633 90 DLLGHGRSDGIRCYLGD-------MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ-SE----PNTWT 157 (323)
Q Consensus 90 d~~G~G~s~~~~~~~~~-------~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p----~~~v~ 157 (323)
|+||||.|......... +.+.+.++..+++.+... +..+++++||||||.+++.++.. .+ ...+.
T Consensus 124 D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 200 (397)
T 3h2g_A 124 DYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTP---LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLV 200 (397)
T ss_dssp CCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCC---EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEE
T ss_pred cCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCC---CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceE
Confidence 99999998643222112 222333334444443321 12489999999999999887632 22 22377
Q ss_pred EEEEccCccc
Q 020633 158 GLIFSAPLFV 167 (323)
Q Consensus 158 ~~vl~~~~~~ 167 (323)
+++..++..+
T Consensus 201 ~~~~~~~~~~ 210 (397)
T 3h2g_A 201 ASAPISGPYA 210 (397)
T ss_dssp EEEEESCCSS
T ss_pred EEeccccccc
Confidence 7777665544
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=159.80 Aligned_cols=140 Identities=15% Similarity=0.188 Sum_probs=107.2
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccc-------------cHH----HHHHHHhhCCcE
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGW-------------MFQ----KICISFATWGYA 85 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~-------------~~~----~~~~~l~~~g~~ 85 (323)
..++..+.+.+.+.+| ++.++.+.|.+ .++.|+||++||.+++... .|. .++..|+++||.
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~ 166 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYI 166 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCE
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCE
Confidence 4566778888999999 99999998876 4678999999999875431 111 578899999999
Q ss_pred EEEecCCCCcCCCCCcccC-------------------CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHH
Q 020633 86 VFAADLLGHGRSDGIRCYL-------------------GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATML 146 (323)
Q Consensus 86 v~~~d~~G~G~s~~~~~~~-------------------~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~ 146 (323)
|+++|+||+|.|....... ......+.|+..+++++.....++..+|.++||||||.+++.
T Consensus 167 Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~ 246 (398)
T 3nuz_A 167 AVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMV 246 (398)
T ss_dssp EEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHH
Confidence 9999999999997443110 011223468888999998765555678999999999999998
Q ss_pred HhhhcCCCceeEEEEccCcc
Q 020633 147 MYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 147 ~a~~~p~~~v~~~vl~~~~~ 166 (323)
++...+. |+++|..++..
T Consensus 247 ~aa~~~~--i~a~v~~~~~~ 264 (398)
T 3nuz_A 247 LGTLDTS--IYAFVYNDFLC 264 (398)
T ss_dssp HHHHCTT--CCEEEEESCBC
T ss_pred HHhcCCc--EEEEEEecccc
Confidence 8887554 88988876543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=165.95 Aligned_cols=133 Identities=15% Similarity=0.085 Sum_probs=107.4
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH---HH-HHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK---IC-ISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~---~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+++.+++.|| +|++..|.|.+.++.|+||++||++.... .... .+ ..|+++||.|+++|+||+|.|.+....
T Consensus 10 ~~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~-~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~-- 86 (587)
T 3i2k_A 10 SNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP-- 86 (587)
T ss_dssp EEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCH-HHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT--
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCcc-ccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc--
Confidence 5678899999 99999999876457799999999887643 2222 23 788899999999999999999875432
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc-ccCC
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL-FVIP 169 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~-~~~~ 169 (323)
+...++|+.++++++.... ....++.++|+||||.+++.+|..+++. ++++|+.++. .+..
T Consensus 87 -~~~~~~D~~~~i~~l~~~~-~~~~~v~l~G~S~GG~~a~~~a~~~~~~-l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 87 -HVDDEADAEDTLSWILEQA-WCDGNVGMFGVSYLGVTQWQAAVSGVGG-LKAIAPSMASADLYR 148 (587)
T ss_dssp -TTTHHHHHHHHHHHHHHST-TEEEEEEECEETHHHHHHHHHHTTCCTT-EEEBCEESCCSCTCC
T ss_pred -ccchhHHHHHHHHHHHhCC-CCCCeEEEEeeCHHHHHHHHHHhhCCCc-cEEEEEeCCcccccc
Confidence 3456899999999997652 2235899999999999999999998888 9999999887 5543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-20 Score=161.41 Aligned_cols=141 Identities=13% Similarity=0.147 Sum_probs=107.7
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCc----c---ccHHHH---H-HHHhhCCcEEEEecCCCCc
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT----G---WMFQKI---C-ISFATWGYAVFAADLLGHG 95 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~----~---~~~~~~---~-~~l~~~g~~v~~~d~~G~G 95 (323)
+..+.+.+++.|| +|++.++.|.+.++.|+||++||++... . +.|... . +.|+++||.|+.+|+||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g 114 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKY 114 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTST
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCC
Confidence 4446788899999 9999999987645678999999887541 1 112222 2 7788999999999999999
Q ss_pred CCCCCcccCC----ChH----HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 96 RSDGIRCYLG----DME----KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 96 ~s~~~~~~~~----~~~----~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.|.+...... ++. ..++|+.++++++....+....+|.++|+|+||.+++.++..+++. ++++|..++..+
T Consensus 115 ~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~-lka~v~~~~~~d 193 (652)
T 2b9v_A 115 GSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPA-LKVAAPESPMVD 193 (652)
T ss_dssp TCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTT-EEEEEEEEECCC
T ss_pred CCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCc-eEEEEecccccc
Confidence 9986533210 112 5679999999999876222235899999999999999999888888 999999998877
Q ss_pred CC
Q 020633 168 IP 169 (323)
Q Consensus 168 ~~ 169 (323)
..
T Consensus 194 ~~ 195 (652)
T 2b9v_A 194 GW 195 (652)
T ss_dssp TT
T ss_pred cc
Confidence 43
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-20 Score=155.68 Aligned_cols=255 Identities=15% Similarity=0.079 Sum_probs=158.2
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHH----------------------HHHHHHhhCCcE
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ----------------------KICISFATWGYA 85 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~----------------------~~~~~l~~~g~~ 85 (323)
..+.+.+++.|| +|+..+|.|.+.++.|+||+.||++.+....+. ..+..|+++||.
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~ 119 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYV 119 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCE
T ss_pred EEEEEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCE
Confidence 446678899999 999999999865678999999999876321111 125789999999
Q ss_pred EEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 86 VFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 86 v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
|+++|+||+|.|.+.... -.....+|+.++++++...... ..+|.++|+|+||.+++.+|...|+. ++++|..++.
T Consensus 120 vv~~D~RG~G~S~G~~~~--~~~~~~~D~~~~i~~l~~~~~~-~~~igl~G~S~GG~~al~~a~~~p~~-l~aiv~~~~~ 195 (560)
T 3iii_A 120 VVKVALRGSDKSKGVLSP--WSKREAEDYYEVIEWAANQSWS-NGNIGTNGVSYLAVTQWWVASLNPPH-LKAMIPWEGL 195 (560)
T ss_dssp EEEEECTTSTTCCSCBCT--TSHHHHHHHHHHHHHHHTSTTE-EEEEEEEEETHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred EEEEcCCCCCCCCCcccc--CChhHHHHHHHHHHHHHhCCCC-CCcEEEEccCHHHHHHHHHHhcCCCc-eEEEEecCCc
Confidence 999999999999876432 1246789999999999875322 35899999999999999999998888 9999999987
Q ss_pred ccCCC-CCchhh----HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH
Q 020633 166 FVIPE-NMKPSK----LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240 (323)
Q Consensus 166 ~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
.+... ...... .+.... .......+... ... ...... +...+.. . ++.+ ..
T Consensus 196 ~d~~~~~~~~gG~~~~~~~~~w--~~~~~~~~~~~-------~~~-~~~~~~-~~~hp~~-------d---~~W~---~~ 251 (560)
T 3iii_A 196 NDMYREVAFHGGIPDTGFYRFW--TQGIFARWTDN-------PNI-EDLIQA-QQEHPLF-------D---DFWK---QR 251 (560)
T ss_dssp CBHHHHTTEETTEECCSHHHHH--HHHHHHHTTTC-------TTB-CCHHHH-HHHCCSS-------C---HHHH---TT
T ss_pred ccccccceecCCCCchhHHHHH--Hhhhccccccc-------cch-HHHHHH-HHHCCCc-------c---hHhh---cc
Confidence 66321 000000 000000 00000001000 000 001111 1111110 0 0000 01
Q ss_pred HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
...+.+|++|+|++.|-.|..+......+.++.+...+.-+ .+-+.+|+.. .+.....+...+|++.+++.
T Consensus 252 ~~~~~~I~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~~k~l-~ih~~~~~~~-----~~~~~~~~~~~~wfD~~LkG 322 (560)
T 3iii_A 252 QVPLSQIKTPLLTCASWSTQGLHNRGSFEGFKQAASEEKWL-YVHGRKEWES-----YYARENLERQKSFFDFYLKE 322 (560)
T ss_dssp BCCGGGCCSCEEEEEEGGGTTTTHHHHHHHHHHCCCSSEEE-EEESSCHHHH-----HHSHHHHHHHHHHHHHHTSC
T ss_pred CCchhhCCCCEEEeCCcCCCcccchhHHHHHHhccccCcEE-EECCCCCcCc-----ccChhHHHHHHHHHHHHhCC
Confidence 12467899999999999997444445556667775333333 3333344432 12233667889999999874
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=152.07 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=79.1
Q ss_pred ceEEEEecCCCCCc---cccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCc-ccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 55 KATVYMTHGYGSDT---GWMFQKICISFATW--GYAVFAADLLGHGRSDGIR-CYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 55 ~~~vv~~HG~~~~~---~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
.++|||+||++++. . .|..+++.|.+. |+.|+++|+ |||.|.... ....++.+.++++.+.++.+...
T Consensus 5 ~~pvVllHG~~~~~~~~~-~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l---- 78 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPL-SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL---- 78 (279)
T ss_dssp SCCEEEECCTTCCSCCTT-TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG----
T ss_pred CCcEEEECCCCCCCCCcc-cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhc----
Confidence 46799999999876 4 789999999875 789999998 999875221 11124555555555555432111
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..+++++||||||.++..++.++|+.+|+++|+++++.
T Consensus 79 ~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 24899999999999999999999984499999988644
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-21 Score=151.54 Aligned_cols=224 Identities=10% Similarity=-0.000 Sum_probs=139.7
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.+++|+|+||++++.. .|..+++.|. .+|.|+++|+||+|.+... ..+++++++++.+.+..+.. ..+++
T Consensus 100 ~~~~l~~lhg~~~~~~-~~~~l~~~L~-~~~~v~~~d~~g~~~~~~~---~~~~~~~a~~~~~~i~~~~~-----~~~~~ 169 (329)
T 3tej_A 100 NGPTLFCFHPASGFAW-QFSVLSRYLD-PQWSIIGIQSPRPNGPMQT---AANLDEVCEAHLATLLEQQP-----HGPYY 169 (329)
T ss_dssp SSCEEEEECCTTSCCG-GGGGGGGTSC-TTCEEEEECCCTTTSHHHH---CSSHHHHHHHHHHHHHHHCS-----SSCEE
T ss_pred CCCcEEEEeCCcccch-HHHHHHHhcC-CCCeEEEeeCCCCCCCCCC---CCCHHHHHHHHHHHHHHhCC-----CCCEE
Confidence 3689999999998876 8989998885 4699999999999876432 23788888888887776643 33899
Q ss_pred EEEechhHHHHHHHhhh---cCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHH
Q 020633 134 LFGESMGGAATMLMYFQ---SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
|+||||||.+|+.+|.+ +|++ |.+++++++.......... ... ........... ....
T Consensus 170 l~G~S~Gg~ia~~~a~~L~~~~~~-v~~lvl~d~~~~~~~~~~~----~~~------------~~~~~~~~~~~--~~~~ 230 (329)
T 3tej_A 170 LLGYSLGGTLAQGIAARLRARGEQ-VAFLGLLDTWPPETQNWQE----KEA------------NGLDPEVLAEI--NRER 230 (329)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCCTHHHHTC---------------------CCCCTHHHHH--HHHH
T ss_pred EEEEccCHHHHHHHHHHHHhcCCc-ccEEEEeCCCCCCcccccc----ccc------------cccChhhHHHH--HHHH
Confidence 99999999999999998 8988 9999999876532100000 000 00000000000 0000
Q ss_pred HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHh--cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCC
Q 020633 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQD--NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
........... .................... ....+++|++++.|++|...+.+....+.+.. ++.+++.++ +|
T Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~--~~~~~~~v~-g~ 306 (329)
T 3tej_A 231 EAFLAAQQGST-STELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI--AELDIYRQD-CA 306 (329)
T ss_dssp HHHHHTTCCCS-CCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE--EEEEEEEES-SC
T ss_pred HHHHHhccccc-cHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc--CCcEEEEec-CC
Confidence 00111111100 00011111111111111111 24567899999999999887776666665555 678899998 68
Q ss_pred cccccCCCchhHHHHHHHHHHHHH
Q 020633 289 HSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|+.+++.+ ..+.+.+.|.+||.
T Consensus 307 H~~~~~~~--~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 307 HVDIISPG--TFEKIGPIIRATLN 328 (329)
T ss_dssp GGGGGSTT--THHHHHHHHHHHHC
T ss_pred hHHhCCCh--HHHHHHHHHHHHhc
Confidence 99887665 34567777877763
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=143.72 Aligned_cols=212 Identities=15% Similarity=0.133 Sum_probs=134.6
Q ss_pred EEEEecC--CCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCC--CcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 57 TVYMTHG--YGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG--IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 57 ~vv~~HG--~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+++++|| ++++.. .|..++..|. .++.|+++|+||+|.+.. ......+++++++++.+.++.+.. ..++
T Consensus 91 ~l~~~hg~g~~~~~~-~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~-----~~p~ 163 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-EFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----DAPV 163 (319)
T ss_dssp EEEEECCCCTTCSTT-TTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----TSCE
T ss_pred cEEEeCCCCCCCcHH-HHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC-----CCCE
Confidence 8999998 455544 8899999886 569999999999999721 011124899999999988887753 3379
Q ss_pred EEEEechhHHHHHHHhhhc----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCCh
Q 020633 133 FLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
+++|||+||.+|+.+|.+. ++. |++++++++...... . .... .+..+.
T Consensus 164 ~l~G~S~GG~vA~~~A~~l~~~~g~~-v~~lvl~d~~~~~~~---~--~~~~---~~~~l~------------------- 215 (319)
T 2hfk_A 164 VLLGHAGGALLAHELAFRLERAHGAP-PAGIVLVDPYPPGHQ---E--PIEV---WSRQLG------------------- 215 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCC-CSEEEEESCCCTTSC---H--HHHH---THHHHH-------------------
T ss_pred EEEEECHHHHHHHHHHHHHHHhhCCC-ceEEEEeCCCCCCch---h--HHHH---HHHHhh-------------------
Confidence 9999999999999999886 455 999999987643211 0 0000 000000
Q ss_pred HHHHHHhcCCCCcCCCC--chhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcCCCCccEEEec
Q 020633 209 EKLKVIASNPRRYTGKP--RVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKASSADKSIKIYD 285 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 285 (323)
...+.. .+.... .......+..... ......+++|+++++| +|..++.+. ...+.+.+ ..+.+++.++
T Consensus 216 --~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~-~~~~~~~~v~ 286 (319)
T 2hfk_A 216 --EGLFAG---ELEPMSDARLLAMGRYARFLA--GPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHW-DLPHTVADVP 286 (319)
T ss_dssp --HHHHHT---CSSCCCHHHHHHHHHHHHHHH--SCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCC-SSCSEEEEES
T ss_pred --HHHHHh---hccccchHHHHHHHHHHHHHH--hCCCCCcCCCEEEEEc-CCCCCCccccccchhhcC-CCCCEEEEeC
Confidence 000000 000000 0000011111000 1234678999999999 999888765 44443333 2357889999
Q ss_pred CCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 286 GMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 286 ~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+||+.++ .+..+.+.+.|.+||.+...
T Consensus 287 -g~H~~~~---~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 287 -GDHFTMM---RDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp -SCTTHHH---HTCHHHHHHHHHHHHHHHHC
T ss_pred -CCcHHHH---HHhHHHHHHHHHHHHHhcCC
Confidence 5999764 12456699999999987654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=138.08 Aligned_cols=204 Identities=12% Similarity=0.016 Sum_probs=122.8
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|+++||++++.. .|..+++.|.+ +.|+++|+||+|. .++++.+.++.+.. ..++++
T Consensus 17 ~~~l~~~hg~~~~~~-~~~~~~~~l~~--~~v~~~d~~g~~~-------------~~~~~~~~i~~~~~-----~~~~~l 75 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGL-MYQNLSSRLPS--YKLCAFDFIEEED-------------RLDRYADLIQKLQP-----EGPLTL 75 (230)
T ss_dssp SEEEEEECCTTCCGG-GGHHHHHHCTT--EEEEEECCCCSTT-------------HHHHHHHHHHHHCC-----SSCEEE
T ss_pred CCCEEEECCCCCchH-HHHHHHHhcCC--CeEEEecCCCHHH-------------HHHHHHHHHHHhCC-----CCCeEE
Confidence 689999999998877 89999998864 9999999998763 23466666666643 237999
Q ss_pred EEechhHHHHHHHhhhcC---CCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 135 FGESMGGAATMLMYFQSE---PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
+|||+||.+|+.+|.+.+ .. +++++++++....... .+........+..+... .. ... . .......
T Consensus 76 ~G~S~Gg~ia~~~a~~~~~~~~~-v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~--~~~-~-~~~~~~~ 144 (230)
T 1jmk_C 76 FGYSAGCSLAFEAAKKLEGQGRI-VQRIIMVDSYKKQGVS---DLDGRTVESDVEALMNV---NR--DNE-A-LNSEAVK 144 (230)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCEECCCC-----------CCHHHHHHH---TT--TCS-G-GGSHHHH
T ss_pred EEECHhHHHHHHHHHHHHHcCCC-ccEEEEECCCCCCccc---ccccccHHHHHHHHHhc---Ch--hhh-h-hhhHHHH
Confidence 999999999999998754 55 9999999876432210 00000000000000000 00 000 0 0000000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHHH---hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCC
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQ---DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
. ............. ....++++|+++++|++|..++. ....+.+.. ..+.+++.+++ |
T Consensus 145 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~-~~~~~~~~i~g-~ 205 (230)
T 1jmk_C 145 H----------------GLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEEAT-TGAYRMKRGFG-T 205 (230)
T ss_dssp H----------------HHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGGGB-SSCEEEEECSS-C
T ss_pred H----------------HHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHHhc-CCCeEEEEecC-C
Confidence 0 0000000111111 34578899999999999998873 333333333 24578999997 9
Q ss_pred c--ccccCCCchhHHHHHHHHHHHHHH
Q 020633 289 H--SLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 289 H--~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
| ++. .+..+.+.+.|.+||.+
T Consensus 206 H~~~~~----~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 206 HAEMLQ----GETLDRNAGILLEFLNT 228 (230)
T ss_dssp GGGTTS----HHHHHHHHHHHHHHHTC
T ss_pred hHHHcC----cHhHHHHHHHHHHHHhh
Confidence 9 554 45567788888888753
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-18 Score=137.10 Aligned_cols=245 Identities=13% Similarity=0.071 Sum_probs=142.3
Q ss_pred ccceeEEEcCC-C-cEEEEEecCCCCCcceEEEEecCC--CCCccccHHH---HHHHHhhCCcEEEEecCCCCc-CCCCC
Q 020633 29 RNGKKYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGY--GSDTGWMFQK---ICISFATWGYAVFAADLLGHG-RSDGI 100 (323)
Q Consensus 29 ~~~~~~~~~~~-g-~l~~~~~~~~~~~~~~~vv~~HG~--~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G-~s~~~ 100 (323)
..+...+.+.. | ++.++ +.|.. ++.|+||++||+ +++.. .|.. +.+.+.+.|+.|+++|.++.. .++..
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~~-~~~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~ 84 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSGG-ANSPALYLLDGLRAQDDFS-GWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWY 84 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS-TTBCEEEEECCTTCCSSSC-HHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCS
T ss_pred eEEEEEEECccCCCceEEE-ECCCC-CCCCEEEEeCCCCCCCCcc-hhhcCCCHHHHHhcCCeEEEEECCCCCccccccC
Confidence 34556666654 5 77777 55544 568999999999 44444 5554 346677779999999987642 22111
Q ss_pred cc-------cCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCC
Q 020633 101 RC-------YLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENM 172 (323)
Q Consensus 101 ~~-------~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~ 172 (323)
.. ....+++++ +++..+++... +++..+++|+|+||||.+|+.++.++|++ +++++++++........
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~---~~~~~~~~l~G~S~GG~~al~~a~~~p~~-~~~~v~~sg~~~~~~~~ 160 (304)
T 1sfr_A 85 QPACGKAGCQTYKWETFLTSELPGWLQANR---HVKPTGSAVVGLSMAASSALTLAIYHPQQ-FVYAGAMSGLLDPSQAM 160 (304)
T ss_dssp SCEEETTEEECCBHHHHHHTHHHHHHHHHH---CBCSSSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSCTTSTT
T ss_pred CccccccccccccHHHHHHHHHHHHHHHHC---CCCCCceEEEEECHHHHHHHHHHHhCccc-eeEEEEECCccCccccc
Confidence 10 123555553 67777776521 22245899999999999999999999999 99999999876543211
Q ss_pred chhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
... .... .... ...+ ......... ........++... ...+..-+.|++
T Consensus 161 ~~~-~~~~---~~~~-~~~~---~~~~~~g~~----~~~~~~~~~p~~~-------------------~~~l~~~~~pi~ 209 (304)
T 1sfr_A 161 GPT-LIGL---AMGD-AGGY---KASDMWGPK----EDPAWQRNDPLLN-------------------VGKLIANNTRVW 209 (304)
T ss_dssp HHH-HHHH---HHHH-TTSC---CHHHHHCST----TSTHHHHSCTTTT-------------------HHHHHHHTCEEE
T ss_pred hhh-hhhH---hhhh-cccc---chHHhcCCc----chhhhHhcCHHHH-------------------HHHhhhcCCeEE
Confidence 000 0000 0000 0000 000000000 0000111111100 000100147999
Q ss_pred EEeeCCCc--------------ccCchhHHHHHHHcCC---CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 253 TVHGTADG--------------VTCPTSSKLLYEKASS---ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 253 ~i~g~~D~--------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++|+.|. .++.+..+.+.+.+.. .++++.++++++|... ........+..||.+.+
T Consensus 210 l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~------~w~~~l~~~l~~l~~~l 283 (304)
T 1sfr_A 210 VYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE------YWGAQLNAMKPDLQRAL 283 (304)
T ss_dssp EECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH------HHHHHHHHTHHHHHHHH
T ss_pred EEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccCHH------HHHHHHHHHHHHHHHhc
Confidence 99999998 5667777777777642 3467777766799753 23445677888998887
Q ss_pred hh
Q 020633 316 ER 317 (323)
Q Consensus 316 ~~ 317 (323)
..
T Consensus 284 ~~ 285 (304)
T 1sfr_A 284 GA 285 (304)
T ss_dssp TC
T ss_pred CC
Confidence 64
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=8.5e-21 Score=156.13 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=90.9
Q ss_pred CcceEEEEecCCCCCccccHHH-HHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQK-ICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~-~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+++||++||++++....|.. +.+.|.+ .||+|+++|+||+|.|.... ...+++.+++|+.++++++..+.+.+..
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~-~~~~~~~~~~dl~~~i~~l~~~~g~~~~ 146 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQ-ASQNIRVVGAEVAYLVQVLSTSLNYAPE 146 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchh-hHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4478999999999887226766 7888876 68999999999999987322 2235677889999999999644322355
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+++|+||||||.+|+.++.++|++ ++++++++|...
T Consensus 147 ~i~lvGhSlGg~vA~~~a~~~p~~-v~~iv~l~pa~p 182 (432)
T 1gpl_A 147 NVHIIGHSLGAHTAGEAGKRLNGL-VGRITGLDPAEP 182 (432)
T ss_dssp GEEEEEETHHHHHHHHHHHTTTTC-SSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccc-cceeEEeccccc
Confidence 899999999999999999999988 999999987653
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-19 Score=133.98 Aligned_cols=201 Identities=10% Similarity=0.021 Sum_probs=124.1
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.+++||++||++++.. .|..++..|.. ++.|+++|+||++ +.++++.+.++.+.. ..+++
T Consensus 21 ~~~~l~~~hg~~~~~~-~~~~~~~~l~~-~~~v~~~d~~g~~-------------~~~~~~~~~i~~~~~-----~~~~~ 80 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGI-YFKDLALQLNH-KAAVYGFHFIEED-------------SRIEQYVSRITEIQP-----EGPYV 80 (244)
T ss_dssp CSSEEEEECCTTCCGG-GGHHHHHHTTT-TSEEEEECCCCST-------------THHHHHHHHHHHHCS-----SSCEE
T ss_pred CCCCEEEECCCCCCHH-HHHHHHHHhCC-CceEEEEcCCCHH-------------HHHHHHHHHHHHhCC-----CCCEE
Confidence 3679999999998877 89999998864 6999999999863 235666666666532 23799
Q ss_pred EEEechhHHHHHHHhhhc---CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHH
Q 020633 134 LFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
++||||||.+|+.+|.+. +++ +.+++++++....... .. . .......... .+..
T Consensus 81 l~GhS~Gg~va~~~a~~~~~~~~~-v~~lvl~~~~~~~~~~-~~-~-------------------~~~~~~~~~~-~~~~ 137 (244)
T 2cb9_A 81 LLGYSAGGNLAFEVVQAMEQKGLE-VSDFIIVDAYKKDQSI-TA-D-------------------TENDDSAAYL-PEAV 137 (244)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCC-EEEEEEESCCCCCSCC-CC-C--------------------------CCS-CHHH
T ss_pred EEEECHhHHHHHHHHHHHHHcCCC-ccEEEEEcCCCCcccc-cc-c-------------------ccHHHHHHHh-HHHH
Confidence 999999999999999875 456 9999999876431100 00 0 0000000000 1111
Q ss_pred HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC--CCcccCchhHHHHHHHcCCCCccEEEecCCC
Q 020633 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT--ADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
...+. .....+.. ..........+++|+++++|+ +|.+ +++....+.+.. ..+.+++.+++ |
T Consensus 138 ~~~~~------------~~~~~~~~-~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~-~~~~~~~~i~g-g 201 (244)
T 2cb9_A 138 RETVM------------QKKRCYQE-YWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAA-EEGYAEYTGYG-A 201 (244)
T ss_dssp HHHHT------------HHHHHHHH-HHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGB-SSCEEEEECSS-B
T ss_pred HHHHH------------HHHHHHHH-HHHhhccCCCcCCCEEEEEccCccccc-cccchhHHHHhc-CCCCEEEEecC-C
Confidence 11000 00000000 000012457789999999999 8874 333333333333 24688999996 9
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 289 HSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|..++. .+..+.+.+.|.+||.+..
T Consensus 202 H~~~~~--~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 202 HKDMLE--GEFAEKNANIILNILDKIN 226 (244)
T ss_dssp GGGTTS--HHHHHHHHHHHHHHHHTC-
T ss_pred hHHHcC--hHHHHHHHHHHHHHHhcCc
Confidence 943321 4567779999999998654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=141.63 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=79.4
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+++.|. +.|+++|+++.. ...+++++++++.+.++.+.. ..++
T Consensus 22 ~~~~~l~~~hg~~~~~~-~~~~~~~~L~---~~v~~~d~~~~~-------~~~~~~~~a~~~~~~i~~~~~-----~~~~ 85 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTT-VFHSLASRLS---IPTYGLQCTRAA-------PLDSIHSLAAYYIDCIRQVQP-----EGPY 85 (283)
T ss_dssp SSSCCEEEECCTTCCSG-GGHHHHHHCS---SCEEEECCCTTS-------CCSCHHHHHHHHHHHHTTTCC-----SSCC
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC---ceEEEEecCCCC-------CCCCHHHHHHHHHHHHHHhCC-----CCCE
Confidence 45789999999999887 8999999985 899999997421 124889999998888876642 2479
Q ss_pred EEEEechhHHHHHHHhhhc---CCCcee---EEEEccCcc
Q 020633 133 FLFGESMGGAATMLMYFQS---EPNTWT---GLIFSAPLF 166 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~---p~~~v~---~~vl~~~~~ 166 (323)
+++||||||.+|+.+|.+. |++ +. +++++++..
T Consensus 86 ~l~GhS~Gg~va~~~a~~~~~~~~~-v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 86 RVAGYSYGACVAFEMCSQLQAQQSP-APTHNSLFLFDGSP 124 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHTT-SCCCCEEEEESCCT
T ss_pred EEEEECHhHHHHHHHHHHHHHcCCC-CCccceEEEEcCCc
Confidence 9999999999999999865 777 88 999998754
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-18 Score=134.26 Aligned_cols=133 Identities=12% Similarity=0.050 Sum_probs=91.7
Q ss_pred CcccceeEEEcC-CC-cEEEEEecCCCCCcceEEEEecCCC--CCccccHHH---HHHHHhhCCcEEEEecCCCCc-CCC
Q 020633 27 GVRNGKKYFETP-NG-KLFTQSFLPLDQKVKATVYMTHGYG--SDTGWMFQK---ICISFATWGYAVFAADLLGHG-RSD 98 (323)
Q Consensus 27 ~~~~~~~~~~~~-~g-~l~~~~~~~~~~~~~~~vv~~HG~~--~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G-~s~ 98 (323)
....+...+.+. .| ++.+. +.|.+ .|+||++||++ ++.. .|.. +.+.+.+.|+.|+++|.++.+ .++
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~---~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~ 82 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG---PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTN 82 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS---SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSB
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC---CCEEEEECCCCCCCChh-hhhhcccHHHHHhcCCeEEEEECCCCCCccCC
Confidence 344566677665 56 88887 66754 47999999995 3333 4543 556677789999999997642 211
Q ss_pred CCcccCCCh-HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 99 GIRCYLGDM-EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 99 ~~~~~~~~~-~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
........+ +.+++|+..+++. ..+++..+++|+|+||||.+|+.++.++|++ +++++++++....
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~i~~---~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~-~~~~v~~sg~~~~ 149 (280)
T 1r88_A 83 WEQDGSKQWDTFLSAELPDWLAA---NRGLAPGGHAAVGAAQGGYGAMALAAFHPDR-FGFAGSMSGFLYP 149 (280)
T ss_dssp CSSCTTCBHHHHHHTHHHHHHHH---HSCCCSSCEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCCCT
T ss_pred CCCCCCCcHHHHHHHHHHHHHHH---HCCCCCCceEEEEECHHHHHHHHHHHhCccc-eeEEEEECCccCc
Confidence 111111134 3345667666665 2223345899999999999999999999999 9999999987653
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.9e-19 Score=136.77 Aligned_cols=103 Identities=14% Similarity=0.032 Sum_probs=81.1
Q ss_pred cceEEEEecCCCCCccccHH-HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 54 VKATVYMTHGYGSDTGWMFQ-KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.+++|||+||++++....|. .+.+.|.++||+|+++|+||||.++ .+..++++.++++.+....+ ..++
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~--------~~~~~~~la~~I~~l~~~~g--~~~v 133 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLND--------TQVNTEYMVNAITTLYAGSG--NNKL 133 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSC--------HHHHHHHHHHHHHHHHHHTT--SCCE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCc--------HHHHHHHHHHHHHHHHHHhC--CCce
Confidence 46799999999988633787 8999999999999999999999753 34445566666666654432 3589
Q ss_pred EEEEechhHHHHHHHhhhc---CCCceeEEEEccCccc
Q 020633 133 FLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~ 167 (323)
+|+||||||.++..++..+ +++ |+++|++++...
T Consensus 134 ~LVGHSmGGlvA~~al~~~p~~~~~-V~~lV~lapp~~ 170 (316)
T 3icv_A 134 PVLTWSQGGLVAQWGLTFFPSIRSK-VDRLMAFAPDYK 170 (316)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGTTT-EEEEEEESCCTT
T ss_pred EEEEECHHHHHHHHHHHhccccchh-hceEEEECCCCC
Confidence 9999999999997777665 466 999999998764
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-19 Score=144.63 Aligned_cols=110 Identities=17% Similarity=0.109 Sum_probs=81.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCc---EEEEecCCCCcCC-----CCC----c-----------c-------
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGY---AVFAADLLGHGRS-----DGI----R-----------C------- 102 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~---~v~~~d~~G~G~s-----~~~----~-----------~------- 102 (323)
..+++|||+||++++.. .|..+++.|.++|| +|+++|++|+|.| +.. . .
T Consensus 20 ~~~ppVVLlHG~g~s~~-~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG-QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 44789999999998887 89999999999999 7999999999976 100 0 0
Q ss_pred ----cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcc
Q 020633 103 ----YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLF 166 (323)
Q Consensus 103 ----~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~ 166 (323)
...+....++++.+.++.+....+ ..+++++||||||.+++.++.++|+ + |+++|++++..
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~lg--~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~-V~~LVlIapp~ 166 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAESG--ADKVDLVGHSMGTFFLVRYVNSSPERAAK-VAHLILLDGVW 166 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHTCHHHHHT-EEEEEEESCCC
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHHCccchhh-hCEEEEECCcc
Confidence 000223334455545544443322 3589999999999999999999873 6 99999999765
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.5e-17 Score=127.35 Aligned_cols=129 Identities=12% Similarity=0.026 Sum_probs=87.5
Q ss_pred ceeEEEcC-CC-cEEEEEecCCCCCcceEEEEecCCCC--CccccHHHH---HHHHhhCCcEEEEecCCCC-cCCCCC-c
Q 020633 31 GKKYFETP-NG-KLFTQSFLPLDQKVKATVYMTHGYGS--DTGWMFQKI---CISFATWGYAVFAADLLGH-GRSDGI-R 101 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~~~~~~~vv~~HG~~~--~~~~~~~~~---~~~l~~~g~~v~~~d~~G~-G~s~~~-~ 101 (323)
+...+.+. .| ++.++.. |.. .++||++||+++ +.. .|... .+.+.+.|+.|+++|.+|. +.+... .
T Consensus 7 ~~~~~~s~~~~~~~~v~~~-p~~---~~~v~llHG~~~~~~~~-~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~ 81 (280)
T 1dqz_A 7 EYLQVPSASMGRDIKVQFQ-GGG---PHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQP 81 (280)
T ss_dssp EEEEEEETTTTEEEEEEEE-CCS---SSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSS
T ss_pred EEEEEECcccCceeEEEEc-CCC---CCEEEEECCCCCCCCcc-cccccCcHHHHHhcCCeEEEEECCCCCccccCCCCC
Confidence 34455544 45 6766643 332 359999999963 444 55543 3567777999999998754 222111 1
Q ss_pred c------cCCChHHH-hhcHHHHHHH-HHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 102 C------YLGDMEKV-AASSLSFFKH-VRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 102 ~------~~~~~~~~-~~d~~~~l~~-l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
. ...+++++ ++++..+++. +... ..+++|+||||||.+|+.++.++|++ +++++++++.....
T Consensus 82 ~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~----~~~~~l~G~S~GG~~al~~a~~~p~~-~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 82 SQSNGQNYTYKWETFLTREMPAWLQANKGVS----PTGNAAVGLSMSGGSALILAAYYPQQ-FPYAASLSGFLNPS 152 (280)
T ss_dssp CTTTTCCSCCBHHHHHHTHHHHHHHHHHCCC----SSSCEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCCTT
T ss_pred CccccccccccHHHHHHHHHHHHHHHHcCCC----CCceEEEEECHHHHHHHHHHHhCCch-heEEEEecCccccc
Confidence 0 12345554 4778887776 3332 45899999999999999999999999 99999999876543
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.6e-18 Score=137.34 Aligned_cols=279 Identities=14% Similarity=0.085 Sum_probs=148.4
Q ss_pred cceeEEEcC--CC-c--EEEEEecCCCCCc-ceEEEEecCCCCCcc-----c--------------cH-HHHHHHH-hhC
Q 020633 30 NGKKYFETP--NG-K--LFTQSFLPLDQKV-KATVYMTHGYGSDTG-----W--------------MF-QKICISF-ATW 82 (323)
Q Consensus 30 ~~~~~~~~~--~g-~--l~~~~~~~~~~~~-~~~vv~~HG~~~~~~-----~--------------~~-~~~~~~l-~~~ 82 (323)
..++.+.+. +| . ....++.|.+..+ .|+|.+-||..+... . .+ ..++..+ ..+
T Consensus 75 a~ri~Y~std~~G~p~~~~gtv~~P~~~~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~ 154 (462)
T 3guu_A 75 SFQLQYRTTNTQNEAVADVATVWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQ 154 (462)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECSSCCSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHT
T ss_pred EEEEEEEEECCCCCEEEEEEEEEecCCCCCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhC
Confidence 334444444 34 2 5566667765433 799999999864311 0 11 2345566 789
Q ss_pred CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC-CCCCeEEEEechhHHHHHHHhhhc----CCCcee
Q 020633 83 GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY-RDLPGFLFGESMGGAATMLMYFQS----EPNTWT 157 (323)
Q Consensus 83 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~ 157 (323)
||.|+++|++|+|.+-. .-.....++.+.++......+. ...++.++|||+||..++.++... |+.++.
T Consensus 155 G~~Vv~~Dy~G~G~~y~------~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 155 GYYVVSSDHEGFKAAFI------AGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp TCEEEEECTTTTTTCTT------CHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCEEEEecCCCCCCccc------CCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 99999999999996421 1111122233333332211111 146899999999999998877653 455599
Q ss_pred EEEEccCcccCCCCCchh---hHHHHHhhhhhhhhcccccCCcccccccccCChHHH-------------HHHh----cC
Q 020633 158 GLIFSAPLFVIPENMKPS---KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL-------------KVIA----SN 217 (323)
Q Consensus 158 ~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~----~~ 217 (323)
+++..+++.+........ .....+...+..+...+.... ..+...+...... .... .+
T Consensus 229 g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~--~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~ 306 (462)
T 3guu_A 229 GASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDME--SFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLN 306 (462)
T ss_dssp EEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHH--HHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCC
T ss_pred EEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchh--HHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCC
Confidence 999999876543211000 000000000111111000000 0000011000000 0000 00
Q ss_pred CCCcCCCCchhHHHHHHHHHHHHHh-------cCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCC
Q 020633 218 PRRYTGKPRVGTMREIARVCQYIQD-------NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMY 288 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g 288 (323)
...+...........+....++..- .-.++++|++++||++|.++|.+.++.+.+.++ +.+++++++++.+
T Consensus 307 ~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~ 386 (462)
T 3guu_A 307 VFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAE 386 (462)
T ss_dssp GGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCC
T ss_pred HHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCC
Confidence 0000000000000111111211101 123568999999999999999999999988774 3468899999999
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHhhcCCCC-C
Q 020633 289 HSLIQGEPDENANLVLKDMREWIDERVERYGPKN-C 323 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~~~~-~ 323 (323)
|.... . .-...+.+||++++....++. |
T Consensus 387 H~~~~---~----~~~~d~l~WL~~r~~G~~~~~~C 415 (462)
T 3guu_A 387 HLTAE---I----FGLVPSLWFIKQAFDGTTPKVIC 415 (462)
T ss_dssp HHHHH---H----HTHHHHHHHHHHHHHTCCCCCCT
T ss_pred ccCch---h----hhHHHHHHHHHHHhCCCCCCCCC
Confidence 98872 1 136788999999987655556 6
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-18 Score=143.37 Aligned_cols=113 Identities=13% Similarity=0.053 Sum_probs=90.5
Q ss_pred CcceEEEEecCCCCCccccHHH-HHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQK-ICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~-~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|.+. ||+|+++|+||+|.|.... ...++..+++|+.++++++..+.+++..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ-ASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhH-hHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4579999999999887236776 66777664 8999999999999986321 1235677889999999999643222245
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+++|+||||||.+|+.+|.++|++ |+++++++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~-v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGH-VGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccc-cceEEEecCCcc
Confidence 899999999999999999999998 999999988653
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-18 Score=134.28 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=89.5
Q ss_pred CcceEEEEecCCCCCcc-----ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC
Q 020633 53 KVKATVYMTHGYGSDTG-----WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 127 (323)
+++++|||+||++++.. ..|..+.+.|.++||.|+++|+||+|.|.... .+.+++++++.++++.+..
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~---~~~~~l~~~i~~~l~~~~~---- 78 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPN---GRGEQLLAYVKTVLAATGA---- 78 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTT---SHHHHHHHHHHHHHHHHCC----
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCC----
Confidence 45789999999988762 37889999999999999999999999986532 3678888999988888753
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+++++||||||.++..++..+|++ |+++|+++++.
T Consensus 79 --~~v~lvGHS~GG~va~~~a~~~p~~-V~~lV~i~~p~ 114 (320)
T 1ys1_X 79 --TKVNLVGHSQGGLTSRYVAAVAPDL-VASVTTIGTPH 114 (320)
T ss_dssp --SCEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCT
T ss_pred --CCEEEEEECHhHHHHHHHHHhChhh-ceEEEEECCCC
Confidence 3899999999999999999999988 99999999854
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=142.24 Aligned_cols=113 Identities=12% Similarity=0.129 Sum_probs=90.2
Q ss_pred CcceEEEEecCCCCCccccHHH-HHHHHhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQK-ICISFATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~-~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|.++ ||+|+++|++|+|.|.... ...+++.+++|+.++++++..+.+.+..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~-~~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ-AVQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHH-HHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999877226766 77778764 8999999999999986322 1235677889999999999643222245
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+++|+||||||.+|..++.++|++ |+++++++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~-v~~iv~ldpa~p 182 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGR-VGRVTGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccc-eeeEEecccccc
Confidence 899999999999999999999998 999999988653
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.72 E-value=8.4e-18 Score=137.88 Aligned_cols=113 Identities=13% Similarity=0.092 Sum_probs=87.3
Q ss_pred CcceEEEEecCCCCCccccHHH-HHHHHh-hCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQK-ICISFA-TWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~-~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +++.|. ..+|+|+++|++|+|.|.... ...+.+..++++.++++.+....+.+..
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~-~~~~~~~v~~~la~ll~~L~~~~g~~~~ 145 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQ-ASQNVRIVGAEVAYLVGVLQSSFDYSPS 145 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHH-HHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999875335665 666663 457999999999999985221 1125667788999999988533222245
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+++|+||||||.+|..++.++|++ |+++++++|...
T Consensus 146 ~v~LIGhSlGg~vA~~~a~~~p~~-v~~iv~Ldpa~p 181 (449)
T 1hpl_A 146 NVHIIGHSLGSHAAGEAGRRTNGA-VGRITGLDPAEP 181 (449)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCT
T ss_pred cEEEEEECHhHHHHHHHHHhcchh-cceeeccCcccc
Confidence 899999999999999999999998 999999887653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.7e-16 Score=120.41 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=90.8
Q ss_pred ceeEEEcCCCcEEEEEecCCC---CCcceEEEEecCCCCCcc-c-----cHHHHHHHHhhC----CcEEEEecCCCCcCC
Q 020633 31 GKKYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-----MFQKICISFATW----GYAVFAADLLGHGRS 97 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~-~-----~~~~~~~~l~~~----g~~v~~~d~~G~G~s 97 (323)
+.+.+.+.++.+.+.+|.|.+ .++.|+||++||++++.. | .+..+++.|.++ ++.|+++|.+|- +
T Consensus 42 ~~~~~~s~~~~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~ 119 (297)
T 1gkl_A 42 VKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--N 119 (297)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--T
T ss_pred EEEEEEcCCCEEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--c
Confidence 456666666688888998875 245789999999986543 1 234667777766 499999998752 2
Q ss_pred CCCcccCCCh-HHHhhcHHHHHHHHHhcCC---------CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 98 DGIRCYLGDM-EKVAASSLSFFKHVRDSEP---------YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 98 ~~~~~~~~~~-~~~~~d~~~~l~~l~~~~~---------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
... ..+ +.+++++..+++..-...+ .+..+++|+|+||||.+++.++.++|+. +++++++++..
T Consensus 120 ~~~----~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~-f~~~v~~sg~~ 193 (297)
T 1gkl_A 120 CTA----QNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDY-VAYFMPLSGDY 193 (297)
T ss_dssp CCT----TTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTT-CCEEEEESCCC
T ss_pred cch----HHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchh-hheeeEecccc
Confidence 111 123 3445677777665422110 1234799999999999999999999999 99999999864
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-17 Score=130.71 Aligned_cols=120 Identities=14% Similarity=0.081 Sum_probs=87.6
Q ss_pred EEEEecCCCCCcceEEEEecCCCCCc---------cccH----HHHHHHHhhCCcE---EEEecCCCCcCCCCCcccCCC
Q 020633 43 FTQSFLPLDQKVKATVYMTHGYGSDT---------GWMF----QKICISFATWGYA---VFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 43 ~~~~~~~~~~~~~~~vv~~HG~~~~~---------~~~~----~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~ 106 (323)
....+.+.. ..+++|||+||++++. ...| ..+++.|.++||. |+++|++|+|.|...... ..
T Consensus 29 gG~~~~p~~-~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~-~~ 106 (342)
T 2x5x_A 29 GGFGGGSCT-ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYN-YH 106 (342)
T ss_dssp CEEECCSSC-CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGC-CB
T ss_pred CcccCCCCC-CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCcccc-CC
Confidence 334444443 4567899999999842 2367 7899999999998 999999999988643211 13
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
.+..++++.+.++.+....+ ..+++|+||||||.+++.++.++ |++ |+++|+++++..
T Consensus 107 ~~~~~~~l~~~I~~l~~~~g--~~~v~LVGHSmGG~iA~~~a~~~~~p~~-V~~lVlla~p~~ 166 (342)
T 2x5x_A 107 SSTKYAIIKTFIDKVKAYTG--KSQVDIVAHSMGVSMSLATLQYYNNWTS-VRKFINLAGGIR 166 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--CSCEEEEEETHHHHHHHHHHHHHTCGGG-EEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHHcCchhh-hcEEEEECCCcc
Confidence 34445555555555443322 34899999999999999999998 787 999999998654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-17 Score=129.60 Aligned_cols=101 Identities=13% Similarity=0.030 Sum_probs=86.5
Q ss_pred CcceEEEEecCCCCCc----cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCC
Q 020633 53 KVKATVYMTHGYGSDT----GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYR 128 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~----~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 128 (323)
+++++|||+||++++. .+.|..+.+.|.++||.|+++|+||+|.+. .+.+++++++.++++.+.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~------~~~~~~~~~i~~~~~~~~------ 72 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEEIVALSG------ 72 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH------HHHHHHHHHHHHHHHHHC------
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch------hhHHHHHHHHHHHHHHhC------
Confidence 4478999999998764 237888999999999999999999999874 256888888888888874
Q ss_pred CCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 129 DLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 129 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
..+++++||||||.++..++..+|++ |+++|+++++.
T Consensus 73 ~~~v~lvGhS~GG~~a~~~a~~~p~~-v~~lv~i~~p~ 109 (285)
T 1ex9_A 73 QPKVNLIGHSHGGPTIRYVAAVRPDL-IASATSVGAPH 109 (285)
T ss_dssp CSCEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESCCT
T ss_pred CCCEEEEEECHhHHHHHHHHHhChhh-eeEEEEECCCC
Confidence 34899999999999999999999988 99999999854
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.8e-16 Score=120.54 Aligned_cols=203 Identities=12% Similarity=0.091 Sum_probs=122.8
Q ss_pred ceeEEEcC-CC-cEEEEEecCCCC---CcceEEEEecCCCCCcc-ccHHHHHHHH-hhCC---cEEEEecCCCCc-----
Q 020633 31 GKKYFETP-NG-KLFTQSFLPLDQ---KVKATVYMTHGYGSDTG-WMFQKICISF-ATWG---YAVFAADLLGHG----- 95 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~-~~~~~~~~~l-~~~g---~~v~~~d~~G~G----- 95 (323)
+...+.+. .| .+.+.+|.|.+- ++.|+|+++||.+.... ..+..+...+ .+.| +.|+++|+|+.+
T Consensus 19 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~ 98 (275)
T 2qm0_A 19 EQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGE 98 (275)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHH
T ss_pred eEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCccc
Confidence 44566665 56 899999998752 45699999999863111 0222233233 2346 999999998731
Q ss_pred -----CCCCCc-------------ccCCChHHHhhcH-HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCce
Q 020633 96 -----RSDGIR-------------CYLGDMEKVAASS-LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTW 156 (323)
Q Consensus 96 -----~s~~~~-------------~~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v 156 (323)
.+.... ......+.+.+.+ .+++..+.....++..+++++|||+||.+++.++.++|+. +
T Consensus 99 ~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~-f 177 (275)
T 2qm0_A 99 ERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA-F 177 (275)
T ss_dssp HHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG-C
T ss_pred ccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh-h
Confidence 111000 0001111222222 2334444444433346899999999999999999999998 9
Q ss_pred eEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHH
Q 020633 157 TGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARV 236 (323)
Q Consensus 157 ~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++++++|..... ... + .. . .. .+...
T Consensus 178 ~~~~~~s~~~~~~--------~~~-------~------------~~-~-~~------------------------~~~~~ 204 (275)
T 2qm0_A 178 QNYFISSPSIWWN--------NKS-------V------------LE-K-EE------------------------NLIIE 204 (275)
T ss_dssp SEEEEESCCTTHH--------HHG-------G------------GG-G-TT------------------------HHHHH
T ss_pred ceeEEeCceeeeC--------hHH-------H------------HH-H-HH------------------------HHHhh
Confidence 9999998763200 000 0 00 0 00 00000
Q ss_pred HHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHc---CC--CCccEEEecCCCcccc
Q 020633 237 CQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKA---SS--ADKSIKIYDGMYHSLI 292 (323)
Q Consensus 237 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~gH~~~ 292 (323)
. .......|+++++|+.|..++.+.++.+.+.+ .. .++++.++++++|+..
T Consensus 205 ---~--~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 205 ---L--NNAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp ---H--HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred ---h--cccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 0 02345689999999999888888888888877 32 2457889999999755
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.69 E-value=7.9e-17 Score=110.73 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=76.4
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
+...+| +++|...++ +++||++| ++.. .|..+ |++. |+|+++|+||||.|...... +++++++
T Consensus 6 ~~~~~g~~~~~~~~g~-----~~~vv~~H---~~~~-~~~~~---l~~~-~~v~~~d~~G~G~s~~~~~~---~~~~~~~ 69 (131)
T 2dst_A 6 YLHLYGLNLVFDRVGK-----GPPVLLVA---EEAS-RWPEA---LPEG-YAFYLLDLPGYGRTEGPRMA---PEELAHF 69 (131)
T ss_dssp EEEETTEEEEEEEECC-----SSEEEEES---SSGG-GCCSC---CCTT-SEEEEECCTTSTTCCCCCCC---HHHHHHH
T ss_pred EEEECCEEEEEEEcCC-----CCeEEEEc---CCHH-HHHHH---HhCC-cEEEEECCCCCCCCCCCCCC---HHHHHHH
Confidence 344577 998887764 46899999 2333 44444 6554 99999999999999765432 8889999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
+.++++.+.. .+++++|||+||.+++.+|.++|.
T Consensus 70 ~~~~~~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 70 VAGFAVMMNL------GAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHTTC------CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHcCC------CccEEEEEChHHHHHHHHHhcCCc
Confidence 9999988853 389999999999999999999874
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-17 Score=134.29 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=85.9
Q ss_pred CcceEEEEecCCCCCccccHHH-HHHHHhh-CCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGWMFQK-ICISFAT-WGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~-~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|+||++||++++....|.. +.+.|.+ .+|+|+++|+||+|.|.... ...+.+..++++.++++++....+.+.+
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~-~~~~~~~~a~~l~~ll~~L~~~~g~~~~ 146 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQ-AANNVRVVGAQVAQMLSMLSANYSYSPS 146 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchH-HHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 4579999999999875435654 5666655 47999999999999875221 1235677889999999998532222245
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+++|+||||||.+|..++..+|+ |.++++++|...
T Consensus 147 ~v~LVGhSlGg~vA~~~a~~~p~--v~~iv~Ldpa~p 181 (450)
T 1rp1_A 147 QVQLIGHSLGAHVAGEAGSRTPG--LGRITGLDPVEA 181 (450)
T ss_dssp GEEEEEETHHHHHHHHHHHTSTT--CCEEEEESCCCT
T ss_pred hEEEEEECHhHHHHHHHHHhcCC--cccccccCcccc
Confidence 89999999999999999999987 999999887653
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.4e-16 Score=126.83 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=84.2
Q ss_pred ceEEEEecCCCCCccccHH--HHHHHHhhC-CcEEEEecCCCCcCCCCCcc---------cCCChHHHhhcHHHHHHHHH
Q 020633 55 KATVYMTHGYGSDTGWMFQ--KICISFATW-GYAVFAADLLGHGRSDGIRC---------YLGDMEKVAASSLSFFKHVR 122 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~--~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~d~~~~l~~l~ 122 (323)
+.+||++||..++....+. .+...|++. |+.|+++|+||||+|.+... ...+.++.++|+..++++++
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~ 117 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLK 117 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHH
Confidence 4578888988876542221 233344443 68999999999999964321 11267899999999999998
Q ss_pred hcC-CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 123 DSE-PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 123 ~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+. .....+++++||||||.+|+.++.++|+. |.++|+.+++..
T Consensus 118 ~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~-v~g~i~ssapv~ 162 (446)
T 3n2z_B 118 RTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHM-VVGALAASAPIW 162 (446)
T ss_dssp HHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTT-CSEEEEETCCTT
T ss_pred HhcccCCCCCEEEEEeCHHHHHHHHHHHhhhcc-ccEEEEeccchh
Confidence 863 11245899999999999999999999999 999999776544
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.5e-16 Score=126.71 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=130.0
Q ss_pred ceeEEEcC-CC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCcE----EEEecCCCCc-CCCCCc
Q 020633 31 GKKYFETP-NG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGYA----VFAADLLGHG-RSDGIR 101 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~----v~~~d~~G~G-~s~~~~ 101 (323)
+...+.+. .| .+.+.+|.|.+ .++.|+|+++||.+......+..+++.|+++|+. |+++|.+|++ ++....
T Consensus 169 ~~~~~~S~~~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~ 248 (403)
T 3c8d_A 169 KEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELP 248 (403)
T ss_dssp EEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSS
T ss_pred EEEEEEccccCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCC
Confidence 44555544 45 88888888864 2567999999996432111234567788877765 9999998732 221100
Q ss_pred ccCCChHH-HhhcHHHHHHHHHhcCC--CCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH
Q 020633 102 CYLGDMEK-VAASSLSFFKHVRDSEP--YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 102 ~~~~~~~~-~~~d~~~~l~~l~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
....+.+ +++++...++ ..+. .+..+++|+|+||||.+++.++.++|+. +++++++++........
T Consensus 249 -~~~~~~~~l~~el~~~i~---~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~-f~~~~~~sg~~~~~~~~------ 317 (403)
T 3c8d_A 249 -CNADFWLAVQQELLPLVK---VIAPFSDRADRTVVAGQSFGGLSALYAGLHWPER-FGCVLSQSGSYWWPHRG------ 317 (403)
T ss_dssp -SCHHHHHHHHHTHHHHHH---HHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTT-CCEEEEESCCTTTTCTT------
T ss_pred -ChHHHHHHHHHHHHHHHH---HHCCCCCCCCceEEEEECHHHHHHHHHHHhCchh-hcEEEEeccccccCCCC------
Confidence 0011222 2344444444 3332 2356899999999999999999999998 99999998865321100
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.. .. ...... .. .........|+++++|+.
T Consensus 318 ----------------~~---------~~--------------------~~~~~~---~~--~~~~~~~~~~i~l~~G~~ 347 (403)
T 3c8d_A 318 ----------------GQ---------QE--------------------GVLLEK---LK--AGEVSAEGLRIVLEAGIR 347 (403)
T ss_dssp ----------------SS---------SC--------------------CHHHHH---HH--TTSSCCCSCEEEEEEESS
T ss_pred ----------------CC---------cH--------------------HHHHHH---HH--hccccCCCceEEEEeeCC
Confidence 00 00 000000 00 011234567899999998
Q ss_pred CcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
|..+ .+..+.+.+.+. +.++++.+++| +|... ........+..||.+..
T Consensus 348 D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~~~------~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 348 EPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL------CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp CHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH------HHHHHHHHHHHHHHGGG
T ss_pred Cchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCCHH------HHHHHHHHHHHHHhccc
Confidence 8644 567778888774 23578899998 68754 23335556677776543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.3e-17 Score=132.02 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=80.0
Q ss_pred CcceEEEEecCCCCCc-------cccHH----HHHHHHhhCCcEEEEecCCCCcCCCCCcc------------------c
Q 020633 53 KVKATVYMTHGYGSDT-------GWMFQ----KICISFATWGYAVFAADLLGHGRSDGIRC------------------Y 103 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~-------~~~~~----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------------------~ 103 (323)
+.+++|||+||++++. ...|. .+++.|.++||+|+++|+||+|.|..... .
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 4578999999998641 23564 58899988999999999999998752110 0
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh--------------------------cCCCcee
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ--------------------------SEPNTWT 157 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--------------------------~p~~~v~ 157 (323)
.++++.+++|+.++++.+.. ..+++|+||||||.++..++.. +|++ |+
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~-----~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~-V~ 203 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKP-----GHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNM-VT 203 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBT-----TBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSC-EE
T ss_pred cCCHHHHHHHHHHHHHHhCC-----CCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccc-ee
Confidence 11344455666666655431 2489999999999999998876 5778 99
Q ss_pred EEEEccCccc
Q 020633 158 GLIFSAPLFV 167 (323)
Q Consensus 158 ~~vl~~~~~~ 167 (323)
++|+++++..
T Consensus 204 slv~i~tP~~ 213 (431)
T 2hih_A 204 SITTIATPHN 213 (431)
T ss_dssp EEEEESCCTT
T ss_pred EEEEECCCCC
Confidence 9999998643
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.3e-13 Score=107.29 Aligned_cols=134 Identities=10% Similarity=0.078 Sum_probs=80.1
Q ss_pred cceeEEEcCC-C-cEEEEEecCCC---CCcceEEEEecCCCCCccccHHHHHHHHhh-CCcEEEEecCCCCc--------
Q 020633 30 NGKKYFETPN-G-KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQKICISFAT-WGYAVFAADLLGHG-------- 95 (323)
Q Consensus 30 ~~~~~~~~~~-g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G-------- 95 (323)
.+...+.+.. | ++.+.+|.|.+ .++.|+|+++||...... ....+.+.|+. .+..|++++.++-.
T Consensus 13 ~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~-~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~ 91 (278)
T 2gzs_A 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR-LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRA 91 (278)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH-CCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHH
T ss_pred eEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH-HHHHHHHHhccCCCeEEEEEcCCCCCcCcccccc
Confidence 3455666665 5 88888888764 134577666666542211 11234555655 56778888886421
Q ss_pred --CCCCC-c-----------ccCCChHHHhhcH-HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE
Q 020633 96 --RSDGI-R-----------CYLGDMEKVAASS-LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 96 --~s~~~-~-----------~~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v 160 (323)
.+... . ......+.+.+.+ .+++.++...+.++..+++|+||||||.+++.++.+ |+. +++++
T Consensus 92 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~-f~~~~ 169 (278)
T 2gzs_A 92 YDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSY-FRSYY 169 (278)
T ss_dssp HHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSS-CSEEE
T ss_pred cccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccc-cCeEE
Confidence 11110 0 0001122222222 233344455444445579999999999999999999 998 99999
Q ss_pred EccCcc
Q 020633 161 FSAPLF 166 (323)
Q Consensus 161 l~~~~~ 166 (323)
+++|..
T Consensus 170 ~~s~~~ 175 (278)
T 2gzs_A 170 SASPSL 175 (278)
T ss_dssp EESGGG
T ss_pred EeCcch
Confidence 998753
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=109.80 Aligned_cols=97 Identities=14% Similarity=0.225 Sum_probs=74.6
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+.+++++|+||++++.. .|..+...|. +.|+++|+|+ . . ...+++++++++.+.++.+.. ..++
T Consensus 44 ~~~~~l~~~hg~~g~~~-~~~~~~~~l~---~~v~~~~~~~--~--~---~~~~~~~~a~~~~~~i~~~~~-----~~~~ 107 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTT-VFHSLASRLS---IPTYGLQCTR--A--A---PLDSIHSLAAYYIDCIRQVQP-----EGPY 107 (316)
T ss_dssp CSSCCEEEECCTTCCSG-GGHHHHHHCS---SCEEEECCCT--T--S---CTTCHHHHHHHHHHHHTTTCS-----SCCC
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC---CCEEEEECCC--C--C---CcCCHHHHHHHHHHHHHHhCC-----CCCE
Confidence 44689999999998877 8999988884 8999999993 1 1 124788888888877765532 2479
Q ss_pred EEEEechhHHHHHHHhhhcCC--Cc---eeEEEEccCc
Q 020633 133 FLFGESMGGAATMLMYFQSEP--NT---WTGLIFSAPL 165 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~--~~---v~~~vl~~~~ 165 (323)
+++||||||.+|+.+|.+.++ .. +++++++++.
T Consensus 108 ~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 108 RVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred EEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 999999999999999987532 22 7788887765
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.1e-14 Score=112.97 Aligned_cols=102 Identities=13% Similarity=0.053 Sum_probs=70.7
Q ss_pred CcceEEEEecCCCCCcc------ccHH----HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH--
Q 020633 53 KVKATVYMTHGYGSDTG------WMFQ----KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH-- 120 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~------~~~~----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~-- 120 (323)
.++++|||+||++++.. .+|. .+++.|.++||+|+++|+||+|.|.. .+.++...++.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~----------~a~~l~~~i~~~~ 73 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD----------RACEAYAQLVGGT 73 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH----------HHHHHHHHHHCEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc----------cHHHHHHHHHhhh
Confidence 34678999999987642 1355 45589988999999999999997631 11222222221
Q ss_pred ------HH-----------------hcCCCCCCCeEEEEechhHHHHHHHhhh-------------------cC------
Q 020633 121 ------VR-----------------DSEPYRDLPGFLFGESMGGAATMLMYFQ-------------------SE------ 152 (323)
Q Consensus 121 ------l~-----------------~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-------------------~p------ 152 (323)
+. ... ...+++|+||||||.++..++.. +|
T Consensus 74 vDy~~~~a~~~~~~~~~~~l~~ll~~~~--~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 74 VDYGAAHAAKHGHARFGRTYPGLLPELK--RGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGGGG--TTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhccchhhhhhHHHHHHHhc--CCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 00 001 14589999999999999999972 24
Q ss_pred CCceeEEEEccCccc
Q 020633 153 PNTWTGLIFSAPLFV 167 (323)
Q Consensus 153 ~~~v~~~vl~~~~~~ 167 (323)
++ |+++|+++++..
T Consensus 152 ~~-V~sLV~i~tP~~ 165 (387)
T 2dsn_A 152 HF-VLSVTTIATPHD 165 (387)
T ss_dssp CC-EEEEEEESCCTT
T ss_pred cc-eeEEEEECCCCC
Confidence 56 999999998654
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-11 Score=97.84 Aligned_cols=113 Identities=11% Similarity=-0.061 Sum_probs=80.7
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecC-----------CCCcCCC---CCcccCCC
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADL-----------LGHGRSD---GIRCYLGD 106 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~-----------~G~G~s~---~~~~~~~~ 106 (323)
.+...++.|.+.++-|+||.+||... ....||.++.++. +|+|.=- +.......
T Consensus 124 sf~~~i~lP~g~~P~Pvii~~~~~~~------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~ga 191 (433)
T 4g4g_A 124 SFSASIRKPSGAGPFPAIIGIGGASI------------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGS 191 (433)
T ss_dssp EEEEEEECCSSSCCEEEEEEESCCCS------------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCH
T ss_pred EEEEEEECCCCCCCccEEEEECCCcc------------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHH
Confidence 56888888876566788888886321 1357999999986 2222100 11111224
Q ss_pred hHHHhhcHHHHHHHHHh----cCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 107 MEKVAASSLSFFKHVRD----SEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~----~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+..++-++..+|++|.. ...+|..+|.++|||+||..++.+++..+. |+.+|..++...
T Consensus 192 l~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~R--i~~vi~~~sg~~ 254 (433)
T 4g4g_A 192 LTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVDR--IALTIPQESGAG 254 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCTT
T ss_pred HHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCCc--eEEEEEecCCCC
Confidence 45566688889999988 666778899999999999999999998764 999999876543
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-11 Score=96.68 Aligned_cols=198 Identities=10% Similarity=-0.011 Sum_probs=114.2
Q ss_pred ceeEEEcC-CC-cEEEEEecCCC----CCcceEEEEecCCCCCccccHHHHHHHHhh------CCcEEEEecCCCCc--C
Q 020633 31 GKKYFETP-NG-KLFTQSFLPLD----QKVKATVYMTHGYGSDTGWMFQKICISFAT------WGYAVFAADLLGHG--R 96 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~------~g~~v~~~d~~G~G--~ 96 (323)
+...+.+. -| +..+.++.|.+ .++.|+|+++||.... . ....+.+.+.. .++.|++++..... .
T Consensus 13 ~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~f-~-~~~~~~~~l~~~~~~~~~~~IvV~i~~~~R~~dy 90 (331)
T 3gff_A 13 QSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQF-D-HMASLLQFLSQGTMPQIPKVIIVGIHNTNRMRDY 90 (331)
T ss_dssp EEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHHH-H-HHHHHHHHHTCSSSCSSCCCEEEEECCSSHHHHS
T ss_pred EEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhhh-H-HHHHHHHHHHhhhhcCCCCEEEEEECCCCccccc
Confidence 44455554 35 88888998875 2456899999995311 1 12234555543 25778887752110 0
Q ss_pred CCCC-------------cccCCChHHHhhcH-HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEc
Q 020633 97 SDGI-------------RCYLGDMEKVAASS-LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFS 162 (323)
Q Consensus 97 s~~~-------------~~~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~ 162 (323)
+... ......-+.+.+.+ .+++.++...+..+. ..+++||||||..++.++.++|+. +++++.+
T Consensus 91 tp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~-~r~i~G~S~GG~~al~~~~~~p~~-F~~~~~~ 168 (331)
T 3gff_A 91 TPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNG-INVLVGHSFGGLVAMEALRTDRPL-FSAYLAL 168 (331)
T ss_dssp CSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEE-EEEEEEETHHHHHHHHHHHTTCSS-CSEEEEE
T ss_pred CCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCC-CeEEEEECHHHHHHHHHHHhCchh-hheeeEe
Confidence 0000 00011223333322 234444555443323 347999999999999999999999 9999999
Q ss_pred cCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHh
Q 020633 163 APLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQD 242 (323)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (323)
+|....... . +.........
T Consensus 169 S~~~w~~~~-------------------------------------~-----------------------~~~~~~~~~~ 188 (331)
T 3gff_A 169 DTSLWFDSP-------------------------------------H-----------------------YLTLLEERVV 188 (331)
T ss_dssp SCCTTTTTT-------------------------------------H-----------------------HHHHHHHHHH
T ss_pred CchhcCChH-------------------------------------H-----------------------HHHHHHHHhh
Confidence 886421100 0 0000000111
Q ss_pred cCCCCCcCEEEEeeCCCc-------ccCchhHHHHHHHcC-----CCCccEEEecCCCcccc
Q 020633 243 NFSKVTVPFLTVHGTADG-------VTCPTSSKLLYEKAS-----SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 243 ~~~~~~~P~l~i~g~~D~-------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~ 292 (323)
.......|+++.+|+.|. .++.+.++++.+.+. +-++++.++++.+|...
T Consensus 189 ~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 189 KGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp HCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTH
T ss_pred cccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCcccc
Confidence 112246799999999998 345555566666553 12467889999999876
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.6e-11 Score=94.25 Aligned_cols=113 Identities=13% Similarity=-0.027 Sum_probs=80.3
Q ss_pred cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecC--------C---CCcCCC---CCcccCC
Q 020633 41 KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADL--------L---GHGRSD---GIRCYLG 105 (323)
Q Consensus 41 ~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~--------~---G~G~s~---~~~~~~~ 105 (323)
.+...++.|.+ .++-|+||-+||.... ..+||.++.++. + |+|.=. +......
T Consensus 91 ~~~~~i~lP~~~~~p~Pvii~i~~~~~~------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~g 158 (375)
T 3pic_A 91 SFTVTITYPSSGTAPYPAIIGYGGGSLP------------APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAG 158 (375)
T ss_dssp EEEEEEECCSSSCSSEEEEEEETTCSSC------------CCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCC
T ss_pred EEEEEEECCCCCCCCccEEEEECCCccc------------cCCCeEEEEecccccccccCCCCccceecccccCCccchH
Confidence 67888888875 3456788888884211 357999999975 1 222100 1011122
Q ss_pred ChHHHhhcHHHHHHHHHhcC--CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 106 DMEKVAASSLSFFKHVRDSE--PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~--~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.+..++-++..+|++|.... .+|..+|.++|||+||..|+.+++..+ + |+.+|..++...
T Consensus 159 al~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-R-i~~~v~~~~g~~ 220 (375)
T 3pic_A 159 AMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-R-IVLTLPQESGAG 220 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-T-EEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-c-eEEEEeccCCCC
Confidence 45556668999999998876 678889999999999999999999876 4 999999876543
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.2e-11 Score=100.91 Aligned_cols=123 Identities=15% Similarity=0.040 Sum_probs=80.5
Q ss_pred cEEEEEecCCC-CCcceEEEEecCCC---CCccccHHHHHHHHhhC-CcEEEEecCC----CCcCCCCCcccCCChHHHh
Q 020633 41 KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISFATW-GYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~-~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
.|...+|.|.. .++.|+||++||++ ++.. .+......|+++ |+.|+.+|+| |++.+...... .....-.
T Consensus 82 cL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~-~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~gl 159 (489)
T 1qe3_A 82 CLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGS-EPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEA-YSDNLGL 159 (489)
T ss_dssp CCEEEEEEECSSCCSEEEEEEECCSTTTSCCTT-SGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTT-SCSCHHH
T ss_pred CCEEEEEeCCCCCCCCCEEEEECCCccccCCCC-CcccCHHHHHhcCCEEEEecCccCcccccCcccccccc-CCCCcch
Confidence 46666777753 23479999999976 2222 222234556665 4999999999 56554321110 1222334
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCcc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~ 166 (323)
.|...+++++... .+.+..+|.|+|+|+||.++..++... +.. ++++|+.++..
T Consensus 160 ~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~ 218 (489)
T 1qe3_A 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGL-FQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS-CSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccch-HHHHHHhCCCC
Confidence 6677777776553 233466899999999999988877653 456 99999998865
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.4e-09 Score=82.64 Aligned_cols=135 Identities=15% Similarity=0.119 Sum_probs=79.9
Q ss_pred ceeEEEcC-CC-cEEEEEecCCC--------CCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCCcCC
Q 020633 31 GKKYFETP-NG-KLFTQSFLPLD--------QKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~--------~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
....+.+. -| +..+.+|.|++ .++-|+|.++||.+++.. .|.. +.+.+.+.+..++.+|..-.+..
T Consensus 15 ~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~ 93 (299)
T 4fol_A 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDE 93 (299)
T ss_dssp EEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEEECSSCCSTT
T ss_pred EEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChH-HHHHhchHhHHHHHcCchhhccCCCcceee
Confidence 33444443 34 88888888853 134699999999998765 4432 23344455788888875321110
Q ss_pred ----------------CCCc------ccCCCh-HHHhhcHHHHHHHHHhcCC----CCCCCeEEEEechhHHHHHHHhhh
Q 020633 98 ----------------DGIR------CYLGDM-EKVAASSLSFFKHVRDSEP----YRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 98 ----------------~~~~------~~~~~~-~~~~~d~~~~l~~l~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.... ...+.+ ..+++++..+|+..-.... .+.++..|.||||||.-|+.++.+
T Consensus 94 ~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~ 173 (299)
T 4fol_A 94 VANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLK 173 (299)
T ss_dssp SCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHH
T ss_pred cCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHh
Confidence 0000 000122 2345666666654321110 012468999999999999999998
Q ss_pred c--CCCceeEEEEccCccc
Q 020633 151 S--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 151 ~--p~~~v~~~vl~~~~~~ 167 (323)
+ |.. ..++...+|...
T Consensus 174 ~~~~~~-~~~~~s~s~~~~ 191 (299)
T 4fol_A 174 GYSGKR-YKSCSAFAPIVN 191 (299)
T ss_dssp TGGGTC-CSEEEEESCCCC
T ss_pred CCCCCc-eEEEEecccccC
Confidence 5 566 777777776654
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.19 E-value=5.6e-11 Score=99.67 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=84.9
Q ss_pred cEEEEEecCCC-CCcceEEEEecCCC---CCccccHHHHHHHHhhCC-cEEEEecCC----CCcCCCCCcc--cCCChHH
Q 020633 41 KLFTQSFLPLD-QKVKATVYMTHGYG---SDTGWMFQKICISFATWG-YAVFAADLL----GHGRSDGIRC--YLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~-~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g-~~v~~~d~~----G~G~s~~~~~--~~~~~~~ 109 (323)
-|...+|.|.. .++.|+||++||++ ++.. ........|+++| +.|+++|+| |++.+..... .......
T Consensus 84 cl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~ 162 (498)
T 2ogt_A 84 GLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGS-SPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNL 162 (498)
T ss_dssp CCEEEEEESCSSSCCEEEEEEECCSTTTSCCTT-CGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGH
T ss_pred CcEEEEEecCCCCCCCcEEEEEcCCccCCCCCC-CCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCc
Confidence 35555666653 25679999999987 3333 2222245666665 999999999 8877754221 1123344
Q ss_pred HhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 110 VAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
-..|...+++++... .+.+..+|.|+|+|.||.+++.++... ... ++++|+.++...
T Consensus 163 gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~~ 224 (498)
T 2ogt_A 163 GILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGL-FRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTS-CSEEEEESCCTT
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccch-hheeeeccCCcc
Confidence 567777888877654 234567899999999999988877653 445 999999988654
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=91.14 Aligned_cols=148 Identities=11% Similarity=-0.005 Sum_probs=86.6
Q ss_pred CCCCCeEEEEechhHHHHHHHhhhcCCCcee-EEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccccccc
Q 020633 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWT-GLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 127 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
++..+|+|.|+|+||.+++.++..+|+. ++ +++++++.......... ...... . ......
T Consensus 8 iD~~RI~v~G~S~GG~mA~~~a~~~p~~-fa~g~~v~ag~p~~~~~~~~---------~~~~~~-~--------~~~~~~ 68 (318)
T 2d81_A 8 VNPNSVSVSGLASGGYMAAQLGVAYSDV-FNVGFGVFAGGPYDCARNQY---------YTSCMY-N--------GYPSIT 68 (318)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHTTTT-SCSEEEEESCCCTTTTSSSC---------GGGGST-T--------CCCCCH
T ss_pred cCcceEEEEEECHHHHHHHHHHHHCchh-hhccceEEecccccccchHH---------HHHHhh-c--------cCCCCC
Confidence 3466899999999999999999999998 88 87776653211100000 000000 0 000000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC-CcCEEEEeeCCCcccCchhHHHHHHHcCCC----Ccc
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVHGTADGVTCPTSSKLLYEKASSA----DKS 280 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~ 280 (323)
............ ....+.++ ..|++++||++|.+||++.++++.+.+... +++
T Consensus 69 ~~~~~~~~~~~~----------------------~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve 126 (318)
T 2d81_A 69 TPTANMKSWSGN----------------------QIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVS 126 (318)
T ss_dssp HHHHHHHHHBTT----------------------TBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEE
T ss_pred CHHHHHHHhhcc----------------------cCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceE
Confidence 000000000000 01112222 469999999999999999999999887432 468
Q ss_pred EEEecCCCcccccCCC--c--hh-----------HHHHHHHHHHHHHHHH
Q 020633 281 IKIYDGMYHSLIQGEP--D--EN-----------ANLVLKDMREWIDERV 315 (323)
Q Consensus 281 ~~~~~~~gH~~~~~~~--~--~~-----------~~~~~~~i~~fl~~~~ 315 (323)
+++++++||.+..... . .. .-.-...|.+||...+
T Consensus 127 ~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 127 YVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp EEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCHHHHHHHHHHSSC
T ss_pred EEEeCCCCCCCccCCcccCccccccCCCCcccCCCChHHHHHHHHHhccC
Confidence 8899999999875443 1 00 1235567888886554
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=2.7e-09 Score=90.55 Aligned_cols=124 Identities=14% Similarity=0.060 Sum_probs=78.8
Q ss_pred CCCcEEEEEecCCC--CCcceEEEEecCCCCC---ccccHHHHHHHHhh-CCcEEEEecCC----CCcCCCCCcccCCCh
Q 020633 38 PNGKLFTQSFLPLD--QKVKATVYMTHGYGSD---TGWMFQKICISFAT-WGYAVFAADLL----GHGRSDGIRCYLGDM 107 (323)
Q Consensus 38 ~~g~l~~~~~~~~~--~~~~~~vv~~HG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~~~~~~~~ 107 (323)
.|. |...+|.|.. .++.|+||++||++.. .. ........|+. .|+.|+++|+| |++.+...... ..
T Consensus 94 edc-l~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~--~~ 169 (543)
T 2ha2_A 94 EDC-LYLNVWTPYPRPASPTPVLIWIYGGGFYSGAAS-LDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREA--PG 169 (543)
T ss_dssp SCC-CEEEEEEESSCCSSCEEEEEEECCSTTTCCCTT-SGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSC--CS
T ss_pred CcC-CeEEEeecCCCCCCCCeEEEEECCCccccCCCC-CCcCChHHHHhcCCEEEEEecccccccccccCCCCCCC--CC
Confidence 444 4444555543 2346999999998632 22 11112345554 68999999999 44443211111 22
Q ss_pred HHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCcc
Q 020633 108 EKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~ 166 (323)
..-..|...++++++.. .+.|..+|.|+|+|.||.++..++... +.. ++++|+.++..
T Consensus 170 n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~ 232 (543)
T 2ha2_A 170 NVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL-FHRAVLQSGTP 232 (543)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTT-CSEEEEESCCS
T ss_pred cccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHh-HhhheeccCCc
Confidence 33457777777777654 234567999999999999988776653 355 89999988754
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=91.81 Aligned_cols=123 Identities=17% Similarity=0.092 Sum_probs=79.9
Q ss_pred cEEEEEecCCCC-CcceEEEEecCCCC---CccccHHHHHHHHhh-CCcEEEEecCC----CCcCCCCCcccCCChHHHh
Q 020633 41 KLFTQSFLPLDQ-KVKATVYMTHGYGS---DTGWMFQKICISFAT-WGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|...+|.|... ++.|+||++||++. +.. ........|++ .|+.|+++++| |++.+...... ....-.
T Consensus 92 cl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~--~~n~gl 168 (529)
T 1p0i_A 92 CLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSS-LHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEA--PGNMGL 168 (529)
T ss_dssp CCEEEEEEESSCCSSEEEEEEECCSTTTSCCTT-CGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS--CSCHHH
T ss_pred CCeEEEeeCCCCCCCCeEEEEECCCccccCCCC-ccccChHHHhccCCeEEEEecccccccccccCCCCCCC--cCcccH
Confidence 355556666542 45799999999762 222 11112345555 58999999999 44444221111 223345
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
.|...++++++.. .+.|..+|.|+|+|.||.++..++... ... ++++|+.++...
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~Sg~~~ 228 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSL-FTRAILQSGSFN 228 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGG-CSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHH-HHHHHHhcCccc
Confidence 6777777777653 344567899999999999998877653 344 899999988653
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-08 Score=75.55 Aligned_cols=133 Identities=17% Similarity=0.106 Sum_probs=92.9
Q ss_pred eEEEcC--CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccH-HHHHH------------------HHhhCCcEEEEe
Q 020633 33 KYFETP--NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMF-QKICI------------------SFATWGYAVFAA 89 (323)
Q Consensus 33 ~~~~~~--~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~-~~~~~------------------~l~~~g~~v~~~ 89 (323)
-++... .+ .++|+.+...+ ...+|++|+++|+++.++ .+ ..+.+ .+.+. ..++.+
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anvlfi 99 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSS-VAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANVLFL 99 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCT-TTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEEEEE
T ss_pred EEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHH-HHHHHHhccCCeEecCCCCeeeeCccccccc-CCEEEE
Confidence 344443 56 89999887653 256899999999998876 44 33321 12223 689999
Q ss_pred cCC-CCcCCCCCcc--c-CCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc-----CCCceeEE
Q 020633 90 DLL-GHGRSDGIRC--Y-LGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS-----EPNTWTGL 159 (323)
Q Consensus 90 d~~-G~G~s~~~~~--~-~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~ 159 (323)
|.| |.|.|..... . ..+.++.++|+..+++..-.+.+ ....+++|.|+|+||..+..+|..- +..+++++
T Consensus 100 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi 179 (255)
T 1whs_A 100 DSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGF 179 (255)
T ss_dssp CCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred ecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceE
Confidence 964 9999854322 2 24678888999888887665432 2246899999999999888777641 22348999
Q ss_pred EEccCccc
Q 020633 160 IFSAPLFV 167 (323)
Q Consensus 160 vl~~~~~~ 167 (323)
++.+|..+
T Consensus 180 ~ign~~~d 187 (255)
T 1whs_A 180 MVGNGLID 187 (255)
T ss_dssp EEEEECCB
T ss_pred EecCCccC
Confidence 99998775
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.95 E-value=2.2e-09 Score=90.87 Aligned_cols=123 Identities=16% Similarity=0.058 Sum_probs=80.0
Q ss_pred cEEEEEecCCCC-CcceEEEEecCCCCC---ccccHHHHHHHHh-hCCcEEEEecCC----CCcCCCCCcccCCChHHHh
Q 020633 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD---TGWMFQKICISFA-TWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~HG~~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
-|...+|.|... ++.|+||++||++.. .. ........|+ +.|+.|+++++| |+..+...... ....-.
T Consensus 94 cl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~--~~n~gl 170 (537)
T 1ea5_A 94 CLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSST-LDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEA--PGNVGL 170 (537)
T ss_dssp CCEEEEEECSSCCSSEEEEEEECCSTTTCCCTT-CGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSS--CSCHHH
T ss_pred CCeEEEeccCCCCCCCeEEEEECCCcccCCCCC-CCccChHHHHhcCCEEEEEeccCccccccccCCCCCCC--cCcccc
Confidence 355556666542 567999999997632 22 1111234555 568999999999 44443211111 223345
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
.|...++++++.. .+.|..+|.|+|+|.||.++..++.. .... ++++|+.++...
T Consensus 171 ~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~Sg~~~ 230 (537)
T 1ea5_A 171 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDL-FRRAILQSGSPN 230 (537)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTT-CSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhh-hhhheeccCCcc
Confidence 7777777777654 23456799999999999998877765 2345 999999988654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.93 E-value=3.3e-08 Score=81.27 Aligned_cols=136 Identities=19% Similarity=0.136 Sum_probs=87.9
Q ss_pred ccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH------------------HHhhCCcEEEE
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI------------------SFATWGYAVFA 88 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~------------------~l~~~g~~v~~ 88 (323)
.....++...++ .++|+.+...+ +..+|+||++||++|.++ .+..+.+ .+.+ -..++.
T Consensus 20 ~~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss-~~g~~~e~GP~~~~~~~~~l~~n~~sw~~-~~~~lf 97 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLY 97 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEE
T ss_pred eeeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEEeCCCceeeeCCCcccc-cccEEE
Confidence 344567777777 99999887653 245799999999998876 4432221 0123 378999
Q ss_pred ecC-CCCcCCCCCcc-cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh----cCCCceeEEEE
Q 020633 89 ADL-LGHGRSDGIRC-YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ----SEPNTWTGLIF 161 (323)
Q Consensus 89 ~d~-~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~vl 161 (323)
+|. +|.|.|..... ...+-...++|+..+++..-...+ ....+++|+|+|+||..+..+|.. .+-. ++++++
T Consensus 98 iDqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~-l~g~~i 176 (452)
T 1ivy_A 98 LESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMN-LQGLAV 176 (452)
T ss_dssp ECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSC-EEEEEE
T ss_pred EecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccc-cceEEe
Confidence 996 69999963322 112334455655444443333221 225689999999999965555543 2334 999999
Q ss_pred ccCccc
Q 020633 162 SAPLFV 167 (323)
Q Consensus 162 ~~~~~~ 167 (323)
.+|..+
T Consensus 177 gn~~~d 182 (452)
T 1ivy_A 177 GNGLSS 182 (452)
T ss_dssp ESCCSB
T ss_pred cCCccC
Confidence 998765
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.4e-09 Score=90.83 Aligned_cols=120 Identities=15% Similarity=0.165 Sum_probs=78.1
Q ss_pred cEEEEEecCCCC---CcceEEEEecCCCCC---ccccHHHHHHHHh-hCCcEEEEecCC----CCcCCCCCcccCCChHH
Q 020633 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSD---TGWMFQKICISFA-TWGYAVFAADLL----GHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~HG~~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~ 109 (323)
-|...+|.|... ++.|+||++||++.. .. .|.. ..|+ ..|+.|+++|+| |++.+.... . ....
T Consensus 98 cl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~-~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~-~--~~n~ 171 (542)
T 2h7c_A 98 CLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAS-TYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEH-S--RGNW 171 (542)
T ss_dssp CCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCST-TSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTT-C--CCCH
T ss_pred CcEEEEEECCCCCCCCCCCEEEEECCCcccCCCcc-ccCH--HHHHhcCCEEEEecCCCCccccCCCCCccc-C--ccch
Confidence 355566777542 457999999997532 22 2221 1244 368999999999 444432211 1 1122
Q ss_pred HhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 110 VAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
-..|...++++++.. .+.|..+|.|+|+|.||.++..++.. .+.. ++++|+.++...
T Consensus 172 gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~l-f~~ai~~Sg~~~ 233 (542)
T 2h7c_A 172 GHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL-FHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTS-CSEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHH-HHHHhhhcCCcc
Confidence 346777777777653 33456799999999999999888776 3556 999999887543
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.7e-09 Score=91.88 Aligned_cols=107 Identities=14% Similarity=0.021 Sum_probs=72.7
Q ss_pred ceEEEEecCCCC---CccccHHHHHHHHhhCCcEEEEecCCC----CcCCCCCcccCCChHHHhhcHHHHHHHHHhc---
Q 020633 55 KATVYMTHGYGS---DTGWMFQKICISFATWGYAVFAADLLG----HGRSDGIRCYLGDMEKVAASSLSFFKHVRDS--- 124 (323)
Q Consensus 55 ~~~vv~~HG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--- 124 (323)
.|+||++||++. +.. ........|++.|+.|+++|+|. +..+... . .....-..|...++++++..
T Consensus 115 ~Pviv~iHGGg~~~g~~~-~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~-~--~~~n~gl~D~~~al~wv~~~i~~ 190 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGD-SDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNST-S--VPGNAGLRDMVTLLKWVQRNAHF 190 (551)
T ss_dssp EEEEEEECCSTTTSCCSC-TTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSS-S--CCSCHHHHHHHHHHHHHHHHTGG
T ss_pred CCEEEEEcCCccccCCCc-ccccCHHHHHhCCeEEEEeCCcCCccccccCccc-C--CCCchhHHHHHHHHHHHHHHHHH
Confidence 799999999652 222 11123456777899999999994 2222111 1 12233457777777777654
Q ss_pred CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCcc
Q 020633 125 EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~ 166 (323)
.+.|..+|.|+|+|.||.++..++.. .+.. ++++|+.++..
T Consensus 191 fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~l-f~~~i~~sg~~ 233 (551)
T 2fj0_A 191 FGGRPDDVTLMGQSAGAAATHILSLSKAADGL-FRRAILMSGTS 233 (551)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS-CSEEEEESCCT
T ss_pred hCCChhhEEEEEEChHHhhhhccccCchhhhh-hhheeeecCCc
Confidence 33456789999999999999888776 3455 99999988754
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.81 E-value=4e-09 Score=89.01 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=77.7
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCCcc--ccH--HHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHH
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMF--QKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEK 109 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~--~~~--~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~ 109 (323)
-|...+|.|.+ .++.|+||++||++.... ..+ ..++.. ...|+.|+++|+| |++.+...... .....
T Consensus 85 cl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~-~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~ 162 (522)
T 1ukc_A 85 CLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQA-SDDVIVFVTFNYRVGALGFLASEKVRQN-GDLNA 162 (522)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHH-TTSCCEEEEECCCCHHHHHCCCHHHHHS-SCTTH
T ss_pred CCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHh-cCCcEEEEEecccccccccccchhcccc-CCCCh
Confidence 35556666643 245799999999863211 122 222211 2568999999999 44443211100 12344
Q ss_pred HhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc----CCCceeEEEEccCccc
Q 020633 110 VAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 110 ~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~vl~~~~~~ 167 (323)
-..|...++++++.. .+.|..+|.|+|+|.||..+..++... +.. ++++|+.++...
T Consensus 163 gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~l-f~~~i~~sg~~~ 226 (522)
T 1ukc_A 163 GLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGL-FIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSS-CSEEEEESCCCC
T ss_pred hHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCcccccc-chhhhhcCCCcC
Confidence 567788888887654 234567999999999998766655443 445 899999887643
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.78 E-value=8.4e-08 Score=90.23 Aligned_cols=209 Identities=12% Similarity=0.047 Sum_probs=111.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
.+.++++|+.++... .|..++..|. .+.|++++.+ +.+..++...+.++.+.. ..++.+
T Consensus 1058 ~~~L~~l~~~~g~~~-~y~~la~~L~--~~~v~~l~~~-------------~~~~~~~~~~~~i~~~~~-----~gp~~l 1116 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGL-MYQNLSSRLP--SYKLCAFDFI-------------EEEDRLDRYADLIQKLQP-----EGPLTL 1116 (1304)
T ss_dssp CCEEECCCCTTCBGG-GGHHHHTTCC--SCEEEECBCC-------------CSTTHHHHHHHHHHHHCC-----SSCEEE
T ss_pred CCcceeecccccchH-HHHHHHhccc--ccceEeeccc-------------CHHHHHHHHHHHHHHhCC-----CCCeEE
Confidence 568999999988766 7888887775 4889988763 233444445555555432 348999
Q ss_pred EEechhHHHHHHHhhhc---CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHH
Q 020633 135 FGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (323)
+|||+||.+|..+|.+. ... +..++++++....................+...... .........
T Consensus 1117 ~G~S~Gg~lA~e~A~~L~~~g~~-v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~l------ 1184 (1304)
T 2vsq_A 1117 FGYSAGCSLAFEAAKKLEEQGRI-VQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRD-----NEALNSEAV------ 1184 (1304)
T ss_dssp EEETTHHHHHHHHHHHHHHSSCC-EEEEEEESCCEECSCC-----CHHHHHHHHHTTCC------------CTT------
T ss_pred EEecCCchHHHHHHHHHHhCCCc-eeEEEEecCcccccccccccccchhhHHHHHHhhhh-----hhhhcchhc------
Confidence 99999999999988763 334 888888876543221100000000000000000000 000000000
Q ss_pred HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccc
Q 020633 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSL 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (323)
.................... ...+++|++++.|+.|.. +.+....+.+.. ....+++.++| +|+.
T Consensus 1185 -----------~~~~l~~~~~~~~~~~~~~~-~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~-~~~~~~~~v~G-~H~~ 1249 (1304)
T 2vsq_A 1185 -----------KHGLKQKTHAFYSYYVNLIS-TGQVKADIDLLTSGADFD-IPEWLASWEEAT-TGVYRMKRGFG-THAE 1249 (1304)
T ss_dssp -----------TGGGHHHHHHHHHHHHC------CBSSEEEEEECSSCCC-CCSSEECSSTTB-SSCCCEEECSS-CTTG
T ss_pred -----------chHHHHHHHHHHHHHHHHhc-cCCcCCCEEEEEecCccc-cccchhhHHHHh-CCCeEEEEeCC-CHHH
Confidence 00011111111111111111 156789999999998863 223222233222 24567888885 8988
Q ss_pred ccCCCchhHHHHHHHHHHHHHH
Q 020633 292 IQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+++. ...+.+.+.|.+||.+
T Consensus 1250 ml~~--~~~~~~a~~l~~~L~~ 1269 (1304)
T 2vsq_A 1250 MLQG--ETLDRNAEILLEFLNT 1269 (1304)
T ss_dssp GGSH--HHHHHHHHHHHHHHHC
T ss_pred HCCC--HHHHHHHHHHHHHHhc
Confidence 8642 3456678888888864
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.8e-07 Score=77.83 Aligned_cols=110 Identities=18% Similarity=0.181 Sum_probs=80.6
Q ss_pred ceEEEEecCCCCCccccHH--HHHHHHhhC-CcEEEEecCCCCcCCCCCc--------ccCCChHHHhhcHHHHHHHHHh
Q 020633 55 KATVYMTHGYGSDTGWMFQ--KICISFATW-GYAVFAADLLGHGRSDGIR--------CYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~--~~~~~l~~~-g~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
+|++|++.|=+ ....... .+...++++ |-.++.++.|-+|.|.+.. -...+.++.+.|+..++++++.
T Consensus 43 gPIfl~~gGEg-~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~ 121 (472)
T 4ebb_A 43 GPIFFYTGNEG-DVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 121 (472)
T ss_dssp CCEEEEECCSS-CHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCc-cccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHh
Confidence 56666665533 3221111 122333333 6789999999999997521 1124789999999999999998
Q ss_pred cCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 124 SEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 124 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
+......|++++|-|+||++|..+-.++|+. |.+.+..+++.
T Consensus 122 ~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l-v~ga~ASSApv 163 (472)
T 4ebb_A 122 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL-VAGALAASAPV 163 (472)
T ss_dssp HTTCTTCCEEEEEETHHHHHHHHHHHHCTTT-CSEEEEETCCT
T ss_pred hcCCCCCCEEEEccCccchhhHHHHhhCCCe-EEEEEecccce
Confidence 8765567999999999999999999999999 88888876654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-08 Score=84.30 Aligned_cols=125 Identities=14% Similarity=0.032 Sum_probs=77.3
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCCc---c-ccHHHHHH-HHh-hCCcEEEEecCCCC--cCCCCCc-ccCCChH
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDT---G-WMFQKICI-SFA-TWGYAVFAADLLGH--GRSDGIR-CYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~~---~-~~~~~~~~-~l~-~~g~~v~~~d~~G~--G~s~~~~-~~~~~~~ 108 (323)
-|...+|.|.+ .++.|+||++||++... . +....++. .++ ..|+.|+++|+|.- |.-.... .......
T Consensus 97 cl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n 176 (534)
T 1llf_A 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGN 176 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCc
Confidence 46666777754 24579999999987332 2 11123332 232 35899999999942 2111000 0001233
Q ss_pred HHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--------CCCceeEEEEccCcc
Q 020633 109 KVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~vl~~~~~ 166 (323)
.-..|...++++++.. .+.|..+|.|+|+|.||..+..++... +.. ++++|+.++..
T Consensus 177 ~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~l-f~~ai~~Sg~~ 244 (534)
T 1llf_A 177 AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPL-FRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEES-CSEEEEESCCS
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccch-hHhHhhhccCc
Confidence 4467888888888653 334567999999999998776655542 344 89999988743
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.70 E-value=8.5e-09 Score=87.41 Aligned_cols=125 Identities=14% Similarity=0.047 Sum_probs=76.4
Q ss_pred cEEEEEecCCC---CCcceEEEEecCCCCCcc--ccH--HHHHH-HHhh-CCcEEEEecCCCC--cCCCCCc-ccCCChH
Q 020633 41 KLFTQSFLPLD---QKVKATVYMTHGYGSDTG--WMF--QKICI-SFAT-WGYAVFAADLLGH--GRSDGIR-CYLGDME 108 (323)
Q Consensus 41 ~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~--~~~--~~~~~-~l~~-~g~~v~~~d~~G~--G~s~~~~-~~~~~~~ 108 (323)
-|...+|.|.. .++.|+||++||++.... ..+ ..++. .++. .|+.|+++|+|.- |.-.... .......
T Consensus 105 cl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n 184 (544)
T 1thg_A 105 CLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTN 184 (544)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTT
T ss_pred CeEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCc
Confidence 35556666653 245799999999864321 122 22332 3332 4799999999942 1111000 0001223
Q ss_pred HHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--------CCCceeEEEEccCcc
Q 020633 109 KVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~vl~~~~~ 166 (323)
.-..|...++++++.. .+.|..+|.|+|+|.||.++..++... ... ++++|+.++..
T Consensus 185 ~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~l-f~~~i~~Sg~~ 252 (544)
T 1thg_A 185 AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKL-FHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEES-CSEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCcccccccccc-ccceEEecccc
Confidence 3457778888877654 234567999999999999887766542 334 89999988743
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4.1e-08 Score=84.06 Aligned_cols=112 Identities=11% Similarity=-0.102 Sum_probs=70.9
Q ss_pred CcceEEEEecCCCCC---ccccHHHHHHHHhh-CCcEEEEecCC----CCcCCCCC----cccCCChHHHhhcHHHHHHH
Q 020633 53 KVKATVYMTHGYGSD---TGWMFQKICISFAT-WGYAVFAADLL----GHGRSDGI----RCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~----~~~~~~~~~~~~d~~~~l~~ 120 (323)
++.|+||++||++.. .. ........|+. .|+.|+++|+| |+...... .........-..|...++++
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~-~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSAT-LDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTT-CGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCC-CCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 457999999997632 21 11111234544 58999999999 44332110 00011223345788888888
Q ss_pred HHhcC---CCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCcc
Q 020633 121 VRDSE---PYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLF 166 (323)
Q Consensus 121 l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~ 166 (323)
++..- +.|+.+|.|+|+|.||..+..++... ... ++++|+.++..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~l-f~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGL-VKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTS-CCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccch-hHhhhhhcccc
Confidence 87652 34567899999999999887766542 244 88999987754
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.2e-08 Score=84.51 Aligned_cols=119 Identities=13% Similarity=0.164 Sum_probs=75.2
Q ss_pred cEEEEEecCCCC------CcceEEEEecCCCCCcc--ccHHHHHHHHhhC-CcEEEEecCC----CCcCCCCCcccCCCh
Q 020633 41 KLFTQSFLPLDQ------KVKATVYMTHGYGSDTG--WMFQKICISFATW-GYAVFAADLL----GHGRSDGIRCYLGDM 107 (323)
Q Consensus 41 ~l~~~~~~~~~~------~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~-g~~v~~~d~~----G~G~s~~~~~~~~~~ 107 (323)
-|...+|.|... ++.|+||++||++.... ..+.. ..|+.. |+.|+++|+| |+..+... .. ..
T Consensus 111 cL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~-~~--~~ 185 (574)
T 3bix_A 111 CLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQ-AA--KG 185 (574)
T ss_dssp CCEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSS-SC--CC
T ss_pred CCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCC-CC--CC
Confidence 355566666531 35799999999863321 12222 345544 6999999999 33322211 11 22
Q ss_pred HHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhcC---CCceeEEEEccCc
Q 020633 108 EKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQSE---PNTWTGLIFSAPL 165 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~v~~~vl~~~~ 165 (323)
..-..|...+++++... .+.+..+|.|+|+|.||.++..++.... .. ++++|+.++.
T Consensus 186 n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~gl-f~~aI~~Sg~ 248 (574)
T 3bix_A 186 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGL-FQRAIAQSGT 248 (574)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTS-CCEEEEESCC
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhH-HHHHHHhcCC
Confidence 33457777777777653 3345678999999999999988776543 34 7888887753
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3.3e-06 Score=64.83 Aligned_cols=138 Identities=17% Similarity=0.123 Sum_probs=95.3
Q ss_pred cccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHH------------------HhhCCcEEE
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICIS------------------FATWGYAVF 87 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~------------------l~~~g~~v~ 87 (323)
+....-++...++ .|+|+.+...+ ...+|+||++.|+++.++ .+..+.+. +.+. ..++
T Consensus 21 ~~~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS-~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~-an~l 98 (300)
T 4az3_A 21 FRQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVL 98 (300)
T ss_dssp SCEEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSSCEEECTTCGGGS-SEEE
T ss_pred cceeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHhcCCCceecCCCccccccCccHHhh-hcch
Confidence 3444566777778 99999987654 356899999999998776 55333220 1111 5789
Q ss_pred EecCC-CCcCCCCCc-ccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh---cCCCceeEEEE
Q 020633 88 AADLL-GHGRSDGIR-CYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIF 161 (323)
Q Consensus 88 ~~d~~-G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl 161 (323)
.+|.| |.|.|-... ....+..+.+.|+..+++..-...+ ....+++|.|.|+||..+-.+|.. .+..+++++++
T Consensus 99 fiD~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~i 178 (300)
T 4az3_A 99 YLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAV 178 (300)
T ss_dssp EECCSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEE
T ss_pred hhcCCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCccccccee
Confidence 99977 888885432 2233567777888877765544432 335689999999999988877764 34445899999
Q ss_pred ccCccc
Q 020633 162 SAPLFV 167 (323)
Q Consensus 162 ~~~~~~ 167 (323)
.++..+
T Consensus 179 GNg~~d 184 (300)
T 4az3_A 179 GNGLSS 184 (300)
T ss_dssp ESCCSB
T ss_pred cCCccC
Confidence 988765
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=72.65 Aligned_cols=112 Identities=18% Similarity=0.143 Sum_probs=75.6
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEE-ecCCCCcCCCCCcccCCChHHHhhcHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFA-ADLLGHGRSDGIRCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 119 (323)
.+.++++.+. ..+..||.+||... +.+.+.+.++.+.. .|.++. .....+....+..+.+++...++
T Consensus 62 ~~~~~v~~~~--~~~~iVva~RGT~~--------~~d~l~d~~~~~~~~~~~~~~--~~vh~Gf~~~~~~~~~~~~~~~~ 129 (269)
T 1tib_A 62 DVTGFLALDN--TNKLIVLSFRGSRS--------IENWIGNLNFDLKEINDICSG--CRGHDGFTSSWRSVADTLRQKVE 129 (269)
T ss_dssp TEEEEEEEET--TTTEEEEEECCCSC--------THHHHTCCCCCEEECTTTSTT--CEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEC--CCCEEEEEEeCCCC--------HHHHHHhcCeeeeecCCCCCC--CEecHHHHHHHHHHHHHHHHHHH
Confidence 5666666543 44789999999863 23456666787776 565542 11122222345677788999999
Q ss_pred HHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC--ceeEEEEccCcc
Q 020633 120 HVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLF 166 (323)
Q Consensus 120 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~ 166 (323)
.+..+++ ..++++.||||||.+|..++...... .+..+.+.+|..
T Consensus 130 ~~~~~~~--~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 130 DAVREHP--DYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHCT--TSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred HHHHHCC--CceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 8887765 56899999999999999998875421 266666666654
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.48 E-value=2.3e-07 Score=79.15 Aligned_cols=124 Identities=15% Similarity=0.025 Sum_probs=74.7
Q ss_pred cCCCcEEEEEecCCC----CCcceEEEEecCCCCCcccc--------HHHHHHHHhh-CCcEEEEecCC----CCcCCCC
Q 020633 37 TPNGKLFTQSFLPLD----QKVKATVYMTHGYGSDTGWM--------FQKICISFAT-WGYAVFAADLL----GHGRSDG 99 (323)
Q Consensus 37 ~~~g~l~~~~~~~~~----~~~~~~vv~~HG~~~~~~~~--------~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~ 99 (323)
..|. |...+|.|.. .++.|+||++||++...... +......|+. .|+.|+++++| |+..+..
T Consensus 77 sedc-l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~ 155 (579)
T 2bce_A 77 NEDC-LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD 155 (579)
T ss_dssp CSCC-CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS
T ss_pred CCCC-CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCC
Confidence 3444 4445555532 24579999999987322100 0001234443 37999999999 4433321
Q ss_pred CcccCCChHHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCc
Q 020633 100 IRCYLGDMEKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~ 165 (323)
. .. .-..-..|...++++++.. .+.|..+|.|+|+|.||.++..++.. .... ++++|+.++.
T Consensus 156 ~-~~--pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~l-f~~ai~~Sg~ 222 (579)
T 2bce_A 156 S-NL--PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGL-IKRAISQSGV 222 (579)
T ss_dssp T-TC--CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTT-CSEEEEESCC
T ss_pred C-CC--CCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhH-HHHHHHhcCC
Confidence 1 11 1112246777777777653 33456799999999999998877654 3445 8899887764
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.47 E-value=4.1e-06 Score=69.69 Aligned_cols=126 Identities=16% Similarity=0.104 Sum_probs=85.9
Q ss_pred C-cEEEEEecCC---CCCcceEEEEecCCCCCccccHHHHHH-----------------HHhhCCcEEEEecC-CCCcCC
Q 020633 40 G-KLFTQSFLPL---DQKVKATVYMTHGYGSDTGWMFQKICI-----------------SFATWGYAVFAADL-LGHGRS 97 (323)
Q Consensus 40 g-~l~~~~~~~~---~~~~~~~vv~~HG~~~~~~~~~~~~~~-----------------~l~~~g~~v~~~d~-~G~G~s 97 (323)
+ .++|+.+... +...+|++|+++|+++.++ .+..+.+ .+.+. ..++.+|. .|.|.|
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sw~~~-~n~lfiDqPvGtGfS 125 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISK-GDLLFIDQPTGTGFS 125 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGT-SEEEEECCSTTSTTC
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHh-hhhhHhhcCCeEecCCCceeecccchhhc-CCeEEEecCCCcccc
Confidence 6 8999988754 2356899999999998876 5432221 11222 68999997 699998
Q ss_pred CCCcc---------cCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc-----------CCCce
Q 020633 98 DGIRC---------YLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS-----------EPNTW 156 (323)
Q Consensus 98 ~~~~~---------~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~-----------p~~~v 156 (323)
..... ...+.++.++|+..+++..-...+ ....+++|.|+|+||..+..+|... +..++
T Consensus 126 y~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inL 205 (483)
T 1ac5_A 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred CCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccce
Confidence 64321 223567778888888776654433 1245899999999999887776431 22348
Q ss_pred eEEEEccCccc
Q 020633 157 TGLIFSAPLFV 167 (323)
Q Consensus 157 ~~~vl~~~~~~ 167 (323)
+++++.++..+
T Consensus 206 kGi~IGNg~~d 216 (483)
T 1ac5_A 206 KALLIGNGWID 216 (483)
T ss_dssp EEEEEEEECCC
T ss_pred eeeEecCCccc
Confidence 99988877654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=6e-06 Score=67.16 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=91.4
Q ss_pred cceeEEEcC-CC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHH-----------------HHhhCCcEEEEe
Q 020633 30 NGKKYFETP-NG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICI-----------------SFATWGYAVFAA 89 (323)
Q Consensus 30 ~~~~~~~~~-~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~-----------------~l~~~g~~v~~~ 89 (323)
...-++... .+ .++|+.+...+ +..+|++|+++|+++.++ .+-.+.+ .+.+. ..++.+
T Consensus 16 ~ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sW~~~-an~lfi 93 (421)
T 1cpy_A 16 QYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFALGPSSIGPDLKPIGNPYSWNSN-ATVIFL 93 (421)
T ss_dssp CCEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHTTTTSSEEEETTTEEEECTTCGGGG-SEEECC
T ss_pred eeEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHh-HHHHHHccCCcEECCCCceeECCcccccc-cCEEEe
Confidence 344566555 46 89998887653 356899999999998766 4422110 11222 578899
Q ss_pred cC-CCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCC-CCC--CCeEEEEechhHHHHHHHhhhcC-----CCceeEEE
Q 020633 90 DL-LGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEP-YRD--LPGFLFGESMGGAATMLMYFQSE-----PNTWTGLI 160 (323)
Q Consensus 90 d~-~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~~~v~~~v 160 (323)
|. .|.|.|........+.+..++|+..+++..-.+.+ ... .+++|.|.|+||..+-.+|..-- ..+++++.
T Consensus 94 DqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~ 173 (421)
T 1cpy_A 94 DQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVL 173 (421)
T ss_dssp CCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEE
T ss_pred cCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEE
Confidence 95 58898864433234567778888888877665443 223 68999999999998877775421 23489998
Q ss_pred EccCccc
Q 020633 161 FSAPLFV 167 (323)
Q Consensus 161 l~~~~~~ 167 (323)
+.++..+
T Consensus 174 IGNg~~d 180 (421)
T 1cpy_A 174 IGNGLTD 180 (421)
T ss_dssp EESCCCC
T ss_pred ecCcccC
Confidence 8777654
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.28 E-value=2.2e-05 Score=59.36 Aligned_cols=128 Identities=19% Similarity=0.108 Sum_probs=82.6
Q ss_pred CCC-cEEEEEecC-CC-CCcceEEEEecCCCCCccccH-HHHHH-----------H-------HhhCCcEEEEecC-CCC
Q 020633 38 PNG-KLFTQSFLP-LD-QKVKATVYMTHGYGSDTGWMF-QKICI-----------S-------FATWGYAVFAADL-LGH 94 (323)
Q Consensus 38 ~~g-~l~~~~~~~-~~-~~~~~~vv~~HG~~~~~~~~~-~~~~~-----------~-------l~~~g~~v~~~d~-~G~ 94 (323)
..+ .++|+.+.. .. ...+|+||+++|+++.++ .+ -.+.+ . +.+. ..++.+|. .|.
T Consensus 34 ~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~-anllfiDqPvGt 111 (270)
T 1gxs_A 34 NNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSS-IGLGAMQELGAFRVHTNGESLLLNEYAWNKA-ANILFAESPAGV 111 (270)
T ss_dssp TTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCT-TTTHHHHTTSSEEECTTSSCEEECTTCGGGT-SEEEEECCSTTS
T ss_pred CCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccc-hhhhhHHhccCceecCCCCcceeCccchhcc-ccEEEEeccccc
Confidence 346 899998877 32 356899999999998877 43 43321 0 1122 68999995 599
Q ss_pred cCCCCCc--ccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh---c---CCCceeEEEEccCc
Q 020633 95 GRSDGIR--CYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ---S---EPNTWTGLIFSAPL 165 (323)
Q Consensus 95 G~s~~~~--~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~---~---p~~~v~~~vl~~~~ 165 (323)
|.|.... ....+-+..++|+..+++..-.+.+ ....+++|.|.| |-++...+... . +..+++++++.++.
T Consensus 112 GfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~ 190 (270)
T 1gxs_A 112 GFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGL 190 (270)
T ss_dssp TTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCC
T ss_pred cccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCc
Confidence 9885332 2223456677888887776655432 235589999999 65544332221 1 12348999999988
Q ss_pred ccC
Q 020633 166 FVI 168 (323)
Q Consensus 166 ~~~ 168 (323)
.+.
T Consensus 191 ~d~ 193 (270)
T 1gxs_A 191 TND 193 (270)
T ss_dssp CBH
T ss_pred cCh
Confidence 753
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.27 E-value=4.2e-06 Score=64.55 Aligned_cols=88 Identities=17% Similarity=0.083 Sum_probs=57.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
..+..||.+||.... .+.+.+.++.+...|....|.. ..+....+..+.+++...++.+..+++ ..++
T Consensus 72 ~~~~iVvafRGT~~~--------~d~~~d~~~~~~~~~~~~~~~v--h~Gf~~~~~~~~~~~~~~l~~~~~~~p--~~~i 139 (279)
T 1tia_A 72 TNSAVVLAFRGSYSV--------RNWVADATFVHTNPGLCDGCLA--ELGFWSSWKLVRDDIIKELKEVVAQNP--NYEL 139 (279)
T ss_pred CCCEEEEEEeCcCCH--------HHHHHhCCcEeecCCCCCCCcc--ChhHHHHHHHHHHHHHHHHHHHHHHCC--CCeE
Confidence 347899999998632 2334444565555454221111 122222455666778888888776654 5689
Q ss_pred EEEEechhHHHHHHHhhhcC
Q 020633 133 FLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p 152 (323)
++.|||+||.+|..++....
T Consensus 140 ~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 140 VVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred EEEecCHHHHHHHHHHHHHH
Confidence 99999999999999888754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-07 Score=91.47 Aligned_cols=95 Identities=14% Similarity=0.245 Sum_probs=0.0
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.+++++++|+.++... .|..+...|. ..|+.+.++|. . ...++++++++..+.++.+.. ..++.
T Consensus 2241 ~~~~Lfc~~~agG~~~-~y~~l~~~l~---~~v~~lq~pg~------~-~~~~i~~la~~~~~~i~~~~p-----~gpy~ 2304 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSIT-VFHGLAAKLS---IPTYGLQCTGA------A-PLDSIQSLASYYIECIRQVQP-----EGPYR 2304 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHH-HHHHHHHhhC---CcEEEEecCCC------C-CCCCHHHHHHHHHHHHHHhCC-----CCCEE
Confidence 3578999999987765 7888887773 67888888871 1 123677777777766665542 23799
Q ss_pred EEEechhHHHHHHHhhhcCCC--cee---EEEEccC
Q 020633 134 LFGESMGGAATMLMYFQSEPN--TWT---GLIFSAP 164 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~p~~--~v~---~~vl~~~ 164 (323)
++|||+||.+|..+|.+.... .+. .++++++
T Consensus 2305 L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2305 IAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ------------------------------------
T ss_pred EEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 999999999999988763321 143 5666664
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=98.14 E-value=2.2e-05 Score=60.27 Aligned_cols=66 Identities=14% Similarity=0.156 Sum_probs=44.2
Q ss_pred cEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 84 YAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 84 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
..+...++||.....-..+....+..+.+++...++.+..+++ ..++++.||||||.+|..++...
T Consensus 92 ~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p--~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 92 LTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYP--SYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred CceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCC--CceEEEEeeCHHHHHHHHHHHHH
Confidence 6677777887422111122222456667777777777665543 55799999999999999888765
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=98.05 E-value=2.9e-05 Score=59.57 Aligned_cols=86 Identities=16% Similarity=0.181 Sum_probs=52.2
Q ss_pred cceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE
Q 020633 54 VKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF 133 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 133 (323)
.+..||.++|...... .+.+..+ ...++++........+....+..+.+++...++.+..+++ ..+++
T Consensus 73 ~~~ivvafRGT~~~~d--------~~~d~~~--~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~--~~~i~ 140 (269)
T 1lgy_A 73 QKTIYLVFRGTNSFRS--------AITDIVF--NFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHP--TYKVI 140 (269)
T ss_dssp TTEEEEEEECCSCCHH--------HHHTCCC--CEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCT--TCEEE
T ss_pred CCEEEEEEeCCCcHHH--------HHhhcCc--ccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCC--CCeEE
Confidence 3679999999843222 1222112 2334443211100111222455666788888888777665 56899
Q ss_pred EEEechhHHHHHHHhhhc
Q 020633 134 LFGESMGGAATMLMYFQS 151 (323)
Q Consensus 134 l~G~S~Gg~~a~~~a~~~ 151 (323)
+.|||+||.+|..++...
T Consensus 141 vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 141 VTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp EEEETHHHHHHHHHHHHH
T ss_pred EeccChHHHHHHHHHHHH
Confidence 999999999999888765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00022 Score=53.46 Aligned_cols=105 Identities=15% Similarity=0.074 Sum_probs=69.1
Q ss_pred cceEEEEecCCCCC--cc-ccHHHHHHHHhhCCcEEEEe-cCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 54 VKATVYMTHGYGSD--TG-WMFQKICISFATWGYAVFAA-DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~HG~~~~--~~-~~~~~~~~~l~~~g~~v~~~-d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
++|+||+.+|.+.. .. .....+++.|..+ +.+-.+ +||-... .+..+..+-+.++...++....+.+ .
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA~~~-----~y~~S~~~G~~~~~~~i~~~~~~CP--~ 73 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPAAAF-----PMWPSVEKGVAELILQIELKLDADP--Y 73 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCCCSS-----SCHHHHHHHHHHHHHHHHHHHHHCT--T
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccCccc-----CccchHHHHHHHHHHHHHHHHhhCC--C
Confidence 47999999999763 11 1345667766544 555444 3553221 1111445566777788877777776 7
Q ss_pred CCeEEEEechhHHHHHHHhhhc-----------CCCceeEEEEccCccc
Q 020633 130 LPGFLFGESMGGAATMLMYFQS-----------EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~-----------p~~~v~~~vl~~~~~~ 167 (323)
.+++|.|+|.|+.++-.++... .++ |.++++++-+..
T Consensus 74 tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~-V~avvlfGdP~r 121 (254)
T 3hc7_A 74 ADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHR-LKKVIFWGNPMR 121 (254)
T ss_dssp CCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGG-EEEEEEESCTTC
T ss_pred CeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhh-EEEEEEEeCCCC
Confidence 7999999999999998776541 234 889998875443
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00095 Score=50.60 Aligned_cols=56 Identities=20% Similarity=0.158 Sum_probs=37.5
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh----cCCCceeEEEEccC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ----SEPNTWTGLIFSAP 164 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~vl~~~ 164 (323)
+....+++...++.+..+++ ..++++.|||+||.+|..++.. .|...+.....-+|
T Consensus 103 ~~~~~~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~P 162 (258)
T 3g7n_A 103 WSAVHDTIITEVKALIAKYP--DYTLEAVGHSLGGALTSIAHVALAQNFPDKSLVSNALNAF 162 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHST--TCEEEEEEETHHHHHHHHHHHHHHHHCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCeEEEeccCHHHHHHHHHHHHHHHhCCCCceeEEEecCC
Confidence 34445566666777766655 5689999999999999887765 44432554444444
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00037 Score=53.11 Aligned_cols=56 Identities=21% Similarity=0.189 Sum_probs=38.8
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAP 164 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~ 164 (323)
+....+++...++.+..+++ ..++++.|||+||.+|..++... +..++..+..-+|
T Consensus 104 ~~~~~~~~~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~~~tFg~P 161 (261)
T 1uwc_A 104 WISVQDQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHTTCSSEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHCC--CceEEEEecCHHHHHHHHHHHHHhccCCCeEEEEecCC
Confidence 44455677777887777665 56899999999999999888763 2222764444444
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0036 Score=44.84 Aligned_cols=86 Identities=13% Similarity=0.073 Sum_probs=58.7
Q ss_pred HHHHHhhCCcEEEEe--cCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC
Q 020633 75 ICISFATWGYAVFAA--DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152 (323)
Q Consensus 75 ~~~~l~~~g~~v~~~--d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 152 (323)
+...+......|..+ +||-.-... .....+..+-+.++...|+....+.+ ..+++|+|+|.|+.++-.++...|
T Consensus 44 L~~~~g~~~v~v~~V~~~YpA~~~~~--~~~~~S~~~G~~~~~~~i~~~~~~CP--~tkiVL~GYSQGA~V~~~~~~~l~ 119 (197)
T 3qpa_A 44 LESAFGKDGVWIQGVGGAYRATLGDN--ALPRGTSSAAIREMLGLFQQANTKCP--DATLIAGGYXQGAALAAASIEDLD 119 (197)
T ss_dssp HHHHHCTTTEEEEECCTTCCCCGGGG--GSTTSSCHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHHSC
T ss_pred HHHhcCCCceEEEeeCCCCcCCCCcc--cCccccHHHHHHHHHHHHHHHHHhCC--CCcEEEEecccccHHHHHHHhcCC
Confidence 333443234677888 787432110 00112456667888888888888876 779999999999999988776655
Q ss_pred ----CCceeEEEEccCc
Q 020633 153 ----PNTWTGLIFSAPL 165 (323)
Q Consensus 153 ----~~~v~~~vl~~~~ 165 (323)
++ |.++++++-+
T Consensus 120 ~~~~~~-V~avvlfGdP 135 (197)
T 3qpa_A 120 SAIRDK-IAGTVLFGYT 135 (197)
T ss_dssp HHHHTT-EEEEEEESCT
T ss_pred HhHHhh-eEEEEEeeCC
Confidence 45 9999998754
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00018 Score=49.79 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=51.1
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCC----------------------CCccEEEecCCCcccccCCCchhHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS----------------------ADKSIKIYDGMYHSLIQGEPDENANLVLK 305 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 305 (323)
.+++|+.+|+.|.+++.-..+.+.+.+.- .+.++..+.++||+...++|+. ..+
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~----a~~ 139 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQ----ALV 139 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHH----HHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHH----HHH
Confidence 68999999999999999988888887731 2578889999999998666654 778
Q ss_pred HHHHHHHH
Q 020633 306 DMREWIDE 313 (323)
Q Consensus 306 ~i~~fl~~ 313 (323)
.+..||..
T Consensus 140 m~~~fl~~ 147 (153)
T 1whs_B 140 LFQYFLQG 147 (153)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHCC
Confidence 88888864
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0011 Score=51.81 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=38.6
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCc
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPL 165 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~ 165 (323)
+....+++...++.+..+++ ..++++.|||+||.+|..++... ....+..+..-+|.
T Consensus 115 ~~~i~~~l~~~l~~~~~~~p--~~~i~vtGHSLGGAlA~L~a~~l~~~~~~v~~~TFG~Pr 173 (319)
T 3ngm_A 115 WNEISAAATAAVAKARKANP--SFKVVSVGHSLGGAVATLAGANLRIGGTPLDIYTYGSPR 173 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSST--TCEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhhCC--CCceEEeecCHHHHHHHHHHHHHHhcCCCceeeecCCCC
Confidence 44555677777777776655 66899999999999998877652 12225555444443
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0029 Score=46.11 Aligned_cols=107 Identities=17% Similarity=0.136 Sum_probs=66.0
Q ss_pred eEEEEecCCCCCc--cccHHHHHHHHhhC--CcEEEEecCCCC-cCCC-CCcccCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 56 ATVYMTHGYGSDT--GWMFQKICISFATW--GYAVFAADLLGH-GRSD-GIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 56 ~~vv~~HG~~~~~--~~~~~~~~~~l~~~--g~~v~~~d~~G~-G~s~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
-.||+..|.+... . ....+.+.|.++ |-.+..++||-. |.+. ....+..+..+-+.++...|+....+.+ .
T Consensus 5 v~vi~aRGT~E~~g~G-~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP--~ 81 (207)
T 1g66_A 5 IHVFGARETTASPGYG-SSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCP--S 81 (207)
T ss_dssp EEEEEECCTTCCSSCG-GGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHST--T
T ss_pred EEEEEEeCCCCCCCCC-cccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCC--C
Confidence 4567777765432 1 122455555443 457888898854 2211 0111111345556788888888877776 7
Q ss_pred CCeEEEEechhHHHHHHHhhh--------------cC----CCceeEEEEccCcc
Q 020633 130 LPGFLFGESMGGAATMLMYFQ--------------SE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~--------------~p----~~~v~~~vl~~~~~ 166 (323)
.+++|.|+|.|+.++-.++.. .| ++ |.++++++-+.
T Consensus 82 tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-V~avvlfGdP~ 135 (207)
T 1g66_A 82 TKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNM-VKAAIFMGDPM 135 (207)
T ss_dssp CEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHH-EEEEEEESCTT
T ss_pred CcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhcc-EEEEEEEcCCC
Confidence 799999999999999877631 12 23 88888887543
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0012 Score=50.69 Aligned_cols=42 Identities=14% Similarity=0.250 Sum_probs=30.6
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+....+++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 117 ~~~~~~~~~~~l~~~~~~~p--~~~l~vtGHSLGGalA~l~a~~ 158 (279)
T 3uue_A 117 YNDLMDDIFTAVKKYKKEKN--EKRVTVIGHSLGAAMGLLCAMD 158 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--CCCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEcccCHHHHHHHHHHHH
Confidence 34445566666666655544 5689999999999999987764
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.004 Score=48.06 Aligned_cols=89 Identities=13% Similarity=0.062 Sum_probs=57.2
Q ss_pred HHHHHhhCCcEEEEecCCCCcCC----CCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 75 ICISFATWGYAVFAADLLGHGRS----DGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 75 ~~~~l~~~g~~v~~~d~~G~G~s----~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+...+......++.++|+-.-.. .+...+..+..+=+.++...|+....+.+ ..+++|+|+|.|+.++-.++..
T Consensus 76 L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP--~TkiVL~GYSQGA~V~~~~~~~ 153 (302)
T 3aja_A 76 LAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCP--LTSYVIAGFSQGAVIAGDIASD 153 (302)
T ss_dssp HHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCC--CCcEEEEeeCchHHHHHHHHHh
Confidence 33334333466788888854211 00111112445556778888888777776 7799999999999998877643
Q ss_pred --------cCCCceeEEEEccCcc
Q 020633 151 --------SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 151 --------~p~~~v~~~vl~~~~~ 166 (323)
.+++ |.++++++-..
T Consensus 154 i~~g~~~~~~~~-V~aVvLfGdP~ 176 (302)
T 3aja_A 154 IGNGRGPVDEDL-VLGVTLIADGR 176 (302)
T ss_dssp HHTTCSSSCGGG-EEEEEEESCTT
T ss_pred ccCCCCCCChHH-EEEEEEEeCCC
Confidence 1234 99999987543
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0091 Score=43.33 Aligned_cols=100 Identities=18% Similarity=0.137 Sum_probs=65.9
Q ss_pred eEEEEecCCCCCc--cccHHHHHHH-HhhC-CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 56 ATVYMTHGYGSDT--GWMFQKICIS-FATW-GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 56 ~~vv~~HG~~~~~--~~~~~~~~~~-l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
-.||+..|.+... ......+... |... |-....++||-.- .+. + .+-+.++...|+....+.+ ..+
T Consensus 9 v~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~------~y~-S-~~G~~~~~~~i~~~~~~CP--~tk 78 (205)
T 2czq_A 9 YVLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADF------SQN-S-AAGTADIIRRINSGLAANP--NVC 78 (205)
T ss_dssp EEEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCT------TCC-C-HHHHHHHHHHHHHHHHHCT--TCE
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccC------CCc-C-HHHHHHHHHHHHHHHhhCC--CCc
Confidence 4566666665432 1124456666 5443 3355777777321 122 4 6677888888888887776 779
Q ss_pred eEEEEechhHHHHHHHhhhc--CC---CceeEEEEccCc
Q 020633 132 GFLFGESMGGAATMLMYFQS--EP---NTWTGLIFSAPL 165 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~--p~---~~v~~~vl~~~~ 165 (323)
++|+|+|.|+.++-.++... +. .+|.++++++-+
T Consensus 79 ivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 79 YILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred EEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 99999999999988776544 32 138999998744
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0086 Score=43.07 Aligned_cols=78 Identities=14% Similarity=-0.006 Sum_probs=54.6
Q ss_pred CcEEEEe--cCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----CCce
Q 020633 83 GYAVFAA--DLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----PNTW 156 (323)
Q Consensus 83 g~~v~~~--d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v 156 (323)
...|..+ +||-.-... .....+..+-+.++...|+....+.+ ..+++|+|+|.|+.++-.++...| ++ |
T Consensus 60 ~v~v~~V~~~YpA~~~~~--~~~~~S~~~G~~~~~~~i~~~~~~CP--~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~-V 134 (201)
T 3dcn_A 60 DVWVQGVGGPYLADLASN--FLPDGTSSAAINEARRLFTLANTKCP--NAAIVSGGYSQGTAVMAGSISGLSTTIKNQ-I 134 (201)
T ss_dssp GEEEEECCTTCCCCSGGG--GSTTSSCHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHTTSCHHHHHH-E
T ss_pred ceEEEEeCCCccccCCcc--cccCCCHHHHHHHHHHHHHHHHHhCC--CCcEEEEeecchhHHHHHHHhcCChhhhhh-e
Confidence 3678888 677431110 00012456667888888888888876 779999999999999988776544 34 8
Q ss_pred eEEEEccCc
Q 020633 157 TGLIFSAPL 165 (323)
Q Consensus 157 ~~~vl~~~~ 165 (323)
.++++++-+
T Consensus 135 ~avvlfGdP 143 (201)
T 3dcn_A 135 KGVVLFGYT 143 (201)
T ss_dssp EEEEEETCT
T ss_pred EEEEEeeCc
Confidence 899988744
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0068 Score=44.18 Aligned_cols=108 Identities=15% Similarity=0.058 Sum_probs=66.1
Q ss_pred eEEEEecCCCCCcc-ccHHHHHHHHhhC--CcEEEEecCCCCc-CCC-CCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 56 ATVYMTHGYGSDTG-WMFQKICISFATW--GYAVFAADLLGHG-RSD-GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 56 ~~vv~~HG~~~~~~-~~~~~~~~~l~~~--g~~v~~~d~~G~G-~s~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
-.||+..|.+.... -....+.+.|.++ |-.+..++||-.. .+. ....+..+..+=+.++...|+....+.+ ..
T Consensus 5 v~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP--~t 82 (207)
T 1qoz_A 5 IHVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCP--DT 82 (207)
T ss_dssp EEEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCT--TS
T ss_pred eEEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCC--CC
Confidence 45677777654321 0123455555443 4478888888642 211 0111111344556778888888777776 77
Q ss_pred CeEEEEechhHHHHHHHhhh--------------cC----CCceeEEEEccCcc
Q 020633 131 PGFLFGESMGGAATMLMYFQ--------------SE----PNTWTGLIFSAPLF 166 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~--------------~p----~~~v~~~vl~~~~~ 166 (323)
+++|.|+|.|+.++-.++.. .| ++ |.++++++-+.
T Consensus 83 kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-V~avvlfGdP~ 135 (207)
T 1qoz_A 83 QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSA-VKAAIFMGDPR 135 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHH-EEEEEEESCTT
T ss_pred cEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhcc-EEEEEEEcCCc
Confidence 99999999999999877641 11 23 88888887543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.012 Score=41.78 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=52.5
Q ss_pred CcEEEEec--CCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----CCce
Q 020633 83 GYAVFAAD--LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE----PNTW 156 (323)
Q Consensus 83 g~~v~~~d--~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~~v 156 (323)
...|..++ ||-.-...... ..+...-++++..+++....+.+ ..+++|+|+|.|+.++-.++...| ++ |
T Consensus 48 ~v~v~~V~~~YpA~~~~~~~~--~~s~~~g~~~~~~~i~~~~~~CP--~tkivl~GYSQGA~V~~~~~~~l~~~~~~~-V 122 (187)
T 3qpd_A 48 DVACQGVGPRYTADLPSNALP--EGTSQAAIAEAQGLFEQAVSKCP--DTQIVAGGYSQGTAVMNGAIKRLSADVQDK-I 122 (187)
T ss_dssp CEEEEECCSSCCCCGGGGGST--TSSCHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHTTSCHHHHHH-E
T ss_pred CceEEeeCCcccCcCcccccc--ccchhHHHHHHHHHHHHHHHhCC--CCcEEEEeeccccHHHHhhhhcCCHhhhhh-E
Confidence 46788888 77432100000 01234456777778877777766 779999999999999988776554 34 8
Q ss_pred eEEEEccCc
Q 020633 157 TGLIFSAPL 165 (323)
Q Consensus 157 ~~~vl~~~~ 165 (323)
.++++++-+
T Consensus 123 ~avvlfGdP 131 (187)
T 3qpd_A 123 KGVVLFGYT 131 (187)
T ss_dssp EEEEEESCT
T ss_pred EEEEEeeCC
Confidence 999998744
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0015 Score=50.84 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=30.1
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
....+++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 134 ~~~~~~i~~~l~~~~~~~p--~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 134 NNTYNQIGPKLDSVIEQYP--DYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHHHH
Confidence 3344555666666655554 5689999999999999988775
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0035 Score=43.43 Aligned_cols=63 Identities=10% Similarity=0.147 Sum_probs=49.2
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCC---------------------------CCccEEEecCCCcccccCCCchh
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASS---------------------------ADKSIKIYDGMYHSLIQGEPDEN 299 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~~~~~~~~ 299 (323)
-.+++|+.+|+.|.+++.-..+.+.+.+.- .+.+++.+.++||+...++|+.
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~- 140 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLA- 140 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHH-
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHH-
Confidence 368999999999999998888888777631 2345677889999999766665
Q ss_pred HHHHHHHHHHHHHH
Q 020633 300 ANLVLKDMREWIDE 313 (323)
Q Consensus 300 ~~~~~~~i~~fl~~ 313 (323)
..+.+.+||..
T Consensus 141 ---al~m~~~fl~g 151 (155)
T 4az3_B 141 ---AFTMFSRFLNK 151 (155)
T ss_dssp ---HHHHHHHHHTT
T ss_pred ---HHHHHHHHHcC
Confidence 77788888853
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.015 Score=40.33 Aligned_cols=62 Identities=11% Similarity=0.128 Sum_probs=48.3
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCC-------------------------CCccEEEecCCCcccccCCCchhHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS-------------------------ADKSIKIYDGMYHSLIQGEPDENANL 302 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~ 302 (323)
.+++|+.+|+.|.+++.-..+.+.+.+.- .+.++..+.++||+....+|+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~---- 141 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQ---- 141 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHH----
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHH----
Confidence 68999999999999998888887776531 1245678899999998666654
Q ss_pred HHHHHHHHHHH
Q 020633 303 VLKDMREWIDE 313 (323)
Q Consensus 303 ~~~~i~~fl~~ 313 (323)
..+.+..||..
T Consensus 142 al~m~~~fl~g 152 (158)
T 1gxs_B 142 AFLLFKQFLKG 152 (158)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 77788888864
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.011 Score=47.00 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=25.8
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
..+.+.++....+.+ ..++++.|||+||.+|..++..
T Consensus 150 ~~l~~~l~~~~~~~~--~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 150 KTILQFLNEKIGPEG--KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CCHHHHHHHHHCTTC--CEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccC--CceEEEecCChHHHHHHHHHHH
Confidence 345555555543222 4589999999999999888765
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.96 E-value=0.01 Score=47.89 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=25.7
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 151 (323)
+.+...|+.+..+++....++++.|||+||.+|..++...
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3344444444444321124799999999999999887653
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=93.57 E-value=0.048 Score=45.55 Aligned_cols=63 Identities=5% Similarity=-0.050 Sum_probs=49.0
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcC---------C--------------------------CCccEEEecCCCcccc
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKAS---------S--------------------------ADKSIKIYDGMYHSLI 292 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------~--------------------------~~~~~~~~~~~gH~~~ 292 (323)
.++||+.+|+.|.+++.-..+.+.+.+. . .+.+++.+.++||+..
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 5899999999999999888887776653 0 1245677899999998
Q ss_pred cCCCchhHHHHHHHHHHHHHHH
Q 020633 293 QGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
..+|+. ..+.+..||.+.
T Consensus 452 ~dqP~~----al~m~~~fl~~~ 469 (483)
T 1ac5_A 452 FDKSLV----SRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHH----HHHHHHHHTTCC
T ss_pred chhHHH----HHHHHHHHHCCc
Confidence 666654 788888888654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=93.16 E-value=0.12 Score=42.14 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=48.0
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCC-----------------------------CCccEEEecCCCcccccCCCch
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS-----------------------------ADKSIKIYDGMYHSLIQGEPDE 298 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~gH~~~~~~~~~ 298 (323)
.++||+.+|+.|.+++.-..+.+.+.+.- .+.+++.+.++||+....+|+.
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 58999999999999998877777665521 1245677889999998666654
Q ss_pred hHHHHHHHHHHHHHHH
Q 020633 299 NANLVLKDMREWIDER 314 (323)
Q Consensus 299 ~~~~~~~~i~~fl~~~ 314 (323)
..+.+.+||...
T Consensus 407 ----al~m~~~fl~g~ 418 (421)
T 1cpy_A 407 ----ALSMVNEWIHGG 418 (421)
T ss_dssp ----HHHHHHHHHTTT
T ss_pred ----HHHHHHHHhcCc
Confidence 778888888643
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.85 E-value=0.17 Score=41.82 Aligned_cols=61 Identities=10% Similarity=0.153 Sum_probs=47.6
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCC---------------------------CCccEEEecCCCcccccCCCchhH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASS---------------------------ADKSIKIYDGMYHSLIQGEPDENA 300 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~gH~~~~~~~~~~~ 300 (323)
.++||+.+|+.|.+++.-..+.+.+.+.- .+.+++.+.++||+....+|+.
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~-- 438 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLA-- 438 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHH--
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHH--
Confidence 57999999999999999888888777631 1245667899999998666654
Q ss_pred HHHHHHHHHHHH
Q 020633 301 NLVLKDMREWID 312 (323)
Q Consensus 301 ~~~~~~i~~fl~ 312 (323)
..+.+..||.
T Consensus 439 --al~m~~~fl~ 448 (452)
T 1ivy_A 439 --AFTMFSRFLN 448 (452)
T ss_dssp --HHHHHHHHHT
T ss_pred --HHHHHHHHhc
Confidence 7777888875
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=81.58 E-value=2.2 Score=35.58 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=41.1
Q ss_pred cCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCC-----Cc---hhHHHHHHHHHHHHHHHHh
Q 020633 249 VPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE-----PD---ENANLVLKDMREWIDERVE 316 (323)
Q Consensus 249 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-----~~---~~~~~~~~~i~~fl~~~~~ 316 (323)
.-+++++|+.|+.......+ .. ++....++++|+.|..-+.. |+ +.++.+.+.|.+||++.-+
T Consensus 382 sniiF~nG~~DPW~~~gv~~----~~-s~~~~~~~I~g~~Hc~Dl~~~~~~Dp~~l~~ar~~~~~~i~~Wl~~~~~ 452 (472)
T 4ebb_A 382 SNIIFSNGNLDPWAGGGIRR----NL-SASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWVKAARR 452 (472)
T ss_dssp CSEEEEEETTCTTGGGSCCS----CC-SSSEEEEEETTCCTTGGGSCCCTTCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CeEEEECCCcCCCcCccCCC----CC-CCCceEEEeCcCeeeccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999985433211 11 24556788999999876532 22 2456677778888876543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 323 | ||||
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 6e-17 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 3e-12 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 6e-11 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 9e-11 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 3e-09 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 4e-09 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 5e-09 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 1e-08 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 2e-08 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 2e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 3e-07 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 4e-07 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 5e-07 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 7e-07 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 8e-07 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 8e-07 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 9e-07 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 1e-06 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 1e-06 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 2e-06 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 7e-06 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 5e-05 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 9e-05 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 1e-04 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 4e-04 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 5e-04 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 6e-04 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 6e-04 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 77.7 bits (190), Expect = 6e-17
Identities = 31/289 (10%), Positives = 71/289 (24%), Gaps = 36/289 (12%)
Query: 34 YFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAAD 90
NG +L P + T+ + G+ + +T G+ VF D
Sbjct: 8 VLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF-AGLAEYLSTNGFHVFRYD 66
Query: 91 LLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150
L H M S + + ++ L S+ +
Sbjct: 67 SLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNI---GLIAASLSARVAYEV--- 120
Query: 151 SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210
+ LI + + + + ++ + ++ + L + ++D +
Sbjct: 121 ISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFE 180
Query: 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
+ D + +VP + D +
Sbjct: 181 HHWDTLD---------------------STLDKVANTSVPLIAFTANNDDWVKQEEVYDM 219
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERYG 319
+ + G H L EN ++ + + G
Sbjct: 220 LAHIRTGHCKLYSLLGSSHDLG-----ENLVVLRNFYQSVTKAAIAMDG 263
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 64.6 bits (156), Expect = 3e-12
Identities = 34/274 (12%), Positives = 63/274 (22%), Gaps = 48/274 (17%)
Query: 47 FLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106
+P V M G S T ++ G A D G G + GD
Sbjct: 123 RIPEGPGPHPAVIMLGGLES-TKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGD 181
Query: 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166
EK ++ + + G L G A + I
Sbjct: 182 YEKYTSAVVDLLTKLEAIRNDA--IGVLGRSLGGNYALKSAACEPR---LAACISWGGFS 236
Query: 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPR 226
+ + L + + + A
Sbjct: 237 DLDYWDLETPLTKESWKYVSKVDTLEEA-------------------------------- 264
Query: 227 VGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286
R +D S++ P +HG D V + + E + ++ +
Sbjct: 265 ----RLHVHAALETRDVLSQIACPTYILHGVHDEVP-LSFVDTVLELVPAEHLNLVVEKD 319
Query: 287 MYHSLIQGEPDENANLVLKDMREWIDERVERYGP 320
H +M +W+ + +
Sbjct: 320 GDHCCH-----NLGIRPRLEMADWLYDVLVAGKK 348
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 59.5 bits (142), Expect = 6e-11
Identities = 34/259 (13%), Positives = 84/259 (32%), Gaps = 30/259 (11%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
+ V + HG+ + + + GY A GHG + G +
Sbjct: 11 ERAVLLLHGFTG-NSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVM 69
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ + + G S+GG ++ + + P
Sbjct: 70 NGYEFL----KNKGYEKIAVAGLSLGGVFSLKLGY----------------------TVP 103
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ + M ++ ++ + + K K + + + T++ +
Sbjct: 104 IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQ 163
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
+ ++D+ + P V D + P S+ ++Y + S K IK Y+ H +
Sbjct: 164 ELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITL- 222
Query: 295 EPDENANLVLKDMREWIDE 313
D+ + + +D+ +++
Sbjct: 223 --DQEKDQLHEDIYAFLES 239
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 59.8 bits (143), Expect = 9e-11
Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 27/296 (9%)
Query: 19 EEEYYTSQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICI 77
+ Y + GV+ + +++ ++ +P + + HGY + ++ +
Sbjct: 45 QPVDYPADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEM-V 103
Query: 78 SFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGE 137
++A GYA F + G RS+ + S ++ D + +
Sbjct: 104 NWALHGYATFGMLVRGQQRSED-----------TSISPHGHALGWMTKGILDKDTYYYRG 152
Query: 138 SMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197
A L S I + + + + + + + +
Sbjct: 153 VYLDAVRALEVISSFDEVDETRIG---VTGGSQGGGLTIAAAALSDIPKAAVADYPYLSN 209
Query: 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257
+ + L++ ++ R G P I + +V VP L G
Sbjct: 210 FERAIDVALEQPYLEI--NSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGL 267
Query: 258 ADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313
D VT P++ Y K +K+Y H I E + +
Sbjct: 268 IDKVTPPSTVFAAYNHL-ETKKELKVYRYFGHEYIPAFQTE--------KLAFFKQ 314
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 54.8 bits (130), Expect = 3e-09
Identities = 34/258 (13%), Positives = 72/258 (27%), Gaps = 13/258 (5%)
Query: 57 TVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL 115
V + HG G + ++ I + Y V A D++G G +D Y + +
Sbjct: 25 PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHII 84
Query: 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
+ + G + GG + + ++ A +
Sbjct: 85 GIMDALEIE------KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLN 138
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
+ + + D +V + I + +
Sbjct: 139 AVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWID 198
Query: 236 VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295
++ + L +HG D V +SS L E A + ++ H +
Sbjct: 199 ALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQ--LHVFGRCGHWTQIEQ 256
Query: 296 PDENANLVLKDMREWIDE 313
D + + E+ +E
Sbjct: 257 TDR----FNRLVVEFFNE 270
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 54.5 bits (129), Expect = 4e-09
Identities = 38/294 (12%), Positives = 74/294 (25%), Gaps = 38/294 (12%)
Query: 40 GKLFTQSFLPLDQKVKATVYMTHGYGSDTGWM------FQKICISFATWGYAVFAADLLG 93
+++ + +P K + + + HG F GY+ + D G
Sbjct: 44 DQMYVRYQIPQRAK-RYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSG 102
Query: 94 HGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153
GRS + K+ + S + G P
Sbjct: 103 RGRSATDI-SAINAVKLGKAPASSLPDLF----AAGHEAAWAIFRFGPRYPDAFKDTQFP 157
Query: 154 NTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213
++ + +M + L+ + ++ + +
Sbjct: 158 VQAQAELWQQMVPDWLGSMP------TPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQT 211
Query: 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK 273
A NP+ T + C +D ++P L V G + +L
Sbjct: 212 AAMNPKGIT-----AIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACH 266
Query: 274 ASSA------------DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315
A G H ++Q D N V + +WI
Sbjct: 267 AFIDALNAAGGKGQLMSLPALGVHGNSHMMMQ---DRNNLQVADLILDWIGRNT 317
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 54.1 bits (128), Expect = 5e-09
Identities = 36/264 (13%), Positives = 67/264 (25%), Gaps = 20/264 (7%)
Query: 57 TVYMTHGYGSDTGWM--FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
TV M HG G G + + F GY V D G +SD + A +
Sbjct: 32 TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ + ++ A P+ LI P + P P
Sbjct: 92 KGLMDALDIDRAHLVGNAMGGATALNFALEY-------PDRIGKLILMGPGGLGPSMFAP 144
Query: 175 ---SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMR 231
+ L +T M + +++ E L+ +R + +
Sbjct: 145 MPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLIS 204
Query: 232 EIARVCQYIQ--DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYH 289
++ G D L A + ++ H
Sbjct: 205 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDAR--LHVFSKCGH 262
Query: 290 SLIQGEPDENANLVLKDMREWIDE 313
DE + + +++
Sbjct: 263 WAQWEHADE----FNRLVIDFLRH 282
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 53.0 bits (125), Expect = 1e-08
Identities = 27/252 (10%), Positives = 58/252 (23%), Gaps = 6/252 (2%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR---CYLGDMEKVAAS 113
+ HG GW + K+ G+ V A DL G L D
Sbjct: 4 HFVLVHGACHG-GWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLME 62
Query: 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK 173
+ G + +Y + FV+ + +
Sbjct: 63 LMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNE 122
Query: 174 PSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREI 233
+ ++ + K + + + R ++
Sbjct: 123 RTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFME 182
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
+ +V + + T D + + + G H +
Sbjct: 183 DLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTE--AIEIKGADHMAML 240
Query: 294 GEPDENANLVLK 305
EP + +L+
Sbjct: 241 CEPQKLCASLLE 252
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 52.6 bits (124), Expect = 2e-08
Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 8/259 (3%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG+ G +++ + GY V D G G+S A +
Sbjct: 25 PVVLIHGFPLS-GHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTV 83
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIPENMKP 174
+ ++ + + +
Sbjct: 84 LETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQE 143
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ A D + + + + + ++
Sbjct: 144 FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPT 203
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
+ + ++ VP L +HGT D ++ ++ KA +G H L+
Sbjct: 204 TWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP-SAEYVEVEGAPHGLLWT 262
Query: 295 EPDENANLVLKDMREWIDE 313
+E V + ++ +
Sbjct: 263 HAEE----VNTALLAFLAK 277
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 52.2 bits (123), Expect = 2e-08
Identities = 33/250 (13%), Positives = 69/250 (27%), Gaps = 14/250 (5%)
Query: 62 HGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121
H W++ K+ G+ V A DL G +G ++ + L+F + +
Sbjct: 9 HTICHG-AWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL 67
Query: 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPEN------MKPS 175
E L GES GG + + + ++ L
Sbjct: 68 PPGEKV-----ILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 122
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIAR 235
+ F + K+ +++ R G++ +
Sbjct: 123 VFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNIL 182
Query: 236 VCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGE 295
+ ++ + V D + P E + +G H L +
Sbjct: 183 AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDK--VYKVEGGDHKLQLTK 240
Query: 296 PDENANLVLK 305
E A ++ +
Sbjct: 241 TKEIAEILQE 250
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 49.3 bits (116), Expect = 3e-07
Identities = 40/329 (12%), Positives = 78/329 (23%), Gaps = 68/329 (20%)
Query: 49 PLDQKVKATVYMTHGYGSDTG-WMFQKICISFATW----GYAVFAADLLGHGRSDGIRCY 103
+ + ++ HG + W+ S A GY V+ + G+ + Y
Sbjct: 52 SENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYY 111
Query: 104 LGDMEKVAASSL---------SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN 154
D + A S + + L G S G + + +
Sbjct: 112 SPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKL--HYVGHSQGTTIGFIAFSTNPKL 169
Query: 155 TWTGLIFSA---PLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211
F A V +KL L L + P + +
Sbjct: 170 AKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSR 229
Query: 212 KVIASNPRRYTGK---------------------PRVGTMREIARVCQYIQD-------- 242
+ + P +++ + Q ++
Sbjct: 230 ETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDW 289
Query: 243 ------------------NFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284
N + + VP +G D + P LL K + KI
Sbjct: 290 GSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIP 349
Query: 285 DGMYHSLIQGEPDENANLVLKDMREWIDE 313
+ I + V ++ +
Sbjct: 350 PYNHLDFIWAM--DAPQAVYNEIVSMMGT 376
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 48.4 bits (113), Expect = 4e-07
Identities = 37/265 (13%), Positives = 72/265 (27%), Gaps = 18/265 (6%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HGY D G +++ GY V D G G S + A
Sbjct: 25 PVVLIHGYPLD-GHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAA----D 79
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
+ + + + A + Y L P V ++
Sbjct: 80 LHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGV 139
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGT------- 229
G+ A + D I+ + +G+
Sbjct: 140 PQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYA 199
Query: 230 -MREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288
+ + + P L +HGT D + ++ + +A + +G
Sbjct: 200 VVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP-EADYVEVEGAP 258
Query: 289 HSLIQGEPDENANLVLKDMREWIDE 313
H L+ DE V ++ ++ +
Sbjct: 259 HGLLWTHADE----VNAALKTFLAK 279
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 47.9 bits (112), Expect = 5e-07
Identities = 37/260 (14%), Positives = 74/260 (28%), Gaps = 17/260 (6%)
Query: 57 TVYMTHGYG--SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
V + HG G +++ ++ + I Y V A D+LG G++ +
Sbjct: 24 PVILIHGGGAGAESEGNWRNV-IPILARHYRVIAMDMLGFGKTAKPDIEYTQDRR----- 77
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ + G AT L L+ ++ E +
Sbjct: 78 --IRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED 135
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ + G+ A+ ++ + R + +RE
Sbjct: 136 LRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQG 195
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
+ Y + KV VP L V G D V ++ + + I H +
Sbjct: 196 GLF-YDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSW--GYIIPHCGHWAMIE 252
Query: 295 EPDENANLVLKDMREWIDER 314
P++ ++ R
Sbjct: 253 HPED----FANATLSFLSLR 268
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 47.8 bits (112), Expect = 7e-07
Identities = 36/282 (12%), Positives = 76/282 (26%), Gaps = 21/282 (7%)
Query: 34 YFETPNG-KLFTQSFLPLDQKVKA-TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADL 91
F G ++ +P ++ K V GY G+ + + + GY F D
Sbjct: 59 TFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWL--FWPSMGYICFVMDT 116
Query: 92 LGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS 151
G G E F +P +F +++ + Q
Sbjct: 117 RGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQV 176
Query: 152 EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL 211
+ S + + L + + + +
Sbjct: 177 DQERIVIAGGSQGGG-------IALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYA 229
Query: 212 KVIASNPRRYTGKPRVGTMREIARVCQYIQDNF-SKVTVPFLTVHGTADGVTCPTSSKLL 270
++ + R + + NF ++ +P L G D + P++
Sbjct: 230 EI-----TNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAA 284
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
Y + K I+IY H +K +++ +
Sbjct: 285 YNYY-AGPKEIRIYPYNNHEGGGSFQAVEQ---VKFLKKLFE 322
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 47.2 bits (110), Expect = 8e-07
Identities = 46/264 (17%), Positives = 75/264 (28%), Gaps = 22/264 (8%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ +HG+ + ++ I A GY V A D GHGRS
Sbjct: 21 PIVFSHGWPLN-ADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADD---- 75
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI-------P 169
+ E LFG S GG + + + + P
Sbjct: 76 ---LAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANP 132
Query: 170 ENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK--VIASNPRRYTGKPRV 227
+ L + + + G + V + +
Sbjct: 133 GGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKN 192
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGM 287
A ++ K+ VP L VHG AD V +S + ++KIY G
Sbjct: 193 AYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAAL-VKGSTLKIYSGA 251
Query: 288 YHSLIQGEPDENANLVLKDMREWI 311
H L D+ + D+ +I
Sbjct: 252 PHGLTDTHKDQ----LNADLLAFI 271
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 47.6 bits (111), Expect = 8e-07
Identities = 40/297 (13%), Positives = 73/297 (24%), Gaps = 26/297 (8%)
Query: 33 KYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92
+ + + +L++ F + + G + A G V D
Sbjct: 3 RIVPSGDVELWSDDFGDPA---DPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHR 59
Query: 93 GHGRSDGIRCYLG--DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150
GRS ++AA +++ + + A
Sbjct: 60 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLS 119
Query: 151 SEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM--PDNKMVGKAIKDP 208
S G + I M+ + G D A M P + K
Sbjct: 120 SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRV 179
Query: 209 EKLKVIASNPRRYTGKPRVGTMREIARV-----------------CQYIQDNFSKVTVPF 251
K ++++ + +VTVP
Sbjct: 180 SKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPT 239
Query: 252 LTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMR 308
L + D + K L +A + GM H+L A ++L R
Sbjct: 240 LVIQAEHDPIAPAPHGKHLAGLIPTAR--LAEIPGMGHALPSSVHGPLAEVILAHTR 294
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 47.3 bits (110), Expect = 9e-07
Identities = 46/281 (16%), Positives = 82/281 (29%), Gaps = 12/281 (4%)
Query: 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92
T +G +F + + P D V HG+ + + F + GY V A D
Sbjct: 2 TVTTSDGTNIFYKDWGPRDGL---PVVFHHGWPLS-ADDWDNQMLFFLSHGYRVIAHDRR 57
Query: 93 GHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE 152
GHGRSD A + + + A
Sbjct: 58 GHGRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKA 117
Query: 153 PNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK 212
P+ + F L A + +P G + +
Sbjct: 118 VLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQ 177
Query: 213 VIASNPRRYTGKPRVGTMREI--ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLL 270
+ + E A D+ ++ VP L HGT D V +
Sbjct: 178 GLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPK 237
Query: 271 YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWI 311
+ A+ ++K Y+G+ H ++ P+ + D+ ++
Sbjct: 238 SAELL-ANATLKSYEGLPHGMLSTHPEV----LNPDLLAFV 273
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 46.8 bits (109), Expect = 1e-06
Identities = 37/259 (14%), Positives = 77/259 (29%), Gaps = 12/259 (4%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V +HG+ D M++ ++ GY A D G GRSD + A ++
Sbjct: 21 PVLFSHGWLLD-ADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG--NDYDTFADDIA 77
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176
D + + + G + + G + P+ +
Sbjct: 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG-AVTPLFGQKPDYPQGVP 136
Query: 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRR---YTGKPRVGTMREI 233
L +F L D + D I + + +
Sbjct: 137 LDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVT 196
Query: 234 ARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293
A + + +K+ VP L +HG D + ++ + + +K+Y H
Sbjct: 197 AFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIK-GAELKVYKDAPHGFAV 255
Query: 294 GEPDENANLVLKDMREWID 312
+ + +D+ ++
Sbjct: 256 THAQQ----LNEDLLAFLK 270
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 47.2 bits (111), Expect = 1e-06
Identities = 32/251 (12%), Positives = 65/251 (25%), Gaps = 26/251 (10%)
Query: 79 FATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSL------------SFFKHVRDSEP 126
F T G+A +G SDG + + + +++ S K
Sbjct: 132 FLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 191
Query: 127 YRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLF 186
+ + + G+S G ++ A + + + L G
Sbjct: 192 WANGKVAMTGKSYLGTMAYGAATTGVEG-LELILAEAGISSWYNYYRENGLVRSPGGFPG 250
Query: 187 GLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQ----- 241
D AA+ ++ D + + + R+ Q+
Sbjct: 251 EDLDVLAALTYSRN-----LDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYL 305
Query: 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENAN 301
N KV L VHG D P + ++ H + +
Sbjct: 306 INTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSID-- 363
Query: 302 LVLKDMREWID 312
+ + +
Sbjct: 364 -FSETINAYFV 373
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 46.0 bits (107), Expect = 2e-06
Identities = 34/259 (13%), Positives = 72/259 (27%), Gaps = 16/259 (6%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
+ + HG+G + +++ I ++ + + DL G GRS G A
Sbjct: 11 NVHLVLLHGWGLN-AEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ 68
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ K + L + L+ S P + + +
Sbjct: 69 QAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQ 128
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ LA + +A+K + + V
Sbjct: 129 QLSDDQQRTVERFLALQTMGTETARQDARALKK--------TVLALPMPEVDVLNGGLEI 180
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
++ V++PFL ++G DG+ +L + ++ I+ H+
Sbjct: 181 LKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSE--SYIFAKAAHAPFIS 238
Query: 295 EPDENANLVLKDMREWIDE 313
P E +
Sbjct: 239 HPAE----FCHLLVALKQR 253
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 44.5 bits (103), Expect = 7e-06
Identities = 32/262 (12%), Positives = 61/262 (23%), Gaps = 13/262 (4%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
V + HG G +Q + A A DL GHG + C
Sbjct: 16 TPLVVLVHGLLGS-GADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQ 74
Query: 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174
+ M G A + + +
Sbjct: 75 TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARW 134
Query: 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIA 234
+ + + + V ++ ++ +IA +
Sbjct: 135 QHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSL 194
Query: 235 RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294
Y+ + +P V G D A S+ S H++
Sbjct: 195 AKQPYLLPALQALKLPIHYVCGEQDSKFQQL--------AESSGLSYSQVAQAGHNVHHE 246
Query: 295 EPDENANLVLKDMREWIDERVE 316
+P A +V + I ++
Sbjct: 247 QPQAFAKIV----QAMIHSIID 264
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 41.7 bits (96), Expect = 5e-05
Identities = 35/271 (12%), Positives = 60/271 (22%), Gaps = 67/271 (24%)
Query: 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114
KA + HG + + +A G+ + A D HG +G V
Sbjct: 24 KALLLALHGLQGSKEHILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 115 LSFFKHVRDSEPYRD-------LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167
++ + LP FL G S+G + L F F
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVA-HLLLAEGFRPRGVLAFIGSGFP 141
Query: 168 IPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRV 227
+ + P P
Sbjct: 142 MKLPQGQVVEDPGVL--------ALYQAPPATRGEAYGGVPLLH---------------- 177
Query: 228 GTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS----IKI 283
+HG+ D + + E +
Sbjct: 178 --------------------------LHGSRDHIVPLARMEKTLEALRPHYPEGRLARFV 211
Query: 284 YDGMYHSLIQGEPDENANLVLKDMREWIDER 314
+G H+L A + L + W++ R
Sbjct: 212 EEGAGHTL----TPLMARVGLAFLEHWLEAR 238
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 41.0 bits (94), Expect = 9e-05
Identities = 42/290 (14%), Positives = 76/290 (26%), Gaps = 21/290 (7%)
Query: 33 KYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLL 92
Y E ++ P D V HG + ++++ I A + A DL+
Sbjct: 10 HYVEVLGERMHYVDVGPRD---GTPVLFLHGNPTS-SYLWRNIIPHVAP-SHRCIAPDLI 64
Query: 93 GHGRSDG----------IRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGA 142
G G+SD +R +E + + H S G A
Sbjct: 65 GMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIA 124
Query: 143 ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVG 202
+ + W ++ + + L +
Sbjct: 125 CMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMD 184
Query: 203 KAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262
+ K R P G I + + + + VP L GT +
Sbjct: 185 HYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLI 244
Query: 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
P + L E + H L + PD + ++ W+
Sbjct: 245 PPAEAARLAESLPNCK--TVDIGPGLHYLQEDNPDL----IGSEIARWLP 288
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (94), Expect = 1e-04
Identities = 25/270 (9%), Positives = 56/270 (20%), Gaps = 31/270 (11%)
Query: 58 VYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG + + I+ G V DL S ++ + +
Sbjct: 5 VIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE--QVQGFREAVVP 62
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGA-ATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175
L S GG L+ + N + + S+P +
Sbjct: 63 IMAKAPQ-------GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL 115
Query: 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE-------------KLKVIASNPRRYT 222
K ++ + DP + +P
Sbjct: 116 KWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATV 175
Query: 223 GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEK-------AS 275
+ + + + + F + + V + +
Sbjct: 176 WRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLA 235
Query: 276 SADKSIKIYDGMYHSLIQGEPDENANLVLK 305
G+ H+ +
Sbjct: 236 RGAIVRCPMAGISHTAWHSNRTLYETCIEP 265
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 39.4 bits (91), Expect = 4e-04
Identities = 15/115 (13%), Positives = 26/115 (22%), Gaps = 15/115 (13%)
Query: 55 KATVYMTHGYGSDTGWM-----FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEK 109
+ V + HG + + I + G V+ A+L G DG +
Sbjct: 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLA 67
Query: 110 VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164
L+ + G T P +
Sbjct: 68 YVKQVLAATGATK----------VNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.6 bits (89), Expect = 5e-04
Identities = 15/114 (13%), Positives = 29/114 (25%), Gaps = 17/114 (14%)
Query: 55 KATVYMTHGYGSDTGWM----FQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110
K + + HG + + I + G V+ ++ S+ E++
Sbjct: 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQL 60
Query: 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAP 164
+ L G S GG T+ P+
Sbjct: 61 LQQVEEIVALSGQPKVN------LIGHSHGG-PTIRYVAAVRPDLIASATSVGA 107
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 38.9 bits (90), Expect = 6e-04
Identities = 10/100 (10%), Positives = 20/100 (20%), Gaps = 12/100 (12%)
Query: 58 VYMTHGYG-SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
+ + G G + GY + D + ++
Sbjct: 34 ILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN--------DTQVNTEYMVN 85
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTW 156
+ L + S GG P+
Sbjct: 86 AITALYAGSGNNKL--PVLTWSQGGLVAQ-WGLTFFPSIR 122
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 6e-04
Identities = 40/296 (13%), Positives = 75/296 (25%), Gaps = 52/296 (17%)
Query: 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116
V + HG+ + ++ + A GY V A D+ G+G S +V
Sbjct: 34 AVCLCHGFPES-WYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEV-----L 87
Query: 117 FFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV--------- 167
+ V + G GG M + P
Sbjct: 88 CKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLE 147
Query: 168 ------------------IPENMKPSKLHLFMYGLLFGLADTWAAM-------------P 196
+ E L L ++ +M P
Sbjct: 148 SIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSP 207
Query: 197 DNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHG 256
+ + + + + E + + P + K+ +P L V
Sbjct: 208 EEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTA 267
Query: 257 TADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312
D V P S+ + + + H +P E V + + +W+D
Sbjct: 268 EKDFVLVPQMSQHMEDWIPHL--KRGHIEDCGHWTQMDKPTE----VNQILIKWLD 317
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 323 | |||
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.98 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.97 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.97 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.96 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.95 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.94 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.94 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.94 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.93 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.93 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.93 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.92 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.92 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.92 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.9 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.9 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.89 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.89 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.88 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.87 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.87 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.87 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.87 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.87 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.86 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.84 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.84 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.83 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.83 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.82 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.81 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.81 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.8 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.8 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.79 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.79 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.78 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.76 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.75 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.68 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.68 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.62 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.6 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.58 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.54 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.47 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.46 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.38 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.35 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.25 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.21 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.19 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.15 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.13 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.96 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.87 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.77 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.76 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.51 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.39 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.36 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.33 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.23 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.2 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.19 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.16 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.96 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.94 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 97.48 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 97.27 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 97.15 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 97.15 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 97.11 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 97.03 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 96.78 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 96.39 |
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-36 Score=240.71 Aligned_cols=262 Identities=15% Similarity=0.092 Sum_probs=174.7
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCChH
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGDME 108 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~ 108 (323)
...++.+.|| +|+|..+|. +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|.... ...++++
T Consensus 12 ~~~~v~~~~g~~i~y~~~G~-----gp~vlllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 85 (322)
T d1zd3a2 12 SHGYVTVKPRVRLHFVELGS-----GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCME 85 (322)
T ss_dssp EEEEEEEETTEEEEEEEECC-----SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHH
T ss_pred ceeEEEECCCCEEEEEEEcC-----CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEecccccccccccccccccccc
Confidence 4557788899 999999873 479999999998887 8999999999999999999999999998643 2345889
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH----------
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH---------- 178 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~---------- 178 (323)
++++++.++++++..+ +++++||||||.+++.+|.++|++ |+++|++++..............
T Consensus 86 ~~~~~i~~l~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 86 VLCKEMVTFLDKLGLS------QAVFIGHDWGGMLVWYMALFYPER-VRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp HHHHHHHHHHHHHTCS------CEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred ccchhhhhhhhccccc------ccccccccchHHHHHHHHHhCCcc-ccceEEEcccccccccccchhhhhhccchhhhH
Confidence 9999999999998754 899999999999999999999999 99999998654432221111000
Q ss_pred ----------HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCc-----CCCCchhHHHH-----------
Q 020633 179 ----------LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRY-----TGKPRVGTMRE----------- 232 (323)
Q Consensus 179 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------- 232 (323)
..................... .................. ...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASDES----VLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFR 234 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTTSC----CCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccchh----hhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccc
Confidence 000000000000000000000 000000000000000000 00000000000
Q ss_pred --------HH-HHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHH
Q 020633 233 --------IA-RVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLV 303 (323)
Q Consensus 233 --------~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 303 (323)
.. ...........++++|+++|+|++|.+++++..+.+.+.+ ++.++++++++||++++++|+ ++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~v 308 (322)
T d1zd3a2 235 GPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDKPT----EV 308 (322)
T ss_dssp HHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC--TTCEEEEETTCCSCHHHHSHH----HH
T ss_pred cccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHH----HH
Confidence 00 0011233556788999999999999999999988888777 789999999999999966655 49
Q ss_pred HHHHHHHHHHHH
Q 020633 304 LKDMREWIDERV 315 (323)
Q Consensus 304 ~~~i~~fl~~~~ 315 (323)
.+.|.+||+++.
T Consensus 309 ~~~i~~FL~~~~ 320 (322)
T d1zd3a2 309 NQILIKWLDSDA 320 (322)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhcC
Confidence 999999999874
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=3.8e-36 Score=233.69 Aligned_cols=257 Identities=19% Similarity=0.236 Sum_probs=166.8
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.|| +|+|..+|+++ +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... .++++++++
T Consensus 2 ~i~~~dG~~l~y~~~G~~~---~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~ 76 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRD---GLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPST-GHDMDTYAA 76 (275)
T ss_dssp EEECTTSCEEEEEEESCTT---SCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred EEEecCCCEEEEEEecCCC---CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccc-ccccccccc
Confidence 5789999 99999999865 678999999998877 89999999999999999999999999986443 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEech-hHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch------hhHHHHHhhhh
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESM-GGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP------SKLHLFMYGLL 185 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~-Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~------~~~~~~~~~~~ 185 (323)
|+.++++++..+ +++++|||+ ||.+++.+|..+|++ |+++|++++.......... ..........+
T Consensus 77 ~~~~~l~~l~~~------~~~~vg~s~~G~~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
T d1a88a_ 77 DVAALTEALDLR------GAVHIGHSTGGGEVARYVARAEPGR-VAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAAL 149 (275)
T ss_dssp HHHHHHHHHTCC------SEEEEEETHHHHHHHHHHHHSCTTS-EEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred cccccccccccc------ccccccccccccchhhcccccCcch-hhhhhhhcccccccccchhhhhhhhhhhhhhhhhhh
Confidence 999999998744 788999887 666777788899999 9999999875432211110 00111111100
Q ss_pred h----hhhcccccCCccccc-ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCC
Q 020633 186 F----GLADTWAAMPDNKMV-GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 186 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~ 258 (323)
. ............... .................. ............... +....+.++++|+++++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~ 225 (275)
T d1a88a_ 150 AANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM----MGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTD 225 (275)
T ss_dssp HHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH----HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETT
T ss_pred hhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhc----ccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCC
Confidence 0 000000000000000 000001111000000000 000011111111111 12234567899999999999
Q ss_pred CcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|.+.. +.+.+.+ +++++++++++||++++++|+ ++.+.|.+||+
T Consensus 226 D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~Fl~ 274 (275)
T d1a88a_ 226 DQVVPYADAAPKSAELL--ANATLKSYEGLPHGMLSTHPE----VLNPDLLAFVK 274 (275)
T ss_dssp CSSSCSTTTHHHHHHHS--TTEEEEEETTCCTTHHHHCHH----HHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHH----HHHHHHHHHHc
Confidence 999988654 5555666 789999999999999976554 49999999986
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.2e-36 Score=238.60 Aligned_cols=267 Identities=16% Similarity=0.156 Sum_probs=176.0
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
+.+.+..++.. +| +|+|..+++++ +|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+.+.. ..
T Consensus 4 ~~p~~~~~i~~-~g~~i~y~~~G~~~---~p~lvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~-~~ 76 (291)
T d1bn7a_ 4 GFPFDPHYVEV-LGERMHYVDVGPRD---GTPVLFLHGNPTSSY-LWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDL-DY 76 (291)
T ss_dssp CCCCCCEEEEE-TTEEEEEEEESCSS---SSCEEEECCTTCCGG-GGTTTHHHHTT-TSCEEEECCTTSTTSCCCSC-CC
T ss_pred CCCCCCeEEEE-CCEEEEEEEeCCCC---CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEEeCCCCcccccccc-cc
Confidence 45566666654 77 99999999765 689999999998877 88899999965 79999999999999986543 45
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
+.+++++|+.++++++..+ +++++||||||.+++.++.++|++ +++++++++.....................
T Consensus 77 ~~~~~~~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-~~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
T d1bn7a_ 77 FFDDHVRYLDAFIEALGLE------EVVLVIHDWGSALGFHWAKRNPER-VKGIACMEFIRPIPTWDEWPEFARETFQAF 149 (291)
T ss_dssp CHHHHHHHHHHHHHHTTCC------SEEEEEEHHHHHHHHHHHHHCGGG-EEEEEEEEECCCBCSGGGSCHHHHHHHHHH
T ss_pred chhHHHHHHhhhhhhhccc------cccccccccccchhHHHHHhCCcc-eeeeeeeccccCCccchhhhhhhhhHHHHH
Confidence 8999999999999998754 899999999999999999999999 999999876654333222111111111100
Q ss_pred hh--hhcccccCCc-------ccccccccCChHHHHHHhcCCCCcCCC---------CchhHHHHHHHHHHHHHhcCCCC
Q 020633 186 FG--LADTWAAMPD-------NKMVGKAIKDPEKLKVIASNPRRYTGK---------PRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 186 ~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
.. .......... ........................... ...................++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (291)
T d1bn7a_ 150 RTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQS 229 (291)
T ss_dssp TSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred hhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcC
Confidence 00 0000000000 000000000011111111000000000 00000011111122233445678
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|+++++|++|.++|.+.++.+.+.+ +++++++++++||++++++|++ +.+.|.+||+.
T Consensus 230 ~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~fL~~ 289 (291)
T d1bn7a_ 230 PVPKLLFWGTPGVLIPPAEAARLAESL--PNCKTVDIGPGLHYLQEDNPDL----IGSEIARWLPG 289 (291)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHS--TTEEEEEEEEESSCGGGTCHHH----HHHHHHHHSGG
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHC--CCCEEEEECCCCCchHHhCHHH----HHHHHHHHHHh
Confidence 999999999999999999999999998 7899999999999999776655 88999999864
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.1e-36 Score=235.08 Aligned_cols=254 Identities=15% Similarity=0.184 Sum_probs=166.6
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
++++.|| +|+|..+|. +++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... ..+..++++
T Consensus 2 ~~~t~dG~~l~y~~~G~-----g~~ivlvHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 74 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWGQ-----GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWD-GYDFDTFAD 74 (274)
T ss_dssp EEECTTSCEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred eEECcCCCEEEEEEECC-----CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCcccccccc-cccchhhHH
Confidence 5788999 999999974 368999999998887 89999999998999999999999999986543 358899999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhc-CCCceeEEEEccCcccCCCCCch------hhHHHHHhhh-
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQS-EPNTWTGLIFSAPLFVIPENMKP------SKLHLFMYGL- 184 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~v~~~vl~~~~~~~~~~~~~------~~~~~~~~~~- 184 (323)
|+.++++++..+ +++++||||||.+++.+++++ |++ |++++++++.......... ......+...
T Consensus 75 dl~~~l~~l~~~------~~~lvGhS~Gg~~~~~~~a~~~p~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (274)
T d1a8qa_ 75 DLNDLLTDLDLR------DVTLVAHSMGGGELARYVGRHGTGR-LRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGV 147 (274)
T ss_dssp HHHHHHHHTTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhh------hhcccccccccchHHHHHHHhhhcc-ceeEEEEeccCccchhhhhccchhhHHHHHHHHhhh
Confidence 999999988744 899999999999998876664 777 9999999875433221110 0000000000
Q ss_pred -------hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEe
Q 020633 185 -------LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 185 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~ 255 (323)
.......+. ...................... ............... +..+.++++++|+++|+
T Consensus 148 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 219 (274)
T d1a8qa_ 148 LTERSQFWKDTAEGFF---SANRPGNKVTQGNKDAFWYMAM-----AQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVH 219 (274)
T ss_dssp HHHHHHHHHHHHHHHT---TTTSTTCCCCHHHHHHHHHHHT-----TSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred hhhhHHHhhhhhhhhh---hccccchhhhhhHHHHHHHhhh-----ccchhhhhhHHHHhhccchHHHHHhccceeeeec
Confidence 000000000 0000000001111111100000 001111111111111 12345678999999999
Q ss_pred eCCCcccCchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 256 GTADGVTCPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 256 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
|++|.+++.+.. +.+.+.+ +++++++++++||+.+++. +..+++.+.|.+||++
T Consensus 220 G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~~~--~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 220 GDDDQVVPIDATGRKSAQII--PNAELKVYEGSSHGIAMVP--GDKEKFNRDLLEFLNK 274 (274)
T ss_dssp ETTCSSSCGGGTHHHHHHHS--TTCEEEEETTCCTTTTTST--THHHHHHHHHHHHHTC
T ss_pred cCCCCCcCHHHHHHHHHHhC--CCCEEEEECCCCCcccccc--cCHHHHHHHHHHHHCc
Confidence 999999998765 5566666 7899999999999987643 3356799999999863
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=2.6e-35 Score=231.61 Aligned_cols=259 Identities=14% Similarity=0.073 Sum_probs=166.9
Q ss_pred EEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccH-HHHHHHHhhCCcEEEEecCCCCcCCCCCc--ccCCChHHH
Q 020633 35 FETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMF-QKICISFATWGYAVFAADLLGHGRSDGIR--CYLGDMEKV 110 (323)
Q Consensus 35 ~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~~~~~ 110 (323)
+...+| +|+|..+|+++ +|+|||+||++++.. .| ..+.+.|.++||+|+++|+||||.|+... ...++++++
T Consensus 4 ~~~~g~~~i~y~~~G~~~---~p~vvl~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 79 (297)
T d1q0ra_ 4 IVPSGDVELWSDDFGDPA---DPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGEL 79 (297)
T ss_dssp EEEETTEEEEEEEESCTT---SCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHH
T ss_pred EEEECCEEEEEEEecCCC---CCEEEEECCCCcChh-HHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchh
Confidence 345566 99999999755 789999999998876 55 56788898899999999999999997433 233589999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhH-------------
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKL------------- 177 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~------------- 177 (323)
++|+..+++++..+ +++++||||||.+++.+|..+|++ |+++|++++.............
T Consensus 80 ~~d~~~ll~~l~~~------~~~lvGhS~Gg~~a~~~a~~~P~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (297)
T d1q0ra_ 80 AADAVAVLDGWGVD------RAHVVGLSMGATITQVIALDHHDR-LSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 152 (297)
T ss_dssp HHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCC
T ss_pred hhhhcccccccccc------ceeeccccccchhhhhhhcccccc-eeeeEEEccccccccchhhhHHHhhhhhhhhhhhh
Confidence 99999999998754 899999999999999999999999 9999999876432211100000
Q ss_pred ----HHHHhhhhhhhhccc----cc--CCccccccccc-CChH-H----HHHHhcCCCCcCCCCchhHHHHHHHHHHHHH
Q 020633 178 ----HLFMYGLLFGLADTW----AA--MPDNKMVGKAI-KDPE-K----LKVIASNPRRYTGKPRVGTMREIARVCQYIQ 241 (323)
Q Consensus 178 ----~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~-~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (323)
............... .. ........... .... . ................ ..... ....+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~ 229 (297)
T d1q0ra_ 153 PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYA-HYSLT--LPPPSRA 229 (297)
T ss_dssp CCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCG-GGGCC--CCCGGGG
T ss_pred hhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhh-hhhhh--hccccch
Confidence 000000000000000 00 00000000000 0000 0 0001000000000000 00000 0000123
Q ss_pred hcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 242 DNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 242 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
..+++|++|+++|+|++|.++|++.++.+.+.+ +++++++++++||+++. +..+++.+.|.+||++
T Consensus 230 ~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~gH~~~~----e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 230 AELREVTVPTLVIQAEHDPIAPAPHGKHLAGLI--PTARLAEIPGMGHALPS----SVHGPLAEVILAHTRS 295 (297)
T ss_dssp GGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTS--TTEEEEEETTCCSSCCG----GGHHHHHHHHHHHHHH
T ss_pred hhhhccCCceEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCcchh----hCHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999998 88999999999999984 4455588888888875
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-37 Score=227.13 Aligned_cols=200 Identities=19% Similarity=0.245 Sum_probs=156.6
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHH--HHHHHhhCCcEEEEecCCCCcCCCCCccc-
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQK--ICISFATWGYAVFAADLLGHGRSDGIRCY- 103 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~G~G~s~~~~~~- 103 (323)
++.++.++. .+| +|+|+.+++..+..+++|||+||++++.. .|.. .++.|+++||+|+++|+||||.|+.....
T Consensus 4 ~~~~e~~i~-v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~-~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~ 81 (208)
T d1imja_ 4 VEQREGTIQ-VQGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA 81 (208)
T ss_dssp EEECCCCEE-ETTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS
T ss_pred CCceEEEEE-ECCEEEEEEEecCCCCCCCCeEEEECCCCCChh-HHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccc
Confidence 444555665 478 99999999876677899999999998876 6765 46889999999999999999999865322
Q ss_pred CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 104 LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
..+.....+++.++++.+..+ +++|+||||||.+++.+|.++|++ ++++|+++|......
T Consensus 82 ~~~~~~~~~~l~~~~~~l~~~------~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lV~~~p~~~~~~------------- 141 (208)
T d1imja_ 82 PIGELAPGSFLAAVVDALELG------PPVVISPSLSGMYSLPFLTAPGSQ-LPGFVPVAPICTDKI------------- 141 (208)
T ss_dssp CTTSCCCTHHHHHHHHHHTCC------SCEEEEEGGGHHHHHHHHTSTTCC-CSEEEEESCSCGGGS-------------
T ss_pred ccchhhhhhhhhhcccccccc------cccccccCcHHHHHHHHHHHhhhh-cceeeecCccccccc-------------
Confidence 224445567788888888644 889999999999999999999999 999999987532000
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
....+.++++|+|+|+|++|.++|
T Consensus 142 --------------------------------------------------------~~~~~~~i~~P~Lii~G~~D~~~~ 165 (208)
T d1imja_ 142 --------------------------------------------------------NAANYASVKTPALIVYGDQDPMGQ 165 (208)
T ss_dssp --------------------------------------------------------CHHHHHTCCSCEEEEEETTCHHHH
T ss_pred --------------------------------------------------------ccccccccccccccccCCcCcCCc
Confidence 012345688999999999999887
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+. +..+.+ ++.++.+++++||..++++|++ +.+.+.+||++
T Consensus 166 ~~~--~~~~~~--~~~~~~~i~~~gH~~~~~~p~~----~~~~l~~Fl~~ 207 (208)
T d1imja_ 166 TSF--EHLKQL--PNHRVLIMKGAGHPCYLDKPEE----WHTGLLDFLQG 207 (208)
T ss_dssp HHH--HHHTTS--SSEEEEEETTCCTTHHHHCHHH----HHHHHHHHHHT
T ss_pred HHH--HHHHhC--CCCeEEEECCCCCchhhhCHHH----HHHHHHHHHhc
Confidence 542 344455 7899999999999998666554 89999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.8e-36 Score=237.18 Aligned_cols=259 Identities=18% Similarity=0.182 Sum_probs=165.4
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKV 110 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 110 (323)
+.++. .+| +|+|..++.+ +.+|+||++||+++++. .|......+.++||+|+++|+||||.|+......++++.+
T Consensus 4 ~~~~~-~~g~~i~y~~~g~~--~~~~~iv~lHG~~g~~~-~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 79 (290)
T d1mtza_ 4 ENYAK-VNGIYIYYKLCKAP--EEKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYG 79 (290)
T ss_dssp EEEEE-ETTEEEEEEEECCS--SCSEEEEEECCTTTCCS-GGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHH
T ss_pred cCeEE-ECCEEEEEEEcCCC--CCCCeEEEECCCCCchH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccch
Confidence 34444 588 9999999975 34689999999987766 5555566677789999999999999998765556689999
Q ss_pred hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh-hhhhh
Q 020633 111 AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL-LFGLA 189 (323)
Q Consensus 111 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 189 (323)
++|+.++++++.. ..+++++||||||.+++.+|.++|++ |++++++++......... ........ .....
T Consensus 80 ~~~l~~ll~~l~~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~ 150 (290)
T d1mtza_ 80 VEEAEALRSKLFG-----NEKVFLMGSSYGGALALAYAVKYQDH-LKGLIVSGGLSSVPLTVK---EMNRLIDELPAKYR 150 (290)
T ss_dssp HHHHHHHHHHHHT-----TCCEEEEEETHHHHHHHHHHHHHGGG-EEEEEEESCCSBHHHHHH---HHHHHHHTSCHHHH
T ss_pred hhhhhhhhccccc-----ccccceecccccchhhhhhhhcChhh-heeeeecccccCcccchh---hhhhhhhhhhHHHH
Confidence 9999999999853 23899999999999999999999999 999999987653211000 00000000 00000
Q ss_pred cccccCCcccccccccCChHH----HHHHhcCCCCcCCCCchhHHHHHHHHH----------------------HHHHhc
Q 020633 190 DTWAAMPDNKMVGKAIKDPEK----LKVIASNPRRYTGKPRVGTMREIARVC----------------------QYIQDN 243 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 243 (323)
...... ........... ............. ............. .+....
T Consensus 151 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (290)
T d1mtza_ 151 DAIKKY----GSSGSYENPEYQEAVNYFYHQHLLRSED-WPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDK 225 (290)
T ss_dssp HHHHHH----HHHTCTTCHHHHHHHHHHHHHHTSCSSC-CCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTT
T ss_pred HHHHHh----hhhccccchhHHHHHHHHhhhhhccccc-chHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHH
Confidence 000000 00000000000 0000000000000 0000000000000 001234
Q ss_pred CCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 244 FSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 244 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++++|+++++|++|.++| +.++.+.+.+ +++++++++++||++++++|+ ++.+.|.+||.+++
T Consensus 226 ~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 226 ISAIKIPTLITVGEYDEVTP-NVARVIHEKI--AGSELHVFRDCSHLTMWEDRE----GYNKLLSDFILKHL 290 (290)
T ss_dssp GGGCCSCEEEEEETTCSSCH-HHHHHHHHHS--TTCEEEEETTCCSCHHHHSHH----HHHHHHHHHHHTCC
T ss_pred hhcccceEEEEEeCCCCCCH-HHHHHHHHHC--CCCEEEEECCCCCchHHhCHH----HHHHHHHHHHHHhC
Confidence 56789999999999998765 6678888888 789999999999999976554 49999999998763
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=1.5e-35 Score=234.44 Aligned_cols=270 Identities=12% Similarity=0.049 Sum_probs=174.8
Q ss_pred ccCcccceeEEE---cCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 25 SQGVRNGKKYFE---TPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 25 ~~~~~~~~~~~~---~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
-.+.+++..++. ..+| +++|..+|+++ ..|+|||+||+++++. .|..+...|+++||+|+++|+||||.|...
T Consensus 15 ~~~~p~~~~~~~~~~~~~g~~~~y~~~G~~~--~~p~llllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~ 91 (310)
T d1b6ga_ 15 LDQYPFSPNYLDDLPGYPGLRAHYLDEGNSD--AEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKP 91 (310)
T ss_dssp CSSCCCCCEEEESCTTCTTCEEEEEEEECTT--CSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEE
T ss_pred ccCCCCCCceeccccCCCCEEEEEEEecCCC--CCCEEEEECCCCCchH-HHHHHHHHhhccCceEEEeeecCccccccc
Confidence 334455555554 4588 99999999763 4689999999998877 888999999999999999999999999853
Q ss_pred c-ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH
Q 020633 101 R-CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 101 ~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~ 179 (323)
. ...++++.+++|+.++++++..+ +++|+||||||.+++.+|.++|++ |+++|++++............ .
T Consensus 92 ~~~~~~~~~~~~~~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~A~~~P~~-V~~lvl~~~~~~~~~~~~~~~--~ 162 (310)
T d1b6ga_ 92 VDEEDYTFEFHRNFLLALIERLDLR------NITLVVQDWGGFLGLTLPMADPSR-FKRLIIMNACLMTDPVTQPAF--S 162 (310)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHHTCC------SEEEEECTHHHHHHTTSGGGSGGG-EEEEEEESCCCCCCTTTCTHH--H
T ss_pred cccccccccccccchhhhhhhcccc------ccccccceecccccccchhhhccc-cceEEEEcCccCCCcccchhH--H
Confidence 3 34468999999999999998854 899999999999999999999999 999999988654332222111 0
Q ss_pred HHhhhhhhh----hccccc---CCccccc---ccccCChHHHHHHhcCCCCcCCCCchhHH---------HHHHHHHHHH
Q 020633 180 FMYGLLFGL----ADTWAA---MPDNKMV---GKAIKDPEKLKVIASNPRRYTGKPRVGTM---------REIARVCQYI 240 (323)
Q Consensus 180 ~~~~~~~~~----~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 240 (323)
......... ...... ....... .... .......+................ ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T d1b6ga_ 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTL-TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAI 241 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTC-CHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred HHhhcchhhhhhhhhhhccchhhhhhhhhhccCccc-cHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhh
Confidence 000000000 000000 0000000 0000 011111111110000000000000 0000001112
Q ss_pred HhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCC-ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 241 QDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.....++++|+++++|++|.+++++..+.+.+.+ ++ .++++++++||+++ ++..+.+.+.|.+||++
T Consensus 242 ~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~i~~~GH~~~----~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 242 SFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALI--NGCPEPLEIADAGHFVQ----EFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHS--TTCCCCEEETTCCSCGG----GGHHHHHHHHHHHHHHT
T ss_pred HHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCccEEEECCCcCchh----hhCHHHHHHHHHHHHhC
Confidence 2234578999999999999999999999888888 44 47889999999987 45556699999999874
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.9e-37 Score=237.87 Aligned_cols=258 Identities=13% Similarity=0.088 Sum_probs=169.1
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
+.....+.+| +++|..+|. +|+|||+||++++.. ..|..+++.|+ +||+|+++|+||||.|........+.
T Consensus 3 ~~~~~i~~~G~~~~Y~~~G~-----G~pvvllHG~~~~~~~~~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~~~~~~~ 76 (271)
T d1uk8a_ 3 EIGKSILAAGVLTNYHDVGE-----GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYNYSK 76 (271)
T ss_dssp TCCEEEEETTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCCCCH
T ss_pred CCCCEEEECCEEEEEEEEee-----CCeEEEECCCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCCCCCccccccccccc
Confidence 3445667899 999999985 368999999987654 13455677775 47999999999999998766655688
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh--
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL-- 185 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-- 185 (323)
+.+++++..+++++..+ +++++||||||.+++.+|.++|++ ++++|++++.....................
T Consensus 77 ~~~~~~~~~~~~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~-~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1uk8a_ 77 DSWVDHIIGIMDALEIE------KAHIVGNAFGGGLAIATALRYSER-VDRMVLMGAAGTRFDVTEGLNAVWGYTPSIEN 149 (271)
T ss_dssp HHHHHHHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCSCCCCCHHHHHHHTCCSCHHH
T ss_pred cccchhhhhhhhhhcCC------CceEeeccccceeehHHHHhhhcc-chheeecccCCCcccchhhhhhhhhccchhHH
Confidence 99999999999988744 899999999999999999999999 999999987654332221111000000000
Q ss_pred -hhhhcccccCCcccccccccCChHHHHHHhcCCCCc----CCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCc
Q 020633 186 -FGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRY----TGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 260 (323)
......+.. .... ................. ......................+.++++|+|+|+|++|.
T Consensus 150 ~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 223 (271)
T d1uk8a_ 150 MRNLLDIFAY--DRSL----VTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQ 223 (271)
T ss_dssp HHHHHHHHCS--CGGG----CCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHHHHHhh--hccc----chhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCC
Confidence 000000000 0000 00000000000000000 000000000111111111234567889999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++|.+..+.+.+.+ +++++++++++||++++++|+ ++.+.|.+||++
T Consensus 224 ~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 224 VVPLSSSLRLGELI--DRAQLHVFGRCGHWTQIEQTD----RFNRLVVEFFNE 270 (271)
T ss_dssp SSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHTHH----HHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHhC--CCCEEEEECCCCCchHHHCHH----HHHHHHHHHHhc
Confidence 99999999999998 789999999999999966554 499999999975
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=7.2e-37 Score=236.97 Aligned_cols=254 Identities=15% Similarity=0.110 Sum_probs=163.3
Q ss_pred eeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 32 KKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 32 ~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
+.++ ..|| +|+|...|. +|+|||+||++++.. ..|..+.+.|++ ||+|+++|+||||.|+.... ..+.+
T Consensus 4 ~~~~-~~dg~~l~y~~~G~-----g~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~-~~~~~ 75 (268)
T d1j1ia_ 4 ERFV-NAGGVETRYLEAGK-----GQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDI-EYTQD 75 (268)
T ss_dssp EEEE-EETTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSS-CCCHH
T ss_pred CeEE-EECCEEEEEEEEcC-----CCeEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccccccccCCcc-ccccc
Confidence 3444 4589 999998885 358999999987643 246677888854 79999999999999986543 35889
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.+++++.++++.+..+ .+++++|||+||.+++.+|.++|++ |+++|+++|........................
T Consensus 76 ~~~~~~~~~i~~l~~~-----~~~~liG~S~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T d1j1ia_ 76 RRIRHLHDFIKAMNFD-----GKVSIVGNSMGGATGLGVSVLHSEL-VNALVLMGSAGLVVEIHEDLRPIINYDFTREGM 149 (268)
T ss_dssp HHHHHHHHHHHHSCCS-----SCEEEEEEHHHHHHHHHHHHHCGGG-EEEEEEESCCBCCCC----------CCSCHHHH
T ss_pred cccccchhhHHHhhhc-----ccceeeeccccccccchhhccChHh-hheeeecCCCccccccchhhhhhhhhhhhhhhh
Confidence 9999999999988653 3799999999999999999999999 999999998654332211110000000000000
Q ss_pred hcccccCCccccccccc-CCh-HHHHHHhcCCCCcCCCCchhHHHHHHHHHHH------HHhcCCCCCcCEEEEeeCCCc
Q 020633 189 ADTWAAMPDNKMVGKAI-KDP-EKLKVIASNPRRYTGKPRVGTMREIARVCQY------IQDNFSKVTVPFLTVHGTADG 260 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~l~i~g~~D~ 260 (323)
..... ....... ... ............ ............... ..+.+.++++|+++|+|++|.
T Consensus 150 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~ 220 (268)
T d1j1ia_ 150 VHLVK-----ALTNDGFKIDDAMINSRYTYATDE----ATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDK 220 (268)
T ss_dssp HHHHH-----HHSCTTCCCCHHHHHHHHHHHHSH----HHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHH-----HHhhhhhhhhhhhhHHHHHhhhhh----hhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCC
Confidence 00000 0000000 000 000000000000 000000000000000 123457889999999999999
Q ss_pred ccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 261 VTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++|++.++.+.+.+ +++++++++++||++++++|+ ++.+.|.+||.++
T Consensus 221 ~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~FL~~r 268 (268)
T d1j1ia_ 221 VVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHPE----DFANATLSFLSLR 268 (268)
T ss_dssp SSCHHHHHHHHHHC--TTEEEEEESSCCSCHHHHSHH----HHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHhC--CCCEEEEECCCCCchHHhCHH----HHHHHHHHHHcCC
Confidence 99999999999998 789999999999999965554 5999999999863
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=1.2e-35 Score=231.70 Aligned_cols=248 Identities=16% Similarity=0.167 Sum_probs=159.3
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC----ChHHHhhcH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG----DMEKVAASS 114 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~----~~~~~~~d~ 114 (323)
+++|...|+++ +|+|||+||++++.. ..|..+++.|++ ||+|+++|+||||.|+....... +.++.++|+
T Consensus 15 ~~h~~~~G~~~---~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i 90 (281)
T d1c4xa_ 15 ASHALVAGDPQ---SPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQI 90 (281)
T ss_dssp CEEEEEESCTT---SCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHH
T ss_pred EEEEEEEecCC---CCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccchhhHHHhhhhc
Confidence 99999999865 799999999986543 246778888865 69999999999999986543322 345677888
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh--hhccc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG--LADTW 192 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 192 (323)
.++++++..+ +++++||||||.+++.+|.++|++ |+++|++++............ ......... .....
T Consensus 91 ~~~i~~~~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 161 (281)
T d1c4xa_ 91 LGLMNHFGIE------KSHIVGNSMGGAVTLQLVVEAPER-FDKVALMGSVGAPMNARPPEL--ARLLAFYADPRLTPYR 161 (281)
T ss_dssp HHHHHHHTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSSCCSSCCHHH--HHHHTGGGSCCHHHHH
T ss_pred cccccccccc------cceecccccccccccccccccccc-ccceEEeccccCccccchhHH--HHHHHhhhhcccchhh
Confidence 8888887644 899999999999999999999999 999999998654433322211 111111000 00000
Q ss_pred ccCCcccccccccCChH--HHHHHhcCCCCcCCCCchhHHHH-HHHHH-------HHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 193 AAMPDNKMVGKAIKDPE--KLKVIASNPRRYTGKPRVGTMRE-IARVC-------QYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
................. ......... ......... ..... ......+.++++|+|+|+|++|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 236 (281)
T d1c4xa_ 162 ELIHSFVYDPENFPGMEEIVKSRFEVAN-----DPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIV 236 (281)
T ss_dssp HHHHTTSSCSTTCTTHHHHHHHHHHHHH-----CHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhhhhhcccccccchhhhHHHHHhhhcc-----cchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCc
Confidence 00000000000000000 000000000 000000000 00000 0011235778999999999999999
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|++..+.+.+.+ +++++++++++||++++++|++ +.+.|.+||+
T Consensus 237 ~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~Fl~ 280 (281)
T d1c4xa_ 237 PLDTSLYLTKHL--KHAELVVLDRCGHWAQLERWDA----MGPMLMEHFR 280 (281)
T ss_dssp CTHHHHHHHHHC--SSEEEEEESSCCSCHHHHSHHH----HHHHHHHHHH
T ss_pred CHHHHHHHHHHC--CCCEEEEECCCCCchHHhCHHH----HHHHHHHHhC
Confidence 999999999998 7899999999999999766554 9999999986
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.8e-35 Score=227.65 Aligned_cols=252 Identities=14% Similarity=0.161 Sum_probs=158.2
Q ss_pred CCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHH
Q 020633 38 PNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLS 116 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 116 (323)
.++ +|+|...|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... ..+++++++|+.+
T Consensus 10 ~~~v~i~y~~~G~-----G~~ivllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl~~ 82 (277)
T d1brta_ 10 STSIDLYYEDHGT-----GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTT-GYDYDTFAADLNT 82 (277)
T ss_dssp TEEEEEEEEEECS-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHHHH
T ss_pred CCcEEEEEEEEcc-----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCCCCccccccc-ccchhhhhhhhhh
Confidence 344 888988874 468999999998887 89999999998999999999999999986543 3589999999999
Q ss_pred HHHHHHhcCCCCCCCeEEEEechhH-HHHHHHhhhcCCCceeEEEEccCcccCCCCCc-------hhhHHHHHhhhhh--
Q 020633 117 FFKHVRDSEPYRDLPGFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-------PSKLHLFMYGLLF-- 186 (323)
Q Consensus 117 ~l~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~-------~~~~~~~~~~~~~-- 186 (323)
+++++..+ +++++|||||| .++..++..+|++ |+++|++++......... .............
T Consensus 83 ~l~~l~~~------~~~lvGhS~G~~~~~~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
T d1brta_ 83 VLETLDLQ------DAVLVGFSTGTGEVARYVSSYGTAR-IAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKAD 155 (277)
T ss_dssp HHHHHTCC------SEEEEEEGGGHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHC
T ss_pred hhhccCcc------cccccccccchhhhhHHHHHhhhcc-cceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhcc
Confidence 99999754 89999999996 5566667778998 999999987543222111 0001111110000
Q ss_pred --hhhccc-cc-CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 187 --GLADTW-AA-MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 187 --~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
...... .. ......................... ...............+....+.++++|+++++|++|.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~ 231 (277)
T d1brta_ 156 RYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS----GGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTL 231 (277)
T ss_dssp HHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHH----SCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSS
T ss_pred chhhhhhccccccccchhhhhhhhHHHhhhhhcccch----hhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCc
Confidence 000000 00 0000000000000000000000000 000000000000000122446778999999999999999
Q ss_pred CchhH-HHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 263 CPTSS-KLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 263 ~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+.. +.+.+.+ +++++++++++||++++++| +++.+.|.+||++
T Consensus 232 ~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fL~k 277 (277)
T d1brta_ 232 PIENTARVFHKAL--PSAEYVEVEGAPHGLLWTHA----EEVNTALLAFLAK 277 (277)
T ss_dssp CGGGTHHHHHHHC--TTSEEEEETTCCTTHHHHTH----HHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHCc
Confidence 98765 5566666 78999999999999996555 4599999999974
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1e-34 Score=225.28 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=163.5
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
+|++.|| +|+|..+|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.... .++++++++
T Consensus 2 ~f~~~dG~~i~y~~~G~-----g~pvvllHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 74 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWGS-----GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-GNDMDTYAD 74 (273)
T ss_dssp EEECTTSCEEEEEEESC-----SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS-CCSHHHHHH
T ss_pred EEEeeCCcEEEEEEECC-----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEechhcCccccccc-cccccchHH
Confidence 5788999 999999874 468999999999888 89999999988999999999999999986544 358999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHH-hhhcCCCceeEEEEccCcccCCCCCc------hhhHHHHHhhh-
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLM-YFQSEPNTWTGLIFSAPLFVIPENMK------PSKLHLFMYGL- 184 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~-a~~~p~~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~~- 184 (323)
|+.++++++... +.+++|||+||.++..+ +..+|++ |++++++++......... ...........
T Consensus 75 ~~~~~l~~l~~~------~~~lvg~s~gG~~~~~~~a~~~p~~-v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T d1a8sa_ 75 DLAQLIEHLDLR------DAVLFGFSTGGGEVARYIGRHGTAR-VAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQAS 147 (273)
T ss_dssp HHHHHHHHTTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHhcCcc------ceeeeeeccCCccchhhhhhhhhhc-cceeEEEecccccccccccccccchhhhhhhHHHHH
Confidence 999999998644 78999999988665555 5556888 999999887543221111 00001000000
Q ss_pred h---hhhhcccccCCccccc-ccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCC
Q 020633 185 L---FGLADTWAAMPDNKMV-GKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 185 ~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~ 258 (323)
. ................ ................... .............. +....++++++|+++|+|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~ 223 (273)
T d1a8sa_ 148 LADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMA----AGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDA 223 (273)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHH----SCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETT
T ss_pred HHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcc----cchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCC
Confidence 0 0000000000000000 0000111111100000000 00011111111111 12345678899999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|.++|.+....+.+.+. +++++++++++||++++++|+ ++++.|.+||+
T Consensus 224 D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 224 DQVVPIEASGIASAALV-KGSTLKIYSGAPHGLTDTHKD----QLNADLLAFIK 272 (273)
T ss_dssp CSSSCSTTTHHHHHHHS-TTCEEEEETTCCSCHHHHTHH----HHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHH----HHHHHHHHHcC
Confidence 99999988777765542 678999999999999966554 49999999986
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=3.7e-34 Score=223.92 Aligned_cols=248 Identities=13% Similarity=0.039 Sum_probs=166.5
Q ss_pred cceeEEEcCCC-cEEEEEecCCCC--CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-cCCCCCcccCC
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQ--KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-GRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~ 105 (323)
..++.+++.|| +|+++.+.|.+. +++++||++||++++.. .|..+++.|+++||+|+++|+||| |.|++.... .
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~-~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~-~ 81 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDE-F 81 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------C-C
T ss_pred eeeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccC-C
Confidence 35788999999 999999987642 45689999999998877 899999999999999999999998 888765433 4
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLL 185 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 185 (323)
++..+.+|+.++++++.... ..+++|+||||||.+++.+|... . ++++|+.+|...... ......
T Consensus 82 ~~~~~~~dl~~vi~~l~~~~---~~~i~lvG~SmGG~ial~~A~~~--~-v~~li~~~g~~~~~~------~~~~~~--- 146 (302)
T d1thta_ 82 TMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISDL--E-LSFLITAVGVVNLRD------TLEKAL--- 146 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTTS--C-CSEEEEESCCSCHHH------HHHHHH---
T ss_pred CHHHHHHHHHHHHHhhhccC---CceeEEEEEchHHHHHHHHhccc--c-cceeEeecccccHHH------HHHHHH---
Confidence 78889999999999998763 45899999999999999988643 3 889999887654211 111111
Q ss_pred hhhhcccccCCc-cccccccc---CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 186 FGLADTWAAMPD-NKMVGKAI---KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 186 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
............ ........ .............. ......+.+.++++|+|+++|++|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~i~~PvLii~G~~D~~ 210 (302)
T d1thta_ 147 GFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWD----------------TLDSTLDKVANTSVPLIAFTANNDDW 210 (302)
T ss_dssp SSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCS----------------SHHHHHHHHTTCCSCEEEEEETTCTT
T ss_pred hhccchhhhhhccccccccccchhhHHHHHHHHHhHHH----------------HHHHHHHHHhhcCCCEEEEEeCCCCc
Confidence 100000000000 00000000 00011111111111 01113455678999999999999999
Q ss_pred cCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 262 TCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
+|++.++++++.+.++++++++++|++|.+. +++ .....+.+.+.+++-
T Consensus 211 V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~-~~~~~~~~~~~~~~~ 259 (302)
T d1thta_ 211 VKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENL-VVLRNFYQSVTKAAI 259 (302)
T ss_dssp SCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSH-HHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCCceEEEecCCCcccc-cCh-HHHHHHHHHHHHHHh
Confidence 9999999999999777899999999999987 444 334445555555543
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=4.6e-35 Score=228.59 Aligned_cols=250 Identities=14% Similarity=0.138 Sum_probs=161.5
Q ss_pred CC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHH---HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcH
Q 020633 39 NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKIC---ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 39 ~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
++ +|+|...|. +|+|||+||++++.. .|..+. ..+.++||+|+++|+||||.|........+...+++|+
T Consensus 18 ~~~~i~y~~~G~-----G~~ivllHG~~~~~~-~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i 91 (283)
T d2rhwa1 18 SDFNIHYNEAGN-----GETVIMLHGGGPGAG-GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91 (283)
T ss_dssp EEEEEEEEEECC-----SSEEEEECCCSTTCC-HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHH
T ss_pred CCEEEEEEEEcC-----CCeEEEECCCCCChh-HHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhc
Confidence 44 789988874 479999999998776 665543 34557899999999999999987655545677788999
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch--hhHHHHHhhhhhhhhcc-
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP--SKLHLFMYGLLFGLADT- 191 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 191 (323)
.++++++..+ +++++||||||.+++.+|.++|++ |+++|+++|.......... .................
T Consensus 92 ~~li~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (283)
T d2rhwa1 92 KGLMDALDID------RAHLVGNAMGGATALNFALEYPDR-IGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYET 164 (283)
T ss_dssp HHHHHHHTCC------CEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHH
T ss_pred cccccccccc------ccccccccchHHHHHHHHHHhhhh-cceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhh
Confidence 9999998754 899999999999999999999998 9999999976543322211 11111111111000000
Q ss_pred cccCCcccccccccCChH-HHHHHhcCCCCcCCCCchhHHHHHHHHH-------HHHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 192 WAAMPDNKMVGKAIKDPE-KLKVIASNPRRYTGKPRVGTMREIARVC-------QYIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
.................. .......... ............ .+....+.++++|+++++|++|.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 238 (283)
T d2rhwa1 165 LKQMLQVFLYDQSLITEELLQGRWEAIQR------QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP 238 (283)
T ss_dssp HHHHHHHHCSCGGGCCHHHHHHHHHHHHH------CHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHhhcccccCcHHHHHHHHHHhhh------hhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcC
Confidence 000000000000000111 0000000000 000000000000 01234567889999999999999999
Q ss_pred chhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.++.+.+.+ +++++++++++||++++++| +++.+.|.+||++
T Consensus 239 ~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 239 LDHGLKLLWNI--DDARLHVFSKCGHWAQWEHA----DEFNRLVIDFLRH 282 (283)
T ss_dssp THHHHHHHHHS--SSEEEEEESSCCSCHHHHTH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHhC
Confidence 99999999998 78999999999999996555 4599999999975
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=8.1e-35 Score=226.63 Aligned_cols=252 Identities=15% Similarity=0.133 Sum_probs=157.8
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHH
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKH 120 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 120 (323)
+|+|..+|. +|+|||+||+++++. .|..++..|.++||+|+++|+||||.|+.... .++++++++|+.+++++
T Consensus 14 ~i~y~~~G~-----g~~illlHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~di~~~i~~ 86 (279)
T d1hkha_ 14 ELYYEDQGS-----GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNT-GYDYDTFAADLHTVLET 86 (279)
T ss_dssp EEEEEEESS-----SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHHHHHHHH
T ss_pred EEEEEEEcc-----CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEechhhCCcccccc-ccchhhhhhhhhhhhhh
Confidence 788988874 478999999998877 89999998988899999999999999986544 35899999999999999
Q ss_pred HHhcCCCCCCCeEEEEechhH-HHHHHHhhhcCCCceeEEEEccCcccCCCCCch------hhHHHHHhhhhh----hhh
Q 020633 121 VRDSEPYRDLPGFLFGESMGG-AATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP------SKLHLFMYGLLF----GLA 189 (323)
Q Consensus 121 l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~------~~~~~~~~~~~~----~~~ 189 (323)
+..+ +++|+|||||| .++..++..+|++ |++++++++.......... ............ ...
T Consensus 87 l~~~------~~~lvGhS~Gg~~~a~~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (279)
T d1hkha_ 87 LDLR------DVVLVGFSMGTGELARYVARYGHER-VAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWF 159 (279)
T ss_dssp HTCC------SEEEEEETHHHHHHHHHHHHHCSTT-EEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred cCcC------ccccccccccccchhhhhccccccc-cceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhh
Confidence 8744 89999999996 5666667778998 9999998865432221110 000000000000 000
Q ss_pred cc-ccc-CCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-
Q 020633 190 DT-WAA-MPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS- 266 (323)
Q Consensus 190 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~- 266 (323)
.. ... ........................... ...................+.++.+++|+++++|++|.+++.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 238 (279)
T d1hkha_ 160 TDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSA-PVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDAT 238 (279)
T ss_dssp HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSC-TTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTT
T ss_pred hhhhhhhcccchhhhhhhhhhhhhhhhhhhcccc-hhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHH
Confidence 00 000 000000001111111111111000000 00000000000000011223345678999999999999998764
Q ss_pred HHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 267 SKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.+.+.+.+ +++++++++++||++++++|+ ++.+.|.+||++
T Consensus 239 ~~~~~~~~--p~~~~~~i~~~gH~~~~e~p~----~v~~~i~~fl~k 279 (279)
T d1hkha_ 239 ARRFHQAV--PEADYVEVEGAPHGLLWTHAD----EVNAALKTFLAK 279 (279)
T ss_dssp HHHHHHHC--TTSEEEEETTCCTTHHHHTHH----HHHHHHHHHHHC
T ss_pred HHHHHHhC--CCCEEEEECCCCCchHHhCHH----HHHHHHHHHHCc
Confidence 56777777 789999999999999966554 499999999974
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=4.6e-34 Score=221.24 Aligned_cols=255 Identities=15% Similarity=0.210 Sum_probs=163.7
Q ss_pred EEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhh
Q 020633 34 YFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 34 ~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 112 (323)
.|.+.|| +|+|..+|. +|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+..... .+++.+++
T Consensus 2 ~f~~~dG~~l~y~~~G~-----g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~ 74 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWGS-----GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG-NDYDTFAD 74 (271)
T ss_dssp EEECTTSCEEEEEEESS-----SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC-CSHHHHHH
T ss_pred EEEeECCeEEEEEEEcC-----CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccc-cccccccc
Confidence 5678899 999999875 357999999998887 899999999989999999999999999865443 58999999
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHH-HHhhhcCCCceeEEEEccCcccCCCCCch------hhHHHHHhh--
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATM-LMYFQSEPNTWTGLIFSAPLFVIPENMKP------SKLHLFMYG-- 183 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~-~~a~~~p~~~v~~~vl~~~~~~~~~~~~~------~~~~~~~~~-- 183 (323)
|+.++++++..+ +++++|||+||.+++ .++..+|++ +.+++++++.......... .........
T Consensus 75 ~~~~~~~~~~~~------~~~~vg~s~gG~~~~~~~a~~~p~~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (271)
T d1va4a_ 75 DIAQLIEHLDLK------EVTLVGFSMGGGDVARYIARHGSAR-VAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTEL 147 (271)
T ss_dssp HHHHHHHHHTCC------SEEEEEETTHHHHHHHHHHHHCSTT-EEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH
T ss_pred cceeeeeecCCC------cceeeccccccccccccccccccce-eeEEEeecccccccccchhhhhhhhhhHHHHHHHHh
Confidence 999999998744 899999999887655 456667888 9999998876543221110 000000000
Q ss_pred --hhhhhhcccccCCcccccccccCChHHH-HHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCC
Q 020633 184 --LLFGLADTWAAMPDNKMVGKAIKDPEKL-KVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~ 258 (323)
........+...... ............ ....... ............... +....+.++++|+++++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 221 (271)
T d1va4a_ 148 LKDRAQFISDFNAPFYG-INKGQVVSQGVQTQTLQIAL-----LASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDG 221 (271)
T ss_dssp HHHHHHHHHHHHHHHHT-GGGTCCCCHHHHHHHHHHHH-----HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETT
T ss_pred hhhhhhhhhhhcchhhc-ccchhhhhhhHHHHHHhhhh-----hhhhhhhhhcccccchhhhhhhhhhcccceeecccCC
Confidence 000000000000000 000000001000 0000000 000111111111111 11234567899999999999
Q ss_pred CcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 259 DGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
|.++|.+.+.++.+.+. +++++++++++||++++++| +++.+.|.+||++
T Consensus 222 D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fL~k 271 (271)
T d1va4a_ 222 DQIVPFETTGKVAAELI-KGAELKVYKDAPHGFAVTHA----QQLNEDLLAFLKR 271 (271)
T ss_dssp CSSSCGGGTHHHHHHHS-TTCEEEEETTCCTTHHHHTH----HHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCH----HHHHHHHHHHHCc
Confidence 99999988877654432 67899999999999996555 4599999999863
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=1.2e-33 Score=223.72 Aligned_cols=265 Identities=15% Similarity=0.085 Sum_probs=165.3
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC-cccCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI-RCYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-~~~~~~ 106 (323)
++++.++.+.|| +|+|..+|+++ +++|||+||++++.. .|......+ ..+|+|+++|+||||.|+.. ....++
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~---g~pvvllHG~~g~~~-~~~~~~~~l-~~~~~Vi~~D~rG~G~S~~~~~~~~~~ 84 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPH---GKPVVMLHGGPGGGC-NDKMRRFHD-PAKYRIVLFDQRGSGRSTPHADLVDNT 84 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT---SEEEEEECSTTTTCC-CGGGGGGSC-TTTEEEEEECCTTSTTSBSTTCCTTCC
T ss_pred CCCCCEEEeCCCcEEEEEEecCCC---CCEEEEECCCCCCcc-chHHHhHHh-hcCCEEEEEeccccCCCCccccccchh
Confidence 458889999999 99999999754 688999999987655 555443333 56799999999999999853 333457
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh---HHHHHhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK---LHLFMYG 183 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~---~~~~~~~ 183 (323)
++++++|+.++++++..+ +++|+||||||.+++.+|.++|++ |++++++++............ .......
T Consensus 85 ~~~~~~dl~~~~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
T d1azwa_ 85 TWDLVADIERLRTHLGVD------RWQVFGGSWGSTLALAYAQTHPQQ-VTELVLRGIFLLRRFELEWFYQEGASRLFPD 157 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCCCHHHHHHHHTSSHHHHCHH
T ss_pred HHHHHHHHHHHHHhhccc------cceeEEecCCcHHHHHHHHHhhhc-eeeeeEeccccccccchhhhhhcccchhhhH
Confidence 899999999999999855 899999999999999999999999 999999987654321100000 0000000
Q ss_pred hhhhhhcccccCCccc----cccc-ccCChHH-------HHHHhcCCCCcCCCCchh-------HHHHHHHHH-------
Q 020633 184 LLFGLADTWAAMPDNK----MVGK-AIKDPEK-------LKVIASNPRRYTGKPRVG-------TMREIARVC------- 237 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~----~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~------- 237 (323)
....+........... .... ....... .................. .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
T d1azwa_ 158 AWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNG 237 (313)
T ss_dssp HHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhc
Confidence 0000000000000000 0000 0000000 000000000111000000 000000000
Q ss_pred -------HHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHH
Q 020633 238 -------QYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREW 310 (323)
Q Consensus 238 -------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 310 (323)
.......+.+++|+++|+|++|.++|++.++.+.+.+ +++++++++++||+++ +| +..+++.+.+.+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~--p~a~~~~i~~aGH~~~--ep-~~~~~li~a~~~f 312 (313)
T d1azwa_ 238 GFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW--PKAQLQISPASGHSAF--EP-ENVDALVRATDGF 312 (313)
T ss_dssp GGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC--TTSEEEEETTCCSSTT--SH-HHHHHHHHHHHHH
T ss_pred cccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCCCC--Cc-hHHHHHHHHHHHh
Confidence 0022345667899999999999999999999999999 8899999999999875 23 4455666666665
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2e-34 Score=221.29 Aligned_cols=244 Identities=13% Similarity=0.018 Sum_probs=159.3
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||+++++. .|..+++.|+++||+|+++|+||||.|+.......++++++.|+..+++.... ..++++
T Consensus 2 G~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l 75 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSA-----DEKVIL 75 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCS-----SSCEEE
T ss_pred CCcEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccc-----cccccc
Confidence 479999999998877 89999999999999999999999999987666666888888888888876654 347999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh---hhcc-cccCCcccccccccCChHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG---LADT-WAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~ 210 (323)
+|||+||.+++.++.++|++ ++++|++++............ .......... .... ...................
T Consensus 76 vghS~Gg~va~~~a~~~p~~-~~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T d1xkla_ 76 VGHSLGGMNLGLAMEKYPQK-IYAAVFLAAFMPDSVHNSSFV-LEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKF 153 (258)
T ss_dssp EEETTHHHHHHHHHHHCGGG-EEEEEEESCCCCCSSSCTTHH-HHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHH
T ss_pred cccchhHHHHHHHhhhhccc-cceEEEecccCCCcccchHHH-HHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHH
Confidence 99999999999999999999 999999987654333222111 1111111000 0000 0000000001111111111
Q ss_pred HHHHhcCCCCcC--------CCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEE
Q 020633 211 LKVIASNPRRYT--------GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIK 282 (323)
Q Consensus 211 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
............ ..........+ ........+..+++|+++|+|++|.++|++..+.+.+.+ ++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~ 229 (258)
T d1xkla_ 154 LAHKLYQLCSPEDLALASSLVRPSSLFMEDL--SKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI--GVTEAI 229 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHH--HHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH--CCSEEE
T ss_pred HHHHhhhcccHHHHHHhhhhhhhhhhhhhhh--hhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC--CCCEEE
Confidence 110000000000 00000000000 000012345567899999999999999999999999998 789999
Q ss_pred EecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 283 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++++||++++++|++ +.+.|.+|++++
T Consensus 230 ~i~~~gH~~~~e~P~~----~~~~l~e~~~k~ 257 (258)
T d1xkla_ 230 EIKGADHMAMLCEPQK----LCASLLEIAHKY 257 (258)
T ss_dssp EETTCCSCHHHHSHHH----HHHHHHHHHHHC
T ss_pred EECCCCCchHHhCHHH----HHHHHHHHHHhc
Confidence 9999999999777765 888888888764
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=1.9e-33 Score=220.36 Aligned_cols=253 Identities=11% Similarity=0.072 Sum_probs=159.2
Q ss_pred cceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc---cCCC
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC---YLGD 106 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~ 106 (323)
.+..++...+.+|+|...|. +|+|||+||+++++. .|..+++.|++ +|+|+++|+||||.|..... ...+
T Consensus 8 ~~~~~~~~~~~~l~y~~~G~-----gp~vv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~ 80 (293)
T d1ehya_ 8 FKHYEVQLPDVKIHYVREGA-----GPTLLLLHGWPGFWW-EWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLNDLSKYS 80 (293)
T ss_dssp SCEEEEECSSCEEEEEEEEC-----SSEEEEECCSSCCGG-GGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTCGGGGC
T ss_pred CcceEEEECCEEEEEEEECC-----CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEecCCcccCCcccccccccccc
Confidence 34455555434999998874 579999999998887 89999999976 69999999999999974332 2347
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh------HHHH
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK------LHLF 180 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~------~~~~ 180 (323)
++++++|+.++++++..+ +++++||||||.+|+.++.++|++ +.++|++++............ ....
T Consensus 81 ~~~~a~~~~~~~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (293)
T d1ehya_ 81 LDKAADDQAALLDALGIE------KAYVVGHDFAAIVLHKFIRKYSDR-VIKAAIFDPIQPDFGPVYFGLGHVHESWYSQ 153 (293)
T ss_dssp HHHHHHHHHHHHHHTTCC------CEEEEEETHHHHHHHHHHHHTGGG-EEEEEEECCSCTTC-----------CCHHHH
T ss_pred chhhhhHHHhhhhhcCcc------ccccccccccccchhcccccCccc-cceeeeeeccCccccchhhhhhhhhhhhhhh
Confidence 889999999999988744 899999999999999999999999 999999987643211110000 0000
Q ss_pred Hhh-----------------hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH----
Q 020633 181 MYG-----------------LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY---- 239 (323)
Q Consensus 181 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (323)
... .+......+.. ................. ..................
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 223 (293)
T d1ehya_ 154 FHQLDMAVEVVGSSREVCKKYFKHFFDHWSY------RDELLTEEELEVHVDNC----MKPDNIHGGFNYYRANIRPDAA 223 (293)
T ss_dssp HTTCHHHHHHHTSCHHHHHHHHHHHHHHTSS------SSCCSCHHHHHHHHHHH----TSTTHHHHHHHHHHHHSSSSCC
T ss_pred hhccchhhhhhccchhHHHHHHHHhhhhccc------ccccccHHHHHhhhhcc----ccchhhhhhhhhhhhccccchh
Confidence 000 00000000000 00000000000000000 000000000111100000
Q ss_pred --HHhcCCCCCcCEEEEeeCCCcccCchhHHHH-HHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 240 --IQDNFSKVTVPFLTVHGTADGVTCPTSSKLL-YEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 240 --~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.......+++|+++|+|++|.++|.+...+. .+.. +++++++++++||++++|+|++ +.+.|.+||+
T Consensus 224 ~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~Pe~----~~~~I~~Ffr 293 (293)
T d1ehya_ 224 LWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYY--SNYTMETIEDCGHFLMVEKPEI----AIDRIKTAFR 293 (293)
T ss_dssp CCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHB--SSEEEEEETTCCSCHHHHCHHH----HHHHHHHHCC
T ss_pred hhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhC--CCCEEEEECCCCCchHHHCHHH----HHHHHHHhhC
Confidence 0011245789999999999999998776554 4455 7899999999999999766655 8888988873
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-34 Score=221.38 Aligned_cols=242 Identities=15% Similarity=0.187 Sum_probs=150.0
Q ss_pred EEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 42 LFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 42 l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
|+|...|.+ +++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.... .++.+++ +.+..+
T Consensus 2 i~y~~~G~g----~~~lvllHG~~~~~~-~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~--~~~~d~~----~~~~~~ 69 (256)
T d1m33a_ 2 IWWQTKGQG----NVHLVLLHGWGLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGFGA--LSLADMA----EAVLQQ 69 (256)
T ss_dssp CCEEEECCC----SSEEEEECCTTCCGG-GGGGTHHHHHT-TSEEEEECCTTSTTCCSCCC--CCHHHHH----HHHHTT
T ss_pred eEEEEECCC----CCeEEEECCCCCCHH-HHHHHHHHHhC-CCEEEEEeCCCCCCcccccc--ccccccc----cccccc
Confidence 567777643 578999999998887 89999999975 69999999999999975432 2443332 222222
Q ss_pred HhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch----hhHHHHHhhhhh----hhhcccc
Q 020633 122 RDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP----SKLHLFMYGLLF----GLADTWA 193 (323)
Q Consensus 122 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~ 193 (323)
. ..+++++||||||.+++.+|.++|+. +++++++++.......... ..........+. .....+.
T Consensus 70 ~------~~~~~l~GhS~Gg~ia~~~a~~~p~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T d1m33a_ 70 A------PDKAIWLGWSLGGLVASQIALTHPER-VRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFL 142 (256)
T ss_dssp S------CSSEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c------ccceeeeecccchHHHHHHHHhCCcc-cceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHh
Confidence 2 44899999999999999999999998 9999998765433221111 111111111111 0000000
Q ss_pred cCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH--HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHH
Q 020633 194 AMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ--YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
.. ................. .... ................. +....++++++|+++|+|++|.++|.+.++.+.
T Consensus 143 ~~---~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~ 217 (256)
T d1m33a_ 143 AL---QTMGTETARQDARALKK-TVLA-LPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLD 217 (256)
T ss_dssp HT---TSTTSTTHHHHHHHHHH-HHHT-SCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CT
T ss_pred hh---hhccccchhhHHHHHHH-hhhh-cchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHH
Confidence 00 00000000000011111 0000 11111122222222221 134567789999999999999999999988888
Q ss_pred HHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 272 EKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 272 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+ +++++++++++||++++++|++ +.+.|.+||++
T Consensus 218 ~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~l~~fl~~ 253 (256)
T d1m33a_ 218 KLW--PHSESYIFAKAAHAPFISHPAE----FCHLLVALKQR 253 (256)
T ss_dssp TTC--TTCEEEEETTCCSCHHHHSHHH----HHHHHHHHHTT
T ss_pred HHC--CCCEEEEECCCCCchHHHCHHH----HHHHHHHHHHH
Confidence 877 7899999999999999766655 99999999875
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=6.5e-34 Score=218.41 Aligned_cols=241 Identities=13% Similarity=0.094 Sum_probs=154.9
Q ss_pred EEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEE
Q 020633 57 TVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFG 136 (323)
Q Consensus 57 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 136 (323)
-.|||||++++.. .|..+++.|.++||+|+++|+||||.|+.+....++++++++++.++++.+.. ..+++|+|
T Consensus 4 ~~vliHG~~~~~~-~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~lvG 77 (256)
T d3c70a1 4 HFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP-----GEKVILVG 77 (256)
T ss_dssp EEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCT-----TCCEEEEE
T ss_pred cEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhcc-----ccceeecc
Confidence 3589999998766 89999999999999999999999999987666667899999999999877643 34899999
Q ss_pred echhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhc--ccccC-CcccccccccCChHHHHH
Q 020633 137 ESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLAD--TWAAM-PDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 137 ~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 213 (323)
|||||.+++.++..+|++ |+++|++++............ ............. ..... ..................
T Consensus 78 hS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T d3c70a1 78 ESCGGLNIAIAADKYCEK-IAAAVFHNSVLPDTEHCPSYV-VDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLREN 155 (256)
T ss_dssp ETTHHHHHHHHHHHHGGG-EEEEEEESCCCCCSSSCTTHH-HHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred cchHHHHHHHHhhcCchh-hhhhheeccccCCcccchhhH-hhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhh
Confidence 999999999999999998 999999987654333222211 1111111110000 00000 000000000000000000
Q ss_pred HhcCCCCcC-------CCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecC
Q 020633 214 IASNPRRYT-------GKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDG 286 (323)
Q Consensus 214 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
......... .... ........ ..........+++|+++|+|++|..+|++..+.+.+.+ ++.+++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~ 231 (256)
T d3c70a1 156 LYTLCGPEEYELAKMLTRKG-SLFQNILA-KRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY--KPDKVYKVEG 231 (256)
T ss_dssp TSTTSCHHHHHHHHHHCCCB-CCCHHHHT-TSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS--CCSEEEECCS
T ss_pred hhhhcchhhHHHhhhhhhhh-hHHHhhhh-hcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHC--CCCEEEEECC
Confidence 000000000 0000 00000000 00011223446899999999999999999999999988 7899999999
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 287 MYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+||++++++|++ +.+.|.+|+++
T Consensus 232 agH~~~~e~P~~----~~~~l~~~~~~ 254 (256)
T d3c70a1 232 GDHKLQLTKTKE----IAEILQEVADT 254 (256)
T ss_dssp CCSCHHHHSHHH----HHHHHHHHHHH
T ss_pred CCCchHHhCHHH----HHHHHHHHHHh
Confidence 999999877766 77888888765
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=7.1e-32 Score=215.85 Aligned_cols=244 Identities=14% Similarity=0.066 Sum_probs=167.9
Q ss_pred cCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC
Q 020633 26 QGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
...+.+++.++. +| +|.++.+.|.+.++.|+||++||++++.. .+..++..|+++||.|+++|+||+|.|.......
T Consensus 102 ~~~~~e~v~ip~-dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e-~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~ 179 (360)
T d2jbwa1 102 LSPPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIA 179 (360)
T ss_dssp SSSCEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC
T ss_pred CCCCeEEeecCc-CCcccceEEEecCCCCCceEEEEeCCCCccHH-HHHHHHHHHHhcCCEEEEEccccccccCcccccc
Confidence 345567777776 56 99999999987678899999999988876 5667889999999999999999999997654433
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
.+.+..+ ..+++++.....++..+|+|+||||||.+++.+|...|. |+++|.+++....................
T Consensus 180 ~~~~~~~---~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pr--i~a~V~~~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T d2jbwa1 180 GDYEKYT---SAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR--LAACISWGGFSDLDYWDLETPLTKESWKY 254 (360)
T ss_dssp SCHHHHH---HHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT--CCEEEEESCCSCSTTGGGSCHHHHHHHHH
T ss_pred ccHHHHH---HHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCC--cceEEEEcccccHHHHhhhhhhhhHHHHH
Confidence 3454444 445555555444445689999999999999999998875 99999998876543211110000000000
Q ss_pred hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
... ....................+.+|++|+|+++|++|. +|.
T Consensus 255 ~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~ 297 (360)
T d2jbwa1 255 VSK------------------------------------VDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPL 297 (360)
T ss_dssp HTT------------------------------------CSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCT
T ss_pred hcc------------------------------------CCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCH
Confidence 000 0000000000000000234567899999999999998 689
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
+.++.+++.+..++.+++++++++|... +.+. +....|.+||.+++...
T Consensus 298 ~~~~~l~~~~~~~~~~l~~~~~g~H~~~-~~~~----~~~~~i~dWl~~~L~~g 346 (360)
T d2jbwa1 298 SFVDTVLELVPAEHLNLVVEKDGDHCCH-NLGI----RPRLEMADWLYDVLVAG 346 (360)
T ss_dssp HHHHHHHHHSCGGGEEEEEETTCCGGGG-GGTT----HHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHhcCCCCeEEEEECCCCcCCC-cChH----HHHHHHHHHHHHHhccC
Confidence 9999999998655677888899999765 3333 37788999999998643
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=1.9e-32 Score=222.33 Aligned_cols=283 Identities=12% Similarity=0.090 Sum_probs=168.6
Q ss_pred cccccccCcccceeEEEcCCC-cEEEEEec--C---CCCCcceEEEEecCCCCCccccH------HHHHHHHhhCCcEEE
Q 020633 20 EEYYTSQGVRNGKKYFETPNG-KLFTQSFL--P---LDQKVKATVYMTHGYGSDTGWMF------QKICISFATWGYAVF 87 (323)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~--~---~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~v~ 87 (323)
.+.....+.+.|++++++.|| .|...... + .+.+++|+|||+||+++++. .| ..++..|+++||+|+
T Consensus 17 ~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~-~~~~~~~~~sla~~L~~~Gy~V~ 95 (377)
T d1k8qa_ 17 SQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGYDVW 95 (377)
T ss_dssp HHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchh-HHhhcCccchHHHHHHHCCCEEE
Confidence 344445678889999999999 77665432 2 12356899999999998876 55 348899999999999
Q ss_pred EecCCCCcCCCCCccc--------CCChHHH-hhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeE
Q 020633 88 AADLLGHGRSDGIRCY--------LGDMEKV-AASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTG 158 (323)
Q Consensus 88 ~~d~~G~G~s~~~~~~--------~~~~~~~-~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~ 158 (323)
++|+||||.|+..... ..+++++ ..|+.++++++....+ ..+++++||||||.+++.+|..+|+. +++
T Consensus 96 ~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g--~~~v~lvGhS~GG~ia~~~a~~~p~~-~~~ 172 (377)
T d1k8qa_ 96 LGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG--QDKLHYVGHSQGTTIGFIAFSTNPKL-AKR 172 (377)
T ss_dssp ECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHHCHHH-HTT
T ss_pred EEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcC--CCCEEEEEecchHHHHHHHHHhhhhh-hhh
Confidence 9999999999743221 2245554 3677788877766544 56899999999999999999999987 776
Q ss_pred EEEccCcccC---CCCCchhhHHHHHhhhhhhhhccc-ccCCc-------------ccc---------------cccccC
Q 020633 159 LIFSAPLFVI---PENMKPSKLHLFMYGLLFGLADTW-AAMPD-------------NKM---------------VGKAIK 206 (323)
Q Consensus 159 ~vl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~---------------~~~~~~ 206 (323)
++++...... ........................ ..... ... ......
T Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (377)
T d1k8qa_ 173 IKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLN 252 (377)
T ss_dssp EEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSC
T ss_pred ceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCccccc
Confidence 6664432221 111110000000000000000000 00000 000 000000
Q ss_pred ChHHHHHHhcCCCCcCCCCchhHHHHHHHHH-----------------H------HHHhcCCCCCcCEEEEeeCCCcccC
Q 020633 207 DPEKLKVIASNPRRYTGKPRVGTMREIARVC-----------------Q------YIQDNFSKVTVPFLTVHGTADGVTC 263 (323)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~------~~~~~~~~~~~P~l~i~g~~D~~~~ 263 (323)
............. .........+.... . .....++++++|+|+|+|++|.+++
T Consensus 253 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~ 328 (377)
T d1k8qa_ 253 MSRLDVYLSHNPA----GTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLAD 328 (377)
T ss_dssp GGGHHHHHTTCCC----CEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSC
T ss_pred HHHhhhhhhcccc----cchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccC
Confidence 0000000000000 00001111111000 0 0112467889999999999999999
Q ss_pred chhHHHHHHHcCCCC-ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 264 PTSSKLLYEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 264 ~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
++.++.+.+.+ ++ .+.++++++||+.++-. .+..++++..|.+||++
T Consensus 329 ~~~~~~l~~~l--p~~~~~~~i~~~GH~d~~~~-~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 329 PHDVDLLLSKL--PNLIYHRKIPPYNHLDFIWA-MDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHHHHHTTC--TTEEEEEEETTCCTTHHHHC-TTHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHHHC--CCCeEEEEeCCCCCcchhhc-cchHHHHHHHHHHHHhc
Confidence 99999999988 55 47888999999844222 35677899999999974
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.98 E-value=2.6e-31 Score=201.80 Aligned_cols=229 Identities=13% Similarity=0.214 Sum_probs=152.2
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
+++|||+||++++.. .|..+++.|+++||+|+++|+||||.|...... ....+...++..++..+.... ..++++
T Consensus 11 ~~~vvliHG~~~~~~-~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~l 85 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVH-TGPDDWWQDVMNGYEFLKNKG---YEKIAV 85 (242)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTT-CCHHHHHHHHHHHHHHHHHHT---CCCEEE
T ss_pred CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccc-cchhHHHHHHHHHHhhhhhcc---cCceEE
Confidence 568999999998887 899999999999999999999999998644332 355666666666666555442 458999
Q ss_pred EEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVI 214 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (323)
+|||+||.+++.++.++|.. .++++++........ ................... .........
T Consensus 86 ~G~S~Gg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 148 (242)
T d1tqha_ 86 AGLSLGGVFSLKLGYTVPIE---GIVTMCAPMYIKSEE---TMYEGVLEYAREYKKREGK-----------SEEQIEQEM 148 (242)
T ss_dssp EEETHHHHHHHHHHTTSCCS---CEEEESCCSSCCCHH---HHHHHHHHHHHHHHHHHTC-----------CHHHHHHHH
T ss_pred EEcchHHHHhhhhcccCccc---ccccccccccccchh---HHHHHHHHHHHHHhhhccc-----------hhhhHHHHH
Confidence 99999999999999998864 345555443332211 1111111111111100000 000000000
Q ss_pred hcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccC
Q 020633 215 ASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQG 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (323)
..... ...................+..+++|+|+++|++|..+|++.++.+.+.+.++++++++++++||+++++
T Consensus 149 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 223 (242)
T d1tqha_ 149 EKFKQ-----TPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLD 223 (242)
T ss_dssp HHHTT-----SCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGS
T ss_pred hhhhh-----hccchhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccc
Confidence 00000 0111122222222334567788999999999999999999999999999877789999999999999864
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 020633 295 EPDENANLVLKDMREWIDE 313 (323)
Q Consensus 295 ~~~~~~~~~~~~i~~fl~~ 313 (323)
+..+++.+.|.+||++
T Consensus 224 ---~~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 224 ---QEKDQLHEDIYAFLES 239 (242)
T ss_dssp ---TTHHHHHHHHHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHh
Confidence 3356699999999976
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.97 E-value=2.8e-31 Score=208.13 Aligned_cols=264 Identities=12% Similarity=0.071 Sum_probs=155.8
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC---C
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL---G 105 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~ 105 (323)
+.+..+...+| +|+|..+|. +|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+...... .
T Consensus 7 ~~~~~fi~~~g~~i~y~~~G~-----g~~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~ 79 (298)
T d1mj5a_ 7 FGEKKFIEIKGRRMAYIDEGT-----GDPILFQHGNPTSSY-LWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERY 79 (298)
T ss_dssp SSCCEEEEETTEEEEEEEESC-----SSEEEEECCTTCCGG-GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSS
T ss_pred CCCCEEEEECCEEEEEEEEcC-----CCcEEEECCCCCCHH-HHHHHHHHHhcC-CEEEEEeCCCCCCCCCCcccccccc
Confidence 34445555588 999999874 468999999998877 899999999765 999999999999998644321 1
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHH----H
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLF----M 181 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~----~ 181 (323)
......+++..++..... ..+++++||||||.+++.++.++|++ |++++++++................ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~-----~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (298)
T d1mj5a_ 80 AYAEHRDYLDALWEALDL-----GDRVVLVVHDWGSALGFDWARRHRER-VQGIAYMEAIAMPIEWADFPEQDRDLFQAF 153 (298)
T ss_dssp CHHHHHHHHHHHHHHTTC-----TTCEEEEEEHHHHHHHHHHHHHTGGG-EEEEEEEEECCSCBCGGGSCGGGHHHHHHH
T ss_pred ccchhhhhhccccccccc-----cccCeEEEecccchhHHHHHHHHHhh-hheeeccccccccccchhhhhhhhhhhhhh
Confidence 233444444444433322 44899999999999999999999999 9999998766543322111110000 0
Q ss_pred hhhhhhhhcc----cccCCcccccccccCChHHHHHHhcCCCCc----------CCCCchhHHHHHHHHHHHHHhcCCCC
Q 020633 182 YGLLFGLADT----WAAMPDNKMVGKAIKDPEKLKVIASNPRRY----------TGKPRVGTMREIARVCQYIQDNFSKV 247 (323)
Q Consensus 182 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (323)
.......... .............................. ......................+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T d1mj5a_ 154 RSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSES 233 (298)
T ss_dssp HSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTC
T ss_pred hhhhhhhhhhhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhc
Confidence 0000000000 000000000000000000000000000000 00000000111112222234566788
Q ss_pred CcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 248 TVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 248 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++|+++++|++|.+.+ ...+.+.+.+ ++.++++++ +||++++++|++ +.+.|.+||++.
T Consensus 234 ~~P~l~i~g~~d~~~~-~~~~~~~~~~--p~~~~~~~~-~GH~~~~e~P~~----v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 234 PIPKLFINAEPGALTT-GRMRDFCRTW--PNQTEITVA-GAHFIQEDSPDE----IGAAIAAFVRRL 292 (298)
T ss_dssp CSCEEEEEEEECSSSS-HHHHHHHTTC--SSEEEEEEE-ESSCGGGTCHHH----HHHHHHHHHHHH
T ss_pred ceeEEEEecCCCCcCh-HHHHHHHHHC--CCCEEEEeC-CCCchHHhCHHH----HHHHHHHHHhhh
Confidence 9999999999997664 5567777776 677776664 699999776655 999999999886
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=3e-31 Score=209.31 Aligned_cols=127 Identities=13% Similarity=0.072 Sum_probs=107.4
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-ccCCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-CYLGD 106 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~ 106 (323)
++++.++.+.|| +|+|..+|+++ +|+|||+||+++++. .|..+...|+ +||+|+++|+||||.|+... ...++
T Consensus 10 p~~~~~v~~~dG~~i~y~~~G~~~---g~pvvllHG~~~~~~-~w~~~~~~l~-~~~~vi~~D~rG~G~S~~~~~~~~~~ 84 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELSGNPN---GKPAVFIHGGPGGGI-SPHHRQLFDP-ERYKVLLFDQRGCGRSRPHASLDNNT 84 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTT---SEEEEEECCTTTCCC-CGGGGGGSCT-TTEEEEEECCTTSTTCBSTTCCTTCS
T ss_pred CCcCCEEEeCCCcEEEEEEecCCC---CCeEEEECCCCCccc-chHHHHHHhh-cCCEEEEEeCCCcccccccccccccc
Confidence 446778899999 99999999865 678999999998877 7887776665 47999999999999997533 33457
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
...+.+|+..+++.+... +++++|||+||.+++.+|..+|++ |++++++++...
T Consensus 85 ~~~~~~d~~~~~~~~~~~------~~~~vg~s~g~~~~~~~a~~~~~~-v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 85 TWHLVADIERLREMAGVE------QWLVFGGSWGSTLALAYAQTHPER-VSEMVLRGIFTL 138 (313)
T ss_dssp HHHHHHHHHHHHHHTTCS------SEEEEEETHHHHHHHHHHHHCGGG-EEEEEEESCCCC
T ss_pred hhhHHHHHHhhhhccCCC------cceeEeeecCCchhhHHHHHHhhh-heeeeecccccc
Confidence 888899999999988754 899999999999999999999998 999999887543
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.97 E-value=1.5e-30 Score=190.98 Aligned_cols=202 Identities=16% Similarity=0.087 Sum_probs=154.9
Q ss_pred ceeEEEcCCCcEEEEEecCCC--CCcceEEEEecCC---CCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccC
Q 020633 31 GKKYFETPNGKLFTQSFLPLD--QKVKATVYMTHGY---GSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYL 104 (323)
Q Consensus 31 ~~~~~~~~~g~l~~~~~~~~~--~~~~~~vv~~HG~---~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 104 (323)
+..++..++|+|......|.. ..+.+++|++|+. |++.. ..+..+++.|+++||.|+.+|+||+|.|.+...
T Consensus 9 ~~l~i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~-- 86 (218)
T d2fuka1 9 AALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD-- 86 (218)
T ss_dssp EEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC--
T ss_pred eEEEEeCCCccEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccC--
Confidence 446777788888777776643 2345677888854 23221 146778999999999999999999999987543
Q ss_pred CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhh
Q 020633 105 GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGL 184 (323)
Q Consensus 105 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 184 (323)
+.....+|+.++++++..+.+ ..+++++||||||.+++.+|.+.+ ++++|+++|+.....
T Consensus 87 -~~~~~~~D~~a~~~~~~~~~~--~~~v~l~G~S~Gg~va~~~a~~~~---~~~lil~ap~~~~~~-------------- 146 (218)
T d2fuka1 87 -HGDGEQDDLRAVAEWVRAQRP--TDTLWLAGFSFGAYVSLRAAAALE---PQVLISIAPPAGRWD-------------- 146 (218)
T ss_dssp -TTTHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHHHC---CSEEEEESCCBTTBC--------------
T ss_pred -cCcchHHHHHHHHHHHhhccc--CceEEEEEEcccchhhhhhhcccc---cceEEEeCCcccchh--------------
Confidence 456778999999999988765 678999999999999999888743 789999998643100
Q ss_pred hhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCc
Q 020633 185 LFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCP 264 (323)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 264 (323)
....++.+|+|+|+|++|.++|+
T Consensus 147 ---------------------------------------------------------~~~~~~~~P~Lvi~G~~D~~vp~ 169 (218)
T d2fuka1 147 ---------------------------------------------------------FSDVQPPAQWLVIQGDADEIVDP 169 (218)
T ss_dssp ---------------------------------------------------------CTTCCCCSSEEEEEETTCSSSCH
T ss_pred ---------------------------------------------------------hhccccccceeeEecCCCcCcCH
Confidence 00123468999999999999999
Q ss_pred hhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 265 TSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
+.++++.+.+. ...++++++|++|++. . ..+++.+.+.+|+++++..
T Consensus 170 ~~~~~l~~~~~-~~~~l~~i~ga~H~f~----~-~~~~l~~~~~~~v~~~l~~ 216 (218)
T d2fuka1 170 QAVYDWLETLE-QQPTLVRMPDTSHFFH----R-KLIDLRGALQHGVRRWLPA 216 (218)
T ss_dssp HHHHHHHTTCS-SCCEEEEETTCCTTCT----T-CHHHHHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHcc-CCceEEEeCCCCCCCC----C-CHHHHHHHHHHHHHHhcCC
Confidence 99999988774 3578999999999765 2 2345889999999988754
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=3.3e-31 Score=203.83 Aligned_cols=237 Identities=15% Similarity=0.078 Sum_probs=131.7
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+.+|+|||+||++++.. .|..+++.|++.||+|+++|+||||.|...............+ .+... ... ...++
T Consensus 14 ~~~P~ivllHG~~~~~~-~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~--~~~~~--~~~--~~~~~ 86 (264)
T d1r3da_ 14 ARTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIE--QTVQA--HVT--SEVPV 86 (264)
T ss_dssp TTBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHH--HHHHT--TCC--TTSEE
T ss_pred CCCCeEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhh--hcccc--ccc--ccCce
Confidence 45789999999998877 8999999999889999999999999997654432222221111 11111 111 14589
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH--hhhhhhhhc-----ccccCCccccccccc
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM--YGLLFGLAD-----TWAAMPDNKMVGKAI 205 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~ 205 (323)
+++||||||.+++.++.++|+. +.+++++.+................. ......... ...............
T Consensus 87 ~lvGhS~Gg~ia~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T d1r3da_ 87 ILVGYSLGGRLIMHGLAQGAFS-RLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSL 165 (264)
T ss_dssp EEEEETHHHHHHHHHHHHTTTT-TSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTC
T ss_pred eeeeecchHHHHHHHHHhCchh-ccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence 9999999999999999999998 77777765443332222221111000 000000000 000000000000000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH-----HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCcc
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ-----YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKS 280 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 280 (323)
............... ............. .....+..+++|+++++|++|..+ ..+.+. ++++
T Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~---~~~~ 232 (264)
T d1r3da_ 166 NHEQRQTLIAQRSAN-----LGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES---SGLS 232 (264)
T ss_dssp CHHHHHHHHHHHTTS-----CHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH---HCSE
T ss_pred chHHHHHHHHHHhhh-----hhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc---CCCe
Confidence 111111111111000 0000000000000 012335678999999999999653 233333 5789
Q ss_pred EEEecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 281 IKIYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 281 ~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+++++++||++++++|++ +.+.|.+||++.
T Consensus 233 ~~~i~~~gH~~~~e~P~~----~~~~i~~fl~~l 262 (264)
T d1r3da_ 233 YSQVAQAGHNVHHEQPQA----FAKIVQAMIHSI 262 (264)
T ss_dssp EEEETTCCSCHHHHCHHH----HHHHHHHHHHHH
T ss_pred EEEECCCCCchHHHCHHH----HHHHHHHHHHhc
Confidence 999999999999766655 999999999875
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=3.5e-29 Score=198.30 Aligned_cols=247 Identities=17% Similarity=0.150 Sum_probs=170.2
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 103 (323)
..++..+++.+++.|| +|+++.+.|.+.++.|+||++||++++.. .|...+..|+++||.|+++|+||+|.|.+....
T Consensus 51 ~~~~~~~~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~-~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~ 129 (318)
T d1l7aa_ 51 ADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDTSIS 129 (318)
T ss_dssp CSSEEEEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCC
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCcc-chHHHHHHHHHCCCEEEEEeeCCCCCCCCCccc
Confidence 3456667788999999 99999999987778899999999998877 788889999999999999999999999754321
Q ss_pred C-----------------CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 104 L-----------------GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 104 ~-----------------~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
. ......+.|....++.+.....++..++.++|+|+||..++..+...+. +++++...+..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~--~~~~~~~~~~~ 207 (318)
T d1l7aa_ 130 PHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI--PKAAVADYPYL 207 (318)
T ss_dssp SSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC--CSEEEEESCCS
T ss_pred chhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc--cceEEEecccc
Confidence 1 0123345677777777777655556689999999999999999998876 77777666543
Q ss_pred cCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHH--HHHHhcC
Q 020633 167 VIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVC--QYIQDNF 244 (323)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 244 (323)
... ......... . .............. ........... ......+
T Consensus 208 ~~~---------~~~~~~~~~-------~----------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 254 (318)
T d1l7aa_ 208 SNF---------ERAIDVALE-------Q----------PYLEINSFFRRNGS-------PETEVQAMKTLSYFDIMNLA 254 (318)
T ss_dssp CCH---------HHHHHHCCS-------T----------TTTHHHHHHHHSCC-------HHHHHHHHHHHHTTCHHHHG
T ss_pred ccH---------HHHhhcccc-------c----------ccchhhhhhhcccc-------cccccccccccccccccccc
Confidence 210 000000000 0 00000000000000 00000000000 0123446
Q ss_pred CCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 245 SKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 245 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++++|+|+++|++|.++|++.+..+++++. .++++++++++||... ++ ..+.+.+||+++++
T Consensus 255 ~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~-~~~~l~~~~~~gH~~~----~~----~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 255 DRVKVPVLMSIGLIDKVTPPSTVFAAYNHLE-TKKELKVYRYFGHEYI----PA----FQTEKLAFFKQILK 317 (318)
T ss_dssp GGCCSCEEEEEETTCSSSCHHHHHHHHHHCC-SSEEEEEETTCCSSCC----HH----HHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEEECCCCCcCHHHHHHHHHHcC-CCcEEEEECCCCCCCc----HH----HHHHHHHHHHHhCC
Confidence 7889999999999999999999999999985 3689999999999765 44 67788899999875
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=1.9e-29 Score=205.01 Aligned_cols=128 Identities=11% Similarity=0.029 Sum_probs=109.6
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCC------cEEEEecCCCCcCCCCCc-c
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWG------YAVFAADLLGHGRSDGIR-C 102 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g------~~v~~~d~~G~G~s~~~~-~ 102 (323)
-.++.+..+| +|||...+..+ ...++|||+||++++.. .|..++..|++.| |+||++|+||||.|+.+. .
T Consensus 82 ~~~f~~~i~G~~iHf~h~~~~~-~~~~pLlLlHG~P~s~~-~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~ 159 (394)
T d1qo7a_ 82 FPQFTTEIEGLTIHFAALFSER-EDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLD 159 (394)
T ss_dssp SCEEEEEETTEEEEEEEECCSC-TTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSS
T ss_pred CCCeEEEECCEEEEEEEEeccC-CCCCEEEEeccccccHH-HHHHHHHhhccccCCcccceeeecccccccCCCCCCCCC
Confidence 4466677799 99998776654 56789999999999887 9999999999887 999999999999998654 3
Q ss_pred cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 103 YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
..++...+++++..+++.+... +.+++|||+||.++..++..+|+. +.+++++.....
T Consensus 160 ~~y~~~~~a~~~~~l~~~lg~~------~~~~vg~~~Gg~v~~~~a~~~p~~-~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 160 KDFGLMDNARVVDQLMKDLGFG------SGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNLCAMR 217 (394)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCT------TCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCCCCC
T ss_pred CccCHHHHHHHHHHHHhhccCc------ceEEEEecCchhHHHHHHHHhhcc-ccceeEeeeccc
Confidence 4568999999999999998754 789999999999999999999998 888888765543
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.96 E-value=4.6e-28 Score=185.87 Aligned_cols=242 Identities=16% Similarity=0.089 Sum_probs=169.0
Q ss_pred cccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCC-ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc--
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSD-TGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC-- 102 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 102 (323)
.+.+.+++++.|| +|.++++.|.+. ++.|+||++||++.. ....|..++..|+++||.|+++|+||++.+.....
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~ 89 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 89 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHT
T ss_pred CceEEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccc
Confidence 4456778999999 999999998763 567899999985432 22366778888999999999999999977653211
Q ss_pred -cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHH
Q 020633 103 -YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFM 181 (323)
Q Consensus 103 -~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 181 (323)
.........+|+.++++++..... ..++.++|+|+||.+++.++..+|+. +++++..++.......
T Consensus 90 ~~~~~~~~~~~D~~~~~~~l~~~~~--~~~~~i~g~s~gg~~~~~~~~~~~~~-~~a~i~~~~~~~~~~~---------- 156 (260)
T d2hu7a2 90 IIGDPCGGELEDVSAAARWARESGL--ASELYIMGYSYGGYMTLCALTMKPGL-FKAGVAGASVVDWEEM---------- 156 (260)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTC--EEEEEEEEETHHHHHHHHHHHHSTTS-SSEEEEESCCCCHHHH----------
T ss_pred cccccchhhhhhhcccccccccccc--cceeeccccccccccccchhccCCcc-cccccccccchhhhhh----------
Confidence 111223446788888988887643 56899999999999999999999998 9999998886542110
Q ss_pred hhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcc
Q 020633 182 YGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGV 261 (323)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 261 (323)
.......... ......... .+..... .....+.++++|+|+++|++|..
T Consensus 157 ~~~~~~~~~~-----------------~~~~~~~~~-------------~~~~~~~-~~~~~~~~~~~P~liihG~~D~~ 205 (260)
T d2hu7a2 157 YELSDAAFRN-----------------FIEQLTGGS-------------REIMRSR-SPINHVDRIKEPLALIHPQNDSR 205 (260)
T ss_dssp HHTCCHHHHH-----------------HHHHHHCSC-------------HHHHHHT-CGGGCGGGCCSCEEEEEETTCSS
T ss_pred hccccccccc-----------------ccccccccc-------------ccccccc-chhhcccccCCCceeeecccCce
Confidence 0000000000 000000000 0000000 02345678899999999999999
Q ss_pred cCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 262 TCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 262 ~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+|.+.+..+++.+. +..+++++++++||.+. ..+...++.+.+.+||.++++
T Consensus 206 vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 206 TPLKPLLRLMGELLARGKTFEAHIIPDAGHAIN---TMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---BHHHHHHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCC---ChHhHHHHHHHHHHHHHHHhc
Confidence 99999999988763 34568999999999875 245667788899999999986
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.3e-28 Score=186.89 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=89.4
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
.+||||+||++++.. .|..+.+.|.+. ||+|+++|+||||.|..+.. ++++.+++++.++++.+. .++
T Consensus 2 ~~PvvllHG~~~~~~-~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~--~~~~~~~~~l~~~l~~l~-------~~~ 71 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAVVPIMAKAP-------QGV 71 (268)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHHHHHHHHCT-------TCE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccc--cCHHHHHHHHHHHHhccC-------CeE
Confidence 567899999998887 899999999874 79999999999999986544 378899999999998875 289
Q ss_pred EEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 133 FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+|+||||||.+|+.+|.++|+.+|+++|+++++..
T Consensus 72 ~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 72 HLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp EEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred EEEccccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999999999999844999999987543
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=4.7e-26 Score=174.46 Aligned_cols=243 Identities=15% Similarity=0.061 Sum_probs=159.8
Q ss_pred cccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCC----CccccHHHHHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 28 VRNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGS----DTGWMFQKICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~----~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
++.+++.+...+| +|.|.++.|++ .++.|+||++||+++ ...+.+......++++||.|+.+|+||.+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~ 80 (258)
T d2bgra2 1 MPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD 80 (258)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred CCceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcch
Confidence 4568889999999 99999999975 234589999999521 222233344556778899999999999875541
Q ss_pred Cc--ccCCCh-HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh
Q 020633 100 IR--CYLGDM-EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK 176 (323)
Q Consensus 100 ~~--~~~~~~-~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~ 176 (323)
.. ....++ ....+++.++++++.....++..++.++|+|+||.+++.++..+|+. +...+..++.......... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 158 (258)
T d2bgra2 81 KIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGV-FKCGIAVAPVSRWEYYDSV-Y 158 (258)
T ss_dssp HHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSC-CSEEEEESCCCCGGGSBHH-H
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCc-ceEEEEeeccccccccccc-c
Confidence 10 000011 22346677888888877666667899999999999999999999987 7766666654332111000 0
Q ss_pred HHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCC-CcCEEEEe
Q 020633 177 LHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKV-TVPFLTVH 255 (323)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~ 255 (323)
. ... . .. . ............. ....+.++ ++|+|+++
T Consensus 159 ~-~~~-------~-~~---------~--~~~~~~~~~~~~~----------------------~~~~~~~~~~~P~li~h 196 (258)
T d2bgra2 159 T-ERY-------M-GL---------P--TPEDNLDHYRNST----------------------VMSRAENFKQVEYLLIH 196 (258)
T ss_dssp H-HHH-------H-CC---------C--STTTTHHHHHHSC----------------------SGGGGGGGGGSEEEEEE
T ss_pred c-chh-------c-cc---------c--cchhhHHHhhccc----------------------ccccccccccCChheee
Confidence 0 000 0 00 0 0000000000000 11223333 47999999
Q ss_pred eCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 256 GTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|++|..+|++.+.++++.+. +.+++++++++++|.+. ..+..+.+.+.+.+||+++++.
T Consensus 197 G~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 197 GTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIA---SSTAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCC---SHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---CCccHHHHHHHHHHHHHHHhcC
Confidence 99999999999999888763 35689999999999865 2455677899999999998753
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.94 E-value=6.2e-26 Score=179.72 Aligned_cols=246 Identities=14% Similarity=0.113 Sum_probs=159.2
Q ss_pred ccCcccceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc
Q 020633 25 SQGVRNGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC 102 (323)
Q Consensus 25 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 102 (323)
..++..+++.+.+.|| +|+++.+.|.+ .++.|+||++||++.+.. .+. ....++++||.|+++|+||+|.|.....
T Consensus 50 ~~~~~~~~v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~-~~~-~~~~~a~~G~~v~~~D~rG~G~s~~~~~ 127 (322)
T d1vlqa_ 50 LKTVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPH-DWLFWPSMGYICFVMDTRGQGSGWLKGD 127 (322)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGG-GGCHHHHTTCEEEEECCTTCCCSSSCCC
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcC-cHH-HHHHHHhCCCEEEEeeccccCCCCCCcc
Confidence 3445667788899999 99999999865 356789999999987655 343 3346788999999999999999864321
Q ss_pred cC------------------------CChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeE
Q 020633 103 YL------------------------GDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTG 158 (323)
Q Consensus 103 ~~------------------------~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~ 158 (323)
.. ......+.|+..+++.+......+..++.++|+|+||.+++.++...+. +++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~~--~~a 205 (322)
T d1vlqa_ 128 TPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK--AKA 205 (322)
T ss_dssp CCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS--CCE
T ss_pred ccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCCC--ccE
Confidence 10 0112345677788888887765556789999999999999988887665 888
Q ss_pred EEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHH
Q 020633 159 LIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQ 238 (323)
Q Consensus 159 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (323)
++...+....... ....... . .............. ............
T Consensus 206 ~v~~~~~~~~~~~---------~~~~~~~-------~----------~~~~~~~~~~~~~~------~~~~~~~~~~~~- 252 (322)
T d1vlqa_ 206 LLCDVPFLCHFRR---------AVQLVDT-------H----------PYAEITNFLKTHRD------KEEIVFRTLSYF- 252 (322)
T ss_dssp EEEESCCSCCHHH---------HHHHCCC-------T----------THHHHHHHHHHCTT------CHHHHHHHHHTT-
T ss_pred EEEeCCccccHHH---------HHhhccc-------c----------chhhHHhhhhcCcc------hhhhHHHHhhhh-
Confidence 8877665431100 0000000 0 00000000000000 000000000000
Q ss_pred HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 239 YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 239 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+....+.++++|+|+++|++|.++|++.+..++++++. .++++++++++|... .. ...+...+||++.+
T Consensus 253 d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~p~~~H~~~----~~---~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 253 DGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGG----GS---FQAVEQVKFLKKLF 321 (322)
T ss_dssp CHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTT----HH---HHHHHHHHHHHHHH
T ss_pred hHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CeEEEEECCCCCCCc----cc---cCHHHHHHHHHHHh
Confidence 12334567899999999999999999999999998853 588999999999654 22 12344568888876
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.94 E-value=2.2e-26 Score=167.44 Aligned_cols=183 Identities=13% Similarity=0.107 Sum_probs=123.8
Q ss_pred eEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 56 ATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 56 ~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
..||++||++++.. ..+..+++.|+++||.|+++|+||+|.+ ..+++++.+...++ .. ..+++|
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~--------~~~~~~~~l~~~~~---~~----~~~~~l 66 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP--------RLEDWLDTLSLYQH---TL----HENTYL 66 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC--------CHHHHHHHHHTTGG---GC----CTTEEE
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc--------hHHHHHHHHHHHHh---cc----CCCcEE
Confidence 47999999998753 1367889999999999999999999865 34555444443332 11 558999
Q ss_pred EEechhHHHHHHHhhhcCCCc-eeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHH
Q 020633 135 FGESMGGAATMLMYFQSEPNT-WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV 213 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~p~~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (323)
+||||||.+++.++.+++... +.+++..+++......... .. .... . ..
T Consensus 67 vGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~------------~~~~-~-~~------ 116 (186)
T d1uxoa_ 67 VAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM----------LD------------EFTQ-G-SF------ 116 (186)
T ss_dssp EEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG----------GG------------GGTC-S-CC------
T ss_pred EEechhhHHHHHHHHhCCccceeeEEeecccccccchhhhh----------hh------------hhhc-c-cc------
Confidence 999999999999999988641 4445455543322111000 00 0000 0 00
Q ss_pred HhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCccccc
Q 020633 214 IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
. .....++.+|+++|+|++|.++|++.++.+++.+ ++++++++++||+..
T Consensus 117 ------------~--------------~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~---~~~~~~~~~~gH~~~- 166 (186)
T d1uxoa_ 117 ------------D--------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFLE- 166 (186)
T ss_dssp ------------C--------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSCG-
T ss_pred ------------c--------------ccccccCCCCEEEEecCCCCCCCHHHHHHHHHHc---CCEEEEeCCCCCcCc-
Confidence 0 0111234689999999999999999999999887 578999999999776
Q ss_pred CCCchhHHHHHHHHHHHHHH
Q 020633 294 GEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 294 ~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.......++.+.|.+||.+
T Consensus 167 ~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 167 DEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp GGTCSCCHHHHHHHHHHHHC
T ss_pred cccCcccHHHHHHHHHHHcC
Confidence 22222334588888888863
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=2.1e-25 Score=168.88 Aligned_cols=215 Identities=19% Similarity=0.199 Sum_probs=132.4
Q ss_pred CCcEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCC---ChHHHhh---
Q 020633 39 NGKLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLG---DMEKVAA--- 112 (323)
Q Consensus 39 ~g~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~--- 112 (323)
.| +.+....|. +++|+||++||++++.. .|..+++.|+++||.|+++|+||||.|........ .......
T Consensus 11 ~g-~~~~~~~p~--~~~~~vl~lHG~~~~~~-~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 86 (238)
T d1ufoa_ 11 AG-LSVLARIPE--APKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVAL 86 (238)
T ss_dssp TT-EEEEEEEES--SCCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHH
T ss_pred CC-EEEEecCCC--CCCeEEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHH
Confidence 45 333334454 45799999999999887 78889999999999999999999999975432211 1122111
Q ss_pred -cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcc
Q 020633 113 -SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADT 191 (323)
Q Consensus 113 -d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (323)
++..+...+......+..++.++|+|+||.+++.++..+|. +++++.+.+..........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~--~~~~~~~~~~~~~~~~~~~----------------- 147 (238)
T d1ufoa_ 87 GFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR--PRGVLAFIGSGFPMKLPQG----------------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC--CSCEEEESCCSSCCCCCTT-----------------
T ss_pred hHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc--hhheeeeeeeccccccccc-----------------
Confidence 12222221111111124589999999999999999999887 5555544332221110000
Q ss_pred cccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHH
Q 020633 192 WAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
..............+. ........++|+|+++|++|.++|.+.+..++
T Consensus 148 -----------~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 195 (238)
T d1ufoa_ 148 -----------QVVEDPGVLALYQAPP---------------------ATRGEAYGGVPLLHLHGSRDHIVPLARMEKTL 195 (238)
T ss_dssp -----------CCCCCHHHHHHHHSCG---------------------GGCGGGGTTCCEEEEEETTCTTTTHHHHHHHH
T ss_pred -----------cccccccccchhhhhh---------------------hhhhhhhcCCCeEEEEcCCCCccCHHHHHHHH
Confidence 0000011111111111 01112334789999999999999999999998
Q ss_pred HHcCC----CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 272 EKASS----ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 272 ~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+.+.. .+.++++++|+||... .+ ..+.+.+||.+++.
T Consensus 196 ~~l~~~~~~~~~~~~~~~g~gH~~~----~~----~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 196 EALRPHYPEGRLARFVEEGAGHTLT----PL----MARVGLAFLEHWLE 236 (238)
T ss_dssp HHHGGGCTTCCEEEEEETTCCSSCC----HH----HHHHHHHHHHHHHH
T ss_pred HHHHhcCCCceEEEEEECCCCCccC----HH----HHHHHHHHHHHHhc
Confidence 87732 2457788899999876 34 45566667766654
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=1.2e-23 Score=155.80 Aligned_cols=205 Identities=17% Similarity=0.205 Sum_probs=156.7
Q ss_pred eeEEEcCCCcEEEEEecCCCCCcceEEEEecCC---CCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCCh
Q 020633 32 KKYFETPNGKLFTQSFLPLDQKVKATVYMTHGY---GSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDM 107 (323)
Q Consensus 32 ~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~---~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 107 (323)
++.|..++|+|......+.. .+.+++|++||. |++.. .....+++.|.+.||.|+.+|+||.|.|.+.... .
T Consensus 2 ev~i~g~~G~Le~~~~~~~~-~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~---~ 77 (218)
T d2i3da1 2 EVIFNGPAGRLEGRYQPSKE-KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH---G 77 (218)
T ss_dssp EEEEEETTEEEEEEEECCSS-TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS---S
T ss_pred cEEEeCCCccEEEEEeCCCC-CCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccccc---c
Confidence 35677888899887654443 567899999984 33322 1456688889999999999999999999876543 3
Q ss_pred HHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhh
Q 020633 108 EKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFG 187 (323)
Q Consensus 108 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (323)
....+|..++++++..... ...+++++|+|+||.+++.++.+.+. +.+++++.+......
T Consensus 78 ~~e~~d~~aa~~~~~~~~~-~~~~~~~~g~S~G~~~a~~~a~~~~~--~~~~~~~~~~~~~~~----------------- 137 (218)
T d2i3da1 78 AGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE--IEGFMSIAPQPNTYD----------------- 137 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT--EEEEEEESCCTTTSC-----------------
T ss_pred hhHHHHHHHHHhhhhcccc-cccceeEEeeehHHHHHHHHHHhhcc--ccceeeccccccccc-----------------
Confidence 4556888888888876643 13579999999999999999888766 788888877643211
Q ss_pred hhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH
Q 020633 188 LADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS 267 (323)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 267 (323)
...+....+|+++++|+.|.+++....
T Consensus 138 -----------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~ 164 (218)
T d2i3da1 138 -----------------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKDV 164 (218)
T ss_dssp -----------------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHH
T ss_pred -----------------------------------------------------hhhccccCCCceeeecccceecChHHH
Confidence 022344578999999999999999998
Q ss_pred HHHHHHcCC---CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 268 KLLYEKASS---ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 268 ~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
..+.+.+.. ...++++++|++|++. ...+++.+.+.+||++++...
T Consensus 165 ~~l~~~~~~~~~~~~~~~vi~gAdHfF~-----g~~~~l~~~v~~~l~~~l~~~ 213 (218)
T d2i3da1 165 NGLVEKLKTQKGILITHRTLPGANHFFN-----GKVDELMGECEDYLDRRLNGE 213 (218)
T ss_dssp HHHHHHHTTSTTCCEEEEEETTCCTTCT-----TCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhccCCCccEEEeCCCCCCCc-----CCHHHHHHHHHHHHHHhcCCC
Confidence 888877642 3458899999999886 234669999999999999754
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.93 E-value=3.4e-24 Score=160.89 Aligned_cols=209 Identities=15% Similarity=0.102 Sum_probs=152.6
Q ss_pred cceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCccc-----
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCY----- 103 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----- 103 (323)
.+.+.+++.|| ++..+...|.+ ++.|.||++|+..+... ....+++.|+++||.|+++|+.+.+........
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~~-~~~P~vl~~h~~~G~~~-~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~ 80 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPAK-APAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCSS-SSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCC-CCceEEEEeCCCCCCCH-HHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHH
Confidence 46678999999 99999999986 78999999997776655 567789999999999999999876554321110
Q ss_pred ---------CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 104 ---------LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 104 ---------~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
..+.+....|+...++++.... .+..+|.++|+|+||.+++.++... . +.+.+...+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~-~~~~~i~~~G~s~Gg~~a~~~a~~~-~--~~~~~~~~~~~~~~----- 151 (233)
T d1dina_ 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQP-YSNGKVGLVGYCLGGALAFLVAAKG-Y--VDRAVGYYGVGLEK----- 151 (233)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHTST-TEEEEEEEEEETHHHHHHHHHHHHT-C--SSEEEEESCSCGGG-----
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHhCC-CCCCceEEEEecccccceeeccccc-c--cceecccccccccc-----
Confidence 1245556788888888887653 2345899999999999999988763 3 45555433211000
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTV 254 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 254 (323)
..+...++++|+|++
T Consensus 152 -----------------------------------------------------------------~~~~~~~i~~Pvl~~ 166 (233)
T d1dina_ 152 -----------------------------------------------------------------QLNKVPEVKHPALFH 166 (233)
T ss_dssp -----------------------------------------------------------------GGGGGGGCCSCEEEE
T ss_pred -----------------------------------------------------------------chhhhhccCCcceee
Confidence 113345678999999
Q ss_pred eeCCCcccCchhHHHHHHHcC-CCCccEEEecCCCcccccCCCc----hhHHHHHHHHHHHHHHH
Q 020633 255 HGTADGVTCPTSSKLLYEKAS-SADKSIKIYDGMYHSLIQGEPD----ENANLVLKDMREWIDER 314 (323)
Q Consensus 255 ~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~ 314 (323)
+|++|..+|.+..+.+.+.+. +.+.++++++|++|.+.....+ ...++.++.+.+||.+.
T Consensus 167 ~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 167 MGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp EETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred ecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 999999999998888777653 3457899999999987643332 33455678888888643
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.92 E-value=6.9e-24 Score=161.68 Aligned_cols=185 Identities=17% Similarity=0.193 Sum_probs=138.9
Q ss_pred EEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHH
Q 020633 44 TQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHV 121 (323)
Q Consensus 44 ~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 121 (323)
+.+|.|.+ .++.|+||++||++++.. .+..+++.|+++||.|+++|++|++.. ......|+..+++++
T Consensus 39 ~~ly~P~~~~~g~~P~Vv~~HG~~g~~~-~~~~~a~~lA~~Gy~V~~~d~~~~~~~---------~~~~~~d~~~~~~~l 108 (260)
T d1jfra_ 39 GTIYYPTSTADGTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQ---------PDSRGRQLLSALDYL 108 (260)
T ss_dssp EEEEEESCCTTCCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCC---------HHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCccEEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeeCCCcCC---------chhhHHHHHHHHHHH
Confidence 44455543 245689999999998877 778899999999999999999987543 244556777777776
Q ss_pred HhcC----CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 122 RDSE----PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 122 ~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
.... .++..+|.++|||+||.+++.++...+. ++++|.+++....
T Consensus 109 ~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~~--~~A~v~~~~~~~~----------------------------- 157 (260)
T d1jfra_ 109 TQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS--LKAAIPLTGWNTD----------------------------- 157 (260)
T ss_dssp HHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT--CSEEEEESCCCSC-----------------------------
T ss_pred HhhhhhhccccccceEEEeccccchHHHHHHhhhcc--chhheeeeccccc-----------------------------
Confidence 6542 2445689999999999999999988776 8888888765321
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchh-HHHHHHHcC-
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTS-SKLLYEKAS- 275 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~- 275 (323)
..+.++++|+|+++|++|.++|++. .+.+++.+.
T Consensus 158 --------------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~ 193 (260)
T d1jfra_ 158 --------------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPG 193 (260)
T ss_dssp --------------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCT
T ss_pred --------------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhccc
Confidence 1234568999999999999999876 455566553
Q ss_pred CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 276 SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 276 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
....++++++|++|...- .....+.+.+..||+.++..
T Consensus 194 ~~~~~~~~i~ga~H~~~~----~~~~~~~~~~~~wl~~~L~~ 231 (260)
T d1jfra_ 194 SLDKAYLELRGASHFTPN----TSDTTIAKYSISWLKRFIDS 231 (260)
T ss_dssp TSCEEEEEETTCCTTGGG----SCCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEECCCccCCCC----CChHHHHHHHHHHHHHHhcC
Confidence 234578999999998872 22344778889999998764
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=7.2e-25 Score=167.76 Aligned_cols=231 Identities=15% Similarity=0.108 Sum_probs=146.7
Q ss_pred CCC-cEEEEEecCCC---CCcceEEEEecCCCCC----ccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc--ccCCC-
Q 020633 38 PNG-KLFTQSFLPLD---QKVKATVYMTHGYGSD----TGWMFQKICISFATWGYAVFAADLLGHGRSDGIR--CYLGD- 106 (323)
Q Consensus 38 ~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~~~- 106 (323)
.|| +|.++++.|.+ +++.|+||++||+++. ..+........|+++||.|+++|+||.+.+.... ....+
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~ 89 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 89 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccc
Confidence 488 99999999875 2445899999996321 2222233455788999999999999865332110 00001
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCC---ceeEEEEccCcccCCCCCchhhHHHHHhh
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPN---TWTGLIFSAPLFVIPENMKPSKLHLFMYG 183 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 183 (323)
.....+|+.++++++..+..++..++.++|+|+||.+++.++...++. .++..+...+........... .....
T Consensus 90 g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 166 (258)
T d1xfda2 90 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF--SERYL- 166 (258)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH--HHHHH-
T ss_pred hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccc--ccccc-
Confidence 123467888999999888777778999999999999999888775542 155555555543322111000 00000
Q ss_pred hhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCC-CCcCEEEEeeCCCccc
Q 020633 184 LLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSK-VTVPFLTVHGTADGVT 262 (323)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~ 262 (323)
. .... +...+.... ....+.+ .++|+|+++|+.|..+
T Consensus 167 ---~---~~~~----------------------~~~~~~~~s--------------~~~~~~~~~~~p~Li~hG~~D~~v 204 (258)
T d1xfda2 167 ---G---LHGL----------------------DNRAYEMTK--------------VAHRVSALEEQQFLIIHPTADEKI 204 (258)
T ss_dssp ---C---CCSS----------------------CCSSTTTTC--------------THHHHTSCCSCEEEEEEETTCSSS
T ss_pred ---c---cccc----------------------chHHhhccc--------------hhhhhhhhhcccccccccCCCCCc
Confidence 0 0000 000000000 0111122 3689999999999999
Q ss_pred CchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 263 CPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
|++.+.++.+.+. +.+.+++++++++|.+. .......+.+.+.+||+++++
T Consensus 205 p~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~---~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 205 HFQHTAELITQLIRGKANYSLQIYPDESHYFT---SSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEETTCCSSCC---CHHHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---CCcCHHHHHHHHHHHHHHhhC
Confidence 9999888877663 34678999999999875 234556688999999988764
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=3.8e-25 Score=159.00 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=125.6
Q ss_pred ceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEE
Q 020633 55 KATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFL 134 (323)
Q Consensus 55 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 134 (323)
.++|||+||++++.. .|..+++.|.++||.++.+|.+|++.+...... +.+.+.+++.++++.+. ..++++
T Consensus 2 ~~PVv~vHG~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~~~~l~~~i~~~~~~~~------~~~v~l 72 (179)
T d1ispa_ 2 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYN--NGPVLSRFVQKVLDETG------AKKVDI 72 (179)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHH--HHHHHHHHHHHHHHHHC------CSCEEE
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHHcCCeEEEEecCCccccccccch--hhhhHHHHHHHHHHhcC------CceEEE
Confidence 457899999998877 899999999999999999999999988654321 33444455555554443 448999
Q ss_pred EEechhHHHHHHHhhhc--CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHH
Q 020633 135 FGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLK 212 (323)
Q Consensus 135 ~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (323)
+||||||.++..++.++ +++ |+++|+++++....... .+
T Consensus 73 vGHSmGG~va~~~~~~~~~~~~-V~~~V~l~~p~~g~~~~--------------------------~l------------ 113 (179)
T d1ispa_ 73 VAHSMGGANTLYYIKNLDGGNK-VANVVTLGGANRLTTGK--------------------------AL------------ 113 (179)
T ss_dssp EEETHHHHHHHHHHHHSSGGGT-EEEEEEESCCGGGTCSB--------------------------CC------------
T ss_pred EeecCcCHHHHHHHHHcCCchh-hCEEEEECCCCCCchhh--------------------------hc------------
Confidence 99999999999999876 566 99999998754321100 00
Q ss_pred HHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcccc
Q 020633 213 VIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHSLI 292 (323)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (323)
........+|++.|+|..|.++++..+ .+ +..+.+.+++++|...
T Consensus 114 ----------------------------~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l--~~~~~~~~~~~~H~~l 158 (179)
T d1ispa_ 114 ----------------------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RL--DGARNVQIHGVGHIGL 158 (179)
T ss_dssp ----------------------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CC--BTSEEEEESSCCTGGG
T ss_pred ----------------------------CCcccccCceEEEEEecCCcccCchhh-----cC--CCceEEEECCCCchhh
Confidence 001122368999999999999987543 34 6778889999999887
Q ss_pred cCCCchhHHHHHHHHHHHHHH
Q 020633 293 QGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 293 ~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+| ++.+.|.+||+.
T Consensus 159 ~~~~-----~v~~~i~~~L~~ 174 (179)
T d1ispa_ 159 LYSS-----QVNSLIKEGLNG 174 (179)
T ss_dssp GGCH-----HHHHHHHHHHTT
T ss_pred ccCH-----HHHHHHHHHHhc
Confidence 5444 378888888853
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5.6e-24 Score=159.20 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=131.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCC--------------CCcccCC---ChHHHhhcHH
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSD--------------GIRCYLG---DMEKVAASSL 115 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~--------------~~~~~~~---~~~~~~~d~~ 115 (323)
+..++||++||+|++.. .|..+...+...++.+++++-|.+..+. ....... .+++..+.+.
T Consensus 19 ~~~~~VI~lHG~G~~~~-~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~ 97 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIK 97 (229)
T ss_dssp CCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH-HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHH
Confidence 55689999999998877 7777777787778999998865321110 0001111 1344455566
Q ss_pred HHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccC
Q 020633 116 SFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAM 195 (323)
Q Consensus 116 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (323)
.+++..... .++..+++++|+|+||.+|+.++.++|+. +++++.+++.........
T Consensus 98 ~li~~~~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~-~~gvi~~sg~lp~~~~~~---------------------- 153 (229)
T d1fj2a_ 98 ALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQK-LAGVTALSCWLPLRASFP---------------------- 153 (229)
T ss_dssp HHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHTTCSSC-CSEEEEESCCCTTGGGSC----------------------
T ss_pred HHhhhhhhc-CCCccceeeeecccchHHHHHHHHhhccc-cCcccccccccccccccc----------------------
Confidence 666655443 35577999999999999999999999998 999999887532110000
Q ss_pred CcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC
Q 020633 196 PDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS 275 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 275 (323)
.. .....+.++|++++||++|.++|.+.++...+.+.
T Consensus 154 ------~~-------------------------------------~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~ 190 (229)
T d1fj2a_ 154 ------QG-------------------------------------PIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLK 190 (229)
T ss_dssp ------SS-------------------------------------CCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred ------cc-------------------------------------ccccccccCceeEEEcCCCCeeCHHHHHHHHHHHH
Confidence 00 00112236899999999999999998887766552
Q ss_pred ----CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 276 ----SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 276 ----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
..++++++++++||... .+ ..+.+.+||++++.
T Consensus 191 ~~~~~~~v~~~~~~g~gH~i~----~~----~~~~~~~wL~~~Lp 227 (229)
T d1fj2a_ 191 TLVNPANVTFKTYEGMMHSSC----QQ----EMMDVKQFIDKLLP 227 (229)
T ss_dssp HHSCGGGEEEEEETTCCSSCC----HH----HHHHHHHHHHHHSC
T ss_pred hcCCCCceEEEEeCCCCCccC----HH----HHHHHHHHHHhHCc
Confidence 34678889999999776 33 56789999999873
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.91 E-value=3.9e-23 Score=152.07 Aligned_cols=188 Identities=14% Similarity=0.113 Sum_probs=137.8
Q ss_pred EecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCC---C--cccCCC---hHHHhhcHHHH
Q 020633 46 SFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDG---I--RCYLGD---MEKVAASSLSF 117 (323)
Q Consensus 46 ~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---~--~~~~~~---~~~~~~d~~~~ 117 (323)
++.|+..+++|+||++||++++.. .|..+++.+.+ ++.|++++.+..+.... . .....+ .....+++..+
T Consensus 5 i~~~~~~~~~P~vi~lHG~g~~~~-~~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (202)
T d2h1ia1 5 VFQKGKDTSKPVLLLLHGTGGNEL-DLLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEF 82 (202)
T ss_dssp EEECCSCTTSCEEEEECCTTCCTT-TTHHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCEEEEECCCCCCHH-HHHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHH
Confidence 355555567899999999998877 78888888875 69999987654433210 0 000112 23345567777
Q ss_pred HHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCc
Q 020633 118 FKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPD 197 (323)
Q Consensus 118 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
++.+.....++..+++++|+|+||.+++.++..+|+. +.++++.++......
T Consensus 83 i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~-~~~~~~~~~~~~~~~--------------------------- 134 (202)
T d2h1ia1 83 LDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENA-LKGAVLHHPMVPRRG--------------------------- 134 (202)
T ss_dssp HHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTS-CSEEEEESCCCSCSS---------------------------
T ss_pred HHHHHHhccccccceeeecccccchHHHHHHHhcccc-ccceeeecCCCCccc---------------------------
Confidence 7777777777788999999999999999999999998 999999887543210
Q ss_pred ccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCC
Q 020633 198 NKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSA 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 277 (323)
.........|+++++|++|.++|++.++++.+.+...
T Consensus 135 -------------------------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~ 171 (202)
T d2h1ia1 135 -------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENA 171 (202)
T ss_dssp -------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTT
T ss_pred -------------------------------------------ccccccccchhhcccccCCCccCHHHHHHHHHHHHHC
Confidence 0112334679999999999999999999998887533
Q ss_pred --CccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 278 --DKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 278 --~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
+++++.+++ ||.+. .+ ..+.+.+||++++
T Consensus 172 g~~~~~~~~~g-gH~~~----~~----~~~~~~~wl~k~f 202 (202)
T d2h1ia1 172 NANVTMHWENR-GHQLT----MG----EVEKAKEWYDKAF 202 (202)
T ss_dssp TCEEEEEEESS-TTSCC----HH----HHHHHHHHHHHHC
T ss_pred CCCEEEEEECC-CCcCC----HH----HHHHHHHHHHHhC
Confidence 467888886 89765 33 5778999998863
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.90 E-value=5.9e-23 Score=158.48 Aligned_cols=217 Identities=14% Similarity=0.119 Sum_probs=137.1
Q ss_pred CcceEEEEecCCC-CCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcc--cCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 53 KVKATVYMTHGYG-SDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRC--YLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 53 ~~~~~vv~~HG~~-~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
..++++||+||+. +...+.|..+++.|... +.|+++|+||||.|..... ...+++++++++.+.|..... .
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~-~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~-----~ 131 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEE-RDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG-----D 131 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTT-CCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT-----T
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCC-ceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcC-----C
Confidence 4578999999963 23334899999999765 9999999999998874332 224788888887665544332 3
Q ss_pred CCeEEEEechhHHHHHHHhhhc----CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCccccccccc
Q 020633 130 LPGFLFGESMGGAATMLMYFQS----EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAI 205 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~----p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (323)
.+++|+||||||.+|+.+|.+. +.. |.+++++++...........+. .... .....
T Consensus 132 ~P~vL~GhS~GG~vA~e~A~~l~~~~g~~-v~~LvL~d~~~~~~~~~~~~~~-~~~~----~~~~~-------------- 191 (283)
T d2h7xa1 132 APVVLLGHSGGALLAHELAFRLERAHGAP-PAGIVLVDPYPPGHQEPIEVWS-RQLG----EGLFA-------------- 191 (283)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCC-CSEEEEESCCCTTCCHHHHHTH-HHHH----HHHHH--------------
T ss_pred CceEEEEeccchHHHHHHHHhhHHHcCCC-ceEEEEecCCccccccchhhhh-hhhH----HHhhc--------------
Confidence 4899999999999999999864 455 9999999876543221111110 0000 00000
Q ss_pred CChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHH-HHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEe
Q 020633 206 KDPEKLKVIASNPRRYTGKPRVGTMREIARVCQY-IQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIY 284 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
..... ........+...... .......+++|+++|+|++|..++.+....+.+.+. ...+++.+
T Consensus 192 ----------~~~~~----~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~-~~~~~~~v 256 (283)
T d2h7xa1 192 ----------GELEP----MSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWD-LPHTVADV 256 (283)
T ss_dssp ----------TCSSC----CCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCS-SCSEEEEE
T ss_pred ----------ccccc----cccHHHHHHHHHHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEEE
Confidence 00000 000001111111111 123356789999999999999998887766655542 34688889
Q ss_pred cCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 285 DGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 285 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++ +|+.+++ +..+.+.+.|.+||++.
T Consensus 257 ~G-~H~~ml~---e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 257 PG-DHFTMMR---DHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp SS-CTTHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cC-CCccccc---CCHHHHHHHHHHHHHhc
Confidence 96 8986642 34667999999999864
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.90 E-value=8.6e-23 Score=150.62 Aligned_cols=188 Identities=14% Similarity=0.071 Sum_probs=131.8
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCC-----cCCCCCcccCCCh---HHHhh
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGH-----GRSDGIRCYLGDM---EKVAA 112 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-----G~s~~~~~~~~~~---~~~~~ 112 (323)
.+.|+..++.. +++|+||++||++++.. .|..+++.|.+ ++.+++++.+.. +..........+. ...++
T Consensus 10 ~~~~~~~~~~~-~~~p~vv~lHG~g~~~~-~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (209)
T d3b5ea1 10 AFPYRLLGAGK-ESRECLFLLHGSGVDET-TLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETA 86 (209)
T ss_dssp SSCEEEESTTS-SCCCEEEEECCTTBCTT-TTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHH
T ss_pred cceeEecCCCC-CCCCEEEEEcCCCCCHH-HHHHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHH
Confidence 45667776655 67899999999998877 78889999976 489998876421 1111101111122 33345
Q ss_pred cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhccc
Q 020633 113 SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTW 192 (323)
Q Consensus 113 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (323)
++.++|+.+..+..++.++++++|||+||.+++.++.++|+. ++++++++|.......
T Consensus 87 ~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~-~~~~v~~~g~~~~~~~--------------------- 144 (209)
T d3b5ea1 87 AFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGI-VRLAALLRPMPVLDHV--------------------- 144 (209)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTS-CSEEEEESCCCCCSSC---------------------
T ss_pred HHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCc-ceEEEEeCCccccccc---------------------
Confidence 566667777666666678999999999999999999999999 9999999875431100
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHH
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYE 272 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 272 (323)
......++|+++++|++|++++ +.++++.+
T Consensus 145 -------------------------------------------------~~~~~~~~p~~~~~G~~D~~~~-~~~~~~~~ 174 (209)
T d3b5ea1 145 -------------------------------------------------PATDLAGIRTLIIAGAADETYG-PFVPALVT 174 (209)
T ss_dssp -------------------------------------------------CCCCCTTCEEEEEEETTCTTTG-GGHHHHHH
T ss_pred -------------------------------------------------cccccccchheeeeccCCCccC-HHHHHHHH
Confidence 1112346899999999999987 45556666
Q ss_pred HcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHH
Q 020633 273 KAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 273 ~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.+. +.+++++++++ ||.+. +. ..+.+.+||.
T Consensus 175 ~l~~~G~~v~~~~~~g-gH~i~----~~----~~~~~~~wl~ 207 (209)
T d3b5ea1 175 LLSRHGAEVDARIIPS-GHDIG----DP----DAAIVRQWLA 207 (209)
T ss_dssp HHHHTTCEEEEEEESC-CSCCC----HH----HHHHHHHHHH
T ss_pred HHHHCCCCeEEEEECC-CCCCC----HH----HHHHHHHHhC
Confidence 553 34578899987 79876 33 4567788884
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=9.9e-24 Score=163.66 Aligned_cols=110 Identities=15% Similarity=0.234 Sum_probs=81.9
Q ss_pred EcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcH
Q 020633 36 ETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASS 114 (323)
Q Consensus 36 ~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 114 (323)
..++| +|.+...+. +++++|||+||++++.. .|..+++.| +++|+++|+||+|.|+ ++++.+++.
T Consensus 8 ~~~~~~~l~~l~~~~---~~~~Pl~l~Hg~~gs~~-~~~~l~~~L---~~~v~~~d~~g~~~~~-------~~~~~a~~~ 73 (286)
T d1xkta_ 8 VNPEGPTLMRLNSVQ---SSERPLFLVHPIEGSTT-VFHSLASRL---SIPTYGLQCTRAAPLD-------SIHSLAAYY 73 (286)
T ss_dssp CCTTSCSEEECCCCC---CCSCCEEEECCTTCCCG-GGHHHHHTC---SSCEEEECCCTTSCCS-------CHHHHHHHH
T ss_pred cCCCCCEEEEecCCC---CCCCeEEEECCCCccHH-HHHHHHHHc---CCeEEEEeCCCCCCCC-------CHHHHHHHH
Confidence 45677 776544443 33667999999999987 899998887 4899999999999874 677777777
Q ss_pred HHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 115 LSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 115 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
...+..+.. .++++|+||||||.+|+.+|.++|++ +.++++++..
T Consensus 74 ~~~~~~~~~-----~~~~~lvGhS~Gg~vA~~~A~~~p~~-~~~v~~l~~~ 118 (286)
T d1xkta_ 74 IDCIRQVQP-----EGPYRVAGYSYGACVAFEMCSQLQAQ-QSPAPTHNSL 118 (286)
T ss_dssp HHHHHHHCC-----SSCCEEEEETHHHHHHHHHHHHHHHC-------CCEE
T ss_pred HHHHHHhcC-----CCceEEeecCCccHHHHHHHHHHHHc-CCCceeEEEe
Confidence 666655442 44899999999999999999999998 8887776543
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=7.8e-23 Score=153.74 Aligned_cols=212 Identities=11% Similarity=0.011 Sum_probs=125.0
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCe
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPG 132 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 132 (323)
+.+++|||+||++++.. .|..+++.|. +|.|+++|++|+|. .++++.+.|+.+.. ..++
T Consensus 15 ~~~~~l~~lhg~~g~~~-~~~~la~~L~--~~~v~~~~~~g~~~-------------~a~~~~~~i~~~~~-----~~~~ 73 (230)
T d1jmkc_ 15 DQEQIIFAFPPVLGYGL-MYQNLSSRLP--SYKLCAFDFIEEED-------------RLDRYADLIQKLQP-----EGPL 73 (230)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHCT--TEEEEEECCCCSTT-------------HHHHHHHHHHHHCC-----SSCE
T ss_pred CCCCeEEEEcCCCCCHH-HHHHHHHHCC--CCEEeccCcCCHHH-------------HHHHHHHHHHHhCC-----CCcE
Confidence 34789999999999887 9999999994 59999999998863 23444455554432 4479
Q ss_pred EEEEechhHHHHHHHhhhcCCC--ceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHH
Q 020633 133 FLFGESMGGAATMLMYFQSEPN--TWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK 210 (323)
Q Consensus 133 ~l~G~S~Gg~~a~~~a~~~p~~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (323)
+|+||||||.+|+.+|.++|++ .+..++.+.+....................+....... ........
T Consensus 74 ~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 143 (230)
T d1jmkc_ 74 TLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDN----------EALNSEAV 143 (230)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTC----------SGGGSHHH
T ss_pred EEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccc----------cccccHHH
Confidence 9999999999999999886543 15566665554332211111000000000000000000 00001111
Q ss_pred HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCCcc
Q 020633 211 LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMYHS 290 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (323)
...+. ......... .........+++|+++|+|++|..++.... .+.+.. ..+.+++.+++ ||+
T Consensus 144 ~~~~~------------~~~~~~~~~-~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~-~~~~~~~~i~g-~H~ 207 (230)
T d1jmkc_ 144 KHGLK------------QKTHAFYSY-YVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEAT-TGAYRMKRGFG-THA 207 (230)
T ss_dssp HHHHH------------HHHHHHHHH-HHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGB-SSCEEEEECSS-CGG
T ss_pred HHHHH------------HHHHHHHHh-hhcccccccccCcceeeeecCCcccchhHH-HHHHhc-cCCcEEEEEcC-CCh
Confidence 00000 000111111 112345677899999999999998886543 333333 24678888885 999
Q ss_pred cccCCCchhHHHHHHHHHHHHHH
Q 020633 291 LIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
.++++ +..+++.+.|.+||++
T Consensus 208 ~ml~~--~~~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 208 EMLQG--ETLDRNAGILLEFLNT 228 (230)
T ss_dssp GTTSH--HHHHHHHHHHHHHHTC
T ss_pred hhcCC--ccHHHHHHHHHHHHhh
Confidence 88753 3467789999999875
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.88 E-value=1.3e-22 Score=159.63 Aligned_cols=257 Identities=12% Similarity=0.105 Sum_probs=155.8
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc--ccHHHHH---HHHhhCCcEEEEecCCCCcCCCCCc--------------
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG--WMFQKIC---ISFATWGYAVFAADLLGHGRSDGIR-------------- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~-------------- 101 (323)
+|.|..||..+....++||++|++.+++. ..|..++ ..|-...|.||++|..|.|.++..+
T Consensus 30 ~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg 109 (376)
T d2vata1 30 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYG 109 (376)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCG
T ss_pred eEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCccc
Confidence 67899999876566789999999987753 1233332 2333346999999999887654111
Q ss_pred --ccCCChHHHhhcHHHHHHHHHhcCCCCCCCe-EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH
Q 020633 102 --CYLGDMEKVAASSLSFFKHVRDSEPYRDLPG-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 102 --~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
-...++.+++.....++++|+.+ ++ .|+|.||||+.|+.+|..+|+. |+++|.+++......... .+
T Consensus 110 ~~FP~~ti~D~v~aq~~ll~~LGI~------~l~aViG~SmGGmqal~wa~~~Pd~-v~~li~Ia~~~~~s~~~~---a~ 179 (376)
T d2vata1 110 AKFPRTTIRDDVRIHRQVLDRLGVR------QIAAVVGASMGGMHTLEWAFFGPEY-VRKIVPIATSCRQSGWCA---AW 179 (376)
T ss_dssp GGCCCCCHHHHHHHHHHHHHHHTCC------CEEEEEEETHHHHHHHHHGGGCTTT-BCCEEEESCCSBCCHHHH---HH
T ss_pred ccCCcchhHHHHHHHHHHHHHhCcc------eEEEeecccHHHHHHHHHHHhchHH-HhhhcccccccccchHHH---HH
Confidence 11237788888888999999876 55 6899999999999999999999 999999987664332110 00
Q ss_pred HHHhhhhhhhhcccc------------------------------------cCC----cccccccccCC-----------
Q 020633 179 LFMYGLLFGLADTWA------------------------------------AMP----DNKMVGKAIKD----------- 207 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~------------------------------------~~~----~~~~~~~~~~~----------- 207 (323)
..........-+.|. ... .+.........
T Consensus 180 ~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~ 259 (376)
T d2vata1 180 FETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSH 259 (376)
T ss_dssp HHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-----------------------
T ss_pred HHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccccccccccc
Confidence 000000000000000 000 00000000000
Q ss_pred ------hHHHHHHhcCCCCcCCCCchhHHHHHHHHHH----------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHH
Q 020633 208 ------PEKLKVIASNPRRYTGKPRVGTMREIARVCQ----------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLY 271 (323)
Q Consensus 208 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 271 (323)
......+......+........+..+.+..+ ++.+.+++|++|+|+|.++.|.++|++..+++.
T Consensus 260 ~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a 339 (376)
T d2vata1 260 RAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMG 339 (376)
T ss_dssp ----CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHH
Confidence 0000000000000111111112222222221 133457889999999999999999999999999
Q ss_pred HHcCCCCccEEEec-CCCcccccCCCchhHHHHHHHHHHHHHH
Q 020633 272 EKASSADKSIKIYD-GMYHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 272 ~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
+.+ +++++.+++ ..||..++.+ .+++.+.|.+||++
T Consensus 340 ~~l--~~a~~~~I~S~~GHDaFL~e----~~~~~~~I~~FL~q 376 (376)
T d2vata1 340 RSI--PNSRLCVVDTNEGHDFFVME----ADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHS--TTEEEEECCCSCGGGHHHHT----HHHHHHHHHHHHTC
T ss_pred Hhc--CCCeEEEECCCCCccccccC----HHHHHHHHHHHHcC
Confidence 999 789999997 5799876533 45588999999863
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.87 E-value=2.9e-21 Score=150.89 Aligned_cols=259 Identities=10% Similarity=0.087 Sum_probs=155.4
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccc--------cHHHHH---HHHhhCCcEEEEecCCCCcCCCCCc--------
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGW--------MFQKIC---ISFATWGYAVFAADLLGHGRSDGIR-------- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~--------~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~-------- 101 (323)
+|.|..||..+....++||++|++.+++.. .|..++ ..|-...|.||++|..|.|.++..+
T Consensus 25 ~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~tg 104 (357)
T d2b61a1 25 NVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTG 104 (357)
T ss_dssp EEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTS
T ss_pred eEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCCC
Confidence 789999998775667899999999876531 133332 2343345999999999987644111
Q ss_pred ------ccCCChHHHhhcHHHHHHHHHhcCCCCCCCe-EEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCch
Q 020633 102 ------CYLGDMEKVAASSLSFFKHVRDSEPYRDLPG-FLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 102 ------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
-...++.+++.....++++|+.+ ++ .|+|.||||+.|+.+|..+|+. |+.+|.+++.......
T Consensus 105 ~~~g~~FP~iti~D~v~aq~~Ll~~LGI~------~l~~viG~SmGGmqAl~wa~~~Pd~-v~~~i~i~~~a~~s~~--- 174 (357)
T d2b61a1 105 KPYGSQFPNIVVQDIVKVQKALLEHLGIS------HLKAIIGGSFGGMQANQWAIDYPDF-MDNIVNLCSSIYFSAE--- 174 (357)
T ss_dssp SBCGGGCCCCCHHHHHHHHHHHHHHTTCC------CEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSSCCHH---
T ss_pred CCCCcccccchhHHHHHHHHHHHHHhCcc------eEEEEecccHHHHHHHHHHHhhhHH-Hhhhcccccccccchh---
Confidence 11247788888888899998866 66 6889999999999999999999 9999998876443221
Q ss_pred hhHHHHHhhhhhhhhccccc----CCc---ccc------cccccCC----------------------hHHHHHHhcCCC
Q 020633 175 SKLHLFMYGLLFGLADTWAA----MPD---NKM------VGKAIKD----------------------PEKLKVIASNPR 219 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~----~~~---~~~------~~~~~~~----------------------~~~~~~~~~~~~ 219 (323)
..............-+.+.. ... ..+ ....+.. ......+.....
T Consensus 175 ~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~ 254 (357)
T d2b61a1 175 AIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGK 254 (357)
T ss_dssp HHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHH
Confidence 01011000000000000000 000 000 0000000 001111111000
Q ss_pred CcCCCCchhHHHHHHHHHH---------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecC-C
Q 020633 220 RYTGKPRVGTMREIARVCQ---------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDG-M 287 (323)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~ 287 (323)
++..+.....+..+.+..+ .+.+.+++|++|+|+|..+.|.++|++..++..+.+. ..++++++++. .
T Consensus 255 kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~ 334 (357)
T d2b61a1 255 KFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDY 334 (357)
T ss_dssp HHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 1111112222222222221 1334578999999999999999999999988888874 23568888875 5
Q ss_pred CcccccCCCchhHHHHHHHHHHHHHH
Q 020633 288 YHSLIQGEPDENANLVLKDMREWIDE 313 (323)
Q Consensus 288 gH~~~~~~~~~~~~~~~~~i~~fl~~ 313 (323)
||..++.+ .+++.+.|.+||+.
T Consensus 335 GHdafL~e----~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 335 GHDAFLVD----YDQFEKRIRDGLAG 356 (357)
T ss_dssp GGGHHHHC----HHHHHHHHHHHHHT
T ss_pred CccccCcC----HHHHHHHHHHHHcc
Confidence 99887533 45688889999863
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.87 E-value=8.1e-21 Score=143.94 Aligned_cols=196 Identities=16% Similarity=0.074 Sum_probs=137.7
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCC---CccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChH
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGS---DTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDME 108 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 108 (323)
..+...++ .-...+|.|.+ .+.|+||++||++. +.. .+..++..|+++||.|+.+|+|..+. .++.
T Consensus 40 ~dv~Yg~~~~~~lDiy~P~~-~~~P~vv~iHGG~w~~g~~~-~~~~~a~~l~~~G~~Vv~~~YRl~p~--------~~~p 109 (261)
T d2pbla1 40 LNLSYGEGDRHKFDLFLPEG-TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPE--------VRIS 109 (261)
T ss_dssp EEEESSSSTTCEEEEECCSS-SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTT--------SCHH
T ss_pred CCcCCCCCcCeEEEEeccCC-CCCCeEEEECCCCCccCChh-HhhhHHHHHhcCCceeeccccccccc--------ccCc
Confidence 34555556 66677888876 67899999999753 223 56677889999999999999996533 2678
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC------CCceeEEEEccCcccCCCCCchhhHHHHHh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE------PNTWTGLIFSAPLFVIPENMKPSKLHLFMY 182 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 182 (323)
..++|+.+.++++..+. +.+|+|+|||.||+++..++.... .. +++++.+++............
T Consensus 110 ~~~~d~~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------ 179 (261)
T d2pbla1 110 EITQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGAR-IRNVVPISPLSDLRPLLRTSM------ 179 (261)
T ss_dssp HHHHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTT-EEEEEEESCCCCCGGGGGSTT------
T ss_pred hhHHHHHHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhc-hhhhhccccccccchhhhhhh------
Confidence 88999999999998875 468999999999999987776532 23 889998888765432110000
Q ss_pred hhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCccc
Q 020633 183 GLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVT 262 (323)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 262 (323)
. . ... .+. ....... ......+...|+++++|++|..+
T Consensus 180 ---~----~--------~~~---~~~--~~~~~~S----------------------P~~~~~~~~~P~li~~G~~D~~~ 217 (261)
T d2pbla1 180 ---N----E--------KFK---MDA--DAAIAES----------------------PVEMQNRYDAKVTVWVGGAERPA 217 (261)
T ss_dssp ---H----H--------HHC---CCH--HHHHHTC----------------------GGGCCCCCSCEEEEEEETTSCHH
T ss_pred ---c----c--------ccc---CCH--HHHHHhC----------------------chhhcccCCCeEEEEEecCCCch
Confidence 0 0 000 000 0000000 12334566899999999999988
Q ss_pred CchhHHHHHHHcCCCCccEEEecCCCccccc
Q 020633 263 CPTSSKLLYEKASSADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (323)
+.++++.+.+.+ +++.+++++.+|+..+
T Consensus 218 ~~~qs~~~~~~l---~~~~~~~~~~~HF~vi 245 (261)
T d2pbla1 218 FLDQAIWLVEAW---DADHVIAFEKHHFNVI 245 (261)
T ss_dssp HHHHHHHHHHHH---TCEEEEETTCCTTTTT
T ss_pred HHHHHHHHHHHh---CCCceEeCCCCchhHH
Confidence 888899999888 3678899999997654
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.87 E-value=9.4e-21 Score=148.31 Aligned_cols=258 Identities=11% Similarity=0.111 Sum_probs=157.1
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCcc------------ccHHHHH---HHHhhCCcEEEEecCCCCcCCCCCc----
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTG------------WMFQKIC---ISFATWGYAVFAADLLGHGRSDGIR---- 101 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~---- 101 (323)
+|.|..||..+....++||++|++.+++. ..|..++ ..|-...|.||++|..|.|.|+..+
T Consensus 28 ~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~~ 107 (362)
T d2pl5a1 28 VIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIH 107 (362)
T ss_dssp EEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBC
T ss_pred eEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccccc
Confidence 78999999876566789999999987631 1233222 2333445999999999988765221
Q ss_pred ----------ccCCChHHHhhcHHHHHHHHHhcCCCCCCCeE-EEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCC
Q 020633 102 ----------CYLGDMEKVAASSLSFFKHVRDSEPYRDLPGF-LFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPE 170 (323)
Q Consensus 102 ----------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~ 170 (323)
....++.+++.....++++++.+ ++. |+|.||||+.|+.+|..+|+. |+.+|.+++......
T Consensus 108 p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~------~l~~viG~SmGGmqAl~wA~~yPd~-v~~~v~ia~sa~~s~ 180 (362)
T d2pl5a1 108 PETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE------KLFCVAGGSMGGMQALEWSIAYPNS-LSNCIVMASTAEHSA 180 (362)
T ss_dssp TTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS------SEEEEEEETHHHHHHHHHHHHSTTS-EEEEEEESCCSBCCH
T ss_pred cccccccCcCCccchhHHHHHHHHHHHHHhCcC------eeEEEeehhHHHHHHHHHHHhCchH-hhhhcccccccccCH
Confidence 11235677777777888888866 555 889999999999999999999 999999987654331
Q ss_pred CCchhhHHHHHhhhhhhhhccccc-----C-Ccc------cccccccCC-hHHHHHH--------------------hcC
Q 020633 171 NMKPSKLHLFMYGLLFGLADTWAA-----M-PDN------KMVGKAIKD-PEKLKVI--------------------ASN 217 (323)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~------~~~~~~~~~-~~~~~~~--------------------~~~ 217 (323)
. ...+..........-+.|.. . +.. .+....+.. ......+ ...
T Consensus 181 ~---~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~ 257 (362)
T d2pl5a1 181 M---QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ 257 (362)
T ss_dssp H---HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred H---HHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHH
Confidence 1 11111110000000000000 0 000 000000000 1111111 111
Q ss_pred CCCcCCCCchhHHHHHHHHHH--------HHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCC--CCccEEEec-C
Q 020633 218 PRRYTGKPRVGTMREIARVCQ--------YIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASS--ADKSIKIYD-G 286 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~-~ 286 (323)
...+........+..+.+..+ .+.+.+++|++|+|+|..+.|.++|++..+++.+.++. .++++++++ .
T Consensus 258 g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~ 337 (362)
T d2pl5a1 258 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSG 337 (362)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 112222222233333333222 24556899999999999999999999999999998842 244677775 5
Q ss_pred CCcccccCCCchhHHHHHHHHHHHHH
Q 020633 287 MYHSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 287 ~gH~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
.||..++.+.++ +.+.|.+||+
T Consensus 338 ~GHdaFL~e~~~----~~~~I~~FL~ 359 (362)
T d2pl5a1 338 EGHDSFLLKNPK----QIEILKGFLE 359 (362)
T ss_dssp BSSGGGGSCCHH----HHHHHHHHHH
T ss_pred CCcchhccCHHH----HHHHHHHHHc
Confidence 799998766655 8888999985
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.87 E-value=4.4e-25 Score=174.45 Aligned_cols=252 Identities=14% Similarity=0.101 Sum_probs=135.7
Q ss_pred cEEEEEecCCCCCcceEEEEecCCCCCccccHH-------HHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhc
Q 020633 41 KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQ-------KICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAAS 113 (323)
Q Consensus 41 ~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 113 (323)
.+++..+.|.+ +++++|||+||++.+.. .|. .++..++++||+|+++|+||||.|...... .+...+.++
T Consensus 45 ~~~v~~~~p~~-~~~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~-~~~~~~~~~ 121 (318)
T d1qlwa_ 45 QMYVRYQIPQR-AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISA-INAVKLGKA 121 (318)
T ss_dssp CEEEEEEEETT-CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHH-HHHHHTTSS
T ss_pred eEEEEEECCCC-CCCCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcccc-CCHHHHHHH
Confidence 34444455554 44667899999998765 554 367889999999999999999999754332 244555566
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhh-HHHHHhhhhhhhhccc
Q 020633 114 SLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSK-LHLFMYGLLFGLADTW 192 (323)
Q Consensus 114 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 192 (323)
+.+.++.+... ..+.+++|||+||.++..++..........+++..+............ ................
T Consensus 122 ~~~~l~~~~~~----~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (318)
T d1qlwa_ 122 PASSLPDLFAA----GHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTV 197 (318)
T ss_dssp CGGGSCCCBCC----CHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHhhc----ccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhcccc
Confidence 66655544332 335778899999999888877654431333333222222111111111 1111111111111110
Q ss_pred ccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhH-----
Q 020633 193 AAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSS----- 267 (323)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~----- 267 (323)
... ............................ ...........+++|+|+++|++|..+|....
T Consensus 198 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~ 265 (318)
T d1qlwa_ 198 LLS-------HSQSGIYPFQTAAMNPKGITAIVSVEPG-----ECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKAC 265 (318)
T ss_dssp EEE-------EGGGTTHHHHHHHHCCTTEEEEEEESCS-----CCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHH
T ss_pred chh-------hhcccchhhhhhhhhhhHHHHHHhhhcc-----cccchhhhhhhccCCEEEEecCcCcccChhhhHHHHH
Confidence 000 0000011111111111111000000000 00001344566789999999999999986432
Q ss_pred HHHHHHc--CCCCccEEEec-----CCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 268 KLLYEKA--SSADKSIKIYD-----GMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 268 ~~~~~~~--~~~~~~~~~~~-----~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
+.+.+.+ .+.+++++.++ |+||++++|.+ .+++.+.|.+||+++
T Consensus 266 ~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~---~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 266 HAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRN---NLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTT---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcEEEEecccccCCCcCccccCcC---HHHHHHHHHHHHHhc
Confidence 2333333 13567888865 67899986443 566999999999986
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=2.5e-21 Score=142.30 Aligned_cols=178 Identities=16% Similarity=0.126 Sum_probs=126.5
Q ss_pred CcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCc-----ccCCCh---HHHhhcHHHHHHHHHhc
Q 020633 53 KVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIR-----CYLGDM---EKVAASSLSFFKHVRDS 124 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~~~~~---~~~~~d~~~~l~~l~~~ 124 (323)
..+|+||++||++++.. .|..+++.|.+ ++.|+.++.+..+...... ....+. ...++++..+++.....
T Consensus 15 ~~~P~vi~lHG~G~~~~-~~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 92 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDEN-QFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 92 (203)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhc
Confidence 45899999999998877 78888888875 4889998777554332110 111122 33344555555544333
Q ss_pred CCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccc
Q 020633 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKA 204 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (323)
. +..+++++|+|+||.+++.++..+|+. +.++++.++.......
T Consensus 93 ~--~~~~v~l~G~S~Gg~~a~~~a~~~p~~-~~~~~~~~~~~~~~~~--------------------------------- 136 (203)
T d2r8ba1 93 Y--QAGPVIGLGFSNGANILANVLIEQPEL-FDAAVLMHPLIPFEPK--------------------------------- 136 (203)
T ss_dssp H--TCCSEEEEEETHHHHHHHHHHHHSTTT-CSEEEEESCCCCSCCC---------------------------------
T ss_pred C--CCceEEEEEecCHHHHHHHHHHhhhhc-ccceeeeccccccccc---------------------------------
Confidence 2 266899999999999999999999998 9999998875432110
Q ss_pred cCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcC--CCCccEE
Q 020633 205 IKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKAS--SADKSIK 282 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 282 (323)
........|++++||++|+++|.+.++++.+.+. +.+++++
T Consensus 137 -------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~ 179 (203)
T d2r8ba1 137 -------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETV 179 (203)
T ss_dssp -------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEE
T ss_pred -------------------------------------cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEE
Confidence 0112336799999999999999999999888774 2346888
Q ss_pred EecCCCcccccCCCchhHHHHHHHHHHHHHHH
Q 020633 283 IYDGMYHSLIQGEPDENANLVLKDMREWIDER 314 (323)
Q Consensus 283 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 314 (323)
++++ ||.+. .+ ..+.+.+||.++
T Consensus 180 ~~~g-gH~~~----~~----~~~~~~~wl~~~ 202 (203)
T d2r8ba1 180 WHPG-GHEIR----SG----EIDAVRGFLAAY 202 (203)
T ss_dssp EESS-CSSCC----HH----HHHHHHHHHGGG
T ss_pred EECC-CCcCC----HH----HHHHHHHHHHhc
Confidence 8986 79865 33 467788999764
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.86 E-value=4.6e-20 Score=148.00 Aligned_cols=139 Identities=16% Similarity=0.120 Sum_probs=109.3
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCc------cc----cHHHHHHHHhhCCcEEEEecCCCCcCC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT------GW----MFQKICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~------~~----~~~~~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
..+++.+++.|| +|...+|.|.+.++.|+||+.|+++... .. .+....+.|+++||.|+.+|.||+|.|
T Consensus 23 ~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S 102 (381)
T d1mpxa2 23 IKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGS 102 (381)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred eEEEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCC
Confidence 346789999999 9999999998877889999999876321 10 112345778999999999999999999
Q ss_pred CCCcccCC--------ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 98 DGIRCYLG--------DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 98 ~~~~~~~~--------~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
.+...... ...+.++|..++++++..+..++..+|.++|+|+||.+++.+|...|.. ++++|..++..+.
T Consensus 103 ~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~-l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 103 EGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPA-LKVAVPESPMIDG 180 (381)
T ss_dssp CSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTT-EEEEEEESCCCCT
T ss_pred CCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccc-cceeeeecccccc
Confidence 86432111 1123468999999999877656677999999999999999999998888 9999998887654
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.84 E-value=6e-20 Score=136.20 Aligned_cols=189 Identities=19% Similarity=0.192 Sum_probs=121.0
Q ss_pred cCCCCCcceEEEEecCCCCCccccHHHHHHHHhhC--CcEEEEecCCCC--------cCCC------CCcccCCC---hH
Q 020633 48 LPLDQKVKATVYMTHGYGSDTGWMFQKICISFATW--GYAVFAADLLGH--------GRSD------GIRCYLGD---ME 108 (323)
Q Consensus 48 ~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~--------G~s~------~~~~~~~~---~~ 108 (323)
.|.+ .++++||++||+|++.. .+..+.+.|... ++.+++++-|.. .... .......+ ++
T Consensus 8 ~p~~-~~~~~Vi~lHG~G~~~~-~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 85 (218)
T d1auoa_ 8 QPAK-PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE 85 (218)
T ss_dssp CCSS-CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred CCCC-CCCeEEEEEcCCCCChh-hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHH
Confidence 3443 56789999999998877 777888888654 456666654311 0000 00000012 22
Q ss_pred HHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 109 KVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.....+.++++.. .+..++..+++++|+|+||.+++.++..+++..+.+++++++..........
T Consensus 86 ~~~~~v~~li~~~-~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~-------------- 150 (218)
T d1auoa_ 86 VSAKMVTDLIEAQ-KRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELE-------------- 150 (218)
T ss_dssp HHHHHHHHHHHHH-HHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTCC--------------
T ss_pred HHHHHHHHHHHHH-HHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccccc--------------
Confidence 2223334444433 2334557799999999999999988765443338999998865321100000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
......+.|++++||++|.++|.+.++
T Consensus 151 -----------------------------------------------------~~~~~~~~pvl~~hG~~D~vvp~~~~~ 177 (218)
T d1auoa_ 151 -----------------------------------------------------LSASQQRIPALCLHGQYDDVVQNAMGR 177 (218)
T ss_dssp -----------------------------------------------------CCHHHHTCCEEEEEETTCSSSCHHHHH
T ss_pred -----------------------------------------------------cchhccCCCEEEEecCCCCccCHHHHH
Confidence 000112679999999999999999999
Q ss_pred HHHHHcCC--CCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 020633 269 LLYEKASS--ADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 269 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++.+.+.. .+++++.++ +||... .+ ..+.+.+||.+++
T Consensus 178 ~~~~~L~~~g~~~~~~~~~-~gH~i~----~~----~~~~i~~wl~~~l 217 (218)
T d1auoa_ 178 SAFEHLKSRGVTVTWQEYP-MGHEVL----PQ----EIHDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHTTTCCEEEEEES-CSSSCC----HH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEC-CCCccC----HH----HHHHHHHHHHHhc
Confidence 88887753 356888887 689775 33 5678999998876
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.84 E-value=5.7e-19 Score=138.71 Aligned_cols=256 Identities=10% Similarity=0.006 Sum_probs=143.2
Q ss_pred cCcccceeEEEcCCC--cEEEEEecCCCC-CcceEEEEecCCCC---CccccHHHHHHHHhh-CCcEEEEecCCCCcCCC
Q 020633 26 QGVRNGKKYFETPNG--KLFTQSFLPLDQ-KVKATVYMTHGYGS---DTGWMFQKICISFAT-WGYAVFAADLLGHGRSD 98 (323)
Q Consensus 26 ~~~~~~~~~~~~~~g--~l~~~~~~~~~~-~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~ 98 (323)
.++..++..+...+| .|..++|.|.+. ++.|+||++||+|. +.. .+..++..++. .||.|+.+|+|.....
T Consensus 46 ~~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~-~~~~~~~~la~~~G~~V~~vdYrl~pe~- 123 (317)
T d1lzla_ 46 DGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPET- 123 (317)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTS-
T ss_pred CCceEEEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCccccccccc-ccchHHHhHHhhcCCccccccccccccc-
Confidence 456677788888888 699999998752 46789999999763 344 45566666655 5999999999976543
Q ss_pred CCcccCCChHHHhhcHHHHHHHHHh---cCCCCCCCeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccCCCCC
Q 020633 99 GIRCYLGDMEKVAASSLSFFKHVRD---SEPYRDLPGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENM 172 (323)
Q Consensus 99 ~~~~~~~~~~~~~~d~~~~l~~l~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~~~~~ 172 (323)
.+....+|+.+.++++.. +.+++.++|+++|+|.||.+++.++...++ ......++..+........
T Consensus 124 -------~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (317)
T d1lzla_ 124 -------TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLET 196 (317)
T ss_dssp -------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCS
T ss_pred -------cccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcccccccccccccccccccccc
Confidence 334455666666555543 223445689999999999999888765321 1133334433332211111
Q ss_pred chhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEE
Q 020633 173 KPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFL 252 (323)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 252 (323)
.. ..... ........................... ....... ............|++
T Consensus 197 ~s---~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~pp~l 252 (317)
T d1lzla_ 197 VS---MTNFV--------------DTPLWHRPNAILSWKYYLGESYSGPED-PDVSIYA------APSRATDLTGLPPTY 252 (317)
T ss_dssp HH---HHHCS--------------SCSSCCHHHHHHHHHHHHCTTCCCTTC-SCCCTTT------CGGGCSCCTTCCCEE
T ss_pred cc---ccccc--------------ccchhhhhhhHHHHhhhccccccCCCC-chhcccc------CchhhhhccCCCCeE
Confidence 00 00000 000000000000000000000000000 0000000 000000112246999
Q ss_pred EEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHh
Q 020633 253 TVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVE 316 (323)
Q Consensus 253 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 316 (323)
+++|+.|.+ ...++.+.+++. +..++++++++++|.+.+.......++..+.+.+||+++++
T Consensus 253 i~~g~~D~l--~~~~~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 253 LSTMELDPL--RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp EEEETTCTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCC--HHHHHHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 999999965 446667776663 34578999999999776544445556677888999998875
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.83 E-value=2.5e-20 Score=148.55 Aligned_cols=133 Identities=16% Similarity=0.079 Sum_probs=104.4
Q ss_pred ceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccc---cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCC
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGW---MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGD 106 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 106 (323)
+.+.|++.|| +|.+.+|.|.+.++.|+||+.||++..... .+....+.|+++||.|+++|.||+|.|.+.......
T Consensus 6 ~~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~ 85 (347)
T d1ju3a2 6 SNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVD 85 (347)
T ss_dssp EEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTT
T ss_pred eCeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccc
Confidence 4578999999 999999999886778999999998753221 222345678899999999999999999976544322
Q ss_pred hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 107 MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 107 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
...|..++++++..... .+.+|.++|+|+||.+++.+|...|.. +++++...+..+.
T Consensus 86 ---~~~d~~d~i~w~~~q~~-~~grVg~~G~SygG~~~~~~A~~~~~~-l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 86 ---DEADAEDTLSWILEQAW-CDGNVGMFGVSYLGVTQWQAAVSGVGG-LKAIAPSMASADL 142 (347)
T ss_dssp ---HHHHHHHHHHHHHHSTT-EEEEEEECEETHHHHHHHHHHTTCCTT-EEEBCEESCCSCT
T ss_pred ---hhhhHHHHHHHHHhhcc-CCcceEeeeccccccchhhhhhccccc-ceeeeeccccchh
Confidence 23566777777776533 245999999999999999999998887 9999988877654
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.3e-19 Score=138.70 Aligned_cols=197 Identities=11% Similarity=0.038 Sum_probs=117.0
Q ss_pred CcceEEEEecCCCC----CccccHHH----HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 53 KVKATVYMTHGYGS----DTGWMFQK----ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 53 ~~~~~vv~~HG~~~----~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
+++|+||++||++. .....|.. ++..+.+.||.|+++|+|..+.. .+....+|+.+.++++...
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~--------~~~~~~~d~~~~~~~l~~~ 100 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAVSNITRLVKE 100 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcch--------hhhHHHHhhhhhhhccccc
Confidence 56899999999642 11223333 45556678999999999965443 3455677888888887766
Q ss_pred CCCCCCCeEEEEechhHHHHHHHhhhcCCCc----------------eeEEEEccCcccCCCCCchhhHHHHHhhhhhhh
Q 020633 125 EPYRDLPGFLFGESMGGAATMLMYFQSEPNT----------------WTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGL 188 (323)
Q Consensus 125 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~----------------v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (323)
.+ ..+++|+|||+||.+++.++...++.. +...+...+.... .........
T Consensus 101 ~~--~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~- 167 (263)
T d1vkha_ 101 KG--LTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL----------KELLIEYPE- 167 (263)
T ss_dssp HT--CCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH----------HHHHHHCGG-
T ss_pred cc--ccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccc----------hhhhhhccc-
Confidence 54 668999999999999999888765431 2222222221110 000000000
Q ss_pred hcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHH
Q 020633 189 ADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSK 268 (323)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 268 (323)
........+......... .. ... .......+.++.+|+++++|++|.++|.+.+.
T Consensus 168 -----------------~~~~~~~~~~~~~~~~~~-~~---~~~----~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~ 222 (263)
T d1vkha_ 168 -----------------YDCFTRLAFPDGIQMYEE-EP---SRV----MPYVKKALSRFSIDMHLVHSYSDELLTLRQTN 222 (263)
T ss_dssp -----------------GHHHHHHHCTTCGGGCCC-CH---HHH----HHHHHHHHHHHTCEEEEEEETTCSSCCTHHHH
T ss_pred -----------------cchhhhcccccccccccc-cc---ccc----CccccccccccCCCeeeeecCCCcccCHHHHH
Confidence 000000001011110100 00 000 00012233456889999999999999999999
Q ss_pred HHHHHcC--CCCccEEEecCCCcccccCC
Q 020633 269 LLYEKAS--SADKSIKIYDGMYHSLIQGE 295 (323)
Q Consensus 269 ~~~~~~~--~~~~~~~~~~~~gH~~~~~~ 295 (323)
.+.+.+. +.+++++++++++|...+++
T Consensus 223 ~l~~~L~~~g~~~~~~~~~~~~H~~~~~~ 251 (263)
T d1vkha_ 223 CLISCLQDYQLSFKLYLDDLGLHNDVYKN 251 (263)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSGGGGGGC
T ss_pred HHHHHHHHCCCCEEEEEECCCCchhhhcC
Confidence 9988874 34578999999999776543
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=1.5e-20 Score=123.07 Aligned_cols=99 Identities=19% Similarity=0.158 Sum_probs=80.3
Q ss_pred eEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHh
Q 020633 33 KYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 33 ~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 111 (323)
.-+...+| +|+|...|. .|+|||+||.+. .| .+.|. ++|+|+++|+||||.|+.++ .+.++++
T Consensus 3 ~~~~~~~G~~l~y~~~G~-----G~pvlllHG~~~----~w---~~~L~-~~yrvi~~DlpG~G~S~~p~---~s~~~~a 66 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVGK-----GPPVLLVAEEAS----RW---PEALP-EGYAFYLLDLPGYGRTEGPR---MAPEELA 66 (122)
T ss_dssp EEEEEETTEEEEEEEECC-----SSEEEEESSSGG----GC---CSCCC-TTSEEEEECCTTSTTCCCCC---CCHHHHH
T ss_pred ceEEEECCEEEEEEEEcC-----CCcEEEEecccc----cc---ccccc-CCeEEEEEeccccCCCCCcc---cccchhH
Confidence 34556678 999999985 479999998542 23 23454 57999999999999997542 4899999
Q ss_pred hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCC
Q 020633 112 ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEP 153 (323)
Q Consensus 112 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 153 (323)
+++.++++.+..+ +.+++||||||.+++.+++..+.
T Consensus 67 ~~i~~ll~~L~i~------~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 67 HFVAGFAVMMNLG------APWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHTTCC------SCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC------CcEEEEeCccHHHHHHHHhhccc
Confidence 9999999999865 78999999999999999987544
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.81 E-value=1.3e-18 Score=131.69 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=127.9
Q ss_pred cceEEEEecCC--CCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 54 VKATVYMTHGY--GSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 54 ~~~~vv~~HG~--~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
.+++++|+||+ +++.. .|..+++.|... +.|+++|+||+|.+.... .+++++++++.+.|..... ..+
T Consensus 41 ~~~~l~c~~~~~~gg~~~-~y~~La~~L~~~-~~V~al~~pG~~~~e~~~---~s~~~~a~~~~~~i~~~~~-----~~P 110 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPH-EFTRLAGALRGI-APVRAVPQPGYEEGEPLP---SSMAAVAAVQADAVIRTQG-----DKP 110 (255)
T ss_dssp CSSEEEEECCCSSSCSGG-GGHHHHHHHTTT-CCEEEECCTTSSTTCCEE---SSHHHHHHHHHHHHHHTTS-----SSC
T ss_pred CCCeEEEECCCCCCCCHH-HHHHHHHhcCCC-ceEEEEeCCCcCCCCCCC---CCHHHHHHHHHHHHHHhCC-----CCC
Confidence 47899999984 34444 899999999776 999999999999875433 3788888888776654432 448
Q ss_pred eEEEEechhHHHHHHHhhhc---CCCceeEEEEccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCCh
Q 020633 132 GFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDP 208 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
++|+||||||.+|+.+|.+. ... |..++++++...... ...... ............ . ....+.
T Consensus 111 ~~L~GhS~Gg~vA~e~A~~l~~~g~~-v~~lvlld~~~p~~~-----~~~~~~---~~~~~~~~~~~~---~--~~~~~~ 176 (255)
T d1mo2a_ 111 FVVAGHSAGALMAYALATELLDRGHP-PRGVVLIDVYPPGHQ-----DAMNAW---LEELTATLFDRE---T--VRMDDT 176 (255)
T ss_dssp EEEEECSTTHHHHHHHHHHHHHHTCC-CSEEEEEECSCSSHH-----HHHHHH---HHHHHTTCC---------CCCCHH
T ss_pred EEEEEeCCcHHHHHHHHHhhHhcCCC-ccEEEEECCCCCCCc-----cchhhH---HHHHHHHhhccc---c--ccCCHH
Confidence 99999999999999999764 445 899999987543211 001111 011100000000 0 000000
Q ss_pred HHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCCCcccCchhHHHHHHHcCCCCccEEEecCCC
Q 020633 209 EKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTADGVTCPTSSKLLYEKASSADKSIKIYDGMY 288 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (323)
. +.......+... .-....+.+|++++.+++|....... .+.... ....+++.+++ +
T Consensus 177 ~-----------------l~a~~~~~~~~~--~~~~~~~~~p~l~v~a~~~~~~~~~~--~w~~~~-~~~~~~~~v~G-~ 233 (255)
T d1mo2a_ 177 R-----------------LTALGAYDRLTG--QWRPRETGLPTLLVSAGEPMGPWPDD--SWKPTW-PFEHDTVAVPG-D 233 (255)
T ss_dssp H-----------------HHHHHHHHHHHH--HCCCCCCCCCEEEEECCSSSSCCTTC--CCCCCC-CSSCEEEECCS-C
T ss_pred H-----------------HHHHHHHHHHHh--cCCCccccceEEEeecCCCCCcchhh--HHHHhC-CCCcEEEEECC-C
Confidence 0 001111111111 12235679999999998875543321 222222 24578889996 8
Q ss_pred cccccCCCchhHHHHHHHHHHHHH
Q 020633 289 HSLIQGEPDENANLVLKDMREWID 312 (323)
Q Consensus 289 H~~~~~~~~~~~~~~~~~i~~fl~ 312 (323)
|+.+++ +..+.+.+.|.+||.
T Consensus 234 H~~ml~---~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 234 HFTMVQ---EHADAIARHIDAWLG 254 (255)
T ss_dssp CSSCSS---CCHHHHHHHHHHHHT
T ss_pred Cccccc---ccHHHHHHHHHHHhC
Confidence 987653 346778999999984
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.81 E-value=3.6e-19 Score=141.74 Aligned_cols=260 Identities=15% Similarity=0.144 Sum_probs=152.7
Q ss_pred CcccceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCC---cc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCC
Q 020633 27 GVRNGKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSD---TG-WMFQKICISFATWGYAVFAADLLGHGRSDGI 100 (323)
Q Consensus 27 ~~~~~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~---~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 100 (323)
++..++..+...|| .|..++|.|.+. ++.|+||++||+|.. .. ..+..++..|+++|+.|+++|+|..+...+.
T Consensus 76 ~v~~~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe 155 (358)
T d1jkma_ 76 DVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH 155 (358)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred CccEEEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccccc
Confidence 45667788888999 999999998763 467899999998642 21 2456788889999999999999976433211
Q ss_pred cccCCChHHHhhcHHHHHHHHHhcC-CCCCCCeEEEEechhHHHHHHHhhh-----cCCCceeEEEEccCcccCCCCCch
Q 020633 101 RCYLGDMEKVAASSLSFFKHVRDSE-PYRDLPGFLFGESMGGAATMLMYFQ-----SEPNTWTGLIFSAPLFVIPENMKP 174 (323)
Q Consensus 101 ~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~~v~~~vl~~~~~~~~~~~~~ 174 (323)
..+....+|+.+.++++.... ..+..+++|+|+|.||.+++.++.. .... +.++++..|..........
T Consensus 156 ----~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~ 230 (358)
T d1jkma_ 156 ----HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDA-IDGVYASIPYISGGYAWDH 230 (358)
T ss_dssp ----CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGG-CSEEEEESCCCCCCTTSCH
T ss_pred ----CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCcc-ccccccccceeccccCccc
Confidence 245566788888888776431 1225689999999999998877654 1223 7888888887654432222
Q ss_pred hhHHHHHhhhhhhhhcccccCCcccccccccCChHH---HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCE
Q 020633 175 SKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEK---LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPF 251 (323)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 251 (323)
.............. .. ....... ...+......... +....... ....++. -.|+
T Consensus 231 ~~~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~a-------~~~~~~~-lPp~ 288 (358)
T d1jkma_ 231 ERRLTELPSLVEND----GY---------FIENGGMALLVRAYDPTGEHAED-PIAWPYFA-------SEDELRG-LPPF 288 (358)
T ss_dssp HHHHHHCTHHHHTT----TS---------SSCHHHHHHHHHHHSSSSTTTTC-TTTCGGGC-------CHHHHTT-CCCE
T ss_pred hhhcccccchhccc----cc---------ccchhhhhhHHhhcCCccCCccC-cccccccc-------chhhccC-CCCE
Confidence 11111000000000 00 0000000 0000000000000 00000000 0000111 2489
Q ss_pred EEEeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCccccc---CCCchhHHHHHHHHHHHHHHHH
Q 020633 252 LTVHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQ---GEPDENANLVLKDMREWIDERV 315 (323)
Q Consensus 252 l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~---~~~~~~~~~~~~~i~~fl~~~~ 315 (323)
++++|+.|.+. ..+..+.+++. +..+++++++|.+|.+.. ....+..+++.+.|..|+.++.
T Consensus 289 li~~g~~D~l~--~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 289 VVAVNELDPLR--DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp EEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCH--HHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999765 45566666653 345789999999996532 1112456778899999998775
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.80 E-value=3.5e-18 Score=138.09 Aligned_cols=272 Identities=14% Similarity=0.116 Sum_probs=159.5
Q ss_pred cCcccceeEEEcC-----CC-c--EEEEEecCCCCCcceEEEEecCCCCCc-----------------------------
Q 020633 26 QGVRNGKKYFETP-----NG-K--LFTQSFLPLDQKVKATVYMTHGYGSDT----------------------------- 68 (323)
Q Consensus 26 ~~~~~~~~~~~~~-----~g-~--l~~~~~~~~~~~~~~~vv~~HG~~~~~----------------------------- 68 (323)
..+-.+.+++.+. || + |+..++.|...++-|+|+..+..+...
T Consensus 19 ~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~~~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T d1lnsa3 19 SLLEREVLWVESPVDSEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQK 98 (405)
T ss_dssp GGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCC
T ss_pred CCceEeEEEEeCCCCCCCCCCEeEEEEEEEccCCCCCceEEEEeCCcCCCCccccccccccccccccccccccccccccc
Confidence 3334455666555 78 4 999999998755557777777653210
Q ss_pred ------------------------cccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhc
Q 020633 69 ------------------------GWMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDS 124 (323)
Q Consensus 69 ------------------------~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 124 (323)
.+. ....++|+++||.|+.+|.||.|.|.+.... .+.+ ..+|..++|+++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~-~~~~-e~~D~~~~IeWl~~~ 175 (405)
T d1lnsa3 99 LPQKLSAKAKELPIVDKAPYRFTHGWT-YSLNDYFLTRGFASIYVAGVGTRSSDGFQTS-GDYQ-QIYSMTAVIDWLNGR 175 (405)
T ss_dssp CCCCCCCCCCCCCEESSCSCBCCCCCC-CHHHHHHHTTTCEEEEECCTTSTTSCSCCCT-TSHH-HHHHHHHHHHHHTTS
T ss_pred ccccccccccccccccccccccccccc-ccchHHHHhCCCEEEEECCCCCCCCCCcccc-CChh-hhhhHHHHHHHHHhc
Confidence 001 1345789999999999999999999986543 2333 478999999999753
Q ss_pred C--------------CCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCc-----------hhhHHH
Q 020633 125 E--------------PYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMK-----------PSKLHL 179 (323)
Q Consensus 125 ~--------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~-----------~~~~~~ 179 (323)
. ++.+++|.++|+|+||.+++.+|...|.. ++++|..++..+...... ..+...
T Consensus 176 ~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~-LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~ 254 (405)
T d1lnsa3 176 ARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEG-LELILAEAGISSWYNYYRENGLVRSPGGFPGEDLD 254 (405)
T ss_dssp SCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHH
T ss_pred ccccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCcc-ceEEEecCccccHHHHhhcCCccccccchhhhhhh
Confidence 2 23355899999999999999999998888 999999887665311000 000000
Q ss_pred HHhhhhhhhhcccccCCccccccc-ccCChHH-HHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeC
Q 020633 180 FMYGLLFGLADTWAAMPDNKMVGK-AIKDPEK-LKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGT 257 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 257 (323)
........ .... ....... ....... ............. . ..... ......+.+|++|+|+|+|.
T Consensus 255 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d---~~w~~-~s~~~~~~~I~vP~L~i~Gw 321 (405)
T d1lnsa3 255 VLAALTYS----RNLD-GADFLKGNAEYEKRLAEMTAALDRKSGDY----N---QFWHD-RNYLINTDKVKADVLIVHGL 321 (405)
T ss_dssp HHHHHHCG----GGGS-HHHHHHHHHHHHHHHHHHHHHHCTTTCCC----C---HHHHT-TBGGGGGGGCCSEEEEEEET
T ss_pred hhhccccc----cccc-cchhhhchhhhhhccchhhhhhhhccccc----h---hhhhh-cChhhhhhcCCCCEEEEEec
Confidence 00000000 0000 0000000 0000000 0000000000000 0 00000 01235677899999999999
Q ss_pred CCcccCchhHHHHHHHcCCCC-ccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhhc
Q 020633 258 ADGVTCPTSSKLLYEKASSAD-KSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVERY 318 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 318 (323)
.|..+++..+.++++.+.... .++++-+ .+|......+ ..++.+.+.+||+.+++..
T Consensus 322 ~D~~v~~~~~~~~y~al~~~~~~~Lilgp-w~H~~~~~~~---~~d~~~~~~~wFD~~LkG~ 379 (405)
T d1lnsa3 322 QDWNVTPEQAYNFWKALPEGHAKHAFLHR-GAHIYMNSWQ---SIDFSETINAYFVAKLLDR 379 (405)
T ss_dssp TCCSSCTHHHHHHHHHSCTTCCEEEEEES-CSSCCCTTBS---SCCHHHHHHHHHHHHHTTC
T ss_pred cCCCCCHHHHHHHHHHHHhCCCcEEEEeC-CCCCCCcccc---cchHHHHHHHHHHHHhCCC
Confidence 999999888888888875322 4555545 5897642211 1226778889999998653
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.80 E-value=4.6e-19 Score=136.09 Aligned_cols=105 Identities=11% Similarity=-0.009 Sum_probs=84.1
Q ss_pred CcceEEEEecCCCCCcc-ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTG-WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
..+++|||+||++.+.. +.|..+.+.|.+.||.|+.+|+||+|.+ +.+..++++.+.++++....+ ..+
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~--------d~~~sae~la~~i~~v~~~~g--~~k 98 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN--------DTQVNTEYMVNAITALYAGSG--NNK 98 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCS--------CHHHHHHHHHHHHHHHHHHTT--SCC
T ss_pred CCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCC--------chHhHHHHHHHHHHHHHHhcc--CCc
Confidence 34567899999987643 2356789999999999999999999876 455666777777877766654 568
Q ss_pred eEEEEechhHHHHHHHhhhcCC--CceeEEEEccCccc
Q 020633 132 GFLFGESMGGAATMLMYFQSEP--NTWTGLIFSAPLFV 167 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~--~~v~~~vl~~~~~~ 167 (323)
+.|+||||||.++..++..+|+ .+|+.+|.+++...
T Consensus 99 V~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 99 LPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred eEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 9999999999999999988874 23999999998654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=3.8e-18 Score=131.70 Aligned_cols=252 Identities=12% Similarity=0.019 Sum_probs=147.1
Q ss_pred ccceeEEEcCCC-cEEEEEecCCC---CCcceEEEEecCCCCCcc-c-cHHHHHHHHhhCCcEEEEecCCCCcCCCCC--
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG-W-MFQKICISFATWGYAVFAADLLGHGRSDGI-- 100 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~-~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-- 100 (323)
+.+++.+++.|| +|.++++.|.+ +++.|+||++||+++... . ........+...++.++..+.++.......
T Consensus 6 ~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T d1qfma2 6 QTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWH 85 (280)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHH
T ss_pred EEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhh
Confidence 457788999999 99999999875 256799999999754321 1 223334445555677777776655432211
Q ss_pred -cccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHHH
Q 020633 101 -RCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 101 -~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~~ 179 (323)
...........++..................++++|.|.||..+...+...++. +++++...+.............
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 162 (280)
T d1qfma2 86 KGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDL-FGCVIAQVGVMDMLKFHKYTIG-- 162 (280)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGG-CSEEEEESCCCCTTTGGGSTTG--
T ss_pred hcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccch-hhheeeeccccchhhhcccccc--
Confidence 111112233344555555555555444566889999999999999999998887 7777777766543221110000
Q ss_pred HHhhhhhhhhcccccCCcccccccccCChHHHHH-HhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKV-IASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
.... .............. ....+..... ..........|+|++||++
T Consensus 163 ----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~s----------------~~~~~~~~~pP~LiihG~~ 210 (280)
T d1qfma2 163 ----------HAWT------TDYGCSDSKQHFEWLIKYSPLHNVK----------------LPEADDIQYPSMLLLTADH 210 (280)
T ss_dssp ----------GGGH------HHHCCTTSHHHHHHHHHHCGGGCCC----------------CCSSTTCCCCEEEEEEETT
T ss_pred ----------ccce------ecccCCCcccccccccccccccccc----------------hhhhcccCCCceEEeeccc
Confidence 0000 00000000000000 0000000000 0011122234899999999
Q ss_pred CcccCchhHHHHHHHcC---------CCCccEEEecCCCcccccCCCchhHHHHHHHHHHHHHHHHhh
Q 020633 259 DGVTCPTSSKLLYEKAS---------SADKSIKIYDGMYHSLIQGEPDENANLVLKDMREWIDERVER 317 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 317 (323)
|..||..+++++.+++. +..+++++++++||.+. .+.....+....+.+||+++++.
T Consensus 211 D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~--~~~~~~~~~~~~~~~fl~k~L~~ 276 (280)
T d1qfma2 211 DDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAG--KPTAKVIEEVSDMFAFIARCLNI 276 (280)
T ss_dssp CCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTT--CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCC--CcHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999988872 34468999999999764 12222334556788999999874
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.79 E-value=4.2e-18 Score=133.02 Aligned_cols=237 Identities=14% Similarity=0.121 Sum_probs=138.2
Q ss_pred cceeEEEcCCCcEEEEEecCCCCCcceEEEEecCCCC---CccccHHHHHHHHhh-CCcEEEEecCCCCcCCCCCcccCC
Q 020633 30 NGKKYFETPNGKLFTQSFLPLDQKVKATVYMTHGYGS---DTGWMFQKICISFAT-WGYAVFAADLLGHGRSDGIRCYLG 105 (323)
Q Consensus 30 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~ 105 (323)
.++..+...+|.|..+.|.|. ++.|+||++||+|. +.. .+..++..+++ .|+.|+++|+|.....
T Consensus 56 ~~~~~i~~~~g~i~~~iy~P~--~~~P~il~iHGGg~~~g~~~-~~~~~~~~l~~~~g~~Vv~v~Yrlap~~-------- 124 (311)
T d1jjia_ 56 VEDRTIKGRNGDIRVRVYQQK--PDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEH-------- 124 (311)
T ss_dssp EEEEEEEETTEEEEEEEEESS--SSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTS--------
T ss_pred EEEEEEeCCCCcEEEEEEcCC--CCceEEEEEcCCCCccCChh-hhhhhhhhhhhcCCcEEEEecccccccc--------
Confidence 345677777778888999986 45699999999863 333 45566666655 5999999999954322
Q ss_pred ChHHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc---CCCceeEEEEccCcccCCCCCchhhHHH
Q 020633 106 DMEKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS---EPNTWTGLIFSAPLFVIPENMKPSKLHL 179 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~---p~~~v~~~vl~~~~~~~~~~~~~~~~~~ 179 (323)
.+....+|+...++++... ..++..+++|+|+|.||.+++.++... ......+.+++.|............
T Consensus 125 ~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~--- 201 (311)
T d1jjia_ 125 KFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLL--- 201 (311)
T ss_dssp CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHH---
T ss_pred ccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCccccc---
Confidence 3445556666666666543 223356899999999999888776542 2222788889888776443221100
Q ss_pred HHhhhhhhhhcccccCCcccccccccCChHHH----HHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEe
Q 020633 180 FMYGLLFGLADTWAAMPDNKMVGKAIKDPEKL----KVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
.... .......... ............. ... ...... +...|+++++
T Consensus 202 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s----------p~~~~~-~~~pP~li~~ 251 (311)
T d1jjia_ 202 EFGE------------------GLWILDQKIMSWFSEQYFSREEDKFNP-LAS----------VIFADL-ENLPPALIIT 251 (311)
T ss_dssp HTSS------------------SCSSCCHHHHHHHHHHHCSSGGGGGCT-TTS----------GGGSCC-TTCCCEEEEE
T ss_pred cccc------------------ccccccHHHhhhhhhhccccccccccc-ccc----------hhhccc-ccCCCEEEEE
Confidence 0000 0000000000 0000000000000 000 001111 2245899999
Q ss_pred eCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHH
Q 020633 256 GTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWID 312 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~ 312 (323)
|+.|.+++ .+..+.+++. +..+++++++|++|.+....+ ....++..+.|.+||.
T Consensus 252 g~~D~l~d--~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl~ 309 (311)
T d1jjia_ 252 AEYDPLRD--EGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp EEECTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCChH--HHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHhC
Confidence 99997654 5566666653 345789999999997653333 2345667788888873
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.78 E-value=6.4e-18 Score=135.87 Aligned_cols=139 Identities=14% Similarity=0.135 Sum_probs=107.7
Q ss_pred ccceeEEEcCCC-cEEEEEecCCCCCcceEEEEecCCCCCc-------c----ccHHHHHHHHhhCCcEEEEecCCCCcC
Q 020633 29 RNGKKYFETPNG-KLFTQSFLPLDQKVKATVYMTHGYGSDT-------G----WMFQKICISFATWGYAVFAADLLGHGR 96 (323)
Q Consensus 29 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~-------~----~~~~~~~~~l~~~g~~v~~~d~~G~G~ 96 (323)
..+.+.+++.|| +|.+.+|.|.+.++.|+||+.|+++... . .........|+++||.|+.+|.||+|.
T Consensus 27 ~~~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~ 106 (385)
T d2b9va2 27 IKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYG 106 (385)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTT
T ss_pred eEeEEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccC
Confidence 345688999999 9999999998877889999988875210 0 011234567899999999999999999
Q ss_pred CCCCcccCC--------ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 97 SDGIRCYLG--------DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 97 s~~~~~~~~--------~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
|.+...... .-...++|..++++++..+.+++..+|.++|+|+||.+++.+|...++. +++++...+..+.
T Consensus 107 S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~-l~a~~~~~~~~d~ 185 (385)
T d2b9va2 107 SQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPA-LKVAAPESPMVDG 185 (385)
T ss_dssp CCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTT-EEEEEEEEECCCT
T ss_pred CCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCc-ceEEEEecccccc
Confidence 986532211 0112368999999999887666677999999999999999999988887 9999987776553
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.76 E-value=6.3e-19 Score=137.88 Aligned_cols=105 Identities=17% Similarity=0.187 Sum_probs=86.7
Q ss_pred CcceEEEEecCCCCCccc-----cHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC
Q 020633 53 KVKATVYMTHGYGSDTGW-----MFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY 127 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 127 (323)
+++.+|||+||++++... .|..+.+.|.++||+|+++|+||+|.|..... ..+++++++.++++.+.
T Consensus 6 ~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~---~~~~l~~~i~~~~~~~~----- 77 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG---RGEQLLAYVKQVLAATG----- 77 (319)
T ss_dssp CCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS---HHHHHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---cHHHHHHHHHHHHHHhC-----
Confidence 446678999999876531 36788999999999999999999998865432 56777778888877765
Q ss_pred CCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 128 RDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 128 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
.++++++||||||.++..++.++|++ |+++|+++++..
T Consensus 78 -~~~v~lvGhS~GG~~~~~~~~~~p~~-v~~vv~i~~p~~ 115 (319)
T d1cvla_ 78 -ATKVNLIGHSQGGLTSRYVAAVAPQL-VASVTTIGTPHR 115 (319)
T ss_dssp -CSCEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESCCTT
T ss_pred -CCCEEEEeccccHHHHHHHHHHCccc-cceEEEECCCCC
Confidence 34899999999999999999999999 999999987643
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.75 E-value=2e-16 Score=123.59 Aligned_cols=243 Identities=14% Similarity=0.128 Sum_probs=141.3
Q ss_pred cceeEEEcCCC-cEEEEEecCCC-CCcceEEEEecCCCC---CccccHHHHHHHHhhC-CcEEEEecCCCCcCCCCCccc
Q 020633 30 NGKKYFETPNG-KLFTQSFLPLD-QKVKATVYMTHGYGS---DTGWMFQKICISFATW-GYAVFAADLLGHGRSDGIRCY 103 (323)
Q Consensus 30 ~~~~~~~~~~g-~l~~~~~~~~~-~~~~~~vv~~HG~~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~ 103 (323)
.+...+.. +| +|..++|.|.+ .++.|+||++||++. +.. .+..++..++.+ |+.|+.+|+|.....
T Consensus 46 ~~~~~~~~-~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~a~~~~~~v~~v~Yrl~p~~------ 117 (308)
T d1u4na_ 46 VREFDMDL-PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEH------ 117 (308)
T ss_dssp EEEEEEEE-TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTS------
T ss_pred EEEEEEec-CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccc-cccchhhhhhhccccccccccccccccc------
Confidence 34455554 56 89999999875 346789999999863 334 566677777766 467888999854332
Q ss_pred CCChHHHhhcHHHHHHHHHhcC---CCCCCCeEEEEechhHHHHHHHhhhcCC---CceeEEEEccCcccCCCCCchhhH
Q 020633 104 LGDMEKVAASSLSFFKHVRDSE---PYRDLPGFLFGESMGGAATMLMYFQSEP---NTWTGLIFSAPLFVIPENMKPSKL 177 (323)
Q Consensus 104 ~~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~v~~~vl~~~~~~~~~~~~~~~~ 177 (323)
.+....+|+...++++.... .++..+++++|+|.||.+++.++....+ ..+.+..++.+.............
T Consensus 118 --~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
T d1u4na_ 118 --KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASI 195 (308)
T ss_dssp --CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHH
T ss_pred --ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchh
Confidence 44556678888888877542 3445689999999999999887765321 115666677766544322221110
Q ss_pred HHHHhhhhhhhhcccccCCcccccccccCChH-HHHHHh---cCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEE
Q 020633 178 HLFMYGLLFGLADTWAAMPDNKMVGKAIKDPE-KLKVIA---SNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLT 253 (323)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 253 (323)
... . ........ ...... ........ ..... ....... -..|+++
T Consensus 196 ~~~-~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~---------~~~~d~~-~~Pp~li 244 (308)
T d1u4na_ 196 EEN-A-------------------EGYLLTGGMSLWFLDQYLNSLEELTH-PWFSP---------VLYPDLS-GLPPAYI 244 (308)
T ss_dssp HHT-S-------------------SSSSSCHHHHHHHHHHHCSSGGGGGC-TTTCG---------GGCSCCT-TCCCEEE
T ss_pred hhc-c-------------------ccccccchhhhhhhhcccCccccccc-hhhhh---------hhchhhc-CCCCeeE
Confidence 000 0 00000000 000000 00000000 00000 0000011 1248999
Q ss_pred EeeCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccccCCC-chhHHHHHHHHHHHHHHHH
Q 020633 254 VHGTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLIQGEP-DENANLVLKDMREWIDERV 315 (323)
Q Consensus 254 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~ 315 (323)
++|+.|..+ ..++.+.+++. +..+++++++|++|.+....+ ....++..+.+.+||++.+
T Consensus 245 ~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 245 ATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp EEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred EecCcCCch--HHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 999999765 35666776663 345799999999997653222 2346678889999998876
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.68 E-value=5.7e-17 Score=123.95 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=79.7
Q ss_pred cceEEEEecCCCCCcc----ccHHHHHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCC
Q 020633 54 VKATVYMTHGYGSDTG----WMFQKICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRD 129 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~~----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 129 (323)
++-+|||+||+++... ..|..+.+.|.++||+|+++|++|+|.+. ...+++.+++.++++... .
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~------~~a~~l~~~i~~~~~~~g------~ 73 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEEIVALSG------Q 73 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH------HHHHHHHHHHHHHHHHHC------C
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH------HHHHHHHHHHHHHHHHcC------C
Confidence 3557999999987643 14778999999999999999999988542 134555566666666554 4
Q ss_pred CCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcc
Q 020633 130 LPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLF 166 (323)
Q Consensus 130 ~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~ 166 (323)
.+++++||||||.++..++..+|++ |+++|.++++.
T Consensus 74 ~~v~ligHS~GG~~~r~~~~~~p~~-v~~lv~i~tPh 109 (285)
T d1ex9a_ 74 PKVNLIGHSHGGPTIRYVAAVRPDL-IASATSVGAPH 109 (285)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGG-EEEEEEESCCT
T ss_pred CeEEEEEECccHHHHHHHHHHCCcc-ceeEEEECCCC
Confidence 4899999999999999999999999 99999998764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.68 E-value=2.6e-15 Score=115.95 Aligned_cols=141 Identities=9% Similarity=-0.017 Sum_probs=97.0
Q ss_pred cccCcccceeEEEcC-CC-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHH---HHHHHhhCCcEEEEecCCCCcCC
Q 020633 24 TSQGVRNGKKYFETP-NG-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQK---ICISFATWGYAVFAADLLGHGRS 97 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~-~g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~---~~~~l~~~g~~v~~~d~~G~G~s 97 (323)
...+++.+...+.++ .| ++.+.++.+. ++.|+|+++||.++... ..|.. +.+.+.+.|+.++.++..+.+..
T Consensus 3 ~~~~~~v~~~~~~s~~~~r~~~~~v~~p~--~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 80 (288)
T d1sfra_ 3 SRPGLPVEYLQVPSPSMGRDIKVQFQSGG--ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFY 80 (288)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEECCS--TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTT
T ss_pred CCCCCEEEEEEEECCCCCcEEEEEEeCCC--CCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCC
Confidence 455666667777665 45 7887777664 67899999999875421 13322 45677778999999998766544
Q ss_pred CCCcc--------cCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 98 DGIRC--------YLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 98 ~~~~~--------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
..... ....++. -.+.+++.++..++.++..++.+.|+|+||..|+.++.++|++ +++++.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~--~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~-f~av~~~Sg~~~~~ 157 (288)
T d1sfra_ 81 SDWYQPACGKAGCQTYKWET--FLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQ-FVYAGAMSGLLDPS 157 (288)
T ss_dssp CBCSSCEEETTEEECCBHHH--HHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCSCTT
T ss_pred ccccCcccccccccchhHHH--HHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhcccc-ccEEEEecCccccc
Confidence 32110 0112222 2334455555555555677899999999999999999999999 99999999876544
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.62 E-value=1.7e-14 Score=109.27 Aligned_cols=197 Identities=12% Similarity=0.044 Sum_probs=112.7
Q ss_pred cceeEEEc-CCC-cEEEEEecCCC---CCcceEEEEecCCCCCcc------ccHHHHHHHHhhCC-cEEEEecCCCCcCC
Q 020633 30 NGKKYFET-PNG-KLFTQSFLPLD---QKVKATVYMTHGYGSDTG------WMFQKICISFATWG-YAVFAADLLGHGRS 97 (323)
Q Consensus 30 ~~~~~~~~-~~g-~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~------~~~~~~~~~l~~~g-~~v~~~d~~G~G~s 97 (323)
.+...+.+ .+| ++.+.+|.|.+ .++.|+||++||.+++.. .........+...+ ...+.+...+.+..
T Consensus 22 ~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (255)
T d1jjfa_ 22 VVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAA 101 (255)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCC
T ss_pred EEEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccc
Confidence 34455554 467 99999999875 245699999999886532 01122233333222 22222222222222
Q ss_pred CCCccc--CCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchh
Q 020633 98 DGIRCY--LGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPS 175 (323)
Q Consensus 98 ~~~~~~--~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~ 175 (323)
...... .......++++...++... ....+..+++++|+|+||..++.++.++|+. +++++.+++.........
T Consensus 102 ~~~~~~~~~~~~~~~~~~li~~i~~~~-~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~-F~~v~~~sg~~~~~~~~~-- 177 (255)
T d1jjfa_ 102 GPGIADGYENFTKDLLNSLIPYIESNY-SVYTDREHRAIAGLSMGGGQSFNIGLTNLDK-FAYIGPISAAPNTYPNER-- 177 (255)
T ss_dssp CTTCSCHHHHHHHHHHHTHHHHHHHHS-CBCCSGGGEEEEEETHHHHHHHHHHHTCTTT-CSEEEEESCCTTSCCHHH--
T ss_pred cccccccccchHHHHHHHHHHHHHHhh-ccccccceeEeeeccchhHHHHHHHHhCCCc-ccEEEEEccCcCCccccc--
Confidence 111110 0012333344444443321 1113456799999999999999999999999 999999887653221000
Q ss_pred hHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEe
Q 020633 176 KLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVH 255 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 255 (323)
. ... ..........|+++.+
T Consensus 178 --------------------------------------~--~~~--------------------~~~~~~~~~~~~~i~~ 197 (255)
T d1jjfa_ 178 --------------------------------------L--FPD--------------------GGKAAREKLKLLFIAC 197 (255)
T ss_dssp --------------------------------------H--CTT--------------------TTHHHHHHCSEEEEEE
T ss_pred --------------------------------------c--ccc--------------------HHHHhhccCCcceEEe
Confidence 0 000 0001112356899999
Q ss_pred eCCCcccCchhHHHHHHHcC--CCCccEEEecCCCcccc
Q 020633 256 GTADGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 256 g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
|++|..++. .+.+.+.+. +-+.++.+++++||...
T Consensus 198 G~~D~~~~~--~~~~~~~L~~~g~~~~~~~~~~ggH~~~ 234 (255)
T d1jjfa_ 198 GTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN 234 (255)
T ss_dssp ETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH
T ss_pred CCCCCCchH--HHHHHHHHHHCCCCEEEEEECCCCcCHH
Confidence 999988763 455666553 34578889999999764
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.60 E-value=1.8e-14 Score=108.45 Aligned_cols=205 Identities=11% Similarity=0.067 Sum_probs=119.0
Q ss_pred cccceeEEEcC-CC-cEEEEEecCCC--CCcceEEEEecCCCCCccccHHHHHHHHhhCCc----EEEEecCCCCcCCCC
Q 020633 28 VRNGKKYFETP-NG-KLFTQSFLPLD--QKVKATVYMTHGYGSDTGWMFQKICISFATWGY----AVFAADLLGHGRSDG 99 (323)
Q Consensus 28 ~~~~~~~~~~~-~g-~l~~~~~~~~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~G~G~s~~ 99 (323)
.+.++..+.+. .| +..+++|.|.+ .++.|+||++||.+...........+.+..+|. .++.++....+....
T Consensus 13 ~~~~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~ 92 (246)
T d3c8da2 13 IPAKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAH 92 (246)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHH
T ss_pred CCcEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeeccccccccccc
Confidence 34456666665 35 88888888865 245799999999653222123344555655543 334443221111000
Q ss_pred CcccCCC-hHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCCCCCchhhHH
Q 020633 100 IRCYLGD-MEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIPENMKPSKLH 178 (323)
Q Consensus 100 ~~~~~~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~~~~~~~~~~ 178 (323)
....... .+.+.+++..+++.... ...+.+++.++|+|+||..++.++.++|+. +++++.+++..........
T Consensus 93 ~~~~~~~~~~~~~~el~~~v~~~~~-~~~d~~~~~i~G~S~GG~~al~~~~~~P~~-F~a~~~~sg~~~~~~~~~~---- 166 (246)
T d3c8da2 93 ELPCNADFWLAVQQELLPLVKVIAP-FSDRADRTVVAGQSFGGLSALYAGLHWPER-FGCVLSQSGSYWWPHRGGQ---- 166 (246)
T ss_dssp HSSSCHHHHHHHHHTHHHHHHHHSC-CCCCGGGCEEEEETHHHHHHHHHHHHCTTT-CCEEEEESCCTTTTCTTSS----
T ss_pred ccCccHHHHHHHHHHhhhHHHHhcc-cccCccceEEEecCchhHHHhhhhccCCch-hcEEEcCCcccccccCCcc----
Confidence 0000001 22233555555554322 123356899999999999999999999999 9999999986542211000
Q ss_pred HHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHHHhcCCCCCcCEEEEeeCC
Q 020633 179 LFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYIQDNFSKVTVPFLTVHGTA 258 (323)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 258 (323)
....... ...........+|+++.+|+.
T Consensus 167 ---------------------------~~~~~~~-------------------------~~~~~~~~~~~~~~~l~~G~~ 194 (246)
T d3c8da2 167 ---------------------------QEGVLLE-------------------------KLKAGEVSAEGLRIVLEAGIR 194 (246)
T ss_dssp ---------------------------SCCHHHH-------------------------HHHTTSSCCCSCEEEEEEESS
T ss_pred ---------------------------chHHHHH-------------------------HhhhhhhhccCCCeEEEecCC
Confidence 0000000 002234455678999999999
Q ss_pred CcccCchhHHHHHHHcC--CCCccEEEecCCCcccc
Q 020633 259 DGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 259 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
|..+ ...++.+.+.+. +-.+++++++| ||...
T Consensus 195 D~~~-~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~ 228 (246)
T d3c8da2 195 EPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDAL 228 (246)
T ss_dssp CHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHH
T ss_pred Ccch-hHHHHHHHHHHHHCCCCEEEEEeCC-CCChH
Confidence 9866 466788888874 23467888887 79665
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=1e-12 Score=99.80 Aligned_cols=132 Identities=10% Similarity=-0.009 Sum_probs=88.7
Q ss_pred ccceeEEEcCC-C-cEEEEEecCCCCCcceEEEEecCCCCCcc-ccHHH---HHHHHhhCCcEEEEecCCCCcC-CCCCc
Q 020633 29 RNGKKYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGYGSDTG-WMFQK---ICISFATWGYAVFAADLLGHGR-SDGIR 101 (323)
Q Consensus 29 ~~~~~~~~~~~-g-~l~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~---~~~~l~~~g~~v~~~d~~G~G~-s~~~~ 101 (323)
+.+..++.++. | .|...++.+. .|+|+++||.++... ..|.. +.+.+...++.|+.+|--..+. +....
T Consensus 3 ~~e~~~v~s~~~~r~~~~~v~~~~----~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~ 78 (267)
T d1r88a_ 3 PYENLMVPSPSMGRDIPVAFLAGG----PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQ 78 (267)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCS----SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSS
T ss_pred ceEEEEEecccCCceeeEEEECCC----CCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccc
Confidence 34667777664 4 7888877654 489999999754321 13433 5566777899999998422111 11111
Q ss_pred ccCCChHHHh-hcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 102 CYLGDMEKVA-ASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 102 ~~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
.....+++++ +++ +.++..++.++..++.+.|+||||..|+.++.++|+. +++++.+++....
T Consensus 79 ~~~~~~~tfl~~eL---~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~-F~av~~~SG~~~~ 142 (267)
T d1r88a_ 79 DGSKQWDTFLSAEL---PDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDR-FGFAGSMSGFLYP 142 (267)
T ss_dssp CTTCBHHHHHHTHH---HHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTT-EEEEEEESCCCCT
T ss_pred cccccHHHHHHHHH---HHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCccc-ccEEEEeCCccCC
Confidence 1112344433 344 4455555566678999999999999999999999999 9999999987654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.54 E-value=4.9e-13 Score=102.37 Aligned_cols=134 Identities=10% Similarity=0.038 Sum_probs=87.6
Q ss_pred CcccceeEEEcCC-C-cEEEEEecCCCCCcceEEEEecCCCCC--ccccHHH---HHHHHhhCCcEEEEecCCCCcCCCC
Q 020633 27 GVRNGKKYFETPN-G-KLFTQSFLPLDQKVKATVYMTHGYGSD--TGWMFQK---ICISFATWGYAVFAADLLGHGRSDG 99 (323)
Q Consensus 27 ~~~~~~~~~~~~~-g-~l~~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~ 99 (323)
+++.+...+.++. | +|...+.+ ++.|+|+|+||.++. .. .|.. +.+.+.+.|+.|+.+|-...+....
T Consensus 3 ~~~v~~~~~~s~~~~r~i~~~~~~----~~~p~lyllhG~~g~~d~~-~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~ 77 (280)
T d1dqza_ 3 GLPVEYLQVPSASMGRDIKVQFQG----GGPHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTD 77 (280)
T ss_dssp SSCEEEEEEEETTTTEEEEEEEEC----CSSSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSB
T ss_pred CcEEEEEEEecccCCCcceEEeeC----CCCCEEEECCCCCCCCccc-hhhhcchHHHHHHhCCcEEEEECCCCCCcCcc
Confidence 4455666666553 4 67666543 346999999998653 22 3432 5567778899999998532221110
Q ss_pred --------CcccCCChHH-HhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 100 --------IRCYLGDMEK-VAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 100 --------~~~~~~~~~~-~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
.......+++ +++++...|+ ..+.++..++.+.|+||||..|+.+|.++|++ +++++.+++.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~el~~~i~---~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~-F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 78 WYQPSQSNGQNYTYKWETFLTREMPAWLQ---ANKGVSPTGNAAVGLSMSGGSALILAAYYPQQ-FPYAASLSGFLNPS 152 (280)
T ss_dssp CSSSCTTTTCCSCCBHHHHHHTHHHHHHH---HHHCCCSSSCEEEEETHHHHHHHHHHHHCTTT-CSEEEEESCCCCTT
T ss_pred ccCCcccccCCcchhHHHHHHHHHHHHHH---HhcCCCCCceEEEEechHHHHHHHHHHhCcCc-eeEEEEecCccCcc
Confidence 0011113333 3455555554 44444567899999999999999999999999 99999999876543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=5.4e-13 Score=101.45 Aligned_cols=201 Identities=10% Similarity=0.023 Sum_probs=116.3
Q ss_pred ccceeEEEcCCC--cEEEEEecCCC---CCcceEEEEecCCCCCccccHHHHHHHHhhCCcEEEEecCCCCcCCCCC---
Q 020633 29 RNGKKYFETPNG--KLFTQSFLPLD---QKVKATVYMTHGYGSDTGWMFQKICISFATWGYAVFAADLLGHGRSDGI--- 100 (323)
Q Consensus 29 ~~~~~~~~~~~g--~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--- 100 (323)
..+.+.+...+| ++.++++.|.+ .++.|+|+++||...................++.|+++++++...-...
T Consensus 12 ~~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~ 91 (265)
T d2gzsa1 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRA 91 (265)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHH
T ss_pred eeEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCcccccc
Confidence 356778888888 68888888775 2456899999995422211111122333456899999988865321100
Q ss_pred ------------c-------ccCCChHHHhh-cHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEE
Q 020633 101 ------------R-------CYLGDMEKVAA-SSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLI 160 (323)
Q Consensus 101 ------------~-------~~~~~~~~~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~v 160 (323)
. ......+.+.+ ...+++..+......+..++.++|+|+||..++.++.+ ++. +.+++
T Consensus 92 ~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~-f~~~~ 169 (265)
T d2gzsa1 92 YDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSY-FRSYY 169 (265)
T ss_dssp HHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSS-CSEEE
T ss_pred cccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-Ccc-cCEEE
Confidence 0 00001112222 22334455555554445678999999999999987665 455 77888
Q ss_pred EccCcccCCCCCchhhHHHHHhhhhhhhhcccccCCcccccccccCChHHHHHHhcCCCCcCCCCchhHHHHHHHHHHHH
Q 020633 161 FSAPLFVIPENMKPSKLHLFMYGLLFGLADTWAAMPDNKMVGKAIKDPEKLKVIASNPRRYTGKPRVGTMREIARVCQYI 240 (323)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (323)
..+|...... .. +..... .
T Consensus 170 a~s~~~~~~~--------~~----------------------------------------------------~~~~~~-~ 188 (265)
T d2gzsa1 170 SASPSLGRGY--------DA----------------------------------------------------LLSRVT-A 188 (265)
T ss_dssp EESGGGSTTH--------HH----------------------------------------------------HHHHHH-T
T ss_pred EECCcccccc--------hh----------------------------------------------------hhhccc-c
Confidence 7776532110 00 000000 0
Q ss_pred HhcCCCCCcCEEEEeeCC--------CcccCchhHHHHHHHcC--CCCccEEEecCCCcccc
Q 020633 241 QDNFSKVTVPFLTVHGTA--------DGVTCPTSSKLLYEKAS--SADKSIKIYDGMYHSLI 292 (323)
Q Consensus 241 ~~~~~~~~~P~l~i~g~~--------D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 292 (323)
.........|+++.+|+. |..++...++.+.+.+. +.++++.+++|++|...
T Consensus 189 ~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~ 250 (265)
T d2gzsa1 189 VEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM 250 (265)
T ss_dssp SCTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH
T ss_pred ccccccCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchH
Confidence 111233456788888877 44556667777777663 35678999999999654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.46 E-value=5.1e-14 Score=105.22 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=75.4
Q ss_pred eEEEEecCCCCCcc--ccHHHHHHHHhhC--CcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCC
Q 020633 56 ATVYMTHGYGSDTG--WMFQKICISFATW--GYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLP 131 (323)
Q Consensus 56 ~~vv~~HG~~~~~~--~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 131 (323)
.|||++||++++.. ..+..+.+.+.+. |+.|+++++.....+.........+++.++.+.+.|+..... ..+
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~----~~~ 81 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKL----QQG 81 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG----TTC
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhcccc----ccc
Confidence 38999999987532 2567777777665 899999998654333211111224555566665555543222 347
Q ss_pred eEEEEechhHHHHHHHhhhcCCCceeEEEEccCccc
Q 020633 132 GFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 132 ~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~ 167 (323)
+.+|||||||.++-.++.+.+..+|..+|.++++..
T Consensus 82 v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred eeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCC
Confidence 999999999999999999988766999999887644
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.38 E-value=1.9e-10 Score=87.52 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=84.6
Q ss_pred cccceeEEEcCCCcEEEEEecCCC---CCcceEEEEecCCCCCcccc------HHHHHHHH----hhCCcEEEEecCCCC
Q 020633 28 VRNGKKYFETPNGKLFTQSFLPLD---QKVKATVYMTHGYGSDTGWM------FQKICISF----ATWGYAVFAADLLGH 94 (323)
Q Consensus 28 ~~~~~~~~~~~~g~l~~~~~~~~~---~~~~~~vv~~HG~~~~~~~~------~~~~~~~l----~~~g~~v~~~d~~G~ 94 (323)
-..+...++..+|+..+.+|.|++ +++.|+|+++||.+++.... ...+...+ ....+.|+.++..+.
T Consensus 25 g~v~~~~~~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 104 (273)
T d1wb4a1 25 GRIVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG 104 (273)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCST
T ss_pred CeEEEEEEecCCCeEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCC
Confidence 355777888888866888899875 24569999999998654211 12222332 223578888887654
Q ss_pred cCCCCCcccCCChHHHhhcHHHHHHHHHh---------cCCCCCCCeEEEEechhHHHHHHHhhhcCCCceeEEEEccCc
Q 020633 95 GRSDGIRCYLGDMEKVAASSLSFFKHVRD---------SEPYRDLPGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPL 165 (323)
Q Consensus 95 G~s~~~~~~~~~~~~~~~d~~~~l~~l~~---------~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~ 165 (323)
+..... .......++...++..-. ....+..++.+.|+|+||.+++.+|.++|+. +++++.+++.
T Consensus 105 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~-f~a~~~~sg~ 178 (273)
T d1wb4a1 105 NCTAQN-----FYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDY-VAYFMPLSGD 178 (273)
T ss_dssp TCCTTT-----HHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTT-CCEEEEESCC
T ss_pred CCcccc-----chhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCc-ceEEEEeCcc
Confidence 322211 112222332222221100 0012356899999999999999999999999 9999999876
Q ss_pred cc
Q 020633 166 FV 167 (323)
Q Consensus 166 ~~ 167 (323)
..
T Consensus 179 ~~ 180 (273)
T d1wb4a1 179 YW 180 (273)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.35 E-value=1.7e-10 Score=88.08 Aligned_cols=136 Identities=15% Similarity=0.117 Sum_probs=82.3
Q ss_pred ceeEEEcC-CC-cEEEEEecCCC--------CCcceEEEEecCCCCCccccHHH---HHHHHhhCCcEEEEecCCCC---
Q 020633 31 GKKYFETP-NG-KLFTQSFLPLD--------QKVKATVYMTHGYGSDTGWMFQK---ICISFATWGYAVFAADLLGH--- 94 (323)
Q Consensus 31 ~~~~~~~~-~g-~l~~~~~~~~~--------~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~--- 94 (323)
.+..+.+. -| +..+.+|.|++ .++.|+|+++||.+++.. .|.. +.+...+.+..|+.++....
T Consensus 15 ~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~ 93 (299)
T d1pv1a_ 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDE 93 (299)
T ss_dssp EEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEECCSSCCSTT
T ss_pred EEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHH-HHHHhhhHHHHHHHcCCceecCCCcccccc
Confidence 44455554 34 88888888864 134699999999988765 4532 33444455788888874321
Q ss_pred -------------cCCCCCcc------cCCChHH-HhhcHHHHHHHHHhcCC----CCCCCeEEEEechhHHHHHHHhhh
Q 020633 95 -------------GRSDGIRC------YLGDMEK-VAASSLSFFKHVRDSEP----YRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 95 -------------G~s~~~~~------~~~~~~~-~~~d~~~~l~~l~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
+.+..... ....+++ +++++..+|+..-.... .+..+..|.|+||||.-|+.+|.+
T Consensus 94 ~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~ 173 (299)
T d1pv1a_ 94 VANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLK 173 (299)
T ss_dssp SCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHH
T ss_pred cCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHH
Confidence 11110000 0012233 34556666554432111 012468999999999999999976
Q ss_pred --cCCCceeEEEEccCcccC
Q 020633 151 --SEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 151 --~p~~~v~~~vl~~~~~~~ 168 (323)
+|++ +.++...++....
T Consensus 174 ~~~p~~-f~~~~s~s~~~~~ 192 (299)
T d1pv1a_ 174 GYSGKR-YKSCSAFAPIVNP 192 (299)
T ss_dssp TGGGTC-CSEEEEESCCCCS
T ss_pred hcCCCc-eEEEeeccCcCCc
Confidence 5788 8888888876543
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.25 E-value=5.5e-12 Score=96.42 Aligned_cols=113 Identities=13% Similarity=0.120 Sum_probs=77.1
Q ss_pred CcceEEEEecCCCCCccc-cHHHHHHHH-hhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGW-MFQKICISF-ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~-~~~~~~~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|++|++|||.++... .+..+...+ ...++.||++|+.... +..-...........+.+..+|+.+....+.+.+
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a-~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGS-QTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHH-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecccc-CcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 458999999999866432 234445444 4446999999997532 2111111113455567778888877666555577
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVI 168 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~ 168 (323)
+++|||||+||.+|-.+.. +..+ +..++.+.|+...
T Consensus 147 ~vhlIGhSLGAhvAG~aG~-~~~~-l~rItgLDPA~P~ 182 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAGS-RTPG-LGRITGLDPVEAS 182 (337)
T ss_dssp GEEEEEETHHHHHHHHHHH-TSTT-CCEEEEESCCCTT
T ss_pred heEEEeecHHHhhhHHHHH-hhcc-ccceeccCCCccc
Confidence 9999999999999976554 4455 9999999887654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.21 E-value=1.9e-11 Score=93.27 Aligned_cols=115 Identities=13% Similarity=0.048 Sum_probs=80.7
Q ss_pred CcceEEEEecCCCCCccc-cHHHHHHHH-hhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCC
Q 020633 53 KVKATVYMTHGYGSDTGW-MFQKICISF-ATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDL 130 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~~~~-~~~~~~~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 130 (323)
..+|++|++|||.++... .+..+...+ ....+.||++|+....... -...........+.+..+|+.+....+.+.+
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~-Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE-YTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccc-hHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 468999999999866432 334444444 4457999999997543211 0001113455667777888877665555577
Q ss_pred CeEEEEechhHHHHHHHhhhcCCCceeEEEEccCcccCC
Q 020633 131 PGFLFGESMGGAATMLMYFQSEPNTWTGLIFSAPLFVIP 169 (323)
Q Consensus 131 ~~~l~G~S~Gg~~a~~~a~~~p~~~v~~~vl~~~~~~~~ 169 (323)
+++|||||+||.+|-.+....+.+ +..++.+.|+...-
T Consensus 147 ~vhlIGhSLGAhiaG~ag~~l~~k-igrItgLDPA~P~F 184 (338)
T d1bu8a2 147 NVHLIGHSLGAHVVGEAGRRLEGH-VGRITGLDPAEPCF 184 (338)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTC-SSEEEEESCBCTTT
T ss_pred eeEEEeccHHHHHHHHHHHhhccc-cccccccccCcCcc
Confidence 999999999999999988887777 99999999876543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=4.6e-10 Score=91.73 Aligned_cols=135 Identities=17% Similarity=0.121 Sum_probs=94.4
Q ss_pred ceeEEEcCCC-cEEEEEecCCCC-CcceEEEEecCCCCCccccHHHHHHH------------------HhhCCcEEEEec
Q 020633 31 GKKYFETPNG-KLFTQSFLPLDQ-KVKATVYMTHGYGSDTGWMFQKICIS------------------FATWGYAVFAAD 90 (323)
Q Consensus 31 ~~~~~~~~~g-~l~~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~------------------l~~~g~~v~~~d 90 (323)
-.-++...++ .|+|+.+...+. ..+|++|++-|++|.++ .+-.+.+. +.+. ..++-+|
T Consensus 22 ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~-anllfID 99 (452)
T d1ivya_ 22 YSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVLYLE 99 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGGS-SEEEEEC
T ss_pred eeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCcEEcCCCCeeccCCcchhcc-cCEEEEe
Confidence 3456777778 999999987642 45799999999998877 66444321 1122 5899999
Q ss_pred CC-CCcCCCCCc-ccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhh---cCCCceeEEEEccC
Q 020633 91 LL-GHGRSDGIR-CYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQ---SEPNTWTGLIFSAP 164 (323)
Q Consensus 91 ~~-G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~---~p~~~v~~~vl~~~ 164 (323)
.| |.|.|.... ....+..+.+.|+.++++..-...+ ....+++|.|.|+||..+-.+|.. .+..+++++++.++
T Consensus 100 qPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng 179 (452)
T d1ivya_ 100 SPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp CSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred cCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCC
Confidence 86 999986432 2233566677777666655444432 335689999999999988777654 34445999999998
Q ss_pred ccc
Q 020633 165 LFV 167 (323)
Q Consensus 165 ~~~ 167 (323)
..+
T Consensus 180 ~~d 182 (452)
T d1ivya_ 180 LSS 182 (452)
T ss_dssp CSB
T ss_pred ccC
Confidence 765
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.13 E-value=1.7e-09 Score=87.27 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=93.4
Q ss_pred eeEEEcCC-C-cEEEEEecCCC-CCcceEEEEecCCCCCccccHHHHHHH-----------------HhhCCcEEEEecC
Q 020633 32 KKYFETPN-G-KLFTQSFLPLD-QKVKATVYMTHGYGSDTGWMFQKICIS-----------------FATWGYAVFAADL 91 (323)
Q Consensus 32 ~~~~~~~~-g-~l~~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~-----------------l~~~g~~v~~~d~ 91 (323)
.-++...+ + .|+|+.+...+ ...+|+||++-|++|.++ .+-.+.+. +.+. ..++.+|.
T Consensus 18 sGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS-~~g~~~e~GP~~i~~~~~~~~N~~sW~~~-anllfiD~ 95 (421)
T d1wpxa1 18 TGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFELGPSSIGPDLKPIGNPYSWNSN-ATVIFLDQ 95 (421)
T ss_dssp EEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSCEEECTTCGGGS-SEEEEECC
T ss_pred eeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEECCCCccccCCcccccc-cCEEEEec
Confidence 44566654 5 89999887754 356799999999999877 56444421 1222 58999995
Q ss_pred C-CCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCC---CCCCeEEEEechhHHHHHHHhhhc-----CCCceeEEEEc
Q 020633 92 L-GHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPY---RDLPGFLFGESMGGAATMLMYFQS-----EPNTWTGLIFS 162 (323)
Q Consensus 92 ~-G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~v~~~vl~ 162 (323)
| |.|.|-.......+....++|+.++++..-...+. ...+++|.|-|+||..+-.+|.+- +..+++++++.
T Consensus 96 PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iG 175 (421)
T d1wpxa1 96 PVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIG 175 (421)
T ss_dssp STTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEE
T ss_pred CCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEec
Confidence 5 99999643333446677778888887766555431 245899999999999887777541 22348899998
Q ss_pred cCccc
Q 020633 163 APLFV 167 (323)
Q Consensus 163 ~~~~~ 167 (323)
++..+
T Consensus 176 ng~~d 180 (421)
T d1wpxa1 176 NGLTD 180 (421)
T ss_dssp SCCCC
T ss_pred CCccc
Confidence 88665
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.96 E-value=6.8e-10 Score=84.91 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=38.8
Q ss_pred CCcCEEEEeeCCCcccCchhHHHHHHHcCC----CCccEEEecCCCccccc
Q 020633 247 VTVPFLTVHGTADGVTCPTSSKLLYEKASS----ADKSIKIYDGMYHSLIQ 293 (323)
Q Consensus 247 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ 293 (323)
...|+++++|++|..|++..++.+.+.+.. .+++++..+++||.+.-
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 367999999999999999999999888742 24567788999998864
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.87 E-value=1.5e-09 Score=84.91 Aligned_cols=105 Identities=12% Similarity=-0.016 Sum_probs=74.5
Q ss_pred cceEEEEecCCCCCc------cccHHH----HHHHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHh
Q 020633 54 VKATVYMTHGYGSDT------GWMFQK----ICISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRD 123 (323)
Q Consensus 54 ~~~~vv~~HG~~~~~------~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 123 (323)
.+-+|||+||+.+-. -.+|.. +.+.|.+.|+.|++......+ +.++-++++...|+....
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~----------S~~~RA~eL~~~I~~~~~ 75 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS----------SNWDRACEAYAQLVGGTV 75 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB----------CHHHHHHHHHHHHHCEEE
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc----------CHHHHHHHHHHHHhhhhh
Confidence 356899999986431 124543 788899999999999875332 677777888888775433
Q ss_pred cCCC-----------------------CCCCeEEEEechhHHHHHHHhhhcC-------------------------CCc
Q 020633 124 SEPY-----------------------RDLPGFLFGESMGGAATMLMYFQSE-------------------------PNT 155 (323)
Q Consensus 124 ~~~~-----------------------~~~~~~l~G~S~Gg~~a~~~a~~~p-------------------------~~~ 155 (323)
+++. ...||.||||||||..+-.++...+ +.
T Consensus 76 d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 154 (388)
T d1ku0a_ 76 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRF- 154 (388)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC-
T ss_pred hhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcc-
Confidence 3210 1248999999999999888776432 35
Q ss_pred eeEEEEccCcccCC
Q 020633 156 WTGLIFSAPLFVIP 169 (323)
Q Consensus 156 v~~~vl~~~~~~~~ 169 (323)
|+.|+.++++..-.
T Consensus 155 V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 155 VLSVTTIATPHDGT 168 (388)
T ss_dssp EEEEEEESCCTTCC
T ss_pred eEEEEeccCCCCCc
Confidence 99999999876544
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.77 E-value=2.1e-07 Score=75.96 Aligned_cols=125 Identities=17% Similarity=0.113 Sum_probs=81.6
Q ss_pred cEEEEEecCCCC---CcceEEEEecCCCCCccccHHHHHH-----------------HHhhCCcEEEEecCC-CCcCCCC
Q 020633 41 KLFTQSFLPLDQ---KVKATVYMTHGYGSDTGWMFQKICI-----------------SFATWGYAVFAADLL-GHGRSDG 99 (323)
Q Consensus 41 ~l~~~~~~~~~~---~~~~~vv~~HG~~~~~~~~~~~~~~-----------------~l~~~g~~v~~~d~~-G~G~s~~ 99 (323)
.++++.+...+. ..+|+||++-|++|.++ .+..+.+ .+.+. ..++.+|.| |.|.|-.
T Consensus 50 ~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS-~~g~f~E~GP~~v~~~~~l~~Np~SWn~~-an~lfIDqPvGvGfSy~ 127 (483)
T d1ac5a_ 50 EYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISK-GDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp EEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGT-SEEEEECCSTTSTTCSS
T ss_pred eEEEEEEEecCCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCeEECCCCceeeCCCccccc-CCEEEEeCCCCcCeeec
Confidence 677777765432 12599999999998876 5533321 01122 589999976 8898853
Q ss_pred Cc---------ccCCChHHHhhcHHHHHHHHHhcCC-CCCCCeEEEEechhHHHHHHHhhhc-----------CCCceeE
Q 020633 100 IR---------CYLGDMEKVAASSLSFFKHVRDSEP-YRDLPGFLFGESMGGAATMLMYFQS-----------EPNTWTG 158 (323)
Q Consensus 100 ~~---------~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~-----------p~~~v~~ 158 (323)
.. ....+.++.+.++..+++..-...+ ....+++|.|.|+||..+-.+|..- +..++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkG 207 (483)
T d1ac5a_ 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred CCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCccccee
Confidence 21 1223556677777777766544332 1245899999999998877776542 1224899
Q ss_pred EEEccCccc
Q 020633 159 LIFSAPLFV 167 (323)
Q Consensus 159 ~vl~~~~~~ 167 (323)
+.+.++..+
T Consensus 208 i~IGNg~~d 216 (483)
T d1ac5a_ 208 LLIGNGWID 216 (483)
T ss_dssp EEEEEECCC
T ss_pred eeecCCccC
Confidence 988877654
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.51 E-value=1.8e-07 Score=76.71 Aligned_cols=124 Identities=16% Similarity=0.040 Sum_probs=77.1
Q ss_pred cEEEEEecCCCC-CcceEEEEecCCCCC---ccccHHHHHHHHhhCCcEEEEecCC----CCcC-CCCCcccCCChHHHh
Q 020633 41 KLFTQSFLPLDQ-KVKATVYMTHGYGSD---TGWMFQKICISFATWGYAVFAADLL----GHGR-SDGIRCYLGDMEKVA 111 (323)
Q Consensus 41 ~l~~~~~~~~~~-~~~~~vv~~HG~~~~---~~~~~~~~~~~l~~~g~~v~~~d~~----G~G~-s~~~~~~~~~~~~~~ 111 (323)
=|+..+|.|... ++.|++|+|||.+.. ...........+.+.+..|+++++| |+=. +...... .-.--.
T Consensus 81 CL~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~--~gN~Gl 158 (483)
T d1qe3a_ 81 CLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY--SDNLGL 158 (483)
T ss_dssp CCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTS--CSCHHH
T ss_pred CCEEEEEECCCCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhcccccccccc--cccccc
Confidence 366667777653 457999999998632 2211111223344457999999999 3321 1111111 112334
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
.|...+|++++.. .+.|+.+|.|+|||.||..+..++... ... ++++|+.++...
T Consensus 159 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gL-F~raI~~SGs~~ 218 (483)
T d1qe3a_ 159 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGL-FQKAIMESGASR 218 (483)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTS-CSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCc-ceeeccccCCcc
Confidence 6777777777654 345677999999999999887766542 235 899999887543
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.39 E-value=9.2e-07 Score=73.40 Aligned_cols=122 Identities=16% Similarity=0.053 Sum_probs=75.3
Q ss_pred EEEEEecCCCC-CcceEEEEecCCCCC----ccccHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHhh
Q 020633 42 LFTQSFLPLDQ-KVKATVYMTHGYGSD----TGWMFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 42 l~~~~~~~~~~-~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~ 112 (323)
|+..+|.|... ++.|++|+|||++.. ....+. ....+++.+..||++++| |+-........ +-..-..
T Consensus 92 L~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~--~gN~Gl~ 168 (532)
T d1ea5a_ 92 LYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYN-GKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEA--PGNVGLL 168 (532)
T ss_dssp CEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGC-THHHHHHHTCEEEECCCCCHHHHHCCCTTCSSS--CSCHHHH
T ss_pred CEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccC-cchhhcccCccEEEEeeccccccccccccccCC--CCcccch
Confidence 55566777643 467999999998622 111222 222344568999999999 33222211111 1122346
Q ss_pred cHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 113 SSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 113 d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
|...+|++++.. .+.|+.+|.|+|+|.||..+..++.. .... ++++|+.++...
T Consensus 169 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~l-F~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 169 DQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDL-FRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTT-CSEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhh-hhhheeeccccc
Confidence 777777777653 34567799999999999887666554 1234 888888776543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=1.2e-06 Score=72.67 Aligned_cols=122 Identities=17% Similarity=0.112 Sum_probs=73.8
Q ss_pred EEEEEecCCCC-CcceEEEEecCCCCC----ccccHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHhh
Q 020633 42 LFTQSFLPLDQ-KVKATVYMTHGYGSD----TGWMFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 42 l~~~~~~~~~~-~~~~~vv~~HG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~ 112 (323)
|+..+|.|... ++.|++|+|||++.. ....+.. ....++.+..|+++++| |+-........ +-..-..
T Consensus 90 L~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~-~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl~ 166 (526)
T d1p0ia_ 90 LYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDG-KFLARVERVIVVSMNYRVGALGFLALPGNPEA--PGNMGLF 166 (526)
T ss_dssp CEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCT-HHHHHHHCCEEEEECCCCHHHHHCCCTTCTTS--CSCHHHH
T ss_pred CEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCc-cccccccceeEEecccccccccccCCCCcccc--ccccccc
Confidence 55666667653 456999999998732 1112221 11223457999999999 22221111111 2223346
Q ss_pred cHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 113 SSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 113 d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
|...+|++++.. .+.|+.+|.|+|+|.||..+..++.. .... ++++|+.++...
T Consensus 167 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~l-f~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 167 DQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSL-FTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGG-CSEEEEESCCTT
T ss_pred chhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhh-hhhhhccccccc
Confidence 777777777653 34567799999999999987655433 2234 788888776544
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.33 E-value=2.8e-06 Score=70.65 Aligned_cols=122 Identities=13% Similarity=0.062 Sum_probs=75.3
Q ss_pred EEEEEecCCC--CCcceEEEEecCCCCC---c-cccHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHh
Q 020633 42 LFTQSFLPLD--QKVKATVYMTHGYGSD---T-GWMFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVA 111 (323)
Q Consensus 42 l~~~~~~~~~--~~~~~~vv~~HG~~~~---~-~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 111 (323)
|+..+|.|.. .++.|++|+|||++.. . ...+... ...++.+..|+++++| |+-.+...... +-..-.
T Consensus 97 L~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~-~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl 173 (542)
T d2ha2a1 97 LYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGR-FLAQVEGAVLVSMNYRVGTFGFLALPGSREA--PGNVGL 173 (542)
T ss_dssp CEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTH-HHHHHHCCEEEEECCCCHHHHHCCCTTCSSC--CSCHHH
T ss_pred CEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCch-hhhhhccceeEeeeeeccceeeecccccccC--CCcCCc
Confidence 5555566643 2456999999998632 2 2122221 1223457999999999 44222211111 112234
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--CCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--EPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~~v~~~vl~~~~~~ 167 (323)
.|...+|++++.. .+.|+.+|.|+|+|.||..+..++... ... +.++|+.++...
T Consensus 174 ~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~L-F~~aI~~SG~~~ 233 (542)
T d2ha2a1 174 LDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSL-FHRAVLQSGTPN 233 (542)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTT-CSEEEEESCCSS
T ss_pred ccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHH-hhhheeeccccC
Confidence 6777777777753 345677999999999999887766542 234 888888776543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=1.3e-06 Score=72.49 Aligned_cols=120 Identities=15% Similarity=0.124 Sum_probs=75.0
Q ss_pred EEEEEecCCC---CCcceEEEEecCCCCCc--cccHHHHHHHHhhCCcEEEEecCC----CCcCCCCCcccCCChHHHhh
Q 020633 42 LFTQSFLPLD---QKVKATVYMTHGYGSDT--GWMFQKICISFATWGYAVFAADLL----GHGRSDGIRCYLGDMEKVAA 112 (323)
Q Consensus 42 l~~~~~~~~~---~~~~~~vv~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~ 112 (323)
|+..+|.|.+ .++.|++|+|||++... ...+.. ...++.++..||++++| |+-.+. .... .-..-..
T Consensus 97 L~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRLg~~GFl~~~-~~~~--~gN~Gl~ 172 (532)
T d2h7ca1 97 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGFFSTG-DEHS--RGNWGHL 172 (532)
T ss_dssp CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHHCCCS-STTC--CCCHHHH
T ss_pred CEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeeccCCCcccccc-cccc--ccccccH
Confidence 5556677753 23469999999986321 112221 22345668999999999 332221 1111 1122346
Q ss_pred cHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCcc
Q 020633 113 SSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLF 166 (323)
Q Consensus 113 d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~ 166 (323)
|...+|++++.. .+.|+.+|.|+|+|.||..+..++.. .... ++++|+.++..
T Consensus 173 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~L-F~raI~~SG~~ 230 (532)
T d2h7ca1 173 DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL-FHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTS-CSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCc-chhhhhhcccc
Confidence 777777777653 34567799999999999887666553 2334 88899887643
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.20 E-value=4.4e-06 Score=69.24 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=72.7
Q ss_pred EEEEEecCCC---CCcceEEEEecCCCCCc--cccH--HHHH--HHHhhCCcEEEEecCC----CCcCCCCCcccCCChH
Q 020633 42 LFTQSFLPLD---QKVKATVYMTHGYGSDT--GWMF--QKIC--ISFATWGYAVFAADLL----GHGRSDGIRCYLGDME 108 (323)
Q Consensus 42 l~~~~~~~~~---~~~~~~vv~~HG~~~~~--~~~~--~~~~--~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~ 108 (323)
|+..+|.|.. .++.|++|+|||.+... ...| ..+. ..+..++..||++++| |+-...... ....-.
T Consensus 98 L~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~-~~~~gN 176 (534)
T d1llfa_ 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIK-AEGSGN 176 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHH-HHTCTT
T ss_pred CEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccc-cccccc
Confidence 5666677643 25689999999987321 1011 2332 2345678999999999 222111000 000111
Q ss_pred HHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhh-hc----C---CCceeEEEEccCcc
Q 020633 109 KVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYF-QS----E---PNTWTGLIFSAPLF 166 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~-~~----p---~~~v~~~vl~~~~~ 166 (323)
.-..|...+|++++.. .+.|+.+|.|+|+|.||..+..... .. | .. ++++|+.++..
T Consensus 177 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gL-F~raI~qSGs~ 244 (534)
T d1llfa_ 177 AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPL-FRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEES-CSEEEEESCCS
T ss_pred cchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhh-hhhhhhccCcc
Confidence 2345777777777754 3356779999999999986544332 21 1 23 88888888643
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.19 E-value=2.9e-06 Score=70.07 Aligned_cols=124 Identities=14% Similarity=0.062 Sum_probs=73.0
Q ss_pred EEEEEecCCC---CCcceEEEEecCCCCC---c-cccHHHHHHHHhhCCcEEEEecCCC--CcCCC-CCcccCCChHHHh
Q 020633 42 LFTQSFLPLD---QKVKATVYMTHGYGSD---T-GWMFQKICISFATWGYAVFAADLLG--HGRSD-GIRCYLGDMEKVA 111 (323)
Q Consensus 42 l~~~~~~~~~---~~~~~~vv~~HG~~~~---~-~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~-~~~~~~~~~~~~~ 111 (323)
|+..+|.|.. .++.|++|+|||++.. . .+.+..... ..+.+..|+++++|- +|.-. ........-..-.
T Consensus 81 L~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~-~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl 159 (517)
T d1ukca_ 81 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQ-ASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGL 159 (517)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHH-HTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHH
T ss_pred CEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhh-hhccccceEEEEecccceeecCccccccccccchhH
Confidence 5556666653 2456999999998632 2 222233222 234568899999992 12111 0000001113334
Q ss_pred hcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh----cCCCceeEEEEccCccc
Q 020633 112 ASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ----SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 112 ~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~~v~~~vl~~~~~~ 167 (323)
.|...+|++++.. .+.|+.+|.|+|+|.||..+...+.. .... ++++|+.++...
T Consensus 160 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gL-F~raI~qSg~~~ 221 (517)
T d1ukca_ 160 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGL-FIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSS-CSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccc-cceeeecccccc
Confidence 6777777777654 34567799999999999877544332 1235 889998887543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.16 E-value=1.9e-06 Score=71.55 Aligned_cols=122 Identities=15% Similarity=0.061 Sum_probs=72.8
Q ss_pred EEEEEecCCC---CCcceEEEEecCCCCCcc--cc--HHHH-HHHH-hhCCcEEEEecCC----CCcCCCCCcccCCChH
Q 020633 42 LFTQSFLPLD---QKVKATVYMTHGYGSDTG--WM--FQKI-CISF-ATWGYAVFAADLL----GHGRSDGIRCYLGDME 108 (323)
Q Consensus 42 l~~~~~~~~~---~~~~~~vv~~HG~~~~~~--~~--~~~~-~~~l-~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~ 108 (323)
|+..+|.|.+ .++.|++|+|||.+...+ .. ...+ ...+ +..+..||++++| |+-.+...... ..-.
T Consensus 106 L~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~-~~gN 184 (544)
T d1thga_ 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAE-GNTN 184 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHH-TCTT
T ss_pred CEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhcc-cccc
Confidence 5566666643 245799999999873321 01 1222 2233 4568999999999 33221100000 0112
Q ss_pred HHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhhc--------CCCceeEEEEccCc
Q 020633 109 KVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQS--------EPNTWTGLIFSAPL 165 (323)
Q Consensus 109 ~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~v~~~vl~~~~ 165 (323)
.-..|...+|++++.. .+.|+.+|.|+|+|.||..+..++... ... ++++|+.++.
T Consensus 185 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gL-F~raI~qSG~ 251 (544)
T d1thga_ 185 AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKL-FHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEES-CSEEEEESCC
T ss_pred HHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhh-hccccccccc
Confidence 2346777777777654 345677999999999998766554421 124 8889988764
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.96 E-value=1.5e-05 Score=66.49 Aligned_cols=112 Identities=12% Similarity=-0.088 Sum_probs=67.1
Q ss_pred CcceEEEEecCCCCC----ccccHHHHHHHHh-hCCcEEEEecCC----CCcCCCC---C-cccCCChHHHhhcHHHHHH
Q 020633 53 KVKATVYMTHGYGSD----TGWMFQKICISFA-TWGYAVFAADLL----GHGRSDG---I-RCYLGDMEKVAASSLSFFK 119 (323)
Q Consensus 53 ~~~~~vv~~HG~~~~----~~~~~~~~~~~l~-~~g~~v~~~d~~----G~G~s~~---~-~~~~~~~~~~~~d~~~~l~ 119 (323)
++.|++|+|||++.. ....+.. ..|+ +.+..|+++++| |+=.... . .....+-..-..|...+|+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 456999999998632 1112222 2333 335888999999 2211100 0 0000112333477888888
Q ss_pred HHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCccc
Q 020633 120 HVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPLFV 167 (323)
Q Consensus 120 ~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~~~ 167 (323)
+++.. .+.|+.+|.|+|+|.||..+..++.. .... ++++|+.++...
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~l-f~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGL-VKRGMMQSGTMN 266 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTS-CCEEEEESCCTT
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeecccccccc-ccccceeccccc
Confidence 88765 33567799999999999987655543 2234 888888765443
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.94 E-value=1.4e-05 Score=66.76 Aligned_cols=118 Identities=17% Similarity=0.095 Sum_probs=70.6
Q ss_pred EEEEEecCCC----CCcceEEEEecCCCCCcc----------ccHHHHHHHHhh-CCcEEEEecCC----CCcCCCCCcc
Q 020633 42 LFTQSFLPLD----QKVKATVYMTHGYGSDTG----------WMFQKICISFAT-WGYAVFAADLL----GHGRSDGIRC 102 (323)
Q Consensus 42 l~~~~~~~~~----~~~~~~vv~~HG~~~~~~----------~~~~~~~~~l~~-~g~~v~~~d~~----G~G~s~~~~~ 102 (323)
|+..+|.|.. .++.|++|+|||++-..+ ..|. ...|+. .+..|+++++| |+-.+ ....
T Consensus 81 L~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~d--g~~la~~~~vIvVt~nYRlg~~GFl~~-~~~~ 157 (579)
T d2bcea_ 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATRGNVIVVTFNYRVGPLGFLST-GDSN 157 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGC--CHHHHHHHTCEEEEECCCCHHHHHCCC-SSTT
T ss_pred CEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccc--hhhhhccCCEEEEeecccccccccccc-cccC
Confidence 5555566532 135699999999863211 0121 123333 35999999999 33111 1111
Q ss_pred cCCChHHHhhcHHHHHHHHHhc---CCCCCCCeEEEEechhHHHHHHHhhh--cCCCceeEEEEccCc
Q 020633 103 YLGDMEKVAASSLSFFKHVRDS---EPYRDLPGFLFGESMGGAATMLMYFQ--SEPNTWTGLIFSAPL 165 (323)
Q Consensus 103 ~~~~~~~~~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~v~~~vl~~~~ 165 (323)
. .-.--..|...+|++++.. .+.|+.+|.|+|+|.||..+..++.. .... ++++|+.++.
T Consensus 158 ~--~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gL-F~raI~~SGs 222 (579)
T d2bcea_ 158 L--PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGL-IKRAISQSGV 222 (579)
T ss_dssp C--CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTT-CSEEEEESCC
T ss_pred C--CccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCc-cccceeccCC
Confidence 1 1122346666777776654 34567799999999999887765543 2345 8899988754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=97.48 E-value=0.0015 Score=45.35 Aligned_cols=86 Identities=14% Similarity=0.048 Sum_probs=56.6
Q ss_pred HHHhhCCcEEEEecCCCCcCCCCCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhhcC----
Q 020633 77 ISFATWGYAVFAADLLGHGRSDGIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQSE---- 152 (323)
Q Consensus 77 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---- 152 (323)
..+...+..+..++++..........+..+...-+.++...+.....+.+ ..+++|+|+|.|+.++-.++...+
T Consensus 45 ~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP--~tkiVL~GYSQGA~V~~~~~~~l~~~~~ 122 (197)
T d1cexa_ 45 SAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCP--DATLIAGGYSQGAALAAASIEDLDSAIR 122 (197)
T ss_dssp HHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHHSCHHHH
T ss_pred HhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCC--CCeEEEeeeccccHhhhcccccCChhhh
Confidence 33333445666666553211111111222455566788888888888876 779999999999999988877543
Q ss_pred CCceeEEEEccCc
Q 020633 153 PNTWTGLIFSAPL 165 (323)
Q Consensus 153 ~~~v~~~vl~~~~ 165 (323)
++ |.++++++-+
T Consensus 123 ~~-V~avvlfGDP 134 (197)
T d1cexa_ 123 DK-IAGTVLFGYT 134 (197)
T ss_dssp TT-EEEEEEESCT
T ss_pred hh-EEEEEEEeCC
Confidence 45 9999998744
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=97.27 E-value=0.00037 Score=51.13 Aligned_cols=43 Identities=23% Similarity=0.211 Sum_probs=33.2
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+....+++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 103 ~~~~i~~~i~~~i~~~~~~~~--~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 103 GWISVQDQVESLVKQQASQYP--DYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCC--CcceEEeccchhHHHHHHHHHH
Confidence 345555677777777777765 5689999999999999887765
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=97.15 E-value=0.00025 Score=52.18 Aligned_cols=43 Identities=21% Similarity=0.361 Sum_probs=32.9
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+....+++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 111 ~~~~~~~~i~~~v~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 111 SYEQVVNDYFPVVQEQLTAHP--TYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--TCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCC--CceEEEEecccchHHHHHHHHH
Confidence 455566677777777666655 5689999999999999888764
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=97.15 E-value=0.00061 Score=50.22 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=33.4
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+....+++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 116 ~~~~~~~~v~~~v~~~~~~~~--~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 116 SWRSVADTLRQKVEDAVREHP--DYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CcceeeeccchHHHHHHHHHHH
Confidence 345556677777777766665 5689999999999999988875
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=97.11 E-value=0.00025 Score=52.44 Aligned_cols=43 Identities=21% Similarity=0.272 Sum_probs=33.3
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.....++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 115 ~~~~~~~~i~~~i~~~~~~~~--~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 115 SWKLVRDDIIKELKEVVAQNP--NYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEeccchHHHHHHHHHHH
Confidence 345556677777777766654 6689999999999999988765
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=97.03 E-value=0.00038 Score=51.26 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=31.8
Q ss_pred ChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhhh
Q 020633 106 DMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYFQ 150 (323)
Q Consensus 106 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 150 (323)
.+.....++...++.+..+++ ..++++.|||+||.+|..++..
T Consensus 110 ~~~~v~~~i~~~i~~~~~~~~--~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 110 SYGEVQNELVATVLDQFKQYP--SYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEecccchHHHHHHHHHH
Confidence 345555666666666666654 6689999999999999987754
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=96.78 E-value=0.0026 Score=44.65 Aligned_cols=65 Identities=18% Similarity=0.122 Sum_probs=45.5
Q ss_pred CcEEEEecCCCCcCCC--CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 83 GYAVFAADLLGHGRSD--GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 83 g~~v~~~d~~G~G~s~--~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
|-.+..+++|..-... +...+..+..+=+.++...|+....+.+ ..+++|+|+|.|+.++-.++.
T Consensus 35 ~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP--~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCP--DTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCT--TSEEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEeeccchHHHHHHHh
Confidence 5678888988653221 1111212344556778888888888876 779999999999999987764
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=96.39 E-value=0.017 Score=40.35 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=45.1
Q ss_pred CcEEEEecCCCCcCCC--CCcccCCChHHHhhcHHHHHHHHHhcCCCCCCCeEEEEechhHHHHHHHhh
Q 020633 83 GYAVFAADLLGHGRSD--GIRCYLGDMEKVAASSLSFFKHVRDSEPYRDLPGFLFGESMGGAATMLMYF 149 (323)
Q Consensus 83 g~~v~~~d~~G~G~s~--~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 149 (323)
|-.+..++||...... ....+..+..+=+..+...|+....+.+ ..+++|+|+|.|+.++-.++.
T Consensus 35 ~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP--~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 35 GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCP--STKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHST--TCEEEEEEETHHHHHHHHHHH
T ss_pred CCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCC--CCcEEEEeeccccHHHHHHHh
Confidence 5678888998642221 1112222445556778888888888876 679999999999999987764
|