Citrus Sinensis ID: 020634

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
Protein Sequence
MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQMA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcEEEEcccccHHHHHHcHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEcccccccccccccccccEEEEEEEccccHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccEEEHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEcccccccccEEEEEcccEEEEEEEccccHHHHcc
Coil and Loop (DISEMBL)
MESLRRQASKLKEQVAKQQQAVIKQFSasgyersdvmviDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYgaennqninenILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQqrvreapnpenvAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEkqrkesappvipsenssqKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQMA
Flexible Loop (DISEMBL)
meslrrqaSKLKEQVAKQQQAVIKqfsasgyersDVMVIDEVEMQRHQQLEklyrstrgtkdfQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENnqnineniLPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAvevskrqqrvreapnpenvAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEKqrkesappvipsensSQKAVYFLAEAIHPFTAASEKelslgvgdyvVVRKVCYISFLRQMA
Low Complexity Region (SEG)
MESLRRQASKLKEqvakqqqavikqFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMailgkeaaaalaaieaQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQMA
Disordered region (IsUnstruct)
**********************************DVMVIDEV*******LEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDAR************LL***VLDPLRAMI***********************************************************ANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE*************************AVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL****
Disordered Region (DISOPRED)
***************A****AVIKQFSA*GYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSR***********************************A*MQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE*****************************LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQ**
Disordered Region (DISEMBL)
********************AVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRY*************************NPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEA********************SSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQMA
Disordered Region (DISPRO)
*ES*RRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSE*****************QKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQ**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
xxxxxxxxxxxxxxxxxxxxxVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPxxxxxxxxxxxxxxxxxxxxxxxxxxxxQQRVREAPNPENVAKxxxxxxxxxxxxxxxxxxxxxxxxxxxxIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQMA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
186511991	351	SH3 domain-containing protein [Arabidops	0.984	0.905	0.798	1e-149
297800258	351	AT4g18060/F15J5_30 [Arabidopsis lyrata s	0.984	0.905	0.798	1e-148
16974680	351	SH3 domain-containing protein 3 [Arabido	0.984	0.905	0.786	1e-145
255557451	347	vav3, putative [Ricinus communis] gi|223	0.956	0.890	0.830	1e-140
224116716	349	predicted protein [Populus trichocarpa]	0.975	0.902	0.811	1e-139
224114387	352	predicted protein [Populus trichocarpa]	0.959	0.880	0.801	1e-139
449500573	348	PREDICTED: uncharacterized LOC101214418	0.959	0.890	0.798	1e-139
225463364	348	PREDICTED: uncharacterized protein LOC10	0.975	0.905	0.776	1e-138
148270940	348	Src homology-3 domain protein 3 [Cucumis	0.975	0.905	0.776	1e-136
356525323	348	PREDICTED: uncharacterized protein LOC10	0.959	0.890	0.782	1e-134

>gi|186511991|ref|NP_193540.3| SH3 domain-containing protein [Arabidopsis thaliana] gi|21928139|gb|AAM78097.1| AT4g18060/F15J5_30 [Arabidopsis thaliana] gi|25090269|gb|AAN72266.1| At4g18060/F15J5_30 [Arabidopsis thaliana] gi|332658589|gb|AEE83989.1| SH3 domain-containing protein [Arabidopsis thaliana]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/318 (79%), Positives = 283/318 (88%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++ RRQASKL++QVAKQQ AVIKQFS +GYE SDVMVIDE+EMQRH QL+KLYRSTR  
Sbjct: 1   MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           K+FQRD+VK AE FT IG +HIEAGTKLSEDCCRYG EN+QNI+ENIL KAAAIYGDARK
Sbjct: 61  KEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARK 120

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HV+KEQEDFN+LL+SQVLDPLRAM+ G+PLEDARHLAQRYSRMRQEAET A EVS+RQ R
Sbjct: 121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAETHATEVSRRQAR 180

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VREAP PENVAKL  AEA+MQELKANMA+LGKEA AALAA+E+QQHRLTFQRLVAMVEGE
Sbjct: 181 VREAPIPENVAKLQLAEAKMQELKANMAVLGKEATAALAAVESQQHRLTFQRLVAMVEGE 240

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           KNYHLRIAAIL D+EAEMV+EKQ KESAPP IP+EN S+K  YFLAE IHPF+AASEKEL
Sbjct: 241 KNYHLRIAAILSDIEAEMVTEKQHKESAPPAIPTENGSEKTSYFLAEVIHPFSAASEKEL 300

Query: 301 SLGVGDYVVVRKVCYISF 318
            L  GDY+VVRKV    +
Sbjct: 301 DLDKGDYIVVRKVSQTGW 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800258|ref|XP_002868013.1| AT4g18060/F15J5_30 [Arabidopsis lyrata subsp. lyrata] gi|297313849|gb|EFH44272.1| AT4g18060/F15J5_30 [Arabidopsis lyrata subsp. lyrata]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/318 (79%), Positives = 283/318 (88%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++ RRQASKL++QVAKQQ AVIKQFS +GYE SDVMVIDE+EMQRH QL+KLYRSTR  
Sbjct: 1   MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           K+FQRD+VK AE FT+IG +HIEAGTKLSEDCCRYG EN+QNI+ENIL KAAAIYGDARK
Sbjct: 61  KEFQRDIVKAAEAFTSIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARK 120

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HV+KEQEDFN+LL+SQVLDPLRAM+ G+PLEDARHLAQRYSRMRQEAET A EVS+RQ R
Sbjct: 121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAETHATEVSRRQAR 180

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VREAP PENVAKL  AEA+MQELKANMA+LGKEA AALAA+E+QQHRLTFQRLVAMVEGE
Sbjct: 181 VREAPIPENVAKLQLAEAKMQELKANMAVLGKEATAALAAVESQQHRLTFQRLVAMVEGE 240

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           KNYHLRIAAIL D+EAEMV+EKQ KESAPP IP+EN S+K  YFLAE IH F+AASEKEL
Sbjct: 241 KNYHLRIAAILSDIEAEMVTEKQHKESAPPAIPTENGSEKTSYFLAEVIHAFSAASEKEL 300

Query: 301 SLGVGDYVVVRKVCYISF 318
            L  GDYVVVRKV    +
Sbjct: 301 ELEKGDYVVVRKVSQTGW 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16974680|gb|AAL32440.1|AF367775_1 SH3 domain-containing protein 3 [Arabidopsis thaliana]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 250/318 (78%), Positives = 279/318 (87%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++ RRQASKL++QVAKQQ AVIKQFS +GYE SDVMVIDE+EMQRH QL+KLYRSTR  
Sbjct: 1   MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           K+FQRD+VK AE FT IG +HIEAGTKLSEDCCRYG E  +NI+ENIL KAAAIYGDARK
Sbjct: 61  KEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNEIVRNIDENILAKAAAIYGDARK 120

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HV+KEQEDFN+LL+SQVLDPLRAM+ G+PLEDARHLAQRYSRMRQEAET A EVS+RQ R
Sbjct: 121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAETHATEVSRRQAR 180

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VREAP PENVAKL  AEA+MQELKANMA+LGKEA AALAA+E+QQHRLTFQRLVAMVEGE
Sbjct: 181 VREAPIPENVAKLQLAEAKMQELKANMAVLGKEATAALAAVESQQHRLTFQRLVAMVEGE 240

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           KNYHLRIAAIL D+EAEMV+EKQ KESA P IP+EN S+K  YFLAE IHPF+A SEKEL
Sbjct: 241 KNYHLRIAAILSDIEAEMVTEKQHKESALPAIPTENGSEKTSYFLAEVIHPFSAVSEKEL 300

Query: 301 SLGVGDYVVVRKVCYISF 318
            L  GDY+VVRKV    +
Sbjct: 301 DLDKGDYIVVRKVSQTGW 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557451|ref|XP_002519756.1| vav3, putative [Ricinus communis] gi|223541173|gb|EEF42729.1| vav3, putative [Ricinus communis]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/313 (83%), Positives = 279/313 (89%), Gaps = 4/313 (1%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QA KL+EQVAKQQQAVIKQFS +GYE SDVMVIDEVEMQRHQQLEKLYRSTR  
Sbjct: 1   MDALRKQAFKLREQVAKQQQAVIKQFSGTGYESSDVMVIDEVEMQRHQQLEKLYRSTRAG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           KDFQ+D+VK AE FTAIGYKHIEAGTKLSEDCCRYG EN    N+NIL K A IYG+ARK
Sbjct: 61  KDFQKDIVKAAETFTAIGYKHIEAGTKLSEDCCRYGTEN---ANDNILSKGAGIYGEARK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HVEKEQED  RLLSSQVLDPLR MI GAPLEDARHLAQRYSRMRQEAETQA EVS+RQ R
Sbjct: 118 HVEKEQEDLIRLLSSQVLDPLRTMINGAPLEDARHLAQRYSRMRQEAETQAAEVSRRQVR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           V+E P PENVAKLHAAEA+MQELKANMA+LGKEAAAALAA+EAQQ RL+FQRLVAMVE E
Sbjct: 178 VKETPIPENVAKLHAAEAKMQELKANMAVLGKEAAAALAAVEAQQQRLSFQRLVAMVEAE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           KNYHLRIAAI  +VEAEMVSEKQRKESAPPVIPSEN S+K +YFLAE  HPF A +EKEL
Sbjct: 238 KNYHLRIAAIFSEVEAEMVSEKQRKESAPPVIPSENGSEK-MYFLAEVTHPFIAETEKEL 296

Query: 301 SLGVGDYVVVRKV 313
           SL VGDYVVVRKV
Sbjct: 297 SLAVGDYVVVRKV 309

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116716|ref|XP_002331860.1| predicted protein [Populus trichocarpa] gi|222875378|gb|EEF12509.1| predicted protein [Populus trichocarpa]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/323 (81%), Positives = 288/323 (89%), Gaps = 8/323 (2%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QASKL+EQVAKQQQAVIKQFS +GYE SDVMVIDEVEM RHQQLEKLYRSTR  
Sbjct: 1   MDALRKQASKLREQVAKQQQAVIKQFSGTGYESSDVMVIDEVEMHRHQQLEKLYRSTRSG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           KDFQ+D+VK AE FT IGY+HIEAGTKLSEDCCRYG EN   INEN+L KAAAIYGDARK
Sbjct: 61  KDFQKDVVKAAEAFTTIGYRHIEAGTKLSEDCCRYGTEN---INENMLAKAAAIYGDARK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HVE+EQ+D NRLLSSQVL+PLRAMI G PLEDARHLAQRYSRMRQEAETQAVEVS+RQ R
Sbjct: 118 HVEQEQDDLNRLLSSQVLEPLRAMINGGPLEDARHLAQRYSRMRQEAETQAVEVSRRQAR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VRE+P PENV+KLHAAEA+MQE+KANMA+LGKEAAAALAA+EAQQHRLTFQRLVAMVEGE
Sbjct: 178 VRESPIPENVSKLHAAEAKMQEIKANMAVLGKEAAAALAAVEAQQHRLTFQRLVAMVEGE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESA-----PPVIPSENSSQKAVYFLAEAIHPFTAA 295
           KNYHLRIAAIL +VEAEMVSEKQ+KESA     PPVIPSEN  +K+ YFLAEA HPF A 
Sbjct: 238 KNYHLRIAAILSEVEAEMVSEKQQKESAPPVILPPVIPSENGMEKSTYFLAEATHPFFAE 297

Query: 296 SEKELSLGVGDYVVVRKVCYISF 318
           +EKELSL VGDY+VVRKV    +
Sbjct: 298 TEKELSLAVGDYIVVRKVSPTGW 320

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114387|ref|XP_002316744.1| predicted protein [Populus trichocarpa] gi|222859809|gb|EEE97356.1| predicted protein [Populus trichocarpa]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/318 (80%), Positives = 283/318 (88%), Gaps = 8/318 (2%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QASKL+EQVAKQQQAVIKQFS++GYE SDVMVIDEVEM RHQQLEK+Y  TR  
Sbjct: 1   MDALRKQASKLREQVAKQQQAVIKQFSSTGYESSDVMVIDEVEMHRHQQLEKMYSLTRAG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           KDFQ+D++K AE FTAIGYKH+EAGTKLSEDCCRYG EN   INENIL KAAAIYGDA K
Sbjct: 61  KDFQKDILKAAESFTAIGYKHVEAGTKLSEDCCRYGTEN---INENILAKAAAIYGDAHK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HVE+EQED NRLL SQ+LDPLRAMIT +PLEDARHLAQRYSRMRQEAETQA E+S+RQ R
Sbjct: 118 HVEQEQEDLNRLLFSQILDPLRAMITDSPLEDARHLAQRYSRMRQEAETQAAELSRRQAR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VRE+P PEN+A+LHAAEA+MQE+KANMA+LGKEAAAALAA+EAQQHRLTFQRLVAMVEGE
Sbjct: 178 VRESPIPENIARLHAAEAKMQEIKANMAVLGKEAAAALAAVEAQQHRLTFQRLVAMVEGE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAP-----PVIPSENSSQKAVYFLAEAIHPFTAA 295
           KNYHLRIAAIL +VEAEMVSEKQ+KESAP     PVIPSEN S+K  YFLAEA H F A 
Sbjct: 238 KNYHLRIAAILSEVEAEMVSEKQQKESAPPVILLPVIPSENGSEKTTYFLAEATHLFIAE 297

Query: 296 SEKELSLGVGDYVVVRKV 313
           +EKELSL VGD +VVRKV
Sbjct: 298 TEKELSLAVGDCIVVRKV 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449500573|ref|XP_004161135.1| PREDICTED: uncharacterized LOC101214418 [Cucumis sativus]

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 250/313 (79%), Positives = 276/313 (88%), Gaps = 3/313 (0%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QASKLK QVAKQQQAVIKQF  SGYE SDVMVIDEVEMQRHQQLEK YRSTR  
Sbjct: 1   MDALRKQASKLKVQVAKQQQAVIKQFGGSGYESSDVMVIDEVEMQRHQQLEKFYRSTRAG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           +DFQ+D+VK  E F AIGY+HIE G KLSEDCC YGA    NINENIL KA++IYGDARK
Sbjct: 61  RDFQKDIVKAGEAFIAIGYRHIETGNKLSEDCCNYGA---NNINENILAKASSIYGDARK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HVEKEQED  +L SSQ+LDPLRAMITG PLEDARHLAQRYSRMRQEAET A E+S+R+ R
Sbjct: 118 HVEKEQEDLIKLFSSQILDPLRAMITGPPLEDARHLAQRYSRMRQEAETLAGEISRRRAR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VRE  NPENVAKLHA+EA+MQELKANMA+LGKEA+AALAA++AQQ RLT QRLVAMVEGE
Sbjct: 178 VREFSNPENVAKLHASEAKMQELKANMAVLGKEASAALAAVDAQQQRLTLQRLVAMVEGE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           K YHLR+AAILG+VEAEMV+EKQRKESAPPVI SEN S K+ +FLAEA+HPF AASEKEL
Sbjct: 238 KTYHLRVAAILGEVEAEMVTEKQRKESAPPVISSENHSGKSSFFLAEAVHPFNAASEKEL 297

Query: 301 SLGVGDYVVVRKV 313
           SL VGDYVVVRKV
Sbjct: 298 SLSVGDYVVVRKV 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463364|ref|XP_002272365.1| PREDICTED: uncharacterized protein LOC100258967 [Vitis vinifera] gi|297740624|emb|CBI30806.3| unnamed protein product [Vitis vinifera]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/318 (77%), Positives = 281/318 (88%), Gaps = 3/318 (0%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QASK +EQVAKQQQAVIKQF  +GYE SDVMVIDEVEMQRHQQLEKLYRSTR  
Sbjct: 1   MDALRKQASKFREQVAKQQQAVIKQFGGTGYESSDVMVIDEVEMQRHQQLEKLYRSTRAG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           KDFQ+D+V+  E FTAIGYK IE GTKLSEDCCRYGAEN   IN+NIL +AA+IYGD  K
Sbjct: 61  KDFQKDIVRAGEAFTAIGYKQIETGTKLSEDCCRYGAEN---INDNILARAASIYGDGLK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           H+ KEQED N+LLSSQ+LDPLRAM+TGAPLEDARHLAQRYSRMR EAETQA EVS+RQ R
Sbjct: 118 HIAKEQEDLNKLLSSQILDPLRAMVTGAPLEDARHLAQRYSRMRHEAETQAAEVSRRQAR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           +REAPNPEN A+L+ AEA+M+ELKANMA+LGKEAAAALAA+EAQQ RL+FQRLVAMVEGE
Sbjct: 178 LREAPNPENAARLNIAEAKMKELKANMAVLGKEAAAALAAVEAQQQRLSFQRLVAMVEGE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           + YH RIA I G+VE+EMVSEKQRKESAPP IPSE+ S+K +YFLAEA+H F+AASEKEL
Sbjct: 238 RTYHQRIATIFGEVESEMVSEKQRKESAPPAIPSESHSEKTMYFLAEAMHAFSAASEKEL 297

Query: 301 SLGVGDYVVVRKVCYISF 318
           SL VGDYVVVRKV +  +
Sbjct: 298 SLNVGDYVVVRKVSHTGW 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148270940|gb|ABQ53638.1| Src homology-3 domain protein 3 [Cucumis melo]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/318 (77%), Positives = 276/318 (86%), Gaps = 3/318 (0%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QASKLK QVAKQQQAVIKQF  SGYE SDVMVIDEVEMQRHQQLEK Y+STR  
Sbjct: 1   MDALRKQASKLKVQVAKQQQAVIKQFGGSGYESSDVMVIDEVEMQRHQQLEKFYKSTRAG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           +DFQ+D+VK  E F AIGY+HIE G KLSEDCC YGA    NINENIL KA++IYGDA K
Sbjct: 61  RDFQKDIVKAGEAFIAIGYRHIETGNKLSEDCCNYGA---NNINENILAKASSIYGDACK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HVEKEQED  +LLSSQ+LDPLRAMITG PLEDARHLAQRYSRMRQEAE+ A E+S+R+ R
Sbjct: 118 HVEKEQEDLIKLLSSQILDPLRAMITGPPLEDARHLAQRYSRMRQEAESLAAEISRRRAR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VRE  NPENVAKLHA+EA+MQELKANMA+LGKEA+AALAA++AQQ RLT QRLVAMVEGE
Sbjct: 178 VREFSNPENVAKLHASEAKMQELKANMAVLGKEASAALAAVDAQQQRLTLQRLVAMVEGE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           K YHLR+AAILG+VEAEMV+EKQRKESAPPVI SEN   K+ +FLAEA+HPF AASEKEL
Sbjct: 238 KTYHLRVAAILGEVEAEMVTEKQRKESAPPVISSENHPGKSSFFLAEAVHPFNAASEKEL 297

Query: 301 SLGVGDYVVVRKVCYISF 318
           SL VGDYVVVRKV    +
Sbjct: 298 SLSVGDYVVVRKVSPTGW 315

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525323|ref|XP_003531274.1| PREDICTED: uncharacterized protein LOC100820088 [Glycine max]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/313 (78%), Positives = 278/313 (88%), Gaps = 3/313 (0%)

Query: 1   MESLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
           M++LR+QASKL+EQVAKQQQAVIKQFS+SGYE SDV+VIDEVEMQRH QLEKLYR+TR  
Sbjct: 1   MDALRKQASKLREQVAKQQQAVIKQFSSSGYESSDVVVIDEVEMQRHHQLEKLYRATRSG 60

Query: 61  KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
           KDFQ+++VK AE FTAIGYKHIE GTKLSEDCC+YGAENN   ++NIL KAA++YGDARK
Sbjct: 61  KDFQKEIVKAAETFTAIGYKHIETGTKLSEDCCKYGAENN---SDNILAKAASVYGDARK 117

Query: 121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
           HVEKE E+ NRLLS+QVLDPLR MI G PLEDARHLAQRYSRMRQEAE Q  E+ +RQ R
Sbjct: 118 HVEKEHEELNRLLSTQVLDPLRQMINGVPLEDARHLAQRYSRMRQEAEAQREEIVRRQAR 177

Query: 181 VREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE 240
           VREAP  E VAKLHAAEA+MQELKANMA+LGKEAAAALAA+EAQQ RLTFQRLVAMVEGE
Sbjct: 178 VREAPTAEQVAKLHAAEAKMQELKANMAVLGKEAAAALAAVEAQQQRLTFQRLVAMVEGE 237

Query: 241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
           K +HLR+AAILG++EAEMVS++Q+KESAPPV  SEN S+K +YFLAEA HPF+A SEKEL
Sbjct: 238 KTFHLRVAAILGEIEAEMVSDRQKKESAPPVGISENGSEKTMYFLAEATHPFSAESEKEL 297

Query: 301 SLGVGDYVVVRKV 313
           S   GD+VVVRKV
Sbjct: 298 SFSKGDFVVVRKV 310

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
TAIR|locus:2117666	351	AT4G18060 "AT4G18060" [Arabido	0.969	0.891	0.738	8.5e-120
TAIR|locus:2139554	368	AT4G34660 "AT4G34660" [Arabido	0.842	0.739	0.469	2.4e-60
TAIR|locus:2206174	439	AT1G31440 [Arabidopsis thalian	0.829	0.610	0.383	5.4e-53
DICTYBASE|DDB_G0279009	576	gacP "RhoGAP domain-containing	0.470	0.263	0.251	0.00023

TAIR|locus:2117666 AT4G18060 "AT4G18060" [Arabidopsis thaliana (taxid:3702)]

 Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
 Identities = 231/313 (73%), Positives = 256/313 (81%)

Query:     1 MESLRRQASKLKEXXXXXXXXXXXXFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
             M++ RRQASKL++            FS +GYE SDVMVIDE+EMQRH QL+KLYRSTR  
Sbjct:     1 MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query:    61 KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
             K+FQRD+VK AE FT IG +HIEAGTKLSEDCCRYG EN+QNI+ENIL KAAAIYGDARK
Sbjct:    61 KEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARK 120

Query:   121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
             HV+KEQEDFN+LL+SQVLDPLRAM+ G+PLEDARHLAQRYSRMRQEAET A EVS+RQ R
Sbjct:   121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAETHATEVSRRQAR 180

Query:   181 VREAPNPENVAKLHAAEARMQELKANMXXXXXXXXXXXXXXXXQQHRLTFQRLVAMVEGE 240
             VREAP PENVAKL  AEA+MQELKANM                QQHRLTFQRLVAMVEGE
Sbjct:   181 VREAPIPENVAKLQLAEAKMQELKANMAVLGKEATAALAAVESQQHRLTFQRLVAMVEGE 240

Query:   241 KNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKEL 300
             KNYHLRIAAIL D+EAEMV+EKQ KESAPP IP+EN S+K  YFLAE IHPF+AASEKEL
Sbjct:   241 KNYHLRIAAILSDIEAEMVTEKQHKESAPPAIPTENGSEKTSYFLAEVIHPFSAASEKEL 300

Query:   301 SLGVGDYVVVRKV 313
              L  GDY+VVRKV
Sbjct:   301 DLDKGDYIVVRKV 313

GO:0030276 "clathrin binding" evidence=ISS

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2139554 AT4G34660 "AT4G34660" [Arabidopsis thaliana (taxid:3702)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 131/279 (46%), Positives = 177/279 (63%)

Query:     1 MESLRRQASKLKEXXXXXXXXXXXXFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
             M+++R+QAS+L+E            F   GY      + DE E+ +HQ+LEKLY STR  
Sbjct:     1 MDAIRKQASRLREQVARQQQAVFKQFGGGGYGSG---LADEAELNQHQKLEKLYISTRAA 57

Query:    61 KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
             K +QRD+V+  E +   G K +E GTKLSED  +YG+EN    N N+L +AA  YG AR 
Sbjct:    58 KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGSENTCT-NGNVLTRAALNYGRARA 116

Query:   121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
              +EKE+ +  + L +QV +PLRAM+ GAPLEDARHLAQRY RMRQEAE QA EV++RQ +
Sbjct:   117 QMEKERGNMLKALGTQVAEPLRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQAK 176

Query:   181 VREAP-NPENVAKLHAAEARMQELKANMXXXXXXXXXXXXXXXXQQHRLTFQRLVAMVEG 239
              RE+  NP+ + KL +AEA++ +LK+NM                QQ +LT +RL++MVE 
Sbjct:   177 ARESQGNPDILMKLESAEAKLHDLKSNMTILGKEAASALASVEDQQQKLTLERLLSMVES 236

Query:   240 EKNYHLRIAAILGDVEAEMVSEKQRKESAPPVIPSENSS 278
             E+ YH R+  IL  +E EMVSE+QR E+  P  PS   S
Sbjct:   237 ERAYHQRVLQILDQLEGEMVSERQRIEA--PSTPSSADS 273

GO:0008150 "biological_process" evidence=ND

GO:0030276 "clathrin binding" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2206174 AT1G31440 [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
 Identities = 105/274 (38%), Positives = 158/274 (57%)

Query:     1 MESLRRQASKLKEXXXXXXXXXXXXFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT 60
             ME++R+QA+KL+E                G+  +D +V+DE E+  HQ+L+ LY ST+  
Sbjct:     1 MEAIRKQAAKLREQVARQQQAVLKHL---GHVNADAVVVDEEELHCHQKLQDLYSSTKAA 57

Query:    61 KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARK 120
             K  QR++V+  E F A G K +E G K +ED  +YG EN  + N   L + A  +G + K
Sbjct:    58 KRLQRNIVRGLEGFIATGTKVVEIGLKFAEDFKKYGDEN-PDANTP-LSRVAHHFGTSYK 115

Query:   121 HVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQR 180
              VE E+E    +LS QV +P+R MI  APLEDARHL   Y R+RQE E QA +V +R+ +
Sbjct:   116 SVEGERETLLGVLSEQVCEPIRTMIYSAPLEDARHLVNHYDRLRQEVEAQATDVLRRRSK 175

Query:   181 VREAP-NPENVAKLHAAEARMQELKANMXXXXXXXXXXXXXXXXQQHRLTFQRLVAMVEG 239
             ++E+  + E   KL  +E+R+ ELK++M                QQ  +T QRL A+VE 
Sbjct:   176 LKESDISEEAYIKLKNSESRLAELKSSMKTLGKEATKAMLEVDDQQQNVTSQRLRALVEA 235

Query:   240 EKNYHLRIAAILGDVEAEMVSEKQRKESAPPVIP 273
             E++YH     IL  + +EM++E++   S+P  +P
Sbjct:   236 ERSYHRNALDILDKLHSEMIAEEEAIGSSPKSLP 269

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0012505 "endomembrane system" evidence=IDA

GO:0030276 "clathrin binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

DICTYBASE|DDB_G0279009 gacP "RhoGAP domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
 Identities = 40/159 (25%), Positives = 74/159 (46%)

Query:    49 QLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINEN-I 107
             ++++L + T  TKDF R L K  E  T      I+ GT+L+++   Y      N ++  I
Sbjct:    30 EMKELEKKTTETKDFLRKLTKSVEKETLSSGVSIQDGTELADNFLDYSVHVRDNQSDLVI 89

Query:   108 LPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA 167
             L    +  G+ +   E  +   N  L + V DPL+++I    L+ A+   + Y R+R   
Sbjct:    90 LSGILSKIGEFQAGFEDLKSKLNSSLINDVSDPLKSIIK-TELKQAKESKREYDRVRVAF 148

Query:   168 ETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKAN 206
             +    E++  +++    P P    K+  +E   + L+ N
Sbjct:   149 DAHLSELANLRKQKNVKP-P----KIQESEEECERLRTN 182


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.129   0.348    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      323       295   0.00092  115 3  10 22  0.40    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  250 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.44u 0.10s 37.54t   Elapsed:  00:00:02
  Total cpu time:  37.44u 0.10s 37.54t   Elapsed:  00:00:02
  Start:  Fri May 10 01:23:12 2013   End:  Fri May 10 01:23:14 2013

GO:0007165 "signal transduction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	323
cd07607	209	cd07607, BAR_SH3P_plant, The Bin/Amphiphysin/Rvs (	2e-76
cd11839	58	cd11839, SH3_Intersectin_4, Fourth Src homology 3	8e-06

>gnl|CDD|153291 cd07607, BAR_SH3P_plant, The Bin/Amphiphysin/Rvs (BAR) domain of the plant SH3 domain-containing proteins

 Score =  232 bits (594), Expect = 2e-76
 Identities = 113/211 (53%), Positives = 155/211 (73%), Gaps = 3/211 (1%)

Query: 48  QQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENI 107
           Q+LE+LY STR  K FQRD+V+  E F + G K +E GTKL+EDC +YG+EN  ++N   
Sbjct: 1   QKLERLYASTRAAKHFQRDIVRGVEGFISTGSKQLEIGTKLAEDCKKYGSEN-PSVNTA- 58

Query: 108 LPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA 167
           L +A+  YG AR  +EKE+E+ +R+LS QV +PLRAM+ GAPLEDARHL QRY R+RQE 
Sbjct: 59  LSRASLHYGSARNQMEKERENLHRVLSEQVAEPLRAMVYGAPLEDARHLKQRYDRLRQEV 118

Query: 168 ETQAVEVSKRQQRVREAP-NPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQH 226
           E QA EV++R+ + +E+  NP+N AKL +AE+++ ELK++M  LGKEA +A+ A+E QQ 
Sbjct: 119 EAQAAEVARRRSKDKESGGNPDNAAKLQSAESKLDELKSSMNTLGKEATSAMLAVEDQQQ 178

Query: 227 RLTFQRLVAMVEGEKNYHLRIAAILGDVEAE 257
           ++T QRL+AMVE E+ YH R A IL  +  E
Sbjct: 179 QVTLQRLLAMVEAERAYHQRAADILDKLHDE 209

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. This group is composed of proteins with similarity to Arabidopsis thaliana SH3 domain-containing proteins 1 (SH3P1) and 2 (SH3P2). SH3P1 is involved in the trafficking of clathrin-coated vesicles. It is localized at the plasma membrane and is associated with vesicles of the trans-Golgi network. Yeast complementation studies reveal that SH3P1 has similar functions to the Saccharomyces cerevisiae Rvs167p, which is involved in endocytosis and actin cytoskeletal arrangement. Members of this group contain an N-terminal BAR domain and a C-terminal SH3 domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions. Length = 209

>gnl|CDD|212773 cd11839, SH3_Intersectin_4, Fourth Src homology 3 domain (or SH3D) of Intersectin

 Score = 42.3 bits (100), Expect = 8e-06
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 285 LAEAIHPFTAASEKELSLGVGDYVVVRKV 313
           +A+ I PFTA +E +LSL VG  V+VRK 
Sbjct: 1   IAQVIAPFTATAENQLSLAVGQLVLVRKK 29

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fourth SH3 domain (or SH3D) of ITSN1 has been shown to bind SHIP2, Numb, CdGAP, and N-WASP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	323
cd07607	209	BAR_SH3P_plant The Bin/Amphiphysin/Rvs (BAR) domai	100.0
cd07307	194	BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimeri	99.45
PF03114	229	BAR: BAR domain; InterPro: IPR004148 Endocytosis a	99.16
smart00721	239	BAR BAR domain.	98.67
cd07604	215	BAR_ASAPs The Bin/Amphiphysin/Rvs (BAR) domain of	97.67
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	97.55
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	97.54
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	97.53
KOG1118	366	consensus Lysophosphatidic acid acyltransferase en	97.47
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	97.45
cd07595	244	BAR_RhoGAP_Rich-like The Bin/Amphiphysin/Rvs (BAR)	97.44
cd07639	200	BAR_ACAP1 The Bin/Amphiphysin/Rvs (BAR) domain of	97.42
cd07594	229	BAR_Endophilin_B The Bin/Amphiphysin/Rvs (BAR) dom	97.25
cd07616	229	BAR_Endophilin_B1 The Bin/Amphiphysin/Rvs (BAR) do	97.17
cd07603	200	BAR_ACAPs The Bin/Amphiphysin/Rvs (BAR) domain of	97.13
cd07619	248	BAR_Rich2 The Bin/Amphiphysin/Rvs (BAR) domain of	97.11
cd07606	202	BAR_SFC_plant The Bin/Amphiphysin/Rvs (BAR) domain	97.09
cd07592	223	BAR_Endophilin_A The Bin/Amphiphysin/Rvs (BAR) dom	97.06
cd07634	207	BAR_GAP10-like The Bin/Amphiphysin/Rvs (BAR) domai	97.01
cd07637	200	BAR_ACAP3 The Bin/Amphiphysin/Rvs (BAR) domain of	96.97
cd07602	207	BAR_RhoGAP_OPHN1-like The Bin/Amphiphysin/Rvs (BAR	96.94
cd07600	242	BAR_Gvp36 The Bin/Amphiphysin/Rvs (BAR) domain of	96.91
cd07593	215	BAR_MUG137_fungi The Bin/Amphiphysin/Rvs (BAR) dom	96.88
cd07613	223	BAR_Endophilin_A1 The Bin/Amphiphysin/Rvs (BAR) do	96.84
cd07617	220	BAR_Endophilin_B2 The Bin/Amphiphysin/Rvs (BAR) do	96.52
cd07638	200	BAR_ACAP2 The Bin/Amphiphysin/Rvs (BAR) domain of	96.46
cd07618	246	BAR_Rich1 The Bin/Amphiphysin/Rvs (BAR) domain of	96.37
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	96.31
cd07615	223	BAR_Endophilin_A3 The Bin/Amphiphysin/Rvs (BAR) do	96.27
cd07636	207	BAR_GRAF The Bin/Amphiphysin/Rvs (BAR) domain of G	96.18
cd07590	225	BAR_Bin3 The Bin/Amphiphysin/Rvs (BAR) domain of B	95.63
cd07635	207	BAR_GRAF2 The Bin/Amphiphysin/Rvs (BAR) domain of	95.61
cd07614	223	BAR_Endophilin_A2 The Bin/Amphiphysin/Rvs (BAR) do	95.44
cd07588	211	BAR_Amphiphysin The Bin/Amphiphysin/Rvs (BAR) doma	94.55
cd07598	211	BAR_FAM92 The Bin/Amphiphysin/Rvs (BAR) domain of	94.42
cd07596	218	BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of So	94.15
cd07601	215	BAR_APPL The Bin/Amphiphysin/Rvs (BAR) domain of A	93.61
KOG0162	1106	consensus Myosin class I heavy chain [Cytoskeleton	92.05
cd07620	257	BAR_SH3BP1 The Bin/Amphiphysin/Rvs (BAR) domain of	91.76
cd07676	253	F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/A	90.65
KOG4225	489	consensus Sorbin and SH3 domain-containing protein	90.23
PF09325	236	Vps5: Vps5 C terminal like; InterPro: IPR015404 Vp	89.12
KOG1029	1118	consensus Endocytic adaptor protein intersectin [S	86.49
PF10455	289	BAR_2: Bin/amphiphysin/Rvs domain for vesicular tr	84.35
cd07631	215	BAR_APPL1 The Bin/Amphiphysin/Rvs (BAR) domain of	82.44
KOG4226	379	consensus Adaptor protein NCK/Dock, contains SH2 a	80.37

>cd07607 BAR_SH3P_plant The Bin/Amphiphysin/Rvs (BAR) domain of the plant SH3 domain-containing proteins

Probab=100.00  E-value=1.7e-119  Score=805.34  Aligned_cols=208  Identities=54%  Similarity=0.844  Sum_probs=205.1

Q ss_pred             HHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHH
Q 020634           48 QQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQE  127 (323)
Q Consensus        48 q~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre  127 (323)
                      |+|||||+|||||||||||||||||||||||+||||||+||||||||||+|||  +++++||||+++||+||++||||||
T Consensus         1 q~LekLY~STRaaKhFQrdIVrgvEg~is~g~Kq~Ei~~KlaeDc~KYG~en~--~~~~~LsrAa~~yG~a~~~mEkEre   78 (209)
T cd07607           1 QKLERLYASTRAAKHFQRDIVRGVEGFISTGSKQLEIGTKLAEDCKKYGSENP--SVNTALSRASLHYGSARNQMEKERE   78 (209)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhhhheechhHHHHHHHHHHHHHHhccCCC--CcccHHHHHHHHHhHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999  5788999999999999999999999


Q ss_pred             HHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCC-ChhhhhhhHHHHHHHHHHHHH
Q 020634          128 DFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAP-NPENVAKLHAAEARMQELKAN  206 (323)
Q Consensus       128 ~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~-n~e~~~KLq~AE~Kl~ELks~  206 (323)
                      ||||+||+||+||||||||||||||||||+|||||||||+|+||+||+|||+|+||++ ||||++||++||+||+|||||
T Consensus        79 ~l~r~l~~QV~ePLRaMv~GaPLEDARhL~qrYdRmRQeaE~qa~eV~RRq~k~res~~~~e~~~KL~~AE~Kl~elks~  158 (209)
T cd07607          79 NLHRVLSEQVAEPLRAMVYGAPLEDARHLKQRYDRLRQEVEAQAAEVARRRSKDKESGGNPDNAAKLQSAESKLDELKSS  158 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999986 999999999999999999999


Q ss_pred             HHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 020634          207 MAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAE  257 (323)
Q Consensus       207 Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~E  257 (323)
                      |++|||||||||++||+||||+||||||+||||||+|||||++|||+||+|
T Consensus       159 M~~LGKEA~aAm~aVEaQQQrlTlqRL~amVeaEr~Yhqrv~~ILd~l~~e  209 (209)
T cd07607         159 MNTLGKEATSAMLAVEDQQQQVTLQRLLAMVEAERAYHQRAADILDKLHDE  209 (209)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999999999999986

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. This group is composed of proteins with similarity to Arabidopsis thaliana SH3 domain-containing proteins 1 (SH3P1) and 2 (SH3P2). SH3P1 is involved in the trafficking of clathrin-coated vesicles. It is localized at the plasma membrane and is associated with vesicles of the trans-Golgi network. Yeast complementation studies reveal that SH3P1 has similar functions to the Saccharomyces cerevisiae Rvs167p, which is involved in endocytosis and actin cytoskeletal arrangement. Members of this group contain an N-terminal BAR domain and a C-terminal SH3 domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be i

>cd07307 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

Probab=99.45  E-value=1.5e-11  Score=97.88  Aligned_cols=189  Identities=20%  Similarity=0.330  Sum_probs=165.3

Q ss_pred             chhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhh
Q 020634           59 GTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVL  138 (323)
Q Consensus        59 aaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~  138 (323)
                      ..+++-+.|++.+..++..+.+.......|++-++++|...+ ..++..|+.+-..||.+...++..+.++..-+...|.
T Consensus         4 ~~~~~~~kl~k~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~l~~~l~~~~~~~~~l~~~~~~~~~~~~~~v~   82 (194)
T cd07307           4 ELEKLLKKLIKDTKKLLDSLKELPAAAEKLSEALQELGKELP-DLSNTDLGEALEKFGKIQKELEEFRDQLEQKLENKVI   82 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345556777777888888888888889999999999999987 3333359999999999999999999999999999999


Q ss_pred             hHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHH
Q 020634          139 DPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAAL  218 (323)
Q Consensus       139 ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM  218 (323)
                      +||+..+. ..+.+.+....+|++.|.+.++--..+.+-+.+..      +..||..++.++++.+.....+..+....|
T Consensus        83 ~pL~~~~~-~~~~~~~~~~k~~~~~~~~yd~~~~k~~~~~~~~~------~~~~l~~~~~~~~~ar~~y~~~~~~~~~~l  155 (194)
T cd07307          83 EPLKEYLK-KDLKEIKKRRKKLDKARLDYDAAREKLKKLRKKKK------DSSKLAEAEEELQEAKEKYEELREELIEDL  155 (194)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999997 45678899999999999999998877766554421      568999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          219 AAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       219 ~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      ..+..........-|.+++++...||..+..++++|.
T Consensus       156 ~~~~~~~~~~~~~~L~~~~~~q~~~~~~~~~~~~~l~  192 (194)
T cd07307         156 NKLEEKRKELFLSLLLSFIEAQSEFFKEVLKILEQLL  192 (194)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence            9999999999999999999999999999999988774

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. Mutations in BAR containing proteins have been linked to diseases and their inactivation in cells leads to altered membrane dynamics. A BAR domain with an additional N-terminal amphipathic helix (an N-BAR) can drive membrane curvature. These N-BAR domains are found in amphiphysins and endophilins, among others. BAR domains are also frequently found alongside domains that determine lipid specificity, such as the Pleckstrin Homology (PH) and Phox Homology (PX) domains which are present in beta centaurins (ACAPs and ASAPs) and sorting nexins, respectively. A FES-CIP4 Homology (FCH) domain together with a coiled coil region is called the F-

>PF03114 BAR: BAR domain; InterPro: IPR004148 Endocytosis and intracellular transport involve several mechanistic steps: (1) for the internalisation of cargo molecules, the membrane needs to bend to form a vesicular structure, which requires membrane curvature and a rearrangement of the cytoskeleton; (2) following its formation, the vesicle has to be pinched off the membrane; (3) the cargo has to be subsequently transported through the cell and the vesicle must fuse with the correct cellular compartment

Probab=99.16  E-value=1.6e-08  Score=83.77  Aligned_cols=219  Identities=18%  Similarity=0.352  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhh------
Q 020634           13 EQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGT------   86 (323)
Q Consensus        13 EqVAkQQQAV~Kqf~~~gy~~~d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~------   86 (323)
                      -.+.+-.|.|.-.+|.+     +...+|+.=-....++..+...+   ++++++    ++.|+....+-..-..      
T Consensus         3 K~~~R~~q~~~~k~g~~-----~~t~~D~~f~~~~~~~~~~~~~~---~~l~~~----~~~~~~~~~~~~~~~~~~~~~~   70 (229)
T PF03114_consen    3 KKINRAKQRVKQKLGKS-----EKTEIDEEFEELEEKFKQLEESI---KKLQKS----LKKYLDSIKKLSASQKNMKSPF   70 (229)
T ss_dssp             HHHHHHHHHHHHHHTSH-----HHHHHHHHHHHHHHHHHHHHHHH---HHHHHH----HHHHHHHHHHHHHHHHCHTHHH
T ss_pred             hHHHHHHHHHHHHcCCC-----CCCcCCHHHHHHHHHHHHHHHHH---HHHHHH----HHHHHHHhhhhhHHhhhhhHHH
Confidence            44667777888888833     23336774222334444444333   344444    4444444444444444      


Q ss_pred             -hchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHH
Q 020634           87 -KLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQ  165 (323)
Q Consensus        87 -KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQ  165 (323)
                       +|++.+..||.+..   .+..++.+...||.+...+...+.+++.-+.+.|.+||+..+  ..+.+...+...+++.|.
T Consensus        71 ~~l~~~l~~~~~~~~---~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~vi~pl~~~~--~~~~~i~~~~kkr~~~~l  145 (229)
T PF03114_consen   71 EELADALIELGSEFS---DDSSLGNALEKFGEAMQEIEEARKELESQIESTVIDPLKEFL--KEFKEIKKLIKKREKKRL  145 (229)
T ss_dssp             HHHHHHHHHHHHCTS---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccc---ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHH
Confidence             99999999998864   333489999999999999999999999999999999999988  899999999999999999


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHH
Q 020634          166 EAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHL  245 (323)
Q Consensus       166 EaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHq  245 (323)
                      +.+.....+.+-+.+  ++.++.        +.++++.+.....+..+-..-|-.+.+-...+-..-|..+|++...||+
T Consensus       146 dyd~~~~k~~k~~~~--~~~~~~--------~~~l~~a~~~f~~~~~~l~~~l~~l~~~~~~~l~~~l~~~i~~q~~~~~  215 (229)
T PF03114_consen  146 DYDSARSKLEKLRKK--KSKSSK--------EEKLEEAKEEFEALNEELKEELPKLFAKRQDILEPCLQSFIEAQLQYFQ  215 (229)
T ss_dssp             HHHHHHHHHHHCHTT--SSBTHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh--hccccc--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999987777765433  221222        6677777777777777777888888877777777899999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020634          246 RIAAILGDVEAEM  258 (323)
Q Consensus       246 rv~~ILd~l~~EM  258 (323)
                      .+..+|..|..++
T Consensus       216 ~~~~~l~~l~~~l  228 (229)
T PF03114_consen  216 QLYQILEELQPQL  228 (229)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998875

Members of the Amphiphysin protein family are key regulators in the early steps of endocytosis, involved in the formation of clathrin-coated vesicles by promoting the assembly of a protein complex at the plasma membrane and directly assist in the induction of the high curvature of the membrane at the neck of the vesicle. Amphiphysins contain a characteristic domain, known as the BAR (Bin-Amphiphysin-Rvs)-domain, which is required for their in vivo function and their ability to tubulate membranes []. The crystal structure of these proteins suggest the domain forms a crescent-shaped dimer of a three-helix coiled coil with a characteristic set of conserved hydrophobic, aromatic and hydrophilic amino acids. Proteins containing this domain have been shown to homodimerise, heterodimerise or, in a few cases, interact with small GTPases. ; GO: 0005515 protein binding, 0005737 cytoplasm; PDB: 4AVM_A 2D4C_C 1X03_A 1X04_A 2RND_A 2RMY_A 2FIC_A 2C08_A 2Z0V_A 3SOG_A ....

>smart00721 BAR BAR domain

Probab=98.67  E-value=2e-05  Score=67.58  Aligned_cols=227  Identities=16%  Similarity=0.235  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhhee---ecccchhhhhhhchh
Q 020634           14 QVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFT---AIGYKHIEAGTKLSE   90 (323)
Q Consensus        14 qVAkQQQAV~Kqf~~~gy~~~d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfi---s~gsKq~Ei~~KLae   90 (323)
                      ++.|--|.|.-.+|.+     +-..+||.=.    .||+-+..+..   .=..|++.+++|+   .....-..+...+++
T Consensus         5 ~~~R~~q~~~ek~G~~-----e~T~~D~~f~----~le~~~~~~~~---~~~kl~k~~~~y~q~~~~~~~~~~~~~~~~~   72 (239)
T smart00721        5 QFNRAKQKVGEKVGKA-----EKTKLDEDFE----ELERRFDTTEA---EIEKLQKDTKLYLQPNPAVRAKLASQKKLSK   72 (239)
T ss_pred             hhHHHHHHHHHHhCCC-----CcCcCCHHHH----HHHHHHHHHHH---HHHHHHHHHHHHcCCChhhHHHHHHHHHHHH
Confidence            3555566777788833     4444476532    33433333322   2246777778887   555555555566666


Q ss_pred             hhhh-hcc--CCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHH
Q 020634           91 DCCR-YGA--ENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA  167 (323)
Q Consensus        91 Dc~K-YG~--en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEa  167 (323)
                      .... |+.  ..++......+..+-..||.+...+-.-+..+ .-+..-+..|++.-+. .-+.+++....++++.|.+-
T Consensus        73 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~-~~~~~~~~~~kk~~~~~lDy  150 (239)
T smart00721       73 SLGEVYEGGDDGEGLGADSSYGKALDKLGEALKKLLQVEESL-SQVKRTFILPLLNFLL-GEFKEIKKARKKLERKLLDY  150 (239)
T ss_pred             HHHHHhcCCCCccccCchhHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHhhhhHHHHHH-HHhHHHHHHHHHHHhHHHHH
Confidence            5444 443  22223344457888889999999998888888 6666677777776653 34567888888888888888


Q ss_pred             HHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHH
Q 020634          168 ETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRI  247 (323)
Q Consensus       168 E~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv  247 (323)
                      ++.-..+.+=+.+.+  .++ +- ||..||.+|...+.....+.-+...-|..+.+=-.-.-..-|.+.+++..+||..+
T Consensus       151 D~~~~kl~~~~~~~~--~~~-~~-kl~~~e~el~~ak~~fe~~~~~l~~~l~~l~~~~~~~~~~~l~~~~~aq~~y~~~~  226 (239)
T smart00721      151 DSARHKLKKAKKSKE--KKK-DE-KLAKAEEELRKAKQEFEESNAQLVEELPQLVASRVDFFVNCLQALIEAQLNFHRES  226 (239)
T ss_pred             HHHHHHHHHHHHhcc--CCh-hh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence            877666654333311  122 23 99999999999999999999999999999987777777889999999999999999


Q ss_pred             HHHHHHHHHHH
Q 020634          248 AAILGDVEAEM  258 (323)
Q Consensus       248 ~~ILd~l~~EM  258 (323)
                      ..+|.+|...|
T Consensus       227 ~~~l~~l~~~l  237 (239)
T smart00721      227 YKLLQQLQQQL  237 (239)
T ss_pred             HHHHHHHHHHh
Confidence            99999998766

>cd07604 BAR_ASAPs The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing proteins

Probab=97.67  E-value=0.0053  Score=56.05  Aligned_cols=181  Identities=17%  Similarity=0.247  Sum_probs=129.0

Q ss_pred             hhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCC
Q 020634           69 KVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGA  148 (323)
Q Consensus        69 RgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~Ga  148 (323)
                      |++=+++..|.-.++--..+++.-++.|..-. ..++..++.+-..||.+-..|++.+++|..-+..-|..||-..+.+ 
T Consensus        23 K~~k~~~~~g~~~~~~~~~F~~aL~~~g~~~~-~~~~~~i~~~l~kF~~~l~El~~~~~~L~~~~~~~i~~pL~~f~k~-  100 (215)
T cd07604          23 KAVKAIHNSGLAHVENELQFAEALEKLGSKAL-SREEEDLGAAFLKFSVFTKELAALFKNLMQNLNNIIMFPLDSLLKG-  100 (215)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHhcccc-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            44445666777777777778888888886532 1122248888999999999999999999999999999999999998 


Q ss_pred             Cccchh-hHHHHHHHHHHHHHHhHHHHHHHHhh-hccCC-------ChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 020634          149 PLEDAR-HLAQRYSRMRQEAETQAVEVSKRQQR-VREAP-------NPENVAKLHAAEARMQELKANMAILGKEAAAALA  219 (323)
Q Consensus       149 PLEDAR-hLaqRYdRmRQEaE~qa~eV~rRq~k-~res~-------n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~  219 (323)
                      .|.+++ -+..+||+-+.+-|.-..-+.|.+.+ +++..       .+|...=|+.+....++..       -+=...+.
T Consensus       101 dL~~~k~e~KK~fdK~s~~ye~~~~k~~k~Kk~~~~~~~~~r~e~~~~e~~~~l~~~R~~F~~~~-------~~yv~~l~  173 (215)
T cd07604         101 DLKGSKGDLKKPFDKAWKDYETKASKIEKEKKQLAKEAGMIRTEITGAEIAEEMEKERRMFQLQM-------CEYLIKVN  173 (215)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhcchhhhhhhHHHHHHHHHHHHHHHH-------HHHHHHHH
Confidence            778887 99999999999888765555544332 11110       0122222333332222211       12255777


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 020634          220 AIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEM  258 (323)
Q Consensus       220 aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EM  258 (323)
                      .|++-+-.==|+.|++.+.|--+|++.-.++|++++-=|
T Consensus       174 ~lq~kKk~e~Le~ll~~~~Aq~~fF~~G~~ll~~l~p~~  212 (215)
T cd07604         174 EIKTKKGVDLLQHLVEYYHAQNSYFQDGLKVIEHFRPYI  212 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            788877777889999999999999999999999987543

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. This subfamily is composed of ASAPs (ArfGAP with SH3 domain, ANK repeat and PH domain containing proteins), which are Arf GTPase activating proteins (GAPs) with similarity to ACAPs (ArfGAP with Coiled-coil, ANK repeat and PH domain containing proteins) in that they contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, and ankyrin (ANK) repeats. However, ASAPs contain an additional C-terminal SH3 domain. ASAPs function in regulating cell growth, migration, and invasion. Vertebrates contain at least three members, ASAP1, ASAP2, and ASAP3. ASAP1 and ASAP2 shows GTPase activating protein (GAP) activity towards Arf1 and Arf5. They do not show GAP activity towards Arf6, but is able to mediate

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=97.55  E-value=7.2e-05  Score=53.13  Aligned_cols=33  Identities=24%  Similarity=0.284  Sum_probs=28.5

Q ss_pred             eccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          288 AIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       288 v~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      |+|+|.++.+.||||..||.|.|-.-.++||..
T Consensus         1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~   33 (49)
T PF14604_consen    1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWY   33 (49)
T ss_dssp             ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEE
T ss_pred             CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEE
Confidence            689999999999999999999998889999963

...

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=97.54  E-value=7.1e-05  Score=51.95  Aligned_cols=33  Identities=27%  Similarity=0.314  Sum_probs=30.3

Q ss_pred             eeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          287 EAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       287 ev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .|+++|+++.++|||+..||.|.|-+...+||.
T Consensus         1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   33 (48)
T PF00018_consen    1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWW   33 (48)
T ss_dssp             EESSCBETSSTTBSEB-TTEEEEEEEESSSSEE
T ss_pred             CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEE
Confidence            379999999999999999999999999999995

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>smart00326 SH3 Src homology 3 domains

Probab=97.53  E-value=7.7e-05  Score=49.83  Aligned_cols=37  Identities=24%  Similarity=0.277  Sum_probs=33.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.+.|+++|++..++||+|.+||.|.|-.-.++||..
T Consensus         3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~   39 (58)
T smart00326        3 PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWK   39 (58)
T ss_pred             cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEE
Confidence            5678999999999999999999999999998999963

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>KOG1118 consensus Lysophosphatidic acid acyltransferase endophilin/SH3GL, involved in synaptic vesicle formation [Lipid transport and metabolism; Signal transduction mechanisms]

Probab=97.47  E-value=0.011  Score=58.41  Aligned_cols=281  Identities=17%  Similarity=0.259  Sum_probs=161.6

Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCcceechH--HHH-----HHHHHHHHHhhhhc---------hhhhhHHHhhhhhhee
Q 020634           12 KEQVAKQQQAVIKQFSASGYERSDVMVIDEV--EMQ-----RHQQLEKLYRSTRG---------TKDFQRDLVKVAEVFT   75 (323)
Q Consensus        12 rEqVAkQQQAV~Kqf~~~gy~~~d~~v~DE~--Elq-----~hq~LekLY~STRa---------aKhFQrdIVRgvEGfi   75 (323)
                      +.|..|-+|-+=..|||.     ...=+|..  ||.     +.--+-+|+.+|--         ||----+++.-|-|-+
T Consensus         2 ~kqF~ka~Q~~sEK~gga-----e~TkLdDdF~eme~~vdvt~~~v~~i~~~tteylqpnpa~rakl~~~n~lsKvrG~~   76 (366)
T KOG1118|consen    2 KKQFNKASQWTSEKVGGA-----EGTKLDDDFLEMEKEVDVTSKGVTKILAKTTEYLQPNPASRAKLAMLNTLSKVRGQV   76 (366)
T ss_pred             chHHHHHHHHhccccccc-----cCCcCChHHHHHHHhHHHHHHHHHHHHHhhHHhcCCChhhhhHHHHHHHHHHhcccc
Confidence            456667777888888732     22223332  222     23345566666532         2222236777777777


Q ss_pred             ecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhh
Q 020634           76 AIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARH  155 (323)
Q Consensus        76 s~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARh  155 (323)
                      -+--++.+.| -|++---|||-|=+   .++.+..+-..||.+...|-.=.+.|---+---..+||.-.    -|-|++.
T Consensus        77 k~~~ypq~e~-~Lg~~mik~gkeLg---~dSs~g~tl~~~Gesm~~i~evk~sl~~~vkq~FldpL~~l----~~~elK~  148 (366)
T KOG1118|consen   77 KEKGYPQTEG-LLGDVMIKHGKELG---DDSSFGHTLIDAGESMREIGEVKDSLDDNVKQNFLDPLQNL----QLKELKD  148 (366)
T ss_pred             cCCCCccchh-HHHHHHHHHHHhcC---CCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh----hHHHHHH
Confidence            6655554432 46677789998865   22346778888999999988888888777777778888643    1334444


Q ss_pred             HHHHHHHHHHHHHHhHHHHHH-HHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHH
Q 020634          156 LAQRYSRMRQEAETQAVEVSK-RQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLV  234 (323)
Q Consensus       156 LaqRYdRmRQEaE~qa~eV~r-Rq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLi  234 (323)
                      +-+.-.+|  |-..+.-|-.+ |+-|     .+|  --|..|..|..|-|.-    -+.---++..++.-|    .+-|.
T Consensus       149 i~hh~KKL--EgRRldyD~kkkk~~K-----~~d--EelrqA~eKfEESkE~----aE~sM~nlle~d~eq----vsqL~  211 (366)
T KOG1118|consen  149 IQHHRKKL--EGRRLDYDYKKKKQGK-----IKD--EELRQALEKFEESKEL----AEDSMFNLLENDVEQ----VSQLS  211 (366)
T ss_pred             HHHHHHHh--hhhhhHHHHHHHHhcc-----CCh--HHHHHHHHHHHHHHHH----HHHHHHHHHhcCHHH----HHHHH
Confidence            43333222  11122222222 2222     222  2367788888775531    011112233334333    34578


Q ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHhhhhh------h----------cCCC--CCCCCC---------------------
Q 020634          235 AMVEGEKNYHLRIAAILGDVEAEMVSEKQR------K----------ESAP--PVIPSE---------------------  275 (323)
Q Consensus       235 aMVeaEr~YHqrv~~ILd~l~~EMvsE~q~------~----------Es~~--~~~~~~---------------------  275 (323)
                      ++|+++-.||+..+.||+.|.--.-+-...      .          +.+|  ||+..+                     
T Consensus       212 ~Li~aqLdfhrqs~~iL~~l~~~l~~r~r~a~~~prrey~p~~~~an~f~p~~~p~~~~g~~s~T~~t~~~ass~~~is~  291 (366)
T KOG1118|consen  212 ALIQAQLDFHRQSTQILQELQMKLFSRIRDASSQPRREYVPRSVLANEFAPSGPPIQLNGKLSKTTSTPQSASSPSNISP  291 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCchhhcCCcccccccCCCCCCccccCCCCCcCccCccccCCcccCCC
Confidence            999999999999999999998765432211      0          1110  110000                     


Q ss_pred             ------CCc-cchhheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhhhc
Q 020634          276 ------NSS-QKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQM  322 (323)
Q Consensus       276 ------~~~-~~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse~~  322 (323)
                            +++ ..+.-=.-.++..|+++.||||-|..||.+.|-.--.-+|-|-|
T Consensus       292 ~p~~~p~rs~s~~~~p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~  345 (366)
T KOG1118|consen  292 KPPSTPNRSASQMDQPCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGE  345 (366)
T ss_pred             CCCCCCCcccCcccchhheeeeccCCCCCCccCcccCceeeehhhcCcchhhhe
Confidence                  000 22233345789999999999999999999977554455676644

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=97.45  E-value=0.0001  Score=48.87  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=32.2

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++++|.+..++||+|.+||.|.|-+...+||..
T Consensus         2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~   36 (54)
T cd00174           2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWE   36 (54)
T ss_pred             EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEE
Confidence            47899999999999999999999999998899963

>cd07595 BAR_RhoGAP_Rich-like The Bin/Amphiphysin/Rvs (BAR) domain of Rich-like Rho GTPase Activating Proteins

Probab=97.44  E-value=0.025  Score=52.48  Aligned_cols=161  Identities=16%  Similarity=0.264  Sum_probs=109.6

Q ss_pred             hchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHH
Q 020634           87 KLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQE  166 (323)
Q Consensus        87 KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQE  166 (323)
                      -|+..--+||.+=+   .+..|.+|-..||.+-+.+=.+|.++-..+-+.|.+||+....+        --.-+.+-|.-
T Consensus        61 ~Lg~~M~~~g~~l~---~~s~lg~~L~~~g~a~~~ia~~~~~~d~~i~~~fl~pL~~~le~--------dik~i~k~RKk  129 (244)
T cd07595          61 GLAQSMLESSKELP---DDSLLGKVLKLCGEAQNTLARELVDHEMNVEEDVLSPLQNILEV--------EIPNIQKQKKR  129 (244)
T ss_pred             HHHHHHHHHHHhcC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH
Confidence            45665667777753   45579999999999999999999999999999999999987652        12345555665


Q ss_pred             HHHhH--HHHHHHHhh-h-ccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 020634          167 AETQA--VEVSKRQQR-V-REAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKN  242 (323)
Q Consensus       167 aE~qa--~eV~rRq~k-~-res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~  242 (323)
                      ++.-.  -|.+|++.+ . |+++...+..|....+..|.+...-+..---.|++.|-.|=+=-- =-+.-|..+|+|...
T Consensus       130 Le~~RLd~D~~k~r~~ka~k~~~~~~~~~K~~~l~eE~e~ae~k~e~~~e~~~~~M~~~l~~E~-e~~~~l~~lv~aQl~  208 (244)
T cd07595         130 LSKLVLDMDSARSRYNAAHKSSGGQGAAAKVDALKDEYEEAELKLEQCRDALATDMYEFLAKEA-EIASYLIDLIEAQRE  208 (244)
T ss_pred             HhhhhHHHHHHHHHHHhccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH-HHHHHHHHHHHHHHH
Confidence            55443  345555553 1 222223344555544555555555454444556666655433200 014568999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 020634          243 YHLRIAAILGDVEAEMV  259 (323)
Q Consensus       243 YHqrv~~ILd~l~~EMv  259 (323)
                      ||.+.++||+.+-.+|-
T Consensus       209 YH~~a~e~L~~l~~~l~  225 (244)
T cd07595         209 YHRTALSVLEAVLPELQ  225 (244)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999999987

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. This subfamily is composed of Rho and Rac GTPase activating proteins (GAPs) with similarity to GAP interacting with CIP4 homologs proteins (Rich). Members contain an N-terminal BAR domain, followed by a Rho GAP domain, and a C-terminal prolin-rich region. Vertebrates harbor at least three Rho GAPs in this subfamily including Rich1, Rich2, and SH3-domain binding protein 1 (SH3BP1). Rich1 and Rich2 play complementary roles in the establishment and maintenance of cell polarity. Rich1 is a Cdc42- and Rac-specific GAP that binds to polarity proteins through the scaffold protein angiomotin and plays a role in maintaining the integrity of tight junctions. Rich2 is a Rac GAP that interacts with CD317 and plays a role in actin cytoskeleton organization and

>cd07639 BAR_ACAP1 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 1

Probab=97.42  E-value=0.012  Score=53.59  Aligned_cols=179  Identities=12%  Similarity=0.191  Sum_probs=136.1

Q ss_pred             HHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHh
Q 020634           65 RDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAM  144 (323)
Q Consensus        65 rdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaM  144 (323)
                      ..|++.+=++|..|....--..+++..-+.+|.+.+   .+..++.+-..|+.+-..|++.|..|+.-...-+..||-..
T Consensus        19 ~kl~K~~k~~~~agk~~~~a~~~F~~~L~~f~~~~~---~D~~i~~~l~kFs~~l~ei~~~~~~Ll~~~~~~l~~~L~~F   95 (200)
T cd07639          19 EKLVKLGSGMLEGGRHYCAASRAFVDGLCDLAHHGP---KDPMMAECLEKFSDGLNHILDSHAELLEATQFSFKQQLQLL   95 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345566666777777777777788888888887643   33347788888999999999999999999999999999998


Q ss_pred             hcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 020634          145 ITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQ  224 (323)
Q Consensus       145 v~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQ  224 (323)
                      +.+ +|-+++-...+||+..+.-++-..--.+    ++  -+  -..-++.|+.-|.--++.-.-.-=+=+..+..|++-
T Consensus        96 ~k~-dl~~vKe~kK~FdK~s~~~d~al~K~~~----~~--k~--k~~e~~Ea~~~l~~~R~~F~~~~ldYV~~in~iq~k  166 (200)
T cd07639          96 VKE-DLRGFRDARKEFERGAESLEAALQHNAE----TP--RR--KAQEVEEAAAALLGARATFRDRALDYALQINVIEDK  166 (200)
T ss_pred             HHh-hhHHHHHHhhhHhhcchhHHHHHHHHhh----cc--cc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            876 6788999999999999988875322221    11  01  011346666677766776666666667777777777


Q ss_pred             hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          225 QHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       225 QQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      .-=-=|+.|++.+.|=.+|.+.--++|++|+
T Consensus       167 Kkfefle~ll~~m~a~~tfF~qG~ell~~l~  197 (200)
T cd07639         167 KKFDILEFMLQLMEAQASFFQQGHEALSALH  197 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            7777789999999999999999999999886

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. ACAP1 (ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 1), also called centaurin beta-1, is an Arf6-specific GTPase activating protein (GAP) which mediates Arf6 signaling. Arf6 is involved in the regulation of endocytosis, phagocytosis, cell adhesion and migration. ACAP1 also participates in the cargo sorting and recycling of the transferrin receptor and integrin beta1. It may also play a role in innate immune responses. ACAP1 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, and C-terminal ankyrin (ANK) repeats. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07594 BAR_Endophilin_B The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B

Probab=97.25  E-value=0.078  Score=49.20  Aligned_cols=185  Identities=18%  Similarity=0.274  Sum_probs=125.7

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheee--------------------cccchhhhhhhchhhhhhhccCCCCCCccc
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTA--------------------IGYKHIEAGTKLSEDCCRYGAENNQNINEN  106 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis--------------------~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~  106 (323)
                      ..+||+-.-+|+.+=   -+|.+..+.|+-                    .++-+.|   -|++-.-+||.+=.   .++
T Consensus        19 f~~le~~~d~~~~~~---e~i~~~~~~~lqpNp~~r~~~~~~~k~~~~~~~~~~~~e---~Lg~~M~~~g~~lg---~~S   89 (229)
T cd07594          19 FENLLQRADKTKVWT---EKILKQTEAVLQPNPNVRVEDFIYEKLDRKKPDRLSNLE---QLGQAMIEAGNDFG---PGT   89 (229)
T ss_pred             HHHHHHHHHHHHHHH---HHHHHHHHHHhCCChhhhHHHHHHHHhhcccCCCCCcHH---HHHHHHHHHHhhCC---CCC
Confidence            456777777776543   366666666662                    1233333   68888999999854   456


Q ss_pred             hhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCC
Q 020634          107 ILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPN  186 (323)
Q Consensus       107 ~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n  186 (323)
                      .++.|-..||.|...|=.-|..+.-.+.+-+.+||+....+-        -.-|..-|.-+|.--.+.--.++|.+-+.+
T Consensus        90 ~~g~aL~~~g~a~~kia~~~~~~~~~i~~~fl~pL~~~l~~d--------ik~i~k~RKkLe~rRLd~D~~k~r~~kAk~  161 (229)
T cd07594          90 AYGSALIKVGQAQKKLGQAEREFIQTSSSNFLQPLRNFLEGD--------MKTISKERKLLENKRLDLDACKTRVKKAKS  161 (229)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            799999999999999999999999999999999999876531        123455566666555444333334432222


Q ss_pred             ----hhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 020634          187 ----PENVAKLHAAEARMQELKANMAILGKEAAAALAAIEA-QQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAE  257 (323)
Q Consensus       187 ----~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEa-QQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~E  257 (323)
                          +..-..|+.|+.|..+-+.       .|...|-.|-. .--  -+.-|-+.|+|+-+||....+||..|..+
T Consensus       162 ~~~~~~~e~elr~Ae~kF~~~~E-------~a~~~M~~i~~~~~~--~~~~L~~lv~AQl~Yh~q~~e~L~~l~~~  228 (229)
T cd07594         162 AEAIEQAEQDLRVAQSEFDRQAE-------ITKLLLEGISSTHAN--HLRCLRDFVEAQMTYYAQCYQYMDDLQRQ  228 (229)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHH-------HHHHHHHHHHhcCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                3345667778888776543       33344443322 111  24568899999999999999999999764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Vertebrates contain two endophilin-B isoforms. Endophilin-B proteins are cytoplasmic proteins expressed mainly in the heart, placenta, and skeletal muscle.

>cd07616 BAR_Endophilin_B1 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1

Probab=97.17  E-value=0.029  Score=52.28  Aligned_cols=184  Identities=16%  Similarity=0.206  Sum_probs=124.5

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheee-------------------cccchhhhhhhchhhhhhhccCCCCCCccch
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTA-------------------IGYKHIEAGTKLSEDCCRYGAENNQNINENI  107 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis-------------------~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~  107 (323)
                      .++|+|---+|+.+   =.+|++.+|-++-                   .++++-  ..-|++..-+||.+=.   .++.
T Consensus        19 f~~l~~~~d~t~~~---~~~i~~~t~~~LqPNp~~r~e~~~~~k~~~~~~~~~~~--~~~Lg~~M~~~g~~~g---~~S~   90 (229)
T cd07616          19 LENLLSKAECTKHW---TEKIMKQTEVLLQPNPNARIEEFVYEKLDRKAPSRMNN--PELLGQYMIDAGNEFG---PGTA   90 (229)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHhCCCchhhHHHHHHHHHhccCCCCCCh--HHHHHHHHHHHHHhcC---CCCc
Confidence            45677776666543   3456655554442                   234433  3568888999999954   4567


Q ss_pred             hhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCC--
Q 020634          108 LPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAP--  185 (323)
Q Consensus       108 LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~--  185 (323)
                      |..|-..||.|.+.|=.-|..|.....+-+.+|||.-..+        --..|..-|.-+|.--.+.--.++|.+-+.  
T Consensus        91 ~G~aL~~~g~a~~kia~~~~~~i~~~~~~Fl~PL~~~le~--------dik~i~k~RKkLe~rRLdyD~~K~r~~kAk~~  162 (229)
T cd07616          91 YGNALIKCGETQKQIGTADRELIQTSAINFLTPLRNFIEG--------DYKTITKERKLLQNKRLDLDAAKTRLKKAKVA  162 (229)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            9999999999999999999999998888999999998876        223456667777766554433333333221  


Q ss_pred             --ChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHH---HHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 020634          186 --NPENVAKLHAAEARMQELKANMAILGKEAAAALAAIE---AQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAE  257 (323)
Q Consensus       186 --n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVE---aQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~E  257 (323)
                        .+..-.+|..||.|+.+-+.-+       ...|--|-   +-    -+.=|.+.|+|.-.||....+||..|..+
T Consensus       163 ~~~~~~e~elr~ae~efees~E~a-------~~~m~~i~~~~~e----~~~~L~~lv~AQl~Yh~~~~e~L~~L~~~  228 (229)
T cd07616         163 EARAAAEQELRITQSEFDRQAEIT-------RLLLEGISSTHAH----HLRCLNDFVEAQMTYYAQCYQYMLDLQKQ  228 (229)
T ss_pred             hhhcchHHHHHHHHHHHHHHHHHH-------HHHHHhhhhcChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence              3334556777888887654322       22222221   11    24568899999999999999999999865

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Endophilin-B proteins are cytoplasmic proteins expressed mainly in the heart, placenta, and skeletal muscle. Endophilin-B1, also called Bax-interacting factor 1 (Bif-1) or SH3GLB1 (SH3-domain GRB2-like endophilin B1), is localized mainly to the Golgi apparatus. It is involved in the regulation of many biological events including autophagy, tumorigenesis, nerve growth fact

>cd07603 BAR_ACAPs The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing proteins

Probab=97.13  E-value=0.082  Score=47.73  Aligned_cols=182  Identities=9%  Similarity=0.168  Sum_probs=133.0

Q ss_pred             hhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHH
Q 020634           62 DFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPL  141 (323)
Q Consensus        62 hFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePL  141 (323)
                      ++=..|++++=++|..|.....-...++..-..+|.+   |..+..++-+-..||.+-..|+..|..|+.-...-|.+||
T Consensus        16 ~~l~kl~K~~~~~~~ag~~~~~a~~~F~~~L~~~~~~---~~~d~~i~~~l~kF~~~l~el~~~~~~L~~q~~~~i~~pL   92 (200)
T cd07603          16 TRLEKLLKLCNGMVDSGKTYVNANSLFVNSLNDLSDY---FRDDSLVQNCLNKFIQALQEMNNFHTILLDQAQRTVSTQL   92 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445566777777777777777777788877788876   3345568888889999999999999999999999999999


Q ss_pred             HHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 020634          142 RAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAI  221 (323)
Q Consensus       142 RaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aV  221 (323)
                      +..+.+ .|-+.+-+..+||+....-++-..--+. ..|.|    |   .-++.|+.-|..-++.---.-=+=..++..|
T Consensus        93 ~~F~k~-dL~~vKE~kk~Fdk~s~~yd~al~k~~~-~~K~K----~---~~~~Ea~~~L~~~Rk~f~~~sldyv~~in~i  163 (200)
T cd07603          93 QNFVKE-DIKKVKESKKHFEKISDDLDNALVKNAQ-APRSK----P---QEAEEATNILTATRSCFRHTALDYVLQINVL  163 (200)
T ss_pred             HHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCC----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999987 5678899999999999988875442111 22222    1   1234444555555555444444556677777


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          222 EAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       222 EaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      .+-.-=-=|+.|++.+.|=-+|.+.-.+++++|+
T Consensus       164 q~kKk~e~le~ll~~~~A~~tff~qG~el~~dl~  197 (200)
T cd07603         164 QAKKRHEILSTLLSYMHAQFTFFHQGYDLLEDLE  197 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence            7766666788888888898888888888887764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. This subfamily is composed of ACAPs (ArfGAP with Coiled-coil, ANK repeat and PH domain containing proteins), which are Arf GTPase activating proteins (GAPs) containing an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, and C-terminal ankyrin (ANK) repeats. Vertebrates contain at least three members, ACAP1, ACAP2, and ACAP3. ACAP1 and ACAP2 are Arf6-specific GAPs, involved in the regulation of endocytosis, phagocytosis, cell adhesion and migration, by mediating Arf6 signaling. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07619 BAR_Rich2 The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP interacting with CIP4 homologs protein 2

Probab=97.11  E-value=0.053  Score=51.18  Aligned_cols=198  Identities=15%  Similarity=0.190  Sum_probs=123.0

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheeec--ccchhhhhh-----hchhhhhhhccCCCCCCccchhhHHHHHhhHhh
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTAI--GYKHIEAGT-----KLSEDCCRYGAENNQNINENILPKAAAIYGDAR  119 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis~--gsKq~Ei~~-----KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~  119 (323)
                      .++|||---+|+.+   =-+|++-.+.++--  |+.-=-..+     -|++.+-+||.+=+   .++.|.+|-..||.+-
T Consensus        17 ~~~le~r~D~~k~~---~~~i~kk~~~~LQpnp~~r~ekr~~k~P~~~L~q~M~~~g~elg---~~s~lg~aL~~~gea~   90 (248)
T cd07619          17 LLQVEKRLELVKQV---SHSTHKKLTACLQGQQGVDADKRSKKLPLTTLAQCMVEGAAVLG---DDSLLGKMLKLCGETE   90 (248)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHhCCCcHHHHHHhccCCCHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHH
Confidence            46777776666544   44777777776532  111111122     48999999999964   4567999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhh--ccCC---Chh-hhhhh
Q 020634          120 KHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRV--REAP---NPE-NVAKL  193 (323)
Q Consensus       120 ~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~--res~---n~e-~~~KL  193 (323)
                      +.|=.+|-++--.+-..|.+||+....+- |-.+-|-...-...|-+.     |..|+|.+.  +.++   |.+ +..|.
T Consensus        91 ~kla~a~~~~d~~i~~~fl~PL~~~le~d-lk~I~k~RK~Le~~RLD~-----D~~K~r~~~a~~~~~~~~~~~~~~~k~  164 (248)
T cd07619          91 DKLAQELILFELQIERDVVEPLYVLAEVE-IPNIQKQRKHLAKLVLDM-----DSSRTRWQQSSKSSGLSSNLQPTGAKA  164 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHhhHhhH-----HHHHHHHHhccccccccccccCCCCcc
Confidence            99999999999999999999999887743 222222222333333332     234444331  1111   111 13344


Q ss_pred             HHHHHHHHHHHHHHH----HhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q 020634          194 HAAEARMQELKANMA----ILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSE  261 (323)
Q Consensus       194 q~AE~Kl~ELks~Ma----~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EMvsE  261 (323)
                      +.+...+.+....+.    .+=-++..-|.-+..|=..     |+..|+|=-.||.+.++||+.+..+|-.=
T Consensus       165 e~lr~e~E~ae~~~e~~kd~~~~~m~~~l~~e~e~~~~-----l~~Lv~AQleYHr~A~eiLe~l~~~i~~~  231 (248)
T cd07619         165 DALREEMEEAANRMEICRDQLSADMYSFVAKEIDYANY-----FQTLIEVQAEYHRKSLELLQSVLPQIKAH  231 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444444444    2223333334444443322     99999999999999999999999988543

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. RhoGAP interacting with CIP4 homologs protein 2 (Rich2) is a Rho GTPase activating protein that interacts with CD317, a lipid raft-associated integral membrane protein. It plays a role in actin cytoskeleton organization and the maintenance of microvilli in polarized epithelial cells. Rich2 contains an N-terminal BAR domain followed by a GAP domain for Rho and Rac GTPases and a C-terminal proline-rich domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07606 BAR_SFC_plant The Bin/Amphiphysin/Rvs (BAR) domain of the plant protein SCARFACE (SFC)

Probab=97.09  E-value=0.044  Score=49.83  Aligned_cols=183  Identities=15%  Similarity=0.232  Sum_probs=136.5

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhh----HHHHHhhHhhHHH
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILP----KAAAIYGDARKHV  122 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~La----rAa~~yg~a~~~m  122 (323)
                      ...|+|||.+-+.--+=+++...              -...+|..-..||.. +   .+.++.    .+-..|+.+-..|
T Consensus        14 ~~~~~Kl~K~~~~~~~a~~~~~~--------------a~~~Fa~~L~~f~~~-~---dD~~~~a~gg~~l~kF~~~l~ei   75 (202)
T cd07606          14 RDRSLKLYKGCRKYRDALGEAYD--------------GDSAFAESLEEFGGG-H---DDPISVAVGGPVMTKFTSALREI   75 (202)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHhcCC-C---CChHHHhccchHHHHHHHHHHHH
Confidence            35677887776653332232222              223344444555532 2   232332    4567799999999


Q ss_pred             HHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHH
Q 020634          123 EKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQE  202 (323)
Q Consensus       123 EkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~E  202 (323)
                      +..|+.|+.-...-+..||...+. --|-+++-+..+||+-..+-++-..-.+.-..+.|    |   .+++.|+..|.-
T Consensus        76 ~~~~~~L~~q~~~~l~~pL~~F~k-~Dl~~vKe~kK~FdK~s~~yd~al~K~~~l~k~~k----~---~~~~ea~~~l~~  147 (202)
T cd07606          76 GSYKEVLRSQVEHMLNDRLAQFAD-TDLQEVKDARRRFDKASLDYEQARSKFLSLTKDAK----P---EILAAAEEDLGT  147 (202)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCc----h---HHHHHHHHHHHH
Confidence            999999999999999999999998 46778999999999999999986665554333222    1   246788888888


Q ss_pred             HHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          203 LKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       203 Lks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      .+++.--..-+=..++..|++-.-==.|+.|++.+.|=-+|++.-.++|.+|+
T Consensus       148 ~R~~F~~~~ldyv~~ln~~q~kKk~e~le~ll~~m~A~~tFF~qG~ell~~l~  200 (202)
T cd07606         148 TRSAFETARFDLMNRLHAADARKRVEFLERLSGSMDAHLAFFKSGYELLRQLE  200 (202)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            88888888888889999999988888899999999999999999999988764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. The plant protein SCARFACE (SFC), also called VAscular Network 3 (VAN3), is a plant ACAP (ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein), an Arf GTPase Activating Protein (GAP) that plays a role in the trafficking of auxin efflux regulators from the plasma membrane to the endosome. It is required for the normal vein patterning in leaves. SCF contains an N-terminal BAR domain, followed by a Pleckstrin Homology (PH) domain, an Arf GAP domain, and C-terminal ankyrin (ANK) repeats. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07592 BAR_Endophilin_A The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A

Probab=97.06  E-value=0.056  Score=49.83  Aligned_cols=150  Identities=21%  Similarity=0.367  Sum_probs=103.9

Q ss_pred             hhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHH
Q 020634           86 TKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQ  165 (323)
Q Consensus        86 ~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQ  165 (323)
                      .-|++.+-+||.+=.   .++.++.|-..||.|..++=..|..+--.+.+-+.+||+.-..+-        -..|...|.
T Consensus        67 ~~Lg~~M~~~g~elg---~~S~~G~aL~~~g~a~~kIa~~~~~~d~~v~~~fl~pL~~~l~~d--------ik~i~k~RK  135 (223)
T cd07592          67 GLLGEVMLKYGRELG---EDSNFGQALVEVGEALKQLAEVKDSLDDNVKQNFLDPLQQLQDKD--------LKEINHHRK  135 (223)
T ss_pred             cHHHHHHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHH
Confidence            568999999999964   445799999999999999999999999999999999999654321        124555666


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhHH
Q 020634          166 EAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEA-QQHRLTFQRLVAMVEGEKNYH  244 (323)
Q Consensus       166 EaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEa-QQQrlTlQRLiaMVeaEr~YH  244 (323)
                      -+|.--.+.--.++|...  .++  .-|..||.|+.+-+.-       |...|-.+=. .--  -+.=|..+|+|...||
T Consensus       136 kLe~rRLdyD~~k~k~~k--~~e--eEl~~Ae~kfe~s~E~-------a~~~M~~il~~e~e--~~~~L~~lveAQl~Yh  202 (223)
T cd07592         136 KLEGRRLDYDYKKRKQGK--GPD--EELKQAEEKFEESKEL-------AENSMFNLLENDVE--QVSQLSALVEAQLDYH  202 (223)
T ss_pred             HHHHHHHHHHHHHHhccc--Cch--HHHHHHHHHHHHHHHH-------HHHHHHHHHhCchH--HHHHHHHHHHHHHHHH
Confidence            666554443322223221  222  3366788887765432       2223322211 001  1345889999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 020634          245 LRIAAILGDVEAEMV  259 (323)
Q Consensus       245 qrv~~ILd~l~~EMv  259 (323)
                      ...++||..|..+|-
T Consensus       203 ~~~~e~L~~l~~~L~  217 (223)
T cd07592         203 RQSAEILEELQSKLQ  217 (223)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999986

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins are accessory proteins, localized at synapses, which interact with the endocytic proteins, dynamin and synaptojanin. They are essential for synaptic vesicle formation from the plasma membrane. They interact with voltage-gated calcium channels, thus linking vesicle endocytosis to calcium regulation. They also play roles in virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Vertebrates contain three endophilin-A isoforms. Endophilin-A proteins are enriched in the bra

>cd07634 BAR_GAP10-like The Bin/Amphiphysin/Rvs (BAR) domain of Rho GTPase activating protein 10-like

Probab=97.01  E-value=0.058  Score=49.75  Aligned_cols=185  Identities=11%  Similarity=0.138  Sum_probs=127.1

Q ss_pred             hhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCC--CCccc-hhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhh
Q 020634           63 FQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQ--NINEN-ILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLD  139 (323)
Q Consensus        63 FQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~--~~~~~-~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~e  139 (323)
                      |=++||+..=++|..|..=.---.+++.--+.+|-+-..  .+.+. .++-+-..|+.--+.|+.+|+.|+.-...-|..
T Consensus        17 ~ik~liK~c~~li~A~k~~~~a~~~Fa~sL~~f~~~~igd~~tDde~~i~~~l~~Fs~~l~el~~~~~~L~~~~~~~l~~   96 (207)
T cd07634          17 FIKELIKDGSLLIGALRNLSMAVQKFSQSLQDFQFECIGDAETDDEISIAQSLKEFARLLIAVEEERRRLIQNANDVLIA   96 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334455555555555443333334444444444433110  11222 588899999999999999999999999999999


Q ss_pred             HHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 020634          140 PLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALA  219 (323)
Q Consensus       140 PLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~  219 (323)
                      ||-..+.+ +|-+++-...+||+-...-++-..--..-..+.+       -.-++.|+.-|.--++.---.-=+=+-.+.
T Consensus        97 pL~~f~k~-dl~~vKe~kK~FDK~se~y~~aleK~l~l~~~kk-------~~~~~ea~~~l~~~R~~F~~~~ldYv~~i~  168 (207)
T cd07634          97 PLEKFRKE-QIGAAKDGKKKFDKESEKYYSILEKHLNLSAKKK-------ESHLQRADTQIDREHQNFYEASLEYVFKIQ  168 (207)
T ss_pred             HHHHHHHH-HHHHHHHHccchhHHHhHHHHHHHHHHhccccCC-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999876 5788999999999999998763322111111111       124567777777777665555556666777


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          220 AIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       220 aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      .|++-.-===|+.|++.+.|=.+|.+.-.+++++++
T Consensus       169 ~vq~kKkfefle~ll~~~~A~~tff~qG~el~~dl~  204 (207)
T cd07634         169 EVQEKKKFEFVEPLLAFLQGLFTFYHEGYELAQEFA  204 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence            777766666788999999999999999999888875

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. This group is composed of uncharacterized proteins called Rho GTPase activating protein (GAP) 10-like. GAP10-like may be a GAP with activity towards RhoA and Cdc42. Similar to GRAF and GRAF2, it contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions. The BAR domains of the related proteins GRAF and OPHN1, directly interact with their Rho GAP domains and inhibit theiractivity. The autoinhibited proteins are capable of binding membranes and tubulating liposomes, showing that the membrane-tubulation and GAP-inhibitory functions of the BAR domain

>cd07637 BAR_ACAP3 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 3

Probab=96.97  E-value=0.088  Score=47.76  Aligned_cols=143  Identities=9%  Similarity=0.231  Sum_probs=112.2

Q ss_pred             ccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhcc
Q 020634          104 NENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVRE  183 (323)
Q Consensus       104 ~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~re  183 (323)
                      .+..++.+-..||.+-..|+..|..|+.-...-+.+||+.-+.+ .|-..+-+..+||+....-++-..-.+  ++|.+ 
T Consensus        55 gd~~i~~~L~kF~~~l~ei~~~~~~l~~q~e~~l~~pL~~F~k~-dL~~~KE~rK~Fdk~se~yd~al~k~~--~~k~k-  130 (200)
T cd07637          55 KDEMISECLDKFGDSLQEMVNYHMILFDQAQRSVRQQLHSFVKE-DVRKFKETKKQFDKVREDLEIALVKNA--QAPRH-  130 (200)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCC-
Confidence            44467788888999999999999999999999999999999886 567788999999999988876655432  23322 


Q ss_pred             CCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          184 APNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       184 s~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                        .|   .-|+.|+.-|.+-+++---.-=+=..++..|++-.-=-=|+.|++.+.|=-+|+..--++|++|+
T Consensus       131 --k~---~~l~Ea~~~L~~~Rk~f~~asLdyv~~ln~iq~kKk~e~le~ll~~~~a~~tff~qG~el~~~~~  197 (200)
T cd07637         131 --KP---HEVEEATSTLTITRKCFRHLALDYVLQINVLQAKKKFEILDSMLSFMHAQYTFFQQGYSLLHELD  197 (200)
T ss_pred             --Ch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence              12   23466666666666666555556677888888877777789999999999999999999999886

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. ACAP3 (ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 3), also called centaurin beta-5, is presumed to be an Arf GTPase activating protein (GAP) based on its similarity to the Arf6-specific GAPs ACAP1 and ACAP2. The specific function of ACAP3 is still unknown. ACAP3 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, and C-terminal ankyrin (ANK) repeats. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07602 BAR_RhoGAP_OPHN1-like The Bin/Amphiphysin/Rvs (BAR) domain of Oligophrenin1-like Rho GTPase Activating Proteins

Probab=96.94  E-value=0.076  Score=48.86  Aligned_cols=184  Identities=12%  Similarity=0.178  Sum_probs=127.7

Q ss_pred             hHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCC--CCcc-chhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhH
Q 020634           64 QRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQ--NINE-NILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDP  140 (323)
Q Consensus        64 QrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~--~~~~-~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~eP  140 (323)
                      =+.||++.=++|..|..-.-.-..++..-+-|+-+-..  .+.+ ..++.+-..||..-..||.+|+.|+.-....+..|
T Consensus        18 ikkLiK~ck~~i~a~k~~~~a~~~F~~~L~~f~~~~~g~~~tDDe~~i~~~L~kF~~~l~ei~~~r~~L~~q~~~~l~~p   97 (207)
T cd07602          18 IKELIKECKNLISATKNLSKAQRSFAQTLQNFKFECIGETQTDDEIEIAESLKEFGRLIETVEDERDRMLENAEEQLIEP   97 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455555556655555444555566666666644110  0122 13677888999999999999999999999999999


Q ss_pred             HHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 020634          141 LRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAA  220 (323)
Q Consensus       141 LRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~a  220 (323)
                      |..-+. -.|-+++-...+||+-..+-+.-..--+.=..|.|+       .-++.|+.-|.--+++---.-=+=+.++..
T Consensus        98 L~~F~k-~dl~~~ke~kk~FdK~se~~~~al~k~~~lsk~kk~-------~~~~ea~~~l~~~r~~f~~~~l~Yv~~l~~  169 (207)
T cd07602          98 LEKFRK-EQIGGAKEEKKKFDKETEKFCSSLEKHLNLSTKKKE-------NQLQEADAQLDMERRNFHQASLEYVFKLQE  169 (207)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999987 788999999999999999888765433221111111       135556666665555555555556677777


Q ss_pred             HHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          221 IEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       221 VEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      |++-..===|+.|++.+.|=-+|...--+++.+++
T Consensus       170 vq~rKkfefle~ll~~m~a~~tff~qG~el~~d~~  204 (207)
T cd07602         170 VQERKKFEFVETLLSFMYGWLTFYHQGHEVAKDFK  204 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence            77776666678888889999888888888877765

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. This subfamily is composed of Rho and Rac GTPase activating proteins (GAPs) with similarity to oligophrenin1 (OPHN1). Members contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, and a Rho GAP domain. Some members contain a C-terminal SH3 domain. Vertebrates harbor at least three Rho GAPs in this subfamily including OPHN1, GTPase Regulator Associated with Focal adhesion kinase (GRAF), GRAF2, and an uncharacterized protein called GAP10-like. OPHN1, GRAF and GRAF2 show GAP activity towards RhoA and Cdc42. In addition, OPHN1 is active towards Rac. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions. The BAR domains of OPHN1

>cd07600 BAR_Gvp36 The Bin/Amphiphysin/Rvs (BAR) domain of Saccharomyces cerevisiae Golgi vesicle protein of 36 kDa and similar proteins

Probab=96.91  E-value=0.069  Score=49.85  Aligned_cols=222  Identities=18%  Similarity=0.250  Sum_probs=137.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCcc--eechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchh-hhhhhch
Q 020634           13 EQVAKQQQAVIKQFSASGYERSDVM--VIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHI-EAGTKLS   89 (323)
Q Consensus        13 EqVAkQQQAV~Kqf~~~gy~~~d~~--v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~-Ei~~KLa   89 (323)
                      +.|=+-=+.|-++|..-||--.-++  .+.+---.-+.+...|=..| ...+.|.-++-     -.++.|+- -...-|+
T Consensus        11 k~~~~~~l~vt~~ye~esYDYP~n~~es~~~~~~~~~~k~~~l~~~t-~~~e~~~~l~~-----~~~~~~~pkTl~~aLs   84 (242)
T cd07600          11 KLVYKKILKVTKTYENESYDYPPNLTESISDFSKTIGSKVSELSKAT-SPTEAQKVLLG-----TPAPAKLPKTLNHALS   84 (242)
T ss_pred             HHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHhhHHHHHHHhhcC-ChhhhhhhhcC-----CCCCCCCCCcHHHHHH
Confidence            4555556788899998888322111  12222222344554444444 34455555431     11112111 1234567


Q ss_pred             hhhhhhccCCCCC--CccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHH
Q 020634           90 EDCCRYGAENNQN--INENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA  167 (323)
Q Consensus        90 eDc~KYG~en~~~--~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEa  167 (323)
                      ..+-++|.+-..+  .+++.|++|-..||.+...|=.-|..+-..+.+-+.+||+.-+.+-        -..+.+.|.-+
T Consensus        85 ~~m~~~~~~l~~~~~~~~s~lg~aL~~~g~a~~kIa~ar~~~D~~I~~~Fl~pL~~~L~~d--------~k~i~k~RKkl  156 (242)
T cd07600          85 RAALASSLELKSLEPEDEDPLSKALGKYSDAEEKIAEARLEQDQLIQKEFNAKLRETLNTS--------FQKAHKARKKV  156 (242)
T ss_pred             HHHHHHHHHhCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH
Confidence            7776777664310  2367899999999999999999999999999999999999876532        23566777777


Q ss_pred             HHhHHHHHHHHhhhccCC----ChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhH
Q 020634          168 ETQAVEVSKRQQRVREAP----NPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNY  243 (323)
Q Consensus       168 E~qa~eV~rRq~k~res~----n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~Y  243 (323)
                      |.--.+.--.+.|.+...    ..+--..++.||.++.+-+       -.|.-.|..|-.-=  =-++=|..+|+|.-.|
T Consensus       157 e~~RLd~D~~K~~~~ka~~~~k~~~~~~e~E~aEdef~~a~-------E~a~~~M~~il~~~--e~i~~L~~fv~AQl~Y  227 (242)
T cd07600         157 EDKRLQLDTARAELKSAEPAEKQEAARVEVETAEDEFVSAT-------EEAVELMKEVLDNP--EPLQLLKELVKAQLAY  227 (242)
T ss_pred             HHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHhH-------HHHHHHHHHHHhhh--HHHHHHHHHHHHHHHH
Confidence            766554433333333221    2233445667777776655       24444555443321  1367788999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 020634          244 HLRIAAILGDVEAE  257 (323)
Q Consensus       244 Hqrv~~ILd~l~~E  257 (323)
                      |....+||..|..+
T Consensus       228 h~~~~e~L~~l~~~  241 (242)
T cd07600         228 HKTAAELLEELLSV  241 (242)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999998764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. Proteomic analysis shows that Golgi vesicle protein of 36 kDa (Gvp36) may be involved in vesicular trafficking and nutritional adaptation. A Saccharomyces cerevisiae strain deficient in Gvp36 shows defects in growth, in actin cytoskeleton polarization, in endocytosis, in vacuolar biogenesis, and in the cell cycle. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07593 BAR_MUG137_fungi The Bin/Amphiphysin/Rvs (BAR) domain of Schizosaccharomyces pombe Meiotically Up-regulated Gene 137 protein and similar proteins

Probab=96.88  E-value=0.15  Score=46.91  Aligned_cols=152  Identities=18%  Similarity=0.297  Sum_probs=106.0

Q ss_pred             hhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHH
Q 020634           85 GTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMR  164 (323)
Q Consensus        85 ~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmR  164 (323)
                      ..-|++.--.||.+=+   .++.+..|-..||.|.++|-..++.|..-+.+-+.+||+-.+.     |-+    -|..-|
T Consensus        53 ~~~Lg~~M~~~g~~lg---~dS~~G~aL~~~G~a~~kia~~q~~f~~~~~~~~l~pL~~~l~-----~~k----~i~k~R  120 (215)
T cd07593          53 VEALGLVMINHGEEFP---QDSEYGSCLSKLGRAHCKIGTLQEEFADRLSDTFLANIERSLA-----EMK----EYHSAR  120 (215)
T ss_pred             HHHHHHHHHHHHhhCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHH----HHHHHH
Confidence            4457777778888854   4567999999999999999999999999999999999986652     222    466777


Q ss_pred             HHHHHhHHHHHHHHhhhccCC--ChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhh
Q 020634          165 QEAETQAVEVSKRQQRVREAP--NPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEA-QQHRLTFQRLVAMVEGEK  241 (323)
Q Consensus       165 QEaE~qa~eV~rRq~k~res~--n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEa-QQQrlTlQRLiaMVeaEr  241 (323)
                      .-+|.--.+.--.++|.+.+.  .+.--.-|+.|+.|..+-+.-       |...|-.|-. .--  -+.=|...|+|.-
T Consensus       121 KkLe~rRLdyD~~ksk~~kak~~~~~~eeElr~Ae~kfees~E~-------a~~~M~~i~~~e~e--~~~~L~~lv~AQl  191 (215)
T cd07593         121 KKLESRRLAYDAALTKSQKAKKEDSRLEEELRRAKAKYEESSED-------VEARMVAIKESEAD--QYRDLTDLLDAEL  191 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHH-------HHHHHHHHHhcChH--HHHHHHHHHHHHH
Confidence            777776666655555554332  222234456677777665443       3333333321 111  1345788999999


Q ss_pred             hHHHHHHHHHHHHHHH
Q 020634          242 NYHLRIAAILGDVEAE  257 (323)
Q Consensus       242 ~YHqrv~~ILd~l~~E  257 (323)
                      .||...++||..|..+
T Consensus       192 ~Yh~q~~e~L~~l~~~  207 (215)
T cd07593         192 DYHQQSLDVLREVRQS  207 (215)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999864

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. This subfamily is composed predominantly of uncharacterized fungal proteins with similarity to Schizosaccharomyces pombe Meiotically Up-regulated Gene 137 protein (MUG137), which may play a role in meiosis and sporulation in fission yeast. MUG137 contains an N-terminal BAR domain and a C-terminal SH3 domain, similar to endophilins. Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be invol

>cd07613 BAR_Endophilin_A1 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A1

Probab=96.84  E-value=0.085  Score=49.09  Aligned_cols=146  Identities=19%  Similarity=0.319  Sum_probs=102.0

Q ss_pred             hhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHH
Q 020634           86 TKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQ  165 (323)
Q Consensus        86 ~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQ  165 (323)
                      .-|++.--+||.+=.   .++.+..|-..||.|.++|=..+..+--...+-+.+||+....+-        -.-|..-|.
T Consensus        67 ~~Lg~~M~~~G~elg---~dS~~G~aL~~~G~A~~kla~~~~~~~~~i~~~fl~PL~~~~~~d--------ik~i~k~RK  135 (223)
T cd07613          67 ALLAEAMLKFGRELG---DECNFGPALGDVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKD--------LREIQHHLK  135 (223)
T ss_pred             hHHHHHHHHHHhhCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHH
Confidence            446777778898864   456799999999999999999999999999999999999864331        113444555


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHH-----HhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 020634          166 EAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMA-----ILGKEAAAALAAIEAQQHRLTFQRLVAMVEGE  240 (323)
Q Consensus       166 EaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma-----~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaE  240 (323)
                      -.|..-.+.--.+.|.  ...+  -.-|+.|+.|..+-+.-..     +|..|+         -|    +.=|.+.|||+
T Consensus       136 kLe~rRLd~D~~K~r~--~k~~--eeElr~A~~kFees~E~a~~~M~n~l~~e~---------e~----~~~L~~fveAQ  198 (223)
T cd07613         136 KLEGRRLDFDYKKKRQ--GKIP--DEELRQALEKFDESKEIAESSMFNLLEMDI---------EQ----VSQLSALVQAQ  198 (223)
T ss_pred             HHHHHHHhHHHHHHhC--CCCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCc---------hH----HHHHHHHHHHH
Confidence            5554443333222222  2212  2347788888887665332     333322         12    23688999999


Q ss_pred             hhHHHHHHHHHHHHHHHHH
Q 020634          241 KNYHLRIAAILGDVEAEMV  259 (323)
Q Consensus       241 r~YHqrv~~ILd~l~~EMv  259 (323)
                      -.||...++||..|..++.
T Consensus       199 l~Yh~qa~eiL~~l~~~l~  217 (223)
T cd07613         199 LEYHKQATQILQQVTVKLE  217 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999886

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Vertebrates contain three endophilin-A isoforms. Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated endocytosis. Endophilin-A1 (or endophilin-1) is also referred to as SH3P4 (SH3 domain containing protein 4) or SH3GL2 (SH3 domain containing Grb2-like protein 2). It is localized in presynaptic nerve terminals. It plays many roles i

>cd07617 BAR_Endophilin_B2 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B2

Probab=96.52  E-value=0.19  Score=46.89  Aligned_cols=183  Identities=16%  Similarity=0.229  Sum_probs=126.6

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheeecc--cch---------------hhhhhhchhhhhhhccCCCCCCccchhh
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIG--YKH---------------IEAGTKLSEDCCRYGAENNQNINENILP  109 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis~g--sKq---------------~Ei~~KLaeDc~KYG~en~~~~~~~~La  109 (323)
                      .++|++.--+|+.+   =.+|++.+|-|+---  ++-               .--..-|++..-+||.+=.   .++.+.
T Consensus        19 f~~l~~~~D~tk~~---~~~i~~~t~~~LqPNp~~R~~~~~~~k~~~k~~~~~~~~~~Lg~~M~~~g~~~g---~~s~~G   92 (220)
T cd07617          19 FENLLARADSTKNW---TEKILRQTEVLLQPNPSARVEEFLYEKLDRKVPSRVTNAELLGQYMTEAANDFG---PGTPYG   92 (220)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHhCCChhhhHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHhcC---CCCchH
Confidence            56777777777654   457777777765322  111               1113347888889999854   455799


Q ss_pred             HHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhh
Q 020634          110 KAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPEN  189 (323)
Q Consensus       110 rAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~  189 (323)
                      .|-..||.|...|=.-+..+.-...+-+.+||+....+-        -.-|..-|.-+|..-.+.-..++|.+   ++| 
T Consensus        93 ~aL~~~g~a~~~ia~~~~~~~~~v~~~fl~pL~~~l~~d--------lk~i~k~RKkLe~rRLd~D~~K~r~~---kae-  160 (220)
T cd07617          93 KTLIKVGETQKRLGAAERDFIHTSSINFLTPLRNFLEGD--------WKTISKERRLLQNRRLDLDACKARLK---KAE-  160 (220)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHh---ccH-
Confidence            999999999999999999999999999999999776542        12455667777766666555555554   234 


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHH-HHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 020634          190 VAKLHAAEARMQELKANMAILGKEAAAALAAIE-AQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAE  257 (323)
Q Consensus       190 ~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVE-aQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~E  257 (323)
                       ..|+.|+.|..+-+. .+.      ..|--|- .--  =.+.=|-+.|+|...||....+||..|..+
T Consensus       161 -~elr~A~~kf~~~~E-~a~------~~M~~il~~~~--e~l~~L~~lv~AQl~Yh~q~~e~L~~l~~~  219 (220)
T cd07617         161 -HELRVAQTEFDRQAE-VTR------LLLEGISSTHV--NHLRCLHEFVEAQATYYAQCYRHMLDLQKQ  219 (220)
T ss_pred             -HHHHHHHHHHHHHHH-HHH------HHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             378889999887544 322      2232221 100  124568899999999999999999999765

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Vertebrates contain two endophilin-B isoforms. Endophilin-B proteins are cytoplasmic proteins expressed mainly in the heart, placenta, and skeletal muscle. Endophilin-B2, also called SH3GLB2 (SH3-domain GRB2-like endophilin B2), is a cytoplasmic protein that interacts with the apoptosis inducer Bax. It is overexpressed in prostate cancer metastasis and has been identified

>cd07638 BAR_ACAP2 The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 2

Probab=96.46  E-value=0.47  Score=43.42  Aligned_cols=182  Identities=10%  Similarity=0.237  Sum_probs=133.8

Q ss_pred             HHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHH
Q 020634           48 QQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQE  127 (323)
Q Consensus        48 q~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre  127 (323)
                      ..|+||+..-+.--+.+++-+.+...|+. |-+          |-.+||++..      ..+-+-..|+.+-..|+..|+
T Consensus        16 ~~l~Kl~K~~~~~~dag~~~~~a~~~F~~-~l~----------d~~~~~~~De------~i~~~l~kF~~~l~ei~~~~~   78 (200)
T cd07638          16 LKLDKLVKLCIGMIDAGKAFCQANKQFMN-GIR----------DLAQYSSKDA------VIETSLTKFSDTLQEMINYHT   78 (200)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHH----------HHHHhCCcch------hhHHHHHHHHHHHHHHHHHHH
Confidence            57888888888777777777776666642 222          3355776665      233444559999999999999


Q ss_pred             HHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHH
Q 020634          128 DFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANM  207 (323)
Q Consensus       128 ~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~M  207 (323)
                      .|+.-...-+..||..-+.. .|-+++-...+||+..++-++-..--++=- |.|       ..-++.|+.-|.--+++-
T Consensus        79 ~L~~q~~~~l~~~L~~F~k~-dl~~vke~kk~FdK~s~~~~~aL~K~~~~~-k~k-------~~e~eEa~~~l~~~r~~F  149 (200)
T cd07638          79 ILFDQAQRSIKAQLQTFVKE-DLRKFKDAKKQFDKVSEEKENALVKNAQVQ-RNK-------QHEVEEATNILTATRKCF  149 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhHHHHHHHHHhccCC-cCc-------hHHHHHHHHHHHHHHHHH
Confidence            99999999999999887764 567899999999999976665432211110 111       123466666777777776


Q ss_pred             HHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          208 AILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       208 a~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      --..=+=..++..|++-.-=-=|+.|++.+.|=-+|...--++|++++
T Consensus       150 ~~~~ldYv~~ln~vq~kKkfe~le~ll~~m~a~~tff~qG~el~~d~~  197 (200)
T cd07638         150 RHIALDYVLQINVLQSKRRSEILKSMLSFMYAHLTFFHQGYDLFSELG  197 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            666667778888888888777889999999999999999999998875

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. ACAP2 (ArfGAP with Coiled-coil, ANK repeat and PH domain containing protein 2), also called centaurin beta-2, is an Arf6-specific GTPase activating protein (GAP) which mediates Arf6 signaling. Arf6 is involved in the regulation of endocytosis, phagocytosis, cell adhesion and migration. ACAP2 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, and C-terminal ankyrin (ANK) repeats. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07618 BAR_Rich1 The Bin/Amphiphysin/Rvs (BAR) domain of RhoGAP interacting with CIP4 homologs protein 1

Probab=96.37  E-value=0.37  Score=45.42  Aligned_cols=194  Identities=18%  Similarity=0.248  Sum_probs=126.7

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheeecccchh--h------hhhhchhhhhhhccCCCCCCccchhhHHHHHhhHh
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHI--E------AGTKLSEDCCRYGAENNQNINENILPKAAAIYGDA  118 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~--E------i~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a  118 (323)
                      -++||+---+||.+   =-+|++..+.+. -|..-.  |      -..-|++.--+||.+=+   .++.+.+|-..||.+
T Consensus        17 ~~~le~r~D~~k~~---~~~i~k~~~~~l-qpnp~~r~ek~~kk~p~~~Lgq~M~e~~~~lg---~~s~~g~aL~~~gea   89 (246)
T cd07618          17 LLQIERRLDTVRSV---SHNVHKRLIACF-QGQVGTDAEKRHKKLPLTALAQNMQEGSAQLG---EESLIGKMLDTCGDA   89 (246)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHc-CCChHHHHHHHhccCCHHHHHHHHHHHHhcCC---CCccHHHHHHHHHHH
Confidence            46777777776544   447777777664 221111  1      13446777778888854   456799999999999


Q ss_pred             hHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhcc--CC-C-hhhhhh--
Q 020634          119 RKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVRE--AP-N-PENVAK--  192 (323)
Q Consensus       119 ~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~re--s~-n-~e~~~K--  192 (323)
                      -+.+=.+|-++--.+-..|.+||+....+- |-++-+....-...|-+.+     ..|++.+.-.  ++ | ..+..|  
T Consensus        90 ~~kla~~~~~~d~~ie~~fl~PL~~~le~d-lk~I~K~RkkLe~~RLD~D-----~~K~r~~~a~~~~~~~~~~~~~K~~  163 (246)
T cd07618          90 ENKLAFELSQHEVLLEKDILDPLNQLAEVE-IPNIQKQRKQLAKLVLDWD-----SARGRYNQAHKSSGTNFQAMPSKID  163 (246)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHhHHhhHH-----HHHHHHHhccccCccccccccchhh
Confidence            999999988888888889999999887743 2233333333334444432     3344333111  11 1 122344  


Q ss_pred             -----hHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Q 020634          193 -----LHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSE  261 (323)
Q Consensus       193 -----Lq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EMvsE  261 (323)
                           +..|+.|+.+-|...+.   ++-.-| +=|..+    +.=|+..|+|=..||...++||+.+..+|-.-
T Consensus       164 ~l~ee~e~a~~k~E~~kD~~~~---dm~~~l-~~e~e~----~~~l~~lv~aQ~eYHr~a~e~Le~~~p~i~~~  229 (246)
T cd07618         164 MLKEEMDEAGNKVEQCKDQLAA---DMYNFA-SKEGEY----AKFFVLLLEAQADYHRKALAVIEKVLPEIQAH  229 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH---HHHHHH-HcCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 57888888888877666   444433 223333    34588999999999999999999999998653

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. RhoGAP interacting with CIP4 homologs protein 1 (Rich1) is also called Neuron-associated developmentally-regulated protein (Nadrin) or Rho GTPase activating protein 17 (ARHGAP17). It is a Cdc42- and Rac-specific GAP that binds to polarity proteins through the scaffold protein angiomotin and plays a role in maintaining the integrity of tight junctions. It may be a component of a sorting mechanism in the recycling of tight junction transmembrane proteins. Rich1 contains an N-terminal BAR domain followed by a Rho GAP domain and a C-terminal proline-rich domain. It interacts with the BAR domain proteins endophilin and amphiphysin through its proline-rich region. The BAR domain of Rich1 forms oligomers and can bind membranes and induce membrane tubulation.

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=96.31  E-value=0.0043  Score=44.16  Aligned_cols=35  Identities=26%  Similarity=0.253  Sum_probs=29.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEE-EecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVR-KVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVR-qVs~~GWs  319 (323)
                      ++.|+.+|.++...||||..||.|.|- .-.+.||-
T Consensus         1 ~~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww   36 (55)
T PF07653_consen    1 YYRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWW   36 (55)
T ss_dssp             EEEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEE
T ss_pred             CEEEeEEECCCCCCceEEecCCEEEEEEeecCCCEE
Confidence            367999999999999999999999996 77888883

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>cd07615 BAR_Endophilin_A3 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A3

Probab=96.27  E-value=0.36  Score=44.95  Aligned_cols=147  Identities=18%  Similarity=0.338  Sum_probs=103.0

Q ss_pred             hchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHH
Q 020634           87 KLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQE  166 (323)
Q Consensus        87 KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQE  166 (323)
                      -|++.--+||.+=.   .++.+..|-..||.|...+=..+..+.-.+.+-+.+||+....+-        -.-|..-|.-
T Consensus        68 ~Lg~~M~~~G~~lg---~dS~~G~aL~~~G~A~~kla~~~~~~~~~v~~~fl~pL~~~l~~d--------ik~i~k~RKk  136 (223)
T cd07615          68 LLGDCMLRYGRELG---EESTFGNALLDVGESMKQMAEVKDSLDINVKQNFIDPLQLLQDKD--------LKEIGHHLKK  136 (223)
T ss_pred             HHHHHHHHHHhhCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH
Confidence            57777788888854   455799999999999999999999999999999999999654332        1134445555


Q ss_pred             HHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH---HHHhHHHHHHHHHHHHHhhhhH
Q 020634          167 AETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAI---EAQQHRLTFQRLVAMVEGEKNY  243 (323)
Q Consensus       167 aE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aV---EaQQQrlTlQRLiaMVeaEr~Y  243 (323)
                      .|..-.+.--.+.|  .+..+  -.-++.|+.|..|-+.-       |...|-.+   |.-|    +.=|.+.|+|+-.|
T Consensus       137 Le~rRLd~D~~K~r--~~k~~--~eE~~~A~~kfees~E~-------a~~~M~n~le~e~e~----~~~L~~lv~AQl~Y  201 (223)
T cd07615         137 LEGRRLDFDYKKKR--QGKIP--DEEIRQAVEKFEESKEL-------AERSMFNFLENDVEQ----VSQLSVLIEAALDY  201 (223)
T ss_pred             HHHHHHHHHHHHHc--CCCCc--HHHHHHHHHHHHHHHHH-------HHHHHHHHHHcChHH----HHHHHHHHHHHHHH
Confidence            55444443333223  22222  34577888888876543       33334332   1222    34578999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 020634          244 HLRIAAILGDVEAEMV  259 (323)
Q Consensus       244 Hqrv~~ILd~l~~EMv  259 (323)
                      |+..++||..|..++.
T Consensus       202 h~~a~eiL~~l~~~l~  217 (223)
T cd07615         202 HRQSTEILEDLQSKLQ  217 (223)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999886

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins are accessory proteins localized at synapses that interacts with the endocytic proteins, dynamin and synaptojanin. They are essential for synaptic vesicle formation from the plasma membrane. They interact with voltage-gated calcium channels, thus linking vesicle endocytosis to calcium regulation. They also play roles in virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated e

>cd07636 BAR_GRAF The Bin/Amphiphysin/Rvs (BAR) domain of GTPase Regulator Associated with Focal adhesion kinase

Probab=96.18  E-value=0.4  Score=44.33  Aligned_cols=186  Identities=12%  Similarity=0.208  Sum_probs=141.0

Q ss_pred             hhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccC---CCCCCccc-hhhHHHHHhhHhhHHHHHHHHHHHHHhhhh
Q 020634           61 KDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAE---NNQNINEN-ILPKAAAIYGDARKHVEKEQEDFNRLLSSQ  136 (323)
Q Consensus        61 KhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~e---n~~~~~~~-~LarAa~~yg~a~~~mEkEre~l~r~L~~Q  136 (323)
                      .+|=++|++..=++|..|..=.---.+++..-+-|+-+   ++ .+++. .++.+-..|+.+-..||++|+.|+.--...
T Consensus        15 ~k~ik~liK~~k~~i~A~k~~~~a~~~Fa~sL~~f~~~~~gd~-~~dDe~~I~~~L~kF~~~L~ei~~~r~~L~~qa~~~   93 (207)
T cd07636          15 NKFIKELIKDGKSLIAALKNLSSAKRKFADSLNEFKFQCIGDA-ETDDEICIARSLQEFAAVLRNLEDERTRMIENASEV   93 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778888888888887765555566777777777733   11 12222 377888899999999999999999999999


Q ss_pred             hhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHH
Q 020634          137 VLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAA  216 (323)
Q Consensus       137 V~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~a  216 (323)
                      +..||-.-+. -+|-.++--..+|||..+.-++-..-.+-=..|     +.+  ..++.|+.-|.--+++---..=+=+-
T Consensus        94 l~~~L~~F~k-edi~~~Ke~kK~FdK~se~~~~al~k~~~ls~k-----~K~--~~~eEA~~~L~~~r~~F~~~sLdYV~  165 (207)
T cd07636          94 LITPLEKFRK-EQIGAAKEAKKKYDKETEKYCAVLEKHLNLSSK-----KKE--SQLHEADSQVDLVRQHFYEVSLEYVF  165 (207)
T ss_pred             HHHHHHHHHH-HHHHHHHHHhhhHhhhhhHHHHHHHHHhcCccc-----CCc--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999988765 466789999999999999988654332211011     112  26889999998888888777777777


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          217 ALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       217 AM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                      .+..|++-.-===++.|++.+.|=.+|...--+++.++.
T Consensus       166 qi~~vq~rKkfefle~llsfm~a~~tffhqG~el~~d~~  204 (207)
T cd07636         166 KVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFS  204 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence            888888877777788999999999999988888887764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. GTPase Regulator Associated with Focal adhesion kinase (GRAF), also called Rho GTPase activating protein 26 (ARHGAP26), is a GAP with activity towards RhoA and Cdc42 and is only weakly active towards Rac1. It influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase (FAK), which is a critical component of integrin signaling. GRAF contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions. The BAR domain of GRAF directly interacts with its Rho GAP domain and inhibits its activity. Autoinhibited GRAF is capable o

>cd07590 BAR_Bin3 The Bin/Amphiphysin/Rvs (BAR) domain of Bridging integrator 3

Probab=95.63  E-value=1.9  Score=40.08  Aligned_cols=197  Identities=20%  Similarity=0.285  Sum_probs=127.7

Q ss_pred             CCCcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHH
Q 020634           33 RSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAA  112 (323)
Q Consensus        33 ~~d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa  112 (323)
                      ..|..+-|+  -++.+.||+      ++|..|||.-+=.+.+-....-+.-|...|++ |  |+.++    + ..+-.++
T Consensus         8 T~D~~fe~~--~~rf~~lE~------~~~kL~Ke~K~Y~dav~~m~~a~~~is~~l~~-~--~~~~~----~-~~~~~~~   71 (225)
T cd07590           8 TVDRELERE--VQKLQQLES------TTKKLYKDMKKYIEAVLALSKAEQRLSQDLAS-G--PLCED----N-DELRNLV   71 (225)
T ss_pred             CCChHHHHH--HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-c--ccCCC----C-hHHHHHH
Confidence            345555332  244555553      45677777666666665555666677777776 3  55443    1 2366799


Q ss_pred             HHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchh-----hHHHHHHHHHHHHHHhHHHHHHHHhhhccCCCh
Q 020634          113 AIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDAR-----HLAQRYSRMRQEAETQAVEVSKRQQRVREAPNP  187 (323)
Q Consensus       113 ~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDAR-----hLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~  187 (323)
                      -.|...-..|+.=-..++..+.+.|.+||.....=-|.-..+     |...=|||+|...+.-       +.|-+   ..
T Consensus        72 e~y~~~~~~l~~~~~~~~~~~~~~vl~Pl~~~~s~f~~I~~~I~KR~~Kl~DYD~~r~~~~kl-------~~K~~---k~  141 (225)
T cd07590          72 EALDSVTTQLDKTVQELVNLIQKTFIEPLKRLRSVFPSVNAAIKRREQSLQEYERLQAKVEKL-------AEKEK---TG  141 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-------HhCcc---CC
Confidence            999999999996668889999999999998887666654443     4556688888777632       22311   22


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH---HHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 020634          188 ENVAKLHAAEARMQELKANMAILGKEAAAALAAI---EAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEM  258 (323)
Q Consensus       188 e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aV---EaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EM  258 (323)
                      .+-.||..||..+..-+..-..+..+.-.=|-..   ...==.-+||-|+.|   +-.||.-.-.++.+|..-.
T Consensus       142 ~~~~KL~kae~el~~Ak~~ye~~N~~L~~ELP~l~~~r~~f~~p~Fqsl~~~---Ql~f~~e~~k~~~~l~~~~  212 (225)
T cd07590         142 PNLAKLEQAEKALAAARADFEKQNIKLLEELPKFYNGRTDYFQPCFEALIKS---QVLYYSQSTKIFTQLAPNL  212 (225)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhh
Confidence            2369999999999988877766665443322211   111112356666665   6689999999998887643

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Bridging integrator 3 (Bin3) is widely expressed in many tissues except in the brain. It plays roles in regulating filamentous actin localization and in cell division. In humans, the Bin3 gene is located in chromosome 8p21.3, a region that is implicated in cancer suppression. Homozygous inactivation of the Bin3 gene in mice led to the development of cataracts and an increased likelihood of lymphomas during aging, suggesting a role for Bin3 in lens development and cancer suppression. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07635 BAR_GRAF2 The Bin/Amphiphysin/Rvs (BAR) domain of GTPase Regulator Associated with Focal adhesion 2

Probab=95.61  E-value=1.2  Score=41.32  Aligned_cols=140  Identities=11%  Similarity=0.203  Sum_probs=104.7

Q ss_pred             hhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCCh
Q 020634          108 LPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNP  187 (323)
Q Consensus       108 LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~  187 (323)
                      ++..-..|+++...++.+|+.|+.-+..-+..||-.-+- -+|-.++-...+||+-..+-++-..-.++=.+|.|+.   
T Consensus        65 i~~sl~ef~~~~~el~d~r~~L~~~~~~~l~~pL~~F~k-edl~~~Ke~KK~FdK~se~~~~Al~K~~~ls~kkk~~---  140 (207)
T cd07635          65 IDASLQEFSNFLKNLEEQREIMALNVTETLIKPLERFRK-EQLGAVKEEKKKFDKETEKNYSLLEKHLNLSAKKKEP---  140 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccCCCCcc---
Confidence            467778999999999999999999999999999988754 4678899999999999999998766554443343321   


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 020634          188 ENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       188 e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                          -++.|+.-|.--++.---..=+=+.++..|.+-..===|+.|++.+.|=.+|...--+++.++.
T Consensus       141 ----e~~EA~~~l~~~r~~F~~~sLdYv~qin~lQ~rKKfe~le~ll~~m~a~~tffhqG~el~~d~~  204 (207)
T cd07635         141 ----QLQEADVQVEQNRQHFYELSLEYVCKLQEIQERKKFECVEPMLSFFQGVFTFYHQGYELAKDFN  204 (207)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence                2345555555555544444444556677777766666678899999999999888888887764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. GTPase Regulator Associated with Focal adhesion kinase 2 (GRAF2), also called Rho GTPase activating protein 10 (ARHGAP10) or PS-GAP, is a GAP with activity towards Cdc42 and RhoA which regulates caspase-activated p21-activated protein kinase-2 (PAK-2p34). GRAF2 interacts with PAK-2p34, leading to its stabilization and decrease of cell death. It is highly expressed in skeletal muscle and also interacts with PKNbeta, which is a target of Rho. GRAF2 contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions. The BAR domain of the related prote

>cd07614 BAR_Endophilin_A2 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A2

Probab=95.44  E-value=2  Score=40.03  Aligned_cols=184  Identities=18%  Similarity=0.307  Sum_probs=117.8

Q ss_pred             HHHHHHHHhhhhchhhhhHHHhhhhhheeec--cc-----------c-----hh----hhhhhchhhhhhhccCCCCCCc
Q 020634           47 HQQLEKLYRSTRGTKDFQRDLVKVAEVFTAI--GY-----------K-----HI----EAGTKLSEDCCRYGAENNQNIN  104 (323)
Q Consensus        47 hq~LekLY~STRaaKhFQrdIVRgvEGfis~--gs-----------K-----q~----Ei~~KLaeDc~KYG~en~~~~~  104 (323)
                      .++||+.--+|+.   +=-+|++..+-++--  |+           |     -.    --..-|++.--+||.+=.   .
T Consensus         9 f~~le~~~d~t~~---~~~~l~~~t~~~LqPNp~~R~~~~~~~~~~k~rg~~k~~~~p~~~~~Lg~~M~~~G~~lg---~   82 (223)
T cd07614           9 FKEMEKKVDLTSK---AVTEVLARTIEYLQPNPASRAKLTMLNTVSKIRGQVKNPGYPQSEGLLGETMIRYGKELG---D   82 (223)
T ss_pred             HHHHHHHHHHHHH---HHHHHHHHHHHHhCCCchHhHHHHHHHHHHHHhccccCCCCCChHhHHHHHHHHHHhhCC---C
Confidence            4567776666654   345677777666541  11           1     00    012347777788998854   4


Q ss_pred             cchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccC
Q 020634          105 ENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREA  184 (323)
Q Consensus       105 ~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res  184 (323)
                      ++.++.|-..||.|...+=..|..+--.+.+-+.+||+.-..+-        -..|..-|.-+|..-.+.--.+.  |.+
T Consensus        83 dS~~G~aL~~~G~a~~kia~~~~~~d~~i~~~fl~pL~~~le~d--------ik~i~k~RKkLe~rRLdyD~~K~--r~~  152 (223)
T cd07614          83 ESNFGDALLDAGESMKRLAEVKDSLDIEVKQNFIDPLQNLCDKD--------LKEIQHHLKKLEGRRLDFDYKKK--RQG  152 (223)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH--cCC
Confidence            55799999999999999999999999999999999999765331        12455556655555444333222  233


Q ss_pred             CChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH---HHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 020634          185 PNPENVAKLHAAEARMQELKANMAILGKEAAAALAAI---EAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMV  259 (323)
Q Consensus       185 ~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aV---EaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EMv  259 (323)
                      ..++  .-|+.|..|..+-+.       .|...|-.|   |+-|    +.=|.+.|+|.=.||+..++||..|..++.
T Consensus       153 k~~e--eelr~a~ekFees~E-------~a~~~M~~il~~e~e~----~~~L~~lveAQl~Yh~qa~eiL~~l~~~l~  217 (223)
T cd07614         153 KIPD--EELRQAMEKFEESKE-------VAETSMHNLLETDIEQ----VSQLSALVDAQLDYHRQAVQILDELAEKLK  217 (223)
T ss_pred             CCch--HHHHHHHHHHHHHHH-------HHHHHHHHHHhCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2332  234445555544332       222333222   1112    345789999999999999999999999886

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins are accessory proteins, localized at synapses, which interact with the endocytic proteins, dynamin and synaptojanin. They are essential for synaptic vesicle formation from the plasma membrane. They interact with voltage-gated calcium channels, thus linking vesicle endocytosis to calcium regulation. They also play roles in virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated

>cd07588 BAR_Amphiphysin The Bin/Amphiphysin/Rvs (BAR) domain of Amphiphysins

Probab=94.55  E-value=3.8  Score=37.71  Aligned_cols=174  Identities=22%  Similarity=0.260  Sum_probs=115.3

Q ss_pred             chhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhh
Q 020634           59 GTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVL  138 (323)
Q Consensus        59 aaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~  138 (323)
                      .+|.+|||+-.=.+.+-..-.-|+.|+.-|++=   |+...    +|      ...+......++.=-.++...|.++|.
T Consensus        27 ~~~kL~k~~K~Y~~av~~m~~~q~~~~e~l~~l---Y~p~~----~~------~~~~~~v~e~~d~~~~~l~~~l~~~Vl   93 (211)
T cd07588          27 SANRLQKDLKNYLNSVRAMKQASKTLSETLKEL---YEPDW----PG------REHLASIFEQLDLLWNDLEEKLSDQVL   93 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCcc----cc------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999888888877777788888888543   33332    22      123344556666666678888999999


Q ss_pred             hHHHHhhcCCCccchh-----hHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHH
Q 020634          139 DPLRAMITGAPLEDAR-----HLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKE  213 (323)
Q Consensus       139 ePLRaMv~GaPLEDAR-----hLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKE  213 (323)
                      +||.....=-|--..|     |=..=|||+|...+.-           .+.+. .+..||..||.+|+..+..-..|..+
T Consensus        94 ~Pl~~~~s~f~~i~k~I~KR~~KllDYDr~r~~~~kL-----------~~K~~-kde~KL~kae~el~~Ak~~Ye~lN~~  161 (211)
T cd07588          94 GPLTAYQSQFPEVKKRIAKRGRKLVDYDSARHNLEAL-----------KAKKK-VDDQKLTKAEEELQQAKKVYEELNTE  161 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHHH-----------Hhccc-ccHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999887555543332     2223499999888754           22222 34689999999999888877776655


Q ss_pred             HHHHHHHHHHHhHHHHH--HHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 020634          214 AAAALAAIEAQQHRLTF--QRLVAMVEGEKNYHLRIAAILGDVEAEMV  259 (323)
Q Consensus       214 A~aAM~aVEaQQQrlTl--QRLiaMVeaEr~YHqrv~~ILd~l~~EMv  259 (323)
                      =--=|-..=+  -|+.|  -=+-+++-++-.||.-+..+..+|.+-|.
T Consensus       162 L~~ELP~L~~--~ri~f~~p~F~sl~~~q~~F~~e~~~~~~~l~~~~~  207 (211)
T cd07588         162 LHEELPALYD--SRIAFYVDTLQSIFAAESVFHKEIGKVNTKLNDVMD  207 (211)
T ss_pred             HHHHhHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4333322211  12211  12345667799999999999999988774

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Amphiphysins function primarily in endocytosis and other membrane remodeling events. They contain an N-terminal BAR domain with an additional N-terminal amphipathic helix (an N-BAR), a variable central domain, and a C-terminal SH3 domain. This subfamily is composed of different isoforms of amphiphysin and Bridging integrator 2 (Bin2). Amphiphysin I proteins, enriched in the brain and nervous system, contain domains that bind clathrin, Adaptor Protein complex 2 (AP2), dynamin and synaptojanin. They function in synaptic vesicle endocytosis. Some amphiphysin II isoforms, also called Bridging integrator 1 (Bin1), are localized in many different tissues and may function in intracellular vesicle trafficking. In skeletal muscle, Bin1 plays a role in the organization and maintenance of th

>cd07598 BAR_FAM92 The Bin/Amphiphysin/Rvs (BAR) domain of Family with sequence similarity 92 (FAM92)

Probab=94.42  E-value=4  Score=37.44  Aligned_cols=171  Identities=15%  Similarity=0.190  Sum_probs=105.0

Q ss_pred             HhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhc
Q 020634           67 LVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMIT  146 (323)
Q Consensus        67 IVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~  146 (323)
                      +++.+++++.-..+=-.-+.-|+.-|.-||+.-    + ..|++|-..|+..-..|+-=|..-...+-.-|.+||+..++
T Consensus        23 l~~~~~~lv~k~~~L~~~~~~fak~~~~la~~E----~-~~L~~~L~~lae~~~~i~d~~q~qv~~l~~~v~epLk~Y~~   97 (211)
T cd07598          23 LCQDFAAYTRKTARLRDKGDELAKSINAYADTE----N-PSLKQGLKNFAECLAALQDYRQAEVERLEAKVVQPLALYGT   97 (211)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcc----C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444445554322222223344677788888652    2 35999999999999999988888888888899999987543


Q ss_pred             C-CCccchhhHH-HHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Q 020634          147 G-APLEDARHLA-QRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQ  224 (323)
Q Consensus       147 G-aPLEDARhLa-qRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQ  224 (323)
                      = ...-|++..+ ..|+++.+        -.+.-.|.|.. ||.+-.++..||++|+.-+.-..-.       -..++.+
T Consensus        98 l~k~~k~~~K~~~~ar~~~~~--------~~~~leklk~~-~~~d~~~i~eaE~~l~~a~~d~~r~-------s~~l~ee  161 (211)
T cd07598          98 ICKHARDDLKNTFTARNKELK--------QLKQLEKLRQK-NPSDRQIISQAESELQKASVDANRS-------TKELEEQ  161 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhc-CCchhhHHHHHHHHHHHHHHHHHHH-------HHHHHHH
Confidence            2 2233333211 12222222        11223344433 4444557778999998877633333       3334443


Q ss_pred             hHHHHHHH------H-HHHHHhhhhHHHHHHHHHHHHHHHH
Q 020634          225 QHRLTFQR------L-VAMVEGEKNYHLRIAAILGDVEAEM  258 (323)
Q Consensus       225 QQrlTlQR------L-iaMVeaEr~YHqrv~~ILd~l~~EM  258 (323)
                      =.|.--+|      + ...|+.|=.||..+++++..+...+
T Consensus       162 ~~rFe~~k~~d~K~~l~~fv~~~m~~~~kale~~~~~~~~~  202 (211)
T cd07598         162 MDNFEKQKIRDIKTIFSDFVLIEMLFHAKALEVYTAAYQDI  202 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333333      3 4789999999999999998887654

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. This group is composed of proteins from the family with sequence similarity 92 (FAM92), which were originally identified by the presence of the unknown domain DUF1208. This domain shows similarity to the BAR domains of sorting nexins. Mammals contain at least two member types, FAM92A and FAM92B, which may exist in many variants. The Xenopus homolog of FAM92A1, xVAP019, is essential for embryo survival and cell differentiation. FAM92A1 may be involved in regulating cell proliferation and apoptosis. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07596 BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins

Probab=94.15  E-value=3.1  Score=35.11  Aligned_cols=163  Identities=13%  Similarity=0.169  Sum_probs=111.3

Q ss_pred             chhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHH
Q 020634           88 LSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA  167 (323)
Q Consensus        88 LaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEa  167 (323)
                      |+.-|..++....  ..+..|+.+-..+|.+...+=.-...+....-..+.+||+-++.-.+  -+|.+-.+.+++.++.
T Consensus        44 lg~~~~~Ls~~e~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~L~~y~~~~~--s~k~~l~~R~~~~~~~  119 (218)
T cd07596          44 FGKALIKLAKCEE--EVGGELGEALSKLGKAAEELSSLSEAQANQELVKLLEPLKEYLRYCQ--AVKETLDDRADALLTL  119 (218)
T ss_pred             HHHHHHHHHhhcc--ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence            3344444554432  11125899999999999999888999999999999999999884322  2555556655666666


Q ss_pred             HHhHHHHHHHHh---hhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHH-------HHHHH
Q 020634          168 ETQAVEVSKRQQ---RVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQR-------LVAMV  237 (323)
Q Consensus       168 E~qa~eV~rRq~---k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQR-------LiaMV  237 (323)
                      +.--..+.+.+.   |.+.+++ -+..|...++.++.++...+..+-+..-..-..+..+=.|..-.|       |..++
T Consensus       120 ~~~~~~l~~k~~~~~kl~~~~~-~~~~ki~~l~~~i~~~e~~~~~~~~~~~~i~~~~~~El~~f~~~~~~dlk~~l~~~~  198 (218)
T cd07596         120 QSLKKDLASKKAQLEKLKAAPG-IKPAKVEELEEELEEAESALEEARKRYEEISERLKEELKRFHEERARDLKAALKEFA  198 (218)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555555555443   3333332 123577778888888887777777776666666666666665555       66788


Q ss_pred             HhhhhHHHHHHHHHHHHH
Q 020634          238 EGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       238 eaEr~YHqrv~~ILd~l~  255 (323)
                      +....||+.+++++..+-
T Consensus       199 ~~qi~~~~~~~~~W~~~~  216 (218)
T cd07596         199 RLQVQYAEKIAEAWESLL  216 (218)
T ss_pred             HHHHHHHHHHHHHHHhhC
Confidence            899999999999887763

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07601 BAR_APPL The Bin/Amphiphysin/Rvs (BAR) domain of Adaptor protein, Phosphotyrosine interaction, PH domain and Leucine zipper containing proteins

Probab=93.61  E-value=6.1  Score=36.70  Aligned_cols=146  Identities=10%  Similarity=0.192  Sum_probs=106.7

Q ss_pred             ccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhcc
Q 020634          104 NENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVRE  183 (323)
Q Consensus       104 ~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~re  183 (323)
                      .+.++.-+-..|+.+-..|+..|+.|..-+..-+..||-.-+.+ .|-+++-+..+||+-..+-++-..-.++=..| | 
T Consensus        59 dDe~~~~~l~kFs~~l~El~~~~~~L~~q~~~~l~~pL~~F~k~-Dl~~vKe~kK~FdK~s~~~d~al~K~~~l~k~-k-  135 (215)
T cd07601          59 DDEILVSTLKQFSKVVDELSTMHSTLSSQLADTVLHPISQFMES-DLAEIMTLKELFKAASNDHDGVLSKYSRLSKK-R-  135 (215)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhHHHHHHHHHHhhCCcC-C-
Confidence            34445557778999999999999999999999999999988876 56789999999999999999855444331111 1 


Q ss_pred             CCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHH-HHHH
Q 020634          184 APNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILG-DVEA  256 (323)
Q Consensus       184 s~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd-~l~~  256 (323)
                       +++..   .+.|+.-|.--++.---.-=+=..++..|++-..===|+.|++.+.|=.+|.+.--++|. +++.
T Consensus       136 -~~~~~---~~Ea~~~l~~~R~~F~~~~ldYv~~ln~iq~kKk~e~Le~ll~~m~A~~tff~qG~ell~~~~~p  205 (215)
T cd07601         136 -ENTKV---KIEVNDEVYACRKKQHQTAMNYYCALNLLQYKKTTALLEPMIGYLQAQIAFFKMGPEMFTRQTEE  205 (215)
T ss_pred             -CchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             12111   235555555555555444445566777777777667788999999999999999999887 6654

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Adaptor protein, Phosphotyrosine interaction, PH domain and Leucine zipper containing (APPL) proteins are effectors of the small GTPase Rab5 that function in endosome-mediated signaling. They contain BAR, pleckstrin homology (PH) and phosphotyrosine binding (PTB) domains. They form homo- and hetero-oligomers that are mediated by their BAR domains, and are localized to cytoplasmic membranes. Vertebrates contain two APPL proteins, APPL1 and APPL2. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=92.05  E-value=0.13  Score=55.78  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=32.3

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -+++.+|.+++-.|||+.+||.|-+-+-.|+||+-
T Consensus      1054 ~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~ 1088 (1106)
T KOG0162|consen 1054 CEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWL 1088 (1106)
T ss_pred             eeeeccCCCCCcccccccCCCEEEEeccCCCcchh
Confidence            36789999999999999999999999999999973

>cd07620 BAR_SH3BP1 The Bin/Amphiphysin/Rvs (BAR) domain of SH3-domain Binding Protein 1

Probab=91.76  E-value=13  Score=35.88  Aligned_cols=159  Identities=15%  Similarity=0.208  Sum_probs=100.5

Q ss_pred             chhhhhhhccCCCCCCccchhhHHHHHhhHhh-HHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHH
Q 020634           88 LSEDCCRYGAENNQNINENILPKAAAIYGDAR-KHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQE  166 (323)
Q Consensus        88 LaeDc~KYG~en~~~~~~~~LarAa~~yg~a~-~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQE  166 (323)
                      |++---+||.+=+   .++.|.+|- ..|-+. ++|=.+..++---+-..|.+||--... --|-+.-|...+-.++|.+
T Consensus        62 Ls~~M~es~keLg---~dS~lg~aL-e~~~~~e~~LA~~l~~~E~~Ve~~vl~PL~~L~e-~dL~~I~k~rKkL~k~~LD  136 (257)
T cd07620          62 LSISMAESFKDFD---AESSIRRVL-EMCCFMQNMLANILADFEMKVEKDVLQPLNKLSE-EDLPEILKNKKQFAKLTTD  136 (257)
T ss_pred             HHHHHHHHHhhCC---CcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-hhHHHHHHHHHHHHhHHhh
Confidence            4444467887754   334566666 777776 999999999999999999999988766 2233445555566667766


Q ss_pred             HHHhHHHHHHHHh-h-hccCCCh-------------hhhhh-------hHHHHHHHHHHHHHHHHhcHHHHHHHH---HH
Q 020634          167 AETQAVEVSKRQQ-R-VREAPNP-------------ENVAK-------LHAAEARMQELKANMAILGKEAAAALA---AI  221 (323)
Q Consensus       167 aE~qa~eV~rRq~-k-~res~n~-------------e~~~K-------Lq~AE~Kl~ELks~Ma~LGKEA~aAM~---aV  221 (323)
                      ...-     |+|. + .+.++.+             .+..|       ++.|+.|+.+-|..       +++.|-   +=
T Consensus       137 ~D~~-----K~R~~~a~k~s~~~~~~~~~~~~~~~~~~~~K~~~lkeE~eea~~K~E~~kd~-------~~a~Mynfl~k  204 (257)
T cd07620         137 WNSA-----KSRSPQAAGRSPRSGGRSEEVGEHQGIRRANKGEPLKEEEEECWRKLEQCKDQ-------YSADLYHFATK  204 (257)
T ss_pred             HHHH-----HHHHHHhhccccCCccccccccccccccccccccccHHHHHHHHHHHHHHHHH-------HHHHHHHHHHh
Confidence            6543     2222 1 1222211             23466       45566666555432       233332   22


Q ss_pred             HHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 020634          222 EAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEKQRKES  267 (323)
Q Consensus       222 EaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EMvsE~q~~Es  267 (323)
                      |..|-    .=|+..||+=..||.+.++||+.+..+|-.---..++
T Consensus       205 E~e~a----~~l~~lveaQ~~YHrqsl~~Le~~l~~~~~~~~~~~~  246 (257)
T cd07620         205 EDSYA----NYFIRLLELQAEYHKNSLEFLDKNITELKENHSQKEP  246 (257)
T ss_pred             hHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence            22222    2378889999999999999999999999765544443

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. SH3-domain binding protein 1 (SH3BP1 or 3BP-1) is a Rac GTPase activating protein that inhibits Rac-mediated platelet-derived growth factor (PDGF)-induced membrane ruffling. SH3BP1 contains an N-terminal BAR domain followed by a GAP domain for Rho and Rac GTPases and a C-terminal proline-rich domain. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>cd07676 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17

Probab=90.65  E-value=15  Score=34.43  Aligned_cols=118  Identities=14%  Similarity=0.161  Sum_probs=68.2

Q ss_pred             HHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCC-CC--CccchhhHHHHHhhHhhHHHHHHH
Q 020634           50 LEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENN-QN--INENILPKAAAIYGDARKHVEKEQ  126 (323)
Q Consensus        50 LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~-~~--~~~~~LarAa~~yg~a~~~mEkEr  126 (323)
                      .+.|..-|.-|-.|=.||..=+===   ..=--|.+.+|..-|.||..--. .+  .+..++-.|...+=+.-..+=.++
T Consensus         7 ~~~l~k~~~~Gi~~~~~i~~f~kER---a~IEkeYakkL~~L~kKy~~kk~~~~~~~~~~t~~~aw~~~l~e~~~~A~~H   83 (253)
T cd07676           7 FDNLEKHTQWGIEVLEKYIKFVKER---TEIELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCRAFLMTLNEMNDYAGQH   83 (253)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence            3445555555555555554321100   00123567899999999965421 00  111245455554433333444899


Q ss_pred             HHHHHHhhhhhhhHHHHhhcC----------------CCccch----hhHHHHHHHHHHHHHHh
Q 020634          127 EDFNRLLSSQVLDPLRAMITG----------------APLEDA----RHLAQRYSRMRQEAETQ  170 (323)
Q Consensus       127 e~l~r~L~~QV~ePLRaMv~G----------------aPLEDA----RhLaqRYdRmRQEaE~q  170 (323)
                      +.+-.-|.++|++||..++.-                .|++..    .--...|++..+|+|.-
T Consensus        84 ~~~~~~L~~~v~~~l~~~~~~~k~~rK~~~~~~~k~qk~~~~~~~~lekaKk~Y~~acke~E~A  147 (253)
T cd07676          84 EVISENLASQIIVELTRYVQELKQERKSHFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRA  147 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999877761                122211    11356788888888865

F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Formin Binding Protein 17 (FBP17), also called FormiN Binding Protein 1 (FNBP1), is involved in dynamin-mediated endocytosis. It is recruited to clathrin-coated pits late in the endocytosis process and may play a role in the invagination and scission steps. FBP17 binds in vivo to tankyrase, a protein involved in telomere maintenance and mitogen activated protein kinase (MAPK) signaling. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.

>KOG4225 consensus Sorbin and SH3 domain-containing protein [Signal transduction mechanisms]

Probab=90.23  E-value=0.17  Score=51.90  Aligned_cols=40  Identities=25%  Similarity=0.291  Sum_probs=34.8

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhhhc
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLRQM  322 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse~~  322 (323)
                      .-.|.|++.|.+++-+||+|..||+|+|++--.--|.|-|
T Consensus       230 ~~~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGE  269 (489)
T KOG4225|consen  230 KRAARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGE  269 (489)
T ss_pred             cchhhheeccccCCccccccCCCCEEEEEeeccCceeeee
Confidence            3459999999999999999999999999877777788754

>PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking

Probab=89.12  E-value=15  Score=32.14  Aligned_cols=148  Identities=14%  Similarity=0.188  Sum_probs=94.6

Q ss_pred             chhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCC
Q 020634          106 NILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAP  185 (323)
Q Consensus       106 ~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~  185 (323)
                      ..|+++-..||.+...+-.=.+.+....-....+||+-.+.-..  -++.+-.+=+++..+-+.-..++.+++.....-.
T Consensus        78 ~~l~~~l~~l~~~~~~~~~~~~~~a~~~~~~l~~~L~ey~~~~~--svk~~l~~R~~~~~~~~~a~~~l~kkk~~~~kl~  155 (236)
T PF09325_consen   78 KSLSEALSQLAEAFEKISELLEEQANQEEETLGEPLREYLRYIE--SVKEALNRRDKKLIEYQNAEKELQKKKAQLEKLK  155 (236)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            45899999999888877666666666666667788886654322  2344333444555666777777777776654333


Q ss_pred             -C-hhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHH-------HHHHHHhhhhHHHHHHHHHHHHH
Q 020634          186 -N-PENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQR-------LVAMVEGEKNYHLRIAAILGDVE  255 (323)
Q Consensus       186 -n-~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQR-------LiaMVeaEr~YHqrv~~ILd~l~  255 (323)
                       + ....-|+..++..+.+++..+..+-++--..-..+-.-=.|.--.|       |..+++..-.||+.++++...+.
T Consensus       156 ~~~~~~~~k~~~~~~ei~~~~~~~~~~~~~~~~is~~~k~E~~rf~~~k~~d~k~~l~~~~~~~i~~~~~~~~~We~~~  234 (236)
T PF09325_consen  156 ASGKNRQDKVEQAENEIEEAERRVEQAKDEFEEISENIKKELERFEKEKVKDFKSMLEEYAESQIEYQKKMLEAWETFL  234 (236)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHc
Confidence             2 2335788888888888888887766665444443333223333222       56677888888888888776653

This is the C-terminal dimerisation domain [].

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.49  E-value=0.57  Score=51.37  Aligned_cols=37  Identities=24%  Similarity=0.411  Sum_probs=27.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      =+|.||-||.|.+.--|||.+|..|.+|+-+++||-|
T Consensus       980 eiAqVia~yvAs~peQLsla~GqlIlIrkKn~sGWWe 1016 (1118)
T KOG1029|consen  980 EIAQVIADYVASGPEQLSLAPGQLILIRKKNASGWWE 1016 (1118)
T ss_pred             hhhhhhhhhhccCchhccccCccEEEEEecCCCccch
Confidence            5677777777777777777777777777777777754

>PF10455 BAR_2: Bin/amphiphysin/Rvs domain for vesicular trafficking; InterPro: IPR018859 Endocytosis and intracellular transport involve several mechanistic steps: (1) for the internalisation of cargo molecules, the membrane needs to bend to form a vesicular structure, which requires membrane curvature and a rearrangement of the cytoskeleton; (2) following its formation, the vesicle has to be pinched off the membrane; (3) the cargo has to be subsequently transported through the cell and the vesicle must fuse with the correct cellular compartment

Probab=84.35  E-value=43  Score=32.70  Aligned_cols=138  Identities=17%  Similarity=0.307  Sum_probs=94.7

Q ss_pred             ccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHh--HHHHHHHHhhh
Q 020634          104 NENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQ--AVEVSKRQQRV  181 (323)
Q Consensus       104 ~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~q--a~eV~rRq~k~  181 (323)
                      ..+.|++|-..|+.+...+..-|-.+-..+-+....||+.-+..        --..=.++|+.++.-  -.|+.|-..|.
T Consensus       146 ~~~~L~~aL~~~S~~~~~I~~aRL~qD~~I~~~Fn~~l~~~Ln~--------~~~~a~k~RkkV~~sRL~~D~~R~~~k~  217 (289)
T PF10455_consen  146 DEDPLSKALLKYSSAYEKIAQARLEQDQLIQKEFNKKLQTTLNT--------DFKKANKARKKVENSRLQFDAARANLKN  217 (289)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            34679999999999999999999999999999999999875532        223334555555544  45666666665


Q ss_pred             ccCC-C-hhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 020634          182 REAP-N-PENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEM  258 (323)
Q Consensus       182 res~-n-~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EM  258 (323)
                      +..| + .+.-..|+.||-   |+-++    =.+|+.-|-.|=.-=--  +.-|-.+|.|=..||+..+++|..+-.++
T Consensus       218 ~~~pekee~~r~~lE~aED---eFv~a----TeeAv~~Mk~vl~~~e~--l~~Lk~lv~AQl~Yhk~aae~L~~~~~~l  287 (289)
T PF10455_consen  218 KAKPEKEEQLRVELEQAED---EFVSA----TEEAVEVMKEVLDNSEP--LRLLKELVKAQLEYHKKAAEALSELLKSL  287 (289)
T ss_pred             cCCcccCHHHHHHHHHHHH---HHHHH----HHHHHHHHHHHhcCcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3333 3 333445566665   33333    35677777665433222  35577789999999999999999876543

Members of the Amphiphysin protein family are key regulators in the early steps of endocytosis, involved in the formation of clathrin-coated vesicles by promoting the assembly of a protein complex at the plasma membrane and directly assist in the induction of the high curvature of the membrane at the neck of the vesicle. Amphiphysins contain a characteristic domain, known as the BAR (Bin-Amphiphysin-Rvs)-domain, which is required for their in vivo function and their ability to tubulate membranes []. The crystal structure of these proteins suggest the domain forms a crescent-shaped dimer of a three-helix coiled coil with a characteristic set of conserved hydrophobic, aromatic and hydrophilic amino acids. Proteins containing this domain have been shown to homodimerise, heterodimerise or, in a few cases, interact with small GTPases. This entry identifies several fungal BAR domain proteins, such as Gvp36, that are not found by IPR004148 from INTERPRO [].

>cd07631 BAR_APPL1 The Bin/Amphiphysin/Rvs (BAR) domain of Adaptor protein, Phosphotyrosine interaction, PH domain and Leucine zipper containing 1

Probab=82.44  E-value=45  Score=31.56  Aligned_cols=184  Identities=10%  Similarity=0.154  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCC-CCCCccchhhHHHHHhhHhhHHH
Q 020634           44 MQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAEN-NQNINENILPKAAAIYGDARKHV  122 (323)
Q Consensus        44 lq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en-~~~~~~~~LarAa~~yg~a~~~m  122 (323)
                      -|-||-+++.|-.|+-       .-.+              -.++|.--..|---| +|...+..++.+-..|+.+-..|
T Consensus        19 ~~~~~~~~~~~~a~~~-------ls~a--------------~~~~~~~l~~~~~~~f~~~~dDe~i~~~L~kFs~~L~El   77 (215)
T cd07631          19 NQLFQAMHRIYDAQNE-------LSAA--------------THLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDEL   77 (215)
T ss_pred             HHHHHHHHHHHHHHHH-------HHHH--------------HHHHHHHHHHHHHhcCCcCCCcHHHHHHHHHHHHHHHHH
Confidence            4779999999988761       1111              123444444454222 33345566888889999999999


Q ss_pred             HHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCC-hhhhhhhHHHHHHHH
Q 020634          123 EKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPN-PENVAKLHAAEARMQ  201 (323)
Q Consensus       123 EkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n-~e~~~KLq~AE~Kl~  201 (323)
                      +.+|..|..-...-+..||-.-+- -+|-.++-+..+|||...+-++--.-.++=..+.++.-- .|...=+..+..+-.
T Consensus        78 ~~~~~~L~~q~~~sl~~pL~~F~k-edL~~~Ke~KK~FdK~Se~~d~Al~K~a~lsk~K~~E~~~eea~~~v~~tR~~F~  156 (215)
T cd07631          78 SSCHAVLSTQLADAMMFPITQFKE-RDLKEILTLKEVFQIASNDHDAAINRYSRLSKRRENEKVKYEVTEDVYTSRKKQH  156 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            999999998888889999988554 577889999999999999988765544432212111000 011112222111111


Q ss_pred             HHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHH-HHHHHHH
Q 020634          202 ELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAA-ILGDVEA  256 (323)
Q Consensus       202 ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~-ILd~l~~  256 (323)
                        .++|     +=+.++..+++-..=-=|+.|++.++|=.+|...--+ ++.+++.
T Consensus       157 --~~aL-----dYv~qLn~lQ~rKKfefLe~lLs~m~A~~tFFhqG~e~L~~dl~~  205 (215)
T cd07631         157 --QTMM-----HYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEE  205 (215)
T ss_pred             --HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence              2222     2344566666666656678899999999999888888 4445543

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Adaptor protein, Phosphotyrosine interaction, PH domain and Leucine zipper containing (APPL) proteins are effectors of the small GTPase Rab5 that function in endosome-mediated signaling. They contain BAR, pleckstrin homology (PH) and phosphotyrosine binding (PTB) domains. They form homo- and hetero-oligomers that are mediated by their BAR domains. Vertebrates contain two APPL proteins, APPL1 and APPL2. APPL1 interacts with diverse receptors (e.g. NGF receptor TrkA, FSHR, adiponectin receptors) and signaling proteins (e.g. Akt, PI3K), and may function as an adaptor linked to many distinct signaling pathways. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be invo

>KOG4226 consensus Adaptor protein NCK/Dock, contains SH2 and SH3 domains [Signal transduction mechanisms]

Probab=80.37  E-value=2.1  Score=42.56  Aligned_cols=75  Identities=27%  Similarity=0.316  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhcCCCCCCCCC----CCccchhhee---eeeccCCCcCCccceeeecCCEEEEEEecCcc
Q 020634          245 LRIAAILGDVEAEMVSEKQRKESAPPVIPSE----NSSQKAVYFL---AEAIHPFTAASEKELSLGVGDYVVVRKVCYIS  317 (323)
Q Consensus       245 qrv~~ILd~l~~EMvsE~q~~Es~~~~~~~~----~~~~~~~yFl---aev~hpf~aese~ELsLsvGDyVVVRqVs~~G  317 (323)
                      .+-.+|...|.+-.-+--.++-|++-.+++.    .-...--|=|   |-|-+.|.|+-|.||||-.||.|.|=.-++.|
T Consensus        62 ~~~~si~knlkd~~g~kt~~k~s~~~~~~sp~~d~~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDG  141 (379)
T KOG4226|consen   62 LKKGSIVKNLKDTLGLKTRRKTSARDASPSPSTDAEYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVMEKSSDG  141 (379)
T ss_pred             hhhhHHHHhhhhccccccccCCCccccCCCCCccccCCcchhhhcCCceEEEEeeccccccccccccCcEEEEEEeccCc
Confidence            3456777777776655434444433222111    1111112222   55788999999999999999999999999999


Q ss_pred             hh
Q 020634          318 FL  319 (323)
Q Consensus       318 Ws  319 (323)
                      |-
T Consensus       142 WW  143 (379)
T KOG4226|consen  142 WW  143 (379)
T ss_pred             ce
Confidence            94

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	323
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1i4d_A	224	Arfaptin 2, partner of RAC1; coiled coil, G-protei	2e-05
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	7e-05
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 6e-08
 Identities = 58/370 (15%), Positives = 110/370 (29%), Gaps = 103/370 (27%)

Query: 3   SLRRQASKLKEQVAKQQQAVIKQFSASGYERSDVMV-----IDEVEMQ-RHQQLEKLY-- 54
           +L+   S   E V +  Q ++ Q   +   RSD        I  ++ + R     K Y  
Sbjct: 188 NLKNCNSP--ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245

Query: 55  --------RSTRGTKDFQ---------RDLVKVAEVFTAIGYKHI---EAGTKLSEDCCR 94
                   ++ +    F          R   +V +  +A    HI        L+ D   
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSCKILLTTRF-KQVTDFLSAATTTHISLDHHSMTLTPD--- 301

Query: 95  YGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLD--PLRAMITGAPLED 152
              E      +++L K             + Q+     L  +VL   P R  I    + D
Sbjct: 302 ---EV-----KSLLLKYLDC---------RPQD-----LPREVLTTNPRRLSIIAESIRD 339

Query: 153 ARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPN--------PENVAKLHAAEARMQELK 204
                  +  +  +  T  +E S       E           P +    H     +  + 
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA---HIPTILLSLIW 396

Query: 205 AN------MAILGKEAAAALAAIEAQQHRLT----FQRLVAMVEGEKNYHLRIAAILGDV 254
            +      M ++ K    +L   + ++  ++    +  L   +E E   H  I      V
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI------V 450

Query: 255 EAEMVSEKQRKESAPPVIPSENSSQKAVYFLAE-AIHPFTAASEKELSLGVGDYVVVRKV 313
           +   + +    +   P  P  +      YF +    H       + ++L        R V
Sbjct: 451 DHYNIPKTFDSDDLIP--PYLDQ-----YFYSHIGHHLKNIEHPERMTL-------FRMV 496

Query: 314 CYI--SFLRQ 321
            ++   FL Q
Sbjct: 497 -FLDFRFLEQ 505

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 4e-06
 Identities = 38/285 (13%), Positives = 72/285 (25%), Gaps = 77/285 (27%)

Query: 37  MVIDEVEMQRHQQ------LEKLYRS--TRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKL 88
           M  +  E Q   +       +    +   +  +D  + ++   E+   I  K   +GT  
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 89  SEDC-CRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSS---QVLDPLRAM 144
                     E  Q   E +L                 + ++  L+S    +   P  +M
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVL-----------------RINYKFLMSPIKTEQRQP--SM 107

Query: 145 ITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELK 204
           +T           + Y   R          +K    V      +   KL  A   + EL+
Sbjct: 108 MT-----------RMYIEQRDRLYNDNQVFAKYN--V---SRLQPYLKLRQA---LLELR 148

Query: 205 AN-------MAILGKE--AAAALAAIEAQQHR------LTF---QRLVAMVEGEKNYHLR 246
                    +   GK   A     + + Q         L          ++E  +    +
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 247 IAAILGDVEAEMVSEKQRKESAPPVIPSENSSQKAVYFLAEAIHP 291
           I            + K R  S            +    L    + 
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSI---------QAELRRLLKSKPYE 244

>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A* Length = 224

 Score = 44.0 bits (103), Expect = 2e-05
 Identities = 34/223 (15%), Positives = 79/223 (35%), Gaps = 15/223 (6%)

Query: 48  QQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENI 107
            Q+E L    R TK     ++++    TA  Y  ++    L +       ++ +      
Sbjct: 11  LQIELL----RETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPE------ 60

Query: 108 LPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA 167
           L +      + +K + K  E     ++   +  +  ++T   +ED     ++Y   R E 
Sbjct: 61  LQEEFGYNAETQKLLCKNGETLLGAVNF-FVSSINTLVTKT-MEDTLMTVKQYEAARLEY 118

Query: 168 ETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHR 227
           +    ++ +     R+A       +L +A+A  Q  +     L  + A  L  +E  + +
Sbjct: 119 DAYRTDLEELSLGPRDA---GTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIK 175

Query: 228 LTFQRLVAMVEGEKNYHLRIAAILGDVEAEMVSEKQRKESAPP 270
           +  ++L+        Y       L     +   + +   +  P
Sbjct: 176 VMHKQLLLFHNAVSAYFAGNQKQLEQTLQQFNIKLRPPGAEKP 218

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 263 QRKESAPPVIPSENSSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVC 314
           + + S+     S +S  K  +    AI+ F  +   +LSL +GD V +++ C
Sbjct: 41  EGRGSSGSSGSSGSSGDKERH--GVAIYNFQGSGAPQLSLQIGDVVRIQETC 90

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 285 LAEAIHPFTAASEKELSLGVGDYVVVRK 312
           +A+    + A+  ++LSL  G  +++ K
Sbjct: 9   IAQVTSAYVASGSEQLSLAPGQLILILK 36

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	323
2fic_A	251	Bridging integrator 1; BAR domain, homodimer, coil	98.13
1zww_A	256	SH3-containing GRB2-like protein 2; coiled coil, t	97.96
1uru_A	244	Amphiphysin; endocytosis, coiled-coil, membrane cu	97.86
2q12_A	265	DIP13 alpha, DCC-interacting protein 13 alpha; APP	97.86
2z0v_A	240	SH3-containing GRB2-like protein 3; helix bundle,	97.67
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	97.63
2q13_A	385	DCC-interacting protein 13 alpha; APPL1, BAR domai	97.56
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	97.49
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	97.47
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	97.45
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	97.45
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	97.43
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	97.42
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	97.42
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	97.42
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	97.42
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	97.42
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	97.42
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	97.41
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	97.4
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	97.38
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	97.37
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	97.37
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	97.36
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	97.36
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	97.35
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	97.35
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	97.35
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	97.34
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	97.33
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.32
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	97.31
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	97.31
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	97.31
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	97.31
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	97.3
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	97.29
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	97.29
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	97.29
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	97.29
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	97.27
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	97.27
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	97.26
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	97.26
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	97.26
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	97.25
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	97.25
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	97.25
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	97.24
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	97.24
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	97.23
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	97.23
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	97.23
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	97.23
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	97.23
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	97.22
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	97.22
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	97.2
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	97.19
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	97.19
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	97.19
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	97.19
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	97.18
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	97.18
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	97.17
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	97.17
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	97.17
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	97.17
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	97.16
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	97.16
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	97.15
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	97.15
1awj_A	77	ITK; transferase, regulatory intramolecular comple	97.15
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	97.14
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	97.14
3u23_A	65	CD2-associated protein; structural genomics, struc	97.14
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	97.14
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	97.13
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	97.13
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	97.13
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	97.12
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	97.12
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	97.12
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	97.12
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	97.12
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	97.12
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	97.11
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	97.1
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	97.1
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	97.1
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	97.09
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	97.09
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	97.09
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	97.08
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	97.08
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	97.07
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	97.06
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	97.06
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	97.06
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	97.05
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	97.04
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	97.04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	97.03
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	97.02
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	97.02
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	97.02
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	97.02
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	97.02
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	97.01
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	97.01
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	97.01
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	97.0
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	97.0
1i07_A	60	Epidermal growth factor receptor kinase substrate	97.0
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	97.0
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	96.99
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	96.99
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	96.98
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	96.97
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	96.97
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	96.97
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	96.95
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	96.95
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	96.95
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	96.93
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	96.93
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	96.92
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	96.92
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	96.91
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	96.91
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	96.89
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	96.89
1wxb_A	68	Epidermal growth factor receptor pathway substrate	96.88
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	96.88
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	96.85
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	96.84
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	96.84
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	96.83
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	96.83
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	96.82
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	96.79
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	96.79
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	96.77
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	96.73
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	96.72
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	96.71
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	96.71
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	96.67
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	96.67
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	96.66
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	96.64
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	96.63
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	96.62
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	96.61
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	96.61
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	96.61
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	96.6
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	96.6
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	96.56
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	96.54
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	96.53
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	96.52
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	96.51
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	96.5
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	96.46
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	96.44
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	96.42
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	96.39
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	96.39
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	96.39
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	96.37
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	96.36
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	96.27
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	95.84
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	95.74
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	95.72
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	95.67
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	95.62
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	95.61
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	95.36
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	95.22
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	95.08
4h8s_A	407	DCC-interacting protein 13-beta; BAR domain, pleck	95.07
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	94.47
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	93.41
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	93.68
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	93.3
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	93.2
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	93.0
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	92.82
4avm_A	237	Bridging integrator 2; protein binding, plasma mem	92.77
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	91.28
1u3o_A	82	Huntingtin-associated protein-interacting protein;	91.46
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	90.75
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	90.15
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	89.66
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	87.66
2ykt_A	253	Brain-specific angiogenesis inhibitor 1-associate	86.83

>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A

Probab=98.13  E-value=0.00045  Score=59.69  Aligned_cols=219  Identities=16%  Similarity=0.194  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchh
Q 020634           11 LKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSE   90 (323)
Q Consensus        11 lrEqVAkQQQAV~Kqf~~~gy~~~d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLae   90 (323)
                      +..++.+-+|.|...+|++-     -. .|+.=-..-+++..+...+   +.+++++-    .|+..-..-+.....|++
T Consensus        28 ~~K~~~Ra~q~~~~k~G~~e-----~T-~D~~Fe~~~~~f~~~e~~~---~~l~k~~k----~y~~~~~~~~~~~~~l~~   94 (251)
T 2fic_A           28 VQKKLTRAQEKVLQKLGKAD-----ET-KDEQFEQCVQNFNKQLTEG---TRLQKDLR----TYLASVKAMHEASKKLNE   94 (251)
T ss_dssp             ------------------------------CHHHHHHHHHHHHHHHH---HHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhHHHHHHcCCcc-----cc-CCHHHHHHHHHHHHHHHHH---HHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence            35667777889999998332     22 2433111222332222222   22333222    222111122233445666


Q ss_pred             hhhh-hccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHH
Q 020634           91 DCCR-YGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAET  169 (323)
Q Consensus        91 Dc~K-YG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~  169 (323)
                      .... ||....   .++.+....-.|+       .--.++...+.++|.+||...+ + -+.+.+++-...++-|-+-+.
T Consensus        95 ~~~~l~~~~~~---~~~~~~~~~~~~~-------~~~~d~~~~l~~~vi~Pl~~~~-~-~~~~i~~~ikKR~~k~lDyD~  162 (251)
T 2fic_A           95 CLQEVYEPDWP---GRDEANKIAENND-------LLWMDYHQKLVDQALLTMDTYL-G-QFPDIKSRIAKRGRKLVDYDS  162 (251)
T ss_dssp             HHHHHCCTTST---THHHHHHHHHHHH-------HHHHHHHHHHHHHTHHHHHHHH-H-THHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCcC---CchhHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH-H-HhHHHHHHHHHHHHHHhhHHH
Confidence            6555 654432   2223333222233       2223455567799999999999 3 488888887777777777766


Q ss_pred             hHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHH
Q 020634          170 QAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAA  249 (323)
Q Consensus       170 qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~  249 (323)
                      .-..+.+-+.|    +.. ...||..||.++.+.+.....|-..--.=|-...+-...+-..=|.++|++...||..+..
T Consensus       163 ~~~~l~kl~~k----~~k-d~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~f~~~Q~~f~~~~~~  237 (251)
T 2fic_A          163 ARHHYESLQTA----KKK-DEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSK  237 (251)
T ss_dssp             HHHHHHHHHC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc----CcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555544433    211 3578888999999998888777666666666665555444446788999999999999999


Q ss_pred             HHHHHHHHHH
Q 020634          250 ILGDVEAEMV  259 (323)
Q Consensus       250 ILd~l~~EMv  259 (323)
                      ++.+|...|.
T Consensus       238 ~~~~L~~~l~  247 (251)
T 2fic_A          238 LNQNLNDVLV  247 (251)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998874

>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A

Probab=97.96  E-value=0.00043  Score=61.17  Aligned_cols=151  Identities=19%  Similarity=0.321  Sum_probs=108.4

Q ss_pred             hchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHH
Q 020634           87 KLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQE  166 (323)
Q Consensus        87 KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQE  166 (323)
                      .|++-+-.+|.+=+   .++.+..|-..||.+...|...+..+...+.+.|.+||+..+. .-+-++++...+.+..|-+
T Consensus        92 ~L~~~m~~~~~~l~---~~s~~g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~-~~~k~i~k~rkkl~~~rLd  167 (256)
T 1zww_A           92 LLAEAMLKFGRELG---DDCNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHD-KDLREIQHHLKKLEGRRLD  167 (256)
T ss_dssp             HHHHHHHHHHHHHC---SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH-THHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            47777777776532   3456899999999999999999999999999999999998764 3456778888888888877


Q ss_pred             HHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHH
Q 020634          167 AETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLR  246 (323)
Q Consensus       167 aE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqr  246 (323)
                      -++-     |  .|.+..  ++  .-|+.|+.+..+.+       .++...|-.+-+=. -=-+.-|.++|++...||..
T Consensus       168 yD~~-----k--~k~~k~--~e--eEle~A~~~fe~~~-------e~~~~~m~~l~~~e-~e~~~~L~~~v~aQl~y~~~  228 (256)
T 1zww_A          168 FGYK-----K--KRQGKI--PD--EELRQALEKFDESK-------EIAESSMFNLLEMD-IEQVSQLSALVQAQLEYHKQ  228 (256)
T ss_dssp             HHHH-----H--HTTTTS--CH--HHHHHHHHHHHHHH-------HHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-----H--HHhccc--cH--HHHHHHHHHHHHHH-------HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            7763     2  232211  11  12455555555544       55556665443321 11247789999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 020634          247 IAAILGDVEAEMVS  260 (323)
Q Consensus       247 v~~ILd~l~~EMvs  260 (323)
                      ..++|.+|..++-.
T Consensus       229 ~~e~L~~l~~~l~~  242 (256)
T 1zww_A          229 AVQILQQVTVRLEE  242 (256)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999888754

>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1

Probab=97.86  E-value=0.0013  Score=55.84  Aligned_cols=222  Identities=16%  Similarity=0.250  Sum_probs=123.9

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhc
Q 020634            9 SKLKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKL   88 (323)
Q Consensus         9 sklrEqVAkQQQAV~Kqf~~~gy~~~d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KL   88 (323)
                      +-+..++.|-.|.|...+|.+     +-. .|+.=-...+++..+..   ..+.+++++-    .|+..-..-......|
T Consensus        11 ~~~~k~~~R~~q~~~~k~G~~-----e~t-~D~~fe~~~~~f~~~e~---~~~~l~k~~~----~y~~~~~~~~~~~~~l   77 (244)
T 1uru_A           11 KSVQKHAGRAKEKILQNLGKV-----DRT-ADEIFDDHLNNFNRQQA---SANRLQKEFN----NYIRCVRAAQAASKTL   77 (244)
T ss_dssp             ---------------CCSSCT-----TCC-HHHHHHHHHHHHHHHHH---HHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCC-----ccc-CCHHHHHHHHHHHHHHH---HHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence            345556777788888888733     222 25432112222222222   2233333332    2221111112223446


Q ss_pred             hhhhhh-hccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHH
Q 020634           89 SEDCCR-YGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEA  167 (323)
Q Consensus        89 aeDc~K-YG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEa  167 (323)
                      ++.... |+.+.+   ..+    +...|   ...++.-..+|...+.+.|.+||...+  .-+.+.+++-...++-|-+-
T Consensus        78 ~~~~~~l~~~~~~---~~~----~~~~~---~~~~~~~~~~~~~~~~~~vi~Pl~~~~--~~~~~i~~~ikKR~~k~lDy  145 (244)
T 1uru_A           78 MDSVCEIYEPQWS---GYD----ALQAQ---TGASESLWADFAHKLGDQVLIPLNTYT--GQFPEMKKKVEKRNRKLIDY  145 (244)
T ss_dssp             HHHHHHHSCTTST---THH----HHHHH---HHHHHHHHHHHHHHHHTTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCC---Cch----HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhH
Confidence            666555 554432   111    22222   234666666788888899999999998  46778888877755555565


Q ss_pred             HHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHH
Q 020634          168 ETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRI  247 (323)
Q Consensus       168 E~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv  247 (323)
                      +..-..+.+-+.|...  + ....||..||.++.+.+.....|-..--.=|-...+....+-..=|.++|++.-.||..+
T Consensus       146 D~~~~~l~kl~~k~~k--~-kd~~kl~~ae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~fv~~q~~~~~~~  222 (244)
T 1uru_A          146 DGQRHSFQNLQANANK--R-KDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHNET  222 (244)
T ss_dssp             HHHHHHHHHHHTTTCB--T-TBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccc--C-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555554443200  2 235688889999998888887777777777777776666666677889999999999999


Q ss_pred             HHHHHHHHHHH
Q 020634          248 AAILGDVEAEM  258 (323)
Q Consensus       248 ~~ILd~l~~EM  258 (323)
                      ..|+..|..-|
T Consensus       223 ~~~~~~l~~~~  233 (244)
T 1uru_A          223 AKIYSELEAIV  233 (244)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888887644

>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A

Probab=97.86  E-value=0.0046  Score=54.08  Aligned_cols=198  Identities=8%  Similarity=0.085  Sum_probs=152.6

Q ss_pred             HHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCC-CCCCccchhhHHHHHhhHhhHHHHHHH
Q 020634           48 QQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAEN-NQNINENILPKAAAIYGDARKHVEKEQ  126 (323)
Q Consensus        48 q~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en-~~~~~~~~LarAa~~yg~a~~~mEkEr  126 (323)
                      ..|.-+=..+-.-+.+=+.+++.+..++..|..-....++|++.-..|+... +.+.+++.+..+-..||.+.+.|+.-|
T Consensus        21 ~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~~~~~L~~f~~~l~ei~~~~  100 (265)
T 2q12_A           21 SLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCH  100 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444555667788899999999999988889999999999998752 113455677888889999999999999


Q ss_pred             HHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHH
Q 020634          127 EDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKAN  206 (323)
Q Consensus       127 e~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~  206 (323)
                      ..|+.-+..-|.+||+..+.+. |..++.+..+||+.+.+-++-..-.+. ..|.+   .+|  ..|+.|+.+|.+.+.+
T Consensus       101 ~~l~~~~~~~~~~PL~~f~~~d-lk~~ke~kk~fdk~~~~yd~al~k~~~-~~k~k---~~e--~~l~Ea~~~l~~~Rk~  173 (265)
T 2q12_A          101 AVLSTQLADAMMFPITQFKERD-LKEILTLKEVFQIASNDHDAAINRYSR-LSKKR---END--KVKYEVTEDVYTSRKK  173 (265)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTSC---CCH--HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC---cch--hhHHHHHHHHHHHHHH
Confidence            9999999999999999999875 567888889999999999865554332 12222   122  3477888888888888


Q ss_pred             HHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 020634          207 MAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILG  252 (323)
Q Consensus       207 Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd  252 (323)
                      .--..-+-...|..+....----++-|++.+++--+|++.-.+++.
T Consensus       174 f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~  219 (265)
T 2q12_A          174 QHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLN  219 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888899998888866556788899999999999888887763

>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}

Probab=97.67  E-value=0.0013  Score=57.70  Aligned_cols=151  Identities=18%  Similarity=0.313  Sum_probs=112.2

Q ss_pred             hchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHH
Q 020634           87 KLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQE  166 (323)
Q Consensus        87 KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQE  166 (323)
                      -|+.-+..+|.+=.   .++.|+.|-..||.+..+|...+..|..-...-|.+||+..+. .-+-++.+.-.+.++.|.+
T Consensus        76 ~L~~~m~~~~~~l~---~ds~~g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~-~d~k~i~~~rKkle~~rLd  151 (240)
T 2z0v_A           76 LLGDCMLKYGKELG---EDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQD-KDLKEIGHHLKKLEGRRLD  151 (240)
T ss_dssp             HHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH-THHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcC---CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            38888888888743   4567999999999999999999999999999999999998875 3455677777888888887


Q ss_pred             HHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHH
Q 020634          167 AETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLR  246 (323)
Q Consensus       167 aE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqr  246 (323)
                      -++-     |.  |.+..  +  -.-|+.|+.++.+.+..       +...|-.|-+=. -=-+.-|.++|+|...||..
T Consensus       152 ~D~a-----k~--k~~k~--~--eeEl~~A~~~fe~~~e~-------~~~~m~~~~~~~-~e~l~~l~~~v~aQl~y~~~  212 (240)
T 2z0v_A          152 YDYK-----KK--RVGKI--P--DEEVRQAVEKFEESKEL-------AERSMFNFLEND-VEQVSQLAVFIEAALDYHRQ  212 (240)
T ss_dssp             HHHH-----HT--TTTSS--C--HHHHHHHHHHHHHHHHH-------HHHHHHHHHHST-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-----HH--Hhccc--c--HHHHHHHHHHHHHHHHH-------HHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            7753     22  22211  1  22366777777766554       455565553221 12245789999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 020634          247 IAAILGDVEAEMVS  260 (323)
Q Consensus       247 v~~ILd~l~~EMvs  260 (323)
                      ..+||.+|...+-.
T Consensus       213 ~~e~L~~l~~~l~~  226 (240)
T 2z0v_A          213 STEILQELQSKLQM  226 (240)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988754

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=97.63  E-value=3.9e-05  Score=56.28  Aligned_cols=39  Identities=26%  Similarity=0.366  Sum_probs=34.7

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..|-..|+++|.++.++||||..||.|.|-.-...||-.
T Consensus         5 ~~~~~~Alydy~a~~~~ELs~~~Gd~i~v~~~~~~gWw~   43 (65)
T 2lj0_A            5 DLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFV   43 (65)
T ss_dssp             SSCEEEESSCBCCSSTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             cCEEEEEceeECCCCcCCcCCCCCCEEEEeEeCCCCEEE
Confidence            346778999999999999999999999998888889953

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A

Probab=97.56  E-value=0.024  Score=52.02  Aligned_cols=189  Identities=7%  Similarity=0.078  Sum_probs=134.9

Q ss_pred             hhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCC-CCccchhhHHHHHhhHhhHHHHHHHHHHHHHhh
Q 020634           56 STRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQ-NINENILPKAAAIYGDARKHVEKEQEDFNRLLS  134 (323)
Q Consensus        56 STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~-~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~  134 (323)
                      .+-.-+.+=+.|++.+..++..|........+|++.-..|+.+++. +.+++.+..+-..||.+.+.|+.-+..|+.-+.
T Consensus        29 ~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l~~f~~~~~ei~~~~~~l~~~~~  108 (385)
T 2q13_A           29 DATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCHAVLSTQLA  108 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333455666777777777777776666677888888888875421 234455777888999999999999999999999


Q ss_pred             hhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHH
Q 020634          135 SQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEA  214 (323)
Q Consensus       135 ~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA  214 (323)
                      ..|.+||+..+.+. |..++.+..+||+.+.+-++-..-.+. ..|.+   .+  ...++-|+..|.+.+..-.-..-+=
T Consensus       109 ~~~~~PL~~f~~~d-i~~~ke~kk~fek~~~~yd~al~k~~~-~~k~k---~~--e~~~~ea~~~l~~~rk~f~~~~ldy  181 (385)
T 2q13_A          109 DAMMFPITQFKERD-LKEILTLKEVFQIASNDHDAAINRYSR-LSKKR---EN--DKVKYEVTEDVYTSRKKQHQTMMHY  181 (385)
T ss_dssp             HHTHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-CCSSS---CC--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC---ch--hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999874 566788888999999998865443222 11211   22  2235667777777777766666666


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 020634          215 AAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAIL  251 (323)
Q Consensus       215 ~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~IL  251 (323)
                      ...|..++...-.--|+-|+..+.+--+|++.-.+++
T Consensus       182 ~~~l~~l~~rk~~e~le~l~~~~~a~~~ff~~g~~~~  218 (385)
T 2q13_A          182 FCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENL  218 (385)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7778888776666677888888888877766655553

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=97.49  E-value=7.8e-05  Score=52.20  Aligned_cols=35  Identities=29%  Similarity=0.302  Sum_probs=31.7

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++++|.++.+.||+|.+||.|.|-+....||-.
T Consensus         6 ~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   40 (62)
T 2fpe_A            6 HRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYE   40 (62)
T ss_dssp             EEECSCBCCSSTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEECccCCccCcCcCcCCCCCEEEEEEecCCCEEE
Confidence            57899999999999999999999998778899953

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=97.47  E-value=8.6e-05  Score=51.23  Aligned_cols=36  Identities=31%  Similarity=0.337  Sum_probs=32.5

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.|||+..||.|.|-+-...||-.
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   38 (58)
T 1uti_A            3 WARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWT   38 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             EEEECccCCCCCcCCCCCCCCCEEEEEEECCCCEEE
Confidence            468999999999999999999999998888889953

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=97.45  E-value=9.5e-05  Score=50.86  Aligned_cols=36  Identities=17%  Similarity=0.280  Sum_probs=32.6

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|.++.++||||..||.|.|-+-..+||-.
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   39 (58)
T 1sem_A            4 FVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE   39 (58)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEE
T ss_pred             EEEECcCCCCCCCCCcCCCCCCEEEEEEecCCCEEE
Confidence            468999999999999999999999999888889953

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=97.45  E-value=9.4e-05  Score=51.17  Aligned_cols=35  Identities=17%  Similarity=0.198  Sum_probs=32.2

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -+.++++|.++.++||||..||.|.|-+-...||-
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   37 (58)
T 2bz8_A            3 EAIVEFDYQAQHDDELTISVGEIITNIRKEDGGWW   37 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCTTTEE
T ss_pred             EEEECcccCCCCcCEeeECCCCEEEEEEeCCCCEE
Confidence            47899999999999999999999999888889995

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=97.43  E-value=0.00011  Score=50.62  Aligned_cols=36  Identities=19%  Similarity=0.322  Sum_probs=32.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-.-..+||-.
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   40 (58)
T 2drm_A            5 QVKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWE   40 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEE
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEEEecCCCEEE
Confidence            478999999999999999999999999888899953

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=97.42  E-value=0.00011  Score=50.57  Aligned_cols=35  Identities=20%  Similarity=0.342  Sum_probs=32.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|+++.+.||||..||.|.|-+-..+||-
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   37 (57)
T 1cka_A            3 YVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWW   37 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEE
T ss_pred             EEEECCcCCCCCCCCCCCCCCCEEEEEEecCCCcE
Confidence            36799999999999999999999999888889994

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=97.42  E-value=0.00011  Score=50.79  Aligned_cols=36  Identities=22%  Similarity=0.319  Sum_probs=32.4

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-+-..+||-.
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   39 (58)
T 1zx6_A            4 YVEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYK   39 (58)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEECSSSEEE
T ss_pred             EEEECceECCCCCCCccCCCCCEEEEEEecCCCEEE
Confidence            467999999999999999999999998888889853

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=97.42  E-value=0.0001  Score=52.97  Aligned_cols=36  Identities=28%  Similarity=0.282  Sum_probs=32.4

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|.++.+.||+|.+||.|.|-.....||-.
T Consensus         8 ~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~~gW~~   43 (71)
T 2fpf_A            8 THRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYE   43 (71)
T ss_dssp             CEEECSCBCCSSTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEEECeeECccCCCcccCcCCcEEEEeEecCCCEEE
Confidence            467999999999999999999999998888899953

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=97.42  E-value=0.00011  Score=50.20  Aligned_cols=35  Identities=31%  Similarity=0.366  Sum_probs=32.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -+.++++|.++.+.||||..||.|.|-+-...||-
T Consensus         3 ~a~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~   37 (58)
T 4e6r_A            3 PAFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWW   37 (58)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEECTTSEE
T ss_pred             EEEECccCCCCCCCEeeEeCCCEEEEeEcCCCCEE
Confidence            46789999999999999999999999888889995

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=97.42  E-value=0.00012  Score=51.14  Aligned_cols=37  Identities=30%  Similarity=0.409  Sum_probs=33.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.+.++++|.++.+.||||..||.|.|-+-..+||-.
T Consensus         5 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   41 (60)
T 1w70_A            5 MRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLE   41 (60)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSSEEE
T ss_pred             cEEEECccCCcCCCCCccCCCCCEEEEEEeCCCCeEE
Confidence            3578999999999999999999999998888899953

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.42  E-value=8.2e-05  Score=51.19  Aligned_cols=36  Identities=8%  Similarity=0.208  Sum_probs=31.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecC-cchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCY-ISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~-~GWse  320 (323)
                      -+.++++|+++.+.||||..||.|.|-+... +||-.
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~   39 (58)
T 1zuu_A            3 ENKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTK   39 (58)
T ss_dssp             CCEECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEEE
T ss_pred             EEEEeeeECCcCCCcccCCCCCEEEEeEcCCCCCCEE
Confidence            4789999999999999999999999988776 79953

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=97.41  E-value=0.00012  Score=52.26  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=33.6

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -+.+.++++|+++.+.||||..||.|.|-.....||-
T Consensus         7 ~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww   43 (68)
T 1tg0_A            7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWY   43 (68)
T ss_dssp             SEEEEESSCBCCSCTTBCCBCTTCEEEEEEECSSSEE
T ss_pred             CEEEEECeeECcCCcCCCCCCCCCEEEEEEecCCCeE
Confidence            3678999999999999999999999999887888884

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=97.40  E-value=0.00022  Score=53.49  Aligned_cols=44  Identities=18%  Similarity=0.342  Sum_probs=37.0

Q ss_pred             CccchhheeeeeccCCCcCCccceeeecCCEEEEEEe--cCcchhh
Q 020634          277 SSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKV--CYISFLR  320 (323)
Q Consensus       277 ~~~~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqV--s~~GWse  320 (323)
                      .+.......+.++++|+++.+.||+|..||.|.|-+-  ...||-.
T Consensus        11 ~~~~~~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~   56 (91)
T 1wx6_A           11 GQGSRVLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWK   56 (91)
T ss_dssp             CCSCCCCEEEEESSCCCCSSSSBCCCCTTCEEEEEECCSSCTTEEE
T ss_pred             cCCCCccEEEEEeecCCcCCCCcccCCCCCEEEEEECCCCCCCcEE
Confidence            3344466789999999999999999999999999887  6788853

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.38  E-value=0.00016  Score=52.30  Aligned_cols=40  Identities=15%  Similarity=0.198  Sum_probs=34.5

Q ss_pred             chhheeeeeccCCCcCCccceeeecCCEEEEEEe---cCcchh
Q 020634          280 KAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKV---CYISFL  319 (323)
Q Consensus       280 ~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqV---s~~GWs  319 (323)
                      .....++.++++|+++.+.||+|..||.|.|-+-   ..+||-
T Consensus         5 ~~~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww   47 (73)
T 2dl7_A            5 SSGVCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFW   47 (73)
T ss_dssp             CCCCEEEEESSCBCCSSTTBCCBCTTCEEEEEECCCSSSSSCE
T ss_pred             CCCCEEEEECccCCcCCCCcCCCCCCCEEEEEECCCCCCCCcE
Confidence            3356788999999999999999999999999876   478885

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.37  E-value=0.00014  Score=50.91  Aligned_cols=36  Identities=22%  Similarity=0.387  Sum_probs=32.7

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-.-..+||-.
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   42 (62)
T 1k4u_S            7 QVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLE   42 (62)
T ss_dssp             EEECCSCBCCCSSSBCCBCSSCEEEEEEESSSSCEE
T ss_pred             EEEECCCCCcCCCCCccCCCCCEEEEEEeCCCCEEE
Confidence            468999999999999999999999998888899953

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=97.37  E-value=0.00014  Score=50.34  Aligned_cols=35  Identities=17%  Similarity=0.327  Sum_probs=32.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||||..||.|.|-.-..+||-
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   39 (58)
T 1zlm_A            5 VFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWW   39 (58)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEEEeCCCCEE
Confidence            57899999999999999999999999888888995

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=97.36  E-value=0.00015  Score=50.29  Aligned_cols=36  Identities=28%  Similarity=0.359  Sum_probs=32.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|.++.+.||||..||.|.|-+-..+||-.
T Consensus         6 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   41 (59)
T 2g6f_X            6 VVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWE   41 (59)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEEECceeCCCCcCCcCCCCCCEEEEEEecCCCEEE
Confidence            578999999999999999999999998888899953

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=97.36  E-value=0.00015  Score=50.46  Aligned_cols=36  Identities=19%  Similarity=0.238  Sum_probs=32.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-+-..+||-.
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   42 (60)
T 2xmf_A            7 QCKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWT   42 (60)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEEECccCCcCCcCCcCCCCCCEEEEEEecCCCEEE
Confidence            478999999999999999999999998888899953

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=97.35  E-value=0.00014  Score=50.30  Aligned_cols=34  Identities=21%  Similarity=0.211  Sum_probs=31.1

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +.++++|+++.+.||||..||.|.|-+-...||-
T Consensus         3 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   36 (58)
T 1jo8_A            3 ATAEYDYDAAEDNELTFVENDKIINIEFVDDDWW   36 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEECceECCCCCCCcccCCCCEEEEEEecCCCcE
Confidence            5789999999999999999999999888888984

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=97.35  E-value=6.8e-05  Score=54.53  Aligned_cols=35  Identities=14%  Similarity=0.345  Sum_probs=31.4

Q ss_pred             eeeccCCCcCCccc-eeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKE-LSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~E-LsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++|+|+++.++| |||..||.|.|-.....||-.
T Consensus         6 ~rAlydy~~~~~~e~Ls~~~Gd~i~v~~~~~~~Ww~   41 (60)
T 2lx7_A            6 CRTLYPFSGERHGQGLRFAAGELITLLQVPDGGWWE   41 (60)
T ss_dssp             EEESCCCCSCCCSSCCCCCTTCEEEBSCCCTTSCEE
T ss_pred             EEECcccCCCCCCCCccCCCCCEEEEeEecCCCeEE
Confidence            58999999999998 999999999998878889953

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=97.35  E-value=0.00015  Score=49.84  Aligned_cols=37  Identities=19%  Similarity=0.349  Sum_probs=33.0

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..+.++++|.++.+.||||..||.|.|-+-..+||-.
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   39 (58)
T 2vwf_A            3 TYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK   39 (58)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             eEEEECceECCCCcCCcCCCCCCEEEEEEcCCCCEEE
Confidence            3578999999999999999999999998888889853

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=97.34  E-value=0.00015  Score=49.54  Aligned_cols=35  Identities=26%  Similarity=0.324  Sum_probs=30.1

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEec-Ccchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVC-YISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs-~~GWse  320 (323)
                      +.++++|+++.+.||||..||.|.|-+-. .+||-.
T Consensus         3 ~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~   38 (54)
T 2a28_A            3 MEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTY   38 (54)
T ss_dssp             EEBCSCBCCCSTTBCCBCTTCEEEEEECCCSSSEEE
T ss_pred             EEECccCCcCCCCCccCCCCCEEEEEEecCCCCEEE
Confidence            57899999999999999999999776666 489953

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=97.33  E-value=0.00016  Score=51.62  Aligned_cols=37  Identities=30%  Similarity=0.252  Sum_probs=32.8

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec---Ccchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC---YISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs---~~GWse  320 (323)
                      +.+.++++|+++.+.||||..||.|.|-.-.   ..||-.
T Consensus         4 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~   43 (69)
T 1wyx_A            4 VLAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWL   43 (69)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEETTGGGCTTEEE
T ss_pred             EEEEECccCCcCCCCccCCcCCCEEEEeECCCCCCCCcEE
Confidence            5689999999999999999999999998776   688853

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=97.32  E-value=0.00016  Score=50.49  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=32.6

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-+-..+||-.
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   40 (61)
T 1y0m_A            5 AVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWR   40 (61)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             EEEECcCCCcCCCCCcCCcCCCEEEEEEecCCCEEE
Confidence            478999999999999999999999998888889953

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=97.31  E-value=0.00017  Score=50.56  Aligned_cols=36  Identities=19%  Similarity=0.167  Sum_probs=31.6

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEe-cCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKV-CYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqV-s~~GWs  319 (323)
                      +-+.++++|.++.++||||..||.|.|-+- ..+||-
T Consensus         2 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww   38 (62)
T 2j6f_A            2 VDYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWL   38 (62)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEEEECSSTTEE
T ss_pred             EEEEECccCCcCCcCCcCCcCCCEEEEEEecCCCCEE
Confidence            347899999999999999999999988776 778884

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=97.31  E-value=0.0002  Score=50.82  Aligned_cols=38  Identities=32%  Similarity=0.250  Sum_probs=34.0

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -..+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   44 (68)
T 2dl3_A            7 GRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYE   44 (68)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSTTEEE
T ss_pred             CcEEEECccCCCCCcCCccCCCCCEEEEeEecCCCEEE
Confidence            35689999999999999999999999998888889953

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=97.31  E-value=0.00017  Score=50.55  Aligned_cols=36  Identities=28%  Similarity=0.373  Sum_probs=33.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +.+.++++|.++.+.||+|..||.|.|-+....||-
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   42 (64)
T 2ak5_A            7 LVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWW   42 (64)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEE
T ss_pred             EEEEEccccCCcCcCcccCCCCCEEEEeEecCCCEE
Confidence            568899999999999999999999999888889995

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=97.31  E-value=0.00013  Score=50.17  Aligned_cols=35  Identities=29%  Similarity=0.348  Sum_probs=32.0

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++++|.++.+.||+|..||.|.|-+-..+||-.
T Consensus         4 ~~al~d~~~~~~~eLs~~~Gd~i~v~~~~~~gW~~   38 (59)
T 1yn8_A            4 AVALYDFEPENDNELRLAEGDIVFISYKHGQGWLV   38 (59)
T ss_dssp             EEECSCBCCCSTTBCCBCTTCEEEEEEEEETTEEE
T ss_pred             EEECccCCCCCCCCcCCCCCCEEEEEEcCCCCeEE
Confidence            67999999999999999999999998888899953

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=97.30  E-value=0.00018  Score=50.22  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=32.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||+|..||.|.|-.-...||-
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   37 (65)
T 2oaw_A            3 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWW   37 (65)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEEcccCCccCCCCCCCCCCCEEEEEEcCCCCEE
Confidence            46799999999999999999999999888888985

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=97.29  E-value=0.00016  Score=54.87  Aligned_cols=41  Identities=15%  Similarity=0.213  Sum_probs=34.6

Q ss_pred             chhheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          280 KAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       280 ~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.+.++++|+++.++||||..||.|.|-.-...||-.
T Consensus        14 ~~~~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~~~gWw~   54 (83)
T 1neg_A           14 ETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWK   54 (83)
T ss_dssp             ---CCEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             CCCceEEEEccccCCCCCCccccCCCCEEEEEEecCCCEEE
Confidence            34567889999999999999999999999998888889953

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.29  E-value=0.00029  Score=52.50  Aligned_cols=36  Identities=14%  Similarity=0.172  Sum_probs=33.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|+++.+.||+|..||.|.|-+-...||-
T Consensus        20 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   55 (85)
T 2yuq_A           20 TVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWW   55 (85)
T ss_dssp             CEEEESSCCCCSCSSBCCCCBTEEEEEEECCSSSEE
T ss_pred             eEEEECcCCCCCCCCcCCCCCCCEEEEEEecCCCeE
Confidence            678999999999999999999999999888888884

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=97.29  E-value=0.00018  Score=51.49  Aligned_cols=37  Identities=24%  Similarity=0.291  Sum_probs=33.3

Q ss_pred             eeeeeccCCCcC--CccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAA--SEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~ae--se~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..+.++++|.++  ++.||+|..||.|.|-+...+||-+
T Consensus         7 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~   45 (67)
T 2eyx_A            7 IYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWE   45 (67)
T ss_dssp             CBEEECCCBCCCTTCSSBCCBCSSEEEEEEEECTTSEEE
T ss_pred             EEEEEeEEECCCCCCCCccccCCCCEEEEEEecCCCEEE
Confidence            468899999999  9999999999999998888999953

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=97.29  E-value=0.00019  Score=51.62  Aligned_cols=35  Identities=37%  Similarity=0.415  Sum_probs=32.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|+++.+.||||..||.|.|-+-..+||-
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   37 (65)
T 2nwm_A            3 AARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWL   37 (65)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCTTTCE
T ss_pred             EEEEeeeECCCCcCccCCcCCCEEEEEEecCCCEE
Confidence            46799999999999999999999999888889995

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=97.27  E-value=0.0003  Score=52.08  Aligned_cols=39  Identities=23%  Similarity=0.273  Sum_probs=34.3

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus        16 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~~~~gWw~   54 (72)
T 2l0a_A           16 EARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWK   54 (72)
T ss_dssp             CCEEEEESSCBCCSSTTBCCBCTTCEEEEEEEEETTEEE
T ss_pred             CCeEEEECCccCCCCCCccCCCCCCEEEEEEecCCCEEE
Confidence            446688999999999999999999999998877889853

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=97.27  E-value=0.0002  Score=50.23  Aligned_cols=35  Identities=20%  Similarity=0.318  Sum_probs=32.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|+++.+.||+|..||.|.|-+-...||-
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   41 (62)
T 1uj0_A            7 RVRALYDFEAVEDNELTFKHGELITVLDDSDANWW   41 (62)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEEEeCCCCEE
Confidence            57899999999999999999999999988888995

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.26  E-value=0.00019  Score=51.11  Aligned_cols=38  Identities=18%  Similarity=0.234  Sum_probs=33.7

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEec---Ccchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVC---YISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs---~~GWse  320 (323)
                      -+.+.++++|+++.+.||+|..||.|.|-+-.   .+||-.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~   47 (71)
T 2cre_A            7 GLLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWK   47 (71)
T ss_dssp             CEEEEESSCCCCSSSSBCCCCSSCCEEEEESCCTTSTTEEE
T ss_pred             cEEEEECcccCcCCCCCCCCCCCCEEEEeEcCCCCCCCcEE
Confidence            36789999999999999999999999998886   888853

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=97.26  E-value=0.00014  Score=52.12  Aligned_cols=35  Identities=20%  Similarity=0.191  Sum_probs=31.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|.++.+.||+|..||.|.| .-..+||-
T Consensus        11 ~~~~alydy~~~~~~eLs~~~Gd~i~v-~~~~~~Ww   45 (72)
T 2kgt_A           11 PKYVGLWDFKSRTDEELSFRAGDVFHV-ARKEEQWW   45 (72)
T ss_dssp             CEEECCTTCBCSSTTSCBCCTTCCEEE-EEECSSCE
T ss_pred             cEEEEcccCCCCCcCCcCCCCCCEEEE-eeCCCCEE
Confidence            367899999999999999999999999 77788995

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=97.26  E-value=0.00023  Score=48.73  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=31.8

Q ss_pred             eeeccCC-CcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPF-TAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf-~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++++| .++.+.||+|..||.|.|-+-..+||-.
T Consensus         3 ~~al~d~~~~~~~~eLs~~~Gd~i~v~~~~~~gW~~   38 (58)
T 1zuy_A            3 FEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSL   38 (58)
T ss_dssp             EEESSCBCCCSCTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEEecccCCCCCCCcCCCCCCCEEEEEEecCCCeEE
Confidence            5789999 8999999999999999998888899953

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.25  E-value=0.0002  Score=50.94  Aligned_cols=37  Identities=27%  Similarity=0.323  Sum_probs=33.4

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..+.++++|.++.+.||+|..||.|.|-+-..+||-.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~gW~~   44 (70)
T 2ct3_A            8 TPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFV   44 (70)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTEEEEEEEECSSSCEE
T ss_pred             cEEEECccCCcCCcCCccCCCCCEEEEEEECCCCEEE
Confidence            4578999999999999999999999998888899953

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.25  E-value=0.00017  Score=52.74  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=34.6

Q ss_pred             hhheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          281 AVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       281 ~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ...+.+.++++|+++.+.||+|..||.|.|-+-..+||-
T Consensus         8 ~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   46 (76)
T 2epd_A            8 EGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWW   46 (76)
T ss_dssp             SCCEEEEESSCEECSSTTBCEECTTCEEEEEEEEETTEE
T ss_pred             CCCEEEEECcCCCCCCCCccCCCCCCEEEEEEeCCCCEE
Confidence            345678999999999999999999999999887778885

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=97.25  E-value=0.00023  Score=49.38  Aligned_cols=35  Identities=26%  Similarity=0.365  Sum_probs=31.6

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||||..||.|.|-+-...||-
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~   42 (64)
T 4f14_A            8 TYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWM   42 (64)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEEECSSSEE
T ss_pred             EEEECeeeCCcCCCcCCCCCCCEEEEEEeCCCCeE
Confidence            46889999999999999999999988888788995

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=97.24  E-value=0.00019  Score=50.11  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=32.8

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|.++.+.||||..||.|.|-+...+||-
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   42 (60)
T 2gnc_A            7 EFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWW   42 (60)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEEETTEE
T ss_pred             EEEEECCCCCcCCcCCcCCCCCCEEEEEEecCCCEE
Confidence            567899999999999999999999999888788985

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=97.24  E-value=0.00024  Score=50.53  Aligned_cols=36  Identities=17%  Similarity=0.304  Sum_probs=33.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|.++.+.||+|..||.|.|-+-...||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   43 (68)
T 2djq_A            8 PRAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWY   43 (68)
T ss_dssp             CEEEECSCCCSCCTTCCCCCTTCEEEEEECCCSSEE
T ss_pred             eEEEECCCCCCCCcCCccCCCCCEEEEEEecCCCEE
Confidence            568999999999999999999999999888889994

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=97.23  E-value=0.00023  Score=50.68  Aligned_cols=35  Identities=17%  Similarity=0.284  Sum_probs=32.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||||..||.|.|-+-...||-
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   38 (67)
T 1gl5_A            4 IVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWW   38 (67)
T ss_dssp             CEEECSCBCCSSSSBCCBCTTCEEEEEECSSSSEE
T ss_pred             EEEECccCCCCCCCeecCCcCCEEEEEEccCCCcE
Confidence            36789999999999999999999999888888995

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=97.23  E-value=0.019  Score=54.96  Aligned_cols=199  Identities=12%  Similarity=0.133  Sum_probs=103.1

Q ss_pred             HHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhcc--CCCCCCccchhhHHHHHhhHhhHHHHHHHH
Q 020634           50 LEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGA--ENNQNINENILPKAAAIYGDARKHVEKEQE  127 (323)
Q Consensus        50 LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~--en~~~~~~~~LarAa~~yg~a~~~mEkEre  127 (323)
                      ++.||.-+..|..+=++|..=+.==   ..=-.|.+.+|..=|+||-.  .+. ...| +|..|-..+=..-..+-+-+.
T Consensus        24 ~~~L~~r~~~g~~~~~el~~f~keR---a~iE~eYAk~L~kLakk~~~~~~~~-~e~g-tl~~aw~~~~~e~e~~a~~H~   98 (486)
T 3haj_A           24 YKRTVKRIDDGHRLCSDLMNCLHER---ARIEKAYAQQLTEWARRWRQLVEKG-PQYG-TVEKAWMAFMSEAERVSELHL   98 (486)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHSS-SCCS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhccCC-CCcc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4445555555555555554322110   01123567777777777732  111 1233 688777777677777777788


Q ss_pred             HHHHHhhhhhhhHHHHhhcCC------------------------Cc----cchhhHHHHHHHHHHHHHHhHHHHHHHHh
Q 020634          128 DFNRLLSSQVLDPLRAMITGA------------------------PL----EDARHLAQRYSRMRQEAETQAVEVSKRQQ  179 (323)
Q Consensus       128 ~l~r~L~~QV~ePLRaMv~Ga------------------------PL----EDARhLaqRYdRmRQEaE~qa~eV~rRq~  179 (323)
                      .+-..|.++|.+||+..+.-.                        +|    .+......+|+...+|++..-....+  +
T Consensus        99 ~~a~~L~~~v~~~l~~~~~e~~~K~~~~~~kerK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~~~cke~e~a~~~~~~--a  176 (486)
T 3haj_A           99 EVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREAN--S  176 (486)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHCCBCSSSSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence            888899999999999976421                        00    01112334677777775544222211  1


Q ss_pred             hhccCC-ChhhhhhhHHHHHHHHHHHHHHHHhcHHHHH--------------HHHHHHHHhHHHHHHHHHHHHHhhhhHH
Q 020634          180 RVREAP-NPENVAKLHAAEARMQELKANMAILGKEAAA--------------ALAAIEAQQHRLTFQRLVAMVEGEKNYH  244 (323)
Q Consensus       180 k~res~-n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~a--------------AM~aVEaQQQrlTlQRLiaMVeaEr~YH  244 (323)
                      +. +.. ++....|++   .|+...+..+...-.+=..              .|..+=.+-|.+--+||..|-+.=..|+
T Consensus       177 ~~-d~~~t~k~~eK~~---~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~y~~~~~~~~~~lQ~lEeeRi~~lK~~L~~y~  252 (486)
T 3haj_A          177 KA-DPSLNPEQLKKLQ---DKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQ  252 (486)
T ss_dssp             HH-CCCSCSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hc-cccCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11 122 444444443   3333333333322222222              3444444556666677777766666676


Q ss_pred             HHHH----HHHHHHHHHHH
Q 020634          245 LRIA----AILGDVEAEMV  259 (323)
Q Consensus       245 qrv~----~ILd~l~~EMv  259 (323)
                      ..+.    .++++++.+|.
T Consensus       253 ~~l~~~~~~~~~~~~e~l~  271 (486)
T 3haj_A          253 KHLDLSNVAGYKAIYHDLE  271 (486)
T ss_dssp             HHHCCSSCHHHHHHHHHHH
T ss_pred             HHHhhhcchhHHHHHHHHH
Confidence            6542    24555555543

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.23  E-value=0.00023  Score=52.05  Aligned_cols=36  Identities=19%  Similarity=0.337  Sum_probs=32.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|+++.+.||+|..||.|.|-+-..+||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~gWw   43 (80)
T 1ue9_A            8 EIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWW   43 (80)
T ss_dssp             EEEEECSCCCCCSTTBCCCCTTCEEEEEEECSSSEE
T ss_pred             eEEEECcccCCCCCCCCCCCCCCEEEEEEecCCCcE
Confidence            357899999999999999999999999888889995

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=97.23  E-value=0.00026  Score=50.24  Aligned_cols=38  Identities=16%  Similarity=0.151  Sum_probs=34.0

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +..+.++++|+++.+.||||..||.|.|-+-..+||-.
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   43 (67)
T 2o9s_A            6 TGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYE   43 (67)
T ss_dssp             SEEEEECSCBCCSSTTBCCBCTTCEEEEEEECSSSEEE
T ss_pred             CEEEEECccCCcCCcCccCCCCCCEEEEEEecCCCEEE
Confidence            46689999999999999999999999998887889953

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=97.23  E-value=0.00024  Score=48.95  Aligned_cols=35  Identities=23%  Similarity=0.197  Sum_probs=31.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEe-cCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKV-CYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqV-s~~GWs  319 (323)
                      .+.++++|.++.+.||||..||.|.|-+- ..+||-
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww   39 (60)
T 2v1q_A            4 RGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWW   39 (60)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEESSSCSSEE
T ss_pred             EEEEeeeECCCCCCCccCCCCCEEEEEeCCCCCCCE
Confidence            56899999999999999999999998776 378884

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=97.22  E-value=0.00015  Score=50.11  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=30.2

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEE-ecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRK-VCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRq-Vs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-+ ..++||-.
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~   41 (60)
T 2x3w_D            5 RVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCR   41 (60)
T ss_dssp             EEEECSCBCCSSSSBCCBCTTCEEEECSCCCSSSEEE
T ss_pred             EEEECcccCccCCCcccCCCCCEEEEEEccCCCCceE
Confidence            4789999999999999999999999844 34568853

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.22  E-value=0.00045  Score=51.76  Aligned_cols=39  Identities=21%  Similarity=0.313  Sum_probs=34.7

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|+++.+.||+|..||.|.|-.....||-.
T Consensus        16 ~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~   54 (88)
T 1x2q_A           16 VARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWK   54 (88)
T ss_dssp             CCEEEEESSCCCCCSSSCCCCCSSCEEEEEECSCSSSEE
T ss_pred             CCeEEEEcccCCCCCcCccCCCCCCEEEEEEeCCCCEEE
Confidence            446789999999999999999999999999888889953

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=97.20  E-value=0.00024  Score=50.69  Aligned_cols=35  Identities=29%  Similarity=0.338  Sum_probs=32.2

Q ss_pred             eeeeccCCCcC--CccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAA--SEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~ae--se~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|+++  .+.||||..||.|.|-+...+||-
T Consensus         3 ~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~~~~~Ww   39 (67)
T 2bzy_A            3 FAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQW   39 (67)
T ss_dssp             EEEECSCBCSEEECTTBCCBCTTCEEEEEEECSSSEE
T ss_pred             EEEEeeeECCCCCCCCccccCCCCEEEEEEecCCCeE
Confidence            57899999999  999999999999999888889995

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.19  E-value=0.00021  Score=53.25  Aligned_cols=40  Identities=15%  Similarity=0.085  Sum_probs=35.0

Q ss_pred             chhheeeeeccCCCcCCccceeeecCCEEEEEEe--cCcchh
Q 020634          280 KAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKV--CYISFL  319 (323)
Q Consensus       280 ~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqV--s~~GWs  319 (323)
                      +....++.++++|+++.+.||+|..||.|.|-..  ...||-
T Consensus         5 ~~~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww   46 (85)
T 2dlp_A            5 SSGSGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQ   46 (85)
T ss_dssp             SSCCCEEEESSCBCCSSSSBCCBCTTCEEEECCCSCCCTTEE
T ss_pred             CcCCEEEEECCCCCccCcCCccCcCCCEEEEEEccCCCCCeE
Confidence            3455778999999999999999999999999886  788884

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=97.19  E-value=0.00025  Score=51.62  Aligned_cols=36  Identities=22%  Similarity=0.434  Sum_probs=31.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEec--Ccchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWse  320 (323)
                      .+.++++|+++++.||||..||.|.|-.-.  .+||-.
T Consensus         4 ~~~Alydy~a~~~~eLs~~~Gd~i~vl~~~~~~~gWw~   41 (69)
T 2ydl_A            4 YCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWE   41 (69)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEESCCSSTTEEE
T ss_pred             EEEEcccCCCCCCCccccCCCCEEEEEEcCCCCCCEEE
Confidence            367899999999999999999999998875  789953

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=97.19  E-value=0.00028  Score=49.52  Aligned_cols=36  Identities=17%  Similarity=0.317  Sum_probs=31.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec--Ccchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWs  319 (323)
                      -.+.++++|+++.+.||||..||.|.|-+-.  .+||-
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~   44 (64)
T 2jte_A            7 EYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWW   44 (64)
T ss_dssp             EEEEESSCBCCSSSSBCCBCTTCEEEEEESCSSSTTEE
T ss_pred             EEEEECccCCccCCCccCCCCCCEEEEEECCCCCCCEE
Confidence            4578999999999999999999999998764  67885

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=97.19  E-value=0.0003  Score=50.30  Aligned_cols=36  Identities=17%  Similarity=0.210  Sum_probs=32.0

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -..+.++|+|+++.+.||+|..||.|.|-.-. +||-
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   42 (68)
T 1wxt_A            7 GLKMQVLYEFEARNPRELTVVQGEKLEVLDHS-KRWW   42 (68)
T ss_dssp             CEEEEESSCBCCCSSSBCCBCTTCEEEEEECS-SSEE
T ss_pred             CeEEEECceECCCCcCcCCCCCCCEEEEEEcC-CCEE
Confidence            35689999999999999999999999998875 7885

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.18  E-value=0.00037  Score=52.41  Aligned_cols=42  Identities=24%  Similarity=0.194  Sum_probs=36.7

Q ss_pred             cchhheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          279 QKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       279 ~~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+..+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus        13 ~~~~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~   54 (90)
T 2yup_A           13 QVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYE   54 (90)
T ss_dssp             CGGGSEEEEECSCCCCCSSSBCCCCTTCEEEESSCCCSSEEE
T ss_pred             ccccceEEEEeecCCcCCcCcCCCCCCCEEEEEEEcCCCeEE
Confidence            445678899999999999999999999999998777889953

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.18  E-value=0.00036  Score=51.35  Aligned_cols=41  Identities=24%  Similarity=0.204  Sum_probs=35.0

Q ss_pred             cchhheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          279 QKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       279 ~~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .......+.++++|+++.+.||+|..||.|.|-+- .+||-.
T Consensus        13 ~~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~gW~~   53 (79)
T 1x6b_A           13 SKGDLPQVEITKAFFAKQADEVTLQQADVVLVLQQ-EDGWLY   53 (79)
T ss_dssp             CCSSCCEEEESSCCCCCSSSBCCCCTTEEEEEEEE-ETTEEE
T ss_pred             CCCCCCEEEECeeECCCCcCCcCCCCCCEEEEEEe-CCCEEE
Confidence            34456778999999999999999999999988777 889853

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.17  E-value=0.00032  Score=51.25  Aligned_cols=38  Identities=16%  Similarity=0.082  Sum_probs=33.7

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-..+.++++|+++.+.||+|..||.|.|-.-...||-
T Consensus         6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   43 (78)
T 2yuo_A            6 SGRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCW   43 (78)
T ss_dssp             CCEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             CceEEEECccCCCCCCCCccCCCCCEEEEEEecCCCEE
Confidence            34568999999999999999999999999887788884

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.17  E-value=0.00025  Score=50.70  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=32.7

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (68)
T 2dmo_A            9 AHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWAT   44 (68)
T ss_dssp             EEEECSSCCCCSSSSCCCCTTCEEEECEECSSSCEE
T ss_pred             EEEECcCCCcCCcCCCCCCCCCEEEEEEeCCCCEEE
Confidence            478999999999999999999999998888899953

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.17  E-value=0.00055  Score=50.22  Aligned_cols=37  Identities=22%  Similarity=0.277  Sum_probs=33.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.+.++++|+++.+.||+|..||.|.|-.-...||-.
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   54 (79)
T 1x69_A           18 ITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWR   54 (79)
T ss_dssp             CCEEESSCCCCSSSSBCCCCTTCEEEEEEECSSSEEE
T ss_pred             eEEEECccCCCCCCCCcCcCCCCEEEEeEecCCCeEE
Confidence            5589999999999999999999999988888889853

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=97.17  E-value=0.00031  Score=48.73  Aligned_cols=35  Identities=20%  Similarity=0.290  Sum_probs=31.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEec--Ccchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWs  319 (323)
                      .+.++++|.++.+.||||..||.|.|-+-.  .+||-
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww   41 (60)
T 1oot_A            5 KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWW   41 (60)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEE
T ss_pred             EEEECccCCcCCcCEeeEcCCCEEEEEEeCCCCCCeE
Confidence            468999999999999999999999998775  78885

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.16  E-value=0.00022  Score=50.97  Aligned_cols=37  Identities=19%  Similarity=0.130  Sum_probs=33.3

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -.+.++++|.++.+.||+|..||.|.|-.....||-.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   45 (70)
T 2ega_A            9 EQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWF   45 (70)
T ss_dssp             BCEECCSCCCCCSSSSCCCCTTCBCEEEEECTTSEEE
T ss_pred             cEEEECceECCCCCCcccCCCCCEEEEEEccCCCeEE
Confidence            3478999999999999999999999999888899953

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.16  E-value=0.00029  Score=50.86  Aligned_cols=38  Identities=16%  Similarity=0.145  Sum_probs=33.6

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-+.+.++++|.++.+.||+|..||.|.|-+-...||-
T Consensus         8 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   45 (72)
T 2dl8_A            8 EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWW   45 (72)
T ss_dssp             SCEEEEESSCBCCSSSSBCCBCTTCEEEEEEEEETTEE
T ss_pred             CCEEEEECccCCcCCCCEeccCCCCEEEEEeecCCCEE
Confidence            34678999999999999999999999999887778884

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=97.15  E-value=0.00031  Score=50.05  Aligned_cols=36  Identities=22%  Similarity=0.161  Sum_probs=32.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec-Ccchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC-YISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs-~~GWs  319 (323)
                      ..+.++++|.++.+.||+|..||.|.|-.-. ..||-
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww   43 (71)
T 2jt4_A            7 KRGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWW   43 (71)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEESSSCSSEE
T ss_pred             CEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCE
Confidence            4678999999999999999999999998876 88984

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=97.15  E-value=0.00023  Score=51.95  Aligned_cols=38  Identities=16%  Similarity=0.133  Sum_probs=34.2

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ....+.++++|+++.+.||+|..||.|.|-+....||-
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww   46 (76)
T 2ed1_A            9 KVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWW   46 (76)
T ss_dssp             CCEEEEESSCCCCSSSSBCCCCSSCEEEESSCCSSSEE
T ss_pred             CCeEEEECccCCCCCcCCcCcCCCCEEEEEEecCCCEE
Confidence            45678999999999999999999999999887788884

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=97.15  E-value=0.00011  Score=53.82  Aligned_cols=38  Identities=16%  Similarity=0.148  Sum_probs=33.7

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-.++.++++|+++.++||||..||.|.|-.-...||-
T Consensus        19 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   56 (77)
T 1awj_A           19 EETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWW   56 (77)
T ss_dssp             SSSCCCCCCCBCCCCTTSCCBCSSSCCSCCCTTSSSBC
T ss_pred             CceEEEECccCCCCCcCCcCCCCCCEEEEEEecCCCCE
Confidence            44678999999999999999999999999887778885

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=97.14  E-value=0.0003  Score=51.60  Aligned_cols=36  Identities=28%  Similarity=0.318  Sum_probs=32.6

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-.-..+||-.
T Consensus         7 ~~~Alydy~a~~~~eLs~~~Gd~i~v~~~~~~gWw~   42 (73)
T 2lcs_A            7 RAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLV   42 (73)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEEETTTEEE
T ss_pred             EEEECccCCCCCCCccCCcCCCEEEEEEEcCCCEEE
Confidence            468999999999999999999999998888899953

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.14  E-value=0.00039  Score=49.59  Aligned_cols=37  Identities=16%  Similarity=0.244  Sum_probs=33.2

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-++.++++|.++.+.||+|..||.|.|-+-..+||-
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   43 (68)
T 1x2k_A            7 GKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWW   43 (68)
T ss_dssp             SEEEEESSCCCCCSTTBCCCCSSCEEEEEECSCSSEE
T ss_pred             cEEEEECceECCCCCCcccCCCCCEEEEEEcCCCCEE
Confidence            3567899999999999999999999999887888985

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=97.14  E-value=0.00027  Score=49.16  Aligned_cols=36  Identities=19%  Similarity=0.319  Sum_probs=32.4

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|+++.+.||+|..||.|.|-.-...||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~   43 (65)
T 3u23_A            8 RQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWW   43 (65)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEEEEETTEE
T ss_pred             eEEEEeeeeCCCCcCCcCCCCCCEEEEEEecCCCEE
Confidence            357899999999999999999999999888888985

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=97.14  E-value=0.00032  Score=50.48  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=32.0

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec--Ccchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWs  319 (323)
                      -.+.++++|.++.+.||+|..||.|.|-.-.  ..||-
T Consensus        10 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~   47 (73)
T 2k9g_A           10 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWW   47 (73)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSTTEE
T ss_pred             cEEEECccCCCCCCCeeeECCCCEEEEEECCCCCCCEE
Confidence            3578899999999999999999999998875  78885

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.13  E-value=0.00027  Score=51.06  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=33.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-+-..+||-.
T Consensus         9 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (77)
T 2d8j_A            9 YFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWL   44 (77)
T ss_dssp             EEEESSCBCCSSSSBCCBCTTCCEEEEECCSSSEEE
T ss_pred             EEEEccCCCCCCCCccCCCCCCEEEEEECCCCCeEE
Confidence            678999999999999999999999999888899953

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=97.13  E-value=0.00037  Score=49.70  Aligned_cols=35  Identities=26%  Similarity=0.224  Sum_probs=32.6

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|+++.+.||+|..||.|.|-.-..+||-
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   44 (69)
T 2dil_A           10 EYRALYDYTAQNPDELDLSAGDILEVILEGEDGWW   44 (69)
T ss_dssp             EEECCSCBCCSSSSSCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEECccCCccCcCccCCCCCCEEEEEECCCCCEE
Confidence            57899999999999999999999999988889995

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.12  E-value=0.00018  Score=51.32  Aligned_cols=38  Identities=13%  Similarity=0.063  Sum_probs=33.5

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -+.+.++++|+++.+.||+|..||.|.|-.-..+||-.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (69)
T 2eqi_A            7 GRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWK   44 (69)
T ss_dssp             CCEEEESSCBCCCSSSCCCBCTTCEEESCCCCSSSCEE
T ss_pred             CcEEEECeeECCCCcCccCCCCCCEEEEEEcCCCCeEE
Confidence            35689999999999999999999999998777889853

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=97.12  E-value=0.00037  Score=49.57  Aligned_cols=35  Identities=23%  Similarity=0.201  Sum_probs=32.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|++..++||+|..||.|.|-.-...||-
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   42 (69)
T 4esr_A            8 TVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWW   42 (69)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEECSSSEE
T ss_pred             EEEECccCCCCCcCcCCCCCCCEEEEEEecCCCeE
Confidence            56789999999999999999999999888888884

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=97.12  E-value=0.00028  Score=53.42  Aligned_cols=41  Identities=24%  Similarity=0.250  Sum_probs=35.4

Q ss_pred             cchhheeeeeccCCCcCCccceeeecCCEEEEEEecC----cchh
Q 020634          279 QKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCY----ISFL  319 (323)
Q Consensus       279 ~~~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~----~GWs  319 (323)
                      .....+.+.++++|.++.+.||+|..||.|.|-....    +||-
T Consensus        13 ~~~~~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~~~gWw   57 (93)
T 1wxu_A           13 GEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWL   57 (93)
T ss_dssp             TSSCBBCEEESSCBCCSSSSBCCBCSSCBCEECCTTTSCSCSSCE
T ss_pred             CCCCCEEEEECccCCCCCCCccCcCCCCEEEEEECCCCCCCCCcE
Confidence            3445688999999999999999999999999987766    6884

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=97.12  E-value=0.00034  Score=48.92  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=32.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|.++.+.||+|..||.|.|-.-...||-
T Consensus        10 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   45 (65)
T 3ulr_B           10 ITAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWW   45 (65)
T ss_dssp             SCEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             eEEEEEeeECCCCcCEeeEecCCEEEEEEecCCCEE
Confidence            458899999999999999999999999888888995

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.12  E-value=0.00019  Score=52.27  Aligned_cols=39  Identities=26%  Similarity=0.319  Sum_probs=34.6

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..+.+.++++|+++.+.||+|..||.|.|-+....||-.
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   47 (76)
T 1ujy_A            9 HQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWE   47 (76)
T ss_dssp             CCEEEECCSCBCCSSTTSCCBCSSCCEEESSCCSSSCEE
T ss_pred             CCEEEEECccCCcCCCCcccCCCCCEEEEEEecCCCEEE
Confidence            346689999999999999999999999998888899953

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.12  E-value=0.0004  Score=51.20  Aligned_cols=39  Identities=21%  Similarity=0.278  Sum_probs=35.0

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   47 (81)
T 2ysq_A            9 SIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWW   47 (81)
T ss_dssp             CCEEEEESSCCCCSSSSSCCCCTTCEEEEEECCSSSEEE
T ss_pred             CceEEEEeeeECCCCCCcCCCCCCCEEEEEEEcCcCEEE
Confidence            557789999999999999999999999998888899953

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=97.11  E-value=0.00037  Score=48.13  Aligned_cols=35  Identities=17%  Similarity=0.284  Sum_probs=32.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||+|..||.|.|-.-...||-
T Consensus         8 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   42 (62)
T 3ngp_A            8 LVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWW   42 (62)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEECcCCCCCCCCCccCCCCCEEEEeEecCCCeE
Confidence            57889999999999999999999999888888884

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.10  E-value=0.00043  Score=50.69  Aligned_cols=37  Identities=27%  Similarity=0.364  Sum_probs=33.4

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .++.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (79)
T 2yun_A            8 RLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWF   44 (79)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSCEE
T ss_pred             CEEEECccCCcCCCCCcCCCCCCEEEEEEcCCCCEEE
Confidence            4578999999999999999999999999888889953

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.10  E-value=0.00038  Score=49.78  Aligned_cols=36  Identities=14%  Similarity=0.252  Sum_probs=32.5

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (68)
T 2dl4_A            9 TYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWK   44 (68)
T ss_dssp             EEEESSCCCCSSTTBCCCCTTCEEEEEECCCSSEEE
T ss_pred             EEEEeeeECCCCcCCcCCCCCCEEEEEEeCCCCEEE
Confidence            467999999999999999999999999888889953

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=97.10  E-value=0.00039  Score=50.36  Aligned_cols=36  Identities=14%  Similarity=0.265  Sum_probs=32.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||||..||.|.|-.-...||-.
T Consensus         5 ~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~   40 (68)
T 2ew3_A            5 CCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYE   40 (68)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEESSSSEEE
T ss_pred             EEEEeeeECCCCCCccCCCCCCEEEEEEecCCCEEE
Confidence            367899999999999999999999998888889953

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=97.09  E-value=0.00038  Score=49.89  Aligned_cols=36  Identities=19%  Similarity=0.297  Sum_probs=32.5

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|+++.+.|||+..||.|.|-.-..+||-
T Consensus         4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww   39 (65)
T 1b07_A            4 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWW   39 (65)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEE
T ss_pred             eEEEECCcCCCCCCCccCCcCCCEEEEEEecCCCeE
Confidence            357899999999999999999999999888888884

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=97.09  E-value=0.00041  Score=49.23  Aligned_cols=37  Identities=24%  Similarity=0.278  Sum_probs=33.4

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -..+.++++|.++.+.||+|..||.|.|-+-...||-
T Consensus        13 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~   49 (72)
T 4glm_A           13 LTYGVALYRFQALEPNELDFEVGDKIRILATLEDGWL   49 (72)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEECSTTEE
T ss_pred             CeEEEECccCCCCCCCcCCCCCCCEEEEEEccCCCEE
Confidence            3568899999999999999999999999888889995

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.09  E-value=0.0004  Score=50.97  Aligned_cols=36  Identities=28%  Similarity=0.240  Sum_probs=33.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-+...+||-.
T Consensus        19 ~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~gWw~   54 (78)
T 2ed0_A           19 KVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYE   54 (78)
T ss_dssp             EEEECSCBCCSSTTBCCBCSSCEEEEEEECSSSEEE
T ss_pred             EEEECccCCccCcCcccccCCCEEEEEEeCCCCEEE
Confidence            578999999999999999999999999888999953

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=97.08  E-value=0.00033  Score=50.02  Aligned_cols=38  Identities=18%  Similarity=0.374  Sum_probs=33.6

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEe--cCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKV--CYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqV--s~~GWse  320 (323)
                      ...+.++++|.+..++||||..||.|.|-.-  ...||-.
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~   45 (71)
T 1u5s_A            6 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWK   45 (71)
T ss_dssp             SSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEE
T ss_pred             cEEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCCEE
Confidence            3568999999999999999999999999887  6889853

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=97.08  E-value=0.00026  Score=50.87  Aligned_cols=38  Identities=24%  Similarity=0.191  Sum_probs=32.9

Q ss_pred             hheeeeeccCCCc-CCccceeeecCCEEEEEEe-cCcchh
Q 020634          282 VYFLAEAIHPFTA-ASEKELSLGVGDYVVVRKV-CYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~a-ese~ELsLsvGDyVVVRqV-s~~GWs  319 (323)
                      ....+.++++|.| +.+.||+|..||.|.|-.- ..+||-
T Consensus         6 ~~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~gWw   45 (72)
T 1spk_A            6 SGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWL   45 (72)
T ss_dssp             CSCEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEE
T ss_pred             CceEEEEeeeeCCCCCCCCCcCCCCCEEEEeEccCCCCcE
Confidence            4467889999997 9999999999999999765 778885

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=97.07  E-value=0.00066  Score=50.93  Aligned_cols=35  Identities=14%  Similarity=0.188  Sum_probs=31.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|.++.++||+|..||.|.|-.- .+||-
T Consensus        32 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww   66 (86)
T 2jxb_A           32 VIVIAKWDYTAQQDQELDIKKNERLWLLDD-SKTWW   66 (86)
T ss_dssp             EEEEESSCCCCCSSSBCCCCTTEEEEEEEC-CSSEE
T ss_pred             eEEEECccCCCCCCCEeccCCCCEEEEEec-CCCeE
Confidence            567899999999999999999999999886 56885

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=97.06  E-value=0.0003  Score=50.00  Aligned_cols=36  Identities=25%  Similarity=0.349  Sum_probs=32.2

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ++.++++|.++.+.||+|..||.|.|-+-...||-.
T Consensus         9 ~~~al~~y~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (70)
T 2cuc_A            9 MFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLK   44 (70)
T ss_dssp             CEECCSCBCCCSTTBCCBCTTCEEEEEEEEETTEEE
T ss_pred             EEEECeeECcCCCCcCCCCCCCEEEEEEecCCCeEE
Confidence            468999999999999999999999998887889853

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.06  E-value=0.00042  Score=49.50  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=31.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec--Ccchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWs  319 (323)
                      -.+.++++|.++.+.||+|..||.|.|-.-.  ..||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~   45 (70)
T 2da9_A            8 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWW   45 (70)
T ss_dssp             EEEEECSCCCCSSTTBCCCCTTEEEEEEECCCSSTTEE
T ss_pred             cEEEECcCCCCCCcCEeeEcCCCEEEEEECCCCCCCeE
Confidence            4678999999999999999999999997764  78885

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=97.06  E-value=0.00047  Score=49.32  Aligned_cols=37  Identities=19%  Similarity=0.196  Sum_probs=32.4

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -.++.++++|.++.+.||+|..||.|.|-.-...||-
T Consensus        15 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   51 (73)
T 3h0h_A           15 VTLFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWW   51 (73)
T ss_dssp             TCEEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEE
T ss_pred             CEEEEECccCCCCCCCcceEeCCCEEEEEEecCCCeE
Confidence            3456789999999999999999999988887788884

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=97.05  E-value=0.00045  Score=48.56  Aligned_cols=37  Identities=16%  Similarity=0.225  Sum_probs=32.7

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ...+.++++|+++.+.|||+..||.|.|-.-...||-
T Consensus        21 ~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~~~Ww   57 (62)
T 1g2b_A           21 KELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWW   57 (62)
T ss_dssp             SCEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             ceEEEEeeeECCCCCCccCCCCCCEEEEEEecCCCEE
Confidence            4568899999999999999999999988777778884

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=97.04  E-value=0.00045  Score=49.47  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=32.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEE-ecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRK-VCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRq-Vs~~GWse  320 (323)
                      .+.++++|+++.++||||..||.|.|-. ...+||-.
T Consensus        13 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~   49 (71)
T 1csk_A           13 ECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYK   49 (71)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEECSSTTEEE
T ss_pred             EEEEceeECcCCCCcCCCCCCCEEEEeECCCCCCCEE
Confidence            4789999999999999999999998877 67789853

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.04  E-value=0.00067  Score=49.74  Aligned_cols=38  Identities=16%  Similarity=0.234  Sum_probs=33.0

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecC--cchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCY--ISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~--~GWse  320 (323)
                      -..+.++++|+++.+.||+|..||.|.|-+-..  .||-.
T Consensus        17 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~   56 (80)
T 2d8h_A           17 PIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWE   56 (80)
T ss_dssp             CEEEECSSCEECSSTTBCEECTTCEEEEEECCSCSSSEEE
T ss_pred             CEEEEECccCCcCCCCeeeEcCCCEEEEeECcCCCCCeEE
Confidence            356899999999999999999999999987764  88853

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=97.03  E-value=0.00048  Score=48.72  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=32.2

Q ss_pred             eeeeccCCCc-CCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTA-ASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~a-ese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ...++++|.+ +.+.||+|..||.|.|-+-..+||-.
T Consensus         7 ~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~gW~~   43 (65)
T 2j05_A            7 RVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMW   43 (65)
T ss_dssp             EEEESSCBCCCTTSSBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEEEccccCCCCCCCcCcCCCCCEEEEeEecCCCEEE
Confidence            4789999999 99999999999999998878889953

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=97.02  E-value=0.00041  Score=51.27  Aligned_cols=36  Identities=11%  Similarity=0.157  Sum_probs=32.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcc-hh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYIS-FL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~G-Ws  319 (323)
                      ..+.++++|+++.+.||+|..||.|.|-+-...| |-
T Consensus        11 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~gWw   47 (80)
T 2i0n_A           11 KYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWF   47 (80)
T ss_dssp             CEEEESSCBCCCSSSSCCBCSSEEEEEEEESSSSSEE
T ss_pred             eEEEECCCCCcCCCCCcCCCCCCEEEEEEecCCCCEE
Confidence            5678999999999999999999999998877666 85

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=97.02  E-value=0.00037  Score=55.88  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=34.5

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..+++.++++|+++.+.||||..||.|.|-.-...||-.
T Consensus         2 ~~~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~~~~Ww~   40 (120)
T 2kym_A            2 APLFAVTLYEFKAERDDELDVSPGENLSICAHYDYEWFI   40 (120)
T ss_dssp             CCCEEEECSCBCCCSTTCCCBCTTCEEEEEEEETTTEEE
T ss_pred             CCEEEEEcccCCCCCCCccCCCCCCEEEEEEecCCCEEE
Confidence            346789999999999999999999999998878889853

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=97.02  E-value=0.00052  Score=48.91  Aligned_cols=35  Identities=29%  Similarity=0.278  Sum_probs=31.5

Q ss_pred             eeeccCCC-cCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFT-AASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~-aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++++|+ ++.+.||+|..||.|.|-+-..+||-.
T Consensus         5 ~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   40 (69)
T 1ruw_A            5 FEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSL   40 (69)
T ss_dssp             EEESSCBCCCSCTTBCCBCTTCEEEEEEECTTSEEE
T ss_pred             EEEccccCCCCCCCcccCCCCCEEEEEEecCCCeEE
Confidence            57899996 999999999999999998888899953

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.02  E-value=0.00022  Score=51.72  Aligned_cols=38  Identities=21%  Similarity=0.176  Sum_probs=32.0

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEE-EEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVV-RKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVV-RqVs~~GWs  319 (323)
                      ....+.++++|+++.+.||+|..||.|.| .+....||-
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww   47 (72)
T 1ugv_A            9 PFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWL   47 (72)
T ss_dssp             SCCCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEE
T ss_pred             CccEEEEccccCCcCCCEeCCcCCCEEEEEEecCCCCeE
Confidence            45678999999999999999999999964 445677885

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.01  E-value=0.00047  Score=50.59  Aligned_cols=35  Identities=17%  Similarity=0.189  Sum_probs=31.4

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecC----cchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCY----ISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~----~GWs  319 (323)
                      ++.++++|+++.+.||+|..||.|.|-+...    .||-
T Consensus        15 ~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww   53 (79)
T 1uhc_A           15 VYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWW   53 (79)
T ss_dssp             CEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEE
T ss_pred             EEEECccCCCCCCCccCCCCCCEEEEEECCCCCCCCCeE
Confidence            5679999999999999999999999988765    8884

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.01  E-value=0.00056  Score=48.59  Aligned_cols=36  Identities=19%  Similarity=0.231  Sum_probs=32.5

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|.++.+.||+|..||.|.|-+-...||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   43 (68)
T 1x2p_A            8 EEFVAIADYAATDETQLSFLRGEKILILRQTTADWW   43 (68)
T ss_dssp             CEEEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEE
T ss_pred             CEEEECceECCCCcCCcCCCCCCEEEEEEcCCCCEE
Confidence            347899999999999999999999999888888985

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=97.01  E-value=0.00024  Score=51.22  Aligned_cols=36  Identities=19%  Similarity=0.347  Sum_probs=32.2

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|.+++++||||..||.|.|-+-..+||-.
T Consensus         3 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~gWw~   38 (65)
T 2fei_A            3 QCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWS   38 (65)
T ss_dssp             EEECSSCCCCCSTTBCCCCTTCEEECCCCSSSSEEE
T ss_pred             EEEECccCCcCCcCccCCCCCCEEEEEEecCCCEEE
Confidence            468999999999999999999999998878889953

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=97.00  E-value=0.00054  Score=49.57  Aligned_cols=37  Identities=16%  Similarity=0.258  Sum_probs=33.0

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -.+.++++|+++.+.||||..||.|.|-+-..+||-.
T Consensus        14 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   50 (73)
T 3c0c_A           14 PSCKALYDFEPENDGELGFREGDLITLTNQIDENWYE   50 (73)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSSEEE
T ss_pred             eEEEECccCCCCCCCCccCcCCCEEEEEEecCCCEEE
Confidence            3578999999999999999999999998888899853

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=97.00  E-value=0.00051  Score=48.01  Aligned_cols=35  Identities=14%  Similarity=0.297  Sum_probs=31.0

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|.++.++||+|..||.|.|-.-+ +||-
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   41 (62)
T 2iim_A            7 NLVIALHSYEPSHDGDLGFEKGEQLRILEQS-GEWW   41 (62)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECC-SSEE
T ss_pred             cEEEEcccCCCCCCCCcCCCCCCEEEEEEcC-CCEE
Confidence            3578999999999999999999999998876 4884

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=97.00  E-value=0.00027  Score=49.15  Aligned_cols=34  Identities=21%  Similarity=0.170  Sum_probs=30.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ++.++++|.++.+.||||..||.|.|-.- .+||-
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww   36 (60)
T 1i07_A            3 YAKSKYDFVARNSSELSVMKDDVLEILDD-RRQWW   36 (60)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEECGG-GCCEE
T ss_pred             EEEECccCCCCCCCcccCCCCCEEEEEEc-CCCeE
Confidence            46899999999999999999999999776 67774

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.00  E-value=0.00066  Score=51.94  Aligned_cols=41  Identities=20%  Similarity=0.200  Sum_probs=34.6

Q ss_pred             chhheeeeeccCCCcC--------CccceeeecCCEEEEE-EecCcchhh
Q 020634          280 KAVYFLAEAIHPFTAA--------SEKELSLGVGDYVVVR-KVCYISFLR  320 (323)
Q Consensus       280 ~~~yFlaev~hpf~ae--------se~ELsLsvGDyVVVR-qVs~~GWse  320 (323)
                      +....++.++|+|++.        .+.||+|..||.|.|- +...+||-.
T Consensus        14 ~~~~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~   63 (97)
T 2csq_A           14 ELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYR   63 (97)
T ss_dssp             CCCCEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEE
T ss_pred             CCCceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEE
Confidence            3345678999999999        7999999999999987 677889953

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=96.99  E-value=0.00049  Score=51.17  Aligned_cols=35  Identities=23%  Similarity=0.293  Sum_probs=32.0

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ++.++++|+++.++||||..||.|.|-+-..+||-
T Consensus         7 ~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww   41 (79)
T 3cqt_A            7 LFEALYDYEARTEDDLSFHKGEKFQILNSSEGDWW   41 (79)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECTTSSEE
T ss_pred             EEEECccCCCCCcCcCCCCCCCEEEEEEecCCCeE
Confidence            46899999999999999999999999888888995

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=96.99  E-value=0.00068  Score=49.57  Aligned_cols=37  Identities=19%  Similarity=0.107  Sum_probs=32.7

Q ss_pred             eeeeeccCCCcC--CccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAA--SEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~ae--se~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -.+.++++|++.  .+.||+|..||.|.|-.-...||-+
T Consensus        10 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~   48 (73)
T 2ebp_A           10 GRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWM   48 (73)
T ss_dssp             EEEEECSCBCCCTTCCSBCCBCSSCEEEEEECCSSSCEE
T ss_pred             eEEEEeeccCCCCCCCCccCCCCCCEEEEEEeCCCCeEE
Confidence            468999999976  9999999999999998888899953

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.98  E-value=0.001  Score=49.89  Aligned_cols=39  Identities=28%  Similarity=0.248  Sum_probs=33.5

Q ss_pred             hheeeeeccCCC--cCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFT--AASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~--aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|.  ++.+.||+|..||.|.|-.-...||-+
T Consensus        15 ~~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~   55 (88)
T 2dbk_A           15 GPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWE   55 (88)
T ss_dssp             CCEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEECTTSCEE
T ss_pred             CCEEEEEcccccCCCCCCCcccCCCCCEEEEEEecCCCEEE
Confidence            346789999999  559999999999999998888889953

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=96.97  E-value=0.00056  Score=48.93  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=31.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||+|..||.|.|-.-...||-
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   41 (73)
T 3thk_A            7 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWW   41 (73)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEECcCCCcCCCCccCCCCCCEEEEEECCCCCeE
Confidence            46789999999999999999999999888888884

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.97  E-value=0.00062  Score=48.61  Aligned_cols=36  Identities=22%  Similarity=0.209  Sum_probs=31.5

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEec-Ccchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVC-YISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs-~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-+-. ++||-.
T Consensus         9 ~~~alydy~~~~~~eLs~~~Gd~i~vl~~~~~~gW~~   45 (70)
T 2ct4_A            9 HCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTR   45 (70)
T ss_dssp             EEEESSCBCCCSTTCCCBCTTCEEEEEECCSSSCEEE
T ss_pred             EEEEcccCCCCCCCcCCCCCCCEEEEEeccCCCCeEE
Confidence            589999999999999999999999987765 678953

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=96.97  E-value=0.00033  Score=49.91  Aligned_cols=36  Identities=17%  Similarity=0.173  Sum_probs=32.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|+++.+.||+|..||.|.|-+-...||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   43 (70)
T 2ecz_A            8 GEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWY   43 (70)
T ss_dssp             BCEEESSCCCCCSTTBCCCCTTCBCEEEEEEETTEE
T ss_pred             CEEEECccCCCCCcCCcCCCCCCEEEEEEecCCCeE
Confidence            457899999999999999999999998877778885

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.95  E-value=0.00073  Score=51.76  Aligned_cols=40  Identities=25%  Similarity=0.286  Sum_probs=34.5

Q ss_pred             hhheeeeeccCCCcCC------ccceeeecCCEEEEE-EecCcchhh
Q 020634          281 AVYFLAEAIHPFTAAS------EKELSLGVGDYVVVR-KVCYISFLR  320 (323)
Q Consensus       281 ~~yFlaev~hpf~aes------e~ELsLsvGDyVVVR-qVs~~GWse  320 (323)
                      ....++.++++|+++.      +.||+|..||.|.|- +....||-+
T Consensus        15 ~~~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~   61 (96)
T 1wie_A           15 GKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYE   61 (96)
T ss_dssp             SCEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCE
T ss_pred             CCCcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEecCCCCEEE
Confidence            3456788999999999      999999999999998 778889953

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=96.95  E-value=0.0006  Score=48.86  Aligned_cols=35  Identities=20%  Similarity=0.089  Sum_probs=31.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|+++.+.||+|..||.|.|-+-+ .||-
T Consensus         9 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   43 (68)
T 2k2m_A            9 KWVLCNYDFQARNSSELSVKQRDVLEVLDDS-RKWW   43 (68)
T ss_dssp             CEEEESSCBCCCSSSBCCBCTTCEEEEEECS-SSEE
T ss_pred             EEEEECccCCCCCCCcccCCCCCEEEEEEcC-CCeE
Confidence            4678999999999999999999999998876 6774

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=96.95  E-value=0.00026  Score=50.35  Aligned_cols=36  Identities=19%  Similarity=0.248  Sum_probs=32.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|+++.+.||+|..||.|.|-.-...||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   43 (68)
T 1wi7_A            8 RRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWW   43 (68)
T ss_dssp             CCEEESSCBCCSSTTBCCBCTTCEECCCEEEETTEE
T ss_pred             CEEEECccCCcCCCCCccCcCCCEEEEEEcCCCCeE
Confidence            457899999999999999999999998777778885

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=96.93  E-value=0.0005  Score=49.76  Aligned_cols=34  Identities=18%  Similarity=0.359  Sum_probs=30.9

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -+.++++|.+ ++.||||..||.|.|-+-.+.||-
T Consensus         2 ~a~alydy~~-~~~eLs~~~Gd~i~v~~~~~~~Ww   35 (73)
T 2kxd_A            2 GAPPLPPYSA-GGREVTMKKGDILTLLNSTNKDWW   35 (73)
T ss_dssp             CCCCCCSSCC-CSCCCCBCTTCEEEEEECCSSSEE
T ss_pred             eEEEeeeeCC-CCCEeeEcCCCEEEEEEecCCCEE
Confidence            3789999999 899999999999999988888984

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=96.93  E-value=0.0014  Score=48.26  Aligned_cols=37  Identities=22%  Similarity=0.268  Sum_probs=32.4

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-..+.++++|.++.++||+|..||.|.|-+-. .||-
T Consensus        24 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   60 (86)
T 2oi3_A           24 EDIIVVALYDYEAIHHEDLSFQKGDQMVVLEES-GEWW   60 (86)
T ss_dssp             TSEEEEESSCCCCSSSSCCCCCTTCEEEEEEES-SSEE
T ss_pred             CCcEEEECccCCCCCCCcCcCCCCCEEEEEEcC-CCeE
Confidence            345789999999999999999999999997777 6885

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.92  E-value=0.00066  Score=50.17  Aligned_cols=35  Identities=14%  Similarity=0.099  Sum_probs=31.9

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +..++++|.++.+.||+|..||.|.|-+-..+||-
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw   44 (80)
T 2ekh_A           10 SYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWW   44 (80)
T ss_dssp             EEEECSCBCCSSTTSCCBCTTCEEEEEEECTTSEE
T ss_pred             EEEECCCCCCCCCCccCcCCCCEEEEEEeCCCCeE
Confidence            45789999999999999999999999888889995

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.92  E-value=0.00081  Score=48.84  Aligned_cols=38  Identities=21%  Similarity=0.247  Sum_probs=33.4

Q ss_pred             heeeeeccCCCcC-CccceeeecCCEEEEEEec-Ccchhh
Q 020634          283 YFLAEAIHPFTAA-SEKELSLGVGDYVVVRKVC-YISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~ae-se~ELsLsvGDyVVVRqVs-~~GWse  320 (323)
                      -..+.++++|.++ .+.||+|..||.|.|-.-. ..||-.
T Consensus         9 ~~~~~al~dy~~~~~~~eLs~~~Gd~i~v~~~~~~~gW~~   48 (77)
T 2enm_A            9 ATKARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLE   48 (77)
T ss_dssp             CEEEEESSCCCCCTTSSBCCCCTTCEEEEEESCCSSSEEE
T ss_pred             CcEEEECccCCCCCCCCeecCCCCCEEEEeEccCCCCeEE
Confidence            4668999999999 9999999999999998875 689953

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=96.91  E-value=0.00038  Score=49.34  Aligned_cols=36  Identities=19%  Similarity=0.135  Sum_probs=32.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..+.++++|.+..+.||+|..||.|.|-.-..+||-
T Consensus        11 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   46 (68)
T 1s1n_A           11 EEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWW   46 (68)
T ss_dssp             EEEEECSCBCCSSSSCCCBCSSEEEEECSCCSSSEE
T ss_pred             CEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCeE
Confidence            446699999999999999999999999887888995

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=96.91  E-value=0.00036  Score=49.47  Aligned_cols=37  Identities=16%  Similarity=0.240  Sum_probs=32.8

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -.+.++++|.++.+.||+|..||.|.|-+-...||-.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   45 (67)
T 1aww_A            9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWR   45 (67)
T ss_dssp             CEEEBSSCCCCSSSSSCCCCSSCEEECCCCCSSSEEC
T ss_pred             eEEEECccCCCCCCCCccCCCCCEEEEEEccCCCcEE
Confidence            3578999999999999999999999998877888853

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=96.89  E-value=0.00047  Score=52.08  Aligned_cols=39  Identities=15%  Similarity=0.118  Sum_probs=34.4

Q ss_pred             hhheeeeeccCC-CcCCccceeeecCCEEEEEEecCcchh
Q 020634          281 AVYFLAEAIHPF-TAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       281 ~~yFlaev~hpf-~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ...+.+.++++| .++.+.||+|..||.|.|-+...+||-
T Consensus        16 ~~~~~~~Alydy~~a~~~~eLsf~~GDiI~V~~~~~~gWw   55 (83)
T 2ke9_A           16 RGSLKVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRW   55 (83)
T ss_dssp             -CCEEEEESSCBCCCSCTTBCCBCTTCEEEESCSSCSSCE
T ss_pred             CCCeEEEEccccCCCCCCCcccccCCCEEEEEEecCCCeE
Confidence            456789999999 899999999999999999888888884

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=96.89  E-value=0.00053  Score=49.19  Aligned_cols=34  Identities=26%  Similarity=0.357  Sum_probs=30.5

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ++.++++|+++.+.||+|..||.|.|-.-. .||-
T Consensus        13 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~W~   46 (74)
T 2m0y_A           13 YGVAFYNYDARGADELSLQIGDTVHILETY-EGWY   46 (74)
T ss_dssp             CEEECSEECCCSSSBCCEETTEEEEEEEBS-SSCE
T ss_pred             EEEEceeeCCCCcCcccCCCCCEEEEEEcC-CCeE
Confidence            467899999999999999999999998876 7885

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.88  E-value=0.00075  Score=48.22  Aligned_cols=35  Identities=20%  Similarity=0.149  Sum_probs=30.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|+++.+.||+|..||.|.|-+-. .||-
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   42 (68)
T 1wxb_A            8 KYVKILYDFTARNANELSVLKDEVLEVLEDG-RQWW   42 (68)
T ss_dssp             CCEECSSCBCCSSSSBCCBCTTCEEEEEECS-SSEE
T ss_pred             EEEEECccCCCCCCCccCCCCCCEEEEEEcC-CCEE
Confidence            3678999999999999999999999998875 7774

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.88  E-value=0.00089  Score=48.54  Aligned_cols=37  Identities=19%  Similarity=0.254  Sum_probs=32.2

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-..+.++++|.++.+.||+|..||.|.|-+-. +||-
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   45 (74)
T 1j3t_A            9 ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQ-ENWW   45 (74)
T ss_dssp             CCCEEEESSCBCCCSTTBCCBCTTCEEEEEEEC-SSEE
T ss_pred             CCeEEEECCCCCCCCCCccCCCCCCEEEEEecC-CCEE
Confidence            346689999999999999999999999998774 7885

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.85  E-value=0.00062  Score=48.60  Aligned_cols=37  Identities=19%  Similarity=0.213  Sum_probs=32.8

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -...++++|.++.+.||+|..||.|.|-+-..+||-.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   45 (71)
T 2dnu_A            9 EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWY   45 (71)
T ss_dssp             EEEECSSCBCCSSTTBCCBCTTCEEEECCCCSSSEEE
T ss_pred             CEEEECCccCCCCCCCCcCCCCCEEEEeECCCCCeEE
Confidence            3568999999999999999999999998887889953

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=96.84  E-value=0.00045  Score=49.88  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=32.4

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.+.||+|..||.|.|-+-...||-.
T Consensus         9 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   44 (73)
T 2dbm_A            9 CCRALYDFEPENEGELGFKEGDIITLTNQIDENWYE   44 (73)
T ss_dssp             EEEESSCBCCCSTTCCCBCTTCEEECCBCSSSSEEE
T ss_pred             EEEEccccCCCCCCCccCCCCCEEEEEEecCCCEEE
Confidence            478999999999999999999999998877889853

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=96.84  E-value=0.00094  Score=53.50  Aligned_cols=40  Identities=33%  Similarity=0.397  Sum_probs=35.3

Q ss_pred             hhheeeeeccCCCcCCccceeeecCCEEEEEE-----ecCcchhh
Q 020634          281 AVYFLAEAIHPFTAASEKELSLGVGDYVVVRK-----VCYISFLR  320 (323)
Q Consensus       281 ~~yFlaev~hpf~aese~ELsLsvGDyVVVRq-----Vs~~GWse  320 (323)
                      ...+.+.++++|+++.+.||+|..||.|.|-.     ....||-.
T Consensus        42 ~~~~~~~Alydy~a~~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~   86 (115)
T 1bb9_A           42 GFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLM   86 (115)
T ss_dssp             TCCEEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEE
T ss_pred             CcceEEEECCccCCCCCCccCcCCCCEEEEeeccCCcccCCCeEE
Confidence            34577999999999999999999999999988     78889953

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.83  E-value=0.00078  Score=50.71  Aligned_cols=37  Identities=32%  Similarity=0.365  Sum_probs=33.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.+.++++|+++.+.||+|..||.|.|-+....||-.
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~gWw~   54 (88)
T 2cub_A           18 MPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWR   54 (88)
T ss_dssp             EEEEESSCCCCCSTTBCCCCTTEEEEEEEECTTSEEE
T ss_pred             CEEEEccccCCCCCCCcCCCCCCEEEEEEccCCCeEE
Confidence            5578999999999999999999999999988899953

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.83  E-value=0.00077  Score=49.65  Aligned_cols=38  Identities=26%  Similarity=0.234  Sum_probs=33.4

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEec--Ccchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWs  319 (323)
                      .-..+.++++|+++.+.||+|..||.|.|-...  .+||-
T Consensus        16 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww   55 (81)
T 1x43_A           16 NNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWL   55 (81)
T ss_dssp             CCEEEEESSCCCCSSTTBCCCCTTCEEEEECCTTCCTTEE
T ss_pred             CCeEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCCCcE
Confidence            346789999999999999999999999998874  58884

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=96.82  E-value=0.0017  Score=49.87  Aligned_cols=38  Identities=13%  Similarity=0.115  Sum_probs=34.0

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ....+.++++|+++.+.||+|..||.|.|-+-...||-
T Consensus        26 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   63 (109)
T 2yt6_A           26 GVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWW   63 (109)
T ss_dssp             SCCEEEESSCCCCSSTTSCCCCTTCEEEEEECSCTTCE
T ss_pred             CCEEEEECccCCCCCCCccCCCCCCEEEEEEccCCCcE
Confidence            44668999999999999999999999999887788995

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=96.79  E-value=0.00051  Score=48.68  Aligned_cols=36  Identities=25%  Similarity=0.273  Sum_probs=31.2

Q ss_pred             eeeeeccCCCc-CCccceeeecCCEEEEEEe-cCcchh
Q 020634          284 FLAEAIHPFTA-ASEKELSLGVGDYVVVRKV-CYISFL  319 (323)
Q Consensus       284 Flaev~hpf~a-ese~ELsLsvGDyVVVRqV-s~~GWs  319 (323)
                      -.+.++++|.| +.+.||+|..||.|.|-.- ..+||-
T Consensus         7 ~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~~Ww   44 (67)
T 2kxc_A            7 QKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWL   44 (67)
T ss_dssp             CEEEESSCBCCSSCSSBCCBCTTCEEEESSSSCBTTEE
T ss_pred             EEEEEeecCCCCCCCCCCcCCCCCEEEEeECCCCCCcE
Confidence            35689999997 9999999999999999774 778884

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.79  E-value=0.0006  Score=49.33  Aligned_cols=36  Identities=31%  Similarity=0.160  Sum_probs=31.4

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCc--chh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYI--SFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~--GWs  319 (323)
                      -.+.++++|.++.+.||+|..||.|.|-+-.++  ||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww   45 (73)
T 2dm1_A            8 GTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWW   45 (73)
T ss_dssp             SEEEESSCBCCCSTTBCCBCTTCEEECCBSSSSSSSCE
T ss_pred             CEEEECccCCcCCCCcCCCCCCCEEEEEEecCCCCCeE
Confidence            347899999999999999999999999877644  884

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=96.77  E-value=0.0012  Score=45.71  Aligned_cols=35  Identities=23%  Similarity=0.215  Sum_probs=29.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecC-cchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCY-ISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~-~GWs  319 (323)
                      .+.++++|.++.+.||+|..||.|.|=.-.. .||-
T Consensus         7 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~   42 (63)
T 3eg3_A            7 LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWC   42 (63)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEEEEECTTSSEE
T ss_pred             EEEEcceECCCCCCccCCCCCCEEEEEEeCCCCCeE
Confidence            5678999999999999999999998876444 4474

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=96.73  E-value=0.0014  Score=47.82  Aligned_cols=38  Identities=18%  Similarity=0.226  Sum_probs=33.2

Q ss_pred             hheeeeeccCCCcCCcc-ceeeecCCEEEEEEecCc-----chh
Q 020634          282 VYFLAEAIHPFTAASEK-ELSLGVGDYVVVRKVCYI-----SFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~-ELsLsvGDyVVVRqVs~~-----GWs  319 (323)
                      ....+.++++|.++.+. ||+|..||.|.|-.-...     ||-
T Consensus        13 ~~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww   56 (80)
T 2v1r_A           13 KLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWW   56 (80)
T ss_dssp             GCEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEE
T ss_pred             cCEEEEECccCCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcE
Confidence            45678999999999999 999999999998777665     884

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.72  E-value=0.001  Score=48.55  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=31.7

Q ss_pred             eeeeeccCCCcCC-------ccceeeecCCEEEEEE-ecCcchhh
Q 020634          284 FLAEAIHPFTAAS-------EKELSLGVGDYVVVRK-VCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aes-------e~ELsLsvGDyVVVRq-Vs~~GWse  320 (323)
                      ..+.++++|+++.       +.||+|..||.|.|-+ ....||-+
T Consensus         8 ~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~   52 (75)
T 2ege_A            8 KIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYY   52 (75)
T ss_dssp             EEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEE
T ss_pred             cEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEE
Confidence            4578999999999       9999999999997764 57888853

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.71  E-value=0.0016  Score=47.72  Aligned_cols=37  Identities=11%  Similarity=0.227  Sum_probs=32.2

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec-Ccchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC-YISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs-~~GWse  320 (323)
                      ..+.++++|+++.+.||+|..||.|.|-+-. +.||-.
T Consensus        14 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~   51 (78)
T 2dl5_A           14 LTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVK   51 (78)
T ss_dssp             EEEEECSCBCCCSTTBCCBCSSEEEEEEECCSSSSEEE
T ss_pred             cEEEEceeECCCCCCCCCCCCCCEEEEEeccCCCCcEE
Confidence            4589999999999999999999999888776 488853

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=96.71  E-value=0.0011  Score=50.80  Aligned_cols=37  Identities=27%  Similarity=0.261  Sum_probs=32.5

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec-----Ccchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC-----YISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs-----~~GWse  320 (323)
                      -.+.++++|+++.++||+|..||.|.|-+-.     ..||-.
T Consensus        30 ~~~~Alydy~a~~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~   71 (89)
T 2rf0_A           30 PVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWT   71 (89)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEECCHHHHSSTTEEE
T ss_pred             cEEEECCccCCCCCCccccCCCCEEEEEeccCCcccCCCEEE
Confidence            4568999999999999999999999998874     789853

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.67  E-value=0.0017  Score=49.53  Aligned_cols=39  Identities=21%  Similarity=0.198  Sum_probs=34.9

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|+++.+.||+|..||.|.|-+....||-.
T Consensus        33 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   71 (98)
T 1udl_A           33 PVCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ   71 (98)
T ss_dssp             CSEEEEESSCCCCSSTTSCCCCTTCEEEECBCCSSSEEB
T ss_pred             CceEEEECCCCCCCCCCccCCcCCCEEEEEEecCCCEEE
Confidence            357789999999999999999999999998888889953

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.67  E-value=0.00077  Score=51.10  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=31.5

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec--Ccchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWse  320 (323)
                      -.+.++++|+++.+.||+|..||.|.|-.-.  ..||-.
T Consensus         6 ~~~~Alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~gWw~   44 (93)
T 1uff_A            6 SGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLY   44 (93)
T ss_dssp             CCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEE
T ss_pred             EEEEECccCCCCCCCCcCCCCCCEEEEeEccCCCCCEEE
Confidence            3568999999999999999999999987654  788853

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=96.66  E-value=0.00048  Score=52.05  Aligned_cols=38  Identities=29%  Similarity=0.329  Sum_probs=33.9

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ....+.++++|.++.++||||..||.|.|-+-...||-
T Consensus        17 ~~~~~~Alydy~a~~~~eLsf~~Gd~I~Vl~~~~~gWw   54 (79)
T 1z9q_A           17 AAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWL   54 (79)
T ss_dssp             SCCCEEESSCCCCSSTTBCCCCTTCCBCCCEESSSSEE
T ss_pred             CceEEEEcCccCCCCCCcccccCCCEEEEeEecCCCEE
Confidence            34668999999999999999999999999887888995

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=96.64  E-value=0.0013  Score=49.32  Aligned_cols=36  Identities=17%  Similarity=0.129  Sum_probs=31.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -.+.++++|.++.++||||..||.|.|-.....||-
T Consensus         7 ~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~~~~Ww   42 (84)
T 4ag1_C            7 TLFVALYDYNATRWTDLSFHKGEKFQILEFGPGDWW   42 (84)
T ss_dssp             CEEEESSCBCCSBTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEEEcccCCCCCCCcccccCCCEEEEEEecCCCeE
Confidence            356789999999999999999999988888788884

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.63  E-value=0.0012  Score=48.26  Aligned_cols=35  Identities=11%  Similarity=0.026  Sum_probs=31.4

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -.+.++++|+++ +.||+|..||.|.|=+-..+||-
T Consensus        11 ~~~~alydy~~~-~~eLs~~~Gd~i~vl~~~~~gWw   45 (75)
T 2egc_A           11 DVYVSIADYEGD-EETAGFQEGVSMEVLERNPNGWW   45 (75)
T ss_dssp             EEEEECSCBCCC-SSSCCBCTTCEEEECEECTTSEE
T ss_pred             eEEEECCCcCCC-CCcCCCCCCCEEEEEEcCCCCeE
Confidence            346799999999 99999999999999888899995

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=96.62  E-value=0.001  Score=47.76  Aligned_cols=34  Identities=15%  Similarity=0.264  Sum_probs=30.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.++++|.++.+.||+|..||.|.|-+. ..||-
T Consensus        10 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww   43 (69)
T 1uhf_A           10 EYIALYPYSSVEPGDLTFTEGEEILVTQK-DGEWW   43 (69)
T ss_dssp             EEECSSCBCCSSSSBCCBCTTCEEEECEE-ETTEE
T ss_pred             EEEEeeeECCCCcCccCCCCCCEEEEEEe-CCCEE
Confidence            46899999999999999999999999777 67884

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=96.61  E-value=0.0009  Score=48.65  Aligned_cols=36  Identities=28%  Similarity=0.248  Sum_probs=31.4

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec-Ccchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC-YISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs-~~GWs  319 (323)
                      ..+.++++|+++.+.||||..||.|.|-.-. ..||-
T Consensus        10 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww   46 (74)
T 1gbq_A           10 MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWY   46 (74)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEECCBCSSCSSEE
T ss_pred             eEEEECccCCCCCCCeeeEcCCCEEEEeEecCCCCEE
Confidence            5589999999999999999999999886665 56884

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=96.61  E-value=0.00031  Score=50.47  Aligned_cols=37  Identities=16%  Similarity=0.134  Sum_probs=32.6

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..+.++++|+++.+.||+|..||.|.|-.-...||-.
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   43 (71)
T 1hsq_A            7 CAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWR   43 (71)
T ss_dssp             SCCCCSSCCCCSSSSSCCCCTTCCCBSCCCBTTTEEC
T ss_pred             eEEEECCCCCcCCCCccCCCCCCEEEEEEecCCCEEE
Confidence            4578999999999999999999999887777889853

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=96.61  E-value=0.0014  Score=47.36  Aligned_cols=35  Identities=17%  Similarity=0.184  Sum_probs=30.8

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|.++.+.||+|..||.|.|-.- ..||-
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~Ww   42 (72)
T 2jw4_A            8 VVVVAKFDYVAQQEQELDIKKNERLWLLDD-SKSWW   42 (72)
T ss_dssp             EEEECSSCCCCSSTTSCCCCTTCEEEEEEC-SSSSE
T ss_pred             eEEEECcCCCcCCCCcccCCCCCEEEEEEC-CCCEE
Confidence            367899999999999999999999999885 56884

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=96.60  E-value=0.0016  Score=47.44  Aligned_cols=35  Identities=14%  Similarity=0.207  Sum_probs=30.6

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++.++++|+++.++|||+..||.|.|=.-+ .||-
T Consensus         5 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~-~~Ww   39 (67)
T 2b86_A            5 VIVIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWW   39 (67)
T ss_dssp             EEEEESSCBCCSSTTSCCBCTTCEEEEEECS-SSSC
T ss_pred             eEEEEeeeECCCCCCccccCCCCEEEEEecC-CCeE
Confidence            4678999999999999999999999987765 6884

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=96.60  E-value=0.001  Score=49.18  Aligned_cols=38  Identities=18%  Similarity=0.245  Sum_probs=30.5

Q ss_pred             hheeeeeccCCCcCCcc-ceeeecCCEEEEEEecC-----cchh
Q 020634          282 VYFLAEAIHPFTAASEK-ELSLGVGDYVVVRKVCY-----ISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~-ELsLsvGDyVVVRqVs~-----~GWs  319 (323)
                      -.|.|.++++|.++.+. |||+..||.|.|=.-..     .||-
T Consensus         6 ~~~~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW   49 (69)
T 1nm7_A            6 HHHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWW   49 (69)
T ss_dssp             ---CEEECSCCCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCE
T ss_pred             eeeEEEEEecccCCCCCCccCCCCCCEEEEEecCCCCCCCCCee
Confidence            46889999999999999 99999999998865543     5884

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=96.56  E-value=0.0014  Score=46.86  Aligned_cols=35  Identities=20%  Similarity=0.395  Sum_probs=30.1

Q ss_pred             eeeeeccCCCcCCcc--ceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEK--ELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~--ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +.+.++++|.++.+.  ||||..||.|.|-+. .+||-
T Consensus         6 ~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~-~~~Ww   42 (70)
T 2vkn_A            6 YKAKALYPYDADDDDAYEISFEQNEILQVSDI-EGRWW   42 (70)
T ss_dssp             EEEEESSCBCCCSSSTTBCCBCTTCEEEEECT-TSSEE
T ss_pred             EEEEECccCCCCCCCCCcccCCCCCEEEEEEc-CCCeE
Confidence            668999999999754  999999999999876 57784

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.54  E-value=0.0018  Score=48.08  Aligned_cols=35  Identities=26%  Similarity=0.338  Sum_probs=30.6

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCc-chhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYI-SFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~-GWse  320 (323)
                      ..++++|+++.+.||+|..||.|.|-+-..+ ||-.
T Consensus        20 ~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~   55 (81)
T 1x6g_A           20 CITKCEHTRPKPGELAFRKGDVVTILEACENKSWYR   55 (81)
T ss_dssp             EEESSCBSSCCTTCCCBCTTCEEEEEECCCSSSEEE
T ss_pred             EEECCCCCcCCCCCCCCCCCCEEEEEeccCCCCeEE
Confidence            5789999999999999999999999776665 8853

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.53  E-value=0.00072  Score=48.68  Aligned_cols=37  Identities=24%  Similarity=0.312  Sum_probs=32.2

Q ss_pred             eeeeeccCCCc-CCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTA-ASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~a-ese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....++++|.+ +.+.||+|..||.|.|-+-...||-.
T Consensus         8 ~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~W~~   45 (71)
T 2gqi_A            8 RRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMW   45 (71)
T ss_dssp             CCEEESSCCCCCTTSSCCCCCTTCBCCCCEECSSSCEE
T ss_pred             CEEEECcccCCCCCCCCCCCCCCCEEEEEEecCCCEEE
Confidence            35789999999 99999999999999887777789853

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=96.52  E-value=0.0018  Score=48.59  Aligned_cols=37  Identities=19%  Similarity=0.248  Sum_probs=32.2

Q ss_pred             heeeeeccCCCcCCcc-ceeeecCCEEEEEEecCc-----chh
Q 020634          283 YFLAEAIHPFTAASEK-ELSLGVGDYVVVRKVCYI-----SFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~-ELsLsvGDyVVVRqVs~~-----GWs  319 (323)
                      ...+.++++|.++.+. ||+|..||.|.|-.....     ||-
T Consensus        14 ~~~~~alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw   56 (92)
T 1jqq_A           14 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWW   56 (92)
T ss_dssp             CEEEEESSBBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEE
T ss_pred             CEEEEECccCCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCe
Confidence            3568999999999999 999999999999777665     884

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=96.51  E-value=0.0011  Score=47.00  Aligned_cols=36  Identities=19%  Similarity=0.210  Sum_probs=29.8

Q ss_pred             eeeeccCCCcCCccc-eeeecCCEEEEE-EecCcchhh
Q 020634          285 LAEAIHPFTAASEKE-LSLGVGDYVVVR-KVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~E-LsLsvGDyVVVR-qVs~~GWse  320 (323)
                      .+.++++|.+..+.| |||..||.|.|- +...+||-.
T Consensus         9 ~~~al~dy~~~~~~e~Lsf~~Gd~i~v~~~~~~~gW~~   46 (67)
T 3rnj_A            9 RVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHY   46 (67)
T ss_dssp             EEEESSCBCCCSCTTBCCBCTTCEEEECSSSCBTTEEE
T ss_pred             EEEEccccCCCCCCCCccCCCCCEEEEeeccCCCCCEE
Confidence            478999999998777 999999999886 446678853

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=96.50  E-value=0.0019  Score=48.29  Aligned_cols=34  Identities=24%  Similarity=0.297  Sum_probs=29.9

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ++.++++|.++.++||+|..||.|.|-.-+ .||-
T Consensus         5 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~-~~Ww   38 (90)
T 3reb_B            5 IVVALYDYVSWSPDDLSFQKGDQMVVLEES-GEWW   38 (90)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECS-SSEE
T ss_pred             EEEECCccCcCCcCcCCCCCCCEEEEEEeC-CCEE
Confidence            568899999999999999999999887764 6784

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.46  E-value=0.0023  Score=48.24  Aligned_cols=37  Identities=22%  Similarity=0.386  Sum_probs=31.8

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEec--C--cchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVC--Y--ISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs--~--~GWse  320 (323)
                      ..+.++|+|.++.+.||+|..||.|.|-.-.  .  .||-.
T Consensus        17 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~   57 (94)
T 2e5k_A           17 ETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIY   57 (94)
T ss_dssp             EEEEECSCBCCSSSSBCCBCTTCEEEECGGGCCSTTTTEEE
T ss_pred             eEEEECCcCCCCCCCCcCCCCCCEEEEEECcCCCCCCCcEE
Confidence            5678999999999999999999999997663  3  88853

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=96.44  E-value=0.002  Score=51.34  Aligned_cols=38  Identities=24%  Similarity=0.208  Sum_probs=32.2

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEE-EecCcc--hh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVR-KVCYIS--FL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVR-qVs~~G--Ws  319 (323)
                      ..+.+.++++|.|+.+.||||..||.|.|- +.+.+|  |-
T Consensus        21 ~~~~~~Alydy~a~~~~ELsf~~GDiI~Vl~k~~~~g~dWW   61 (108)
T 1i1j_A           21 PISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFW   61 (108)
T ss_dssp             CSEEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEE
T ss_pred             eeeEEEECCccCCCCCCccccCCCCEEEEEEecCCCCCCEE
Confidence            457799999999999999999999999774 445677  84

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=96.42  E-value=0.0019  Score=51.75  Aligned_cols=36  Identities=31%  Similarity=0.486  Sum_probs=31.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -.+.++|+|+++.++||+|.+||.|.|-+-. .||-+
T Consensus        60 ~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~-~gWw~   95 (119)
T 2rqr_A           60 RHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-GDWYR   95 (119)
T ss_dssp             EEEEBCSCBCCCSTTBCCBCTTCEEEEEEEE-TTEEE
T ss_pred             eEEEEccccCCCCCCcccCcCCCEEEEEEcC-CCEEE
Confidence            5688999999999999999999999997766 68853

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=96.39  E-value=0.0013  Score=50.68  Aligned_cols=38  Identities=18%  Similarity=0.223  Sum_probs=33.6

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      --.+.++++|.++.+.||+|..||.|.|-.-...||-.
T Consensus        18 ~~~~~Alydy~a~~~~eLsf~~Gd~i~V~~~~~~gWw~   55 (92)
T 2o2o_A           18 RRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWE   55 (92)
T ss_dssp             SCEEEECSCBCCCSSSCCCBCSSCEEECCCGGGSSCBC
T ss_pred             CeEEEEccccCCCCCccccccCCCEEEEeEecCCCEEE
Confidence            34578999999999999999999999998888889953

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=96.39  E-value=0.0012  Score=50.22  Aligned_cols=30  Identities=33%  Similarity=0.427  Sum_probs=27.4

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEE
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVR  311 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVR  311 (323)
                      .-+.+.++++|.++.+.||+|..||.|.|-
T Consensus        10 ~~~~~~Alydy~a~~~~ELsf~~GD~I~V~   39 (90)
T 3o5z_A           10 EGFQYRALYPFRRERPEDLELLPGDVLVVS   39 (90)
T ss_dssp             SEEEEEECSCBCCCSTTBCCBCTTCEEEEE
T ss_pred             CCcEEEEeeeECCCCCCccCCcCCCEEEEE
Confidence            457789999999999999999999999985

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=96.39  E-value=0.00087  Score=53.61  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=31.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.+.++++|+|+.+.||+|..||.|.|-.-...||-+
T Consensus         6 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~~~~Ww~   42 (108)
T 2rqv_A            6 LYAIVLYDFKAEKADELTTYVGENLFICAHHNCEWFI   42 (108)
T ss_dssp             CCEEESSCCCCCSSSBCCCCSSEEECCCCEETTTEEE
T ss_pred             eEEEECCCcCCCCCCcCCcCCCCEEEEeEecCCCEEE
Confidence            3589999999999999999999999886556788843

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.37  E-value=0.0018  Score=47.81  Aligned_cols=34  Identities=6%  Similarity=0.029  Sum_probs=29.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +..++++|+++.+.||+|..||.|.|=+ ...||-
T Consensus        19 ~~~Alydy~a~~~~eLs~~~Gd~i~v~~-~~~~Ww   52 (79)
T 2cud_A           19 FLAVLSDYPSPDISPPIFRRGEKLRVIS-DEGGWW   52 (79)
T ss_dssp             EEEESSCSSCTTTSCCSSCTTCEEEEEE-EETTEE
T ss_pred             EEEEccCCCCCCCCcCCCCCCCEEEEEe-cCCCeE
Confidence            5788999999999999999999998877 456774

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.36  E-value=0.0022  Score=46.79  Aligned_cols=37  Identities=22%  Similarity=0.187  Sum_probs=31.2

Q ss_pred             eeeeeccCCCcCC-------ccceeeecCCEEEEEEec-Ccchhh
Q 020634          284 FLAEAIHPFTAAS-------EKELSLGVGDYVVVRKVC-YISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aes-------e~ELsLsvGDyVVVRqVs-~~GWse  320 (323)
                      ..+.++++|+++.       +.||+|..||.|.|-+-. ++||-.
T Consensus         8 ~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~   52 (76)
T 2csi_A            8 RRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYY   52 (76)
T ss_dssp             EEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEE
T ss_pred             cEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEE
Confidence            4578999999999       999999999999998664 468853

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=96.27  E-value=0.0016  Score=48.12  Aligned_cols=30  Identities=23%  Similarity=0.435  Sum_probs=27.1

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEE
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRK  312 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRq  312 (323)
                      -+.+.++|+|.++.+.||+|..||.|.|-.
T Consensus         5 ~~~~~Alydy~~~~~~eLs~~~Gd~I~V~~   34 (83)
T 3i5r_A            5 GYQYRALYDYKKEREEDIDLHLGDILTVNK   34 (83)
T ss_dssp             EEEEEECSCBCCCSTTBCCBCTTCEEEEEH
T ss_pred             CcEEEEccccCCCCCCccccCCCCEEEEee
Confidence            366789999999999999999999999874

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=95.84  E-value=0.0058  Score=51.26  Aligned_cols=39  Identities=18%  Similarity=0.292  Sum_probs=34.6

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .-..+.++++|+++.+.||+|..||.|.|-.....||-.
T Consensus       157 ~~~~~~al~~y~~~~~~eL~~~~Gd~i~v~~~~~~~W~~  195 (217)
T 1gri_A          157 QPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK  195 (217)
T ss_dssp             CCCEEEESSCCCCSSTTBCCCCTTCEEEEEECCSSSEEE
T ss_pred             CceEEEecCCccCCCCCcCCCCCCCEEEEEEeCCCCeEE
Confidence            346789999999999999999999999998888889953

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=95.74  E-value=0.0045  Score=55.18  Aligned_cols=39  Identities=33%  Similarity=0.403  Sum_probs=34.7

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEE-----ecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRK-----VCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRq-----Vs~~GWse  320 (323)
                      ..+.+.++|+|.++.+.||+|..||.|.|-.     -...||-.
T Consensus       141 ~~~~~rALYdY~a~~~dELSf~~GDiI~Vl~~~~~~~~ddgWw~  184 (213)
T 1mv3_A          141 FMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLM  184 (213)
T ss_dssp             CCEEEEESSCBCCCSTTCCCBCSSCEEEECCCSCGGGSCTTEEE
T ss_pred             cceEEEECCCcCCCCCCcCCcCCCCEEEEeecCCCCccCCCeeE
Confidence            4577899999999999999999999999988     67789953

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=95.72  E-value=0.0059  Score=43.36  Aligned_cols=37  Identities=24%  Similarity=0.137  Sum_probs=28.6

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEe-cCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKV-CYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqV-s~~GWse  320 (323)
                      +.-.+.++|.+.++.||||..||.|.|-+. ..+||-+
T Consensus        11 ~~y~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~   48 (70)
T 1gcq_C           11 QEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWE   48 (70)
T ss_dssp             SCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEE
T ss_pred             EEEEecCCCCCCCCCcCCcCCCCEEEEEeCCCCCCCeE
Confidence            344556777777777999999999988877 6789853

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=95.67  E-value=0.0073  Score=51.09  Aligned_cols=36  Identities=28%  Similarity=0.194  Sum_probs=32.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++++|+++.++||+|..||.|.|-.-..+||-.
T Consensus        83 ~~~al~dy~a~~~~eLs~~~Gd~i~vl~~~~~gWw~  118 (193)
T 1ng2_A           83 PYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWV  118 (193)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEE
T ss_pred             eeeeccccCCCCCCcccccCCCEEEEEEecCCCeEE
Confidence            456899999999999999999999998888999954

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=95.62  E-value=0.0063  Score=54.87  Aligned_cols=39  Identities=26%  Similarity=0.223  Sum_probs=34.8

Q ss_pred             hheeeeeccCCC--cCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFT--AASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~--aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .-..+.++++|.  |+.+.||+|.+||.|.|-+...+||-+
T Consensus       236 ~~~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~~gWw~  276 (304)
T 2eyz_A          236 GPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWE  276 (304)
T ss_dssp             CCCCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECTTSCEE
T ss_pred             CCEEEEEeeeecCCCCCCCeecccCCCEEEEEEecCCCeEE
Confidence            446789999999  889999999999999999998999964

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=95.61  E-value=0.0068  Score=57.28  Aligned_cols=38  Identities=13%  Similarity=0.119  Sum_probs=32.8

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .-.+.++++|+++.++||||..||.|.|-....+||-+
T Consensus        85 ~~~~~alyd~~~~~~~el~~~~gd~i~v~~~~~~~ww~  122 (535)
T 2h8h_A           85 VTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWL  122 (535)
T ss_dssp             --CEEESSCBCCCSSSBCCBCTTCEEEEEECSSSSEEE
T ss_pred             CcEEEEccccCCcCCCcCCcCCCCEEEEEEecCCCceE
Confidence            34688999999999999999999999998888888853

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=95.36  E-value=0.016  Score=52.96  Aligned_cols=39  Identities=28%  Similarity=0.324  Sum_probs=34.2

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..-.+.++++|+++.++||++..||.|.|-.-...||-+
T Consensus       173 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~  211 (341)
T 2dyb_A          173 AAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLE  211 (341)
T ss_dssp             CCCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSSEEE
T ss_pred             CCcEEEEEEeeCCCCCCcCCccCCCEEEEEEecCCCEEE
Confidence            345689999999999999999999999998878899953

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=95.22  E-value=0.013  Score=48.25  Aligned_cols=38  Identities=13%  Similarity=0.191  Sum_probs=33.3

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      --.+.++++|++..++||++..||.|.|-.-...||-+
T Consensus       118 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~  155 (174)
T 3qwx_X          118 IEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWE  155 (174)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             ccEEEEecCcccCCCCccccccCCEEEEEEccCCCeEE
Confidence            34678999999999999999999999998877889853

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=95.08  E-value=0.0085  Score=55.90  Aligned_cols=39  Identities=21%  Similarity=0.263  Sum_probs=35.3

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|.++.++|||+..||.|.|-.....||-+
T Consensus        29 ~~~~~~al~~~~~~~~~eL~~~~gd~i~v~~~~~~~Ww~   67 (466)
T 2pz1_A           29 SVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWW   67 (466)
T ss_dssp             CCEEEEESSCBCCCCTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             CccEEEEccccCCCCCCcCCCCCCCEEEEEEecCCCEEE
Confidence            467889999999999999999999999998888899953

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}

Probab=95.07  E-value=2.1  Score=39.48  Aligned_cols=178  Identities=11%  Similarity=0.154  Sum_probs=103.5

Q ss_pred             HHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCC-CccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHH
Q 020634           65 RDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQN-INENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRA  143 (323)
Q Consensus        65 rdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~-~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRa  143 (323)
                      +.+++.+..++..|..-....+.|++....|..++.+. ..+..+.-+-..|+.....++..+..|+.-+...|.+||..
T Consensus        61 ~kl~k~~~~~~~~~~~~~~a~~~f~~~l~~~~~~~~~~~~~d~~~~~~l~~f~~~~~ei~~~~~~L~~~~~~~i~~pL~~  140 (407)
T 4h8s_A           61 NQLLQAMQRVYGAQNEMCLATQQLSKQLLAYEKQNFALGKGDEEVISTLHYFSKVVDELNLLHTELAKQLADTMVLPIIQ  140 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444444444444333344445555555565554311 12233555567899999999999999999999999999999


Q ss_pred             hhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 020634          144 MITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEA  223 (323)
Q Consensus       144 Mv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEa  223 (323)
                      .+.+. |.+++.+..+||+...+-++-....+. ..|.++.     ..+..-+...|.+.+...--..-+-..+|..+..
T Consensus       141 f~k~d-i~~~ke~kK~Fek~~~~Yd~~l~Ky~~-~~k~k~~-----~~~~~e~~~~l~~~Rk~f~~asldyv~~l~~lq~  213 (407)
T 4h8s_A          141 FREKD-LTEVSTLKDLFGLASNEHDLSMAKYSR-LPKKKEN-----EKVKTEVGKEVAAARRKQHLSSLQYYCALNALQY  213 (407)
T ss_dssp             HHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-SCSTTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccCCc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99883 666777778888888877765544332 1222221     2222233344444444333333344456666665


Q ss_pred             HhHHHHHHHHHHHHHhhhhHHHHHHH
Q 020634          224 QQHRLTFQRLVAMVEGEKNYHLRIAA  249 (323)
Q Consensus       224 QQQrlTlQRLiaMVeaEr~YHqrv~~  249 (323)
                      ..-.--++-|+..+.+--+|++.-.+
T Consensus       214 rk~~e~le~l~~~~~a~~~~f~~~~~  239 (407)
T 4h8s_A          214 RKQMAMMEPMIGFAHGQINFFKKGAE  239 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55545555566666666555544433

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=94.47  E-value=0.027  Score=40.95  Aligned_cols=33  Identities=18%  Similarity=0.099  Sum_probs=26.6

Q ss_pred             eeccCCCcC---CccceeeecCCEEEEEEec-Ccchh
Q 020634          287 EAIHPFTAA---SEKELSLGVGDYVVVRKVC-YISFL  319 (323)
Q Consensus       287 ev~hpf~ae---se~ELsLsvGDyVVVRqVs-~~GWs  319 (323)
                      .++++|+++   .+.||||..||.|.|-+-. ..||-
T Consensus        19 ~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw   55 (78)
T 1k1z_A           19 QEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWW   55 (78)
T ss_dssp             SCBSSCSCCSSSSCCCCCBCTTCEEEEEECCSSCSCE
T ss_pred             EECCCCCCCCCCCCCccCCCCCCEEEEEEcCCCCCeE
Confidence            556777775   3799999999999988874 88984

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=93.41  E-value=0.0072  Score=54.43  Aligned_cols=40  Identities=25%  Similarity=0.249  Sum_probs=34.1

Q ss_pred             hhheeeeeccCCCcCC--ccceeeecCCEEEEEEecCcchhh
Q 020634          281 AVYFLAEAIHPFTAAS--EKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       281 ~~yFlaev~hpf~aes--e~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .....+.++++|.+++  ++||+|.+||.|.|-+....||-+
T Consensus       235 ~~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~  276 (303)
T 2lqn_A          235 NGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWE  276 (303)
Confidence            3567899999997554  889999999999998888999964

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=93.68  E-value=0.042  Score=49.48  Aligned_cols=37  Identities=19%  Similarity=0.292  Sum_probs=32.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -.+.++++|.++.+.||++..||.|.|-+-...||-.
T Consensus       135 ~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~  171 (304)
T 2eyz_A          135 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWN  171 (304)
T ss_dssp             CEEEECSCCCCSCSSSCCCCTTCEEEEEECCSSSEEE
T ss_pred             eeEEEEeeecCCCCCcCcccCCCEEEEEEecCCCcEE
Confidence            3578999999999999999999999999888888853

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=93.30  E-value=0.055  Score=48.60  Aligned_cols=38  Identities=13%  Similarity=0.191  Sum_probs=33.3

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .-.+.++++|+++.+.||+|..||.|.|-.-...||-.
T Consensus       147 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~  184 (308)
T 3qwy_A          147 IEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWE  184 (308)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             ceeEEEeceEcCCCCCcCcCCCCCEEEEEEcCCCCeEE
Confidence            34688999999999999999999999998877888853

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=93.20  E-value=0.018  Score=49.86  Aligned_cols=36  Identities=19%  Similarity=0.297  Sum_probs=32.3

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -.+.++++|+++.+.||+|..||.|.|-.-...||-
T Consensus       137 ~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww  172 (230)
T 2dvj_A          137 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWW  172 (230)
T ss_dssp             CCCBCCSCCCCSSSSSCCCCSSCBCCCCBCSCSSEE
T ss_pred             eeEEEeeeecCCCCCCccCcCCCEEEEEEccCCCcE
Confidence            357899999999999999999999999887788984

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=93.00  E-value=0.018  Score=51.79  Aligned_cols=38  Identities=16%  Similarity=0.088  Sum_probs=0.0

Q ss_pred             heeeeeccCC--CcCCccceeeecCCEEEEEEecCcchhh
Q 020634          283 YFLAEAIHPF--TAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       283 yFlaev~hpf--~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .-.+.|+.+|  .++++.||+|.+||.|.|-+...+||-+
T Consensus       247 ~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~ww~  286 (308)
T 3qwy_A          247 PAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYK  286 (308)
T ss_dssp             ----------------------------------------
T ss_pred             ccccccccccccccCCcccceeCCCCEEEEEEEcCCCcEE
Confidence            4568999999  5555699999999999999987888853

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=92.82  E-value=0.067  Score=52.91  Aligned_cols=37  Identities=16%  Similarity=0.201  Sum_probs=32.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -...|++||.++.+.||+|.+||.|.|-.-..+||..
T Consensus       443 ~~~~aly~y~a~~~dELs~~~GD~i~v~~~~~~gW~~  479 (526)
T 2de0_X          443 HNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSK  479 (526)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEEECSSSEEE
T ss_pred             cceEEeecCCCCCCCcCCcCCCCEEEEccccCCCeeE
Confidence            3467899999999999999999999888778899964

>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}

Probab=92.77  E-value=4.7  Score=35.36  Aligned_cols=214  Identities=13%  Similarity=0.167  Sum_probs=120.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchh
Q 020634           11 LKEQVAKQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSE   90 (323)
Q Consensus        11 lrEqVAkQQQAV~Kqf~~~gy~~~d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLae   90 (323)
                      +...+.|-.|-|.-.+|.+ -...|..+-|+  -++.+.||+      .++.+|+++-.=.+.+-+.-.-|..++.-|.+
T Consensus         9 ~~K~~~R~~q~lkqk~G~~-e~T~D~~Fe~~--e~rF~~le~------~~~kL~k~~k~y~~ai~~~~~~q~~~~~~l~~   79 (237)
T 4avm_A            9 VQKKFSRAQEKVLQKLGKA-VETKDERFEQS--ASNFYQQQA------EGHKLYKDLKNFLSAVKVMHESSKRVSETLQE   79 (237)
T ss_dssp             HHHHHHHHHHHHHHHTTSS-CCCCCHHHHHH--HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhHHHHHHcCCC-cccccHHHHHH--HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4445777788888888843 22344444222  223334443      35667777655444444333334433333322


Q ss_pred             hhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHH-H------HHHH
Q 020634           91 DCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQ-R------YSRM  163 (323)
Q Consensus        91 Dc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaq-R------YdRm  163 (323)
                         =|+...    .|.      ..|......++.=-.+++..|.++|..||..+..=  +.+-+.+.. |      |||.
T Consensus        80 ---~y~~~~----~~~------~~~~~~~~~~~~l~~~~~~~l~~~vi~Pl~~~~~~--~~~i~k~I~KR~~kllDyd~~  144 (237)
T 4avm_A           80 ---IYSSEW----DGH------EELKAIVWNNDLLWEDYEEKLADQAVRTMEIYVAQ--FSEIKERIAKRGRKLVDYDSA  144 (237)
T ss_dssp             ---HSCTTS----TTH------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HhCCcc----CcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHH
Confidence               233322    111      12333333333335667777888999999988743  333343333 3      5666


Q ss_pred             HHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhH
Q 020634          164 RQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNY  243 (323)
Q Consensus       164 RQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~Y  243 (323)
                      |..++.-       +.|    +.-| ..||..||.++.+.+.....|...--.=|-..-.=...+--.-|-++|..++.|
T Consensus       145 ~~~~~kl-------~~k----~~kd-~~kl~kae~el~~a~~~ye~lN~~L~~eLP~l~~~~~~~~~~~~~~~i~~q~~f  212 (237)
T 4avm_A          145 RHHLEAV-------QNA----KKKD-EAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVF  212 (237)
T ss_dssp             HHHHHHH-------HTC----SSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-------Hhc----cCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6555432       222    2222 579999999999988887777665544443333333333334466788899999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 020634          244 HLRIAAILGDVEAEMVS  260 (323)
Q Consensus       244 Hqrv~~ILd~l~~EMvs  260 (323)
                      |..+..+...|.+=|..
T Consensus       213 ~~~~~~~~~~l~~~~~~  229 (237)
T 4avm_A          213 YREMSKLNHNLYEVMSK  229 (237)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhHHHHHHH
Confidence            99998888888876653

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=91.28  E-value=0.028  Score=50.60  Aligned_cols=37  Identities=11%  Similarity=0.191  Sum_probs=32.6

Q ss_pred             heeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      --.+.++++|+++.++||+|..||.|.|-+-...||-
T Consensus       125 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~Ww  161 (303)
T 2lqn_A          125 LEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWW  161 (303)
Confidence            3457899999999999999999999999887788884

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=91.46  E-value=0.075  Score=41.83  Aligned_cols=34  Identities=26%  Similarity=0.308  Sum_probs=27.5

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecC--cchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCY--ISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~--~GWs  319 (323)
                      --|+|+|.|.++.|||++.||.|-|=.-..  .+|.
T Consensus        20 ~valydF~Ar~~~ELS~~kGd~vevle~~~~~peW~   55 (82)
T 1u3o_A           20 TVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWC   55 (82)
T ss_dssp             EECSSCBCCCSTTCCCBCTTCEEEESSCTTSSTTEE
T ss_pred             EEEEeeecCCCCCeeeEcCCCEEEEEecCCCCCCEE
Confidence            478999999999999999999987755331  4663

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=90.75  E-value=0.075  Score=38.77  Aligned_cols=26  Identities=15%  Similarity=0.289  Sum_probs=23.3

Q ss_pred             cCCccceeeecCCEEEEEEecCcchh
Q 020634          294 AASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       294 aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      |++++||||..||.|.|-+-...||-
T Consensus         2 a~~~~eLs~~~Gd~i~v~~~~~~~Ww   27 (77)
T 2jmc_A            2 AMGPREVTMKKGDILTLLNSTNKDWW   27 (77)
T ss_dssp             CSSSCCCCCCTTCEEECCCCCCSSCC
T ss_pred             CcCCCccCCCCCCEEEEEEecCCCEE
Confidence            57899999999999999888888984

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=90.15  E-value=0.15  Score=35.79  Aligned_cols=24  Identities=13%  Similarity=0.289  Sum_probs=21.6

Q ss_pred             CccceeeecCCEEEEEEecCcchh
Q 020634          296 SEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       296 se~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +++||+|..||.|.|-+-...||-
T Consensus         2 ~~~eLs~~~Gd~i~v~~~~~~~Ww   25 (63)
T 1tuc_A            2 GPREVTMKKGDILTLLNSTNKDWW   25 (63)
T ss_dssp             CCCCCCBCTTCEEEEEECCSSSEE
T ss_pred             CccccCCCCCCEEEEEEecCCCEE
Confidence            578999999999999988888984

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=89.66  E-value=0.23  Score=46.26  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=30.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEec-Ccchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVC-YISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs-~~GWse  320 (323)
                      +..++++|++..++|||+..||.|.|=+-+ ..||-.
T Consensus        45 ~~~alyd~~~~~~~els~~~gd~~~v~~~~~~~~w~~   81 (495)
T 1opk_A           45 LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCE   81 (495)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEE
T ss_pred             EEEEeCCcCCCCCCCCCccCCCEEEEeecCCCCCcee
Confidence            567899999999999999999999876544 678853

>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A

Probab=86.83  E-value=18  Score=32.76  Aligned_cols=174  Identities=11%  Similarity=0.136  Sum_probs=106.4

Q ss_pred             hheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCcc
Q 020634           72 EVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLE  151 (323)
Q Consensus        72 EGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLE  151 (323)
                      -+.+..+.-=++...|+++-+-.    ++  .+. -|.-+-......++.+|..++++.+.|-..+.-||.-=|-    +
T Consensus        46 ~~~~~a~~~f~dal~kia~~A~~----s~--gs~-elG~~L~~i~~~~r~ie~~l~~~~~~~~~~li~pL~~kie----~  114 (253)
T 2ykt_A           46 AGVTYAAKGYFDALVKMGELASE----SQ--GSK-ELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVE----L  114 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT----SS--SCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH----H
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc----Cc--chH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h
Confidence            33444444445666666664432    11  122 3555556678889999999999999999999999887442    2


Q ss_pred             ch-------hhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChh-hhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Q 020634          152 DA-------RHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPE-NVAKLHAAEARMQELKANMAILGKEAAAALAAIEA  223 (323)
Q Consensus       152 DA-------RhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e-~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEa  223 (323)
                      |-       ++.+.-|.+-+++.+-...|+.|-+.|.+.+.|+. .-.|+..+-.-+.+.++.|-..=+++--.-.--|-
T Consensus       115 d~K~v~~~~K~~~~e~k~~~~~l~K~~~e~~kl~KK~k~gk~~~~~~~~~~~~~e~v~~~~~~le~~~~~~lr~aL~EER  194 (253)
T 2ykt_A          115 DSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEER  194 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHhhccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32       34456778889999988889888877766332431 01345544445555555555544444443333333


Q ss_pred             HhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 020634          224 QQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEA  256 (323)
Q Consensus       224 QQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~  256 (323)
                      =.=..=+.++...+..|-+||.....+|..--.
T Consensus       195 rRycflv~~~~~v~~~~~~~h~~~~~~L~~~l~  227 (253)
T 2ykt_A          195 RRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLP  227 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            333334577888899999999887777765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	323
d1i4da_	200	a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Hum	1e-10
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	3e-04
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	0.002
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	0.004
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	0.004

>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]} Length = 200

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: Arfaptin, Rac-binding fragment
domain: Arfaptin, Rac-binding fragment
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 1e-10
 Identities = 32/203 (15%), Positives = 70/203 (34%), Gaps = 11/203 (5%)

Query: 49  QLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENIL 108
           +LE      R TK     ++++    TA  Y  ++    L +       ++ +      L
Sbjct: 7   ELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPE------L 60

Query: 109 PKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAE 168
            +      + +K + K  E     ++  V      +     +ED     ++Y   R E +
Sbjct: 61  QEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTK--TMEDTLMTVKQYEAARLEYD 118

Query: 169 TQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRL 228
               ++ +     R+A       +L +A+A  Q  +     L  + A  L  +E  + ++
Sbjct: 119 AYRTDLEELSLGPRDAGTRG---RLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKV 175

Query: 229 TFQRLVAMVEGEKNYHLRIAAIL 251
             ++L+        Y       L
Sbjct: 176 MHKQLLLFHNAVSAYFAGNQKQL 198

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 276 NSSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVC 314
           + S  +   + +A   F   +E ELS+  GD + V +V 
Sbjct: 3   SGSSGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVE 41

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 8/39 (20%), Positives = 14/39 (35%)

Query: 276 NSSQKAVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVC 314
           + S    +  A+A++   A  + ELS   G         
Sbjct: 3   SGSSGTPFRKAKALYACKAEHDSELSFTAGTVFDNVHPS 41

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 7/29 (24%), Positives = 14/29 (48%)

Query: 286 AEAIHPFTAASEKELSLGVGDYVVVRKVC 314
           A+A+  +TA  +  L+    D + V +  
Sbjct: 13  AQALCSWTAKKDNHLNFSKHDIITVLEQQ 41

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 33.4 bits (76), Expect = 0.004
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 282 VYFLAEAIHPFTAASEKELSLGVGDYVVV 310
             F  +A H +TA    EL L  GD V+V
Sbjct: 11  FMFKVQAQHDYTATDTDELQLKAGDVVLV 39

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	323
d1i4da_	200	Arfaptin, Rac-binding fragment {Human (Homo sapien	99.31
d2d4ca1	237	Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.16
d1urua_	217	Amphiphysin {Fruit fly (Drosophila melanogaster) [	98.89
d1y2oa1	248	BAP2/IRSp53 N-terminal domain {Human (Homo sapiens	98.31
d2elba1	268	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	97.95
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	97.87
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	97.72
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	97.68
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	97.63
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	97.62
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	97.59
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	97.59
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.58
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	97.53
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	97.52
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.51
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	97.39
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	97.39
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	97.39
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.37
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	97.34
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	97.33
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	97.22
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	97.21
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	97.2
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	97.17
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.16
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	97.14
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	97.11
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	97.1
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	97.06
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	97.04
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	97.02
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	97.0
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	96.98
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	96.95
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	96.94
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	96.88
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	96.87
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	96.84
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	96.77
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	96.76
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	96.76
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	96.7
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	96.66
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	96.39
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	96.24
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	96.05
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	95.89
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	95.77
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	94.41
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	93.0
d2efla1	288	Formin-binding protein 1, FNBP1 {Human (Homo sapie	92.96
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	91.87
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	83.67

>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: Arfaptin, Rac-binding fragment
domain: Arfaptin, Rac-binding fragment
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=9e-11  Score=93.00  Aligned_cols=180  Identities=14%  Similarity=0.177  Sum_probs=146.8

Q ss_pred             hhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHH
Q 020634           63 FQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLR  142 (323)
Q Consensus        63 FQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLR  142 (323)
                      +-+.|++-++.++..+..-......|+..++.+|..+|      .+..+-..||.+...|++.++.++..+...|.+|++
T Consensus        21 ~~~~l~k~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   94 (200)
T d1i4da_          21 KYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSP------ELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINT   94 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG------GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            33667777777777777777778888888888887765      356677789999999999999999999888887776


Q ss_pred             HhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHH
Q 020634          143 AMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIE  222 (323)
Q Consensus       143 aMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVE  222 (323)
                      ...  ..+.+.++...+|++.|.+-+.....+.+.+.+.+   ..-...||..||.++.+.+.....+..+...-|-.++
T Consensus        95 ~~~--~~~~~~~~~~kk~~~~~~dyd~~~~k~~~~~~~~~---~~~~~~kl~~ae~~~~~a~~~fe~~~~~~~~~l~~l~  169 (200)
T d1i4da_          95 LVT--KTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPR---DAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLE  169 (200)
T ss_dssp             HHH--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhccc---ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            533  56889999999999999999999988877655533   2223459999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 020634          223 AQQHRLTFQRLVAMVEGEKNYHLRIAAILGD  253 (323)
Q Consensus       223 aQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~  253 (323)
                      ..+...-.+.|++++++..+||+.++..|++
T Consensus       170 ~~r~~~~~~~l~~~~~~~~~f~~~~~~~le~  200 (200)
T d1i4da_         170 ENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQ  200 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999998863

>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: BAR domain
domain: Endophilin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.3e-09  Score=85.18  Aligned_cols=215  Identities=17%  Similarity=0.265  Sum_probs=152.4

Q ss_pred             HHHHHHHHHhcCCCCCCCCcceechHHHHHHHHHHHHHhhhhch-hhhhHHHhhhhhheeecccc---------------
Q 020634           17 KQQQAVIKQFSASGYERSDVMVIDEVEMQRHQQLEKLYRSTRGT-KDFQRDLVKVAEVFTAIGYK---------------   80 (323)
Q Consensus        17 kQQQAV~Kqf~~~gy~~~d~~v~DE~Elq~hq~LekLY~STRaa-KhFQrdIVRgvEGfis~gsK---------------   80 (323)
                      |-+|.|.-.||.+     |..=+|+.    ..+||+-+..+|.+ +.++|++.--.++-+....+               
T Consensus         2 R~~q~~~ek~G~~-----e~T~ld~~----f~~lEk~~~~~~~~~~kl~k~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~   72 (237)
T d2d4ca1           2 KATQKVSEKVGGA-----EGTKLDDD----FKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEK   72 (237)
T ss_dssp             HHHHHHHHHHTSH-----HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCSGGGCSCC--------------
T ss_pred             chhHHHHhHcCCC-----CcCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHhhhccccc
Confidence            3467888899832     33324553    66788888888876 88888886555443322111               


Q ss_pred             ---hhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHH
Q 020634           81 ---HIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLA  157 (323)
Q Consensus        81 ---q~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLa  157 (323)
                         -..-...|+..+..+|.+-+   .++.++.+-..||.+...|...|.++...+...|.+||+..+..    |-+...
T Consensus        73 ~~~~~~~~~~l~~~~~~~~~~~~---~d~~~~~~L~~~~~~~~~i~~~~~~~~~~i~~~v~~pl~~~l~~----d~~~~~  145 (237)
T d2d4ca1          73 GPGYPQAEALLAEAMLKFGRELG---DDCNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDK----DLREIQ  145 (237)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHC---SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT----HHHHHH
T ss_pred             ccchhhhhHHHHHHHHHhcccCC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence               11122457888888887743   44568999999999999999999999999999999999999884    555556


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 020634          158 QRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMV  237 (323)
Q Consensus       158 qRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMV  237 (323)
                      ..+++.|...+..-.+..+.+.|....  ++  -.|+.|+.++.+.       -.++...|-.+..=..- -+..|..+|
T Consensus       146 ~~~~~~rk~~d~~~~~~~~~~~k~~~~--~~--e~l~~a~~~~e~~-------~~~~~~~l~~l~~~~~~-~~~~l~~~~  213 (237)
T d2d4ca1         146 SALQHHLKKLEGRRLDFDYKKKRQGKI--PD--EELRQALEKFDES-------KEIAESSMFNLLEMDIE-QVSQLSALV  213 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSSC--CH--HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhh--hH--HHHHHHHHHHHHH-------HHHHHHHHHHHHHccHH-HHHHHHHHH
Confidence            666777777776666666665554432  22  2455666665554       45666777777543333 368899999


Q ss_pred             HhhhhHHHHHHHHHHHHHHHHH
Q 020634          238 EGEKNYHLRIAAILGDVEAEMV  259 (323)
Q Consensus       238 eaEr~YHqrv~~ILd~l~~EMv  259 (323)
                      +++..||+...++|..|..+|-
T Consensus       214 ~aq~~y~~~~~~~l~~l~~~l~  235 (237)
T d2d4ca1         214 QAQLEYHKQAVQILQQVTVRLE  235 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998874

>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: BAR domain
domain: Amphiphysin
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.89  E-value=1.7e-07  Score=74.69  Aligned_cols=203  Identities=18%  Similarity=0.192  Sum_probs=164.2

Q ss_pred             CcceechHHHHHHHHHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHH
Q 020634           35 DVMVIDEVEMQRHQQLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAI  114 (323)
Q Consensus        35 d~~v~DE~Elq~hq~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~  114 (323)
                      +-. +||.=-...+.|..+=..+       +.|.+.+++|+..+..-......|++.++.++...+  +.   .    ..
T Consensus         7 ~~T-~D~~fe~~~~~~~~~e~~l-------~~l~k~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~---~----~~   69 (217)
T d1urua_           7 DRT-ADEIFDDHLNNFNRQQASA-------NRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQW--SG---Y----DA   69 (217)
T ss_dssp             TCC-HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS--TT---H----HH
T ss_pred             CCc-ccHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--ch---H----HH
Confidence            444 3877655666665553322       345566778888888888899999999999887654  11   2    24


Q ss_pred             hhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCCChhhhhhhH
Q 020634          115 YGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAPNPENVAKLH  194 (323)
Q Consensus       115 yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~n~e~~~KLq  194 (323)
                      +......++.-..++...+..+|.+||+..+.  -+.+.+.+..+.++.+.+-+..-..+.+.+.|.+.   ..+-.|+.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~v~~pL~~~~~--~~~~~~~~~kkr~~~~~dyd~~~~~l~k~~~k~~~---~~~~~~l~  144 (217)
T d1urua_          70 LQAQTGASESLWADFAHKLGDQVLIPLNTYTG--QFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANK---RKDDVKLT  144 (217)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCB---TTBCCTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccchhhhH
Confidence            45566677777888999999999999999885  58889999999999999999998888887666432   23346899


Q ss_pred             HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 020634          195 AAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHLRIAAILGDVEAEMV  259 (323)
Q Consensus       195 ~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHqrv~~ILd~l~~EMv  259 (323)
                      .|+.++...+.....++.+-..-|-.++......-.+-|.+++++...||..+..++..|+..|.
T Consensus       145 ~~e~~~~~a~~~fe~~~~~l~~el~~~~~~~~~~~~~~l~~~~~~q~~~~~~~~~~~~~l~~~~~  209 (217)
T d1urua_         145 KGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVD  209 (217)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999998774

>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: IMD domain
domain: BAP2/IRSp53 N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.4e-05  Score=65.32  Aligned_cols=189  Identities=8%  Similarity=0.092  Sum_probs=116.8

Q ss_pred             hhhhhheeecccchhhhhhhchhhhhhhccCCCCCCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcC
Q 020634           68 VKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENNQNINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITG  147 (323)
Q Consensus        68 VRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~~~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~G  147 (323)
                      +.....|+..-..-...+..|++-..++|...+......-|.-+-..||..+..|+..++.|...+..+|..||..-+.+
T Consensus        32 i~~~k~y~~a~~~~~~a~~~f~dal~~~~~~~~~~~~~~~ig~~L~~~~~~~~~i~~~~~~l~~~~~~~~i~PL~~~~~~  111 (248)
T d1y2oa1          32 IAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVEL  111 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333344455556666666432211222348888999999999999999999999999999999998875


Q ss_pred             CCccchhhHHHH----HHHHHHHHHHhHHHHHHHHhhhccCC-ChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHH
Q 020634          148 APLEDARHLAQR----YSRMRQEAETQAVEVSKRQQRVREAP-NPENVAKLHAAEARMQELKANMAILGKEAAAALAAIE  222 (323)
Q Consensus       148 aPLEDARhLaqR----YdRmRQEaE~qa~eV~rRq~k~res~-n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVE  222 (323)
                      -|=+ ..+...+    |++.+...+.-..+..+-+.|.+..+ ......|+..++.-+...++.+-.+=.+... .+-++
T Consensus       112 d~k~-i~~~kK~~~k~~k~~~~~l~K~~~~~~k~~kk~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~~~~-~~~~e  189 (248)
T d1y2oa1         112 DSRY-LSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSDGYK-TALTE  189 (248)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence            4322 3333333    44555555655556555555555444 3333456665655555555554333222211 11122


Q ss_pred             HHhHHHH--HHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 020634          223 AQQHRLT--FQRLVAMVEGEKNYHLRIAAILGDVEAEMV  259 (323)
Q Consensus       223 aQQQrlT--lQRLiaMVeaEr~YHqrv~~ILd~l~~EMv  259 (323)
                      . .-|..  +..|.+.++++-+||....++|.++...+-
T Consensus       190 e-rkr~~~lv~~l~~~~~a~~~~~~q~~~~l~~~~~~~~  227 (248)
T d1y2oa1         190 E-RRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQ  227 (248)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            2 23454  389999999999999999999999887653

>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: BAR domain
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=0.00086  Score=55.82  Aligned_cols=158  Identities=8%  Similarity=0.099  Sum_probs=115.4

Q ss_pred             hchhhhhhhccCCCC-CCccchhhHHHHHhhHhhHHHHHHHHHHHHHhhhhhhhHHHHhhcCCCccchhhHHHHHHHHHH
Q 020634           87 KLSEDCCRYGAENNQ-NINENILPKAAAIYGDARKHVEKEQEDFNRLLSSQVLDPLRAMITGAPLEDARHLAQRYSRMRQ  165 (323)
Q Consensus        87 KLaeDc~KYG~en~~-~~~~~~LarAa~~yg~a~~~mEkEre~l~r~L~~QV~ePLRaMv~GaPLEDARhLaqRYdRmRQ  165 (323)
                      .+++--..++..... +.+...+..+-..||.+.+.+...+..|+.-+-..|.+||...+.+. +..++.+..+|++.+.
T Consensus        55 ~f~~~L~~~~~~~~~~~~dd~~~~~~l~~f~~~~~el~~~~~~l~~~~~~~~~~pL~~f~~~d-i~~~ke~kk~fek~~~  133 (268)
T d2elba1          55 LTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERD-LKEILTLKEVFQIASN  133 (268)
T ss_dssp             HHHHHHTTGGGSCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTTH-HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHH
Confidence            344434445544221 12234577788899999999999999999999999999999998764 4788899999999999


Q ss_pred             HHHHhHHHHHHHHhhhccCCChhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhHHH
Q 020634          166 EAETQAVEVSKRQQRVREAPNPENVAKLHAAEARMQELKANMAILGKEAAAALAAIEAQQHRLTFQRLVAMVEGEKNYHL  245 (323)
Q Consensus       166 EaE~qa~eV~rRq~k~res~n~e~~~KLq~AE~Kl~ELks~Ma~LGKEA~aAM~aVEaQQQrlTlQRLiaMVeaEr~YHq  245 (323)
                      +-++......+-. |.+.   ++  ....-|+..|.+.+.+-.-..-+-..+|..++.+....-++.|++.+++.-+||+
T Consensus       134 ~yd~~l~k~~~~~-k~k~---~~--~~~~Ea~~~l~~~r~~f~~~~~d~~~~l~~l~~~k~~~~l~~l~~~~~a~~~ff~  207 (268)
T d2elba1         134 DHDAAINRYSRLS-KKRE---ND--KVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFK  207 (268)
T ss_dssp             HHHHHHHHHHTCC-CC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-ccCC---cc--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998766544332 2221   11  2223456667777777777777888899999998888889999999999999988


Q ss_pred             HHHHHH
Q 020634          246 RIAAIL  251 (323)
Q Consensus       246 rv~~IL  251 (323)
                      ...++|
T Consensus       208 ~~~~~l  213 (268)
T d2elba1         208 MGSENL  213 (268)
T ss_dssp             HHHHHC
T ss_pred             HHHHHH
Confidence            777765

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.87  E-value=2.7e-06  Score=58.65  Aligned_cols=34  Identities=9%  Similarity=0.262  Sum_probs=29.5

Q ss_pred             eeeccCCCcCCccceeeecCCEEEE-EEecCcchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVV-RKVCYISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVV-RqVs~~GWs  319 (323)
                      |+|+++|.++.+.||||..||+|.| .+...+||-
T Consensus         2 aralydf~a~~~~ELs~~~Gd~i~v~~~~~~~~w~   36 (56)
T d1zuua1           2 NKVLYAYVQKDDDEITITPGDKISLVARDTGSGWT   36 (56)
T ss_dssp             CEECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEE
T ss_pred             CEEeeeeCCCCCCEeeECCCCEEEEEEEecCCCcE
Confidence            6899999999999999999999965 566677774

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=1.1e-05  Score=56.29  Aligned_cols=35  Identities=20%  Similarity=0.342  Sum_probs=32.7

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      +++++|+|.++.++||||..||.|.|-...++||-
T Consensus         3 ~v~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   37 (57)
T d1ckaa_           3 YVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWW   37 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEE
T ss_pred             EEEECCCCCcCCcCCcCCCCCCEEEEEEEcCCCeE
Confidence            47899999999999999999999999999999994

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=1.3e-05  Score=55.96  Aligned_cols=36  Identities=31%  Similarity=0.337  Sum_probs=33.5

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ++.+++||.++.++|||+..||.|.|-...+.||..
T Consensus         3 yarAlydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~   38 (57)
T d1utia_           3 WARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWT   38 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             EEEECcCCCCCCcCCcCCCCCCEEEEeEEcCCCEEE
Confidence            578999999999999999999999999999999964

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.63  E-value=1.7e-05  Score=54.92  Aligned_cols=35  Identities=14%  Similarity=0.283  Sum_probs=31.8

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .-++++|++++++|||+..||+|.|-+-.++||-.
T Consensus         3 ~vAl~dy~~~~~~eLs~~~Gd~v~v~~~~~~~Ww~   37 (55)
T d1u06a1           3 VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWK   37 (55)
T ss_dssp             EEECSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             EEECCCCCCCCcCCccCCCCCEEEEeEEcCCCEEE
Confidence            35799999999999999999999999999999953

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=97.62  E-value=1.8e-05  Score=55.41  Aligned_cols=36  Identities=17%  Similarity=0.280  Sum_probs=33.4

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ++.++|+|.+++++||||..||.|.|-..++.||-.
T Consensus         4 ~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~W~~   39 (58)
T d1sema_           4 FVQALFDFNPQESGELAFKRGDVITLINKDDPNWWE   39 (58)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEECSSSSEEE
T ss_pred             EEEECCCCCcCCcCCcCCCCCCEEEEeEEcCCCEEE
Confidence            578999999999999999999999999999999953

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.2e-05  Score=58.73  Aligned_cols=40  Identities=25%  Similarity=0.321  Sum_probs=36.5

Q ss_pred             hhheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          281 AVYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       281 ~~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ...++++|+++|+++.+.||||..||.|.|-....+||-+
T Consensus         8 ~~~~~~rAlydy~a~~~~eLs~~~Gd~i~v~~~~~~~W~~   47 (76)
T d1ujya_           8 SHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWE   47 (76)
T ss_dssp             CCCEEEECCSCBCCSSTTSCCBCSSCCEEESSCCSSSCEE
T ss_pred             CCCEEEEECccCCCCCCCCccCCCCCEEEEeEEcCCCEEE
Confidence            3568999999999999999999999999999988999964

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.59  E-value=2.1e-05  Score=54.64  Aligned_cols=35  Identities=20%  Similarity=0.198  Sum_probs=32.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.|+++|++++++||||..||.|.|-+....||-
T Consensus         2 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   36 (58)
T d1jo8a_           2 WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWW   36 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEEccCCCCCCcCCcCCCCCCEEEEEEEcCCCEE
Confidence            36899999999999999999999999999999994

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.3e-05  Score=56.90  Aligned_cols=35  Identities=20%  Similarity=0.383  Sum_probs=32.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .+.|+++|.++.+.||+|.+||.|.|-.-.+.||-
T Consensus         9 ~~~al~~y~~~~~~eLs~~~Gd~i~Vl~~~~~~Ww   43 (80)
T d1ue9a_           9 IAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWW   43 (80)
T ss_dssp             EEEECSCCCCCSTTBCCCCTTCEEEEEEECSSSEE
T ss_pred             EEEECcCCCCCCCCEeeEcCCCEEEEEEEeCCCeE
Confidence            68999999999999999999999999888889994

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.6e-05  Score=53.85  Aligned_cols=32  Identities=31%  Similarity=0.305  Sum_probs=30.5

Q ss_pred             eccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          288 AIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       288 v~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      |+++|.|+.+.||||..||.|.|-.-+++||-
T Consensus         5 al~~y~a~~~~eLs~~~Gd~v~vl~~~~~gWw   36 (53)
T d1wlpb1           5 AIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWW   36 (53)
T ss_dssp             ECSCBCCCSSSBCCBCTTCEEEEEECCTTSSE
T ss_pred             EeeeECCCCCCEecCCCCCEEEEEeecCCceE
Confidence            89999999999999999999999999999995

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.4e-05  Score=55.49  Aligned_cols=35  Identities=29%  Similarity=0.442  Sum_probs=26.4

Q ss_pred             eeeccCCCcCCccceeeecCCEEE-EEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVV-VRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVV-VRqVs~~GWse  320 (323)
                      |.|+|||.+++++||||+.||+|. +.+-.+.||..
T Consensus         3 a~Alydy~a~~~~ELs~~~Gd~v~v~~~~~~~~W~~   38 (56)
T d1gria1           3 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYK   38 (56)
T ss_dssp             EEECSCBCCCSSSCCCBCTTCEEEC------CCEEE
T ss_pred             EEEeeCCCCCCCCCcCCCCCCEEEEEeccCCCCeEE
Confidence            789999999999999999999995 56656778863

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=4.1e-05  Score=57.39  Aligned_cols=39  Identities=21%  Similarity=0.198  Sum_probs=33.9

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ....+.++++|+++.+.||+|..||.|.|-+....||-+
T Consensus        33 ~~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~~gWw~   71 (98)
T d1udla_          33 PVCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQ   71 (98)
T ss_dssp             CSEEEEESSCCCCSSTTSCCCCTTCEEEECBCCSSSEEB
T ss_pred             CccEEEEccCCCCCCCCEeeEcCCCEEEEeEecCCCeEE
Confidence            345578999999999999999999999998777889954

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.5e-05  Score=52.44  Aligned_cols=36  Identities=19%  Similarity=0.379  Sum_probs=32.8

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      .+.++|+|.++++.|||+..||.|.|=....+||-.
T Consensus         3 yv~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~W~~   38 (56)
T d1gcqa_           3 YVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWK   38 (56)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             EEEECcCCCcCCcCCcCCCCCCEEEEEEecCCCEEE
Confidence            368999999999999999999999999888899953

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.4e-05  Score=53.41  Aligned_cols=35  Identities=23%  Similarity=0.413  Sum_probs=32.3

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..++++|+++.++||||..||+|.|-.....||..
T Consensus         8 v~Aly~y~a~~~~eLsf~~Gd~i~vl~~~~~~Ww~   42 (62)
T d1k4us_           8 VEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLE   42 (62)
T ss_dssp             EECCSCBCCCSSSBCCBCSSCEEEEEEESSSSCEE
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEeEEcCCCEEE
Confidence            46899999999999999999999999999999953

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=5.2e-05  Score=52.98  Aligned_cols=35  Identities=20%  Similarity=0.353  Sum_probs=32.0

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.++++|.++.++||||..||.|.|=.-.++||-.
T Consensus         5 ~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~W~~   39 (58)
T d1uj0a_           5 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQ   39 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSSSEEE
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEeEEeCCCEEE
Confidence            57899999999999999999999998888899953

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=6.7e-05  Score=54.56  Aligned_cols=37  Identities=19%  Similarity=0.197  Sum_probs=32.4

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecCcch
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISF  318 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~~GW  318 (323)
                      .-+.+.|+++|.++.+.||||..||+|.|-+.....|
T Consensus         9 ~~~~~~alydy~a~~~~ELs~~~Gd~i~vl~~~~~ww   45 (74)
T d1j3ta_           9 ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWW   45 (74)
T ss_dssp             CCCEEEESSCBCCCSTTBCCBCTTCEEEEEEECSSEE
T ss_pred             CCeEEEEccCCCCCCCCEecCCCCCEEEEEEccCCeE
Confidence            3467899999999999999999999999999876544

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=3.2e-05  Score=53.97  Aligned_cols=34  Identities=21%  Similarity=0.285  Sum_probs=30.6

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ..++|+|++++++||||..||.|.|-...+.||-
T Consensus         6 ~rAl~df~~~~~~eLs~~~Gd~i~v~~~~~~~W~   39 (60)
T d1arka_           6 FRAMYDYMAADADEVSFKDGDAIINVQAIDEGWM   39 (60)
T ss_dssp             EECCSCCCCSSSSBCCCCTTCEECCSEECSSSEE
T ss_pred             EEECccCCCCCCCCcCCCCCCEEEEEEEcCCCEE
Confidence            4789999999999999999999987777888884

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=3e-05  Score=56.07  Aligned_cols=40  Identities=23%  Similarity=0.222  Sum_probs=34.4

Q ss_pred             hhheeeeeccCCCcCCccceeeecCCEEE-EEEecCcchhh
Q 020634          281 AVYFLAEAIHPFTAASEKELSLGVGDYVV-VRKVCYISFLR  320 (323)
Q Consensus       281 ~~yFlaev~hpf~aese~ELsLsvGDyVV-VRqVs~~GWse  320 (323)
                      ..+..+.++++|.++.+.||+|..||.|. +.+...+||-+
T Consensus         8 ~p~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~   48 (72)
T d1ugva_           8 TPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLE   48 (72)
T ss_dssp             CSCCCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEEE
T ss_pred             CCCEEEEEcccCCCCCCCEecCCCCCEEEEeeccCCCCEEE
Confidence            35677999999999999999999999994 66777789964

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=9.6e-05  Score=50.63  Aligned_cols=32  Identities=19%  Similarity=0.263  Sum_probs=29.6

Q ss_pred             eccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          288 AIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       288 v~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ++|+|+++.++||||..||.|.|=.-.++||-
T Consensus         5 Al~dy~a~~~~eLs~~~Gd~i~v~~~~~~~Ww   36 (57)
T d1efna_           5 ALYDYEAITEDDLSFHKGEKFQILNSSEGDWW   36 (57)
T ss_dssp             ESSCBCCSSTTBCCBCTTCEEEEEECSSCSEE
T ss_pred             ECCCCCCCCcCCcCCCCCCEEEEEEecCCCCE
Confidence            79999999999999999999999888888884

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=9.6e-05  Score=53.10  Aligned_cols=38  Identities=21%  Similarity=0.370  Sum_probs=31.3

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEecC--cchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVCY--ISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs~--~GWs  319 (323)
                      ..+++.++++|.+++++||||..||+|.|-....  .||-
T Consensus         5 ~l~~~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww   44 (71)
T d1u5sa1           5 VLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWW   44 (71)
T ss_dssp             SSSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEE
T ss_pred             ccEEEEECccCCCCCCCEeeECCCCEEEEEEcccCCCCeE
Confidence            4578999999999999999999999997765433  3673

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=7.2e-05  Score=52.19  Aligned_cols=35  Identities=20%  Similarity=0.102  Sum_probs=31.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .|.|+++|.++.++||||..||.|.|-.....+|-
T Consensus         3 ~a~alydf~a~~~~ELs~~~Gd~i~v~~~~~~ww~   37 (59)
T d1i07a_           3 YAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWK   37 (59)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEECGGGCCEEE
T ss_pred             EEEEccCCCCCCCCeeeEcCCCEEEEEEEcCCcEE
Confidence            47899999999999999999999999887776663

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=97.17  E-value=8.2e-05  Score=51.02  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=28.6

Q ss_pred             eeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          287 EAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       287 ev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .++|+|++..++||||..||.|.|-.-+..||-
T Consensus         2 ~Alydy~a~~~~eLs~~~Gd~~~vl~~~~~~Ww   34 (53)
T d2rn8a1           2 IALYDYQTNDPQELALRCDEEYYLLDSSEIHWW   34 (53)
T ss_dssp             EESSCCCCSSTTBCCCCTTCEEEECCCSCSSCE
T ss_pred             EEeeeECCCCCCeeeECCCCEEEEeEEcCCCeE
Confidence            378999999999999999999988776777774

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00013  Score=52.24  Aligned_cols=34  Identities=18%  Similarity=0.232  Sum_probs=29.0

Q ss_pred             eeeccCCCcCCccceeeecCCEEEE-EEecCcchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVV-RKVCYISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVV-RqVs~~GWs  319 (323)
                      +.++|+|+++.+.||||..||.|.| .+....||-
T Consensus         9 ~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~W~   43 (71)
T d1k9aa1           9 CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWY   43 (71)
T ss_dssp             EEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEE
T ss_pred             EEEccCCCCCCCCCccCCCCCEEEEeEeccCCCEE
Confidence            7799999999999999999999955 555666784

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00019  Score=54.83  Aligned_cols=34  Identities=29%  Similarity=0.249  Sum_probs=30.9

Q ss_pred             eeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          287 EAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       287 ev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      -|+++|.++.+.||+|..||.|.|=+-...||-.
T Consensus        18 ~alydy~a~~~dELs~~~Gd~i~Vl~~~~~gWw~   51 (118)
T d1ng2a2          18 VAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWV   51 (118)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEECCTTSEEE
T ss_pred             EECcCCCCCCCCEecCCCCCEEEEeEecCCCeEE
Confidence            4999999999999999999999998888889953

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00014  Score=50.46  Aligned_cols=33  Identities=21%  Similarity=0.253  Sum_probs=27.5

Q ss_pred             eeccCCCcCCccceeeecCCEE-EEEEecCcchh
Q 020634          287 EAIHPFTAASEKELSLGVGDYV-VVRKVCYISFL  319 (323)
Q Consensus       287 ev~hpf~aese~ELsLsvGDyV-VVRqVs~~GWs  319 (323)
                      -|+|+|.|+.+.|||+..||.| |+.+-+..||.
T Consensus         4 vAlydy~a~~~~eLs~~~Gd~i~vl~~~~~~~W~   37 (57)
T d1opka1           4 VALYDFVASGDNTLSITKGEKLRVLGYNHNGEWC   37 (57)
T ss_dssp             EESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEE
T ss_pred             EECccCCCCCcCCcCCCCCCEEEEeEecCCCCEE
Confidence            5899999999999999999999 55555555685

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00011  Score=52.36  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=31.7

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      .-..++|+|.+++++||+|..||.|.|-.-...||-
T Consensus         9 ~~v~Alydy~a~~~~eLs~~~Gd~i~v~~~~~~~Ww   44 (67)
T d1awwa_           9 KKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWW   44 (67)
T ss_dssp             CEEEBSSCCCCSSSSSCCCCSSCEEECCCCCSSSEE
T ss_pred             EEEEECcCCCCCCcCCcCCCCCCEEEEEEEcCCCeE
Confidence            345789999999999999999999999887777884

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=6.8e-05  Score=54.04  Aligned_cols=37  Identities=16%  Similarity=0.134  Sum_probs=33.3

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      +.+.++|+|+++++.||||..||.|.|-.-...||-.
T Consensus         7 ~~v~Aly~f~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~   43 (71)
T d2hspa_           7 CAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWR   43 (71)
T ss_dssp             SCEECCSCCCCSSSSSCCCCTTCEEBSCCCBTTTEEC
T ss_pred             EEEEEcccCCcCCcCCccCCCCCEEEEEEecCCCEEE
Confidence            4689999999999999999999999998888889953

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.0002  Score=51.54  Aligned_cols=36  Identities=22%  Similarity=0.234  Sum_probs=32.1

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ....|+++|.++.+.||+|..||.|.|-.-...||-
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww   43 (74)
T d1wfwa_           8 STMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMC   43 (74)
T ss_dssp             CEEECCSCBCCCSSSCCCBCTTCEEEEEEECTTSEE
T ss_pred             CEEEEeEEECCCCCCCccCccCCEEEEEEEcCCCCE
Confidence            356789999999999999999999999988888883

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.0002  Score=49.55  Aligned_cols=35  Identities=26%  Similarity=0.287  Sum_probs=31.8

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchhh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFLR  320 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWse  320 (323)
                      ..|+++|.++.+.|||+..||.|.|=+-.++||-.
T Consensus         5 ~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~~Ww~   39 (58)
T d1ng2a1           5 YRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWF   39 (58)
T ss_dssp             EECSSCBCCSSTTCCCBCTTCEEEEEECCTTSCCE
T ss_pred             EEECccCcCCCCCCcCCCCCCEEEEEEecCCCeEE
Confidence            46899999999999999999999998888899953

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.00  E-value=0.00024  Score=49.43  Aligned_cols=34  Identities=21%  Similarity=0.319  Sum_probs=28.8

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEec--Ccchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVC--YISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWs  319 (323)
                      +.++++|.++.+.||||..||.|.|-.-.  +.||-
T Consensus         4 ~~Alydy~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~   39 (58)
T d1oota_           4 AVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWW   39 (58)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEE
T ss_pred             EEEccCCCCCCCCCccCCCCCEEEEEEeecCCCCEE
Confidence            67999999999999999999999776543  45774

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00026  Score=49.26  Aligned_cols=34  Identities=15%  Similarity=0.287  Sum_probs=30.1

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcch
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISF  318 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GW  318 (323)
                      +..++++|+++.++||+|..||.|.|=.-...+|
T Consensus         8 ~~~al~dy~a~~~~eLs~~~Gd~i~v~~~~~~ww   41 (62)
T d2iima1           8 LVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWW   41 (62)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSSEE
T ss_pred             EEEECCCCCcCCcCCcCCCCCCEEEEeEEcCCCE
Confidence            3678999999999999999999999888777666

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00028  Score=49.48  Aligned_cols=34  Identities=24%  Similarity=0.279  Sum_probs=29.3

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEEEecCcch
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVRKVCYISF  318 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVRqVs~~GW  318 (323)
                      +..++|+|.++.++||+|..||.|.|-+-++.+|
T Consensus         6 ~vvAlydy~~~~~~eLs~~~Gd~i~v~~~~~~ww   39 (65)
T d1qcfa1           6 IVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWW   39 (65)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCTTEE
T ss_pred             EEEECCcCCCCCcCccCCCCCCEEEEEEECCCCE
Confidence            4567999999999999999999999988665544

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.94  E-value=0.00034  Score=49.82  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=29.2

Q ss_pred             heeeeeccCCCcCC-ccceeeecCCEEEE-EEec----Ccchh
Q 020634          283 YFLAEAIHPFTAAS-EKELSLGVGDYVVV-RKVC----YISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aes-e~ELsLsvGDyVVV-RqVs----~~GWs  319 (323)
                      ..++.|+++|.+.+ +.||||..||.|.| .+..    +.||-
T Consensus         5 ~~~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww   47 (67)
T d2v1ra1           5 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWW   47 (67)
T ss_dssp             CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEE
T ss_pred             CEEEEECccCCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeE
Confidence            34699999999976 57999999998855 5654    36885

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00049  Score=50.29  Aligned_cols=35  Identities=17%  Similarity=0.139  Sum_probs=28.6

Q ss_pred             eeeeccCCCcCCccceeeecCCEEEEE-Eec---Ccchh
Q 020634          285 LAEAIHPFTAASEKELSLGVGDYVVVR-KVC---YISFL  319 (323)
Q Consensus       285 laev~hpf~aese~ELsLsvGDyVVVR-qVs---~~GWs  319 (323)
                      +..++++|.++.+.||||.+||.|.|= ++.   ..||-
T Consensus        15 ~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~   53 (79)
T d1uhca_          15 VYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWW   53 (79)
T ss_dssp             CEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEE
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEEEeecCCCCCCEE
Confidence            456899999999999999999999764 443   46884

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0002  Score=50.27  Aligned_cols=32  Identities=16%  Similarity=0.255  Sum_probs=28.7

Q ss_pred             eccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          288 AIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       288 v~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      ++|+|+++.++||++..||.|.|=.-...||-
T Consensus         7 Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww   38 (64)
T d1fmka1           7 ALYDYESRTETDLSFKKGERLQIVNNTEGDWW   38 (64)
T ss_dssp             ESSCBCCCSSSBCCBCTTCEEEESCCCSSSEE
T ss_pred             ECccCCCcCcCCcCCCCCCEEEEEEEcCCCcE
Confidence            69999999999999999999998777777774

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00038  Score=49.34  Aligned_cols=34  Identities=18%  Similarity=0.264  Sum_probs=30.8

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -.++++|.+..++||||..||.|.|-.-.+.||-
T Consensus         5 v~Alydf~a~~~~eLs~~~Gd~i~v~~~~~~~Ww   38 (67)
T d1gl5a_           5 VVAMYDFQATEAHDLRLERGQEYIILEKNDLHWW   38 (67)
T ss_dssp             EEECSCBCCSSSSBCCBCTTCEEEEEECSSSSEE
T ss_pred             EEECCCCCCCCcCCcCCCCCCEEEEEEecCCCcE
Confidence            3579999999999999999999999888888885

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.77  E-value=0.00041  Score=51.03  Aligned_cols=38  Identities=34%  Similarity=0.446  Sum_probs=31.8

Q ss_pred             hheeeeeccCCCcCCccceeeecCCEEEEEEec-----Ccchh
Q 020634          282 VYFLAEAIHPFTAASEKELSLGVGDYVVVRKVC-----YISFL  319 (323)
Q Consensus       282 ~yFlaev~hpf~aese~ELsLsvGDyVVVRqVs-----~~GWs  319 (323)
                      ..|.+.++++|.+++++||||..||.|.|=.-.     ..||-
T Consensus        11 ~~~~~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw   53 (83)
T d1bb9a_          11 FMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWL   53 (83)
T ss_dssp             CCEEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEE
T ss_pred             CCEEEEEceeECCCCCCEecCcCCCEEEEEEccCCCcccCCEe
Confidence            447799999999999999999999999986543     35774

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00038  Score=53.10  Aligned_cols=37  Identities=24%  Similarity=0.295  Sum_probs=29.8

Q ss_pred             eeeeeccCCCcC------CccceeeecCCEEE-EEEecCcchhh
Q 020634          284 FLAEAIHPFTAA------SEKELSLGVGDYVV-VRKVCYISFLR  320 (323)
Q Consensus       284 Flaev~hpf~ae------se~ELsLsvGDyVV-VRqVs~~GWse  320 (323)
                      -+..++++|+++      +|+||+|..||+|. |.++.++||-.
T Consensus        18 ~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~   61 (96)
T d1wiea_          18 HLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYE   61 (96)
T ss_dssp             EEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCE
T ss_pred             eEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEE
Confidence            355589999875      47999999999984 56788899964

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00044  Score=51.94  Aligned_cols=35  Identities=34%  Similarity=0.207  Sum_probs=28.9

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEE-ec---Ccch
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRK-VC---YISF  318 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRq-Vs---~~GW  318 (323)
                      .+..|+|+|.++.+.||||..||.|.|-+ -.   .+||
T Consensus        18 ~~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~W   56 (92)
T d1ug1a_          18 KLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNR   56 (92)
T ss_dssp             GEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSE
T ss_pred             eEEEEcCCcCCCCCCeEEEecccEEEEEEcccccccCCc
Confidence            35689999999999999999999996654 33   3678

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00037  Score=49.22  Aligned_cols=34  Identities=18%  Similarity=0.318  Sum_probs=27.6

Q ss_pred             eeeccCCCcCCccceeeecCCEEEEE-Eec--Ccchh
Q 020634          286 AEAIHPFTAASEKELSLGVGDYVVVR-KVC--YISFL  319 (323)
Q Consensus       286 aev~hpf~aese~ELsLsvGDyVVVR-qVs--~~GWs  319 (323)
                      ..++|+|.++++.|||+..||.|.|= +..  .+||-
T Consensus         7 v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~   43 (63)
T d1ycsb2           7 IYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWW   43 (63)
T ss_dssp             EEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEE
T ss_pred             EEEeeCCCCCCCCCcCCCCCCEEEEEEecCCCCCCEE
Confidence            34799999999999999999999774 443  34885

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00023  Score=53.21  Aligned_cols=30  Identities=23%  Similarity=0.443  Sum_probs=27.5

Q ss_pred             eeeeeccCCCcCCccceeeecCCEEEEEEe
Q 020634          284 FLAEAIHPFTAASEKELSLGVGDYVVVRKV  313 (323)
Q Consensus       284 Flaev~hpf~aese~ELsLsvGDyVVVRqV  313 (323)
                      |...++++|.++.++||+|..||.|.|-+-
T Consensus         4 ~~~raly~y~~~~~~eLs~~~Gd~i~V~~~   33 (83)
T d1phta_           4 YQYRALYDYKKEREEDIDLHLGDILTVNKG   33 (83)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEHH
T ss_pred             CEEEEcCccCCCCCCcccccCCCEEEEEec
Confidence            567899999999999999999999999864

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.39  E-value=0.00073  Score=48.56  Aligned_cols=35  Identities=26%  Similarity=0.299  Sum_probs=29.4

Q ss_pred             eeeeccCCCcC-CccceeeecCCEEEE-EEecCcchh
Q 020634          285 LAEAIHPFTAA-SEKELSLGVGDYVVV-RKVCYISFL  319 (323)
Q Consensus       285 laev~hpf~ae-se~ELsLsvGDyVVV-RqVs~~GWs  319 (323)
                      ...++++|.++ .+.||+|..||.|.| .+..++||-
T Consensus         9 ~~~Alydy~~~~~~deLsf~~Gd~i~vl~~~~~~gW~   45 (72)
T d1spka_           9 KVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWL   45 (72)
T ss_dssp             EEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEE
T ss_pred             EEEEeeccCCCCCCCEeeEcCCCEEEEEEeecCCCeE
Confidence            35899999986 468999999999966 677888995

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0011  Score=48.52  Aligned_cols=34  Identities=29%  Similarity=0.459  Sum_probs=28.3

Q ss_pred             eeccCCCcCCccceeeecCCEEEEEEec--Ccchhh
Q 020634          287 EAIHPFTAASEKELSLGVGDYVVVRKVC--YISFLR  320 (323)
Q Consensus       287 ev~hpf~aese~ELsLsvGDyVVVRqVs--~~GWse  320 (323)
                      +|+++|.++++.||+|..||+|.|=.-.  ..||..
T Consensus         9 rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~   44 (93)
T d1uffa_           9 RALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLY   44 (93)
T ss_dssp             EESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEE
T ss_pred             EECccCCCCCCCCccCcCCCEEEEEEeccCCCCEEE
Confidence            8999999999999999999999886443  356753

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0014  Score=47.03  Aligned_cols=32  Identities=16%  Similarity=0.334  Sum_probs=27.7

Q ss_pred             eeccCCCcCCccceeeecCCEEEEEEecCcchh
Q 020634          287 EAIHPFTAASEKELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       287 ev~hpf~aese~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      -++|+|.++.++||||..||.|.|=+..+ ||-
T Consensus        12 vAl~~y~~~~~~eLs~~~Gd~v~vl~~~~-~Ww   43 (69)
T d1uhfa_          12 IALYPYSSVEPGDLTFTEGEEILVTQKDG-EWW   43 (69)
T ss_dssp             ECSSCBCCSSSSBCCBCTTCEEEECEEET-TEE
T ss_pred             EECccCCCCCcCCcCCCCCCEEEEEEecC-CEE
Confidence            36999999999999999999999987754 673

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.89  E-value=0.0017  Score=46.79  Aligned_cols=32  Identities=25%  Similarity=0.232  Sum_probs=25.8

Q ss_pred             ccCCCcCCccceeeecCCEEEE-EEecCcchhh
Q 020634          289 IHPFTAASEKELSLGVGDYVVV-RKVCYISFLR  320 (323)
Q Consensus       289 ~hpf~aese~ELsLsvGDyVVV-RqVs~~GWse  320 (323)
                      +-||.++..+||||..||.|.| ++-..+||-+
T Consensus        16 ~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~   48 (69)
T d1gcqc_          16 IPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWE   48 (69)
T ss_dssp             SSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEE
T ss_pred             cCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEE
Confidence            4577778999999999999955 6666789964

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0051  Score=47.26  Aligned_cols=38  Identities=21%  Similarity=0.133  Sum_probs=31.0

Q ss_pred             hhheeeeeccCCCcCCccceeeecCCEEEEEEe---cCcch
Q 020634          281 AVYFLAEAIHPFTAASEKELSLGVGDYVVVRKV---CYISF  318 (323)
Q Consensus       281 ~~yFlaev~hpf~aese~ELsLsvGDyVVVRqV---s~~GW  318 (323)
                      .....|.++++|.+.+++||+|..||.|.|-.-   ...||
T Consensus        19 ~~~~~~~Alydy~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~W   59 (106)
T d1i1ja_          19 HPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLF   59 (106)
T ss_dssp             SCSEEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTE
T ss_pred             ceeeEEEEccccCCCCCCCccCCCCCEEEEEEecCCCCcce
Confidence            344679999999999999999999999988653   33456

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.41  E-value=0.0086  Score=44.02  Aligned_cols=36  Identities=19%  Similarity=0.326  Sum_probs=29.9

Q ss_pred             eeeeeccCCCcCCc-----cceeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASE-----KELSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese-----~ELsLsvGDyVVVRqVs~~GWs  319 (323)
                      |.-.++++|+++.+     .|||+..||.|.|-.-...||-
T Consensus         2 ~~vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~~d~~WW   42 (96)
T d1kjwa1           2 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWW   42 (96)
T ss_dssp             EEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEE
T ss_pred             EEEEEcccCcCCcCCCCCCccceEcCCCEEEEeeeccCceE
Confidence            66789999999874     5999999999977776677883

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.00  E-value=0.034  Score=42.59  Aligned_cols=37  Identities=19%  Similarity=0.328  Sum_probs=32.6

Q ss_pred             heeeeeccCCCcCCccc-------eeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKE-------LSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~E-------LsLsvGDyVVVRqVs~~GWs  319 (323)
                      -|...+++.|++..+.|       ||+..||+|.|=.-..+||-
T Consensus        21 ~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW   64 (96)
T d1t0ha_          21 AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWW   64 (96)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEE
T ss_pred             cEEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCce
Confidence            47899999999999999       99999999988777777883

>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: FCH domain
domain: Formin-binding protein 1, FNBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=1.7  Score=34.37  Aligned_cols=204  Identities=15%  Similarity=0.160  Sum_probs=104.2

Q ss_pred             HHHHHHhhhhchhhhhHHHhhhhhheeecccchhhhhhhchhhhhhhccCCC---CCCccchhhHHHHHhhHhhHHHHHH
Q 020634           49 QLEKLYRSTRGTKDFQRDLVKVAEVFTAIGYKHIEAGTKLSEDCCRYGAENN---QNINENILPKAAAIYGDARKHVEKE  125 (323)
Q Consensus        49 ~LekLY~STRaaKhFQrdIVRgvEGfis~gsKq~Ei~~KLaeDc~KYG~en~---~~~~~~~LarAa~~yg~a~~~mEkE  125 (323)
                      +++.|+.=+..|..+=.+|..=+.--..+   -.|-+.+|..=|.+|.....   ....+.++.++-..+-..-..+=..
T Consensus        10 ~~~~l~~~~~~~~~~~~~~~~~~~eRa~i---E~eYak~L~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   86 (288)
T d2efla1          10 QFDNLEKHTQWGIDILEKYIKFVKERTEI---ELSYAKQLRNLSKKYQPKKNSKEEEEYKYTSCKAFISNLNEMNDYAGQ   86 (288)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTSCC-------CTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhhccccccccccCcHHHHHHHHHHHHHHHHHH
Confidence            34455555555555554444333221111   12345566666777753211   1122335667766666666666677


Q ss_pred             HHHHHHHhhhhhhhHHHHhhcC--------------------CCccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhccCC
Q 020634          126 QEDFNRLLSSQVLDPLRAMITG--------------------APLEDARHLAQRYSRMRQEAETQAVEVSKRQQRVREAP  185 (323)
Q Consensus       126 re~l~r~L~~QV~ePLRaMv~G--------------------aPLEDARhLaqRYdRmRQEaE~qa~eV~rRq~k~res~  185 (323)
                      +.++-..|.++|.+||+.++.-                    .-.....-...+|++...|+|.......+......  .
T Consensus        87 h~~~a~~l~~~i~~~l~~~~~~~~~~~K~~~~~~~k~~k~~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~~~--~  164 (288)
T d2efla1          87 HEVISENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADIN--V  164 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT--S
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--c
Confidence            8888889999999999887631                    11112333445666666666655554444332211  1


Q ss_pred             Chhhhhh----hHHHHHHHHH----HHHHHHHhcHHH----HHHHHHHHHHhHHHHHHHHHHHH-------HhhhhHHHH
Q 020634          186 NPENVAK----LHAAEARMQE----LKANMAILGKEA----AAALAAIEAQQHRLTFQRLVAMV-------EGEKNYHLR  246 (323)
Q Consensus       186 n~e~~~K----Lq~AE~Kl~E----Lks~Ma~LGKEA----~aAM~aVEaQQQrlTlQRLiaMV-------eaEr~YHqr  246 (323)
                      ++....|    ++.+..++.+    .+..+..+-+.=    ...|..+-.+-|.+-.+|+..|.       ..+..++..
T Consensus       165 ~~~~~~K~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~~q~~e~~r~~~~k~~l~~~~~~~~~~~~~  244 (288)
T d2efla1         165 TKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRIVRMGESMKTYAEVDRQVIPI  244 (288)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            3333333    2333333332    223333322110    13355555566666666666554       456666666


Q ss_pred             HHHHHHHHHHH
Q 020634          247 IAAILGDVEAE  257 (323)
Q Consensus       247 v~~ILd~l~~E  257 (323)
                      +...++.|...
T Consensus       245 ~~~~~~~l~~~  255 (288)
T d2efla1         245 IGKCLDGIVKA  255 (288)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666666554

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.87  E-value=0.046  Score=43.16  Aligned_cols=36  Identities=11%  Similarity=0.316  Sum_probs=33.4

Q ss_pred             eeeeeccCCCcCCccc-------eeeecCCEEEEEEecCcchh
Q 020634          284 FLAEAIHPFTAASEKE-------LSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       284 Flaev~hpf~aese~E-------LsLsvGDyVVVRqVs~~GWs  319 (323)
                      |.-.+++.|++..+++       |++..||+|.|-....+||=
T Consensus        24 f~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW   66 (145)
T d1vyva1          24 FAVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWW   66 (145)
T ss_dssp             EEEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTEE
T ss_pred             EEEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCcE
Confidence            7789999999999998       99999999999998888984

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.67  E-value=0.32  Score=38.57  Aligned_cols=37  Identities=8%  Similarity=0.244  Sum_probs=33.4

Q ss_pred             heeeeeccCCCcCCccc-------eeeecCCEEEEEEecCcchh
Q 020634          283 YFLAEAIHPFTAASEKE-------LSLGVGDYVVVRKVCYISFL  319 (323)
Q Consensus       283 yFlaev~hpf~aese~E-------LsLsvGDyVVVRqVs~~GWs  319 (323)
                      -|.-.+++.|++..+.+       ||+..||++-|-.-..++|=
T Consensus        23 ~~~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW   66 (136)
T d1vyua1          23 AFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWW   66 (136)
T ss_dssp             CEEEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEE
T ss_pred             eEEEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcE
Confidence            38889999999999888       99999999999888888883