Citrus Sinensis ID: 020650
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LZG0 | 345 | Adenosine kinase 2 OS=Ara | yes | no | 0.990 | 0.927 | 0.784 | 1e-159 | |
| Q9SF85 | 344 | Adenosine kinase 1 OS=Ara | no | no | 0.990 | 0.930 | 0.778 | 1e-156 | |
| O49923 | 343 | Adenosine kinase OS=Physc | N/A | no | 0.996 | 0.938 | 0.632 | 1e-123 | |
| P55264 | 361 | Adenosine kinase OS=Mus m | yes | no | 0.990 | 0.886 | 0.567 | 1e-112 | |
| Q64640 | 361 | Adenosine kinase OS=Rattu | yes | no | 0.990 | 0.886 | 0.570 | 1e-112 | |
| P55263 | 362 | Adenosine kinase OS=Homo | no | no | 0.993 | 0.886 | 0.551 | 1e-110 | |
| P55262 | 361 | Adenosine kinase OS=Crice | yes | no | 0.990 | 0.886 | 0.564 | 1e-109 | |
| P78825 | 340 | Adenosine kinase OS=Schiz | yes | no | 0.962 | 0.914 | 0.429 | 2e-68 | |
| Q54MB5 | 340 | Adenosine kinase OS=Dicty | yes | no | 0.959 | 0.911 | 0.423 | 2e-67 | |
| P47143 | 340 | Adenosine kinase OS=Sacch | yes | no | 0.941 | 0.894 | 0.395 | 3e-58 |
| >sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 560 bits (1444), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/338 (78%), Positives = 299/338 (88%), Gaps = 18/338 (5%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGGA 45
+GILLGMGNPLLDIS+VVDD+FL KYD EM+SK+NVEYIAGGA
Sbjct: 8 DGILLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGGA 67
Query: 46 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 105
TQNSI+VAQWMLQIPGATSY+G IGKDK+GE MKK++ AGVNVHYYEDESA TGTC VC
Sbjct: 68 TQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGVC 127
Query: 106 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 165
VVGGERSL+ANLSAANCYK +HLKKPENWALVEKAK++YIAGFFLTVSP+SIQLV+EHAA
Sbjct: 128 VVGGERSLIANLSAANCYKVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHAA 187
Query: 166 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225
ANNKVF MNLSAPFICEFFKD EK LPYMD++FGNETEARTFS+V GWET+DVE+IA+K
Sbjct: 188 ANNKVFTMNLSAPFICEFFKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAIK 247
Query: 226 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285
+SQ PKA+ KRT VITQGADPVVVA+DGK+KK+PVI LPK+KLVDTNGAGDAFVGGF+
Sbjct: 248 ISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFM 307
Query: 286 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
SQLV+EK IEECV+AGCY S+V+IQRSGCTYPEKP+FN
Sbjct: 308 SQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 0 |
| >sp|Q9SF85|ADK1_ARATH Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/338 (77%), Positives = 292/338 (86%), Gaps = 18/338 (5%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGGA 45
+GILLGMGNPLLD+S+VVD FL+KYD EM+ K+NVEYIAGGA
Sbjct: 7 DGILLGMGNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAGGA 66
Query: 46 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 105
TQNSI+VAQWMLQ+PGATSY+G IGKDK+GE MKK++ AGV VHYYEDE+ TGTC VC
Sbjct: 67 TQNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVC 126
Query: 106 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 165
V+GGERSL+ANLSAANCYK EHLKKPENWALVEKAK++YIAGFFLTVSP+SIQLV EHAA
Sbjct: 127 VLGGERSLIANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHAA 186
Query: 166 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225
ANNKVF MNLSAPFICEFFKD EK LPYMDYIFGNETEARTFS+V GWETDDVE+IA+K
Sbjct: 187 ANNKVFTMNLSAPFICEFFKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAIK 246
Query: 226 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285
+SQ PKAS KRT VITQGADPVVVA+DGK+KK+PVI LPK+KLVDTNGAGDAFVGGFL
Sbjct: 247 MSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFL 306
Query: 286 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
SQLV K IEECVRAGCY S+V+IQRSGCTYPEKP+FN
Sbjct: 307 SQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/340 (63%), Positives = 256/340 (75%), Gaps = 18/340 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIA 42
MA EG+LLGMGNPLLDIS VVDD FL KY E+A+ +VEYIA
Sbjct: 1 MASEGVLLGMGNPLLDISCVVDDAFLEKYGLTLNNAILAEDKHLPMYKELAANPDVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQN+IR+AQWML ATSY GC+GKD++G+ M K + GVN+ Y DE TGTC
Sbjct: 61 GGATQNTIRIAQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDEDLPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
V VV GERSLVANLSAAN YK +HLKKPENWA VEKAKY Y AGFFLTVSP+S+ VA+
Sbjct: 121 GVLVVKGERSLVANLSAANKYKIDHLKKPENWAFVEKAKYIYSAGFFLTVSPESMMTVAK 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAA K +M+NL+APFIC+FFKD L ++ PY+D+IFGNE+EAR F++VQGWET+D + I
Sbjct: 181 HAAETGKYYMINLAAPFICQFFKDPLMELFPYVDFIFGNESEARAFAQVQGWETEDTKVI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
A+KL+ PKA KR AVITQG DP +VA+DGK+ +FPV +PK+KLVDTN AGD+FVG
Sbjct: 241 AVKLAALPKAGGTHKRVAVITQGTDPTIVAEDGKVTEFPVTPIPKEKLVDTNAAGDSFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 322
GFLSQLV K I +CVRAG Y + VIIQRSGCT+P KP F
Sbjct: 301 GFLSQLVLGKDIAQCVRAGNYAASVIIQRSGCTFPSKPSF 340
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Can also act on the cytokinin isopentenyladenosine to produce isopentenyladenosine monophosphate. Physcomitrella patens subsp. patens (taxid: 145481) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55264|ADK_MOUSE Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2 | Back alignment and function description |
|---|
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/340 (56%), Positives = 249/340 (73%), Gaps = 20/340 (5%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIAGGA 45
E +L GMGNPLLDIS+VVD DFL+KY DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 46 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 104
TQNS++VAQW++Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 82 TQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 105 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163
C+ GG RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 223
AA NN+VF +NLSAPFI +FFK+AL V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 224 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283
K PK + R+RT + TQG D +VA + + FPV+ +++++DTNGAGDAFVGG
Sbjct: 262 KKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGG 321
Query: 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
FLSQLV +KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q64640|ADK_RAT Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3 | Back alignment and function description |
|---|
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/340 (57%), Positives = 246/340 (72%), Gaps = 20/340 (5%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIAGGA 45
E +L GMGNPLLDIS+VVD DFL+KY DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 46 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 104
TQNS++VAQWM+Q P A ++ GCIG DKFGE +K + A V+ HYYE TGTCA
Sbjct: 82 TQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 105 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163
C+ GG RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLENNWMLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 223
AA NN+ F +NLSAPFI +FFK+AL +V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 224 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283
K PK + R+RT + TQG D +VA + FPV+ ++++VDTNGAGDAFVGG
Sbjct: 262 RKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGG 321
Query: 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
FLSQLV KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55263|ADK_HUMAN Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/341 (55%), Positives = 248/341 (72%), Gaps = 20/341 (5%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIAGG 44
+E IL GMGNPLLDIS+VVD DFL+KY DE+ K+ VEY AGG
Sbjct: 22 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 81
Query: 45 ATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCA 103
+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 82 STQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCA 141
Query: 104 VCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
C+ G RSL+ANL+AANCYK E HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 142 ACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAH 201
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++EI
Sbjct: 202 HASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 261
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
A K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFVG
Sbjct: 262 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 321
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 322 GFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 362
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55262|ADK_CRIGR Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 244/340 (71%), Gaps = 20/340 (5%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIAGGA 45
E +L GMGNPLLDIS+VVD DFL+KY DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVRKFKVEYHAGGS 81
Query: 46 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 104
TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K + A V+ HYYE TGTCA
Sbjct: 82 TQNSIKVAQWMIQKPHKAATFFGCIGIDKFGEILKSKAAEAHVDAHYYEQNEQPTGTCAA 141
Query: 105 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163
C+ G RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGDNRSLVANLAAANCYKKEKHLDLENNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 223
AA NN++F +NLSAPFI +FFK++L +V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRIFTLNLSAPFISQFFKESLMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 224 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283
K K + R RT V TQG D VVA + ++ F V+ + +++DTNGAGDAFVGG
Sbjct: 262 KKAQALAKVNSKRPRTVVFTQGRDDTVVATENEVMAFAVLDQNQKEIIDTNGAGDAFVGG 321
Query: 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
FLSQLV KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVYNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Cricetulus griseus (taxid: 10029) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P78825|ADK_SCHPO Adenosine kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ado1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 259 bits (661), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 201/328 (61%), Gaps = 17/328 (5%)
Query: 6 ILLGMGNPLLDISSVVDDDFLNKYD------EMASKYN--------VEYIAGGATQNSIR 51
IL G+ NPLLD + L KY +AS+ V Y AGGA QNS R
Sbjct: 5 ILFGLENPLLDYYVGGETATLEKYGLKSNDAVLASESQMGIYKEPCVSYSAGGAAQNSCR 64
Query: 52 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGE- 110
AQ++L P +T + GC+G+DKF + + ++++ AG+ + D + TG CAV +
Sbjct: 65 AAQYVLP-PNSTVFAGCVGQDKFADMLLESNEKAGLRSEFSVDPTTPTGVCAVVLSNNNK 123
Query: 111 -RSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK 169
RSL NL AAN YK + L++P W VE+AK Y+ GF LTVSP+S+ +A+HA NNK
Sbjct: 124 NRSLCTNLGAANNYKLKDLQQPNVWKFVEEAKVIYVGGFHLTVSPESMLCLAQHANENNK 183
Query: 170 VFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
++MNLSAPF+ +FFK+ ++ V+PY DY+ GNE E ++ + G ++ DV+EIAL LS
Sbjct: 184 PYIMNLSAPFLSQFFKEQMDSVIPYCDYVIGNEAEILSYGENHGIKSTDVQEIALALSSV 243
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289
K ++ R R VITQGAD +VA+DGK+ + +P +++VDTNGAGDAF GGF++ L
Sbjct: 244 EKVNKKRTRVVVITQGADATIVAKDGKVTTYKPNRVPSEEIVDTNGAGDAFAGGFIAALS 303
Query: 290 QEKPIEECVRAGCYTSHVIIQRSGCTYP 317
Q + I+ V G + I+ SG T P
Sbjct: 304 QGQGIDYAVTLGHWLGQECIKVSGTTLP 331
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q54MB5|ADK_DICDI Adenosine kinase OS=Dictyostelium discoideum GN=adk PE=3 SV=2 | Back alignment and function description |
|---|
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 193/328 (58%), Gaps = 18/328 (5%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKY-----------DEMASKY------NVEYIAGGATQNS 49
+L GNPLLD+S+ V+ L+KY D+ Y VEYI GGA QN+
Sbjct: 6 ILCAGNPLLDLSTHVEMAILDKYELKLGNAILAEDKHLPLYGEIKSGKVEYIPGGAAQNT 65
Query: 50 IRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGG 109
RV QWML+ Y GC+G D+ +K ++ GV Y D SA TG CAV +
Sbjct: 66 SRVCQWMLKDKQTVCYTGCVGTDENATILKTATESNGVVTKYQVDSSAPTGACAVLINHK 125
Query: 110 ERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK 169
ERS+V NL AAN +K H + E A+V A++FY+ G+FLTVSPDS + +HAA N+K
Sbjct: 126 ERSMVTNLGAANNFKIAHFQTEEMKAIVNSAQFFYLVGYFLTVSPDSAVHLGKHAAENDK 185
Query: 170 VFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
F+ L+APF+ +FF D + ++LPY+D +F NE+EA T + W +D+ IA KL+ W
Sbjct: 186 PFLYGLAAPFLIDFFFDKVSELLPYVDIVFANESEAATLGRKMNW-GEDLTVIAEKLAAW 244
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289
K + R RT V TQG D +V Q+G L K+ I + + ++D N AGD+F GGFL+
Sbjct: 245 EKVNTKRTRTVVFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAYS 304
Query: 290 QEKPIEECVRAGCYTSHVIIQRSGCTYP 317
+ I +CV AG Y S II+++G T P
Sbjct: 305 NGQEIAKCVEAGHYASWEIIRQNGATVP 332
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P47143|ADK_YEAST Adenosine kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 225 bits (573), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 183/339 (53%), Gaps = 35/339 (10%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKY----------------------DEMASKYNVEYIAGG 44
L+ +GNPLLD + V ++L KY DE+ + +AGG
Sbjct: 5 LVVLGNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGG 64
Query: 45 ATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 104
A QN+ R A ++L G Y G +GKDKF E + ++ AGV Y TG CA
Sbjct: 65 AAQNTARGAAYVLG-AGQVVYFGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAA 123
Query: 105 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164
+ G RSLV +L AAN + +HL K +W LVE AK FYI GF LTVSPD+I + +HA
Sbjct: 124 LITGHNRSLVTDLGAANFFTPDHLDK--HWDLVEAAKLFYIGGFHLTVSPDAIVKLGQHA 181
Query: 165 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD----DVE 220
N+K F++N SAPFI FKDAL +VLPY I NE+EA F ++ D D+E
Sbjct: 182 KENSKPFVLNFSAPFIPHVFKDALARVLPYATVIIANESEAEAF--CDAFQLDCANTDLE 239
Query: 221 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 280
IA ++ K S + K T + T G +P VV +PV L K+VDTNGAGDAF
Sbjct: 240 AIAQRIV---KDSPVEK-TVIFTHGVEPTVVVSSKGTSTYPVKPLDSSKIVDTNGAGDAF 295
Query: 281 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319
GGF++ L + + +E + G + + + IQ G +YP +
Sbjct: 296 AGGFMAGLTKGEDLETSIDMGQWLAALSIQEVGPSYPSE 334
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. ADO1 does not play a major role in adenine utilization in yeast. Its physiological role could primarily be to recycle adenosine produced by the methyl cycle. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| 225449018 | 341 | PREDICTED: adenosine kinase 2 [Vitis vin | 1.0 | 0.947 | 0.844 | 1e-169 | |
| 225449016 | 341 | PREDICTED: adenosine kinase 2 [Vitis vin | 1.0 | 0.947 | 0.841 | 1e-169 | |
| 357440379 | 341 | Adenosine kinase [Medicago truncatula] g | 1.0 | 0.947 | 0.826 | 1e-165 | |
| 388514649 | 341 | unknown [Medicago truncatula] | 1.0 | 0.947 | 0.824 | 1e-165 | |
| 217073276 | 341 | unknown [Medicago truncatula] | 0.993 | 0.941 | 0.828 | 1e-165 | |
| 255581753 | 342 | adenosine kinase, putative [Ricinus comm | 0.990 | 0.935 | 0.831 | 1e-165 | |
| 224109788 | 341 | predicted protein [Populus trichocarpa] | 0.996 | 0.944 | 0.832 | 1e-164 | |
| 224100781 | 341 | predicted protein [Populus trichocarpa] | 1.0 | 0.947 | 0.818 | 1e-164 | |
| 296086001 | 332 | unnamed protein product [Vitis vinifera] | 0.972 | 0.945 | 0.840 | 1e-164 | |
| 296086003 | 332 | unnamed protein product [Vitis vinifera] | 0.972 | 0.945 | 0.843 | 1e-164 |
| >gi|225449018|ref|XP_002272669.1| PREDICTED: adenosine kinase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/341 (84%), Positives = 306/341 (89%), Gaps = 18/341 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIA 42
MA EGILLGMGNPLLDISSVVD++FL KYD EMASKYNVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISSVVDEEFLQKYDIKLNNAILAEDKHLPMYDEMASKYNVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSIRV QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTC
Sbjct: 61 GGATQNSIRVCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWETD+VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
A+K+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLVQEKPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449016|ref|XP_002272337.1| PREDICTED: adenosine kinase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/341 (84%), Positives = 306/341 (89%), Gaps = 18/341 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIA 42
MA EGILLGMGNPLLDISSVVD++FL +YD EMASKYNVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISSVVDEEFLQRYDIKLNNAILAEDKHLPMYDEMASKYNVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSIRV QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTC
Sbjct: 61 GGATQNSIRVCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFS+V GWETD+VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFSRVHGWETDNVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
A+K+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLVQEKPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357440379|ref|XP_003590467.1| Adenosine kinase [Medicago truncatula] gi|355479515|gb|AES60718.1| Adenosine kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/341 (82%), Positives = 304/341 (89%), Gaps = 18/341 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNK------------------YDEMASKYNVEYIA 42
MA EG+LLGMGNPLLDIS+VVD+DFL K YDEMA+KYNVEYIA
Sbjct: 1 MALEGVLLGMGNPLLDISAVVDEDFLKKFDIQLNNAILAEDKHKSMYDEMAAKYNVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSIRVAQWMLQ+PGATSYIGCIGKDKFGEEM KNSK AGVNVHYYEDE+ TGTC
Sbjct: 61 GGATQNSIRVAQWMLQVPGATSYIGCIGKDKFGEEMTKNSKQAGVNVHYYEDENTPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYK +HLK+PENWALVEKAKYFYIAGFFLTVSP+SIQLVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKVDHLKQPENWALVEKAKYFYIAGFFLTVSPESIQLVAE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFSKV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDPQEKALPYMDYVFGNETEARTFSKVHGWETENVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
ALK+SQ PKASE RKR VITQGADPV VAQDGK+ +PVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQLPKASEARKRITVITQGADPVCVAQDGKVTLYPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLVQEKPIEECVRAGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFH 341
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388514649|gb|AFK45386.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/341 (82%), Positives = 303/341 (88%), Gaps = 18/341 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNK------------------YDEMASKYNVEYIA 42
MA EG+LLGMGNPLLDIS+VVD+DFL K YDEMA+KYNVEYIA
Sbjct: 1 MALEGVLLGMGNPLLDISAVVDEDFLKKFDIQLNNAILAEDKHKSMYDEMAAKYNVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSIRVAQWMLQ+PGATSYIGCIGKDKFGEEM KNSK AGVNVHYYEDE+ TGTC
Sbjct: 61 GGATQNSIRVAQWMLQVPGATSYIGCIGKDKFGEEMTKNSKQAGVNVHYYEDENTPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYK +HLK+PENWALVEKAKYFYIAGFFLTVSP+SIQLV E
Sbjct: 121 AVCVVGGERSLIANLSAANCYKVDHLKQPENWALVEKAKYFYIAGFFLTVSPESIQLVVE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFSKV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDPQEKALPYMDYVFGNETEARTFSKVHGWETENVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
ALK+SQ PKASE RKR VITQGADPV VAQDGK+ +PVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQLPKASEARKRITVITQGADPVCVAQDGKVTLYPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLVQEKPIEECVRAGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFH 341
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217073276|gb|ACJ84997.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/339 (82%), Positives = 302/339 (89%), Gaps = 18/339 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNK------------------YDEMASKYNVEYIA 42
MA EG+LLGMGNPLLDIS+VVD+DFL K YDEMA+KYNVEYIA
Sbjct: 1 MALEGVLLGMGNPLLDISAVVDEDFLKKFDIQLNNAILAEDKHKSMYDEMAAKYNVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSIRVAQWMLQ+PGATSYIGCIGKDKFGEEM KNSK AGVNVHYYEDE+ TGTC
Sbjct: 61 GGATQNSIRVAQWMLQVPGATSYIGCIGKDKFGEEMTKNSKQAGVNVHYYEDENTPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYK +HLK+PENWALVEKAKYFYIAGFFLTVSP+SIQLVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKVDHLKQPENWALVEKAKYFYIAGFFLTVSPESIQLVAE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFSKV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDPQEKALPYMDYVFGNETEARTFSKVHGWETENVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
ALK+SQ PKASE RKR VITQGADPV VAQDGK+ +PVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQLPKASEARKRITVITQGADPVCVAQDGKVTLYPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPE 321
GFLSQLVQEKPIEECVRAGCY ++VIIQRSGCTYPEKP+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPD 339
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255581753|ref|XP_002531678.1| adenosine kinase, putative [Ricinus communis] gi|223528683|gb|EEF30697.1| adenosine kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/338 (83%), Positives = 303/338 (89%), Gaps = 18/338 (5%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGGA 45
EGILLGMGNPLLDIS+VVD+DFLNKY+ EMA+ NVEYIAGGA
Sbjct: 5 EGILLGMGNPLLDISAVVDEDFLNKYEIKLNNAILAEDKHLPMYEEMANNSNVEYIAGGA 64
Query: 46 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 105
TQNSI+VAQWMLQIPGATSY+GCIGKDKFGEEM KNSK AGVNVHYYEDE+A TGTC VC
Sbjct: 65 TQNSIKVAQWMLQIPGATSYMGCIGKDKFGEEMTKNSKKAGVNVHYYEDETAPTGTCGVC 124
Query: 106 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 165
VVGGERSLVANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SIQLVAEHAA
Sbjct: 125 VVGGERSLVANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESIQLVAEHAA 184
Query: 166 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225
ANNK+F MNLSAPFICEFFKDA EKVLPYMDY+FGNETEARTF+KV GWETD+VEEIA K
Sbjct: 185 ANNKIFTMNLSAPFICEFFKDAQEKVLPYMDYVFGNETEARTFAKVHGWETDNVEEIAKK 244
Query: 226 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285
+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVGGFL
Sbjct: 245 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 304
Query: 286 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
SQLVQEKPIEECVRAGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 305 SQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFS 342
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109788|ref|XP_002315310.1| predicted protein [Populus trichocarpa] gi|118483900|gb|ABK93840.1| unknown [Populus trichocarpa] gi|222864350|gb|EEF01481.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/340 (83%), Positives = 302/340 (88%), Gaps = 18/340 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIA 42
MA EGILLGMGNPLLDIS+VVDDDFL KYD EMASK NVEYIA
Sbjct: 1 MACEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHLPMYDEMASKDNVEYIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSIRVAQWMLQIPG TSY+G IGKDKFGEEMKKNS AGVNVHYYEDE+A TGTC
Sbjct: 61 GGATQNSIRVAQWMLQIPGVTSYMGSIGKDKFGEEMKKNSTEAGVNVHYYEDEAAPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYKSEHLK+PENW LVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWKLVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDVQEKALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
ALK+SQWPKAS KR AVITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRIAVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 322
GFLSQLVQEKPIE+CVRAGCY ++VIIQRSGCTYPEKP+F
Sbjct: 301 GFLSQLVQEKPIEDCVRAGCYAANVIIQRSGCTYPEKPDF 340
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100781|ref|XP_002312012.1| predicted protein [Populus trichocarpa] gi|118482012|gb|ABK92937.1| unknown [Populus trichocarpa] gi|222851832|gb|EEE89379.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/341 (81%), Positives = 303/341 (88%), Gaps = 18/341 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIA 42
MA EGILLGMGNPLLDIS+VVDDDFL KYD EMASKY VE+IA
Sbjct: 1 MASEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHIPMYDEMASKYTVEFIA 60
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
GGATQNSI+VAQWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNVHYYEDE+A TGTC
Sbjct: 61 GGATQNSIKVAQWMLQIPGATSYMGCIGKDKFGEEMKKNSMKAGVNVHYYEDEAAPTGTC 120
Query: 103 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
AVCVVGGERSL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HAAANNK+F MNLSAPFICEFFKD E LPYMDY+FGNETEARTF+KV GWET++VEEI
Sbjct: 181 HAAANNKIFTMNLSAPFICEFFKDVQENALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
ALK+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLVQEKPIE+CV+AGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEDCVKAGCYAANVIIQRSGCTYPEKPDFS 341
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086001|emb|CBI31442.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/332 (84%), Positives = 298/332 (89%), Gaps = 18/332 (5%)
Query: 10 MGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGGATQNSIR 51
MGNPLLDISSVVD++FL +YD EMASKYNVEYIAGGATQNSIR
Sbjct: 1 MGNPLLDISSVVDEEFLQRYDIKLNNAILAEDKHLPMYDEMASKYNVEYIAGGATQNSIR 60
Query: 52 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 111
V QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTCAVCVVGGER
Sbjct: 61 VCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTCAVCVVGGER 120
Query: 112 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 171
SL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAEHAAANNKVF
Sbjct: 121 SLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAEHAAANNKVF 180
Query: 172 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231
MMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFS+V GWETD+VEEIA+K+SQWPK
Sbjct: 181 MMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFSRVHGWETDNVEEIAIKISQWPK 240
Query: 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291
AS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVGGFLSQLVQE
Sbjct: 241 ASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 300
Query: 292 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
KPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 KPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 332
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086003|emb|CBI31444.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/332 (84%), Positives = 298/332 (89%), Gaps = 18/332 (5%)
Query: 10 MGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGGATQNSIR 51
MGNPLLDISSVVD++FL KYD EMASKYNVEYIAGGATQNSIR
Sbjct: 1 MGNPLLDISSVVDEEFLQKYDIKLNNAILAEDKHLPMYDEMASKYNVEYIAGGATQNSIR 60
Query: 52 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 111
V QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTCAVCVVGGER
Sbjct: 61 VCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTCAVCVVGGER 120
Query: 112 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 171
SL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAEHAAANNKVF
Sbjct: 121 SLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAEHAAANNKVF 180
Query: 172 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231
MMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWETD+VEEIA+K+SQWPK
Sbjct: 181 MMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAIKISQWPK 240
Query: 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291
AS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVGGFLSQLVQE
Sbjct: 241 ASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 300
Query: 292 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
KPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 KPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 332
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| TAIR|locus:2142609 | 345 | ADK2 "adenosine kinase 2" [Ara | 0.956 | 0.895 | 0.799 | 3.3e-147 | |
| TAIR|locus:2085079 | 344 | ADK1 "adenosine kinase 1" [Ara | 0.956 | 0.898 | 0.799 | 6.9e-145 | |
| ZFIN|ZDB-GENE-030425-3 | 359 | adka "adenosine kinase a" [Dan | 0.941 | 0.846 | 0.578 | 1.2e-104 | |
| MGI|MGI:87930 | 361 | Adk "adenosine kinase" [Mus mu | 0.941 | 0.842 | 0.568 | 2.5e-104 | |
| UNIPROTKB|F1S2G5 | 362 | ADK "Uncharacterized protein" | 0.941 | 0.839 | 0.562 | 6.5e-104 | |
| RGD|2046 | 361 | Adk "adenosine kinase" [Rattus | 0.941 | 0.842 | 0.571 | 1.1e-103 | |
| UNIPROTKB|F1PJV5 | 362 | ADK "Uncharacterized protein" | 0.941 | 0.839 | 0.558 | 1.4e-103 | |
| UNIPROTKB|Q5ZMK9 | 359 | ADK "Uncharacterized protein" | 0.913 | 0.821 | 0.575 | 2.8e-103 | |
| UNIPROTKB|B7Z800 | 327 | ADK "cDNA FLJ57673, highly sim | 0.993 | 0.981 | 0.578 | 3.7e-103 | |
| ZFIN|ZDB-GENE-030131-948 | 345 | adkb "adenosine kinase b" [Dan | 0.913 | 0.855 | 0.589 | 9.5e-103 |
| TAIR|locus:2142609 ADK2 "adenosine kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1336 (475.4 bits), Expect = 3.3e-147, Sum P(2) = 3.3e-147
Identities = 247/309 (79%), Positives = 282/309 (91%)
Query: 15 LDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKF 74
L+ + + +D L YDEM+SK+NVEYIAGGATQNSI+VAQWMLQIPGATSY+G IGKDK+
Sbjct: 37 LNNAILAEDKHLPMYDEMSSKFNVEYIAGGATQNSIKVAQWMLQIPGATSYMGSIGKDKY 96
Query: 75 GEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENW 134
GE MKK++ AGVNVHYYEDESA TGTC VCVVGGERSL+ANLSAANCYK +HLKKPENW
Sbjct: 97 GEAMKKDATAAGVNVHYYEDESAPTGTCGVCVVGGERSLIANLSAANCYKVDHLKKPENW 156
Query: 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY 194
ALVEKAK++YIAGFFLTVSP+SIQLV+EHAAANNKVF MNLSAPFICEFFKD EK LPY
Sbjct: 157 ALVEKAKFYYIAGFFLTVSPESIQLVSEHAAANNKVFTMNLSAPFICEFFKDVQEKFLPY 216
Query: 195 MDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD 254
MD++FGNETEARTFS+V GWET+DVE+IA+K+SQ PKA+ KRT VITQGADPVVVA+D
Sbjct: 217 MDFVFGNETEARTFSRVHGWETEDVEQIAIKISQLPKATGTYKRTTVITQGADPVVVAED 276
Query: 255 GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314
GK+KK+PVI LPK+KLVDTNGAGDAFVGGF+SQLV+EK IEECV+AGCY S+V+IQRSGC
Sbjct: 277 GKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKSIEECVKAGCYASNVVIQRSGC 336
Query: 315 TYPEKPEFN 323
TYPEKP+FN
Sbjct: 337 TYPEKPDFN 345
|
|
| TAIR|locus:2085079 ADK1 "adenosine kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
Identities = 247/309 (79%), Positives = 276/309 (89%)
Query: 15 LDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKF 74
L+ + + +D L YDEM+ K+NVEYIAGGATQNSI+VAQWMLQ+PGATSY+G IGKDK+
Sbjct: 36 LNNAILAEDKHLPMYDEMSQKFNVEYIAGGATQNSIKVAQWMLQVPGATSYMGSIGKDKY 95
Query: 75 GEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENW 134
GE MKK++ AGV VHYYEDE+ TGTC VCV+GGERSL+ANLSAANCYK EHLKKPENW
Sbjct: 96 GEAMKKDATAAGVYVHYYEDEATPTGTCGVCVLGGERSLIANLSAANCYKVEHLKKPENW 155
Query: 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY 194
ALVEKAK++YIAGFFLTVSP+SIQLV EHAAANNKVF MNLSAPFICEFFKD EK LPY
Sbjct: 156 ALVEKAKFYYIAGFFLTVSPESIQLVREHAAANNKVFTMNLSAPFICEFFKDVQEKCLPY 215
Query: 195 MDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD 254
MDYIFGNETEARTFS+V GWETDDVE+IA+K+SQ PKAS KRT VITQGADPVVVA+D
Sbjct: 216 MDYIFGNETEARTFSRVHGWETDDVEQIAIKMSQLPKASGTYKRTTVITQGADPVVVAED 275
Query: 255 GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314
GK+KK+PVI LPK+KLVDTNGAGDAFVGGFLSQLV K IEECVRAGCY S+V+IQRSGC
Sbjct: 276 GKVKKYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVHGKGIEECVRAGCYASNVVIQRSGC 335
Query: 315 TYPEKPEFN 323
TYPEKP+FN
Sbjct: 336 TYPEKPDFN 344
|
|
| ZFIN|ZDB-GENE-030425-3 adka "adenosine kinase a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 961 (343.3 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 177/306 (57%), Positives = 235/306 (76%)
Query: 20 VVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEM 78
+ +D ++EM K+ VEY AGGATQNS++VAQWM+Q P ++ GCIGKDKFG+ +
Sbjct: 54 LAEDKHKEMFEEMVKKFKVEYRAGGATQNSVKVAQWMIQEPHNVGTFFGCIGKDKFGKIL 113
Query: 79 KKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALV 137
K+ ++ A V+ HYYE TG+CA C+ G RSLVANL+AANCYK E HL ENW LV
Sbjct: 114 KEKAEEAHVDAHYYEQSEEPTGSCAACITGDNRSLVANLAAANCYKKEKHLDLEENWKLV 173
Query: 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 197
EKA+ +YIAGFFLTVS +SI VA+HA+ NNK+F +NLSAPFICEFFK+AL KV+PY+D
Sbjct: 174 EKAQVYYIAGFFLTVSLESILKVAKHASENNKIFCLNLSAPFICEFFKEALMKVMPYVDI 233
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKL 257
+FGNETEA F++ QG+ET+D+EEIA K PK ++ R+R V TQG + V+A+ K+
Sbjct: 234 LFGNETEAAAFAREQGFETEDIEEIAKKAQSLPKENKKRQRIVVFTQGKEGTVMAKGDKV 293
Query: 258 KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
+ FPV+ + + ++VDTNGAGDAFVGGFLSQLVQ+K E+C+RAG Y ++VII+ +GCT+P
Sbjct: 294 ETFPVLEIDQSEIVDTNGAGDAFVGGFLSQLVQDKTFEQCIRAGHYAANVIIRHAGCTFP 353
Query: 318 EKPEFN 323
EKP+F+
Sbjct: 354 EKPDFH 359
|
|
| MGI|MGI:87930 Adk "adenosine kinase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 946 (338.1 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 174/306 (56%), Positives = 230/306 (75%)
Query: 20 VVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEM 78
+ +D +DE+ K+ VEY AGG+TQNS++VAQW++Q P A ++ GCIG DKFGE +
Sbjct: 56 LAEDKHKELFDELVKKFKVEYHAGGSTQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEIL 115
Query: 79 KKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALV 137
K+ + A V+ HYYE TGTCA C+ GG RSLVANL+AANCYK E HL NW LV
Sbjct: 116 KRKAADAHVDAHYYEQNEQPTGTCAACITGGNRSLVANLAAANCYKKEKHLDLERNWVLV 175
Query: 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 197
EKA+ +YIAGFFLTVSP+S+ VA +AA NN+VF +NLSAPFI +FFK+AL V+PY+D
Sbjct: 176 EKARVYYIAGFFLTVSPESVLKVARYAAENNRVFTLNLSAPFISQFFKEALMDVMPYVDI 235
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKL 257
+FGNETEA TF++ QG+ET D++EIA K PK + R+RT + TQG D +VA + +
Sbjct: 236 LFGNETEAATFAREQGFETKDIKEIAKKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDV 295
Query: 258 KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
FPV+ +++++DTNGAGDAFVGGFLSQLV +KP+ EC+RAG Y + VII+R+GCT+P
Sbjct: 296 TAFPVLDQNQEEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFP 355
Query: 318 EKPEFN 323
EKP+F+
Sbjct: 356 EKPDFH 361
|
|
| UNIPROTKB|F1S2G5 ADK "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 6.5e-104, Sum P(2) = 6.5e-104
Identities = 172/306 (56%), Positives = 231/306 (75%)
Query: 20 VVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEM 78
+ +D +DE+ K+ VEY AGG+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +
Sbjct: 57 LAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEIL 116
Query: 79 KKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALV 137
KK + A V+ HYYE TGTCA C+ GG RSLVANL+AANCYK E HL +NW LV
Sbjct: 117 KKKAAEAHVDAHYYEQNEQPTGTCAACITGGNRSLVANLAAANCYKKEKHLDMEKNWTLV 176
Query: 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 197
+KA+ +YIAGFFLTVSP+S+ VA HA+ NN++F +NLSAPFI +F+K++L KV+PY+D
Sbjct: 177 DKARVYYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDI 236
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKL 257
+FGNETEA TF++ QG+ET+D++EIA K PK + R+R + TQG D ++A + ++
Sbjct: 237 LFGNETEAATFAREQGFETEDIKEIAKKTQALPKVNSKRQRIVIFTQGRDDTILATESEV 296
Query: 258 KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
F V+ + ++VDTNGAGDAFVGGFLSQLV +KP+ EC+RAG Y + VII+R+GCT+P
Sbjct: 297 TAFAVLDQDQKEIVDTNGAGDAFVGGFLSQLVFDKPLTECIRAGHYAASVIIRRTGCTFP 356
Query: 318 EKPEFN 323
EKP+F+
Sbjct: 357 EKPDFH 362
|
|
| RGD|2046 Adk "adenosine kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 940 (336.0 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 175/306 (57%), Positives = 227/306 (74%)
Query: 20 VVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEM 78
+ +D +DE+ K+ VEY AGG+TQNS++VAQWM+Q P A ++ GCIG DKFGE +
Sbjct: 56 LAEDKHKELFDELVKKFKVEYHAGGSTQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEIL 115
Query: 79 KKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALV 137
K + A V+ HYYE TGTCA C+ GG RSLVANL+AANCYK E HL NW LV
Sbjct: 116 KSKAADAHVDAHYYEQNEQPTGTCAACITGGNRSLVANLAAANCYKKEKHLDLENNWMLV 175
Query: 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 197
EKA+ +YIAGFFLTVSP+S+ VA +AA NN+ F +NLSAPFI +FFK+AL +V+PY+D
Sbjct: 176 EKARVYYIAGFFLTVSPESVLKVARYAAENNRTFTLNLSAPFISQFFKEALMEVMPYVDI 235
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKL 257
+FGNETEA TF++ QG+ET D++EIA K PK + R+RT + TQG D +VA +
Sbjct: 236 LFGNETEAATFAREQGFETKDIKEIARKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDV 295
Query: 258 KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
FPV+ ++++VDTNGAGDAFVGGFLSQLV KP+ EC+RAG Y + VII+R+GCT+P
Sbjct: 296 TAFPVLDQNQEEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFP 355
Query: 318 EKPEFN 323
EKP+F+
Sbjct: 356 EKPDFH 361
|
|
| UNIPROTKB|F1PJV5 ADK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 171/306 (55%), Positives = 232/306 (75%)
Query: 20 VVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEM 78
+ +D +DE+ K+ VEY AGG+TQNSI+VAQWM+Q P A ++ GCIG D FGE +
Sbjct: 57 LAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPYKAATFFGCIGTDTFGEIL 116
Query: 79 KKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALV 137
KK + A V+ HYYE +TGTCAVC+ G RSLVANL+AANCYK E HL +NW LV
Sbjct: 117 KKKAAEAHVDAHYYEQNEQTTGTCAVCITGSNRSLVANLAAANCYKKEKHLDMDKNWTLV 176
Query: 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 197
EKA+ +YIAGFFLTVSP+S+ VA HA+ NN++F +NLSAPFI +F+K++L KV+PY+D
Sbjct: 177 EKARVYYIAGFFLTVSPESVLKVANHASENNRIFTLNLSAPFISQFYKESLMKVMPYIDI 236
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKL 257
+FGNETEA TF++ QG+ET+D++EIA K PK ++ R+R + TQG + ++A + ++
Sbjct: 237 LFGNETEAATFAREQGFETEDIKEIARKTQALPKVNQKRQRIVIFTQGREDTIMATESEV 296
Query: 258 KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
F V+ + ++VDTNGAGDAFVGGFLSQLV +KP+ EC+RAG Y + VII+R+GCT+P
Sbjct: 297 TAFAVLDQDQKEIVDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFP 356
Query: 318 EKPEFN 323
EKP+F+
Sbjct: 357 EKPDFH 362
|
|
| UNIPROTKB|Q5ZMK9 ADK "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 171/297 (57%), Positives = 229/297 (77%)
Query: 29 YDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGV 87
++E+ K+ VEY AGG+TQNS++VAQWM+Q P A ++ GCIGKDKFGE +KK ++ A V
Sbjct: 63 FEELVKKFKVEYHAGGSTQNSVKVAQWMIQNPYKAATFFGCIGKDKFGEILKKKAEEAHV 122
Query: 88 NVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIA 146
+ HYYE TGTCA C+ RSLVANL+AANCYK E HL +NW LVEKAK +YIA
Sbjct: 123 DAHYYEQSEEPTGTCAACITSDNRSLVANLAAANCYKKEKHLDLEKNWKLVEKAKVYYIA 182
Query: 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEAR 206
GFFLTVSP+++ VA A+ANNK+F +NLSAPFI +F+K+ + KV+PY+D +FGNETEA
Sbjct: 183 GFFLTVSPEAVLKVATQASANNKIFSLNLSAPFISQFYKEPMMKVMPYVDVLFGNETEAA 242
Query: 207 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLP 266
TF++ QG+ET+D++EIA K PK + R+R + TQG + V+A + ++ FPV+V
Sbjct: 243 TFAREQGFETEDIKEIARKTQALPKVNTKRQRIVIFTQGKEDTVMATENEVTTFPVLVSD 302
Query: 267 KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
+ ++VDTNGAGDAFVGGFLSQLV ++P+ EC+RAG Y + VII+RSGCT+PEKP+F+
Sbjct: 303 QSEIVDTNGAGDAFVGGFLSQLVYDRPVTECIRAGHYAASVIIKRSGCTFPEKPDFH 359
|
|
| UNIPROTKB|B7Z800 ADK "cDNA FLJ57673, highly similar to Adenosine kinase (EC 2.7.1.20)" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 187/323 (57%), Positives = 248/323 (76%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG- 61
+E IL GMGNPLLDIS+VVD DFL+K+DE+ K+ VEY AGG+TQNSI+VAQWM+Q P
Sbjct: 5 RENILFGMGNPLLDISAVVDKDFLDKFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHK 64
Query: 62 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAAN 121
A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA C+ G RSL+ANL+AAN
Sbjct: 65 AATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAAN 124
Query: 122 CYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI 180
CYK E HL +NW LVEKA+ YIAGFFLTVSP+S+ VA HA+ NN++F +NLSAPFI
Sbjct: 125 CYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFI 184
Query: 181 CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240
+F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++EIA K PK + R+R
Sbjct: 185 SQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIV 244
Query: 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 300
+ TQG D ++A + ++ F V+ + +++DTNGAGDAFVGGFLSQLV +KP+ EC+RA
Sbjct: 245 IFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRA 304
Query: 301 GCYTSHVIIQRSGCTYPEKPEFN 323
G Y + +II+R+GCT+PEKP+F+
Sbjct: 305 GHYAASIIIRRTGCTFPEKPDFH 327
|
|
| ZFIN|ZDB-GENE-030131-948 adkb "adenosine kinase b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 939 (335.6 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 175/297 (58%), Positives = 227/297 (76%)
Query: 29 YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGV 87
+DE+ +K VEY AGG+TQNS+++AQWM+Q P ++ GCIG D FGE +K+ + A V
Sbjct: 49 FDEIVNKSKVEYHAGGSTQNSVKIAQWMIQEPHKVATFFGCIGTDHFGEILKQKAAEAHV 108
Query: 88 NVHYYEDESASTGTCAVCVVGGERSLVANLSAANCY-KSEHLKKPENWALVEKAKYFYIA 146
+ HYYE TGTCA C+ G RSLVANL+AANCY K +HL NW+LVEKA+ +YIA
Sbjct: 109 DAHYYEQNQEPTGTCAACITGDNRSLVANLAAANCYNKEKHLDIDRNWSLVEKARVYYIA 168
Query: 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEAR 206
GFFLTVSPDSI VA+HA+ NNK+F +NLSAPFI +F K+ L KVLPY+D IFGNETEA
Sbjct: 169 GFFLTVSPDSILKVAKHASDNNKIFGLNLSAPFISQFSKEPLMKVLPYVDIIFGNETEAA 228
Query: 207 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLP 266
TF+K QG+ET+D+ EIA ++ PK ++ R+R V TQG + V K+K FPV+ +
Sbjct: 229 TFAKEQGFETEDIAEIAHRVQNLPKVNKNRQRIVVFTQGREDTVATVGDKVKMFPVLDID 288
Query: 267 KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
++ +VDTNGAGDAFVGGFLS LVQ++P+EEC+RAG Y +HVII+RSGCT+PEKP+F+
Sbjct: 289 QNDIVDTNGAGDAFVGGFLSALVQDQPLEECIRAGHYAAHVIIRRSGCTFPEKPDFH 345
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O49923 | ADK_PHYPA | 2, ., 7, ., 1, ., 2, 0 | 0.6323 | 0.9969 | 0.9387 | N/A | no |
| P55262 | ADK_CRIGR | 2, ., 7, ., 1, ., 2, 0 | 0.5647 | 0.9907 | 0.8864 | yes | no |
| P55264 | ADK_MOUSE | 2, ., 7, ., 1, ., 2, 0 | 0.5676 | 0.9907 | 0.8864 | yes | no |
| P47143 | ADK_YEAST | 2, ., 7, ., 1, ., 2, 0 | 0.3952 | 0.9411 | 0.8941 | yes | no |
| Q9LZG0 | ADK2_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.7840 | 0.9907 | 0.9275 | yes | no |
| Q54MB5 | ADK_DICDI | 2, ., 7, ., 1, ., 2, 0 | 0.4237 | 0.9597 | 0.9117 | yes | no |
| Q64640 | ADK_RAT | 2, ., 7, ., 1, ., 2, 0 | 0.5705 | 0.9907 | 0.8864 | yes | no |
| P78825 | ADK_SCHPO | 2, ., 7, ., 1, ., 2, 0 | 0.4298 | 0.9628 | 0.9147 | yes | no |
| Q9SF85 | ADK1_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.7781 | 0.9907 | 0.9302 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| PLN02548 | 332 | PLN02548, PLN02548, adenosine kinase | 0.0 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 1e-153 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 1e-131 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 2e-69 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 7e-52 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 2e-33 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 2e-32 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 3e-28 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 4e-23 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 8e-19 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 8e-16 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 8e-16 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 9e-16 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 1e-14 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 2e-11 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 4e-11 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 3e-10 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 2e-08 | |
| cd01943 | 328 | cd01943, MAK32, MAK32 kinase | 5e-08 | |
| PLN02813 | 426 | PLN02813, PLN02813, pfkB-type carbohydrate kinase | 6e-08 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 1e-07 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 3e-07 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 3e-07 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 5e-07 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 1e-06 | |
| TIGR03828 | 304 | TIGR03828, pfkB, 1-phosphofructokinase | 3e-06 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 4e-06 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 1e-05 | |
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 3e-05 | |
| cd01939 | 290 | cd01939, Ketohexokinase, Ketohexokinase (fructokin | 5e-05 | |
| cd01946 | 277 | cd01946, ribokinase_group_C, Ribokinase-like subgr | 5e-04 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 6e-04 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 0.001 |
| >gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase | Back alignment and domain information |
|---|
Score = 649 bits (1677), Expect = 0.0
Identities = 266/332 (80%), Positives = 289/332 (87%), Gaps = 18/332 (5%)
Query: 10 MGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGGATQNSIR 51
MGNPLLDIS+VVD DFL+KYD E+ASKYNVEYIAGGATQNSIR
Sbjct: 1 MGNPLLDISAVVDQDFLDKYDVKLNNAILAEEKHLPMYDELASKYNVEYIAGGATQNSIR 60
Query: 52 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 111
VAQWMLQIPGATSY+GCIGKDKFGEEMKK + AGVNVHYYEDES TGTCAV VVGGER
Sbjct: 61 VAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVVGGER 120
Query: 112 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 171
SLVANLSAANCYK EHLKKPENWALVEKAK++YIAGFFLTVSP+SI LVAEHAAANNK F
Sbjct: 121 SLVANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIMLVAEHAAANNKTF 180
Query: 172 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231
MMNLSAPFICEFFKD L + LPY+D++FGNETEARTF+KVQGWET+DVEEIALK+S PK
Sbjct: 181 MMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPK 240
Query: 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291
AS KRT VITQGADP VVA+DGK+K+FPVI LPK+KLVDTNGAGDAFVGGFLSQLVQ
Sbjct: 241 ASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQG 300
Query: 292 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
K IEECVRAG Y ++VIIQRSGCTYPEKP+F+
Sbjct: 301 KDIEECVRAGNYAANVIIQRSGCTYPEKPDFS 332
|
Length = 332 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-153
Identities = 164/341 (48%), Positives = 222/341 (65%), Gaps = 19/341 (5%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIA 42
+ LLG GNPLLDIS+ V D+FL KY +E+ S NV Y+
Sbjct: 2 SSAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVP 61
Query: 43 GGATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGT 101
GG+ N+ RVAQWMLQ P G Y+GC+G D+F E +K+ ++ GV + + A TGT
Sbjct: 62 GGSALNTARVAQWMLQAPKGFVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGT 121
Query: 102 CAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161
CAV V G ERSLVANL AAN +EH++ ++ A+ +Y+ GFFLTVSP+++ VA
Sbjct: 122 CAVLVCGKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLYYLEGFFLTVSPNNVLQVA 181
Query: 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 221
+HA + K+F +NLSAPFI +FF + L +VLPY+D +FGNE EA+TF+K W+T+D++E
Sbjct: 182 KHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKE 241
Query: 222 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 281
IA +++ PK S R R V TQG +P ++A + PV L ++K+VDTNGAGDAFV
Sbjct: 242 IAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFV 301
Query: 282 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 322
GGFL+Q K I+ CV AG Y++ VIIQ +GCTYPEKP F
Sbjct: 302 GGFLAQYANGKDIDRCVEAGHYSAQVIIQHNGCTYPEKPPF 342
|
Length = 345 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 376 bits (969), Expect = e-131
Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 34/330 (10%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYD---------------EMASKYNVEYIAGGATQN 48
+LG+GN L+DI + VDD FL K E+ +K V+YIAGG+ N
Sbjct: 1 RYDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAAN 60
Query: 49 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-V 107
+IR A + G+ ++IG +G DK G+ + K+ + AGV+ Y TGTCAV V
Sbjct: 61 TIRGAAALG---GSAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTP 117
Query: 108 GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAAN 167
ER++ L AAN + L +W+L+ KAKY Y+ G+ LTV P++I L AEHA N
Sbjct: 118 DAERTMCTYLGAANELSPDDL----DWSLLAKAKYLYLEGYLLTVPPEAILLAAEHAKEN 173
Query: 168 NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLS 227
+NLSAPFI + FK+AL ++LPY+D +FGNE EA ++ ET D E ALKL
Sbjct: 174 GVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAALKLL 230
Query: 228 QWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 287
+R R VITQGA VV + G++ +PV +P +K+VDTNGAGDAF GGFL
Sbjct: 231 A------LRCRIVVITQGAKGAVVVEGGEV--YPVPAIPVEKIVDTNGAGDAFAGGFLYG 282
Query: 288 LVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
LVQ +P+EEC+R G Y + +IQ+ G P
Sbjct: 283 LVQGEPLEECIRLGSYAAAEVIQQLGPRLP 312
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 2e-69
Identities = 82/283 (28%), Positives = 124/283 (43%), Gaps = 20/283 (7%)
Query: 37 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DE 95
VE AGGA N + G ++IG +G D FGE + + K GV+ Y DE
Sbjct: 30 TVEKGAGGAGANVAVALARLG---GEVTFIGKVGDDNFGEFLLELLKKEGVDTDYVVIDE 86
Query: 96 SASTGTCAVCV-VGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP 154
TG + V GER++ AA E L L+E A Y++G P
Sbjct: 87 DTRTGLALILVDGDGERTINFYRGAAADLTPEEL----PEDLLENADILYLSGSLPLPLP 142
Query: 155 DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214
++ AA N F NL P + L ++LP D + NE E + +
Sbjct: 143 EATLEELIEAAKNGGTFDPNLRDPLWA--DLEVLLELLPLADILKPNEEELEALTGEKIN 200
Query: 215 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTN 274
+ ++ K ++ +T V+T GAD ++ V +PK K+VDT
Sbjct: 201 DIEEALAALHKHAK-------GVKTVVVTLGADGALLVDGDGE--VHVPPVPKVKVVDTT 251
Query: 275 GAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317
GAGDAFV GFL+ L+ K +EE +R + +++Q++G
Sbjct: 252 GAGDAFVAGFLAGLLAGKSLEEALRFANAVAALVVQKTGAISS 294
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 173 bits (439), Expect = 7e-52
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 20/313 (6%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
++ +G +D+ + V D + + + + GG N VA + ++ + I
Sbjct: 2 VVVIGEANVDLIAQVVDRLPEPGETVLGDF-FKVAGGGKGAN---VAVALARLGAKVALI 57
Query: 67 GCIGKDKFGEEMKKNSKLAGVNV-HYYEDESASTGTCAVCVVG-GERSLVANLSAANCYK 124
G +G D FGE + + + GV+ H DE A+TG + V GER+ V AA
Sbjct: 58 GAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALLL 117
Query: 125 SEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFF 184
+ + + A +I+G L + P+++ E A A +L+
Sbjct: 118 TPED---LDEDELAGADVLHISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALWD- 173
Query: 185 KDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 244
++ LE++L D +F NE EA + +D E A L +T V+T
Sbjct: 174 RELLEELLALADILFPNEEEAELLTG----LEEDAEAAAALLLAKGV------KTVVVTL 223
Query: 245 GADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 304
GA+ VV G PV K K+VDT GAGDAF GFL+ L++ K +EE +R
Sbjct: 224 GAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFANAA 283
Query: 305 SHVIIQRSGCTYP 317
+ + + R G
Sbjct: 284 AALAVTRPGARPS 296
|
Length = 311 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 2e-33
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGT 101
GGA N VA + ++ + + +G D FG + + GV+ + D TG
Sbjct: 31 GGAEAN---VAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGL 87
Query: 102 CAV-CVVGGERSLV---ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157
+ GGER ++ A SAA+ E L + A + A + +++G L +S +
Sbjct: 88 YFLEIGAGGERRVLYYRAG-SAASRLTPEDL----DEAALAGADHLHLSGITLALSESAR 142
Query: 158 QLV---AEHAAANNK--VFMMNLSAPFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKV 211
+ + E A A F +N E ++ALE++LPY+D + +E EA
Sbjct: 143 EALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALL-- 200
Query: 212 QGWETD-DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKL 270
G E D E AL L + + V+ GA+ +V G P ++
Sbjct: 201 -GDEDPTDAAERALAL-------ALGVKAVVVKLGAEGALVYTGGGRVFVPA---YPVEV 249
Query: 271 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315
VDT GAGDAF GFL+ L++ +EE +R + +++ R G
Sbjct: 250 VDTTGAGDAFAAGFLAGLLEGWDLEEALRFANAAAALVVTRPGDI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 2e-32
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLV----A 115
+ IG +G D FG+E+ +N + G++V Y A TGT AV V GE +V A
Sbjct: 53 VAMIGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGT-AVITVDESGENRIVVVPGA 111
Query: 116 NLSAANCYKSEHLKKPENWALVEKAK-YFYIAGFFLT---VSPDSIQLVAEHAAANNKVF 171
N A V+ A A L + +++ A
Sbjct: 112 NGEL-------------TPADVDAALELIAAADVLLLQLEIPLETVLAALRAARRAGVTV 158
Query: 172 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231
++N AP + ++L +D + NETEA + ++ + +D E+ A L
Sbjct: 159 ILN-PAPA-----RPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGV 212
Query: 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291
+ ++T GA ++A G+++ P K K VDT GAGD F+G + L +
Sbjct: 213 ------KNVIVTLGAKGALLASGGEVEHVPAF---KVKAVDTTGAGDTFIGALAAALARG 263
Query: 292 KPIEECVRAGCYTSHVIIQRSG 313
+EE +R + + + R G
Sbjct: 264 LSLEEAIRFANAAAALSVTRPG 285
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 3e-28
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 23/267 (8%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-GGERSLVANLS 118
S IG +G D FG+E+ +N K G++ Y + TGT + V GE +V
Sbjct: 46 AEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAG 105
Query: 119 AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP 178
A E + AL+ ++ + L + +++ A+ A + ++N AP
Sbjct: 106 ANAELTPEDIDA--AEALIAESDIVLLQ---LEIPLETVLEAAKIAKKHGVKVILN-PAP 159
Query: 179 FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238
I KD +++L +D I NETEA + ++ + +D E+ A KL + +
Sbjct: 160 AI----KDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLE------KGVK 209
Query: 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 298
+IT G+ ++ + K P K K VDT AGD F G F L + K +E+ +
Sbjct: 210 NVIITLGSKGALLVSKDESKLIPAF---KVKAVDTTAAGDTFNGAFAVALAEGKSLEDAI 266
Query: 299 RAGCYTSHVIIQRSGC--TYPEKPEFN 323
R + + + R G + P E
Sbjct: 267 RFANAAAAISVTRKGAQSSIPYLEEVE 293
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 4e-23
Identities = 56/252 (22%), Positives = 96/252 (38%), Gaps = 32/252 (12%)
Query: 66 IGCIGKDKFGEEMKKNSKLAGVNV-HYYEDESASTGTCAVCVVGGERSLVANLSAANCYK 124
+ +G+D G + + GV+ H + STG + G + + A
Sbjct: 56 VAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAM--- 112
Query: 125 SEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP--FICE 182
+ ++A +A V S + E A + P +
Sbjct: 113 -------DELEPNDEADPDGLADI---VHLSSGPGLIELARELAAGGITVSFDPGQELPR 162
Query: 183 FFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242
+ LE++L D +F N+ EA + G ++ R V+
Sbjct: 163 LSGEELEEILERADILFVNDYEAELLKERTGLSEAELAS--------------GVRVVVV 208
Query: 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 302
T G +V +DG+ + P + P K+VDT GAGDAF GFL L++ +EE +R G
Sbjct: 209 TLGPKGAIVFEDGEEVEVPAV--PAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGN 266
Query: 303 YTSHVIIQRSGC 314
+ + ++R G
Sbjct: 267 LAASLKVERRGA 278
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 8e-19
Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 35/276 (12%)
Query: 42 AGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTG 100
GGA N L A +IG +G D+FG+ + + K AGV+ D +A T
Sbjct: 27 PGGAPANVAVALA-RLGGKAA--FIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTT 83
Query: 101 TCAVCVVG-GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSI 157
V + GERS A L N L+ +A + L P ++
Sbjct: 84 LAFVTLDADGERSFEFYRGPA---ADLLLDTELNPDLLSEADILHFGSIALASEPSRSAL 140
Query: 158 QLVAEHAAANNKV--FMMNLSAPFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213
+ E A + F NL P E ++ + ++L D + ++ E
Sbjct: 141 LELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFG--- 197
Query: 214 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDT 273
+D EEIA L + ++T+GAD ++ G + + P ++VDT
Sbjct: 198 --EEDPEEIAALL-LLFGLKLV-----LVTRGADGALLYTKGGVGEVPG---IPVEVVDT 246
Query: 274 NGAGDAFVGGFLSQLVQ-------EKPIEECVRAGC 302
GAGDAFV G L+QL+ E + E +R
Sbjct: 247 TGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFAN 282
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 8e-16
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 150 LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFS 209
L+ +P+++ E A +++ P + LEK+LP +D + NE EA +
Sbjct: 66 LSPAPEAVLDALEEARRRGVPVVLDP-GPRAVRLDGEELEKLLPGVDILTPNEEEAEALT 124
Query: 210 KVQGWETDDVEEIA-LKLSQWPKASEIRKRTAVITQGADPVVVAQDGK----LKKFPVIV 264
+ E + E A L LS+ PK ++T G +VA G + FPV
Sbjct: 125 GRRDLEVKEAAEAAALLLSKGPKVV-------IVTLGEKGAIVATRGGTEVHVPAFPV-- 175
Query: 265 LPKDKLVDTNGAGDAFVGGFLSQLV 289
K+VDT GAGDAF+ + L
Sbjct: 176 ----KVVDTTGAGDAFLAALAAGLA 196
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 8e-16
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 35/308 (11%)
Query: 14 LLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDK 73
L I V+ L D+++ ++ +AGG+ N+IR + +T IG G D+
Sbjct: 60 LEHILREVNAHILPSPDDLSP---IKTMAGGSVANTIRGLSAGFGV--STGIIGACGDDE 114
Query: 74 FGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG--GERSLVANLSAANCYKSEHLKKP 131
G+ N +GV++ + T C VC+V G R++ LS+A +++ L K
Sbjct: 115 QGKLFVSNMGFSGVDLSRLRAKKGPTAQC-VCLVDALGNRTMRPCLSSAVKLQADELTKE 173
Query: 132 E----NWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDA 187
+ W ++ Y + + I+ A ++L++ + F+
Sbjct: 174 DFKGSKWLVLRYGFY----------NLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSP 223
Query: 188 LEKVLPY--MDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQG 245
L ++L +D F NE EAR ++G + D E L+++ AV+T G
Sbjct: 224 LLQLLESGKIDLCFANEDEAREL--LRGEQESDPEAALEFLAKYCN-------WAVVTLG 274
Query: 246 ADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 305
+ + ++ + P I + VD GAGD F GFL L++ +EEC + G +
Sbjct: 275 SKGCIARHGKEVVRVPAIG--ETNAVDATGAGDLFASGFLYGLIKGLSLEECCKVGACSG 332
Query: 306 HVIIQRSG 313
+++ G
Sbjct: 333 GSVVRALG 340
|
Length = 367 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 9e-16
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 29/271 (10%)
Query: 32 MASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSKLAGVNV- 89
Y V + GA Q VA L GA ++I C+G D GE M++ G++
Sbjct: 30 TGRHYQVAFGGKGANQ---AVAAARL---GADIAFIACVGDDSIGESMRQQLAKDGIDTA 83
Query: 90 HYYEDESASTGTCAVCVVG-GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGF 148
+ STG + V GE S+ + A ++ L+ A +
Sbjct: 84 PVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHR--ELIANADALLMQ-- 139
Query: 149 FLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTF 208
L +++ A+ A + ++N AP E + L V D I NETEA
Sbjct: 140 -LETPLETVLAAAKIAKQHGTKVILN-PAP-ARELPDELLALV----DIITPNETEAEKL 192
Query: 209 SKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKD 268
+ ++ + DD + A L Q K E T +IT G+ V ++++G+ ++ P +
Sbjct: 193 TGIRVEDDDDAAKAAQVLHQ--KGIE----TVLITLGSRGVWLSENGEGQRVPG---FRV 243
Query: 269 KLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299
+ VDT AGD F G ++ L++ KP+ E +R
Sbjct: 244 QAVDTIAAGDTFNGALVTALLEGKPLPEAIR 274
|
Length = 306 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 1e-14
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 32/249 (12%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC-AVCVVGGERSLVANLSAAN 121
+ + +G D GE + + S+ AG+NV E ST + A+ G+ LV L+ +
Sbjct: 52 VALLSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGD--LVVALADMD 109
Query: 122 CYKSEHLKKPENWA-LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI 180
Y+ +++AK + + ++++ + AA + P
Sbjct: 110 IYELLTPDFLRKIREALKEAKPIVVDA---NLPEEALEYLLALAAKHG--------VPVA 158
Query: 181 CEFFK----DALEKVLPYMDYIFGNETEARTFSKVQGWETDD-VEEIALKLSQWPKASEI 235
E L +L +D + N E + +D + + L K
Sbjct: 159 FEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIK---- 214
Query: 236 RKRTAVITQGADPVVVAQDGKL---KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292
++T GA V+++ K FP + +V+ GAGDAFV G ++ L++
Sbjct: 215 ---NVIVTLGAKGVLLSSREGGVETKLFPAPQ--PETVVNVTGAGDAFVAGLVAGLLEGM 269
Query: 293 PIEECVRAG 301
+++ +R
Sbjct: 270 SLDDSLRFA 278
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 2e-11
Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 30/272 (11%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV---GGERSLVANLS 118
+ +G +G D FG + KN K GVN + E++STG A+ V G +V
Sbjct: 69 VAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTG-LAMIFVDTKTGNNEIVIIPG 127
Query: 119 AANCYKSEHLKKPENWALVEKAKYFYIAG--FFLTVSPDSIQLVAEHAAANNKVFMMNLS 176
A N + + ++ + I L + D+++ E + +
Sbjct: 128 ANNALTPQMVDA--QTDNIQNICKYLICQNEIPLETTLDALKEAKERG-----CYTVFNP 180
Query: 177 APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236
AP + ++ L Y+ NE EA + + G E D E A K S K +
Sbjct: 181 APAPKLAEVEIIKPFLKYVSLFCVNEVEA---ALITGMEVTD-TESAFKAS---KELQQL 233
Query: 237 K-RTAVITQGADPVVVAQDGKLKKF--PVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 293
+IT GA+ ++ + V K VDT GAGD FVG + + K
Sbjct: 234 GVENVIITLGANGCLIVEKENEPVHVPGKRV----KAVDTTGAGDCFVGSMAYFMSRGKD 289
Query: 294 IEECVRAGCYTSHVIIQRSGC--TYPEKPEFN 323
++E + + + + R G +YP E
Sbjct: 290 LKESCKRANRIAAISVTRHGTQSSYPHPSELP 321
|
Length = 326 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 4e-11
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 31/256 (12%)
Query: 48 NSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV 107
N++ VA + ++ ++YIG +G D G ++ K GV++ + + V +V
Sbjct: 24 NALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVELV 83
Query: 108 GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAA 166
G+R LS EH +A Y++ F L S + E A
Sbjct: 84 DGDRIFG--LSNKGGVAREHP---------FEADLEYLSQFDLVHTGIYSHEGHLEKALQ 132
Query: 167 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 226
+S F + D L+ V PY+D+ F + ++ +D+ + LK
Sbjct: 133 ALVGAGALISFDFSDRWDDDYLQLVCPYVDFAFFSASD----------LSDEEVKAKLK- 181
Query: 227 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL- 285
+A + ++T+G D + + V P + +VDT GAGD+F+ GFL
Sbjct: 182 ----EAVSRGAKLVIVTRGEDGAIAYDGAVF--YSVAPRPVE-VVDTLGAGDSFIAGFLL 234
Query: 286 SQLVQEKPIEECVRAG 301
S L I E +R G
Sbjct: 235 SLLAGGTAIAEAMRQG 250
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 3e-10
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 33/282 (11%)
Query: 40 YIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAST 99
Y+ GG ++ VA L IP T G +G + +++++ + G+
Sbjct: 33 YVIGGGF--NVMVAASRLGIP--TVNAGPLGNGNWADQIRQAMRDEGI-EILLPPRGGDD 87
Query: 100 GTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157
G C V +V GERS ++ A + +E V Y Y++G+ L S
Sbjct: 88 GGCLVALVEPDGERSFISISGAEQDWSTEWFATLT----VAPYDYVYLSGYTLASENASK 143
Query: 158 QLVAE--HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE 215
++ E A + + P I + L+ ++ N EA F++
Sbjct: 144 VILLEWLEALPAGTTLVFDPG-PRISDIPDTILQALMAKRPIWSCNREEAAIFAERGD-- 200
Query: 216 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVV----AQDGKLKKFPVIVLPKDKLV 271
+ V+ G++ + + F V K V
Sbjct: 201 ----PAAEASALRI---YAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKV------KAV 247
Query: 272 DTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313
DT GAGD GG L+ L + + + V + +++ RSG
Sbjct: 248 DTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 290
++T GA+ V+V G+++ FP P VDT GAGDAFV G L+ L Q
Sbjct: 214 ALLLVTLGAEGVLVHTRGQVQHFPA---PSVDPVDTTGAGDAFVAGLLAGLSQ 263
|
Length = 304 |
| >gnl|CDD|238918 cd01943, MAK32, MAK32 kinase | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 5e-08
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 7/142 (4%)
Query: 178 PFICEFF-KDALEKVLPYMDYIFG-NETEARTFSKVQGWE--TDDVEEIALKLSQWPKAS 233
P C+ + L + LP +D +F N EA + E +D+ +E L+ +
Sbjct: 163 PDSCDPENLEDLLQALPRVD-VFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGIL 221
Query: 234 EIRKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291
+ V+ G V G P K+VD G G++F+GGF + L
Sbjct: 222 QDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALT 281
Query: 292 KPIEECVRAGCYTSHVIIQRSG 313
K I+E G + I++ G
Sbjct: 282 KSIDEACIYGSVAASFAIEQVG 303
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. Length = 328 |
| >gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 6e-08
Identities = 71/314 (22%), Positives = 118/314 (37%), Gaps = 59/314 (18%)
Query: 7 LLGMGNPLLDISSVVDDDFLNK------------YDEMAS--------KYNVEYIAGGAT 46
+LG+G ++D S +VDD+FL + ++E Y AGG+
Sbjct: 72 VLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKAS--AGGSL 129
Query: 47 QNSI----RVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESA--ST 99
N++ R+ P + G +G D G+ +KL NVH+ +T
Sbjct: 130 SNTLVALARLGSQSAAGPALNVAMAGSVGSDPLGDFY--RTKLRRANVHFLSQPVKDGTT 187
Query: 100 GTCAVCVV-GGERSLVANLSAANCYK--SEHLKKPENWA-LVEKAKYFYIAGFFLTVSPD 155
GT V +R++++ Y+ S + A + K++ + G+ + P
Sbjct: 188 GTVIVLTTPDAQRTMLS-------YQGTSSTVNYDSCLASAISKSRVLVVEGYLWEL-PQ 239
Query: 156 SIQLVA---EHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKV 211
+I+ +A E A + + S E +D V+ Y D +F N EAR +
Sbjct: 240 TIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGL 299
Query: 212 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLV 271
+ E LS + +T GA + G+ P V
Sbjct: 300 G--SEESPESATRYLSHFCP-------LVSVTDGARGSYIGVKGEAVYIPP---SPCVPV 347
Query: 272 DTNGAGDAFVGGFL 285
DT GAGDA+ G L
Sbjct: 348 DTCGAGDAYAAGIL 361
|
Length = 426 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 1e-07
Identities = 55/294 (18%), Positives = 114/294 (38%), Gaps = 42/294 (14%)
Query: 21 VDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80
+ D+ ++ Y ++ + +GG N++ VA + + I +G D +G ++K+
Sbjct: 6 IGDNCVDIYPQLGKAF-----SGG---NAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQ 57
Query: 81 NSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKA 140
+ GV++ + + T V + +R Y + ++AL E+
Sbjct: 58 DLARMGVDISHVHTKHGVTAQTQVELHDNDRVF-------GDYTEGVM---ADFALSEED 107
Query: 141 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFG 200
+ +A + + + +I AE A + F ++ + ++P++DY F
Sbjct: 108 YAW-LAQYDIVHA--AIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYAFA 164
Query: 201 NETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDG-KLKK 259
+ E + LK+ ++T G + +A DG + +
Sbjct: 165 -------------SAPQEDEFLRLKMKA---IVARGAGVVIVTLG-ENGSIAWDGAQFWR 207
Query: 260 FPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313
P +VDT GAGD+F+ GFL + + + + G + IQ G
Sbjct: 208 QAPE--PVT-VVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACAAKTIQYHG 258
|
Length = 260 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 3e-07
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 31/173 (17%)
Query: 135 ALVEKAKYFYIAGFF-LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL- 192
L+ I+G V PD + A A I + +AL + L
Sbjct: 123 ELLASGDIVVISGSLPPGVPPDFYAQLIAIARKRG--------AKVILDTSGEALREALA 174
Query: 193 --PYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA---VITQGAD 247
P++ I N E G E EEI A E+ R A +++ GAD
Sbjct: 175 AKPFL--IKPNHEELEELF---GRELKTEEEI------IEAARELLDRGAENVLVSLGAD 223
Query: 248 -PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299
++V ++G LK P PK ++V+T GAGD+ V GFL+ L + +EE +R
Sbjct: 224 GALLVTKEGALKATP----PKVEVVNTVGAGDSMVAGFLAGLARGLSLEEALR 272
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 62/297 (20%), Positives = 113/297 (38%), Gaps = 37/297 (12%)
Query: 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGG-ATQNSIRVAQWMLQIPGATS 64
+LG+G +LD+ +V D + I GG A ++ VA+ Q
Sbjct: 1 RVLGVGLAVLDLIYLVAS--FPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQ----AR 54
Query: 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVVGGERSLVANLSAANCY 123
IG +G D G + GV+ + A + ++ + G+R+ ++
Sbjct: 55 LIGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSITDITGDRATISI----TAI 110
Query: 124 KSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEF 183
++ A++ A + G P++ +A+ A A ++L
Sbjct: 111 DTQAAPDSLPDAILGGADAVLVDG----RQPEAALHLAQEARARGIPIPLDLDGGG---- 162
Query: 184 FKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243
LE++LP D+ +E R + ++ AL+L + +T
Sbjct: 163 -LRVLEELLPLADHAICSENFLRPNTGSA-------DDEALELLASLGIPFV-----AVT 209
Query: 244 QGADPVV-VAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299
G + + +DG+L P ++VDT GAGD F G F L + P+ E +R
Sbjct: 210 LGEAGCLWLERDGELFHVPA---FPVEVVDTTGAGDVFHGAFAHALAEGMPLREALR 263
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 5e-07
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 235 IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 294
R ++T+G ++ G+ P K K+ D+ GAGD+F GF+ L++ I
Sbjct: 188 PFPRYLIVTEGELGAILYPGGRYNHVP---AKKAKVPDSTGAGDSFAAGFIYGLLKGWSI 244
Query: 295 EECVRAG 301
EE + G
Sbjct: 245 EEALELG 251
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 300
+++ GAD ++ + + PK K+V T GAGD+ V GF++ L Q +EE +R
Sbjct: 218 LVSLGADGALLVTKDGVYRASP---PKVKVVSTVGAGDSMVAGFVAGLAQGLSLEEALRL 274
Query: 301 G 301
Sbjct: 275 A 275
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 177 APFICEFFKDALEKVLPYMDY-IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235
A I + +AL L + I N+ E G E +EEI A E+
Sbjct: 158 AKVILDTSGEALRDGLKAKPFLIKPNDEELEELF---GRELKTLEEII------EAAREL 208
Query: 236 RKRTA---VITQGADPVV-VAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291
A +I+ GAD + V ++G L P PK ++V T GAGD+ V GFL+ L
Sbjct: 209 LDLGAENVLISLGADGALLVTKEGALFAQP----PKGEVVSTVGAGDSMVAGFLAGLESG 264
Query: 292 KPIEECVR 299
+EE +R
Sbjct: 265 LSLEEALR 272
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). Length = 304 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 48/282 (17%), Positives = 82/282 (29%), Gaps = 45/282 (15%)
Query: 41 IAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFG-----------EEMKKNSKLAGVNV 89
I G T + I + PG + + + G + K S L +
Sbjct: 4 IIGHVTIDEIVTNGSGVVKPGGPATYASLTLSRLGLTVKLVTKVGRDYPDKWSDLFDNGI 63
Query: 90 HYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFF 149
S T T + R+ A +E P + E +
Sbjct: 64 EVISLLSTETTTFELNYTNEGRTRTLLAKCAAIPDTE---SPLSTITAEI---VILGPVP 117
Query: 150 LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDAL--EKVLPYMDYIFGNETEART 207
+SP + A F+ + F+ ++ L +L D + + EA
Sbjct: 118 EEISPSLFRKFA---------FISLDAQGFLRRANQEKLIKCVILKLHDVLKLSRVEAEV 168
Query: 208 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPK 267
S E+A + + ++T G + + P K
Sbjct: 169 IS--------TPTELARLIKETGVK------EIIVTDGEEGGYIFDGNGKYTIP---ASK 211
Query: 268 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309
+VD GAGD F+ FL + K I+E + I
Sbjct: 212 KDVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAAAAKFI 253
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 300
+++ GAD ++ + PK ++V T GAGD+ V GFL+ L++ K +EE +R
Sbjct: 219 IVSLGADGALLVTAEGVYF---ASPPKVQVVSTVGAGDSMVAGFLAGLLKGKSLEEALRF 275
Query: 301 G 301
Sbjct: 276 A 276
|
Length = 310 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 255 GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 294
G+++ F V K VDT GAGDAFVGG LSQL ++ +
Sbjct: 251 GRVEGFKV------KAVDTTGAGDAFVGGLLSQLAKDLSL 284
|
Length = 330 |
| >gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 197
+ + + G + +Q + EH NN+ + ++ E ++ L ++ Y D
Sbjct: 126 TQYGWIHFEGRNPDETLRMMQHIEEH---NNRRPEIRITISVEVEKPREELLELAAYCDV 182
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI----TQGADPVVVAQ 253
+F ++ A++ G+++ + + P +K ++ QGA +
Sbjct: 183 VFVSKDWAQSR----GYKSPE----ECLRGEGP---RAKKAALLVCTWGDQGAG--ALGP 229
Query: 254 DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285
DG+ P ++VDT GAGD F +
Sbjct: 230 DGEYVHSPA--HKPIRVVDTLGAGDTFNAAVI 259
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. Length = 290 |
| >gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 19/135 (14%)
Query: 173 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232
MN F + L+KVL +D + N+ EAR + A +
Sbjct: 146 MN----FWISIKPEKLKKVLAKVDVVIINDGEARQLT-----------GAANLVKAARLI 190
Query: 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292
+ + +I +G ++ D F P + + D GAGD F GGF+ L +K
Sbjct: 191 LAMGPKALIIKRGEYGALLFTDDGY--FAAPAYPLESVFDPTGAGDTFAGGFIGYLASQK 248
Query: 293 --PIEECVRAGCYTS 305
RA Y S
Sbjct: 249 DTSEANMRRAIIYGS 263
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 277 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 42 AGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTG 100
GGA N VA + ++ G + +IG +G D FG M++ + GV+ Y D + T
Sbjct: 27 PGGAPAN---VAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTS 83
Query: 101 TCAVCVVG----GERS 112
T VV GERS
Sbjct: 84 T---VVVDLDDQGERS 96
|
Length = 304 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 181 CEFFKDALEKVLPYMDYIFGN-ETEARTFSKVQGW-------ET---DDVEEIA-LKLSQ 228
E + LE+++ D + + + R F V G ET D + I LK S
Sbjct: 130 GEILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDMLPRIGFLKASS 189
Query: 229 ----WPKASEIRKRTAVI-TQGADPV-VVAQDGKLK--KFPVIVLPKDKLVDTNGAGDAF 280
+ E+R++ VI T G + +DG+++ FP I VD GAGD+F
Sbjct: 190 EEALFIDVEEVRQKCCVIVTNGKKGCRIYWKDGEMRVPPFPAIQ------VDPTGAGDSF 243
Query: 281 VGGFLSQLVQEKPIEECVRAGCY 303
+GGF++ LVQ + + G Y
Sbjct: 244 LGGFVAGLVQGLAVPDAALLGNY 266
|
Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| KOG2854 | 343 | consensus Possible pfkB family carbohydrate kinase | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| KOG2855 | 330 | consensus Ribokinase [Carbohydrate transport and m | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 100.0 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 100.0 | |
| KOG2947 | 308 | consensus Carbohydrate kinase [Carbohydrate transp | 100.0 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 100.0 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 100.0 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.96 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.81 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.8 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.79 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.78 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.78 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.77 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.77 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.77 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.75 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.75 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.74 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.74 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.58 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.56 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.55 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.55 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.55 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.54 | |
| KOG3009 | 614 | consensus Predicted carbohydrate kinase, contains | 99.51 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.49 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.49 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.47 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.42 | |
| PLN02978 | 308 | pyridoxal kinase | 99.41 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.22 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 99.22 | |
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 99.12 | |
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 98.96 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 98.49 | |
| KOG2599 | 308 | consensus Pyridoxal/pyridoxine/pyridoxamine kinase | 98.46 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 97.97 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 97.94 | |
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.86 | |
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 97.85 | |
| KOG3974 | 306 | consensus Predicted sugar kinase [Carbohydrate tra | 97.84 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 97.83 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 97.74 | |
| PF04587 | 444 | ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco | 97.66 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 97.64 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 97.6 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 96.25 | |
| cd01938 | 445 | ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and | 95.78 | |
| COG4809 | 466 | Archaeal ADP-dependent phosphofructokinase/glucoki | 92.74 | |
| PRK10076 | 213 | pyruvate formate lyase II activase; Provisional | 89.89 | |
| KOG4184 | 478 | consensus Predicted sugar kinase [Carbohydrate tra | 87.22 |
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=362.03 Aligned_cols=320 Identities=50% Similarity=0.858 Sum_probs=266.9
Q ss_pred ccceEEEeCCceeeeEeecCh-----h-------------HHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCC-cE
Q 020650 3 QEGILLGMGNPLLDISSVVDD-----D-------------FLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-AT 63 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~-----~-------------~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~-~v 63 (323)
..++|+|+|+.++|++..+++ . .+|.+++.....+....+||++.|+|.++++|..+|. ++
T Consensus 4 ~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~v 83 (345)
T PTZ00247 4 APKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGFV 83 (345)
T ss_pred CCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCcE
Confidence 456999999999999999984 1 3677788888888899999999999999998433455 99
Q ss_pred EEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEE
Q 020650 64 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 143 (323)
Q Consensus 64 ~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 143 (323)
.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++++|+++.+.+++..+++++++.....+.+++++++
T Consensus 84 ~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~~~~r~~~~~~ga~~~l~~~~i~~~~~~~~l~~~~~v 163 (345)
T PTZ00247 84 CYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVCGKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLY 163 (345)
T ss_pred EEEEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEcCCCcccccCcchhhcCChHHcCcHHHHHHHhhCCEE
Confidence 99999999999999999999999999887666678999998887789988888888888888887652223468899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHH
Q 020650 144 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 223 (323)
Q Consensus 144 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~ 223 (323)
|++++.+..+.+.+..+++.+++++.++++|++.+.+.....+.+..+++++|++++|++|++.+++....+.+++++++
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 243 (345)
T PTZ00247 164 YLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEIA 243 (345)
T ss_pred EEEEEEecccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhhccCCCccCHHHHH
Confidence 99998666678899999999999999999998766544334455788999999999999999999875433345677887
Q ss_pred HHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 224 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 224 ~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
+.+.++.+....+.+.++||+|++|++++++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|++
T Consensus 244 ~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~~~~al~~a~~ 323 (345)
T PTZ00247 244 ARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDIDRCVEAGHY 323 (345)
T ss_pred HHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77743211012357899999999999999988888888766544469999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccCCCCCCC
Q 020650 304 TSHVIIQRSGCTYPEKPEF 322 (323)
Q Consensus 304 ~Aa~~~~~~G~~~p~~~~~ 322 (323)
+|+++|++.|+.+|..+++
T Consensus 324 aAa~~v~~~Ga~~~~~~~~ 342 (345)
T PTZ00247 324 SAQVIIQHNGCTYPEKPPF 342 (345)
T ss_pred HHHHHHhccCCCCCCCCCC
Confidence 9999999999998887765
|
|
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-47 Score=337.19 Aligned_cols=297 Identities=85% Similarity=1.313 Sum_probs=247.7
Q ss_pred HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEE
Q 020650 26 LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 105 (323)
Q Consensus 26 ~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~ 105 (323)
+|.+++.+...+....+||++.|++.+++++.++|.++.++|.+|+|.+|+.+++.|+++||+++++...+.+|+.++++
T Consensus 35 ~p~~~~~~~~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~vG~D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~ 114 (332)
T PLN02548 35 LPMYDELASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVL 114 (332)
T ss_pred HHHHHHHhccCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEEEcCChhHHHHHHHHHHcCCceeeeccCCCCCceEEEE
Confidence 57779999999999999999999988777655567999999999999999999999999999999986667789998888
Q ss_pred EeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHH
Q 020650 106 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFK 185 (323)
Q Consensus 106 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 185 (323)
+++|+|+++.+.++...++.+++...+..+.+...+++|++++.+..+++.+..+++.+++++.++++|++.+.|.....
T Consensus 115 ~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~ 194 (332)
T PLN02548 115 VVGGERSLVANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIMLVAEHAAANNKTFMMNLSAPFICEFFK 194 (332)
T ss_pred EecCCceeeeccchhhcCCHHHhcChhhHhHHhhCCEEEEEEEEccCCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhH
Confidence 77888888777666656666655432234567899999999987767788889999999999999999998777755556
Q ss_pred HHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeC
Q 020650 186 DALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVL 265 (323)
Q Consensus 186 ~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~ 265 (323)
+.++.+++++|++++|++|++.+++..+.+.++.++.++++.+..+....+.+.+|+|+|++|++++++++.+++|++++
T Consensus 195 ~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~ 274 (332)
T PLN02548 195 DQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPL 274 (332)
T ss_pred HHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEeccccC
Confidence 66889999999999999999999876554445666666655321100123578999999999999998888888887655
Q ss_pred CCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCCCC
Q 020650 266 PKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 322 (323)
Q Consensus 266 ~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~~~ 322 (323)
++.+++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|+.+|.++.|
T Consensus 275 ~~~~vvDttGAGDaF~ag~l~~l~~g~~l~eal~~a~aaAa~~v~~~G~~~~~~~~~ 331 (332)
T PLN02548 275 PKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGNYAANVIIQRSGCTYPEKPDF 331 (332)
T ss_pred CcCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCCCCCCCccC
Confidence 566899999999999999999999999999999999999999999999999988876
|
|
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=337.85 Aligned_cols=293 Identities=47% Similarity=0.733 Sum_probs=248.7
Q ss_pred ceEEEeCCceeeeEeecChhHHhhH------HHHhhcC-----------CceeecCchHHHHHHHHHHhcCCCCcEEEEe
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKY------DEMASKY-----------NVEYIAGGATQNSIRVAQWMLQIPGATSYIG 67 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~------~~~~~~~-----------~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~ 67 (323)
.+|+|+|++++|++..+++ +|.+ ++..... +....+||.+.|+|.+|++ +| .++.++|
T Consensus 2 ~~v~~vG~~~~D~~~~v~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~i~ 76 (312)
T cd01168 2 YDVLGLGNALVDILAQVDD--AFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIRGAAA-LG--GSAAFIG 76 (312)
T ss_pred ceEEEECCCeEEEEEecCH--HHHHHcCCCCCceeecCHHHHHHHHHhcCccccCCCHHHHHHHHHHH-hc--CCeEEEE
Confidence 4799999999999999999 5532 3333332 4678899999999999998 56 9999999
Q ss_pred eeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEe
Q 020650 68 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 146 (323)
Q Consensus 68 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 146 (323)
.+|+|.+|+.+++.|+++||+++++...+.+|+.++++++ +|+|+++.+.++...++++++.. +.+++++++|++
T Consensus 77 ~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~~ 152 (312)
T cd01168 77 RVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDDLDW----SLLAKAKYLYLE 152 (312)
T ss_pred EeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcCCCceeeecccchhhcCChhHCCH----HHHccCCEEEEE
Confidence 9999999999999999999999998755678999998887 78998888877777788777752 568899999999
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 020650 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 226 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l 226 (323)
++.+..+++.+..+++.+++.+.++++|+..+.+.+...+.++.+++++|++++|++|++.+++. +.++..++++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---~~~~~~~~a~~l 229 (312)
T cd01168 153 GYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAALKL 229 (312)
T ss_pred EEecCCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCC---CCCChHHHHHHH
Confidence 98665666889999999999999999999765544445566788999999999999999999863 124567778888
Q ss_pred hcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHH
Q 020650 227 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSH 306 (323)
Q Consensus 227 ~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa 306 (323)
.+.+++.+|+|+|++|++++++++.+++|+++ +++++|||||||+|+|||+++|++|+++++|+++|+++|+
T Consensus 230 ------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvDttGAGDaf~ag~l~~l~~g~~~~~a~~~a~~~Aa 301 (312)
T cd01168 230 ------LALRCRIVVITQGAKGAVVVEGGEVYPVPAIP--VEKIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGSYAAA 301 (312)
T ss_pred ------HhcCCCEEEEecCCCCeEEEECCEEEeCCCCC--CCCcccCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 66789999999999999999888888877654 1479999999999999999999999999999999999999
Q ss_pred HHhhhcCccCC
Q 020650 307 VIIQRSGCTYP 317 (323)
Q Consensus 307 ~~~~~~G~~~p 317 (323)
++|++.|+.+|
T Consensus 302 ~~v~~~G~~~~ 312 (312)
T cd01168 302 EVIQQLGPRLP 312 (312)
T ss_pred HHHhccCCCCC
Confidence 99999998754
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-46 Score=309.18 Aligned_cols=317 Identities=66% Similarity=1.125 Sum_probs=290.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhH------------------HHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEe
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKY------------------DEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 67 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~------------------~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~ 67 (323)
..+.+|++.+|+...++..++.++ ++..+..+....+||++.|++++++++++.+..+.++|
T Consensus 8 il~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~f~G 87 (343)
T KOG2854|consen 8 ILVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATVFFG 87 (343)
T ss_pred eeeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceEEEe
Confidence 455679999999999998777666 55667778889999999999999998766445999999
Q ss_pred eeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEec
Q 020650 68 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAG 147 (323)
Q Consensus 68 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~ 147 (323)
.+|.|.+|+++.+.+++.||+..+...++.+|++|.+++++..|++..+.++...++.+++++++++..++++.++|+.|
T Consensus 88 svG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~~~nRSL~anLgAAn~f~~dhl~~~~~~~lveka~v~yv~G 167 (343)
T KOG2854|consen 88 SVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLITGDNRSLCANLGAANCFKVDHLDKEENWALVEKAKVFYVAG 167 (343)
T ss_pred eccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEeCCCcchhhccchhhccCHHHhcchhhhhhhhheeEEEEEE
Confidence 99999999999999999999999998889999999999986669999999999999999999988899999999999999
Q ss_pred cccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHh
Q 020650 148 FFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLS 227 (323)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~ 227 (323)
+++.+.|+.++.+.+++.+.+.++.+|++.+...+...+.+...++++|++|.|++|+++++...++...+..+.+..+.
T Consensus 168 ffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv~eia~~~~ 247 (343)
T KOG2854|consen 168 FFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDVKEIALKLS 247 (343)
T ss_pred EEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccchHHHhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888888877
Q ss_pred cCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHH
Q 020650 228 QWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHV 307 (323)
Q Consensus 228 ~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~ 307 (323)
.+.+......++++||.|..++++..+++.+.++..+.+..+++||+||||+|.+||+++|.+|.++++|++.++.+|+.
T Consensus 248 ~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~l~~cir~g~~aa~~ 327 (343)
T KOG2854|consen 248 ALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKSLEECIRAGSYAASH 327 (343)
T ss_pred ccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHhhh
Confidence 76664556788999999999999998888888887777788999999999999999999999999999999999999999
Q ss_pred HhhhcCccCCCCCCC
Q 020650 308 IIQRSGCTYPEKPEF 322 (323)
Q Consensus 308 ~~~~~G~~~p~~~~~ 322 (323)
+++..|+++|+.++|
T Consensus 328 vi~~~G~~~p~~~~~ 342 (343)
T KOG2854|consen 328 VIRRVGCTVPEKPDF 342 (343)
T ss_pred eeeccCCCCCCCCCC
Confidence 999999999998887
|
|
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-47 Score=333.73 Aligned_cols=292 Identities=23% Similarity=0.344 Sum_probs=245.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++..+++ +|.++..+...+....+||.+.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 3 ~~i~~iG~~~~D~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~Nva~~la~-lG--~~~~~~~~vG~D~~g~~i~~~L~~ 77 (306)
T PRK11142 3 GKLVVLGSINADHVLNLES--FPRPGETLTGRHYQVAFGGKGANQAVAAAR-LG--ADIAFIACVGDDSIGESMRQQLAK 77 (306)
T ss_pred CcEEEECCceeeEEEEeCC--CCCCCCeeEeccceecCCCcHHHHHHHHHh-cC--CcEEEEEEECCChhHHHHHHHHHH
Confidence 3799999999999999998 777788888888899999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+||+++++. .++.+|+.+++..+ +|+|++..+.++...+++++++. ..+.+..++++|+++ ..+.+.+..+++
T Consensus 78 ~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~v~~~~---~~~~~~~~~~~~ 152 (306)
T PRK11142 78 DGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEA--HRELIANADALLMQL---ETPLETVLAAAK 152 (306)
T ss_pred cCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeCCccccCCHHHHHH--HHhhhccCCEEEEeC---CCCHHHHHHHHH
Confidence 999999985 56778999988876 68888877777666666665542 235578999999975 235578889999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.+++++.++++|+.... +....+++++|++++|++|++.+++....+.++..++++.+ ...+++.+++
T Consensus 153 ~a~~~g~~v~~d~~~~~------~~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vvv 220 (306)
T PRK11142 153 IAKQHGTKVILNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVL------HQKGIETVLI 220 (306)
T ss_pred HHHHcCCEEEEECCCCc------ccCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHH------HHhCCCeEEE
Confidence 99999999999986421 11346788999999999999999875443334566777777 5668999999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--CCCCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKP 320 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p~~~ 320 (323)
|+|++|++++++++.+++++++ ++++||+||||+|.|||+++|++|+++++|+++|+++|+++|++.|+. .|+.+
T Consensus 221 t~G~~G~~~~~~~~~~~~~~~~---v~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~Aa~~~~~~G~~~~~~~~~ 297 (306)
T PRK11142 221 TLGSRGVWLSENGEGQRVPGFR---VQAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIAVTRKGAQPSIPWRE 297 (306)
T ss_pred EECCCcEEEEeCCcceeccCCC---cccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCCcccccCCCHH
Confidence 9999999998888777777654 479999999999999999999999999999999999999999999985 46554
Q ss_pred C
Q 020650 321 E 321 (323)
Q Consensus 321 ~ 321 (323)
+
T Consensus 298 ~ 298 (306)
T PRK11142 298 E 298 (306)
T ss_pred H
Confidence 4
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-45 Score=329.37 Aligned_cols=296 Identities=21% Similarity=0.303 Sum_probs=242.6
Q ss_pred cceEEEeCCceeeeEeecChhH-----HhhHH-------------HHhhcCCceeecCchHHHHHHHHHHhcCC------
Q 020650 4 EGILLGMGNPLLDISSVVDDDF-----LNKYD-------------EMASKYNVEYIAGGATQNSIRVAQWMLQI------ 59 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~-----~~~~~-------------~~~~~~~~~~~~GG~~~n~a~~l~~l~g~------ 59 (323)
+.+|+++|++++|++..+++.+ +|+.+ +..........+||++.|+|.+|++ +|.
T Consensus 69 ~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~Avalar-LG~~~~~~~ 147 (426)
T PLN02813 69 RWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALAR-LGSQSAAGP 147 (426)
T ss_pred cceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHHH-hccccccCC
Confidence 5689999999999999998843 44444 4445666789999999999999998 441
Q ss_pred CCcEEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhc
Q 020650 60 PGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVE 138 (323)
Q Consensus 60 g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (323)
..+|.++|.+|+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..++++++. .+.++
T Consensus 148 ~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~~gertii~~~Ga~~~l~~~~~~----~~~i~ 223 (426)
T PLN02813 148 ALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCL----ASAIS 223 (426)
T ss_pred CCcEEEEEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcCCCCceeeeccCchhhCCccccC----HHHHh
Confidence 158999999999999999999999999999988766678999988886 7999998888877666655442 35688
Q ss_pred cccEEEEeccccccCH--HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHH-HHhhcCCCcEEEeCHHHHHHHHhhcCCC
Q 020650 139 KAKYFYIAGFFLTVSP--DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDA-LEKVLPYMDYIFGNETEARTFSKVQGWE 215 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~l~~~dvl~~n~~e~~~l~~~~~~~ 215 (323)
+++++|++++.+..+. +.+.++++.+++.|.++++|+++......+++. .+.+++++|++++|++|+..+++...
T Consensus 224 ~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~~~-- 301 (426)
T PLN02813 224 KSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGLGS-- 301 (426)
T ss_pred cCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHhcCCEEEeCHHHHHHHhCCCC--
Confidence 9999999987654443 678889999999999999998865332222333 34566899999999999999987421
Q ss_pred CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC-CH
Q 020650 216 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-PI 294 (323)
Q Consensus 216 ~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~-~~ 294 (323)
.++.+++++.+ . .+.+.+|||+|++|++++++++.+++|++++ +++|||||||+|.|||+|+|++|+ ++
T Consensus 302 ~~~~~~a~~~L------~-~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v---~vVDTtGAGDAF~Agfl~~l~~G~~~l 371 (426)
T PLN02813 302 EESPESATRYL------S-HFCPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYAAGILYGLLRGVSDL 371 (426)
T ss_pred CCCHHHHHHHH------H-cCCCEEEEEeCCCCeEEEECCEEEEeCCCCC---CcccCCChHHHHHHHHHHHHHcCCCCH
Confidence 24577777766 3 3578999999999999998888888887644 799999999999999999999999 99
Q ss_pred HHHHHHHhHHHHHHhhhcCccC
Q 020650 295 EECVRAGCYTSHVIIQRSGCTY 316 (323)
Q Consensus 295 ~~a~~~A~~~Aa~~~~~~G~~~ 316 (323)
++|+++|+++|+++|++.|+..
T Consensus 372 ~~al~~A~a~Aa~~v~~~Ga~~ 393 (426)
T PLN02813 372 RGMGELAARVAATVVGQQGTRL 393 (426)
T ss_pred HHHHHHHHHHHHHHHcccCCCc
Confidence 9999999999999999999953
|
|
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-46 Score=330.27 Aligned_cols=299 Identities=22% Similarity=0.301 Sum_probs=245.4
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
.+++|+|+|++++|++..+++ +|.++...........+||.+.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|
T Consensus 14 ~~~~vlviG~~~vD~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-lG--~~~~~is~vG~D~~g~~i~~~l 88 (326)
T PTZ00292 14 AEPDVVVVGSSNTDLIGYVDR--MPQVGETLHGTSFHKGFGGKGANQAVMASK-LG--AKVAMVGMVGTDGFGSDTIKNF 88 (326)
T ss_pred CCCCEEEEccceeeEEEecCC--CCCCCCceeecCceeCCCCcHHHHHHHHHH-cC--CCeEEEEEECCChhHHHHHHHH
Confidence 356899999999999999998 777778888888889999999999999998 56 9999999999999999999999
Q ss_pred HHcCceeEEe-ecCCCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhcc-ccEEEEeccccccCHHHHH
Q 020650 83 KLAGVNVHYY-EDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEK-AKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 83 ~~~gi~~~~~-~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~i~~~~~~~~~~~~~ 158 (323)
+++||+++++ ..++.+|+.++++++ +|+|+++.+.+++..+++++++. ....+.. ++++++++ ..+.+...
T Consensus 89 ~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~~~~~~~~~---~~~~~~~~ 163 (326)
T PTZ00292 89 KRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDA--QTDNIQNICKYLICQN---EIPLETTL 163 (326)
T ss_pred HHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHH--HHHHhhhhCCEEEECC---CCCHHHHH
Confidence 9999999998 466778999988876 57888877777666666665542 2344666 89999874 34567788
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
++++.+++.+.++++|+++.... ...+.++.+++++|++++|++|++.+++....+.++..++++.+ ...+.+
T Consensus 164 ~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 236 (326)
T PTZ00292 164 DALKEAKERGCYTVFNPAPAPKL-AEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKEL------QQLGVE 236 (326)
T ss_pred HHHHHHHHcCCEEEEECCCCccc-cccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCC
Confidence 89999999999999999643210 01245778899999999999999999875433334455666667 556889
Q ss_pred EEEEeeCCCceEEeeCCe-eeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--
Q 020650 239 TAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT-- 315 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~-~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~-- 315 (323)
.+++|+|++|+++++++. .+++|+++ .+++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|+.
T Consensus 237 ~vvvT~G~~Ga~~~~~~~~~~~~~~~~---~~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~Aa~~v~~~G~~~~ 313 (326)
T PTZ00292 237 NVIITLGANGCLIVEKENEPVHVPGKR---VKAVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTQSS 313 (326)
T ss_pred eEEEEeCCCcEEEEeCCCceEEccCCc---cccCCCcchHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCCCcccc
Confidence 999999999999987664 47777544 479999999999999999999999999999999999999999999996
Q ss_pred CCCCCC
Q 020650 316 YPEKPE 321 (323)
Q Consensus 316 ~p~~~~ 321 (323)
+|+.++
T Consensus 314 ~~~~~~ 319 (326)
T PTZ00292 314 YPHPSE 319 (326)
T ss_pred CCCHHH
Confidence 465544
|
|
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=321.75 Aligned_cols=286 Identities=24% Similarity=0.356 Sum_probs=242.8
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ +|.++..........++||.+.|+|..|++ +| .++.++|.+|+|.+|+.+++.|+++
T Consensus 1 ~il~iG~~~~D~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~~~~~~~vG~D~~g~~i~~~l~~~ 75 (292)
T cd01174 1 KVVVVGSINVDLVTRVDR--LPKPGETVLGSSFETGPGGKGANQAVAAAR-LG--ARVAMIGAVGDDAFGDELLENLREE 75 (292)
T ss_pred CEEEEeeceeEEEEEecC--CCCCCCcEEeccceecCCCcHHHHHHHHHH-cC--CceEEEEEEcCCccHHHHHHHHHHc
Confidence 589999999999999888 677777788888889999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEe-ecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHH
Q 020650 86 GVNVHYY-EDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 163 (323)
||+++++ ..++.+|+.+.+..+ +|+|+++.+.++...+++++++. ..+.++.++++++++ ..+.+.+..+++.
T Consensus 76 gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~~~~~~ 150 (292)
T cd01174 76 GIDVSYVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDA--ALELIAAADVLLLQL---EIPLETVLAALRA 150 (292)
T ss_pred CCCceEEEEcCCCCceeEEEEEcCCCceEEEEeCCCCCCCCHHHHHH--HHHhcccCCEEEEeC---CCCHHHHHHHHHH
Confidence 9999998 466778999988886 68888877766655555554432 345678999999985 3456788899999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++++.++++|+.... +..+.+++++|++++|++|++.+++....+.++.+++++.+ ...+++.+++|
T Consensus 151 a~~~g~~v~~D~~~~~------~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l------~~~g~~~vvvt 218 (292)
T cd01174 151 ARRAGVTVILNPAPAR------PLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLL------LAKGVKNVIVT 218 (292)
T ss_pred HHhcCCEEEEeCCCcC------cCcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEE
Confidence 9999999999997532 12357889999999999999999876554444566777887 66789999999
Q ss_pred eCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC
Q 020650 244 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY 316 (323)
Q Consensus 244 ~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~ 316 (323)
+|++|++++++++.+++++++ .+++|++||||+|.|||+++|++|+++++|+++|+++|+.++++.|+..
T Consensus 219 ~G~~G~~~~~~~~~~~~~~~~---~~~vdt~GaGD~F~ag~l~~l~~g~~~~~al~~a~~~Aa~~~~~~G~~~ 288 (292)
T cd01174 219 LGAKGALLASGGEVEHVPAFK---VKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQP 288 (292)
T ss_pred eCCCceEEEeCCceEEecCCC---cccCCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCCC
Confidence 999999999888877777654 4789999999999999999999999999999999999999999999953
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=326.79 Aligned_cols=298 Identities=18% Similarity=0.201 Sum_probs=234.8
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhh-----------cCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecC
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMAS-----------KYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKD 72 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~-----------~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D 72 (323)
+++|+++|++++|++..+++ +|.++.... .......+|| ++|+|.+|++ +| .++.++|.+|+|
T Consensus 72 ~~~vl~lG~~~vD~i~~V~~--lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaLar-LG--~~v~lig~VG~D 145 (470)
T PLN02341 72 EIDVATLGNLCVDIVLPVPE--LPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAAAR-LG--LRCSTIGHVGDE 145 (470)
T ss_pred cccEEEECCcceeEEEecCC--CCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHHHH-cC--CCeEEEEEecCc
Confidence 45899999999999999999 666654321 1334556788 6899999998 56 999999999999
Q ss_pred chhHHHHHHHHHcCceeEEeec-C--------CCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccc
Q 020650 73 KFGEEMKKNSKLAGVNVHYYED-E--------SASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKA 140 (323)
Q Consensus 73 ~~g~~i~~~l~~~gi~~~~~~~-~--------~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 140 (323)
.+|+.+++.|+++||+++++.. . ..+|+.++++++ +|++.++...+.......+++.. ++..+.++++
T Consensus 146 ~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~a 225 (470)
T PLN02341 146 IYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFSWISKLSAEAKMAIRQS 225 (470)
T ss_pred HHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccchhhhhcccHHHHhhhhcC
Confidence 9999999999999999999853 3 246888888886 67766543322222222122211 2234568899
Q ss_pred cEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCch---hHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 141 KYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAP---FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 141 ~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
|++|++++.+ .++++.+.++++.+++.|.++++|+... .|. +...+.++.+++++|++++|++|++.+++.
T Consensus 226 div~lsg~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Dil~~Ne~Ea~~l~g~--- 302 (470)
T PLN02341 226 KALFCNGYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAEALTGI--- 302 (470)
T ss_pred CEEEEeceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCEEEecHHHHHHHhCC---
Confidence 9999999864 4667889999999999999999999643 111 112345788999999999999999999863
Q ss_pred CCCCHHHHHHHHhcCCccccCC--ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC
Q 020650 215 ETDDVEEIALKLSQWPKASEIR--KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292 (323)
Q Consensus 215 ~~~~~~~~~~~l~~~~~~~~~~--~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~ 292 (323)
++.+++++.+ ...+ .+.+|||+|++|++++++++.+++|+++ ++++|||||||+|.|||+++|++|+
T Consensus 303 --~~~~~a~~~l------~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~---v~vVDTtGAGDaF~Agfl~gll~G~ 371 (470)
T PLN02341 303 --RNPILAGQEL------LRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFK---VNVVDTVGCGDSFAAAIALGYIHNL 371 (470)
T ss_pred --CCHHHHHHHH------HhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCC---cCCCCCcCccHHHHHHHHHHHHcCC
Confidence 5677888887 4344 5899999999999999988888887654 4799999999999999999999999
Q ss_pred CHHHHHHHHhHHHHHHhhhcCc--cCCCCCC
Q 020650 293 PIEECVRAGCYTSHVIIQRSGC--TYPEKPE 321 (323)
Q Consensus 293 ~~~~a~~~A~~~Aa~~~~~~G~--~~p~~~~ 321 (323)
++++|+++|+++|++++++.|+ .+|+.++
T Consensus 372 ~l~eal~~A~a~aA~~v~~~Ga~~~~p~~~e 402 (470)
T PLN02341 372 PLVNTLTLANAVGAATAMGCGAGRNVATLEK 402 (470)
T ss_pred CHHHHHHHHHHHHHHHHcCcCCCCCCCCHHH
Confidence 9999999999999999999997 4676654
|
|
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=312.24 Aligned_cols=296 Identities=24% Similarity=0.358 Sum_probs=240.9
Q ss_pred ccceEEEeC-CceeeeEeecChhHHhhHH---------------HH-hh-----------cCCceeecCchHHHHHHHHH
Q 020650 3 QEGILLGMG-NPLLDISSVVDDDFLNKYD---------------EM-AS-----------KYNVEYIAGGATQNSIRVAQ 54 (323)
Q Consensus 3 ~~~~i~viG-~~~iD~~~~~~~~~~~~~~---------------~~-~~-----------~~~~~~~~GG~~~n~a~~l~ 54 (323)
++++|+.|| +..+|+...++..++.+.+ .. .. ......++||++.|++.+++
T Consensus 18 ~~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la 97 (367)
T PLN02379 18 RPPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLS 97 (367)
T ss_pred CCCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHH
Confidence 357899999 9999999999876655530 00 11 11356779999999999988
Q ss_pred HhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcch
Q 020650 55 WMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPEN 133 (323)
Q Consensus 55 ~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (323)
+.+| .++.++|.+|+|..|+++++.|++.||+++.+...+.+|+.++++++ +|+|++..+.+....++++++..
T Consensus 98 ~~LG--~~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~dgert~~~~lg~~~~l~~~~~~~--- 172 (367)
T PLN02379 98 AGFG--VSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDALGNRTMRPCLSSAVKLQADELTK--- 172 (367)
T ss_pred HhcC--CCEEEEEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECCCCCccccCCccccccCChhHCCH---
Confidence 4345 99999999999999999999999999999887655568999998886 78998877666666666666653
Q ss_pred hhhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHHhh
Q 020650 134 WALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKV 211 (323)
Q Consensus 134 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~~~ 211 (323)
+.+++++++|++ +. ..+++.+.++++.++++|+++.+|++.+...+.+++.+..+++ ++|++++|++|++.+++.
T Consensus 173 -~~~~~~~~v~v~-~~-~~~~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~~ 249 (367)
T PLN02379 173 -EDFKGSKWLVLR-YG-FYNLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLRG 249 (367)
T ss_pred -HHHhcCCEEEEE-cc-cCCHHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHHHHhcC
Confidence 567899999999 42 2467889999999999999999999887655556666777774 899999999999999863
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC
Q 020650 212 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291 (323)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g 291 (323)
.+ .++.+++.+.+ ..+++.++||+|++|++++++++.+++++++ ..+++|||||||+|.|||+|+|.+|
T Consensus 250 ~~--~~~~~~~~~~l-------~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~--~~~vVDTtGAGDaFaagfl~gl~~G 318 (367)
T PLN02379 250 EQ--ESDPEAALEFL-------AKYCNWAVVTLGSKGCIARHGKEVVRVPAIG--ETNAVDATGAGDLFASGFLYGLIKG 318 (367)
T ss_pred CC--CCCHHHHHHHH-------HhcCCEEEEEECCCCeEEEECCEEEEecCCC--CCCcccCCChhHHHHHHHHHHHHCC
Confidence 22 23566666555 3357899999999999999988888887643 2478999999999999999999999
Q ss_pred CCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 292 KPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 292 ~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
+++++|+++|+++|+.+|++.|++++
T Consensus 319 ~~l~~a~~~g~~aAa~vi~~~G~~~~ 344 (367)
T PLN02379 319 LSLEECCKVGACSGGSVVRALGGEVT 344 (367)
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999744
|
|
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=312.71 Aligned_cols=296 Identities=18% Similarity=0.284 Sum_probs=235.9
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHH-------------------HHhhcCC-ceeecCchHHHHHHHHHHhcCCCCcE
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYD-------------------EMASKYN-VEYIAGGATQNSIRVAQWMLQIPGAT 63 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~GG~~~n~a~~l~~l~g~g~~v 63 (323)
..+|+++|+..+|+...++..++.+.+ ....... ....+||++.|+|+++++ +| |.++
T Consensus 33 ~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~~~~~~~~GGsaaNtA~~lAr-LG-G~~~ 110 (434)
T PRK15074 33 RTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNNLITHEFAGGTIGNTLHNYSV-LA-DDRS 110 (434)
T ss_pred CCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHH-cC-CCCe
Confidence 358999999999999999886665541 1111111 345699999999999998 42 4899
Q ss_pred EEEeeeecC-chhHHHHHHHH--HcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhcc
Q 020650 64 SYIGCIGKD-KFGEEMKKNSK--LAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEK 139 (323)
Q Consensus 64 ~~~~~vG~D-~~g~~i~~~l~--~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (323)
.++|.||+| .+|+++++.|+ +.||+++++...+.+|+.++++++ +|+|+++.+.++...++++++.. +.+++
T Consensus 111 ~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~dGeRt~~t~~GA~~~Lt~edld~----~~i~~ 186 (434)
T PRK15074 111 VLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISEDGERTFAISPGHMNQLRPESIPE----DVIAG 186 (434)
T ss_pred EEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECCCCCEEEEEecChhhcCChhHCCH----hHhcc
Confidence 999999999 69999999997 689999998654457999999986 89999999999888898888863 56899
Q ss_pred ccEEEEeccccc-----cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 140 AKYFYIAGFFLT-----VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDAL-EKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 140 ~~~v~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
++++|++++.+. ..++...++++.+++.|+++++|++.........+.+ ..+++++|++++|++|+..+++
T Consensus 187 a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~LtG--- 263 (434)
T PRK15074 187 ASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEALTG--- 263 (434)
T ss_pred CCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHHHhC---
Confidence 999999998753 2357788999999999999999998764322222223 3456799999999999999986
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCe-------ee----------------------------
Q 020650 214 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGK-------LK---------------------------- 258 (323)
Q Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~-------~~---------------------------- 258 (323)
.++++++++.+ .. .++.++||+|++|++++..++ .+
T Consensus 264 --~~d~eea~~~L------~~-~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK15074 264 --ESDPLLASDKA------LD-WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPL 334 (434)
T ss_pred --CCCHHHHHHHH------Hc-CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhcccccccc
Confidence 35777888877 33 368999999999999964222 11
Q ss_pred ----EEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC--------------------CHHHHHHHHhHHHHHHhhhcCc
Q 020650 259 ----KFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK--------------------PIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 259 ----~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~--------------------~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
+++++...+++++|||||||+|.|||+|+|.+|+ ++++|+++|+++|+.++++.|+
T Consensus 335 ~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~ 414 (434)
T PRK15074 335 RVYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSP 414 (434)
T ss_pred ccccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCC
Confidence 5554422245799999999999999999999998 8999999999999999999999
Q ss_pred cCC
Q 020650 315 TYP 317 (323)
Q Consensus 315 ~~p 317 (323)
++|
T Consensus 415 ~~~ 417 (434)
T PRK15074 415 RLS 417 (434)
T ss_pred CCC
Confidence 544
|
|
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=308.45 Aligned_cols=277 Identities=23% Similarity=0.322 Sum_probs=228.3
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ +|..++.++..+...++||.+.|+|..|++ +| .++.++|.+|+|..|+.+++.|++.
T Consensus 1 ~i~~iG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~~~~~~~vG~D~~g~~i~~~l~~~ 75 (284)
T cd01945 1 RVLGVGLAVLDLIYLVAS--FPGGDGKIVATDYAVIGGGNAANAAVAVAR-LG--GQARLIGVVGDDAIGRLILAELAAE 75 (284)
T ss_pred CEEEECcceeEEEEEecc--CCCCCCeEEEeEEEEecCCHHHHHHHHHHH-cC--CCeEEEEEecCchHHHHHHHHHHHc
Confidence 589999999999999988 777777778888899999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEeec-CCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHH
Q 020650 86 GVNVHYYED-ESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164 (323)
Q Consensus 86 gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 164 (323)
||+++++.. ++.+|+++++...+++++...+.+....+..+++.. ..+++++++|++++. ++....+++.+
T Consensus 76 gI~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~i~~~~----~~~~~~~~~~~ 147 (284)
T cd01945 76 GVDTSFIVVAPGARSPISSITDITGDRATISITAIDTQAAPDSLPD----AILGGADAVLVDGRQ----PEAALHLAQEA 147 (284)
T ss_pred CCCccceeecCCCCCccEEEEccCCCceEEEecCCCCCCCcccCCH----HHhCcCCEEEEcCCC----HHHHHHHHHHH
Confidence 999999864 556788877644467777666655555566666543 347999999998753 46778899999
Q ss_pred HhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEee
Q 020650 165 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 244 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~ 244 (323)
++.+.++.+|+....+ .+ ++.+++++|++++|++|++.+++. .+. ++++.+ ...+.+.++||+
T Consensus 148 ~~~g~~v~~~~~~~~~----~~-~~~~~~~~dil~~n~~e~~~l~~~-----~~~-~~~~~l------~~~~~~~vivt~ 210 (284)
T cd01945 148 RARGIPIPLDLDGGGL----RV-LEELLPLADHAICSENFLRPNTGS-----ADD-EALELL------ASLGIPFVAVTL 210 (284)
T ss_pred HHcCCCeeEeccCCcc----cc-hHHHhccCCEEEeChhHHhhhcCC-----CHH-HHHHHH------HhcCCcEEEEEE
Confidence 9998855444433221 22 677889999999999999988752 222 666666 567899999999
Q ss_pred CCCceEEee-CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc
Q 020650 245 GADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315 (323)
Q Consensus 245 G~~G~~~~~-~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~ 315 (323)
|++|+++++ +++.+++++++ ++++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|+.
T Consensus 211 G~~G~~~~~~~~~~~~~~~~~---~~vvDt~GAGDaf~ag~l~~l~~g~~~~~al~~a~~~Aa~~~~~~G~~ 279 (284)
T cd01945 211 GEAGCLWLERDGELFHVPAFP---VEVVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAAALKCRGLGGR 279 (284)
T ss_pred CCCCeEEEcCCCCEEecCCCc---cccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCCc
Confidence 999999998 66777777653 479999999999999999999999999999999999999999999985
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=307.07 Aligned_cols=284 Identities=21% Similarity=0.297 Sum_probs=228.1
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ +|.++...+.......+|| +.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++.
T Consensus 1 ~i~~iG~~~~D~i~~~~~--~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~-lG--~~~~~~~~vG~D~~g~~i~~~l~~~ 74 (289)
T cd01944 1 KVLVIGAAVVDIVLDVDK--LPASGGDIEAKSKSYVIGG-GFNVMVAASR-LG--IPTVNAGPLGNGNWADQIRQAMRDE 74 (289)
T ss_pred CeEEEcceeEEEEeeccc--CCCCCCccccceeeeccCc-HHHHHHHHHH-cC--CCeEEEEEecCChHHHHHHHHHHHc
Confidence 589999999999999988 7777888888888999999 9999999998 56 9999999999999999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccC---HHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVS---PDSIQLVA 161 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~---~~~~~~~~ 161 (323)
||+++++...+..|+.++++++ +|+|+++.+.+++..+++++++. ..+.+.+++|++++.+... .+.+..++
T Consensus 75 gi~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (289)
T cd01944 75 GIEILLPPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFAT----LTVAPYDYVYLSGYTLASENASKVILLEWL 150 (289)
T ss_pred CCccccccccCCCCeEEEEEEcCCCceEEEEeCCccCCCCHHHhcc----ccCCCCCEEEEeCccccCcchhHHHHHHHH
Confidence 9999998666667887767766 78998877777666666666653 1367899999998764222 34555666
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAV 241 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv 241 (323)
+.++ .+.++++|+....+. ...+.++.+++++|++++|++|++.+++... .+....++.+ ...+.+.++
T Consensus 151 ~~~~-~~~~v~~D~~~~~~~-~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~~---~~~~~~~~~~------~~~~~~~vv 219 (289)
T cd01944 151 EALP-AGTTLVFDPGPRISD-IPDTILQALMAKRPIWSCNREEAAIFAERGD---PAAEASALRI------YAKTAAPVV 219 (289)
T ss_pred Hhcc-CCCEEEEcCcccccc-cCHHHHHHHHhcCCEEccCHHHHHHHhCCCC---cchHHHHHHH------HhccCCeEE
Confidence 5543 467888888643211 1234578889999999999999999987421 2223335556 556778999
Q ss_pred EeeCCCceEEee-CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 242 ITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 242 it~G~~G~~~~~-~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
+|+|++|+++++ ++..+++|+++ ++++|||||||+|.|||++++++|+++++|+++|+++|++++++.|
T Consensus 220 vt~G~~Ga~~~~~~~~~~~~~~~~---~~vvDt~GAGDaf~ag~l~~~~~g~~~~~a~~~a~a~aa~~~~~~G 289 (289)
T cd01944 220 VRLGSNGAWIRLPDGNTHIIPGFK---VKAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289 (289)
T ss_pred EEECCCcEEEEecCCCeEEecCCC---CCCccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhccCC
Confidence 999999999988 44566666543 4789999999999999999999999999999999999999999987
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-43 Score=309.24 Aligned_cols=289 Identities=18% Similarity=0.241 Sum_probs=226.2
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|..+++|+|+|++++|++..++. .+. +...........+||++.|+|.++++ +| .++.++|.+|+|..|+.+++
T Consensus 1 ~~~~~~i~~iG~~~vD~~~~~~~--~~~-~~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~~~~ig~vG~D~~g~~i~~ 74 (313)
T PRK09850 1 MREKDYVVIIGSANIDVAGYSHE--SLN-YADSNPGKIKFTPGGVGRNIAQNLAL-LG--NKAWLLSAVGSDFYGQSLLT 74 (313)
T ss_pred CCCCCcEEEECcEEEeeeccCCC--cCc-CCCCCceEEEEeCCcHHHHHHHHHHH-cC--CCeEEEEEecCchhHHHHHH
Confidence 66777999999999999988654 222 23334455778899999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEe-ecCCCCceeEEEEEe-CCccceeec-ccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHH
Q 020650 81 NSKLAGVNVHYY-EDESASTGTCAVCVV-GGERSLVAN-LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157 (323)
Q Consensus 81 ~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 157 (323)
.|++.||+++++ ..++.+|+.++++++ +|+|.+... .++...+..+.+.. ..+.+++++++++++ ..+.+.+
T Consensus 75 ~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~ 149 (313)
T PRK09850 75 QTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQ--HREFIQRAKVIVADC---NISEEAL 149 (313)
T ss_pred HHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecCchHhhhCCHHHHHH--HHHHHhcCCEEEEeC---CCCHHHH
Confidence 999999999997 456778999999886 677766443 23333343333321 234578899999976 3455666
Q ss_pred HHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc
Q 020650 158 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
..+++.+ .++++++|+.+. | ..+.++.+++.+|++++|++|++.+++....+.++++++++.+ ...+.
T Consensus 150 ~~~~~~~--~g~~v~~D~~~~-~---~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l------~~~g~ 217 (313)
T PRK09850 150 AWILDNA--ANVPVFVDPVSA-W---KCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWF------HQHGL 217 (313)
T ss_pred HHHHHhc--cCCCEEEEcCCH-H---HHHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCC
Confidence 6676643 478899998753 2 1234667889999999999999999875433344577777887 56788
Q ss_pred cEEEEeeCCCceEEeeCC-eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc
Q 020650 238 RTAVITQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~-~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~ 315 (323)
+.+|||+|++|+++++++ +..++|++ +++++|||||||+|.|||+++|.+|+++++|+++|+++|+++++..+..
T Consensus 218 ~~vvvT~G~~G~~~~~~~~~~~~~~~~---~~~vvDttGAGDaF~agfi~~l~~g~~~~eal~~a~a~aa~~~~~~~~~ 293 (313)
T PRK09850 218 NRLVLSMGGDGVYYSDISGESGWSAPI---KTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCEYTN 293 (313)
T ss_pred CEEEEEeCCceEEEEcCCCCeEecCCC---CcccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999998753 44555654 3489999999999999999999999999999999999999999999874
|
|
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-43 Score=306.56 Aligned_cols=288 Identities=26% Similarity=0.364 Sum_probs=242.6
Q ss_pred CCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeE
Q 020650 11 GNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVH 90 (323)
Q Consensus 11 G~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~ 90 (323)
|++++|++..+++ +|.++...+..+...++||.+.|+|..|++ +| .++.++|.+|+|..|+.+++.|++.||+++
T Consensus 1 G~~~~D~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~-lg--~~~~~~~~vG~D~~g~~i~~~l~~~gi~~~ 75 (293)
T TIGR02152 1 GSINMDLVLRTDR--LPKPGETVHGHSFQIGPGGKGANQAVAAAR-LG--AEVSMIGKVGDDAFGDELLENLKSNGIDTE 75 (293)
T ss_pred CCceEeEEEEeCC--CCCCCCcEecCCceecCCCcHHHHHHHHHH-CC--CCEEEEEEecCCccHHHHHHHHHHcCCCee
Confidence 7899999999998 788889999999999999999999999998 56 999999999999999999999999999999
Q ss_pred Eee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHHHhCC
Q 020650 91 YYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANN 168 (323)
Q Consensus 91 ~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~ 168 (323)
+++ ..+.+|+.++++.+ +++|+++.+.++...++++++.. ..+.++.++++++++ +.+.+.+..+++.+++++
T Consensus 76 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 150 (293)
T TIGR02152 76 YVGTVKDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDA--AEALIAESDIVLLQL---EIPLETVLEAAKIAKKHG 150 (293)
T ss_pred EEEEcCCCCCceEEEEEcCCCCEEEEEECCcCCcCCHHHHHH--HHhhhccCCEEEEec---CCCHHHHHHHHHHHHHcC
Confidence 986 45568999888876 58887776666655666665542 345678999999874 446678889999999999
Q ss_pred CeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc
Q 020650 169 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP 248 (323)
Q Consensus 169 ~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G 248 (323)
.++++|+.... ....+.+++++|++++|++|++.+++....+.++.+++++.+ ...|++.+++|+|++|
T Consensus 151 ~~v~~D~~~~~-----~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l------~~~g~~~vvvt~G~~g 219 (293)
T TIGR02152 151 VKVILNPAPAI-----KDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKL------LEKGVKNVIITLGSKG 219 (293)
T ss_pred CEEEEECCcCc-----ccchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHH------HHcCCCeEEEEeCCCc
Confidence 99999996532 111257789999999999999999876544445677788888 5668899999999999
Q ss_pred eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC--CCCCCC
Q 020650 249 VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY--PEKPEF 322 (323)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~--p~~~~~ 322 (323)
++++++++.+++++++ .+++||+||||+|+|||+++|++|+++++|+++|+++|++++++.|+.. |+.+++
T Consensus 220 ~~~~~~~~~~~~~~~~---~~~vdt~GAGDaf~Ag~l~~l~~g~~~~~al~~a~~~Aa~~~~~~G~~~~~~~~~~~ 292 (293)
T TIGR02152 220 ALLVSKDESKLIPAFK---VKAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKGAQSSIPYLEEV 292 (293)
T ss_pred eEEEeCCceeEccCCC---CceeCCCCcHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHcccCcccCCCChHHc
Confidence 9999888777776543 4789999999999999999999999999999999999999999999964 877765
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=310.96 Aligned_cols=292 Identities=26% Similarity=0.410 Sum_probs=237.2
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++..++. + ++...+.......+||.+.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~v~~iG~~~iD~~~~~~~--~--~~~~~~~~~~~~~~GG~~~n~a~~l~~-LG--~~v~~i~~vG~D~~g~~i~~~l~~ 74 (301)
T PF00294_consen 2 KKVLVIGEVNIDIIGYVDR--F--KGDLVRVSSVKRSPGGAGANVAIALAR-LG--ADVALIGKVGDDFFGEIILEELKE 74 (301)
T ss_dssp EEEEEESEEEEEEEEESSS--H--TTSEEEESEEEEEEESHHHHHHHHHHH-TT--SEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CcEEEECccceEEEeecCC--c--CCcceecceEEEecCcHHHHHHHHHHh-cc--CcceEEeeccCcchhhhhhhcccc
Confidence 4899999999999999987 4 344448888899999999999999998 66 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEec-cccc-cCHHHHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAG-FFLT-VSPDSIQLV 160 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~-~~~~-~~~~~~~~~ 160 (323)
.||+++++. ..+.+|+.++++.+ +|+|++..+.+....++.+++ ....+.+.+++++++ .... .+.+.+..+
T Consensus 75 ~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (301)
T PF00294_consen 75 RGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSPGANSDLTPDEL----DEEAIDEADILHLSGVSLPEGIPEDLLEAL 150 (301)
T ss_dssp TTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEEGGGGGGGHHHH----HHHHHHTESEEEEESGHCSTTSHHHHHHHH
T ss_pred ccccccccccccccccceeEeeecccccceeeeccccccccccccc----cccccccccceeecccccccccccceeeec
Confidence 999999986 56678999999887 678988887776666666555 346788999999999 3332 344667777
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
.+.+++.+. +......+.|.. ..+.+.++++.+|++++|++|+..+++... ++.+++.+.+.++ ...+++.+
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~~dil~~n~~E~~~l~~~~~---~~~~~~~~~~~~l---~~~g~~~v 222 (301)
T PF00294_consen 151 AKAAKKNGP-FDPVFRDPSWDD-LREDLKELLPYADILKPNEEEAEALTGSKI---DDPEDALAALREL---QARGVKIV 222 (301)
T ss_dssp HHHHHHTTE-EEEEEEGGGSHH-HHHHHHHHHHTSSEEEEEHHHHHHHHTCST---SSHHHHHHHHHHH---HHTTSSEE
T ss_pred ccccccccc-cccccccccccc-cchhhhhhccccchhccccccccccccccc---cchhhhhcccccc---chhhhhhh
Confidence 777777773 333333333322 456688888999999999999999988543 2444444443111 45688999
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
++|+|++|++++++++.+++++. ++.+++|+|||||+|+|||+++|++|+++++|+++|+++|++++++.|+..|
T Consensus 223 ivt~G~~G~~~~~~~~~~~~~~~--~~~~vvdttGAGD~f~A~~i~~l~~~~~~~~a~~~a~~~aa~~v~~~g~~~~ 297 (301)
T PF00294_consen 223 IVTLGEDGALYYTNDESYHVPPV--PPVNVVDTTGAGDAFAAGFIYGLLSGMSLEEALKFANAAAALKVQQPGPRSP 297 (301)
T ss_dssp EEEEGGGEEEEEETTEEEEEEEE--SSSSSSSCTTHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTSSSSSGG
T ss_pred hccccccCccccccccccccccc--ccccccceeccchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCcCC
Confidence 99999999999998999888864 4558999999999999999999999999999999999999999999999655
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=303.55 Aligned_cols=282 Identities=24% Similarity=0.351 Sum_probs=225.5
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+++|++++|++.... ......+||+++|+|.+|++ +| .++.++|.+|+|.+|+++++.|++
T Consensus 3 ~~il~iG~~~iD~~~~~~-------------~~~~~~~GG~~~N~a~~l~~-LG--~~~~~v~~vG~D~~g~~i~~~l~~ 66 (304)
T PRK09434 3 NKVWVLGDAVVDLIPEGE-------------NRYLKCPGGAPANVAVGIAR-LG--GESGFIGRVGDDPFGRFMQQTLQD 66 (304)
T ss_pred CcEEEecchheeeecCCC-------------CceeeCCCChHHHHHHHHHH-cC--CCceEEEEecCchHHHHHHHHHHH
Confidence 489999999999984311 13456799999999999998 56 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccccCH--HHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQ 158 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~--~~~~ 158 (323)
+||+++++. .++.+|+.+++..+ +|+|++.... ++...++.++++ .+++.+++|++++....++ +...
T Consensus 67 ~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (304)
T PRK09434 67 EGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP------PFRQGEWLHLCSIALSAEPSRSTTF 140 (304)
T ss_pred cCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh------hhcCCCEEEEccccccCchHHHHHH
Confidence 999999985 56778999988876 4778754332 222233333332 3678999999886543232 4567
Q ss_pred HHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc
Q 020650 159 LVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE 234 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (323)
.+++.+++++.++.+|+... .|. ....+.++.+++++|++++|++|+..+++ .++.+++++++ ..
T Consensus 141 ~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g-----~~~~~~~~~~l------~~ 209 (304)
T PRK09434 141 EAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSG-----TSQLEDAIYAL------AD 209 (304)
T ss_pred HHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhC-----CCCHHHHHHHH------Hh
Confidence 88889999999999988532 231 23456677889999999999999999876 24677888887 43
Q ss_pred -CCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC------CHHHHHHHHhHHHHH
Q 020650 235 -IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK------PIEECVRAGCYTSHV 307 (323)
Q Consensus 235 -~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~------~~~~a~~~A~~~Aa~ 307 (323)
.+++.++||+|++|++++++++.+++++++ .+++|||||||+|+|||+++|++|+ ++++|+++|+++|++
T Consensus 210 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~---~~~vDttGAGD~f~ag~~~~l~~g~~~~~~~~~~~a~~~a~~~Aa~ 286 (304)
T PRK09434 210 RYPIALLLVTLGAEGVLVHTRGQVQHFPAPS---VDPVDTTGAGDAFVAGLLAGLSQAGLWTDEAELAEIIAQAQACGAL 286 (304)
T ss_pred hcCCcEEEEEecCCceEEEeCCceeEeCCCC---CCCCcCCCchHHHHHHHHHHHHcCCCccchHHHHHHHHHHHHHHHH
Confidence 578899999999999999888888887644 4789999999999999999999997 899999999999999
Q ss_pred HhhhcCc--cCCCCCCC
Q 020650 308 IIQRSGC--TYPEKPEF 322 (323)
Q Consensus 308 ~~~~~G~--~~p~~~~~ 322 (323)
++++.|+ ..|..+++
T Consensus 287 ~v~~~g~~~~~~~~~~~ 303 (304)
T PRK09434 287 ATTAKGAMTALPNRQEL 303 (304)
T ss_pred HHcccCCcCCCCChHHc
Confidence 9999996 46776654
|
|
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=308.51 Aligned_cols=293 Identities=24% Similarity=0.318 Sum_probs=231.2
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
.+++|+++|+.++|++..+++ .|. .........+||++.|+|.+|++ +| .++.++|.+|+|..|+.+++.|
T Consensus 9 ~~~~i~~iG~~~vD~~~~~~~--~~~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~~L 79 (330)
T PLN02323 9 ESSLVVCFGEMLIDFVPTVSG--VSL----AEAPAFKKAPGGAPANVAVGISR-LG--GSSAFIGKVGDDEFGHMLADIL 79 (330)
T ss_pred CCCcEEEechhhhhhccCCCC--CCc----ccccceeecCCChHHHHHHHHHh-cC--CceeEEEEecCChhHHHHHHHH
Confidence 456899999999999988766 332 22445678999999999999998 56 9999999999999999999999
Q ss_pred HHcCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccccC--HHH
Q 020650 83 KLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVS--PDS 156 (323)
Q Consensus 83 ~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~--~~~ 156 (323)
+++||+++++. .++.+|+.+++..+ +|+|+++.+. ++...++++++.. +.++.++++|++++.+... ...
T Consensus 80 ~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 155 (330)
T PLN02323 80 KKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDL----DLIRKAKIFHYGSISLITEPCRSA 155 (330)
T ss_pred HHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCCh----HHHccCCEEEEechhccCchHHHH
Confidence 99999999985 56678999988875 7888876653 4444566666642 4578899999887653212 245
Q ss_pred HHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 157 IQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
+..+++.+++.|.++++|+.. ..|. ....+.++.+++++|++++|++|+..+++.. ..+..++. ++
T Consensus 156 ~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~---~~~~~~~~-~~------ 225 (330)
T PLN02323 156 HLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGD---DPDDDTVV-KL------ 225 (330)
T ss_pred HHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC---CccHHHHH-HH------
Confidence 678888999999999999863 2231 2245557788999999999999999997632 12233333 33
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCC-------HHHHHHHHhHHH
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-------IEECVRAGCYTS 305 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~A 305 (323)
...+.+.+|+|+|++|++++++++.++++++++ +++|||||||+|.|||+++|++|++ +++|+++|+++|
T Consensus 226 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~A 302 (330)
T PLN02323 226 WHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKV---KAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACG 302 (330)
T ss_pred HhcCCCEEEEecCCCceEEEeCCCceEeCCccC---CCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Confidence 335789999999999999998877777776543 7899999999999999999999986 899999999999
Q ss_pred HHHhhhcCc--cCCCCCC
Q 020650 306 HVIIQRSGC--TYPEKPE 321 (323)
Q Consensus 306 a~~~~~~G~--~~p~~~~ 321 (323)
++++++.|+ ..|+.++
T Consensus 303 a~~v~~~g~~~~~~~~~~ 320 (330)
T PLN02323 303 AITTTERGAIPALPTKEA 320 (330)
T ss_pred HHHHhccCCccCCCCHHH
Confidence 999999999 4566554
|
|
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=317.12 Aligned_cols=305 Identities=14% Similarity=0.163 Sum_probs=230.2
Q ss_pred cceEEEeCCceeeeEeecChh--HHhh------HHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchh
Q 020650 4 EGILLGMGNPLLDISSVVDDD--FLNK------YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFG 75 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~--~~~~------~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g 75 (323)
++.|+|+|++.+|++...... .+.. .+...+.......+||.+.|+|.+|++ +| .++.|+|.||+|.+|
T Consensus 196 ~~~V~~iGe~l~D~~p~g~~~~~l~~~~~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLAR-LG--~~v~fIg~VGdD~~G 272 (581)
T PLN02967 196 PPLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALAS-LG--GKVAFMGKLGDDDYG 272 (581)
T ss_pred CCeEEEECchhheecccCccchhhhhccccccccccccCccceeeecCcHHHHHHHHHHH-CC--CCEEEEEEeCCCHHH
Confidence 467999999999997642110 0000 011334566788899999999999998 56 999999999999999
Q ss_pred HHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhccccEEEEecccc--
Q 020650 76 EEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFL-- 150 (323)
Q Consensus 76 ~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~-- 150 (323)
+++++.|++.||+++++. .++.+|+.+++.++ +|+++++ ...+++..+.++++.. ..+..++++|++++.+
T Consensus 273 ~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~~~~gAd~~L~~~di~~----~~l~~A~i~hfgg~~ll~ 348 (581)
T PLN02967 273 QAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVKPCAEDSLSKSEINI----DVLKEAKMFYFNTHSLLD 348 (581)
T ss_pred HHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEEecCChhhhCChhhcCH----hHhcCCCEEEEeCchhcc
Confidence 999999999999999985 56778999999886 6777664 4567777777776653 5678999999998653
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEeC--CchhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCC---------
Q 020650 151 TVSPDSIQLVAEHAAANNKVFMMNL--SAPFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD--------- 217 (323)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~--------- 217 (323)
....+.+..+++.+++.|+++++|+ +.+.|. ....+.+..+++++|++++|++|+..+++.......
T Consensus 349 e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e~~~~~~~~~~ 428 (581)
T PLN02967 349 PTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEEFDTKDNDKSK 428 (581)
T ss_pred cchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCccccccccccchhc
Confidence 1223678899999999999988876 445562 234556788999999999999999999873210000
Q ss_pred ---CHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCc--ccCCCCcchHHHHHHHHHhhcC-
Q 020650 218 ---DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK--LVDTNGAGDAFVGGFLSQLVQE- 291 (323)
Q Consensus 218 ---~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~--~~d~tGAGDaf~ag~~~~l~~g- 291 (323)
...+.+..+ ...+++.++||+|++|+++++++...+++.++.+++. ++|||||||+|.|||+++|+++
T Consensus 429 ~~~~~~e~a~~l------~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAGDAF~AGfL~~Ll~g~ 502 (581)
T PLN02967 429 FVHYSPEVVAPL------WHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLMRMLTVQP 502 (581)
T ss_pred cccchHHHHHHH------HhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchhHHHHHHHHHHHHhcc
Confidence 012334445 4457899999999999999876543333322222223 5999999999999999999984
Q ss_pred ------CCHHHHHHHHhHHHHHHhhhcCc--cCCCCCC
Q 020650 292 ------KPIEECVRAGCYTSHVIIQRSGC--TYPEKPE 321 (323)
Q Consensus 292 ------~~~~~a~~~A~~~Aa~~~~~~G~--~~p~~~~ 321 (323)
+++++|++||+++||+++++.|+ .+|+.++
T Consensus 503 ~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~glPt~~e 540 (581)
T PLN02967 503 HLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKED 540 (581)
T ss_pred CcccccccHHHHHHHHHHHHHHHhccCCCccCCCCHHH
Confidence 67999999999999999999999 4565543
|
|
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=304.08 Aligned_cols=293 Identities=29% Similarity=0.400 Sum_probs=241.5
Q ss_pred eEEEeCCceeeeEee-cChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 6 ILLGMGNPLLDISSV-VDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 6 ~i~viG~~~iD~~~~-~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
+|+++|+.++|++.. .+. +|.++...........+||++.|+|+++++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 1 ~v~~iG~~~vD~~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~-lG--~~~~~~~~vG~D~~g~~~~~~l~~ 75 (311)
T COG0524 1 DVVVIGEANVDLIAQVVDR--LPEPGETVLGDFFKVAGGGKGANVAVALAR-LG--AKVALIGAVGDDDFGEFLLEELRK 75 (311)
T ss_pred CEEEECchhhheehhhccC--CCCCcccccccceeecCCchHHHHHHHHHH-cC--CceEEEEEecCcHHHHHHHHHHHH
Confidence 489999999999996 555 566666666666788999999999999998 56 899999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 161 (323)
.||+++++. ..+.+|+.+++.++ +|+|.+..+.+. ...+.++.+.. ..+...+++|++++.+..+++....++
T Consensus 76 ~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~ 151 (311)
T COG0524 76 EGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALLLTPEDLDE----DELAGADVLHISGIQLEIPPEALLAAL 151 (311)
T ss_pred cCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCcccccCChHHcCh----HHHhhcCeeeEEEeecCCChHHHHHHH
Confidence 999999985 45568999988886 689998887773 44566666552 557899999999988777778999999
Q ss_pred HHHHhCCCeEEEe--CCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 162 EHAAANNKVFMMN--LSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 162 ~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+.+++++.++.+| ++...|. .+.+..+++.+|++++|++|++.+++. ..+..+....+ ...+.+.
T Consensus 152 ~~a~~~g~~v~~d~~~~~~~~~---~~~~~~~l~~~d~~~~n~~E~~~l~g~----~~~~~~~~~~~------~~~~~~~ 218 (311)
T COG0524 152 ELAKAAGVTVSFDLNPRPALWD---RELLEELLALADILFPNEEEAELLTGL----EEDAEAAAALL------LAKGVKT 218 (311)
T ss_pred HHHHHcCCeEEEecCCCccccc---hhhHHHHHhhCCEEeCCHHHHHHHhCC----CccHHHHHHHH------hhcCCCE
Confidence 9999999885554 4544432 566889999999999999999999873 23455555556 6678999
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--CC
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YP 317 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p 317 (323)
+++|+|++|+++++++..++++..+.++++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.|+. .|
T Consensus 219 vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~p 298 (311)
T COG0524 219 VVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFANAAAALAVTRPGARPSLP 298 (311)
T ss_pred EEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhccCCCCCCCC
Confidence 9999999999999875434555444566789999999999999999999999999999999999999999999996 44
Q ss_pred CCC
Q 020650 318 EKP 320 (323)
Q Consensus 318 ~~~ 320 (323)
..+
T Consensus 299 ~~~ 301 (311)
T COG0524 299 TRE 301 (311)
T ss_pred CHH
Confidence 443
|
|
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-43 Score=307.47 Aligned_cols=293 Identities=17% Similarity=0.205 Sum_probs=225.5
Q ss_pred eEEEeCCceeeeEeecChhHHhh--HHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNK--YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~--~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+|+++|+.++|++..++...+|. +............+|| +.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 1 ~vl~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~~l~ 76 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGG-AANVANNLAS-LG--AKVTLLGVVGDDEAGDLLRKLLE 76 (304)
T ss_pred CEEEEcceeEEeeEeeccccccCCCCcceEEeeeEEecCcH-HHHHHHHHHH-hC--CCeEEEEEEcCCccHHHHHHHHH
Confidence 58999999999998753111222 1222333456678999 6899999998 56 99999999999999999999999
Q ss_pred HcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHH
Q 020650 84 LAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLV 160 (323)
Q Consensus 84 ~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~ 160 (323)
++||+++++..++.+|+.++++.+++++.+.........++...... ....+.++++|+++++++.+ .++++.+..+
T Consensus 77 ~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~s~~~~~~~~~~~~~~~ 156 (304)
T cd01172 77 KEGIDTDGIVDEGRPTTTKTRVIARNQQLLRVDREDDSPLSAEEEQRLIERIAERLPEADVVILSDYGKGVLTPRVIEAL 156 (304)
T ss_pred hCCCCcceEecCCCCceEEEEEecCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCCEEEEEcCCCCccCHHHHHHH
Confidence 99999999766667788887777655554433332222333222111 11234578999999987653 4567888999
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
++.+++.+.++++|++...+ ..++++|++++|++|++.+++....+.+++++.++.+. ...+++.+
T Consensus 157 ~~~a~~~~~~v~~D~~~~~~---------~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~-----~~~g~~~v 222 (304)
T cd01172 157 IAAARELGIPVLVDPKGRDY---------SKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLL-----ELLNLEAL 222 (304)
T ss_pred HHHHHhcCCCEEEeCCCcch---------hhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHHHHH-----HHhCCCeE
Confidence 99999999999999976542 46789999999999999998754333345666666662 23578999
Q ss_pred EEeeCCCceEEee-CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCC
Q 020650 241 VITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319 (323)
Q Consensus 241 vit~G~~G~~~~~-~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~ 319 (323)
++|+|++|+++++ +++.+++++++ ++++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|+..+.+
T Consensus 223 vvt~G~~G~~~~~~~~~~~~~~~~~---~~vvdttGAGDaf~ag~i~~l~~g~~~~~al~~a~a~Aa~~~~~~g~~~~~~ 299 (304)
T cd01172 223 LVTLGEEGMTLFERDGEVQHIPALA---KEVYDVTGAGDTVIATLALALAAGADLEEAAFLANAAAGVVVGKVGTAPVTP 299 (304)
T ss_pred EEEcCCCccEEEcCCCcEEEecCCC---CCCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHHHhheeeecCCCCCcCH
Confidence 9999999999998 66778887654 4799999999999999999999999999999999999999999999975543
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=299.87 Aligned_cols=283 Identities=26% Similarity=0.371 Sum_probs=226.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++...+. ......+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+.+.|++.
T Consensus 1 ~i~~iG~~~iD~~~~~~~-------~~~~~~~~~~~~GG~~~N~a~~la~-lg--~~~~~i~~vG~D~~g~~i~~~l~~~ 70 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGG-------RLEQADSFRKFFGGAEANVAVGLAR-LG--HRVALVTAVGDDPFGRFILAELRRE 70 (294)
T ss_pred CeEEechhheeeecCCCC-------ccchhhccccccCChHHHHHHHHHh-cC--CceEEEEecCCCHHHHHHHHHHHHc
Confidence 589999999999877653 2355566788999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe-CCccceeeccc--ccccCCcccCCCcchhhhhccccEEEEeccccccCH---HHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV-GGERSLVANLS--AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP---DSIQ 158 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~---~~~~ 158 (323)
||+++++. .++.+|+.+++.++ +|+|++..+.+ +...++.+++. ...+++++++|++++.+...+ +.+.
T Consensus 71 gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 146 (294)
T cd01166 71 GVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLD----EAALAGADHLHLSGITLALSESAREALL 146 (294)
T ss_pred CCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCC----HHHHhCCCEEEEcCcchhhCHHHHHHHH
Confidence 99999984 57778999988876 47787665532 33344444443 356789999999987654433 6788
Q ss_pred HHHHHHHhCCCeEEEeCCchh--H-HHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 159 LVAEHAAANNKVFMMNLSAPF--I-CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~--~-~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
.+++.+++.+.++++|+.... | .....+.++.+++++|++++|++|++.+++... .+++.+.++.+ ..
T Consensus 147 ~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~--~~~~~~~~~~l-------~~ 217 (294)
T cd01166 147 EALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDED--PTDAAERALAL-------AL 217 (294)
T ss_pred HHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCC--chhHHHHHHhh-------cC
Confidence 899999999999999996422 1 112345567889999999999999999976421 12333333332 25
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
+++.+++|+|++|++++++++.+++++++. +++||+||||+|+|+|+++|++|+++++|+++|+++|+.+|++.|+
T Consensus 218 g~~~viit~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 218 GVKAVVVKLGAEGALVYTGGGRVFVPAYPV---EVVDTTGAGDAFAAGFLAGLLEGWDLEEALRFANAAAALVVTRPGD 293 (294)
T ss_pred CccEEEEEEcCCceEEEECCceEEeCCCCc---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCC
Confidence 788999999999999998888888776543 7899999999999999999999999999999999999999999986
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=298.64 Aligned_cols=279 Identities=25% Similarity=0.313 Sum_probs=226.6
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ . .......+||.++|+|.++++ +| .++.++|.+|+|.+|+.+++.|+++
T Consensus 1 ~ilviG~~~~D~~~~~~~--~--------~~~~~~~~GG~~~n~a~~l~~-lg--~~v~~i~~vG~D~~g~~i~~~l~~~ 67 (295)
T cd01167 1 KVVCFGEALIDFIPEGSG--A--------PETFTKAPGGAPANVAVALAR-LG--GKAAFIGKVGDDEFGDFLLETLKEA 67 (295)
T ss_pred CEEEEcceeEEEecCCCC--C--------CccccccCCCcHHHHHHHHHh-cC--CCeEEEEeecCcHHHHHHHHHHHHc
Confidence 589999999999987665 1 445678899999999999997 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHHHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLVA 161 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~~~~ 161 (323)
||+++++. ..+.+|+.++++++ +|+|++....+....+..+.. ...+.++++++++++++... ...+.+.+++
T Consensus 68 gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 144 (295)
T cd01167 68 GVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTE---LNPDLLSEADILHFGSIALASEPSRSALLELL 144 (295)
T ss_pred CCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCcc---CChhHhccCCEEEEechhhccchHHHHHHHHH
Confidence 99999986 57778999998886 788887665554332222110 12355788999999876321 1135678899
Q ss_pred HHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc
Q 020650 162 EHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
+.+++.+.++.+|+... .|. ....+.++.+++++|++++|++|++.+++. ++..+.++.+ ...++
T Consensus 145 ~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~-----~~~~~~~~~l------~~~g~ 213 (295)
T cd01167 145 EAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGE-----EDPEEIAALL------LLFGL 213 (295)
T ss_pred HHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCC-----CCHHHHHHHH------hhcCC
Confidence 99999999999998632 231 123455778999999999999999998763 3455666777 56789
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC-------CHHHHHHHHhHHHHHHhh
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-------PIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~-------~~~~a~~~A~~~Aa~~~~ 310 (323)
+.+++|+|++|++++++++.+++|+++ .+++|||||||+|.|||+++|++|+ ++++|+++|+++|+++|+
T Consensus 214 ~~vvvt~G~~G~~~~~~~~~~~~~a~~---~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~ 290 (295)
T cd01167 214 KLVLVTRGADGALLYTKGGVGEVPGIP---VEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCT 290 (295)
T ss_pred CEEEEecCCcceEEEECCcceeeCCCC---cceeeCCCccHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHhhHHHhc
Confidence 999999999999999888888888654 4899999999999999999999999 999999999999999999
Q ss_pred hcCc
Q 020650 311 RSGC 314 (323)
Q Consensus 311 ~~G~ 314 (323)
+.|+
T Consensus 291 ~~G~ 294 (295)
T cd01167 291 KAGA 294 (295)
T ss_pred ccCC
Confidence 9986
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=297.72 Aligned_cols=276 Identities=22% Similarity=0.265 Sum_probs=224.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ +|..+......+....+||+++|+|.++++ +| .++.++|.+|+|.+|+.+++.|++.
T Consensus 1 ~v~~iG~~~~D~~~~v~~--~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~-lg--~~~~~~~~vG~D~~g~~i~~~l~~~ 75 (279)
T cd01942 1 DVAVVGHLNYDIILKVES--FPGPFESVLVKDLRREFGGSAGNTAVALAK-LG--LSPGLVAAVGEDFHGRLYLEELREE 75 (279)
T ss_pred CEEEEecceeeeEeeccc--CCCCCceEecceeeecCCcHHHHHHHHHHH-cC--CCceEEEEecCCcchHHHHHHHHHc
Confidence 589999999999999998 777777788888999999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 163 (323)
||+++++. ..+.+|+.++++.+ +++|.+....++...+++++ . ...+++++++|+++.. .+..+++.
T Consensus 76 gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~------~~~~~~~~ 144 (279)
T cd01942 76 GVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPND-E----ADPDGLADIVHLSSGP------GLIELARE 144 (279)
T ss_pred CCCccceEEcCCCCcceEEEEEcCCCCEEEEecCCcccccccCC-c----hhhhcccCEEEeCCch------HHHHHHHH
Confidence 99999984 56678998888776 56776665666555555544 1 2457899999998742 45677778
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++.+.++++|+..... ....+.++.+++++|++++|++|+..+....+. .+.. ...+.+.+++|
T Consensus 145 ~~~~g~~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~--~~~~------------~~~~~~~vvvt 209 (279)
T cd01942 145 LAAGGITVSFDPGQELP-RLSGEELEEILERADILFVNDYEAELLKERTGL--SEAE------------LASGVRVVVVT 209 (279)
T ss_pred HHHcCCeEEEcchhhhh-hccHHHHHHHHhhCCEEecCHHHHHHHHhhcCC--ChHH------------HhcCCCEEEEE
Confidence 88889999999975321 112345778899999999999999654332221 1111 11468899999
Q ss_pred eCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 244 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 244 ~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
+|++|++++++++.+++|++ ++.+++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|+
T Consensus 210 ~G~~G~~~~~~~~~~~~~~~--~~~~vvDttGAGDaf~a~~i~~l~~g~~l~~al~~a~~~Aa~~~~~~G~ 278 (279)
T cd01942 210 LGPKGAIVFEDGEEVEVPAV--PAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAASLKVERRGA 278 (279)
T ss_pred ECCCceEEEECCceEEccCc--CcCCCcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccCC
Confidence 99999999988888888764 2458999999999999999999999999999999999999999999986
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=305.14 Aligned_cols=296 Identities=17% Similarity=0.185 Sum_probs=223.3
Q ss_pred ccceEEEeCCceeeeEee--cChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 3 QEGILLGMGNPLLDISSV--VDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~--~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
++++|+++|++++|.+.. +++...+.+............+|| +.|+|.++++ +| .++.++|.+|+|..|+.+++
T Consensus 6 ~~~~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~l~~-lg--~~v~~i~~vG~D~~g~~i~~ 81 (315)
T TIGR02198 6 KGAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEREEDRLGG-AANVARNIAS-LG--ARVFLVGVVGDDEAGKRLEA 81 (315)
T ss_pred CCCcEEEECceeEeeeeeecccccCCCCCCceEEEEEEEecCcH-HHHHHHHHHh-cC--CceEEEEEEecchhHHHHHH
Confidence 367999999999999876 434111112223334455678898 7999999997 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEeCCccceee-cccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVA-NLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPD 155 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~ 155 (323)
.|++.||+++++. .++.+|+.++++.+.+ +.++. .......++...... +...+.++++|+++++++.. .++++
T Consensus 82 ~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~ 160 (315)
T TIGR02198 82 LLAEEGIDTSGLIRDKDRPTTTKTRVLARN-QQLLRVDFEERDPINAELEARLLAAIREQLASADAVVLSDYAKGVLTPR 160 (315)
T ss_pred HHHHCCCCcceEEECCCCCcceEEEEEcCC-eEEEEecCCCCCCCCHHHHHHHHHHHHhhhhhCCEEEEecCCCCccCHH
Confidence 9999999999874 5667888887776543 22222 111111122211111 11234578999999987653 45678
Q ss_pred HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 156 SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
.+..+++.+++.++++++|+.+..+ ..++.+|++++|++|++.+++. ..+.++.+++++.+. ...
T Consensus 161 ~~~~~~~~a~~~g~~v~~D~~~~~~---------~~~~~~d~l~~n~~E~~~l~~~-~~~~~~~~~~~~~l~-----~~~ 225 (315)
T TIGR02198 161 VVQEVIAAARKHGKPVLVDPKGKDF---------SRYRGATLITPNRKEAEAAVGA-CDTEAELVQAAEKLL-----EEL 225 (315)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcch---------hhcCCCcEECCCHHHHHHHhCC-CCCHHHHHHHHHHHH-----HHc
Confidence 8999999999999999999975421 3478999999999999999872 222344556666652 245
Q ss_pred CccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 236 RKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
|.+.++||+|++|++++++ +..+++++++ ++++||+||||+|.|||+++|++|+++++|+++|+++|+++|++.|+
T Consensus 226 g~~~vivT~G~~G~~~~~~~~~~~~~~~~~---~~vvdt~GAGDaf~ag~~~~l~~g~~~~~al~~A~~~aa~~~~~~G~ 302 (315)
T TIGR02198 226 DLEALLVTRSEKGMTLFTREGEPIHIPAQA---REVYDVTGAGDTVIATLALALAAGASLEEACRLANAAAGVVVGKLGT 302 (315)
T ss_pred CCCEEEEEcCCCCeEEEecCCCeEEecCCC---CCCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhccCCC
Confidence 7899999999999999874 5677777543 47999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 020650 315 TYPEKPE 321 (323)
Q Consensus 315 ~~p~~~~ 321 (323)
..|.+++
T Consensus 303 ~~~~~~~ 309 (315)
T TIGR02198 303 ATVSPAE 309 (315)
T ss_pred CCCCHHH
Confidence 8776654
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=308.36 Aligned_cols=289 Identities=15% Similarity=0.172 Sum_probs=222.0
Q ss_pred ceEEEeCCceeeeEeecC-hhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVD-DDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~-~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
..|+|+|++++|++..++ + +|.++. ........+||.+.|+|.++++ +| .++.++|.+|+|.+|+++++.|+
T Consensus 58 ~~v~viG~~~vD~~~~~~~~--~p~~~~--~~~~~~~~~GG~~~NvA~~lar-LG--~~v~~ig~VG~D~~G~~i~~~l~ 130 (362)
T PRK09954 58 EYCVVVGAINMDIRGMADIR--YPQAAS--HPGTIHCSAGGVGRNIAHNLAL-LG--RDVHLLSAIGDDFYGETLLEETR 130 (362)
T ss_pred ccEEEEEEEEEEEEEeeCCc--CcCCCC--CCceEEEecCcHHHHHHHHHHH-cC--CCeEEEEEECCCHHHHHHHHHHH
Confidence 478999999999999887 4 454443 4556788899999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEeCCccceeeccc--ccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLS--AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
+.||+++++. .++.+|+.++.+.+.++++++...+ ....++++.+.. ..+.+..++++++++ +.+++.+..+
T Consensus 131 ~~GVd~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~~~ 205 (362)
T PRK09954 131 RAGVNVSGCIRLHGQSTSTYLAIANRQDETVLAINDTHILQQLTPQLLNG--SRDLIRHAGVVLADC---NLTAEALEWV 205 (362)
T ss_pred HcCCCccceEEcCCCCCeEEEEEEcCCCCEEEEEcCchhhhcCCHHHHHH--HHHHHhcCCEEEEEC---CCCHHHHHHH
Confidence 9999999875 5677788887776655555544322 222344333321 234467889998875 3456666666
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
++.+ +++++++|+.+..+ .+.++.+++++|++++|++|++.+++....+.++.+++++.+ .+.|++.+
T Consensus 206 ~~~a--~~~~v~~D~~~~~~----~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l------~~~g~~~V 273 (362)
T PRK09954 206 FTLA--DEIPVFVDTVSEFK----AGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAVNAL------HQQGVQQI 273 (362)
T ss_pred HHhC--CCCcEEEECCCHHH----hhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHH------HHcCCCEE
Confidence 6654 46889999875431 233667899999999999999999874332233456777777 66789999
Q ss_pred EEeeCCCceEEeeCC-eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCC
Q 020650 241 VITQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319 (323)
Q Consensus 241 vit~G~~G~~~~~~~-~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~ 319 (323)
|||+|++|+++++.+ ..++++++ +++++|||||||+|.|||+++|++|+++++|+++|+++|++++.....+.|..
T Consensus 274 vvt~G~~G~~~~~~~~~~~~~~~~---~v~vvDttGAGDaF~Ag~l~~l~~g~~~~eal~~a~a~Aal~~~s~~~~~~~~ 350 (362)
T PRK09954 274 FVYLPDESVFCSEKDGEQFLLTAP---AHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAAISRASGSLNNPTL 350 (362)
T ss_pred EEEeCCccEEEEeCCCceEeccCC---CcccccccchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCcCCCcC
Confidence 999999999988754 35555544 34899999999999999999999999999999999999999987776665654
Q ss_pred C
Q 020650 320 P 320 (323)
Q Consensus 320 ~ 320 (323)
.
T Consensus 351 ~ 351 (362)
T PRK09954 351 S 351 (362)
T ss_pred C
Confidence 3
|
|
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=293.86 Aligned_cols=263 Identities=18% Similarity=0.286 Sum_probs=214.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ +|.++...+..+....+||++.|+|.+|++ +| .++.++|.+|+|..|+.+++.|++
T Consensus 1 ~il~iG~~~iD~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~-lG--~~~~~i~~vG~D~~g~~i~~~l~~- 74 (265)
T cd01947 1 KIAVVGHVEWDIFLSLDA--PPQPGGISHSSDSRESPGGGGANVAVQLAK-LG--NDVRFFSNLGRDEIGIQSLEELES- 74 (265)
T ss_pred CEEEEeeeeEEEEEEecC--CCCCCceeecccceeecCchHHHHHHHHHH-cC--CceEEEEEecCChHHHHHHHHHHh-
Confidence 589999999999999988 777888888889999999999999999998 56 999999999999999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 164 (323)
++++..+...+..|+.++++++ +|+|+++...+.. ++++. +..++++|++|+++.. ...++++.+
T Consensus 75 ~~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~a 140 (265)
T cd01947 75 GGDKHTVAWRDKPTRKTLSFIDPNGERTITVPGERL----EDDLK----WPILDEGDGVFITAAA------VDKEAIRKC 140 (265)
T ss_pred cCCcceEEecCCCCceEEEEECCCCcceEEecCCCC----cccCC----HhHhccCCEEEEeccc------ccHHHHHHH
Confidence 9999988665668999988886 6888775443221 12222 2457889999998753 124566677
Q ss_pred HhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEee
Q 020650 165 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 244 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~ 244 (323)
++.+ .+++|+.... ..+.++++++++|++++|++|+..++. ++.+ .+.+.+.+++|+
T Consensus 141 ~~~~-~~~~d~~~~~----~~~~~~~~~~~~d~~~~n~~e~~~l~~------------~~~~------~~~~~~~viit~ 197 (265)
T cd01947 141 RETK-LVILQVTPRV----RVDELNQALIPLDILIGSRLDPGELVV------------AEKI------AGPFPRYLIVTE 197 (265)
T ss_pred HHhC-CeEeccCccc----cchhHHHHhhhCCEEEeCHHHHHHhhh------------HHHH------HhccCCEEEEEe
Confidence 7665 3456665332 223467889999999999999988642 2344 456789999999
Q ss_pred CCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 245 GADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 245 G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
|++|++++++++.+++++++ ++++|||||||+|.|||++++++|+++++|+++|+++|++++++.|+
T Consensus 198 G~~Ga~~~~~~~~~~~~~~~---~~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~~~Aa~~v~~~G~ 264 (265)
T cd01947 198 GELGAILYPGGRYNHVPAKK---AKVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGAICVSHFGP 264 (265)
T ss_pred CCCCeEEEECCeeEECCCCC---CCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCC
Confidence 99999999888877777653 48999999999999999999999999999999999999999999985
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=301.49 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=230.6
Q ss_pred EeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCce
Q 020650 9 GMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVN 88 (323)
Q Consensus 9 viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~ 88 (323)
|.=++++|++..+++ +| +++.....+...++||.+.|+|.+|++ +| .++.++|.+|+| .|+.+++.|++.||+
T Consensus 4 ~~~~~~~D~~~~~~~--~~-~g~~~~~~~~~~~~GG~~~NvA~~la~-lG--~~v~~is~vG~D-~g~~~~~~L~~~gId 76 (304)
T TIGR03828 4 VTLNPAIDLTIELDG--LT-LGEVNRVESTRIDAGGKGINVSRVLKN-LG--VDVVALGFLGGF-TGDFIEALLREEGIK 76 (304)
T ss_pred EEcchHHeEEEEccc--cc-cCceeecccccccCCccHHHHHHHHHH-cC--CCeEEEEEecCc-hhHHHHHHHHHCCCc
Confidence 556789999999999 77 888999999999999999999999998 56 999999999999 699999999999999
Q ss_pred eEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHHHHHH
Q 020650 89 VHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEHA 164 (323)
Q Consensus 89 ~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~ 164 (323)
++++... ..|+.++++.+ +|+++.+...+. .++.+++.. ....+.+++++++|++++.+ ..+++.+..+++.+
T Consensus 77 ~~~~~~~-~~t~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~ 153 (304)
T TIGR03828 77 TDFVRVP-GETRINVKIKEPSGTETKLNGPGP--EISEEELEALLEKLRAQLAEGDWLVLSGSLPPGVPPDFYAELIALA 153 (304)
T ss_pred ceEEECC-CCCeeeEEEEeCCCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCCHHHHHHHHHHH
Confidence 9998654 35777776665 676665544332 233333221 01123578999999998754 35667889999999
Q ss_pred HhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEee
Q 020650 165 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 244 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~ 244 (323)
++.+.++++|+.... . .+.+....|++++|++|++.+++....+.+++.++++.+ ...+.+.+|+|+
T Consensus 154 ~~~~~~v~~D~~~~~----~---~~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vvvT~ 220 (304)
T TIGR03828 154 REKGAKVILDTSGEA----L---RDGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAAREL------LDLGAENVLISL 220 (304)
T ss_pred HHcCCEEEEECChHH----H---HHHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEcc
Confidence 999999999997532 1 122334578999999999999875433334566777777 566889999999
Q ss_pred CCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCCCC
Q 020650 245 GADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 322 (323)
Q Consensus 245 G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~~~ 322 (323)
|++|++++++++.++++++ +.+++|||||||+|.|+|+++|++|+++++|+++|+++|+++|++.|+.+|+++++
T Consensus 221 G~~G~~~~~~~~~~~~~~~---~~~vvDttGAGDaF~a~~l~~l~~g~~~~~a~~~a~~~Aa~~~~~~G~~~p~~~~~ 295 (304)
T TIGR03828 221 GADGALLVTKEGALFAQPP---KGEVVSTVGAGDSMVAGFLAGLESGLSLEEALRLAVAAGSAAAFSEGTGLPDPEDI 295 (304)
T ss_pred CCCCcEEEcCCceEEEeCC---CccccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCCCCCHHHH
Confidence 9999999988777777754 34789999999999999999999999999999999999999999999988877653
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=291.94 Aligned_cols=261 Identities=19% Similarity=0.299 Sum_probs=212.0
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+++|++++|.+... ...++||++.|+|.+|++ +| .++.++|.+|+|..|+.+++.|++.
T Consensus 1 ~v~~iG~~~~D~~~~~----------------~~~~~GG~~~Nva~~la~-lG--~~~~~~~~vG~D~~g~~i~~~l~~~ 61 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------------GKMYPGGNALNVAVYAKR-LG--HESAYIGAVGNDDAGAHVRSTLKRL 61 (264)
T ss_pred CeEEEcceEEEEeccC----------------ceecCCCcHHHHHHHHHH-cC--CCeeEEecccCchhHHHHHHHHHHc
Confidence 5899999999998642 457899999999999998 56 9999999999999999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecc-cccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 164 (323)
||+++++...+.+|+.+++..++|+|++..+. +......+.+ .....+++++++|++++.+ .+.+.++++.+
T Consensus 62 gI~~~~v~~~~~~t~~~~~~~~~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~a 134 (264)
T cd01940 62 GVDISHCRVKEGENAVADVELVDGDRIFGLSNKGGVAREHPFE----ADLEYLSQFDLVHTGIYSH---EGHLEKALQAL 134 (264)
T ss_pred CCChhheEEcCCCCceEEEEecCCceEEEeecCCcHHhcccCc----ccHhHHhcCCEEEEccccc---HHHHHHHHHHH
Confidence 99999987544578887765557788765442 3222222221 1235578999999997542 56788999999
Q ss_pred HhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEee
Q 020650 165 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 244 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~ 244 (323)
++.++++++|++... ..+.++.+++++|++++|++|.. .++.+++++.+ ...+++.+++|+
T Consensus 135 ~~~g~~v~~D~~~~~----~~~~~~~~~~~~d~~~~~~~~~~---------~~~~~~~~~~l------~~~~~~~vvvT~ 195 (264)
T cd01940 135 VGAGALISFDFSDRW----DDDYLQLVCPYVDFAFFSASDLS---------DEEVKAKLKEA------VSRGAKLVIVTR 195 (264)
T ss_pred HHcCCEEEEcCcccC----CHHHHHhhcccCCEEEechhhcC---------cchHHHHHHHH------HHcCCCEEEEEE
Confidence 999999999997643 22336678999999999987742 23566677777 566889999999
Q ss_pred CCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCC-HHHHHHHHhHHHHHHhhhcCc
Q 020650 245 GADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-IEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 245 G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~-~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
|++|++++++++.++++++ +.+++|||||||+|.|||+++|++|++ +++|+++|+++|++++++.|+
T Consensus 196 G~~G~~~~~~~~~~~~~~~---~~~~vDttGAGDaf~ag~i~~l~~g~~~~~~al~~a~~~aa~~~~~~G~ 263 (264)
T cd01940 196 GEDGAIAYDGAVFYSVAPR---PVEVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFAAKTCGHEGA 263 (264)
T ss_pred CCCCeEEEeCCeEEecCCc---CCCCCCCCCchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccCC
Confidence 9999999988877777754 448999999999999999999999999 999999999999999999986
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=296.70 Aligned_cols=278 Identities=18% Similarity=0.222 Sum_probs=218.4
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
.|+|+|++++|++..+++ +|.++..........++||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|+++
T Consensus 1 ~v~~iG~~~vD~~~~v~~--~p~~~~~~~~~~~~~~~GG~a~NvA~~la~-lG--~~~~~~~~vG~D~~g~~~~~~l~~~ 75 (290)
T cd01939 1 AVLCVGLTVLDFITTVDK--YPFEDSDQRTTNGRWQRGGNASNSCTVLRL-LG--LSCEFLGVLSRGPVFESLLDDFQSR 75 (290)
T ss_pred CEEEEeeeeeEEEeeecC--CCCCCcceEeeeeeEecCCCHHHHHHHHHH-cC--CceEEEEeecCCHHHHHHHHHHHHc
Confidence 489999999999999998 777777777777889999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 163 (323)
||+++++. .++..+..++++.+ +|+|.++...++...++.+++.. ..++++|++|++++. ++....+++.
T Consensus 76 gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~----~~~~~~~~~~ 147 (290)
T cd01939 76 GIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDNNLPEVTYDDFSK----IDLTQYGWIHFEGRN----PDETLRMMQH 147 (290)
T ss_pred CCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCCCCCCCCHHHHhh----hhhccCCEEEEeccC----HHHHHHHHHH
Confidence 99999974 44444554555554 67887776666655566555543 235789999999854 3445567777
Q ss_pred HHhCC-------CeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC
Q 020650 164 AAANN-------KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236 (323)
Q Consensus 164 ~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (323)
+++.+ +++++|+.... +.+..+++++|++++|++|++.+ + ..+.++.+..+.. ...+
T Consensus 148 ~~~~~~~~~~~~~~v~~d~~~~~------~~~~~~l~~~di~~~n~~~~~~~-~-----~~~~~~~~~~~~~----~~~~ 211 (290)
T cd01939 148 IEEHNNRRPEIRITISVEVEKPR------EELLELAAYCDVVFVSKDWAQSR-G-----YKSPEECLRGEGP----RAKK 211 (290)
T ss_pred HHHhcCcCCCcceEEEEEeccCc------hhhhhHHhhCCEEEEEhHHHHhc-C-----cCCHHHHHHhhhh----hccC
Confidence 77655 57778875321 23558899999999999988764 3 1344454443311 3457
Q ss_pred ccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCC-HHHHHHHHhHHHHHHhhhcCc
Q 020650 237 KRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-IEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 237 ~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~-~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
.+.+++|+|++|++++++ ++.+++|+++ ..+++||+||||+|.|||+|+|++|++ +++|+++|+++|++++++.|.
T Consensus 212 ~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vvDt~GAGDsf~agfl~~l~~g~~~~~~a~~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 212 AALLVCTWGDQGAGALGPDGEYVHSPAHK--PIRVVDTLGAGDTFNAAVIYALNKGPDDLSEALDFGNRVASQKCTGVGF 289 (290)
T ss_pred CcEEEEEcccCCeEEEcCCCCEEEecCCC--CCCcccCCCchHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHhhhcC
Confidence 889999999999999875 4566777543 236899999999999999999999995 999999999999999999885
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-41 Score=305.30 Aligned_cols=304 Identities=17% Similarity=0.181 Sum_probs=225.3
Q ss_pred cceEEEeCCceeeeEeecChhHH-------hh-HHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchh
Q 020650 4 EGILLGMGNPLLDISSVVDDDFL-------NK-YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFG 75 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~-------~~-~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g 75 (323)
++.|+|+|++.+|.+........ .. .............+||.+.|+|.++++ +| .++.++|.||+|.+|
T Consensus 125 ~~~v~~~Ge~liDf~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~GGa~aNVAvaLAR-LG--~~vafIG~VGdD~fG 201 (496)
T PLN02543 125 PPLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVR-LG--GRAAFMGKVGDDDFG 201 (496)
T ss_pred CCeEEEeChhhhhhcCCCcccccccccccccccccccccCCeeEeccCcHHHHHHHHHHH-CC--CCEEEEEEeCCCHHH
Confidence 46799999999999875322000 00 001113455778999999999999998 56 999999999999999
Q ss_pred HHHHHHHHHcCceeEEee-cCCCCceeEEEEEe--CCcccee--ecccccccCCcccCCCcchhhhhccccEEEEecccc
Q 020650 76 EEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV--GGERSLV--ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFL 150 (323)
Q Consensus 76 ~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~--~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~ 150 (323)
+++++.|+++||+++++. .++.+|+.+++.++ ++.+.++ ...+++..+.++++.. ..+.+++++|++++.+
T Consensus 202 ~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~gr~~~~~~~~gA~~~L~~~di~~----~~l~~a~ilh~~~~~l 277 (496)
T PLN02543 202 EELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAETVKEAAEDSLLASELNL----AVLKEARMFHFNSEVL 277 (496)
T ss_pred HHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCCCEEEEecCCCHHHhCChhhcCH----hHhCCCceEEECChhh
Confidence 999999999999999986 56778999988873 3335443 2334555677776653 5678999999998764
Q ss_pred ccC--HHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC------C---
Q 020650 151 TVS--PDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW------E--- 215 (323)
Q Consensus 151 ~~~--~~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~------~--- 215 (323)
.-+ .+....+++.+++.|+.+++|+. .+.|. ....+.+..+++++|++++|++|++.+++.... +
T Consensus 278 ~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~~~~~~~~~~~ 357 (496)
T PLN02543 278 TSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYYERKRNYPPQY 357 (496)
T ss_pred cCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcccccccccchh
Confidence 222 36788899999999999888875 45563 334566788999999999999999999864210 0
Q ss_pred ---------------CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEece---eCCCCcccCCCCcc
Q 020650 216 ---------------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVI---VLPKDKLVDTNGAG 277 (323)
Q Consensus 216 ---------------~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~---~~~~~~~~d~tGAG 277 (323)
..+.+++ ..+ ...+.+.+|||+|++|+++++++....++.. .++ ..++||||||
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~-~~l------~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~-~~~VDTTGAG 429 (496)
T PLN02543 358 YAESFEQTKNWRDYYHYTPEEI-APL------WHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLIT-PFTCDRTGSG 429 (496)
T ss_pred hhhhhhhhhcccccccCCHHHH-HHH------HHCCCCEEEEEcCCCcEEEEECCCcccccccccccCC-CCCcCCCchH
Confidence 0123343 344 4457899999999999999975422121111 111 1258999999
Q ss_pred hHHHHHHHHHhhc-------CCCHHHHHHHHhHHHHHHhhhcCc--cCCCCCCC
Q 020650 278 DAFVGGFLSQLVQ-------EKPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 322 (323)
Q Consensus 278 Daf~ag~~~~l~~-------g~~~~~a~~~A~~~Aa~~~~~~G~--~~p~~~~~ 322 (323)
|+|.|||+++|++ ++++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 430 DAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev 483 (496)
T PLN02543 430 DAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESAT 483 (496)
T ss_pred HHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9999999999985 779999999999999999999998 46766553
|
|
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=296.93 Aligned_cols=288 Identities=19% Similarity=0.162 Sum_probs=222.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcE--EEEeeeecCchhHHHHHHHH
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT--SYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v--~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++++|++.+|.+...+. ......+||++.|+|++++++.|.+.++ .+++.+|+| +|+.+++.|+
T Consensus 1 ~~~~~G~~~~d~i~~~~~------------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~~~~vG~D-~G~~l~~~L~ 67 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------------EPVTNVLGGAGTYAILGARLFLPPPLSRSISWIVDKGSD-FPKSVEDELE 67 (328)
T ss_pred CccccCcEEeeccccCCC------------CccccccCCchhhHhhceeeecCCccccceeeEEecCCC-CCHHHHHHHH
Confidence 478999999999988663 3466789999999999998622422366 889999999 8999999999
Q ss_pred HcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 84 LAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 84 ~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+.||++++...++.+|+.+++.++ +++|.++.+.+.+..+++++++. ..+..++++|+++.... ..+...++++
T Consensus 68 ~~GVd~~~~~~~~~~Tg~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~----~~~~~a~~~hl~~~~~~-~~~~~~~~~~ 142 (328)
T cd01943 68 SWGTGMVFRRDPGRLTTRGLNIYDGNDRRFFKYLTPKKRIDVSDDLNS----TPLIRSSCIHLICSPER-CASIVDDIIN 142 (328)
T ss_pred hcCCceEEEeCCCCcchhhhhhcCCCCcceeeecCccccccccccccc----ccccCCCeEEEECCHHH-HHHHHHHHHH
Confidence 999999994456778998887775 67777777666666777777764 34678999999875321 1267788888
Q ss_pred HHHh------CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHH-----HHHhcCCc
Q 020650 163 HAAA------NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA-----LKLSQWPK 231 (323)
Q Consensus 163 ~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~-----~~l~~~~~ 231 (323)
.+++ .+..+++|+.+..+.....+.+..+++++|++++|++|++.+++....+....++.. ..+..+
T Consensus 143 ~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~-- 220 (328)
T cd01943 143 LFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGI-- 220 (328)
T ss_pred HHHhhccccCCccEEEEecCCcccChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccchhhhhhhHHHHHHHhh--
Confidence 8888 778888998754222112345789999999999999999999875433222222111 111111
Q ss_pred cccCCccEEEEeeCCCceEEee--CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 232 ASEIRKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 232 ~~~~~~~~vvit~G~~G~~~~~--~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
...+.+.+|||+|++|+++++ +++.+++|++++++.+++|||||||+|.|||+++|++|+++++|+++|+++|++++
T Consensus 221 -~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~~~~al~~a~a~Aa~~v 299 (328)
T cd01943 221 -LQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALTKSIDEACIYGSVAASFAI 299 (328)
T ss_pred -hccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 345788999999999999987 45677777765544589999999999999999999999999999999999999999
Q ss_pred hhcCc
Q 020650 310 QRSGC 314 (323)
Q Consensus 310 ~~~G~ 314 (323)
++.|.
T Consensus 300 ~~~G~ 304 (328)
T cd01943 300 EQVGL 304 (328)
T ss_pred ccCCC
Confidence 99996
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=294.21 Aligned_cols=294 Identities=17% Similarity=0.156 Sum_probs=232.3
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
||++ -.+|.-++++|++..+++ +| ++...++.....++||++.|+|..+++ +| .++.++|.+|+|..|+. .+
T Consensus 1 ~~~~-~~~~~~~p~~D~~~~~~~--~~-~~~~~~~~~~~~~~GG~~~Nva~~la~-lG--~~~~~i~~vG~D~~~~~-~~ 72 (312)
T PRK09513 1 MSRR-VATITLNPAYDLVGFCPE--IE-RGEVNLVKTTGLHAAGKGINVAKVLKD-LG--IDVTVGGFLGKDNQDGF-QQ 72 (312)
T ss_pred CCce-EEEEecChHHeEEEEcCc--ee-cCCeeeecceeecCCchHHHHHHHHHH-cC--CCeEEEEEecCccHHHH-HH
Confidence 6664 555889999999999999 66 588899999999999999999999998 56 99999999999999986 68
Q ss_pred HHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccccEEEEeccccc-cCHHH
Q 020650 81 NSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFLT-VSPDS 156 (323)
Q Consensus 81 ~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~~-~~~~~ 156 (323)
.|+++||++.++..++ +|+.++++++ +++++.+...+. .+++.+... ......++++|++|++|+.+. ...+.
T Consensus 73 ~l~~~gv~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~d~v~~~g~~~~~~~~~~ 149 (312)
T PRK09513 73 LFSELGIANRFQVVQG-RTRINVKLTEKDGEVTDFNFSGF--EVTPADWERFVTDSLSWLGQFDMVAVSGSLPRGVSPEA 149 (312)
T ss_pred HHHHcCCCccEEECCC-CCEEEEEEEeCCCcEEEEeCCCC--CCCHHHHHHHHHHHHhhcCCCCEEEEECCCCCCCCHHH
Confidence 9999999988776544 6888777775 677765544331 233332221 011345789999999987542 34578
Q ss_pred HHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC
Q 020650 157 IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (323)
+..+++.+++.+.++++|++... . .+.+....+++++|++|+..+++....+.+++.++++.+ ...+
T Consensus 150 ~~~~~~~a~~~g~~v~~D~~~~~----~---~~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g 216 (312)
T PRK09513 150 FTDWMTRLRSQCPCIIFDSSREA----L---VAGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHAL------REQG 216 (312)
T ss_pred HHHHHHHHHhcCCEEEEECChHH----H---HHHhccCCeEEcCCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcC
Confidence 88999999999999999997532 1 223455778999999999999875443334555677777 5678
Q ss_pred ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC
Q 020650 237 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY 316 (323)
Q Consensus 237 ~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~ 316 (323)
++.+++|+|++|++++++++.++.+++ +++++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|...
T Consensus 217 ~~~vvvt~G~~G~~~~~~~~~~~~~~~---~~~~vDttGAGDaf~ag~i~~l~~g~~~~~a~~~A~a~Aa~~~~~~~~~~ 293 (312)
T PRK09513 217 IAHVVISLGAEGALWVNASGEWIAKPP---ACDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVSALAVSQSNVGI 293 (312)
T ss_pred CCEEEEEeCCCCcEEEeCCceEEecCC---CccccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhCCCCCC
Confidence 999999999999999887766666653 34799999999999999999999999999999999999999999998877
Q ss_pred CCCCC
Q 020650 317 PEKPE 321 (323)
Q Consensus 317 p~~~~ 321 (323)
|+.+|
T Consensus 294 ~~~~e 298 (312)
T PRK09513 294 TDRPQ 298 (312)
T ss_pred CCHHH
Confidence 77654
|
|
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=290.05 Aligned_cols=283 Identities=19% Similarity=0.260 Sum_probs=220.1
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
.|+++|++++|++..+++ .|.++..... .....+||+++|+|..+++ +| .++.++|.+|+|..|+.+++.|++.
T Consensus 1 ~v~~~G~~~~D~~~~~~~--~~~~~~~~~~-~~~~~~GG~~~Nva~~l~~-lG--~~~~~~~~lG~D~~g~~i~~~L~~~ 74 (288)
T cd01941 1 EIVVIGAANIDLRGKVSG--SLVPGTSNPG-HVKQSPGGVGRNIAENLAR-LG--VSVALLSAVGDDSEGESILEESEKA 74 (288)
T ss_pred CeEEEEeEEEeeeecccC--ccccCCCCCe-eEEEccCcHHHHHHHHHHH-hC--CCcEEEEEEecCccHHHHHHHHHHc
Confidence 389999999999999888 5555554443 4678999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEe-CCccceee-cccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVV-GGERSLVA-NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 163 (323)
||+++++...+.+|+.++.+++ +++|.+.. .......++++.++ .....+..++++++++ ..+++.+..+++.
T Consensus 75 gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~~~---~~~~~~~~~~~~~ 149 (288)
T cd01941 75 GLNVRGIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLR--KIREALKEAKPIVVDA---NLPEEALEYLLAL 149 (288)
T ss_pred CCccceeeeCCCCcceEEEEECCCCCEEEEEechHhhhhCCHHHHH--HHHHHHhcCCEEEEeC---CCCHHHHHHHHHh
Confidence 9999998766778999888876 67776522 22222223322221 1234578999999875 3456778889999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++.+.++++|+..... ..+ +..+++++|++++|++|++.+++....+.+...++++.+ ...+++.+++|
T Consensus 150 a~~~~~~v~~d~~~~~~---~~~-~~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~vvit 219 (288)
T cd01941 150 AAKHGVPVAFEPTSAPK---LKK-LFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKIL------LLPGIKNVIVT 219 (288)
T ss_pred hhhcCCcEEEEccchHH---hcc-chhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHHH------HHcCCcEEEEE
Confidence 99999999999864321 111 125889999999999999999875433323344555666 56688999999
Q ss_pred eCCCceEEeeC---CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 244 QGADPVVVAQD---GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 244 ~G~~G~~~~~~---~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
+|++|++++++ +..+++|++ .+.+++||+||||+|.|+|+++|++|+++++|+++|+++|+++|+.
T Consensus 220 ~G~~Ga~~~~~~~~~~~~~~~~~--~~~~~vDttGAGDaf~a~~~~~l~~g~~~~~al~~a~~~Aa~~~~~ 288 (288)
T cd01941 220 LGAKGVLLSSREGGVETKLFPAP--QPETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAAAALTLES 288 (288)
T ss_pred eCCCcEEEEecCCCceeEEecCC--CCccceeCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 99999999986 456777752 2447999999999999999999999999999999999999999863
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=292.55 Aligned_cols=291 Identities=19% Similarity=0.186 Sum_probs=229.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-+.|.=++.+|++..+++ ++ ++...+.......+||++.|+|.+|++ +| .++.+++.+|+ .+|+.+++.|++.
T Consensus 4 i~~~~~~p~~d~~~~~~~--~~-~~~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~~~~i~~vG~-~~g~~i~~~l~~~ 76 (309)
T PRK10294 4 IYTLTLAPSLDSATITPQ--IY-PEGKLRCSAPVFEPGGGGINVARAIAH-LG--GSATAIFPAGG-ATGEHLVSLLADE 76 (309)
T ss_pred EEEEecChHHeEEEEeCc--ee-eCCeEEeccceecCCccHHHHHHHHHH-cC--CCeEEEEEecC-ccHHHHHHHHHHc
Confidence 577779999999999998 64 678899999999999999999999998 56 99999999996 7999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC-cchhhhhccccEEEEecccc-ccCHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK-PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAE 162 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~ 162 (323)
||+++++...+..++...+..+ +|++.++...+. .++.++++. ......+++.++++++++.+ ..+.+.+..+++
T Consensus 77 gv~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 154 (309)
T PRK10294 77 NVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLIS 154 (309)
T ss_pred CCCceEEECCCCCeeeEEEEEcCCCcEEEEECCCC--CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCHHHHHHHHH
Confidence 9999998654443443444444 567665554443 244433322 01123467899999998764 334578899999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC-ccEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR-KRTAV 241 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~vv 241 (323)
.+++.|.++++|+.... ..+. ..++++|++++|++|+..+++....+.++++++++.+ ...+ .+.++
T Consensus 155 ~a~~~g~~v~~D~~~~~----~~~~--~~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~~l------~~~~~~~~vv 222 (309)
T PRK10294 155 AAQKQGIRCIIDSSGDA----LSAA--LAIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQEL------VNSGKAKRVV 222 (309)
T ss_pred HHHHcCCeEEEeCCCHH----HHHH--HhcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCCEEE
Confidence 99999999999997543 1111 1256899999999999999876544444566777777 4455 78999
Q ss_pred EeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCC
Q 020650 242 ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 320 (323)
Q Consensus 242 it~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~ 320 (323)
+|+|++|++++++++.+++++++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.|+.+++.+
T Consensus 223 vT~G~~G~~~~~~~~~~~~~~~~---v~vvDttGAGDaf~ag~l~~l~~g~~~~~al~~a~a~aa~~v~~~G~~~~~~~ 298 (309)
T PRK10294 223 VSLGPQGALGVDSENCIQVVPPP---VKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHD 298 (309)
T ss_pred EecCCCceEEEcCCccEEEeCCC---cccCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence 99999999999877777777543 47899999999999999999999999999999999999999999999866644
|
|
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=282.91 Aligned_cols=258 Identities=17% Similarity=0.242 Sum_probs=206.0
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+++|++++|+....+ ..++||.+.|+|..|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------------~~~~GG~~~NvA~~l~~-lG--~~~~~is~vG~D~~g~~i~~~l~~ 61 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------------KAFSGGNAVNVAVYCTR-YG--IQPGCITWVGDDDYGTKLKQDLAR 61 (260)
T ss_pred CeEEEeccceeeecccCC----------------ccccCccHHHHHHHHHH-cC--CcceEEEEecCcHHHHHHHHHHHH
Confidence 479999999999986542 25899999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecc-cccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 163 (323)
+||+++++...+.+|+.+++.+++++|++..+. +....+..++. ..+.+.++++++++.+. ...++++.
T Consensus 62 ~gI~~~~~~~~~~~t~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~----~~~~l~~~~~v~~~~~~------~~~~~~~~ 131 (260)
T PRK09813 62 MGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADFALSEE----DYAWLAQYDIVHAAIWG------HAEDAFPQ 131 (260)
T ss_pred cCCcchheeeecCCCceEEEEEeCCcEEeeccCCCcccccccCHH----HHHHHHhCCEEEEeccc------hHHHHHHH
Confidence 999999986544568887777767787765443 32222222211 23457889999996421 13567777
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++++.++++|+.... ..+.+..+++++|+++.|+++. ..+++++++.+ .+.+.+.++||
T Consensus 132 ~~~~~~~v~~D~~~~~----~~~~~~~~~~~~d~~~~~~~~~----------~~~~~~~~~~~------~~~g~~~viit 191 (260)
T PRK09813 132 LHAAGKLTAFDFSDKW----DSPLWQTLVPHLDYAFASAPQE----------DEFLRLKMKAI------VARGAGVVIVT 191 (260)
T ss_pred HHHcCCeEEEEcCCCc----cHHHHHHhCCceeEEEecCCcc----------hHHHHHHHHHH------HHcCCCEEEEE
Confidence 8889999999997542 2233567899999999886531 12456677777 56688999999
Q ss_pred eCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 244 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 244 ~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
+|++|++++++++.+++|+++. +++|||||||+|.|||++++++|+++++|+++|+++|++++++.|+
T Consensus 192 ~G~~Ga~~~~~~~~~~~~~~~~---~~vDttGAGDaF~ag~i~~~~~g~~~~~al~~a~~~aa~~~~~~G~ 259 (260)
T PRK09813 192 LGENGSIAWDGAQFWRQAPEPV---TVVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACAAKTIQYHGA 259 (260)
T ss_pred ECCCceEEEECCEEEecCCccc---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCC
Confidence 9999999998888888887654 7899999999999999999999999999999999999999999986
|
|
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=287.65 Aligned_cols=282 Identities=22% Similarity=0.221 Sum_probs=224.9
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
...++|+.++|++..+++ +|. +...+.......+||.++|+|.+|++ +| .++.++|.+|+| +|+.+++.|++.
T Consensus 2 ~~~~~~~~~~D~~~~~~~--~~~-~~~~~~~~~~~~~GG~~~Nva~~la~-lG--~~v~~is~vG~D-~g~~i~~~l~~~ 74 (289)
T cd01164 2 IYTVTLNPAIDLTIELDQ--LQP-GEVNRVSSTRKDAGGKGINVARVLKD-LG--VEVTALGFLGGF-TGDFFEALLKEE 74 (289)
T ss_pred EEEEecChHHeEEEEcCc--ccC-CceeecccccccCCcchhHHHHHHHH-cC--CCeEEEEEccCc-hhHHHHHHHHHc
Confidence 467899999999999999 554 68888888999999999999999998 56 999999999998 799999999999
Q ss_pred CceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccccEEEEeccccc-cCHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFLT-VSPDSIQLVA 161 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~~-~~~~~~~~~~ 161 (323)
||+++++... .+|+..+++.+ ++++..+...+ ..++++++.. +...+.+++++++|+++..+. .+.+....++
T Consensus 75 gi~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 151 (289)
T cd01164 75 GIPDDFVEVA-GETRINVKIKEEDGTETEINEPG--PEISEEELEALLEKLKALLKKGDIVVLSGSLPPGVPADFYAELV 151 (289)
T ss_pred CCCceEEECC-CCCEEEEEEEeCCCCEEEEeCCC--CCCCHHHHHHHHHHHHHhcCCCCEEEEeCCCCCCcCHHHHHHHH
Confidence 9999998653 35677776665 35554443322 2233333321 011234678999999986542 3457888999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
+.+++.+.++.+|+.... +.+++ +.+|++++|++|++.+++....+.+++.++++.+ ...+++.+
T Consensus 152 ~~~~~~~~~i~~D~~~~~--------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l------~~~g~~~v 217 (289)
T cd01164 152 RLAREKGARVILDTSGEA--------LLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKL------IERGAENV 217 (289)
T ss_pred HHHHHcCCeEEEECChHH--------HHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEE
Confidence 999999999999996432 22233 7999999999999999876544445677777777 56678899
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
++|+|++|++++.+++.++++++ +.+++||+||||+|.|||+++|.+|+++++|+++|+++|+++|++.|+
T Consensus 218 ivt~G~~G~~~~~~~~~~~~~~~---~~~vvDttGAGDaf~a~~i~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 288 (289)
T cd01164 218 LVSLGADGALLVTKDGVYRASPP---KVKVVSTVGAGDSMVAGFVAGLAQGLSLEEALRLAVAAGSATAFSPGT 288 (289)
T ss_pred EEecCCCCCEEEcCCcEEEecCC---CccccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccC
Confidence 99999999999987777777654 347999999999999999999999999999999999999999999986
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=289.97 Aligned_cols=288 Identities=21% Similarity=0.224 Sum_probs=229.2
Q ss_pred EEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCc
Q 020650 8 LGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGV 87 (323)
Q Consensus 8 ~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi 87 (323)
.|--++.+|++..+++ + .++......+...++||.+.|+|.++++ +| .++.++|.+|+| .|+.+++.|++.||
T Consensus 3 ~~~~~~~~D~~~~~~~--~-~~~~~~~~~~~~~~~GG~~~N~a~~l~~-lg--~~~~~i~~vG~D-~g~~i~~~l~~~gI 75 (303)
T TIGR03168 3 TVTLNPAIDLTIEVDG--L-TPGEVNRVAAVRKDAGGKGINVARVLAR-LG--AEVVATGFLGGF-TGEFIEALLAEEGI 75 (303)
T ss_pred EEEcchHHeEEEEcCc--c-ccCceeecCcccccCCcchhhHHHHHHH-cC--CCeEEEEEeCCc-hhHHHHHHHHHcCC
Confidence 4566888999999998 4 5577888888899999999999999998 56 999999999998 79999999999999
Q ss_pred eeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHHHHH
Q 020650 88 NVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEH 163 (323)
Q Consensus 88 ~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~ 163 (323)
++.++... ..|+.++.+.+ +|++..+...+ ..++++++.. ....+.+++++++|++++.. .++.+....+++.
T Consensus 76 ~~~~i~~~-~~t~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 152 (303)
T TIGR03168 76 KNDFVEVK-GETRINVKIKESSGEETELNEPG--PEISEEELEQLLEKLRELLASGDIVVISGSLPPGVPPDFYAQLIAI 152 (303)
T ss_pred CceEEECC-CCCEEeEEEEeCCCCEEEEeCcC--CCCCHHHHHHHHHHHHHhccCCCEEEEeCCCCCCCCHHHHHHHHHH
Confidence 99998754 35666666655 56555444333 2344444332 01123478999999988643 3567888899999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++++.++++|+.... .. +.+..++|++++|++|+..+++....+.++++++++.+ ...+++.+++|
T Consensus 153 ~~~~g~~v~~D~~~~~----~~---~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vviT 219 (303)
T TIGR03168 153 ARKRGAKVILDTSGEA----LR---EALAAKPFLIKPNHEELEELFGRELKTEEEIIEAAREL------LDRGAENVLVS 219 (303)
T ss_pred HHHCCCEEEEECCcHH----HH---HHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEe
Confidence 9999999999997532 11 22335799999999999999886443334566777777 56678899999
Q ss_pred eCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCCC
Q 020650 244 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPE 321 (323)
Q Consensus 244 ~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~~ 321 (323)
+|++|++++++++.+++|+++ .+++|++||||+|.|+|++++++|+++++|+++|+++|+++|++.|+..|+.++
T Consensus 220 ~g~~G~~~~~~~~~~~~~~~~---~~~vDttGAGD~F~a~~~~~l~~g~~i~~a~~~A~~~aa~~~~~~G~~~~~~~~ 294 (303)
T TIGR03168 220 LGADGALLVTKEGALKATPPK---VEVVNTVGAGDSMVAGFLAGLARGLSLEEALRFAVAAGSAAAFSPGTGLPDPED 294 (303)
T ss_pred ecCCCcEEEeCCceEEeeCCc---ceeecCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCcCCCCHHH
Confidence 999999999888877777543 478999999999999999999999999999999999999999999998787654
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=290.45 Aligned_cols=288 Identities=18% Similarity=0.176 Sum_probs=223.2
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-+.+..++++|++..+++ +|.. ...........+||.+.|+|.+|++ +| .++.++|.+|+ ..|+.+++.|++
T Consensus 2 ~~~~t~np~~D~~~~~~~--~~~~-~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vGd-~~G~~i~~~l~~- 73 (309)
T PRK13508 2 ILTVTLNPSIDISYPLDE--LKLD-TVNRVVDVSKTAGGKGLNVTRVLSE-FG--ENVLATGLIGG-ELGQFIAEHLDD- 73 (309)
T ss_pred EEEEecChHHeEEEEeCC--eeeC-CeEEecceeecCCchHHHHHHHHHH-cC--CCeEEEEEecC-hhHHHHHHHHHc-
Confidence 467889999999999998 5443 3556667889999999999999998 56 99999999996 689999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccccc-CHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFLTV-SPDSIQLVAE 162 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~ 162 (323)
||+++++...+ .|+.+..++++|+|+++...++. +..+.... ....+.+.++|++|++++.+.. +.+.+..+++
T Consensus 74 gI~~~~~~~~~-~t~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 150 (309)
T PRK13508 74 QIKHAFYKIKG-ETRNCIAILHEGQQTEILEKGPE--ISVQEADGFLHHFKQLLESVEVVAISGSLPAGLPVDYYAQLIE 150 (309)
T ss_pred CCCceEEECCC-CCeeeEEEEeCCCEEEEECCCCC--CCHHHHHHHHHHHHHhccCCCEEEEeCCCCCCcCHHHHHHHHH
Confidence 99999876543 57777777777888776554432 22222111 1123457899999999875432 3467888999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC-CCCCHHHHHHHHhcCCccccCCccEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-ETDDVEEIALKLSQWPKASEIRKRTAV 241 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~vv 241 (323)
.+++.|.++++|+.... .+.+...++.+|++++|++|++.+++.... +.+++.+.++.+ ...+.+.++
T Consensus 151 ~a~~~g~~v~~D~~~~~-----~~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~~~------~~~g~~~vv 219 (309)
T PRK13508 151 LANQAGKPVVLDCSGAA-----LQAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVLQQP------LFEGIEWII 219 (309)
T ss_pred HHHHCCCEEEEECCcHH-----HHHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHHHHH------HHcCCCEEE
Confidence 99999999999997532 122334467899999999999999874321 112334444454 456889999
Q ss_pred EeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCC
Q 020650 242 ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 242 it~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~ 318 (323)
+|+|++|++++++++.++.++++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.+....+
T Consensus 220 vT~G~~G~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~Agfi~~l~~g~~~~~al~~a~a~aa~~~~~~~~~~~~ 293 (309)
T PRK13508 220 VSLGADGAFAKHNDTFYKVDIPK---IEVVNPVGSGDSTVAGIASGLLHQEDDADLLKKANVLGMLNAQEKQTGHVN 293 (309)
T ss_pred EecCCCceEEEeCCceEEEeCCC---ccccCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCcCCCC
Confidence 99999999998887777777544 479999999999999999999999999999999999999999999886443
|
|
| >KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=279.06 Aligned_cols=297 Identities=25% Similarity=0.339 Sum_probs=237.1
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
.++.|+|+|++.+|++..+.+ +|.+++..........+||.++|+|++++| || .++.++|.||+|.+|..+.+.|
T Consensus 8 ~~~~vv~fGs~~~D~V~~~~~--~p~~ge~~~~~~f~~~~GG~~aN~Avaaar-LG--~~~afiGkvGdD~fG~~l~~~L 82 (330)
T KOG2855|consen 8 EPPLVVVFGSMLIDFVPSTRR--LPNAGETWEPPGFKTAPGGKGANQAVAAAR-LG--GRVAFIGKVGDDEFGDDLLDIL 82 (330)
T ss_pred CCceEEEeccceeeeeecccc--CCCccccccCCcceecCCCcchhhhhHHHh-cC--cceeeeecccchhhHHHHHHHH
Confidence 456899999999999999999 889999999999999999999999999999 56 9999999999999999999999
Q ss_pred HHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 83 KLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 83 ~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
+++||+++++. ..+.+|+...+.+. +|++.+..+.+++....++..+. ..+.++.++++++....+.-.+.....+
T Consensus 83 ~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~--~~~~i~~ak~~~~q~ei~~~~~~~s~~~ 160 (330)
T KOG2855|consen 83 KQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSEL--NLEVIKEAKVFHCQSEILIEEPMRSLHI 160 (330)
T ss_pred hhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccc--cHHHHhhccEEEEeeecCCcchhHHHHH
Confidence 99999999995 68889999888875 89999888888887666665332 4578999999999865432223233333
Q ss_pred HH--HHHhCCCeE--EEeCCchhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc
Q 020650 161 AE--HAAANNKVF--MMNLSAPFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE 234 (323)
Q Consensus 161 ~~--~~~~~~~~~--~~d~~~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (323)
.+ .+++.+..+ +.|+.-+.|. ...+..++.++..+|++..+.+|.+.+++. +.++. . +| +.
T Consensus 161 ~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~---~~~~~---~-~L------~~ 227 (330)
T KOG2855|consen 161 AAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGI---EDDKI---L-KL------WH 227 (330)
T ss_pred hhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccC---ccchH---H-HH------hc
Confidence 33 455555433 3344445553 234455888899999999999999988763 11222 3 44 44
Q ss_pred CCccEEEEeeCCCceEEeeCCeee-EEeceeCCCCcccCCCCcchHHHHHHHHHhhcC--CC---HHHHHHHHhHHHHHH
Q 020650 235 IRKRTAVITQGADPVVVAQDGKLK-KFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KP---IEECVRAGCYTSHVI 308 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~~~~~~~-~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g--~~---~~~a~~~A~~~Aa~~ 308 (323)
.+.|.+|||+|++|+.||+++..- +++++.+ ++||||||||+|.|||+.+|.+| .+ +++++++|+++++++
T Consensus 228 ~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V---~~VDtTGAGDsFvgal~~~L~~~~~~~~~~L~~~l~~A~a~~ai~ 304 (330)
T KOG2855|consen 228 MKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKV---KAVDTTGAGDSFVGALAVQLVRGSLLPELSLEEALRFANACGAIT 304 (330)
T ss_pred cCCCEEEEEeCCCceEEEecCCCCCCCCCccc---ccccCCCchHHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHH
Confidence 556999999999999999877544 7776555 69999999999999999999999 66 999999999999999
Q ss_pred hhhcCc--cCCCCCCC
Q 020650 309 IQRSGC--TYPEKPEF 322 (323)
Q Consensus 309 ~~~~G~--~~p~~~~~ 322 (323)
++++|+ .+|..++.
T Consensus 305 v~~~Ga~~s~p~~~~~ 320 (330)
T KOG2855|consen 305 VQRKGAIPSMPTEKEV 320 (330)
T ss_pred hhccCCCccCccHHHH
Confidence 999999 56665543
|
|
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=285.89 Aligned_cols=288 Identities=16% Similarity=0.171 Sum_probs=223.4
Q ss_pred EEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcC
Q 020650 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAG 86 (323)
Q Consensus 7 i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~g 86 (323)
+.|.-++.+|.+..+++ +|..+ ..+..+...++||++.|+|.+|++ +| .++.++|.+|+ .+|+++++.|++.|
T Consensus 2 ~~~~~~p~~d~~~~~~~--~~~~~-~~~~~~~~~~~GG~~~NvA~~la~-LG--~~v~~i~~vG~-~~G~~i~~~l~~~G 74 (309)
T TIGR01231 2 LTVTLNPSVDISYPLTA--LKLDT-VNRVQEVSKTAGGKGLNVTRVLAQ-VG--DPVLASGFLGG-KLGEFIEKELDHSD 74 (309)
T ss_pred EEEEcchHHeEEEEcCC--eeeCc-eEeeceeeecCCccHHHHHHHHHH-cC--CCeEEEEEecC-hhHHHHHHHHHHcC
Confidence 45778899999999988 65545 557788889999999999999998 56 99999999997 58999999999999
Q ss_pred ceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHHHHH
Q 020650 87 VNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEH 163 (323)
Q Consensus 87 i~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~ 163 (323)
|+++++... ..|+.++.++.+|+|+++...++. +..+.... ......+++++++|++++.+ ..+...+..+++.
T Consensus 75 V~~~~~~~~-~~t~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 151 (309)
T TIGR01231 75 IKHAFYKIS-GETRNCIAILHEGQQTEILEQGPE--ISNQEAAGFLKHFEQLLEKVEVVAISGSLPKGLPQDYYAQIIER 151 (309)
T ss_pred CceeEEECC-CCCEEeEEEEeCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHhccCCEEEEECCCCCCcCHHHHHHHHHH
Confidence 999988653 356666666667888776655532 22111100 11234578899999998753 2346788899999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC-CCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-ETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
+++.+.++++|+.... .+.+.+.++++|++++|.+|++.+++.... +.+++.++++.+ ...|.+.+++
T Consensus 152 a~~~g~~v~~D~~~~~-----~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~~~------~~~g~~~viv 220 (309)
T TIGR01231 152 CQNKGVPVVLDCSGAT-----LQTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALSQP------LFSGIEWIIV 220 (309)
T ss_pred HHhCCCeEEEECChHH-----HHHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHH------HHcCCCEEEE
Confidence 9999999999997543 122445567899999999999999874221 112233444444 4567899999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~ 318 (323)
|+|++|++++++++.++++++++ +++|||||||+|.|||+++|++|+++++|+++|+++|++++++.+....+
T Consensus 221 T~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~a~aa~~~~~~~~~~~~ 293 (309)
T TIGR01231 221 SLGAQGAFAKHGHTFYKVNIPTI---SVVNPVGSGDSTVAGITSALLNHESDHDLLKKANTLGMLNAQEAQTGHVN 293 (309)
T ss_pred ccCCCceEEEeCCeeEEeeCCcc---CcCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 99999999998877777776544 78999999999999999999999999999999999999999988875443
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=265.89 Aligned_cols=290 Identities=22% Similarity=0.214 Sum_probs=242.9
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-+.+.=++.+|.+..++. + ..+...+..+....+||+|.|||.+|+. +| .++...|.+|.+ .|+.+.+.|+++
T Consensus 2 I~TvTLNPaiD~~~~l~~--l-~~g~vNr~~~~~~~aGGKGINVa~vL~~-lG--~~~~a~GflGg~-tg~~~~~~l~~~ 74 (310)
T COG1105 2 IYTVTLNPALDYTVFLDE--L-ELGEVNRVRAVTKTAGGKGINVARVLKD-LG--IPVTALGFLGGF-TGEFFVALLKDE 74 (310)
T ss_pred eEEEecChhHhheeeccc--c-cccceeeeccceecCCCCceeHHHHHHH-cC--CCceEEEecCCc-cHHHHHHHHHhc
Confidence 467778999999999977 3 4588999999999999999999999997 66 999999999995 789999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC-cchhhh-hccccEEEEecccc-ccCHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK-PENWAL-VEKAKYFYIAGFFL-TVSPDSIQLVAE 162 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~v~i~~~~~-~~~~~~~~~~~~ 162 (323)
||..++++.. ..|+.++-+.++..........+.+.++.++++. .+.... +.+.|+|+++|..+ .++.+.+.++++
T Consensus 75 gi~~~fv~v~-g~TRinvki~~~~~~~~Tein~~Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~ 153 (310)
T COG1105 75 GIPDAFVEVK-GDTRINVKILDEEDGEETEINFPGPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIR 153 (310)
T ss_pred CCCceEEEcc-CCCeeeEEEEecCCCcEEEecCCCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHH
Confidence 9999999875 4688888877643322223334445677666655 222333 77899999999774 677899999999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAV 241 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv 241 (323)
.+++.+.++++|.+... +...+ ....++++|.+|++.+++....+.+|..++++.+ ...|.+.++
T Consensus 154 ~~~~~g~~vilD~Sg~~--------L~~~L~~~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l------~~~g~~~Vi 219 (310)
T COG1105 154 ILRQQGAKVILDTSGEA--------LLAALEAKPWLIKPNREELEALFGRELTTLEDVIKAAREL------LAEGIENVI 219 (310)
T ss_pred HHHhcCCeEEEECChHH--------HHHHHccCCcEEecCHHHHHHHhCCCCCChHHHHHHHHHH------HHCCCCEEE
Confidence 99999999999998765 33433 3478888999999999998776666788888887 778999999
Q ss_pred EeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCC
Q 020650 242 ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 320 (323)
Q Consensus 242 it~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~ 320 (323)
|++|++|+++.+++..+++.+ |++++++++||||++.|||++++.+++++++++++|+++|+.++++.+...|..+
T Consensus 220 VSlG~~Gal~~~~~~~~~a~~---p~~~vvstVGAGDs~VAGf~~~~~~~~~~e~~l~~avA~g~a~~~~~~~~~~~~~ 295 (310)
T COG1105 220 VSLGADGALLVTAEGVYFASP---PKVQVVSTVGAGDSMVAGFLAGLLKGKSLEEALRFAVACGAAAASQKGTGIPDLD 295 (310)
T ss_pred EEecCcccEEEccCCeEEEeC---CCcceecCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCCCHH
Confidence 999999999999999888874 3468999999999999999999999999999999999999999999998777665
|
|
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=294.96 Aligned_cols=294 Identities=14% Similarity=0.136 Sum_probs=219.2
Q ss_pred cceEEEeCCceeeeEeecC--hhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVD--DDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~--~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
.++|+|+|++++|++..++ +...+.+............+|| ++|+|.+|++ +| .++.++|.+|+|..|+.+++.
T Consensus 10 ~~~ilviG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~la~-LG--~~v~~i~~vG~D~~g~~i~~~ 85 (473)
T PRK11316 10 RAGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVNQIEERPGG-AANVAMNIAS-LG--AQARLVGLTGIDEAARALSKL 85 (473)
T ss_pred CCcEEEECccEEeeeeecccceeCCCCCCCEEEeeeEEecCcH-HHHHHHHHHH-cC--CcEEEEEEEcCCHHHHHHHHH
Confidence 4589999999999998752 3111233345666677888999 6999999998 56 999999999999999999999
Q ss_pred HHHcCceeEEeecCCCCceeEEEEEeCCccceeeccc-ccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 82 SKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 82 l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
|++.||+++++...+.+|+.++++.+.+......... ....+.++.+.. ...+.++++++++++++.... .+.+..+
T Consensus 86 L~~~gI~~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~~~~v~is~~~~~~-~~~~~~~ 163 (473)
T PRK11316 86 LAAVGVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLLE-RIEQALPSIGALVLSDYAKGA-LASVQAM 163 (473)
T ss_pred HHHcCCceeEEEcCCCCCCeeEEEEeCCceEEecccccCCCchhHHHHHH-HHHHHhccCCEEEEecCCccc-hhHHHHH
Confidence 9999999999876667788888777533221111111 111112222111 123457899999998764322 3567889
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
++.+++.+.++++|+.... + ..++.+|++++|.+|++.+++... +.++..+.++.+. ...+.+.+
T Consensus 164 ~~~~k~~g~~vv~Dp~~~~--------~-~~~~~~dil~pN~~Ea~~l~g~~~-~~~~~~~~~~~l~-----~~~g~~~v 228 (473)
T PRK11316 164 IQLARKAGVPVLIDPKGTD--------F-ERYRGATLLTPNLSEFEAVVGKCK-DEAELVEKGMKLI-----ADYDLSAL 228 (473)
T ss_pred HHHHHhcCCeEEEeCCCCC--------c-cccCCCeEECcCHHHHHHHhCCCC-CHHHHHHHHHHHH-----HhcCCCEE
Confidence 9999999999999997532 1 346789999999999999987321 1122333444442 34688999
Q ss_pred EEeeCCCceEEeeCCe-eeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCC
Q 020650 241 VITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319 (323)
Q Consensus 241 vit~G~~G~~~~~~~~-~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~ 319 (323)
+||+|++|++++++++ .+++|+++ ++++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|+..|+.
T Consensus 229 vVT~G~~G~~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~aa~~~~l~~g~~~~~al~~A~a~Aa~~v~~~G~~~~~~ 305 (473)
T PRK11316 229 LVTRSEQGMTLLQPGKAPLHLPTQA---REVYDVTGAGDTVISVLAAALAAGNSLEEACALANAAAGVVVGKLGTSTVSP 305 (473)
T ss_pred EEEecCCCcEEEecCCceEEecCcC---CCCCCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcccCCCccCCH
Confidence 9999999998887665 46666543 4789999999999999999999999999999999999999999999977765
Q ss_pred CC
Q 020650 320 PE 321 (323)
Q Consensus 320 ~~ 321 (323)
++
T Consensus 306 ~~ 307 (473)
T PRK11316 306 IE 307 (473)
T ss_pred HH
Confidence 44
|
|
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=260.57 Aligned_cols=266 Identities=20% Similarity=0.288 Sum_probs=202.6
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
.|+|+|++++|++..... .....+||.+.|+|.++++ ++ ++.++|.+|+| +|+.+++.|++.
T Consensus 1 ~v~~~G~~~~D~~~~~~~-------------~~~~~~GG~a~N~a~~la~-lg---~v~~i~~vG~D-~g~~~~~~l~~~ 62 (277)
T cd01946 1 SLLVVGSVAFDAIETPFG-------------KVDKALGGSATYFSLSASY-FT---DVRLVGVVGED-FPEEDYKLLNSH 62 (277)
T ss_pred CeEEEEEeeeeeecCCCc-------------eeeeccCchHHHHHHHHHH-hc---cceeEEeccCc-ChHHHHHHHHhc
Confidence 389999999999943221 1356799999999999998 44 49999999999 899999999999
Q ss_pred CceeEEeec-CCCCceeEEEEE--e-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHH
Q 020650 86 GVNVHYYED-ESASTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161 (323)
Q Consensus 86 gi~~~~~~~-~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 161 (323)
||+++++.. ++.+|....... + +++++.....+....+.+. ..+.+++++++|+++ ++++....++
T Consensus 63 gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~----~~~~~~~~~~ 132 (277)
T cd01946 63 NIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDTDLNVFADFDPQ------LPEHYKDSEFVFLGN----IAPELQREVL 132 (277)
T ss_pred cCcceeEEEecCCCeEEEeeEehhhcccccchhhhhhHHhhcCCC------ChHHhhcCCEEEECC----CCHHHHHHHH
Confidence 999999854 545552211111 1 2222222222211122111 224578899999975 3567778888
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAV 241 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv 241 (323)
+.+++. .++++|+. ..|.....+.++++++++|++++|++|++.+++ .++++++++.+ ...+++.++
T Consensus 133 ~~~~~~-~~v~~D~~-~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g-----~~~~~~~~~~l------~~~g~~~vv 199 (277)
T cd01946 133 EQVKDP-KLVVMDTM-NFWISIKPEKLKKVLAKVDVVIINDGEARQLTG-----AANLVKAARLI------LAMGPKALI 199 (277)
T ss_pred HHHHhC-CEEEEccH-HHhhhhhHHHHHHHhccCCEEeCCHHHHHHHhC-----CchHHHHHHHH------HHcCCCEEE
Confidence 888776 78999984 345433456678899999999999999999976 34677888888 667899999
Q ss_pred EeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC-----CHHHHHHHHhHHHHHHhhhcCc
Q 020650 242 ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-----PIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 242 it~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~-----~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
+|+|.+|++++++++.++++++++ .+++|||||||+|.|||+++|++|+ ++++|+++|+++|+++|++.|+
T Consensus 200 vt~G~~G~~~~~~~~~~~~~~~~~--~~~vDttGAGDaF~Agfl~~l~~~~~~~~~~~~~a~~~a~~~aa~~~~~~G~ 275 (277)
T cd01946 200 IKRGEYGALLFTDDGYFAAPAYPL--ESVFDPTGAGDTFAGGFIGYLASQKDTSEANMRRAIIYGSAMASFCVEDFGT 275 (277)
T ss_pred EecCCCcEEEEECCceEEcCCccc--CccCCCCCchHHHHHHHHHHHHhCCCcchhhHHHHHHHhHHHHhhhhhhcCC
Confidence 999999999998887777776543 2478999999999999999999884 6999999999999999999996
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=243.37 Aligned_cols=290 Identities=17% Similarity=0.236 Sum_probs=236.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|..++.|+|+|.+.+|.+..++. .|.++...+..+..++-||++.|++.+|+. || .++.|+|.+......+++++
T Consensus 1 m~~~k~VLcVG~~~lD~iTivd~--~~fe~~~~r~~~g~wqRgG~asNvcTvlrl-LG--~~cef~Gvlsr~~~f~~lLd 75 (308)
T KOG2947|consen 1 MEEPKQVLCVGCTVLDVITIVDK--YPFEDSEIRCLSGRWQRGGNASNVCTVLRL-LG--APCEFFGVLSRGHVFRFLLD 75 (308)
T ss_pred CCCcceEEEeccEEEEEEEeccC--CCCCccceehhhhhhhcCCCcchHHHHHHH-hC--CchheeeecccchhHHHHHH
Confidence 66678999999999999999999 778889999999999999999999999995 66 99999999999999999999
Q ss_pred HHHHcCceeEEeecCCCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 81 NSKLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 81 ~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
.|+++|||++++...+...+.+.++++ .|.|+++......+..+.+++.+ -.+.+..|+|+.+.++...-.+++
T Consensus 76 dl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~k----vdl~qy~WihfE~Rnp~etlkM~~ 151 (308)
T KOG2947|consen 76 DLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEK----VDLTQYGWIHFEARNPSETLKMLQ 151 (308)
T ss_pred HHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhh----cccceeeeEEEecCChHHHHHHHH
Confidence 999999999999776666777666664 68889988877777777777765 347899999999865332234555
Q ss_pred HHHHHHHhCC----CeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc
Q 020650 159 LVAEHAAANN----KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE 234 (323)
Q Consensus 159 ~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (323)
.++++..+.+ +.+++|+..+ .|....+....|+++.+++-++.++ ..+++|+++.+....+ .+
T Consensus 152 ~I~~~N~r~pe~qrI~vSvd~en~------req~~~l~am~DyVf~sK~~a~~~g------fks~rea~~~l~~r~~-~~ 218 (308)
T KOG2947|consen 152 RIDAHNTRQPEEQRIRVSVDVENP------REQLFQLFAMCDYVFVSKDVAKHLG------FKSPREACEGLYGRVP-KG 218 (308)
T ss_pred HHHHhhcCCCccceEEEEEEecCc------HHHHHHHhhcccEEEEEHHHHhhhc------cCCHHHHHHHHHhhcc-cC
Confidence 6666554433 5688888764 3668889999999999999888875 3577888777743222 22
Q ss_pred CCccEEEEeeCCCceEEe-eCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHH-hhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 235 IRKRTAVITQGADPVVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ-LVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~-~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~-l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
.....+|+-+++.|+-.. ..++.+++++++.| +++|+.|+||+|.||++|+ +.++.++.||+.|||++|++++...
T Consensus 219 ~pkpv~I~~w~~eGA~~l~adg~yfev~a~~pp--kvVD~lg~~DtF~A~vIyA~lk~~r~l~eAvdfg~rvas~Kl~g~ 296 (308)
T KOG2947|consen 219 KPKPVLICPWASEGAGALGADGKYFEVDAFKPP--KVVDTLGAGDTFNAGVIYALLKQGRSLAEAVDFGNRVASKKLGGQ 296 (308)
T ss_pred CCCcEEEeccccccccccCCCCCEEecCCCCCc--cceeeccCCCcchHHHHHHHHHhhhhHHHHHHHHHHhhhcccccc
Confidence 234667888999998655 56678888887544 8999999999999999999 5679999999999999999999999
Q ss_pred Cc
Q 020650 313 GC 314 (323)
Q Consensus 313 G~ 314 (323)
|.
T Consensus 297 Gf 298 (308)
T KOG2947|consen 297 GF 298 (308)
T ss_pred cc
Confidence 87
|
|
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=254.68 Aligned_cols=251 Identities=16% Similarity=0.124 Sum_probs=192.3
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+++|++++|++..++. ....+||++.|+|.+|++ +| .++.++|.+|+|..|+ ++.|++.
T Consensus 1 ~il~iG~~~iD~~~~~~~--------------~~~~~GG~~~Nva~~la~-lG--~~~~~i~~vG~D~~g~--~~~l~~~ 61 (254)
T cd01937 1 KIVIIGHVTIDEIVTNGS--------------GVVKPGGPATYASLTLSR-LG--LTVKLVTKVGRDYPDK--WSDLFDN 61 (254)
T ss_pred CeEEEcceeEEEEecCCc--------------eEEecCchhhhHHHHHHH-hC--CCeEEEEeeCCCchHH--HHHHHHC
Confidence 589999999999986432 568899999999999998 56 9999999999999998 6889999
Q ss_pred CceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 164 (323)
||++..+. ...|+.+.+.++ ++++.++...+....+... ...+.++|++|++++ +++....+.+.+
T Consensus 62 gv~~~~~~--~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 128 (254)
T cd01937 62 GIEVISLL--STETTTFELNYTNEGRTRTLLAKCAAIPDTES-------PLSTITAEIVILGPV----PEEISPSLFRKF 128 (254)
T ss_pred CcEEEEec--CCCeEEEEEEecCCCCeeeeeccccCCccccc-------ccccCcccEEEECCC----cchhcHHHHhhh
Confidence 99975543 334555555555 5677665554433222111 123678999999864 334444444332
Q ss_pred HhCCCeEEEeCCchhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 165 AANNKVFMMNLSAPFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.++++|+... |. ......++++++++|++++|++|++.+ .+.+++++.+ ...+++.+++
T Consensus 129 ----~~v~~D~~~~-~~~~~~~~~~~~~~l~~~di~~~n~~E~~~~--------~~~~~~~~~l------~~~g~~~vvv 189 (254)
T cd01937 129 ----AFISLDAQGF-LRRANQEKLIKCVILKLHDVLKLSRVEAEVI--------STPTELARLI------KETGVKEIIV 189 (254)
T ss_pred ----hheeEccccc-eeeccccchHHHhhcccCcEEEEcHHHHhhc--------CCHHHHHHHH------HHcCCCEEEE
Confidence 5788888642 21 111222568899999999999999872 3577888887 5678899999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
|.|++|++++++++.+++++++ .+++||+||||+|.|+|+++|.+|+++++|+++|+++|+++|+
T Consensus 190 t~g~~g~~~~~~~~~~~~~~~~---~~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 190 TDGEEGGYIFDGNGKYTIPASK---KDVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAAAAKFIE 254 (254)
T ss_pred eeCCcceEEEECCccEEccccC---ceeccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999888877777654 3789999999999999999999999999999999999999874
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=258.25 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=202.8
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
+.++|+|+|++++|++..++. .....+||.++|+|.++++ +| .++.++|.+|+|..
T Consensus 10 ~~~~vlvvG~~~~D~i~~~g~-------------~~~~~~GG~a~N~A~alar-LG--~~~~lis~VG~D~~-------- 65 (335)
T PLN02630 10 PQRRVLIVGNYCHDVLIQNGS-------------VTAESLGGAASFISNVLDA-LS--VECELVSKVGPDFL-------- 65 (335)
T ss_pred CCCCEEEEeeeeeeEEEeCCc-------------EEEEecCcHHHHHHHHHHH-cC--CceEEEEEecCCcc--------
Confidence 357999999999999987532 1457899999999999998 56 99999999999953
Q ss_pred HHcCceeEEeecCCCCceeEEEEEeC------CccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHH
Q 020650 83 KLAGVNVHYYEDESASTGTCAVCVVG------GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS 156 (323)
Q Consensus 83 ~~~gi~~~~~~~~~~~t~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~ 156 (323)
.+++...+..++.+|+.+++++++ ++++++...+++..++++++.. ..+...+++++.+ +.+++.
T Consensus 66 --~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di~~----~~~~~~~~~~l~~---ei~~e~ 136 (335)
T PLN02630 66 --YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDIPD----MRYEFGMAVGVAG---EILPET 136 (335)
T ss_pred --ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHCCH----HHhcccceeeecC---CCcHHH
Confidence 367766554466789998887754 3778888889998999888864 2467778888865 345788
Q ss_pred HHHHHHHHHh-----CCCeEEEeCCch---hHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhc
Q 020650 157 IQLVAEHAAA-----NNKVFMMNLSAP---FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 228 (323)
Q Consensus 157 ~~~~~~~~~~-----~~~~~~~d~~~~---~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~ 228 (323)
...+++.++. +++.+.+|+.+. .|.. ....+..+++.+|++++|++|+..+ +.+++.
T Consensus 137 ~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~-~~~~~~~~L~~iDil~~ne~Ea~~l---------~~~~~~----- 201 (335)
T PLN02630 137 LERMVEICDVVVVDIQALIRVFDPVDGTVKLVKL-EETGFYDMLPRIGFLKASSEEALFI---------DVEEVR----- 201 (335)
T ss_pred HHHHHHHhhhheeccCceEEecCCcccccccchh-hHHHHHHHHHhCCEEEecHHHHhhc---------CHHHHc-----
Confidence 8899998887 788888998753 1210 1123568899999999999999875 222221
Q ss_pred CCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHH
Q 020650 229 WPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 229 ~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~ 308 (323)
+ ...+++|+|++|++++++++.++++++++ +++|||||||+|.|||++++++|+++++|+++|+++|+++
T Consensus 202 -----~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vDttGAGDaF~agfi~~l~~g~~~~~a~~~A~a~aa~~ 271 (335)
T PLN02630 202 -----Q--KCCVIVTNGKKGCRIYWKDGEMRVPPFPA---IQVDPTGAGDSFLGGFVAGLVQGLAVPDAALLGNYFGSLA 271 (335)
T ss_pred -----c--CCEEEEEECCCceEEEECCeeEEeCCCCC---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 1 13799999999999998888778776544 7899999999999999999999999999999999999999
Q ss_pred hhhcCc
Q 020650 309 IQRSGC 314 (323)
Q Consensus 309 ~~~~G~ 314 (323)
+++.|.
T Consensus 272 v~~~G~ 277 (335)
T PLN02630 272 VEQVGI 277 (335)
T ss_pred hCcCCC
Confidence 999995
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=245.33 Aligned_cols=287 Identities=17% Similarity=0.179 Sum_probs=230.9
Q ss_pred cceEEEeCCceeeeEeec--ChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVV--DDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~--~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
+.+|+|+|.+++|.+++. .++.++.|-....+.....++|| +.|+|.+++. +| .++.++|.+|+|..|+.+...
T Consensus 10 ~~kVLVvGDvmLDrY~~G~~~RISPEAPVPVv~v~~e~~rlGG-AaNVa~Nias-LG--a~a~l~GvvG~Deag~~L~~~ 85 (467)
T COG2870 10 QAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEKEEERLGG-AANVAKNIAS-LG--ANAYLVGVVGKDEAGKALIEL 85 (467)
T ss_pred CCcEEEEcceeeeeeccccccccCCCCCCceEEeccccccccc-HHHHHHHHHH-cC--CCEEEEEeeccchhHHHHHHH
Confidence 468999999999998884 56567778888999999999999 6999999997 56 999999999999999999999
Q ss_pred HHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccccEEEEeccccccCHHHHHH
Q 020650 82 SKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFLTVSPDSIQL 159 (323)
Q Consensus 82 l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 159 (323)
|...+++..++..+.++|.....++... .+++...- ...+....... +.+...+.+.+.++++.|..+.-.. ...
T Consensus 86 l~~~~i~~~l~~~~~r~T~~K~Rv~s~n-QQllRvD~-Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~-~q~ 162 (467)
T COG2870 86 LKANGIDSDLLRDKNRPTIVKLRVLSRN-QQLLRLDF-EEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTN-VQK 162 (467)
T ss_pred HHhcCcccceEeecCCCceeeeeeeccc-ceEEEecc-cccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchh-HHH
Confidence 9999999888888888898887766422 22222211 01111111111 2244668899999999998654333 889
Q ss_pred HHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 160 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+++.|++.++++.+||.+.. + ...+.+.++.+|..|++...+.+..+ +++.+...+|. ...+...
T Consensus 163 ~I~~ar~~~~pVLvDPKg~D--------f-~~Y~GAtLiTPN~~E~~~~vg~~~~e-~el~~~g~kL~-----~~~~L~a 227 (467)
T COG2870 163 MIDLAREAGIPVLVDPKGKD--------F-EKYRGATLITPNLKEFEEAVGKCKSE-EELEERGQKLK-----EELDLSA 227 (467)
T ss_pred HHHHHHHcCCcEEECCCCcc--------h-hhhCCCeecCCCHHHHHHHHcccccH-HHHHHHHHHHH-----HhhCcce
Confidence 99999999999999998754 2 34678999999999999998876544 44556555553 4456789
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~ 315 (323)
+++|++++|+.+++.++..|+|+.. .++.|.|||||+-+|.|..+|+.|.+++||+.+||++|+.++.+.|..
T Consensus 228 lLvTRsE~GMtL~~~~~~~h~pt~A---kEVyDVTGAGDTVIa~la~~laaG~s~~eAc~lAN~AagiVVgKlGTa 300 (467)
T COG2870 228 LLVTRSEKGMTLFQEGKPLHFPARA---KEVYDVTGAGDTVIAVLAAALAAGASLEEACELANAAAGIVVGKLGTA 300 (467)
T ss_pred EEEEeccCCceeecCCcccccchhh---eeeeeccCCCchHHHHHHHHHHcCCCHHHHHHHhhhhcceEEeeccce
Confidence 9999999999999888878888754 389999999999999999999999999999999999999999999984
|
|
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=205.41 Aligned_cols=195 Identities=26% Similarity=0.324 Sum_probs=161.4
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+++|++++|.+..+++ .|.++..++..+....+||.+.|+|.+|++ +| .++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~-LG--~~~~~~~------------------ 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVDA--LPLPGGLVRPGDTEERAGGGAANVAVALAR-LG--VSVTLVG------------------ 57 (196)
T ss_pred CEEEEccceEEEEEEecc--CCCCCCeEEeceeeecCCCcHHHHHHHHHH-CC--CcEEEEE------------------
Confidence 489999999999999998 778888899999999999999999999998 66 9999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 165 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~ 165 (323)
+|++|+++..+. .+...++++.++
T Consensus 58 ------------------------------------------------------~~~v~i~~~~~~--~~~~~~~~~~~~ 81 (196)
T cd00287 58 ------------------------------------------------------ADAVVISGLSPA--PEAVLDALEEAR 81 (196)
T ss_pred ------------------------------------------------------ccEEEEecccCc--HHHHHHHHHHHH
Confidence 789999986532 367888999999
Q ss_pred hCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeC
Q 020650 166 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQG 245 (323)
Q Consensus 166 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G 245 (323)
+.+.++++|+......... +.+.++++++|++++|.+|++.+++....+.++..++++.+ ...+.+.+++|+|
T Consensus 82 ~~~~~v~~D~~~~~~~~~~-~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~l------~~~g~~~vvvt~G 154 (196)
T cd00287 82 RRGVPVVLDPGPRAVRLDG-EELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALL------LSKGPKVVIVTLG 154 (196)
T ss_pred HcCCeEEEeCCcccccccc-chHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHHH------HhcCCCEEEEEEC
Confidence 9999999999765422211 22567889999999999999999876444334455777777 6678899999999
Q ss_pred CCceEEee-CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhh
Q 020650 246 ADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289 (323)
Q Consensus 246 ~~G~~~~~-~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~ 289 (323)
++|+++++ ++..+++++++ .+++||+||||+|.|||+++|+
T Consensus 155 ~~g~~~~~~~~~~~~~~~~~---~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 155 EKGAIVATRGGTEVHVPAFP---VKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred CCccEEEecCCceEEcCCcc---CCcccCCCchHHHHHHHHHHhC
Confidence 99999998 66677766543 4789999999999999999974
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.1e-19 Score=151.07 Aligned_cols=165 Identities=15% Similarity=0.157 Sum_probs=123.7
Q ss_pred ccccEEEEecccc-ccCHHHHHHHHHHHHhC--CCeEEEeCC----chhH--HHHHHHHHHhhcC-CCcEEEeCHHHHHH
Q 020650 138 EKAKYFYIAGFFL-TVSPDSIQLVAEHAAAN--NKVFMMNLS----APFI--CEFFKDALEKVLP-YMDYIFGNETEART 207 (323)
Q Consensus 138 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~d~~----~~~~--~~~~~~~~~~~l~-~~dvl~~n~~e~~~ 207 (323)
...+++. .|+.+ ....+.+.++++.+++. +.++++|+. ...| .+...+.+.+++. ++|++++|.+|++.
T Consensus 71 ~~~~~v~-~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~ 149 (254)
T cd01173 71 LEYDAVL-TGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELEL 149 (254)
T ss_pred ccCCEEE-EecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHH
Confidence 4567774 55432 22346777888888776 788999983 2222 2335556667666 99999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC------ceEEeeCCeeeEEeceeCCCCcccCCCCcchHHH
Q 020650 208 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD------PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 281 (323)
Q Consensus 208 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~------G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ 281 (323)
+++....+.++++++++.+ .+.+++.+++|.|.. |++++++++.++++.+.. +. ++|++||||+|.
T Consensus 150 l~g~~~~~~~~~~~~~~~l------~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~~GaGD~f~ 221 (254)
T cd01173 150 LTGKKINDLEDAKAAARAL------HAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKI-PF-PAYFNGTGDLFA 221 (254)
T ss_pred HcCCCcCCHHHHHHHHHHH------HHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeecc-CC-CCCcCChHHHHH
Confidence 9875443345677888888 667899999999985 788777665555543333 22 699999999999
Q ss_pred HHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 282 GGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 282 ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
|+|+++|++|+++++|+++|+++....++.
T Consensus 222 a~~~~~l~~g~~~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 222 ALLLARLLKGKSLAEALEKALNFVHEVLEA 251 (254)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998777654
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=147.25 Aligned_cols=160 Identities=19% Similarity=0.184 Sum_probs=123.3
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCch------hHHHHHHH-HHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSAP------FICEFFKD-ALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~------~~~~~~~~-~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
.+.+.++- ..+.+.+..+++.+++.+.+ +++||... .+.....+ ..+.+++.+|++++|..|++.|++.
T Consensus 73 ~~~ikiG~---l~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g~ 149 (268)
T PRK12412 73 VDALKTGM---LGSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSGV 149 (268)
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhCc
Confidence 78888753 23678888999999888865 88998531 11112222 2446889999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCce------EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 212 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~------~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
...+.+++.++++.+ .+.|++.++||.|..|. ++++++..++++.+ +++.+|++||||+|.|+|+
T Consensus 150 ~~~~~~~~~~aa~~l------~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~---~v~~~~t~GaGD~f~aa~a 220 (268)
T PRK12412 150 KINSLEDMKEAAKKI------HALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESE---KIDTTNTHGAGCTYSAAIT 220 (268)
T ss_pred CCCCHHHHHHHHHHH------HhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeC---ccCCCCCCchHHHHHHHHH
Confidence 433334677888888 66789999999998753 34555555555543 4478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
++|++|+++++|+++|.++...++++
T Consensus 221 a~l~~g~~l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 221 AELAKGKPVKEAVKTAKEFITAAIRY 246 (268)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988876
|
|
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-18 Score=145.76 Aligned_cols=162 Identities=19% Similarity=0.218 Sum_probs=124.7
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCc------hhHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSA------PFICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~------~~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
+.+.+.++- ..+.+.+..+++.+++++. ++++||.. +.+.....+.+ +.+++++|++++|..|++.|++
T Consensus 67 ~~~aikiG~---l~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 143 (254)
T TIGR00097 67 PVDAAKTGM---LASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLPLATLITPNLPEAEALLG 143 (254)
T ss_pred CCCEEEECC---cCCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccccccEecCCHHHHHHHhC
Confidence 357777752 2367889999999998888 69999742 12222222223 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCC----Cce-EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA----DPV-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~----~G~-~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
....+.+++.++++.+ ...|++.+++|.|+ +|. +++++++.++++.+ +++.+|++||||+|.|+|+
T Consensus 144 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~GaGD~f~aala 214 (254)
T TIGR00097 144 TKIRTEQDMIKAAKKL------RELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAP---RIETKNTHGTGCTLSAAIA 214 (254)
T ss_pred CCCCCHHHHHHHHHHH------HhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEec---ccCCCCCCChHHHHHHHHH
Confidence 5433334577888888 66789999999997 344 55677666666643 4478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++|.+|+++++|+++|++++...+++.
T Consensus 215 a~la~g~~l~eA~~~A~~~~~~~i~~~ 241 (254)
T TIGR00097 215 ANLAKGLSLKEAVKEAKEFVTGAIRYG 241 (254)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999763
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-18 Score=148.42 Aligned_cols=163 Identities=12% Similarity=0.172 Sum_probs=116.4
Q ss_pred hccccEEEEeccccc-cCHHHHHHHHHHHHhCC--CeEEEeCC------chhHHHHHHHHH-HhhcCCCcEEEeCHHHHH
Q 020650 137 VEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANN--KVFMMNLS------APFICEFFKDAL-EKVLPYMDYIFGNETEAR 206 (323)
Q Consensus 137 ~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~d~~------~~~~~~~~~~~~-~~~l~~~dvl~~n~~e~~ 206 (323)
+.+.|++ +.|+.+. ...+.+.++++.+++.+ ..+++|+. .....+...+.+ +.+++++|++++|..|++
T Consensus 72 ~~~~d~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~~adii~pN~~Ea~ 150 (286)
T TIGR00687 72 LNQCDAV-LSGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIPVADIITPNQFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccccccEecCCHHHHH
Confidence 3578887 5565432 22357778888887765 55778882 111112333444 468899999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe-eCCCce--------EEeeCCeeeEEeceeCCCCc-ccCCCCc
Q 020650 207 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT-QGADPV--------VVAQDGKLKKFPVIVLPKDK-LVDTNGA 276 (323)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit-~G~~G~--------~~~~~~~~~~~~~~~~~~~~-~~d~tGA 276 (323)
.+++....+.++..++++.+ .+.|++.+++| .|.+|+ +++++++.++.+.++ .. ++|++||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l------~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~Ga 221 (286)
T TIGR00687 151 LLTGRKINTVEEALAAADAL------IAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPL---AVFMRQPVGT 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHH------HHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccC---cCCCCCCCCh
Confidence 99875433334566777877 66788999999 687775 445555555555332 24 6899999
Q ss_pred chHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 277 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 277 GDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
||+|.|+|+++|++|+++++|+++|+++....+
T Consensus 222 GD~f~A~~l~~l~~g~~~~~al~~A~~~v~~~l 254 (286)
T TIGR00687 222 GDLIAALLLATLLHGNSLKEALEKTVSAVYHVL 254 (286)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999933333
|
ThiD and related proteins form an outgroup. |
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-18 Score=147.93 Aligned_cols=166 Identities=17% Similarity=0.175 Sum_probs=120.5
Q ss_pred hccccEEEEeccccc-cCHHHHHHHHHHHHhCC--CeEEEeCCch-----hH-HHHHHHHH-HhhcCCCcEEEeCHHHHH
Q 020650 137 VEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANN--KVFMMNLSAP-----FI-CEFFKDAL-EKVLPYMDYIFGNETEAR 206 (323)
Q Consensus 137 ~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~d~~~~-----~~-~~~~~~~~-~~~l~~~dvl~~n~~e~~ 206 (323)
+...+++ +.|+.+. ...+.+.++++.+++.+ ..+++||.-. .| .+...+.+ +.+++++|++++|..|++
T Consensus 72 l~~~~~v-~~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea~ 150 (286)
T PRK05756 72 LGECDAV-LSGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHHH
Confidence 3467866 5565432 22367778888777665 4577775311 11 12223333 458999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC--------ceEEeeCCeeeEEeceeCCCCcc-cCCCCcc
Q 020650 207 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD--------PVVVAQDGKLKKFPVIVLPKDKL-VDTNGAG 277 (323)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~--------G~~~~~~~~~~~~~~~~~~~~~~-~d~tGAG 277 (323)
.|++....+.+++.++++++ .+.|++.++||.|.. |++++++++.++++.++ .+. +|++|||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l------~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~v~~~GaG 221 (286)
T PRK05756 151 WLSGRPVETLEDAVAAARAL------IARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPL---VDFMRQPVGVG 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHH------HHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCc---cCCCCCCCChH
Confidence 99875443334566777778 667899999999876 46677777666665433 355 6999999
Q ss_pred hHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 278 DAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 278 Daf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+|.|+|+++|++|+++++|+++|++.....++..
T Consensus 222 D~f~a~~~a~l~~g~~~~~al~~A~~~~~~~i~~~ 256 (286)
T PRK05756 222 DLTSALFLARLLQGGSLEEALEHTTAAVYEVMART 256 (286)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888653
|
|
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=143.74 Aligned_cols=162 Identities=19% Similarity=0.211 Sum_probs=123.4
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCc------hhHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSA------PFICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~------~~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.+.++- ..+.+.+..+++.+++.+. ++++||.. +.+.....+.+ +.+++.+|++++|..|++.|++
T Consensus 73 ~~~ai~iG~---l~~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 149 (266)
T PRK06427 73 RIDAVKIGM---LASAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLPLATLITPNLPEAEALTG 149 (266)
T ss_pred CCCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhCcCeEEcCCHHHHHHHhC
Confidence 567777753 2267788888888888775 78899841 22222233334 4689999999999999999987
Q ss_pred hcCCCCCC-HHHHHHHHhcCCccccCCccEEEEeeCC--Cce----EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 VQGWETDD-VEEIALKLSQWPKASEIRKRTAVITQGA--DPV----VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~vvit~G~--~G~----~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
....+.++ ++++++.+ .+.|++.++||.|. +|. +++++++.++++.++ ...+|++|+||+|.|+
T Consensus 150 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~GaGD~f~a~ 220 (266)
T PRK06427 150 LPIADTEDEMKAAARAL------HALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPR---IPTKNTHGTGCTLSAA 220 (266)
T ss_pred CCCCCcHHHHHHHHHHH------HhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeee---ECCCCCCChHHHHHHH
Confidence 54333233 67788888 66789999999998 553 566666666666543 3678999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+++|++|+++++|+++|++++..++++.
T Consensus 221 l~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 249 (266)
T PRK06427 221 IAAELAKGASLLDAVQTAKDYVTRAIRHA 249 (266)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998774
|
|
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-17 Score=140.22 Aligned_cols=161 Identities=20% Similarity=0.230 Sum_probs=121.8
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCch------hHHHHHHHH-HHhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSAP------FICEFFKDA-LEKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~------~~~~~~~~~-~~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.+.++ +. .+++.+..+.+.+++. +.++++||... .+.+...+. .+.+++++|++++|..|++.|++
T Consensus 68 ~~~~i~~G-~l--~~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 144 (242)
T cd01169 68 PVDAIKIG-ML--GSAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELLTG 144 (242)
T ss_pred CCCEEEEC-CC--CCHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHHhC
Confidence 56888874 22 3578888888888876 78899998431 112222233 35667999999999999999988
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc----e-EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP----V-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G----~-~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
....+.++..++++.+ ...+.+.++||.|+.| . +++++++.++++.++. ..+|++|+||+|.|+|+
T Consensus 145 ~~~~~~~~~~~~~~~l------~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~l~ 215 (242)
T cd01169 145 LEIATEEDMMKAAKAL------LALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRI---DTKNTHGTGCTLSSAIA 215 (242)
T ss_pred CCCCCHHHHHHHHHHH------HhcCCCEEEEecCCCCCCceeEEEEECCcEEEEeccee---CCCCCCChHHHHHHHHH
Confidence 5433334456677777 6678999999999875 3 5667666666665443 67999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
++|++|+++++|+++|++.-...+++
T Consensus 216 a~l~~g~~~~~A~~~A~~~~~~~i~~ 241 (242)
T cd01169 216 ANLAKGLSLEEAVREAKEYVTQAIRN 241 (242)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999988776653
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=141.79 Aligned_cols=150 Identities=20% Similarity=0.172 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHH-hCCCeEEEeCCch--hH----HHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHH
Q 020650 153 SPDSIQLVAEHAA-ANNKVFMMNLSAP--FI----CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225 (323)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~d~~~~--~~----~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~ 225 (323)
+.+....+++.++ ..+.++++||... .| .+...+.++++++++|++++|++|++.+++....+.++++++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g~~~~~~~~~~~~a~~ 160 (253)
T PRK12413 81 NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSGKEIKTLEDMKEAAKK 160 (253)
T ss_pred CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhCcCCCCHHHHHHHHHH
Confidence 3456666666666 3578888997322 11 122445566789999999999999999998654444567788888
Q ss_pred HhcCCccccCCccEEEEeeCCCc-----e-EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHH
Q 020650 226 LSQWPKASEIRKRTAVITQGADP-----V-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299 (323)
Q Consensus 226 l~~~~~~~~~~~~~vvit~G~~G-----~-~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~ 299 (323)
+ .+.|++.+++|.|++| . ++++++.. +.+..+ ...+|++||||+|.|+|+++|.+|+++++|++
T Consensus 161 l------~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~GaGDaf~a~~~~~l~~g~~l~ea~~ 230 (253)
T PRK12413 161 L------YDLGAKAVVIKGGNRLSQKKAIDLFYDGKEF-VILESP---VLEKNNIGAGCTFASSIASQLVKGKSPLEAVK 230 (253)
T ss_pred H------HHcCCCEEEEeCCCCCCCCcceEEEEcCCEE-EEEeec---ccCCCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8 6678999999999864 2 34444443 334333 35789999999999999999999999999999
Q ss_pred HHhHHHHHHhhhc
Q 020650 300 AGCYTSHVIIQRS 312 (323)
Q Consensus 300 ~A~~~Aa~~~~~~ 312 (323)
+|.++....++..
T Consensus 231 ~A~~~~~~~l~~~ 243 (253)
T PRK12413 231 NSKDFVYQAIQQS 243 (253)
T ss_pred HHHHHHHHHHHHH
Confidence 9999988888663
|
|
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=142.93 Aligned_cols=162 Identities=17% Similarity=0.195 Sum_probs=117.8
Q ss_pred cccEEEEeccccccCHHHHHHHHH---HHHhCCCeEEEeCCch----hH---HHHHHHHHHhhcCCCcEEEeCHHHHHHH
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAE---HAAANNKVFMMNLSAP----FI---CEFFKDALEKVLPYMDYIFGNETEARTF 208 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~----~~---~~~~~~~~~~~l~~~dvl~~n~~e~~~l 208 (323)
..|.|.++ +. .+++.+..+.+ .+++.+.++++||... .| .+...+.++++++.+|++++|..|++.|
T Consensus 75 ~~~aik~G-~l--~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L 151 (284)
T PRK07105 75 KFDAIYSG-YL--GSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLL 151 (284)
T ss_pred ccCEEEEC-cC--CCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHH
Confidence 57888764 22 23444444444 4455678899999531 11 2334455678999999999999999999
Q ss_pred HhhcCC----CCCCHHHHHHHHhcCCccccCCccEEEEee-----CCCceEEeeCC--eeeEEeceeCCCCcccCCCCcc
Q 020650 209 SKVQGW----ETDDVEEIALKLSQWPKASEIRKRTAVITQ-----GADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAG 277 (323)
Q Consensus 209 ~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~vvit~-----G~~G~~~~~~~--~~~~~~~~~~~~~~~~d~tGAG 277 (323)
++.... +.++++++++.+ .+.|++.++||. |..|+++++++ ..++.+.+ . ..+|++|||
T Consensus 152 ~g~~~~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~---~-~~~~~~GaG 221 (284)
T PRK07105 152 LDKPYLEKSYSEEEIKQLLRKL------ADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCK---Y-IPAHYPGTG 221 (284)
T ss_pred cCCCcCcCCCCHHHHHHHHHHH------HhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeec---c-cCCCcCChh
Confidence 875321 233566777777 667889999998 66788887643 34444432 2 347999999
Q ss_pred hHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 278 DAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 278 Daf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
|+|.|+|+++|++|+++++|+++|+++....+++..
T Consensus 222 D~f~aa~~~~l~~g~~l~~av~~A~~~~~~~i~~~~ 257 (284)
T PRK07105 222 DIFTSVITGSLLQGDSLPIALDRAVQFIEKGIRATL 257 (284)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988653
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.9e-17 Score=141.40 Aligned_cols=161 Identities=17% Similarity=0.147 Sum_probs=115.3
Q ss_pred ccccEEEEeccccccCHHHHH---HHHHHHHh--CCCeEEEeCCc------hhHHHHHHHHHH-hhcCCCcEEEeCHHHH
Q 020650 138 EKAKYFYIAGFFLTVSPDSIQ---LVAEHAAA--NNKVFMMNLSA------PFICEFFKDALE-KVLPYMDYIFGNETEA 205 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~d~~~------~~~~~~~~~~~~-~~l~~~dvl~~n~~e~ 205 (323)
.+.|.++++-.. +.+... ++++..+. .+.++++||.. .+......+.++ .+++.+|++++|..|+
T Consensus 87 ~~~d~i~~G~l~---s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea 163 (281)
T PRK08176 87 RQLRAVTTGYMG---SASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFEL 163 (281)
T ss_pred ccCCEEEECCCC---CHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHH
Confidence 478998885322 444444 44444332 35678899851 111122334454 5889999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-------eEEeeCCeeeEEeceeCCCCcccCCCCcch
Q 020650 206 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 278 (323)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-------~~~~~~~~~~~~~~~~~~~~~~~d~tGAGD 278 (323)
+.|++....+.++++++++++ .+.|++.++||.|..| ++++++++.+..+ .+ ...+|++|+||
T Consensus 164 ~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~GaGD 233 (281)
T PRK08176 164 EILTGKPCRTLDSAIAAAKSL------LSDTLKWVVITSAAGNEENQEMQVVVVTADSVNVIS-HP---RVDTDLKGTGD 233 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HhcCCCEEEEeeccCCCCCCcEEEEEEeCCceEEEe-cC---ccCCCCCChhH
Confidence 999875433334566778888 6678999999999988 5666666544333 22 24579999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 279 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 279 af~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
+|.|+|++++.+|+++++|+++|+..-...++.
T Consensus 234 ~faa~~~a~l~~g~~l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 234 LFCAELVSGLLKGKALTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988777754
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.9e-17 Score=149.41 Aligned_cols=150 Identities=19% Similarity=0.289 Sum_probs=117.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCc------hhHHHHHHHH-HHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHH
Q 020650 153 SPDSIQLVAEHAAANNKVFMMNLSA------PFICEFFKDA-LEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~~-~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~ 225 (323)
+.+.+..+++.+++++.++++|+.. +.|.....+. .+.+++++|++++|..|++.|++....+.++++++++.
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~ 161 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKY 161 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 5688999999999999999999831 2333222233 35788999999999999999988544344467777787
Q ss_pred HhcCCccc-cCCccEEEEeeCC----Cce-EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHH
Q 020650 226 LSQWPKAS-EIRKRTAVITQGA----DPV-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299 (323)
Q Consensus 226 l~~~~~~~-~~~~~~vvit~G~----~G~-~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~ 299 (323)
+ . ..|++.+++|.|. +|+ +++.++..++++.+ +++++|++||||+|.|+|+++|++|+++++|++
T Consensus 162 L------~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~---~v~~~dt~GAGDaFsAa~aa~l~~G~~l~eAl~ 232 (448)
T PRK08573 162 I------VEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAP---RVESGCTHGTGCSFSAAIAAGLAKGLDPEEAIK 232 (448)
T ss_pred H------HHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEec---CcCCCCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 7 4 3688999999885 344 44566666666653 347899999999999999999999999999999
Q ss_pred HHhHHHHHHhhh
Q 020650 300 AGCYTSHVIIQR 311 (323)
Q Consensus 300 ~A~~~Aa~~~~~ 311 (323)
+|+.+....+++
T Consensus 233 ~A~~~~~~al~~ 244 (448)
T PRK08573 233 TAKKFITMAIKY 244 (448)
T ss_pred HHHHHHHHHHHH
Confidence 999999999983
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=138.12 Aligned_cols=161 Identities=19% Similarity=0.172 Sum_probs=121.1
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCchh------HHHHHHHHHH-hhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAPF------ICEFFKDALE-KVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~------~~~~~~~~~~-~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.+.++- --+.+.+..+.+.+++.+. ++++||.... ...+..+.++ .+++.+|++++|..|++.|++
T Consensus 74 ~~~aikiG~---l~s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~g 150 (270)
T PRK12616 74 GVDAMKTGM---LPTVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLSG 150 (270)
T ss_pred CCCEEEECC---CCCHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHcC
Confidence 357777742 2356788888888888764 5889986411 1122233344 488899999999999999987
Q ss_pred h-cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCce------EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 V-QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~------~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
. ...+.++++++++.+ .+.|++.++||.|..|. +++++++.++++.++ .+..|++||||+|.|+
T Consensus 151 ~~~~~~~~~~~~aa~~l------~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~t~GaGD~fsaa 221 (270)
T PRK12616 151 MGEIKTVEQMKEAAKKI------HELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEM---IDTPYTHGAGCTFSAA 221 (270)
T ss_pred CCCCCCHHHHHHHHHHH------HHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeee---eCCCCCCcHHHHHHHH
Confidence 4 232334567888888 66789999999998762 556666655555433 3678999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
|+++|++|+++++|+++|..+....++.
T Consensus 222 laa~l~~g~~l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 222 VTAELAKGSEVKEAIYAAKEFITAAIKE 249 (270)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988876
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.2e-14 Score=131.60 Aligned_cols=162 Identities=14% Similarity=0.136 Sum_probs=120.6
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCc------hhHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSA------PFICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~------~~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.+.++- ..+.+.+..+++.+++.+.+ +++||.. ........+.+ +.+++.+|++.+|..|++.|++
T Consensus 78 ~~~aik~G~---l~~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L~g 154 (502)
T PLN02898 78 PVDVVKTGM---LPSAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASALLG 154 (502)
T ss_pred CCCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHHhC
Confidence 457777642 22578888999988888774 8899842 11112233334 3688999999999999999986
Q ss_pred hc-CCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc------eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 VQ-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G------~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
.. ..+.+++.++++.+ .+.|++.++||.|..+ .++++++..++++.++ ...+|++|+||+|.|+
T Consensus 155 ~~~~~~~~~~~~~a~~l------~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~---i~~~~t~GaGD~fsaa 225 (502)
T PLN02898 155 GDPLETVADMRSAAKEL------HKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSR---IKTRNTHGTGCTLASC 225 (502)
T ss_pred CCCCCCHHHHHHHHHHH------HhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecce---eCCCCCCchhhhHHHH
Confidence 32 22234567788888 6678899999998753 2556655555555433 3678999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+++|.+|+++++|+++|+.+....+++.
T Consensus 226 iaa~l~~G~~l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 226 IAAELAKGSDMLSAVKVAKRYVETALEYS 254 (502)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999764
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-13 Score=128.90 Aligned_cols=148 Identities=17% Similarity=0.199 Sum_probs=108.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCc------hhHHH----HHHHHH-HhhcCCCcEEEeCHHHHHHHHhhc-CCCCCCHH
Q 020650 153 SPDSIQLVAEHAAANNKVFMMNLSA------PFICE----FFKDAL-EKVLPYMDYIFGNETEARTFSKVQ-GWETDDVE 220 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~----~~~~~~-~~~l~~~dvl~~n~~e~~~l~~~~-~~~~~~~~ 220 (323)
+.+.+..+++.++ +.++++||-. ..+.. ...+.+ +.+++.+|++++|..|++.|++.. ..+.++++
T Consensus 310 s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~L~g~~~~~~~~~~~ 387 (504)
T PTZ00347 310 TARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPEAERILGRKEITGVYEAR 387 (504)
T ss_pred CHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHHHHHHhCCCCCCCHHHHH
Confidence 5778888888775 5678889732 11211 112223 368899999999999999998853 22233566
Q ss_pred HHHHHHhcCCccccCCccEEEEeeCCCc-------eEEeeC--CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC
Q 020650 221 EIALKLSQWPKASEIRKRTAVITQGADP-------VVVAQD--GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291 (323)
Q Consensus 221 ~~~~~l~~~~~~~~~~~~~vvit~G~~G-------~~~~~~--~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g 291 (323)
++++.+ .+.|++.++||.|..| .+++.+ ++.++++.++ +.++|++|+||+|.|+|+++|++|
T Consensus 388 ~aa~~l------~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~---i~~~~~~GaGD~fsaaiaa~la~G 458 (504)
T PTZ00347 388 AAAQAL------AQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANR---IATINTHGTGCTLASAISSFLARG 458 (504)
T ss_pred HHHHHH------HhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeee---ECCCCCCChHHHHHHHHHHHHhCC
Confidence 777888 6678999999999863 344442 3455666543 368899999999999999999999
Q ss_pred CCHHHHHHHHhHHHHHHhhh
Q 020650 292 KPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 292 ~~~~~a~~~A~~~Aa~~~~~ 311 (323)
+++++|+++|.+.-...+.+
T Consensus 459 ~~l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 459 YTVPDAVERAIGYVHEAIVR 478 (504)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 99999999998888777754
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-13 Score=119.67 Aligned_cols=158 Identities=24% Similarity=0.262 Sum_probs=107.1
Q ss_pred EEEEeccccccCHHHHHHHHHHH---HhCC--CeEEEeCCc----hhH-HHHHHHHHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 142 YFYIAGFFLTVSPDSIQLVAEHA---AANN--KVFMMNLSA----PFI-CEFFKDALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 142 ~v~i~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~d~~~----~~~-~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
.+++.|+.+ +.+.+..+++.+ ++.+ +++++||.- ..| .+...+.++.+++++|++++|.+|++.+++.
T Consensus 79 ~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~ll~~~dii~pN~~E~~~L~g~ 156 (296)
T PTZ00344 79 TYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYVKEEVVDAYRELIPYADVITPNQFEASLLSGV 156 (296)
T ss_pred CEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEeCHHHHHHHHHHhhhCCEEeCCHHHHHHHhCC
Confidence 445556543 456656555554 4454 468888532 112 2335566778899999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEe---eCCCc----eEEee--C----CeeeEEeceeCCCCcccCCCCcch
Q 020650 212 QGWETDDVEEIALKLSQWPKASEIRKRTAVIT---QGADP----VVVAQ--D----GKLKKFPVIVLPKDKLVDTNGAGD 278 (323)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit---~G~~G----~~~~~--~----~~~~~~~~~~~~~~~~~d~tGAGD 278 (323)
...+.++..++++.+ .+.|++.++|| .|..| +++.. . ++.+.+.. |+.. ++++||||
T Consensus 157 ~~~~~~~~~~~~~~l------~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~---~~~~-~~~~GaGD 226 (296)
T PTZ00344 157 EVKDLSDALEAIDWF------HEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKV---PYIE-GRYTGTGD 226 (296)
T ss_pred CCCCHHHHHHHHHHH------HHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEec---cccC-CCCCCchH
Confidence 432333456677777 55688999999 55555 44432 1 22344432 2223 57799999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 279 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 279 af~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
+|.|+|++.+.+| ++++|+++|.+.-..+++..
T Consensus 227 ~f~A~~~a~l~~g-~~~~a~~~A~a~~~~~i~~~ 259 (296)
T PTZ00344 227 LFAALLLAFSHQH-PMDLAVGKAMGVLQDIIKAT 259 (296)
T ss_pred HHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888 99999999999888777543
|
|
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-13 Score=118.32 Aligned_cols=162 Identities=17% Similarity=0.071 Sum_probs=113.9
Q ss_pred hhhccccEEEEeccccccCH-HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 135 ALVEKAKYFYIAGFFLTVSP-DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
..+...|++++++ .+.. +.+..+++.+++++.++++|+........... . .+.+..+++.+|..|++.|++...
T Consensus 73 ~~~~~~d~v~ig~---gl~~~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~~~-~-~~~~~~~iltPn~~E~~~L~g~~~ 147 (254)
T cd01171 73 ELLERADAVVIGP---GLGRDEEAAEILEKALAKDKPLVLDADALNLLADEPS-L-IKRYGPVVLTPHPGEFARLLGALV 147 (254)
T ss_pred hhhccCCEEEEec---CCCCCHHHHHHHHHHHhcCCCEEEEcHHHHHhhcChh-h-hccCCCEEECCCHHHHHHHhCCCh
Confidence 3456789999975 2333 78888888888889999999875432111101 0 245678999999999999987542
Q ss_pred CC-CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC
Q 020650 214 WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292 (323)
Q Consensus 214 ~~-~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~ 292 (323)
.+ .++..++++.+ .+.+.. +++..| .+.+++++++.+++... ....++++|+||+|.|.+.+.+.+|+
T Consensus 148 ~~~~~~~~~~a~~l------~~~~~~-~vvlkG-~~~~i~~~~~~~~~~~~---~~~~~~~~GaGD~lag~iaa~la~g~ 216 (254)
T cd01171 148 EEIQADRLAAAREA------AAKLGA-TVVLKG-AVTVIADPDGRVYVNPT---GNPGLATGGSGDVLAGIIAALLAQGL 216 (254)
T ss_pred hhhhhHHHHHHHHH------HHHcCc-EEEEcC-CCCEEECCCCcEEEECC---CCcccccCchHHHHHHHHHHHHHcCC
Confidence 22 12445667777 444444 555567 45666665444445433 33688999999999888888888999
Q ss_pred CHHHHHHHHhHHHHHHhhhc
Q 020650 293 PIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 293 ~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++++|+++|+.+.+++.+..
T Consensus 217 ~~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 217 SPLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988753
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=114.09 Aligned_cols=149 Identities=23% Similarity=0.284 Sum_probs=120.0
Q ss_pred CHHHHHHHHHHHHhCC-CeEEEeC------CchhHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHhh-cCCCCCCHHHHH
Q 020650 153 SPDSIQLVAEHAAANN-KVFMMNL------SAPFICEFFKDAL-EKVLPYMDYIFGNETEARTFSKV-QGWETDDVEEIA 223 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~d~------~~~~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~~-~~~~~~~~~~~~ 223 (323)
+.+.+..+.+..++++ .++++|| +.+...++..+.+ ++++|.++++.+|..|++.|++. ...+.+++++++
T Consensus 83 ~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g~~~i~~~~d~~~a~ 162 (263)
T COG0351 83 SAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSGLPKIKTEEDMKEAA 162 (263)
T ss_pred CHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcCCCccCCHHHHHHHH
Confidence 5789999999999998 6788998 2233334444444 48999999999999999999994 555667888888
Q ss_pred HHHhcCCccccCCccEEEEeeCCCc----eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHH
Q 020650 224 LKLSQWPKASEIRKRTAVITQGADP----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299 (323)
Q Consensus 224 ~~l~~~~~~~~~~~~~vvit~G~~G----~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~ 299 (323)
+.+ .+.|++.++|+-|... -++|+++..+.+..+ ..+-.++.|+|++|.|++.+.|.+|.++++|++
T Consensus 163 ~~i------~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~---ri~t~~tHGTGCTlSaAIaa~LA~G~~l~~AV~ 233 (263)
T COG0351 163 KLL------HELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAP---RIPTKNTHGTGCTLSAAIAANLAKGLSLEEAVK 233 (263)
T ss_pred HHH------HHhCCCEEEEcCCCCCCCceeEEEcCCceEEEecc---ccCCCCCCCccHHHHHHHHHHHHcCCCHHHHHH
Confidence 888 6789999999987744 245666666666543 346788999999999999999999999999999
Q ss_pred HHhHHHHHHhh
Q 020650 300 AGCYTSHVIIQ 310 (323)
Q Consensus 300 ~A~~~Aa~~~~ 310 (323)
.|-..-..+++
T Consensus 234 ~Ak~fv~~AI~ 244 (263)
T COG0351 234 KAKEFVTRAIR 244 (263)
T ss_pred HHHHHHHHHHh
Confidence 99999888887
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=116.57 Aligned_cols=161 Identities=20% Similarity=0.222 Sum_probs=116.1
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCch------hHHHHHHHHHHh-hcCCCcEEEeCHHHHHHHHhh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP------FICEFFKDALEK-VLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~~~-~l~~~dvl~~n~~e~~~l~~~ 211 (323)
..+.+.++- --+.+.+..+.+..++.+.++++||--. ...++..+.+++ +++.+|++.+|..|++.|++.
T Consensus 60 ~~~aikiG~---l~~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~g~ 136 (246)
T PF08543_consen 60 KFDAIKIGY---LGSAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLTGR 136 (246)
T ss_dssp C-SEEEE-S----SSHHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHHTS
T ss_pred cccEEEEcc---cCCchhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHhCC
Confidence 678888753 2356777888888877778888988321 123344555554 999999999999999999985
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC----c---eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHH
Q 020650 212 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD----P---VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 284 (323)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~----G---~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~ 284 (323)
...+.+++.++++.+ .+.|++.|+||-+.. + -+++++++.+.+..+.. ...+..|.||+|.|.+
T Consensus 137 ~i~~~~~~~~~~~~l------~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~GTGd~fss~l 207 (246)
T PF08543_consen 137 EINSEEDIEEAAKAL------LALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRI---PTGSFHGTGDLFSSAL 207 (246)
T ss_dssp --SSHHHHHHHHHHH------HHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEE---CTSGCTTHHHHHHHHH
T ss_pred CCCChHhHHHHHHHH------HHhCCceEEEeeeccccccccccceeeeccceeecceeEE---cCCCCCCchhHHHHHH
Confidence 555556788888998 678999999998763 2 23456666666665443 3468899999999999
Q ss_pred HHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 285 LSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 285 ~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
++.|.+|+++++|++.|...-...+.+
T Consensus 208 aa~l~~g~~l~~Av~~A~~~v~~~i~~ 234 (246)
T PF08543_consen 208 AAFLAKGYSLEEAVEKAKNFVRRAIKN 234 (246)
T ss_dssp HHHHHTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888877763
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.8e-13 Score=118.18 Aligned_cols=247 Identities=18% Similarity=0.228 Sum_probs=162.6
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++-+++|...+|....++. --+.+............||.+.|.|-++++ +| .++.+++.+|+|..+++.+.
T Consensus 341 ~KPv~vGa~i~D~~~k~d~--d~K~dG~sy~~~~~Qa~GGVarN~A~a~~~-lg--~d~~liSavG~d~n~~~~~~---- 411 (614)
T KOG3009|consen 341 RKPVSVGATIVDFEAKTDE--DVKDDGGSYNGQVVQAMGGVARNHADALAR-LG--CDSVLISAVGDDNNGHFFRQ---- 411 (614)
T ss_pred cCceeecceEEEeEEeecc--cccccCCcccchhhhhccchhhhHHHHHHH-hc--CCeeEEEEeccCCcchhhhh----
Confidence 4559999999999999887 334444455556778899999999999997 56 99999999999931111100
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 164 (323)
.+.+-++ .-+.+..++++++++ ++++.....+++ +
T Consensus 412 --------------------------------------~~~~~~e---~~~dl~~a~~I~~Ds---NiS~~~Ma~il~-a 446 (614)
T KOG3009|consen 412 --------------------------------------NSHKIVE---SNEDLLSADFILLDS---NISVPVMARILE-A 446 (614)
T ss_pred --------------------------------------hhhhhhh---hhhhhhcCCEEEEcC---CCCHHHHHHHHH-h
Confidence 0000011 012233899999986 688888889998 8
Q ss_pred HhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcC--CCC------CCHHHHHHHHhcCCccccC
Q 020650 165 AANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQG--WET------DDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~--~~~------~~~~~~~~~l~~~~~~~~~ 235 (323)
+.+..++.|+|-+... ....++.++. .++.+.+|..|+-......- ++. +...+.++.... ....
T Consensus 447 k~~k~~V~fEPTd~~k---~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~~~~~~~~~~~---k~~~ 520 (614)
T KOG3009|consen 447 KKHKKQVWFEPTDIDK---VKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADGVLELIEKEKT---KLLL 520 (614)
T ss_pred hhccCceEecCCCchh---hhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchHHHHHHHHHHH---Hhhc
Confidence 8999999999976432 1222333332 46888899999843322111 111 112222222211 1334
Q ss_pred CccEEEEeeCCCceEEeeCC--eeeEEeceeCC--CCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 236 RKRTAVITQGADPVVVAQDG--KLKKFPVIVLP--KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~--~~~~~~~~~~~--~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
....+|+|+..+|+++.-++ ...++...+.+ .-++++..||||+|.+|++.+++++.++.+++.-+..++....+.
T Consensus 521 ~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~v~es~~gg~~~~ralls~ 600 (614)
T KOG3009|consen 521 NTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKTVVESLQGGQECARALLST 600 (614)
T ss_pred ccceEEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcchHhhccccHHHHHHHHhc
Confidence 56789999999999864322 22222222212 347889999999999999999999999999999996665554443
|
|
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.3e-13 Score=129.97 Aligned_cols=160 Identities=13% Similarity=0.175 Sum_probs=116.8
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCc------hhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhc
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSA------PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 212 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~------~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~ 212 (323)
.+.+-++- .-+.+.+..+++.+++. +.++++||.. ..+.+...+.++.+++.+|++.+|..|++.|++..
T Consensus 311 ~~aiKiGm---L~s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~g~~ 387 (755)
T PRK09517 311 VDAVKLGM---LGSADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLCGEA 387 (755)
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHhCCC
Confidence 46666642 23567888888888875 4668899742 12223334446679999999999999999998742
Q ss_pred -CCCCCCHHHHHHHHhcCCccccCCccEEEEeeCC------CceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 213 -GWETDDVEEIALKLSQWPKASEIRKRTAVITQGA------DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 213 -~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~------~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
..+.+++.++++.+ .+.+...++||.|. .++++..++..++++.+ +++.+|++|+||+|.|+|+
T Consensus 388 ~~~~~~d~~~aa~~L------~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~---~v~~~~t~GaGDtfsaaia 458 (755)
T PRK09517 388 PAITMDEAIAQARGF------ARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENP---RVNTTNSHGTGCSLSAALA 458 (755)
T ss_pred CCCCHHHHHHHHHHH------HHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeec---ccCCCCCcChHHHHHHHHH
Confidence 12233566667777 44333479999883 46666655556666644 3478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
++|++|+++++|+++|+..-...+.+
T Consensus 459 a~La~G~sl~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 459 TLIAAGESVEKALEWATRWLNEALRH 484 (755)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988888865
|
|
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=110.61 Aligned_cols=167 Identities=15% Similarity=0.083 Sum_probs=114.3
Q ss_pred hhhhhccccEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 209 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~ 209 (323)
..+.++.+|++++..-.+ +...+.+..+++.+++.+.++++|+....+.....+....++. .+|++.+|..|+..++
T Consensus 43 ~~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~~~ll~~~~~~ilTPN~~Ea~~L~ 122 (242)
T cd01170 43 VEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALA 122 (242)
T ss_pred HHHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHHHHHHhcCCCeEEcCCHHHHHHHh
Confidence 456678899999863111 1112455566667888899999999632221111123345554 4999999999999998
Q ss_pred hhcCCC---------CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHH
Q 020650 210 KVQGWE---------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 280 (323)
Q Consensus 210 ~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf 280 (323)
+..... .+++.++++.+ .+.+...+++| |.... ++++++.++++..+. .+.++.|+||+|
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~aa~~l------~~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~---~~~~v~GtGdtL 191 (242)
T cd01170 123 GLTGLGKGVDSSSSDEEDALELAKAL------ARKYGAVVVVT-GEVDY-ITDGERVVVVKNGHP---LLTKITGTGCLL 191 (242)
T ss_pred CCCCCcCcccCCCcchHHHHHHHHHH------HHHhCCEEEEE-CCCcE-EEECCEEEEEeCCCc---cccCCCchHHHH
Confidence 854321 23567777777 33344468888 66664 556677777764322 446678999999
Q ss_pred HHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 281 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 281 ~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
.|.+...|.+|.++.+|+..|...-+.++.
T Consensus 192 a~aiAa~LA~g~~~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 192 GAVIAAFLAVGDDPLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999877766664
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-12 Score=123.51 Aligned_cols=158 Identities=17% Similarity=0.143 Sum_probs=109.3
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCc------hhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhc
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSA------PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 212 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~------~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~ 212 (323)
.+.+.++- .-+.+.+..+.+..++.. .++++||.- ..+.+...+.++++++.+|++.+|..|++.|++..
T Consensus 99 ~~aikiG~---l~s~~~i~~v~~~l~~~~~~~vVlDPv~~~~~G~~l~~~~~~~~~~~Ll~~advItPN~~Ea~~Ltg~~ 175 (530)
T PRK14713 99 VDAVKIGM---LGDAEVIDAVRTWLAEHRPPVVVLDPVMVATSGDRLLEEDAEAALRELVPRADLITPNLPELAVLLGEP 175 (530)
T ss_pred CCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEECCcccCCCCCCCCCHHHHHHHHHHhhhhheecCChHHHHHHhCCC
Confidence 56677642 124566666666665543 347888832 22334455667789999999999999999998743
Q ss_pred C-CCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-----eEEe-eCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 213 G-WETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 213 ~-~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-----~~~~-~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
. .+.+++.++++.+ ...+.+.++||.|..+ ..++ .+++.++++.. +++.+|++|+||+|.|+|+
T Consensus 176 ~~~~~~d~~~aa~~L------~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~---~v~~~~t~GaGD~fsaala 246 (530)
T PRK14713 176 PATTWEEALAQARRL------AAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGP---RVDTRNTHGTGCSLSSALA 246 (530)
T ss_pred CCCCHHHHHHHHHHH------HHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeee---eeCCCCCCcHHHHHHHHHH
Confidence 2 1234455667777 4334468999988642 3344 34445666543 3467899999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
++|++|+++++|+++|+..-...+
T Consensus 247 a~La~G~~l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 247 TRLGRGGDWAAALRWATAWLHGAI 270 (530)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998544444
|
|
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.3e-11 Score=106.65 Aligned_cols=161 Identities=16% Similarity=0.084 Sum_probs=110.9
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
+.+...|++++++-. .+.+.+..+++.+++.+.++++|+....+ .+.........+++.+|..|++.|++....
T Consensus 88 ~~~~~~davvig~Gl--~~~~~~~~l~~~~~~~~~pvVlDa~g~~l----~~~~~~~~~~~~vItPN~~El~~L~g~~~~ 161 (272)
T TIGR00196 88 ELLERYDVVVIGPGL--GQDPSFKKAVEEVLELDKPVVLDADALNL----LTYDKPKREGEVILTPHPGEFKRLLGLVNE 161 (272)
T ss_pred hhhccCCEEEEcCCC--CCCHHHHHHHHHHHhcCCCEEEEhHHHHH----HhhcccccCCCEEECCCHHHHHHHhCCchh
Confidence 445788999997632 12344778888888889999999865432 111111134689999999999999885443
Q ss_pred CCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCH
Q 020650 215 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 294 (323)
Q Consensus 215 ~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~ 294 (323)
+.++..++++++ .+. ...++++.|..++++..++..+..+ . +....+++|+||++.|.+.+.+.+|.++
T Consensus 162 ~~~~~~~aa~~l------~~~-~~~vVv~kG~~~~i~~~~~~~~~~~-~---~~~~~~~~GaGD~lag~iaa~la~g~~~ 230 (272)
T TIGR00196 162 IQGDRLEAAQDI------AQK-LQAVVVLKGAADVIAAPDGDLWINK-T---GNAALAKGGTGDVLAGLIGGLLAQNLDP 230 (272)
T ss_pred hhhhHHHHHHHH------HHH-hCCEEEEcCCCCEEEcCCCeEEEEC-C---CCCccCCCCchHHHHHHHHHHHhCCCCH
Confidence 445677777777 333 2347778899998765444444433 2 2356889999999666666666699999
Q ss_pred HHHHHHH---hHHHHHHhhhc
Q 020650 295 EECVRAG---CYTSHVIIQRS 312 (323)
Q Consensus 295 ~~a~~~A---~~~Aa~~~~~~ 312 (323)
.+|+..| +..|+..+.+.
T Consensus 231 ~~A~~~a~~~~~~a~~~~~~~ 251 (272)
T TIGR00196 231 FDAACNAAFAHGLAGDLALKN 251 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 9999777 77777766443
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.5e-12 Score=109.69 Aligned_cols=162 Identities=13% Similarity=0.105 Sum_probs=105.5
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCch----hH-HHHHHHHHH-hhcCCCcEEEeCHHHHHHHHhh
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAP----FI-CEFFKDALE-KVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~----~~-~~~~~~~~~-~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
.+.+.++-....-..+.+.++++.+++ .+..+++||... .+ .+...+.++ .+++.+|++++|..|++.|++.
T Consensus 87 ~~ai~~G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adiitPN~~Ea~~L~g~ 166 (308)
T PLN02978 87 YTHLLTGYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVPLATMLTPNQFEAEQLTGI 166 (308)
T ss_pred cCEEEecccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHhhCCeeccCHHHHHHHhCC
Confidence 566665421111112456666676665 346688888521 11 122344454 5899999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCC-CceEE-ee--C------CeeeEEeceeCCCCcccCCCCcchHHH
Q 020650 212 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA-DPVVV-AQ--D------GKLKKFPVIVLPKDKLVDTNGAGDAFV 281 (323)
Q Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~-~G~~~-~~--~------~~~~~~~~~~~~~~~~~d~tGAGDaf~ 281 (323)
...+.+++.++++.+ ...|++.++||.+. .|... .. . ++.+++..+.. ... ++|+||+|.
T Consensus 167 ~~~~~~~~~~a~~~l------~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~-~~GtGD~fs 236 (308)
T PLN02978 167 RIVTEEDAREACAIL------HAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKI---PAY-FTGTGDLMA 236 (308)
T ss_pred CCCCHHHHHHHHHHH------HHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCC---CCC-CCCchHHHH
Confidence 332233566777777 56788999987644 34332 11 1 23445543332 333 589999999
Q ss_pred HHHHHHhhcC-CCHHHHHHHHhHHHHHHhhh
Q 020650 282 GGFLSQLVQE-KPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 282 ag~~~~l~~g-~~~~~a~~~A~~~Aa~~~~~ 311 (323)
|.+++.+.+| .++++|+++|...-...++.
T Consensus 237 A~laa~l~~g~~~l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 237 ALLLGWSHKYPDNLDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 9888888888 79999999998887766654
|
|
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.3e-10 Score=95.97 Aligned_cols=161 Identities=16% Similarity=0.178 Sum_probs=111.3
Q ss_pred hhccccEEEEeccccccCH---HHHHHHHHHHHhCCCe--EEEeCCc-----hhHHHHHHHHH-HhhcCCCcEEEeCHHH
Q 020650 136 LVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKV--FMMNLSA-----PFICEFFKDAL-EKVLPYMDYIFGNETE 204 (323)
Q Consensus 136 ~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~d~~~-----~~~~~~~~~~~-~~~l~~~dvl~~n~~e 204 (323)
.+..+|.|+. ||.. +. +.+..+++..|+.+.. ..+||-. -....+..+.+ +++++.+|++.+|.-|
T Consensus 70 ~~~~~davlt-GYlg--s~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fE 146 (281)
T COG2240 70 KLGECDAVLT-GYLG--SAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFE 146 (281)
T ss_pred cccccCEEEE-ccCC--CHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHH
Confidence 4667888775 4432 33 3455566666655433 6667621 11122334434 3799999999999999
Q ss_pred HHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC-----ceEEeeCCe---eeEEeceeCCCCcccCCCCc
Q 020650 205 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-----PVVVAQDGK---LKKFPVIVLPKDKLVDTNGA 276 (323)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~-----G~~~~~~~~---~~~~~~~~~~~~~~~d~tGA 276 (323)
++.|++....+.++..++++.+ ...|++.++||.-.. |.+++.... ..++. +.+ ..+++|.
T Consensus 147 Le~Ltg~~~~~~~da~~aa~~L------~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v----~~~~~Gt 215 (281)
T COG2240 147 LEILTGKPLNTLDDAVKAARKL------GADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLV----PFIPNGT 215 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHH------hhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcC----CCCCCCc
Confidence 9999998766667788888888 667899999995433 445544332 22221 122 3459999
Q ss_pred chHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 277 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 277 GDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
||.|.|-|++.+++|.+.++|+..+...-...++
T Consensus 216 GDL~sallla~lL~g~~~~~al~~~~~~V~evl~ 249 (281)
T COG2240 216 GDLFSALLLARLLEGLSLTQALERATAAVYEVLQ 249 (281)
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887666654
|
|
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.6e-10 Score=97.54 Aligned_cols=160 Identities=13% Similarity=0.094 Sum_probs=107.6
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhCC------CeEEEeCCc------hhHH-HHHHHH-HHhhcCCCcEEEeCHHHH
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAANN------KVFMMNLSA------PFIC-EFFKDA-LEKVLPYMDYIFGNETEA 205 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~------~~~~-~~~~~~-~~~~l~~~dvl~~n~~e~ 205 (323)
.+.+=++ +.-+.+.+..+.+..++++ .++++||-- .... ....+. .+.+++.++++.+|..|+
T Consensus 74 i~aIKiG---mL~s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~Ea 150 (321)
T PTZ00493 74 IDVVKLG---VLYSKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYEC 150 (321)
T ss_pred CCEEEEC---CcCCHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHHHH
Confidence 4666654 1225677777777776542 248888831 1112 122232 356999999999999999
Q ss_pred HHHHhh----cCCCCCCHHHHHHHHhcCCcccc-CCccEEEEeeCCCc----------e--EEeeC--------------
Q 020650 206 RTFSKV----QGWETDDVEEIALKLSQWPKASE-IRKRTAVITQGADP----------V--VVAQD-------------- 254 (323)
Q Consensus 206 ~~l~~~----~~~~~~~~~~~~~~l~~~~~~~~-~~~~~vvit~G~~G----------~--~~~~~-------------- 254 (323)
+.|.+. ...+.++++++++.+ .. .|++.|+||-|... + +++.+
T Consensus 151 ~~L~g~~~~~~~~~~~~~~~aA~~l------~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~ 224 (321)
T PTZ00493 151 KVILEALDCQMDLSKANMTELCKLV------TEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQID 224 (321)
T ss_pred HHHhCCCcccCCCCHHHHHHHHHHH------HHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccc
Confidence 999871 112344677888888 44 58999999977632 1 23321
Q ss_pred -C------eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 255 -G------KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 255 -~------~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
+ +.+.+.. +.....++.|.||+|.+++++.|++|+++++|++.|...-..++..
T Consensus 225 ~~~~~~~~~~~~~~~---~ri~~~~~hGTGc~fASAIAa~LA~G~~l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 225 AGGVTYLYDVYKLRS---KRKPGKDIHGTGCTLSTAIACYLAKKHNILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccccccceEEEEEe---cccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 1 1223332 3334467899999999999999999999999999999888777765
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.2e-09 Score=90.99 Aligned_cols=164 Identities=15% Similarity=0.095 Sum_probs=107.0
Q ss_pred hhhhhccccEEEEeccccccCHHH---HHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSPDS---IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEART 207 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~ 207 (323)
..+....++.+++.. . ....+. +..+++.++++++++++|+..........+..+.+++ ..+++.+|..|+..
T Consensus 48 ~~~~~~~~~alvi~~-G-~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~~vItPN~~E~~~ 125 (263)
T PRK09355 48 AEEMAKIAGALVINI-G-TLTEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFALELLAEVKPAVIRGNASEIAA 125 (263)
T ss_pred HHHHHHhcCceEEeC-C-CCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcchhhHHHHHHHHHhcCCcEecCCHHHHHH
Confidence 445567888888853 2 123332 4455566788899999999653221112222333443 67999999999999
Q ss_pred HHhhcC----CC----CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 208 FSKVQG----WE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 208 l~~~~~----~~----~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
|++... .+ .++..+.++.+ .......+++| |..- +++++++.+.+.... ....+.+|+||+
T Consensus 126 L~g~~~~~~~vd~~~~~~~~~~~a~~l------a~~~~~~Vvvk-G~~d-~I~~~~~~~~~~~g~---~~~~~v~GtGc~ 194 (263)
T PRK09355 126 LAGEAAETKGVDSTDGSADAVEIAKAA------AKKYGTVVVVT-GEVD-YITDGERVVSVHNGH---PLMTKVTGTGCL 194 (263)
T ss_pred HhCCCcccCCcCCCCCHHHHHHHHHHH------HHHhCCEEEEE-CCCc-EEEeCCEEEEEeCCC---cccCCcccccHH
Confidence 987532 11 12456677777 44444568888 4443 445566665555211 145566999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
+.|.+...|..|.++.+|+..|...-+.+.
T Consensus 195 L~~~iaa~lA~g~~~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 195 LSAVVAAFAAVEKDYLEAAAAACAVYGIAG 224 (263)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999998887665554
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-08 Score=84.88 Aligned_cols=164 Identities=14% Similarity=0.071 Sum_probs=104.6
Q ss_pred hhhhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEART 207 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~ 207 (323)
..+.+..++.+.+..-. ... +.+..+++.++++++++++||..........+..+.+++ ..+++.+|..|++.
T Consensus 43 ~~~~~~~~~al~ik~G~--l~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~~r~~~~~~Ll~~~~~~vITpN~~E~~~ 120 (249)
T TIGR00694 43 VAELAKIAGALVINIGT--LDKESIEAMIAAGKSANELGVPVVLDPVGVGATKFRTETALELLSEGRFAAIRGNAGEIAS 120 (249)
T ss_pred HHHHHHHcCceEEeCCC--CCHHHHHHHHHHHHHHHhcCCCEEEcccccccchhHHHHHHHHHhhcCCceeCCCHHHHHH
Confidence 44556778888876422 233 345555666777889999999643322212233345665 47999999999999
Q ss_pred HHhhc----CCC----CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 208 FSKVQ----GWE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 208 l~~~~----~~~----~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
|++.. +.+ .++..++++.+ .......+++| |..- +++++++.+.+.... + ..-..+|.||+
T Consensus 121 L~g~~~~~~gvd~~~~~~d~~~~a~~l------a~~~~~~Vllk-G~~D-~i~~~~~~~~~~~g~-~--~~~~~~GtGc~ 189 (249)
T TIGR00694 121 LAGETGLMKGVDSGEGAADAIRAAQQA------AQKYGTVVVIT-GEVD-YVSDGTSVYTIHNGT-E--LLGKITGSGCL 189 (249)
T ss_pred HhCCCCCCCCcCCccchHHHHHHHHHH------HHHhCCEEEEE-CCCc-EEEeCCEEEEECCCC-h--HHhCCccchHH
Confidence 98743 211 23456677777 33333467776 4433 455666655543211 1 12224799999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
+.+.+.+.|..|.++.+|+..|...-..+.
T Consensus 190 LssaIaa~LA~g~~~~~A~~~A~~~~~~a~ 219 (249)
T TIGR00694 190 LGSVVAAFCAVEEDPLDAAISACLLYKIAG 219 (249)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999998875544444
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=98.49 E-value=2e-06 Score=75.56 Aligned_cols=161 Identities=17% Similarity=0.219 Sum_probs=108.6
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCC-----c-hhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLS-----A-PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~-----~-~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
++++=.+ +.-+++...-+.+.+++.++ ++++|+- . .... +...-..+++++++|++.+|..|+-.|.+.
T Consensus 93 C~VvKTG---ML~~~~I~~vi~q~l~~~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll~~ 169 (523)
T KOG2598|consen 93 CDVVKTG---MLPSPEIVKVIEQSLQKFNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILLKK 169 (523)
T ss_pred ccEEeec---CcCchHHHHHHHHHHHhhcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHHhh
Confidence 4555543 11234444444455555554 3777771 1 1111 123344678999999999999999999874
Q ss_pred cCCC------CCCHHHHHHHHhcCCccccCCccEEEEeeCCCc----------------e-EEeeCCeeeEEeceeCCCC
Q 020650 212 QGWE------TDDVEEIALKLSQWPKASEIRKRTAVITQGADP----------------V-VVAQDGKLKKFPVIVLPKD 268 (323)
Q Consensus 212 ~~~~------~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G----------------~-~~~~~~~~~~~~~~~~~~~ 268 (323)
...+ ..+++..++.+ .+.|+|.++++.|.-. + ++|++.+++.++.+ ..
T Consensus 170 ~~~~~~~i~~v~di~~~~~~i------hk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~---~~ 240 (523)
T KOG2598|consen 170 EKREISKIQSVFDIAKDAAKI------HKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSP---YL 240 (523)
T ss_pred cccCCcccccHHHHHHHHHHH------HhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEeccc---cc
Confidence 3222 23456667777 7789999999976522 1 24566666666543 34
Q ss_pred cccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 269 KLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 269 ~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
.-..+.|.|-+..++++..|++|.++.+|++.|...--.+++..
T Consensus 241 ~t~~tHGtgCtLaSAIASnLA~g~sl~qAv~~ai~yvq~Ai~~s 284 (523)
T KOG2598|consen 241 ATKHTHGTGCTLASAIASNLARGYSLLQAVQGAIEYVQNAIAIS 284 (523)
T ss_pred ccccccCccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhc
Confidence 67889999999999999999999999999999987766666543
|
|
| >KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.6e-06 Score=70.40 Aligned_cols=156 Identities=19% Similarity=0.214 Sum_probs=97.2
Q ss_pred ccccEEEEeccccccC-HHHHHHHHHHHHhCCC--eEEEeCC-----chhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHH
Q 020650 138 EKAKYFYIAGFFLTVS-PDSIQLVAEHAAANNK--VFMMNLS-----APFICEFFKDALEKVL-PYMDYIFGNETEARTF 208 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~d~~-----~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l 208 (323)
...+.+. +||.++.+ ...+..+....|+.+. ..++||- .....++.....++++ +.+|++.+|.-|++.|
T Consensus 80 ~~Y~~vL-TGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~EiL 158 (308)
T KOG2599|consen 80 NKYDAVL-TGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEIL 158 (308)
T ss_pred cccceee-eeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhhh
Confidence 3456554 56665443 2455666666666553 3566762 1122233444444544 5699999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC----ce-EE---eeCC-eeeEEeceeCCCCcccCCCCcchH
Q 020650 209 SKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD----PV-VV---AQDG-KLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~----G~-~~---~~~~-~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
+|....+.++..++.+++ +..+++.+|||...- |. ++ ++.+ +.+++. +|.+ .---||.||.
T Consensus 159 tg~~I~t~eda~~a~~~l------hq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~---ipki-~~~FtGTGDL 228 (308)
T KOG2599|consen 159 TGMEIRTEEDAKRAVEKL------HQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYL---IPKI-DGVFTGTGDL 228 (308)
T ss_pred cCCeeccHHHHHHHHHHH------HHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEE---eccc-ceEEecccHH
Confidence 998887788899999999 667899999996443 31 22 1222 333333 2211 1224799999
Q ss_pred HHHHHHHHhhcC---CCHHHHHHHHhHH
Q 020650 280 FVGGFLSQLVQE---KPIEECVRAGCYT 304 (323)
Q Consensus 280 f~ag~~~~l~~g---~~~~~a~~~A~~~ 304 (323)
|.|-+++-+..- .++..|++.+...
T Consensus 229 fsaLLla~~~~~~~~~~l~~a~e~~ls~ 256 (308)
T KOG2599|consen 229 FSALLLAWLHESPDNDDLSKAVEQVLSS 256 (308)
T ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHH
Confidence 998888777665 4566666655443
|
|
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00063 Score=57.09 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=98.1
Q ss_pred hhhhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc--CCCcEEEeCHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL--PYMDYIFGNETEART 207 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~e~~~ 207 (323)
..+..+.++.++++=- .+++ +......+.+++.++|+++||-..-..+...+..++++ .+.++++.|..|...
T Consensus 43 ~~e~~~~a~al~iNiG--Tl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGas~~R~~~~~~LL~~~~~~vIrGN~sEI~a 120 (246)
T PF02110_consen 43 VEEFASIADALVINIG--TLTDERIEAMKKAAKAANELGIPVVLDPVGVGASKFRTEFALELLNNYKPTVIRGNASEIAA 120 (246)
T ss_dssp HHHHHHCTSEEEEEST--TSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHHHHHHCHS--SEEEEEHHHHHH
T ss_pred HHHHHHHcCEEEEECC--CCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCCcHHHHHHHHHHHHhCCCcEEEeCHHHHHH
Confidence 4566677888888632 2333 45667778888999999999954333333455567777 478999999999999
Q ss_pred HHhhc----CCCCC----CHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 208 FSKVQ----GWETD----DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 208 l~~~~----~~~~~----~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
|.+.. |.+.. +..+.++.+. .+-...+++| |+.-.+ .++.+.+.++.-. .-.-.-||.|+.
T Consensus 121 Lag~~~~~kGVDs~~~~~~~~~~a~~lA------~k~~~vVvvT-G~~D~I-sdg~~~~~i~nG~---~~l~~itGtGC~ 189 (246)
T PF02110_consen 121 LAGEDSKAKGVDSGDSDEDAIEAAKQLA------QKYNCVVVVT-GEVDYI-SDGNRVYRIPNGS---PLLSKITGTGCM 189 (246)
T ss_dssp HHTCCCCSCSSSSSCGSHHHHHHHHHHH------HHTTSEEEEE-SSSEEE-EESSCEEEECSSS---GGGGGSTTHHHH
T ss_pred HhCcCCCCCCcCcCCcchHHHHHHHHHH------HhcCCEEEEe-cCCcEE-ECCCeEEEeCCCC---hHhcceeccchH
Confidence 98753 22221 1346666663 2223345555 655544 3566666654321 145567999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
..+-+.+.+.-..++.++...|..+
T Consensus 190 lgaliaaf~av~~d~~~aa~~a~~~ 214 (246)
T PF02110_consen 190 LGALIAAFLAVAEDPLEAAVAAVAL 214 (246)
T ss_dssp HHHHHHHHHCCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccchHHHHHHHHH
Confidence 8887777777767776666555443
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0015 Score=59.69 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=48.4
Q ss_pred cccEEEEeccccccC--------H---HHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHH
Q 020650 139 KAKYFYIAGFFLTVS--------P---DSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEA 205 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~--------~---~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~ 205 (323)
.+|.++++|++..-. . +-+.+.++..++ .++++-+.+.+..-.......+..+++.+|.+=+|++|+
T Consensus 222 ~~D~avlSG~q~i~~~y~dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As~~~~~ir~~i~~~ilp~vDSlGmNE~EL 301 (463)
T PRK03979 222 MVDGAILSGYQGIKEEYSDGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFASIQNREIRKKIITYILPHVDSVGMDETEI 301 (463)
T ss_pred CCCEEEEechhhhhccccccccHHHHHHHHHHHHHHHhhCCCCceEEEEeccccCHHHHHHHHHhhccccccccCCHHHH
Confidence 499999999984322 1 122333333433 346676776543322334455668899999999999999
Q ss_pred HHHHhhcCC
Q 020650 206 RTFSKVQGW 214 (323)
Q Consensus 206 ~~l~~~~~~ 214 (323)
..+....+.
T Consensus 302 a~l~~~lg~ 310 (463)
T PRK03979 302 ANILNVLGY 310 (463)
T ss_pred HHHHHHhcC
Confidence 988766554
|
|
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00043 Score=58.49 Aligned_cols=159 Identities=18% Similarity=0.102 Sum_probs=98.0
Q ss_pred hhhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 134 WALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 134 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
.+.+++.|.+.+++ .+.... ...++++...+...++++|-..-... .........--|+.++..|+..|++...
T Consensus 62 ~~~~~~~~av~iGP-Glg~~~-~~~~~~~~~~~~~~p~VlDADaL~~l----~~~~~~~~~~~IlTPH~gE~~rL~~~~~ 135 (242)
T PF01256_consen 62 LELLEKADAVVIGP-GLGRDE-ETEELLEELLESDKPLVLDADALNLL----AENPKKRNAPVILTPHPGEFARLLGKSV 135 (242)
T ss_dssp HHHHCH-SEEEE-T-T-SSSH-HHHHHHHHHHHHCSTEEEECHHHHCH----HHCCCCSSSCEEEE-BHHHHHHHHTTTC
T ss_pred HhhhccCCEEEeec-CCCCch-hhHHHHHHHHhhcceEEEehHHHHHH----HhccccCCCCEEECCCHHHHHHHhCCcc
Confidence 34577899999975 233333 33445555555666788998643321 1000223445566699999999998654
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCC
Q 020650 214 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 293 (323)
Q Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~ 293 (323)
...++..+.++.+. ...+ . +++-.|..-.+...+++.+..+.-. .-.-+-|.||.+++-+..-+.++.+
T Consensus 136 ~~~~~~~~~a~~~a-----~~~~-~-~vvLKG~~t~I~~p~~~~~~n~~gn----~~la~gGsGDvLaGii~~llaq~~~ 204 (242)
T PF01256_consen 136 EIQEDRIEAAREFA-----KEYG-A-VVVLKGAVTIIASPGGRVYVNPTGN----PGLATGGSGDVLAGIIAGLLAQGYD 204 (242)
T ss_dssp HHCCSHHHHHHHHH-----HHHT-S-EEEEESTSSEEEEETSEEEEE--------GGGSSTTHHHHHHHHHHHHHHHTSS
T ss_pred cchhhHHHHHHHHH-----hhcC-c-EEEEeCCCcEEEecCcceeEeCCCC----CCCCCCCcccHHHHHHHHHHHccCC
Confidence 32456667777663 1222 2 4445577666665566666655321 4577889999999888888899999
Q ss_pred HHHHHHHHhHHHHHHh
Q 020650 294 IEECVRAGCYTSHVII 309 (323)
Q Consensus 294 ~~~a~~~A~~~Aa~~~ 309 (323)
+.+|...|+.+=+.+-
T Consensus 205 ~~~Aa~~av~lHg~Ag 220 (242)
T PF01256_consen 205 PFEAACLAVYLHGRAG 220 (242)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998876655443
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0014 Score=59.57 Aligned_cols=172 Identities=15% Similarity=0.017 Sum_probs=90.9
Q ss_pred CCceeecCchHHHHHHHHHHhcCCCCcEEE-EeeeecCchhHHHHHHHHHcCceeEEee------c-------CCCCcee
Q 020650 36 YNVEYIAGGATQNSIRVAQWMLQIPGATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYE------D-------ESASTGT 101 (323)
Q Consensus 36 ~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~-~~~vG~D~~g~~i~~~l~~~gi~~~~~~------~-------~~~~t~~ 101 (323)
.....+.||.+.-+|..+++ +| .++.+ .++. .++..++.+.+.+|-.-.+. . ...+...
T Consensus 84 ~~~~~rmGGnAgimAn~la~-lg--~~~Vi~~~~~----lsk~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~d~I 156 (453)
T PRK14039 84 DNSEIRMGGNAGIMANVLSE-LG--ASRVVPNVAV----PSKTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQEPI 156 (453)
T ss_pred cCceEEeCChHHHHHHHHHh-cC--CceEEEcCCC----CCHHHHHhcCCCCEEeccccccccccCccccccccCCCCCc
Confidence 45678999999999988886 45 77544 3321 23344455533333222110 0 0111222
Q ss_pred -EEEEEeCCccce-----eecccccccCC---c--ccCCC-cchhhhhc----cccEEEEeccccccC--------HHHH
Q 020650 102 -CAVCVVGGERSL-----VANLSAANCYK---S--EHLKK-PENWALVE----KAKYFYIAGFFLTVS--------PDSI 157 (323)
Q Consensus 102 -~~~~~~~g~~~~-----~~~~~~~~~~~---~--~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~--------~~~~ 157 (323)
.++.+..|.+.. +..+.+++-+- + ..+.. +++.+.++ .+|.++++|++.... .+.+
T Consensus 157 H~IfEy~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~e~l 236 (453)
T PRK14039 157 HFVFDFREGETFSLYGTRIRAPRENRFIATFDHLNFRLFINPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYREKL 236 (453)
T ss_pred eEEEEeCCCCEEecCCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHHHHH
Confidence 222233444331 12222222111 1 11111 23334444 689999999984322 2333
Q ss_pred HHHH---HHHHhC--CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 158 QLVA---EHAAAN--NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 158 ~~~~---~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
.+.. +.+++. ++++-+.+.+..-.+.....+..+++.+|.+=+|++|+..+....|.
T Consensus 237 ~~~~~~i~~l~~~~~~i~iH~E~As~~~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~~g~ 298 (453)
T PRK14039 237 EDSLAQLKWWKSKNEKLRIHAELGHFASKEIANSVFLILAGIVDSIGMNEDELAMLANLHGI 298 (453)
T ss_pred HHHHHHHHHHHhcCCCceEEEEecCcccHHHHHHHHHHhhcccccccCCHHHHHHHHHHccc
Confidence 3333 333222 35677777654333335555678999999999999999999887654
|
|
| >KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00063 Score=56.33 Aligned_cols=166 Identities=14% Similarity=0.224 Sum_probs=104.9
Q ss_pred hhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCC-cEEEeCHHHHHHHHh
Q 020650 135 ALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM-DYIFGNETEARTFSK 210 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~-dvl~~n~~e~~~l~~ 210 (323)
..+.+-+.++|++ .+..++ +.+.++++.++.+++++++|...-+......+.+ +-.+. -++.+|.-|+..|++
T Consensus 97 k~L~RlhavVIGP-GLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e~l--~~~~~~viLTPNvvEFkRLcd 173 (306)
T KOG3974|consen 97 KLLQRLHAVVIGP-GLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPERL--IGGYPKVILTPNVVEFKRLCD 173 (306)
T ss_pred HHHhheeEEEECC-CCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchhhh--hccCceeeeCCcHHHHHHHHH
Confidence 3477888888875 455555 4577889999999999999997766544433321 12233 455699999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhh-
Q 020650 211 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV- 289 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~- 289 (323)
....+.++-. .+.+|. ..-....++-.|+.-.++..+.+.+..+. +-...-.-|=||...+.+...+.
T Consensus 174 ~~l~~~d~~~-~~~~L~------~~l~nv~vvqKG~~D~ils~~~ev~~~s~----eGs~kRcGGQGDiLaGsla~fl~w 242 (306)
T KOG3974|consen 174 AELDKVDSHS-QMQHLA------AELMNVTVVQKGESDKILSPDSEVRVCST----EGSLKRCGGQGDILAGSLATFLSW 242 (306)
T ss_pred HhhccccchH-HHHHHH------HHhcCeEEEEecCCceeeCCCCeeEEccC----CCCccccCCCcchhhhHHHHHHHH
Confidence 6443333322 233331 11123466777877775554444443331 23566777899999988776653
Q ss_pred ---cCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 290 ---QEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 290 ---~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
....++++...|..+++..+++-|.
T Consensus 243 ~k~~~~e~~~~~~~a~~a~s~~vr~a~r 270 (306)
T KOG3974|consen 243 AKLLSGEQDSAAFLAAVAGSIMVRRAGR 270 (306)
T ss_pred HHhccCCccchhhhhhhhhHHHHHHHHH
Confidence 2344557788888887777766543
|
|
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00091 Score=62.84 Aligned_cols=154 Identities=19% Similarity=0.099 Sum_probs=91.6
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
+.++.++.+.++. .+..+ +....+++.+++.+.++++|...-.+.....+ .....++.+|..|+..|++....
T Consensus 316 ~~~~~~~a~viGp-Glg~~-~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~~-----~~~~~VLTPh~gE~~rL~~~~~~ 388 (508)
T PRK10565 316 ESLEWADVVVIGP-GLGQQ-EWGKKALQKVENFRKPMLWDADALNLLAINPD-----KRHNRVITPHPGEAARLLGCSVA 388 (508)
T ss_pred HHhhcCCEEEEeC-CCCCC-HHHHHHHHHHHhcCCCEEEEchHHHHHhhCcc-----ccCCeEECCCHHHHHHHhCCChh
Confidence 3456778888864 22223 33345557777778899999976432111110 12246888999999999873211
Q ss_pred CC-CCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC
Q 020650 215 ET-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292 (323)
Q Consensus 215 ~~-~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~ 292 (323)
+. .+..+.++.+ .......+++| |..- ++.++ +..+..+. .. ...-++|.||++.+-+.+.+.++.
T Consensus 389 ~v~~~~~~~a~~~------a~~~~~~vvlK-G~~~-iI~~~~~~~~~~~~-G~---~~ma~~GsGDvLaGiIaalla~g~ 456 (508)
T PRK10565 389 EIESDRLLSARRL------VKRYGGVVVLK-GAGT-VIAAEPDALAIIDV-GN---AGMASGGMGDVLSGIIGALLGQKL 456 (508)
T ss_pred hhhhhHHHHHHHH------HHHhCCEEEEe-CCCc-EEEcCCceEEEECC-CC---CCCCCCChHHHHHHHHHHHHHcCC
Confidence 11 1333455555 22222345554 5443 44444 34444332 11 345669999999998888888999
Q ss_pred CHHHHHHHHhHHHHH
Q 020650 293 PIEECVRAGCYTSHV 307 (323)
Q Consensus 293 ~~~~a~~~A~~~Aa~ 307 (323)
++.+|+..|+.+=++
T Consensus 457 ~~~~Aa~~a~~lhg~ 471 (508)
T PRK10565 457 SPYDAACAGCVAHGA 471 (508)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999988888754333
|
|
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.002 Score=53.67 Aligned_cols=158 Identities=17% Similarity=0.138 Sum_probs=96.5
Q ss_pred hhhhccccEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCC--CcEEEeCHHHHHHHHh
Q 020650 134 WALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY--MDYIFGNETEARTFSK 210 (323)
Q Consensus 134 ~~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~--~dvl~~n~~e~~~l~~ 210 (323)
.+..+-++.+.|+=-++. -..+.....++.+++.+.|+++||-..-......+...++|.+ .+++..|..|...|.+
T Consensus 50 ~e~~kia~AL~INIGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt~~R~~~~~~LL~~~~~~~IrGN~sEI~~Lag 129 (265)
T COG2145 50 EEFAKIADALLINIGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGATKFRTKFALELLAEVKPAAIRGNASEIAALAG 129 (265)
T ss_pred HHHHHhccceEEeeccCChHHHHHHHHHHHHHHhcCCCEEecCccCCchHHHHHHHHHHHHhcCCcEEeccHHHHHHHhc
Confidence 344556677776522221 1135667777888999999999996543333344445667654 6999999999999975
Q ss_pred hc----CCC----CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHH
Q 020650 211 VQ----GWE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282 (323)
Q Consensus 211 ~~----~~~----~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~a 282 (323)
.. |.| ..++.++++.+. ..-...+++| |+.-.+ .++.+.+.+..-. | -.-.-||+|+...|
T Consensus 130 ~~~~~kGVDa~~~~~~~~~~a~~~A------~~~~~vvvvT-G~vD~I-sdg~~~~~i~nG~-p--ll~~ItGtGCllga 198 (265)
T COG2145 130 EAGGGKGVDAGDGAADAIEAAKKAA------QKYGTVVVVT-GEVDYI-SDGTRVVVIHNGS-P--LLGKITGTGCLLGA 198 (265)
T ss_pred ccccccccccccchhhHHHHHHHHH------HHhCcEEEEE-CCeeEE-EcCCeEEEEECCC-c--HHhhhhccccHHHH
Confidence 43 333 234555665552 2222445555 554433 3555555554321 1 45677899998888
Q ss_pred HHHHHhhcCCC-HHHHHHHHh
Q 020650 283 GFLSQLVQEKP-IEECVRAGC 302 (323)
Q Consensus 283 g~~~~l~~g~~-~~~a~~~A~ 302 (323)
-..+.+.-..+ .-+|+.-|+
T Consensus 199 v~aaF~av~~d~~~~A~~~A~ 219 (265)
T COG2145 199 VVAAFLAVEKDPLLDAAAEAC 219 (265)
T ss_pred HHHHHHhcCCCHHHHHHHHHH
Confidence 87777777777 355555443
|
|
| >PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0011 Score=61.13 Aligned_cols=167 Identities=16% Similarity=0.093 Sum_probs=79.4
Q ss_pred eecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEe--------ecC-----CCCce-eEEEE
Q 020650 40 YIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY--------EDE-----SASTG-TCAVC 105 (323)
Q Consensus 40 ~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~--------~~~-----~~~t~-~~~~~ 105 (323)
...||.|.-+|..++.+ + +.+|.+.++++. +.+.+.| +.+|-.-.+ ... +.+.- ..++.
T Consensus 92 ~r~GGnA~imAn~la~l-~-~~~Vil~~p~~s----k~~~~l~-~~~i~~P~v~~~~~~l~~~~~a~~~~~~~~iH~IlE 164 (444)
T PF04587_consen 92 ERMGGNAGIMANRLANL-E-GCPVILYAPILS----KEQAELF-NDNIYVPVVENGELKLIHPREAFKEDDEDDIHLILE 164 (444)
T ss_dssp EEEESHHHHHHHHHCCT-T--SEEEEE-SS------HHHHTTS-SSSEEEEEEETTEEEEEEGGGS-STT----EEEEEE
T ss_pred cccCchHHHHHHHHHhC-C-CCEEEEecCcCC----HHHHHhc-ccCcccccccCCcccccCchhccccCCccceEEEEE
Confidence 45999888888777752 2 467777775654 3344555 333321111 000 01122 23333
Q ss_pred EeCCccce-eecccccccC-----CcccCCC-cchhhhhc----cccEEEEeccccccC----HH-------HHHHHHHH
Q 020650 106 VVGGERSL-VANLSAANCY-----KSEHLKK-PENWALVE----KAKYFYIAGFFLTVS----PD-------SIQLVAEH 163 (323)
Q Consensus 106 ~~~g~~~~-~~~~~~~~~~-----~~~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~----~~-------~~~~~~~~ 163 (323)
+..|++.- +..+.+++-+ ....+.. +++.+.+. .+|+++++|++..-. .+ .+.+.++.
T Consensus 165 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~ 244 (444)
T PF04587_consen 165 YKKGEKWGDITAPRANRFIVSSDPYNPRLSILEEFFEALEEIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKL 244 (444)
T ss_dssp E-TTEEETTEE-SS-EEEEEEE-SSGGGTS--HHHHHSHHHHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHH
T ss_pred cCCCCeecceecCcCceEEEecCCCCccccchHHHHHHHHhhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHh
Confidence 44554321 1222222111 1111111 22334444 499999999985321 11 23333334
Q ss_pred HH-hCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 164 AA-ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 164 ~~-~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
++ ..++++-+.+.+..-.+.....+..+++++|.+=+|++|+..+....+
T Consensus 245 l~~~~~~~iH~E~As~~d~~l~~~i~~~ilp~vDSlGmNEqEL~~l~~~lg 295 (444)
T PF04587_consen 245 LKSNPDIPIHLELASFADEELRKEILEKILPHVDSLGMNEQELANLLSVLG 295 (444)
T ss_dssp HH-HTT-EEEEE----SSHHHHHHHHHHHGGGSSEEEEEHHHHHHHHHHTT
T ss_pred ccCCCCCceEEEeccccCHHHHHHHHHHhhccccccccCHHHHHHHHHHhC
Confidence 54 466788888765432333555567899999999999999999876554
|
ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A. |
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0039 Score=56.70 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=50.6
Q ss_pred ccccEEEEeccccccC-----------HHHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHH
Q 020650 138 EKAKYFYIAGFFLTVS-----------PDSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEA 205 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~ 205 (323)
..+|.++++|++..-. .+-+.+.++.++. .++++-+.+.+..-.+.....+..+++.+|.+=+|++|+
T Consensus 208 ~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~~~i~~L~~~~~i~iH~E~As~~~~~l~~~i~~~ilp~vDSlGMNE~EL 287 (446)
T TIGR02045 208 EPVDGAILSGYQGIKEEYSDGKTAKYYLERAKEDIELLKKNKDLKIHVEFASIQNREIRKKVVTNIFPHVDSVGMDEAEI 287 (446)
T ss_pred hcccEEEEEchhhhhhhccCCccHhHHHHHHHHHHHHHhhCCCCeEEEEecccccHHHHHHHHHhhccccccccCCHHHH
Confidence 5689999999884321 1223344444433 456677777553322334455668899999999999999
Q ss_pred HHHHhhcCC
Q 020650 206 RTFSKVQGW 214 (323)
Q Consensus 206 ~~l~~~~~~ 214 (323)
..+....|.
T Consensus 288 a~ll~~lg~ 296 (446)
T TIGR02045 288 ANVLSVLGY 296 (446)
T ss_pred HHHHHHhcC
Confidence 998865544
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0052 Score=55.97 Aligned_cols=79 Identities=16% Similarity=0.122 Sum_probs=49.8
Q ss_pred hhhccccEEEEeccccccC---HHHHHHHHH---HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHH
Q 020650 135 ALVEKAKYFYIAGFFLTVS---PDSIQLVAE---HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTF 208 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l 208 (323)
+....+|+++++|++.... .+.+..+.+ .++..++++-+++.+.. .......+.++++.+|-+-+|++|+..+
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~~-d~~~r~~i~~ilp~vDSlGmNE~ELa~l 298 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFTP-DETVREEILGLLGKFYSVGLNEVELASI 298 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeeccc-hHHHHHHHHhhCccccccccCHHHHHHH
Confidence 3346799999999884321 122333333 33334566777775322 2223444556899999999999999999
Q ss_pred HhhcCC
Q 020650 209 SKVQGW 214 (323)
Q Consensus 209 ~~~~~~ 214 (323)
....+.
T Consensus 299 l~~lg~ 304 (453)
T PRK14038 299 MEVMGE 304 (453)
T ss_pred HHHhcc
Confidence 876554
|
|
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.18 Score=43.61 Aligned_cols=149 Identities=22% Similarity=0.170 Sum_probs=75.7
Q ss_pred hccccEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCchhHHHHHHHHHHhhcCCC-cEEEeCHHHHHHHHhhcCC
Q 020650 137 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAPFICEFFKDALEKVLPYM-DYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 137 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~l~~~-dvl~~n~~e~~~l~~~~~~ 214 (323)
.+..|.+.+++ .+....+....+.+.. +.. .++++|...-.. ......++... -|+.+..-|++.|++....
T Consensus 99 ~~~~~avviGp-GlG~~~~~~~~~~~~l-~~~~~p~ViDADaL~~----la~~~~~~~~~~~VlTPH~gEf~rL~g~~~~ 172 (284)
T COG0063 99 VERADAVVIGP-GLGRDAEGQEALKELL-SSDLKPLVLDADALNL----LAELPDLLDERKVVLTPHPGEFARLLGTEVD 172 (284)
T ss_pred hccCCEEEECC-CCCCCHHHHHHHHHHH-hccCCCEEEeCcHHHH----HHhCcccccCCcEEECCCHHHHHHhcCCccc
Confidence 46788988874 3344443333333222 333 778888864321 11122333333 4555999999999874222
Q ss_pred C-CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC-
Q 020650 215 E-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK- 292 (323)
Q Consensus 215 ~-~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~- 292 (323)
+ ..+-.+.++.+ ...... +|+-.|..-++....++.+..+.- . .-.-+-|.||+.++-+..-|.++.
T Consensus 173 ~~~~~r~~~a~~~------a~~~~~-vvVLKG~~tvI~~~~g~~~~n~~G-~---~~ma~GGtGDvLaGii~alLAq~~~ 241 (284)
T COG0063 173 EIEVDRLEAAREL------AAKYGA-VVVLKGAVTVIADPDGEVFVNPTG-N---PGMATGGTGDVLAGIIGALLAQGPA 241 (284)
T ss_pred ccccchHHHHHHH------HHHcCC-EEEEeCCCCEEEcCCCcEEEcCCC-C---HHhccCcchHHHHHHHHHHHhCCCC
Confidence 2 22334555555 222233 444446555555423344433221 1 234556999998765555555551
Q ss_pred CHHHHHHHHh
Q 020650 293 PIEECVRAGC 302 (323)
Q Consensus 293 ~~~~a~~~A~ 302 (323)
++.+|+..|+
T Consensus 242 ~~~~Aa~~g~ 251 (284)
T COG0063 242 DPLEAAAAGA 251 (284)
T ss_pred CHHHHHHHHH
Confidence 3445444443
|
|
| >cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.13 Score=47.31 Aligned_cols=170 Identities=15% Similarity=0.034 Sum_probs=87.2
Q ss_pred CceeecCchHHHHHHHHHHhcCCCC-cEEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCcee-EEEEEeCCccce-
Q 020650 37 NVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGT-CAVCVVGGERSL- 113 (323)
Q Consensus 37 ~~~~~~GG~~~n~a~~l~~l~g~g~-~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~-~~~~~~~g~~~~- 113 (323)
....+.||.|.-+|..++. +| . +|.+.+++..... ...+.+.+|-.-.......+.-. .++.+..|++.-
T Consensus 100 ~~~~~mGGnAgimAn~la~-~g--~~~Vil~~p~~~k~~----~~L~~d~~i~~p~~e~~~~~d~IHlIlEy~~G~~~~~ 172 (445)
T cd01938 100 WDELRMGGNAGLMANRLAG-EG--DLKVLLGVPQSSKLQ----AELFLDGPIVVPTFENLIEEDEIHLILEYPRGESWGD 172 (445)
T ss_pred CceEEeCChHHHHHHHHHh-cC--CceEEEecCCCcHHH----HHhCCCCCeeecccccCCCCCccEEEEEcCCCCEecc
Confidence 4568999999998888886 44 7 7777776554322 22222212111111100111222 222233444311
Q ss_pred eecccccc------cCCcccCCCcchhhhh-cc-ccEEEEeccccccC----HHHHHHHHHHHH----h--CCCeEEEeC
Q 020650 114 VANLSAAN------CYKSEHLKKPENWALV-EK-AKYFYIAGFFLTVS----PDSIQLVAEHAA----A--NNKVFMMNL 175 (323)
Q Consensus 114 ~~~~~~~~------~~~~~~~~~~~~~~~~-~~-~~~v~i~~~~~~~~----~~~~~~~~~~~~----~--~~~~~~~d~ 175 (323)
+..+.+++ ..++ .....++...+ +. .|+++++|+.+.-. .....+.++.++ . ..+++=+.+
T Consensus 173 ~~aPraNRfI~~~d~~n~-l~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~~~~l~~l~~~i~iH~E~ 251 (445)
T cd01938 173 FVAPRANRFIFHDDDNNP-MLMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERVKSILEILPPLIPIHLEL 251 (445)
T ss_pred eEcCCCCeEEEecCCcch-hhhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHHHHHHHhccccCcEEEEe
Confidence 11112211 1111 11112222333 33 89999999984221 233444444333 2 225666676
Q ss_pred CchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 176 SAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
.+..-.+...+.+..+++++|-+=+|++|+..+....+.
T Consensus 252 As~~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~~~lg~ 290 (445)
T cd01938 252 ASTVDEELREEILHEVVPYVDSLGLNEQELANLLQVLGG 290 (445)
T ss_pred cccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhCC
Confidence 553323335555678899999999999999999765543
|
ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers. |
| >COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.74 E-value=4.1 Score=36.47 Aligned_cols=79 Identities=13% Similarity=0.071 Sum_probs=51.5
Q ss_pred hhhccccEEEEecccccc----CH-------HHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCH
Q 020650 135 ALVEKAKYFYIAGFFLTV----SP-------DSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNE 202 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~----~~-------~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~ 202 (323)
+.....|..+++|++.-. +. +...+-++.++. .++++-+.+.+-.-....++.+..+++.++-+=+|+
T Consensus 221 ~i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~~d~~irk~i~~~il~~v~SvGldE 300 (466)
T COG4809 221 EIAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASIQDRKIRKEILTNILSIVYSVGLDE 300 (466)
T ss_pred HHhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEecccccHHHHHHHHHHHHhhhhhcCCCH
Confidence 345669999999997421 11 223344444555 566666666543222334555667999999999999
Q ss_pred HHHHHHHhhcC
Q 020650 203 TEARTFSKVQG 213 (323)
Q Consensus 203 ~e~~~l~~~~~ 213 (323)
.|...+....|
T Consensus 301 ~ElA~vl~vlG 311 (466)
T COG4809 301 VELANVLNVLG 311 (466)
T ss_pred HHHHHHHHhhC
Confidence 99998887665
|
|
| >PRK10076 pyruvate formate lyase II activase; Provisional | Back alignment and domain information |
|---|
Probab=89.89 E-value=1.9 Score=35.70 Aligned_cols=68 Identities=10% Similarity=-0.000 Sum_probs=49.7
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEe-----CHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFG-----NETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~e~~~l~~ 210 (323)
+...|.++|--+.+.++.+.++++.+++.|+.+.+|-.... ..+.++.+++.+|.+.+ +.+..+.++|
T Consensus 38 sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~----~~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG 110 (213)
T PRK10076 38 SGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDA----PASKLLPLAKLCDEVLFDLKIMDATQARDVVK 110 (213)
T ss_pred CCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCC----CHHHHHHHHHhcCEEEEeeccCCHHHHHHHHC
Confidence 34678888766667788999999999999999999887754 33456677777777654 4555556665
|
|
| >KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=87.22 E-value=6.8 Score=34.61 Aligned_cols=165 Identities=13% Similarity=0.124 Sum_probs=84.3
Q ss_pred CCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccc-ee
Q 020650 36 YNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERS-LV 114 (323)
Q Consensus 36 ~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~ 114 (323)
....++.||++.-+|.-.. +. ..+.++|+.|.-.. +-|--..+.+..-++++..... +..++.|+.. -.
T Consensus 136 ~R~~~~mGGNA~LMA~R~~--~~--~~~~LlG~~~~R~~-----~~L~P~~~R~~~~~I~~DdiHl-ILEYK~Gd~~G~~ 205 (478)
T KOG4184|consen 136 ERINWYMGGNAPLMAVRFF--ME--GAQVLLGAHMSRKL-----RPLLPKEIRLAGDEIPNDDIHL-ILEYKAGDKWGPY 205 (478)
T ss_pred hhhhhhccCCchHHHHHHH--hc--cceeeecccccchh-----ccccchhhhcccCcCcCCceEE-EEEeccCCccccc
Confidence 3456789998777665544 23 58899999886422 1122222334333333332222 2223333321 00
Q ss_pred ecccccc------cCCcccCCCcchhhhhc--cccEEEEeccccc-c-CHHHHHHHHHHHHh------CCCeEEEeCCch
Q 020650 115 ANLSAAN------CYKSEHLKKPENWALVE--KAKYFYIAGFFLT-V-SPDSIQLVAEHAAA------NNKVFMMNLSAP 178 (323)
Q Consensus 115 ~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~v~i~~~~~~-~-~~~~~~~~~~~~~~------~~~~~~~d~~~~ 178 (323)
..+.+++ ..++...-...+.++++ +.|+++++|..+. . +.|..++=++..++ .|+++-++..+.
T Consensus 206 VAP~anR~I~~~D~~n~~m~~~E~f~~Al~~fqPdLvVvsGlhmme~qske~r~~rl~~V~r~L~~iP~gip~HlElaS~ 285 (478)
T KOG4184|consen 206 VAPRANRYILHNDRNNPHMRAVEQFTDALKMFQPDLVVVSGLHMMEMQSKEEREARLQQVVRSLSDIPTGIPVHLELASM 285 (478)
T ss_pred ccccccceeeecCCCChHHHHHHHHHHHHHHhCCCEEEEechhHHhhhhHHHHHHHHHHHHHHHhcCCCCCchhhhHhHH
Confidence 1111111 12221111111333333 4799999997642 1 23332222222222 345666676654
Q ss_pred hHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHh
Q 020650 179 FICEFFKDALEKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 179 ~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
.-.+...+.+.++++++|-+=+|++|+..|..
T Consensus 286 ~~~~l~~~i~h~VlPyVdSLGlNEQEL~fL~q 317 (478)
T KOG4184|consen 286 TNRELMSSIVHQVLPYVDSLGLNEQELLFLTQ 317 (478)
T ss_pred HHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence 43334555667889999999999999988854
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 323 | ||||
| 1bx4_A | 345 | Structure Of Human Adenosine Kinase At 1.50 Angstro | 1e-111 | ||
| 3loo_A | 365 | Crystal Structure Of Anopheles Gambiae Adenosine Ki | 3e-93 | ||
| 2xtb_A | 347 | Crystal Structure Of Trypanosoma Brucei Rhodesiense | 9e-67 | ||
| 3uq6_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 3e-57 | ||
| 3vaq_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 3e-57 | ||
| 3vas_A | 370 | Adenosine Kinase From Schistosoma Mansoni In Comple | 4e-57 | ||
| 1lii_A | 363 | Structure Of T. Gondii Adenosine Kinase Bound To Ad | 1e-42 | ||
| 1lio_A | 363 | Structure Of Apo T. Gondii Adenosine Kinase Length | 2e-41 | ||
| 2abs_A | 383 | Crystal Structure Of T. Gondii Adenosine Kinase Com | 4e-41 | ||
| 1dgm_A | 363 | Crystal Structure Of Adenosine Kinase From Toxoplas | 7e-41 | ||
| 4e3a_A | 352 | Crystal Structure Of Probable Sugar Kinase Protein | 2e-11 | ||
| 3h49_A | 325 | Crystal Structure Of A Putative Ribokinase (Apo For | 1e-10 | ||
| 3ubo_A | 354 | The Crystal Structure Of Adenosine Kinase From Sino | 2e-10 | ||
| 1rk2_A | 309 | E. Coli Ribokinase Complexed With Ribose And Adp, S | 4e-09 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 2e-08 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 4e-08 | ||
| 2fv7_A | 331 | Crystal Structure Of Human Ribokinase Length = 331 | 8e-08 | ||
| 1tz6_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 7e-07 | ||
| 1tyy_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 1e-06 | ||
| 1v19_A | 309 | 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop | 2e-06 | ||
| 2nwh_A | 317 | Carbohydrate Kinase From Agrobacterium Tumefaciens | 3e-06 | ||
| 1vm7_A | 311 | Crystal Structure Of Ribokinase (Tm0960) From Therm | 4e-06 | ||
| 3q1y_A | 320 | Allosteric Regulation By Lysine Residue: A Novel An | 5e-05 | ||
| 3hic_A | 320 | The Crystal Structure Of Phosphofructokinase(Lin219 | 8e-05 | ||
| 3b3l_A | 298 | Crystal Structures Of Alternatively-Spliced Isoform | 1e-04 | ||
| 3nbv_A | 313 | X-Ray Structure Of Ketohexokinase In Complex With A | 2e-04 | ||
| 4du5_A | 336 | Crystal Structure Of Pfkb Protein From Polaromonas | 3e-04 |
| >pdb|1BX4|A Chain A, Structure Of Human Adenosine Kinase At 1.50 Angstroms Length = 345 | Back alignment and structure |
|
| >pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In Complex With P1,P4-Di(Adenosine-5) Tetraphosphate Length = 365 | Back alignment and structure |
|
| >pdb|2XTB|A Chain A, Crystal Structure Of Trypanosoma Brucei Rhodesiense Adenosine Kinase Complexed With Activator Length = 347 | Back alignment and structure |
|
| >pdb|3UQ6|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine And Amp Length = 372 | Back alignment and structure |
|
| >pdb|3VAQ|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine Length = 372 | Back alignment and structure |
|
| >pdb|3VAS|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine In Occluded Loop Conformation Length = 370 | Back alignment and structure |
|
| >pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine 2 And Amp-Pcp Length = 363 | Back alignment and structure |
|
| >pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase Length = 363 | Back alignment and structure |
|
| >pdb|2ABS|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed With Amp-Pcp Length = 383 | Back alignment and structure |
|
| >pdb|1DGM|A Chain A, Crystal Structure Of Adenosine Kinase From Toxoplasma Gondii Length = 363 | Back alignment and structure |
|
| >pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Length = 352 | Back alignment and structure |
|
| >pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 | Back alignment and structure |
|
| >pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From Sinorhizobium Meliloti Length = 354 | Back alignment and structure |
|
| >pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 | Back alignment and structure |
|
| >pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 | Back alignment and structure |
|
| >pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 | Back alignment and structure |
|
| >pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 | Back alignment and structure |
|
| >pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens Length = 317 | Back alignment and structure |
|
| >pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 | Back alignment and structure |
|
| >pdb|3Q1Y|A Chain A, Allosteric Regulation By Lysine Residue: A Novel Anion-Hole Formation In The Ribokinase Family Length = 320 | Back alignment and structure |
|
| >pdb|3HIC|A Chain A, The Crystal Structure Of Phosphofructokinase(Lin2199)from Listeria Innocua Length = 320 | Back alignment and structure |
|
| >pdb|3B3L|A Chain A, Crystal Structures Of Alternatively-Spliced Isoforms Of Human Ketohexokinase Length = 298 | Back alignment and structure |
|
| >pdb|3NBV|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp And Fructose Length = 313 | Back alignment and structure |
|
| >pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 1e-158 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 1e-157 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 1e-155 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 1e-135 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 2e-52 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 8e-47 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 6e-38 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 5e-37 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 1e-36 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 4e-35 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 5e-35 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-33 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 4e-33 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 9e-33 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 1e-32 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 3e-32 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 7e-32 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 2e-30 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 2e-30 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 6e-30 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 7e-30 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 2e-29 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 7e-29 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 9e-29 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 1e-28 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 2e-28 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 3e-28 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 7e-28 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 8e-28 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 2e-27 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 1e-26 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 4e-25 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 4e-25 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 5e-25 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 2e-24 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 5e-24 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 1e-18 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 3e-17 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 1e-07 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 1e-07 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 2e-07 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 3e-07 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 7e-07 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 9e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 1e-05 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 1e-04 |
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 444 bits (1144), Expect = e-158
Identities = 160/340 (47%), Positives = 234/340 (68%), Gaps = 20/340 (5%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYIAGG 44
++G+L+G+GNPLLDIS+VV+ D LNKYD E+ KY EYIAGG
Sbjct: 22 RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGG 81
Query: 45 ATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 104
+ QNS+RVAQW+LQ P + GC+G+D++ +++ + GVNV Y ++ TGTCAV
Sbjct: 82 SVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAV 141
Query: 105 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164
V G +RSL ANL+AAN + EHL+ N A ++ A++FY++GFF TVS +S VA+ A
Sbjct: 142 LVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEA 201
Query: 165 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 224
AA ++FMMNLSAPF+ +F+K+ LE++ PY+D +FGNETEA +K + T+D+ EI
Sbjct: 202 AATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGK 261
Query: 225 KLSQWPKASEIRKRTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVG 282
+++ PK + RKR +ITQG+DPV++ + G +++FPV L +++VDTNGAGDAFVG
Sbjct: 262 RIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVG 321
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 322
GFL+QL+Q + ++ C++ G + + IIQRSGCT+ +P F
Sbjct: 322 GFLAQLLQSRTVDVCIKCGIWAAREIIQRSGCTFEGEPSF 361
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-157
Identities = 130/344 (37%), Positives = 191/344 (55%), Gaps = 21/344 (6%)
Query: 1 MAQEGI-LLGMGNPLLDISSVVDDDFLNKYD------------------EMASKYNVEYI 41
MA + + NPLLD+S+ V D+FL KY ++ NV Y+
Sbjct: 3 MASAPLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYV 62
Query: 42 AGGATQNSIRVAQWML--QIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAST 99
GG+ N RVAQWM +Y+GCI D++G+ +K+ ++ G+ + A +
Sbjct: 63 PGGSGLNVARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGS 122
Query: 100 GTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 159
G CAVC+ G ER+LVA+L AAN SEH++ P +++++ FY +GF LTV + +
Sbjct: 123 GACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQ 182
Query: 160 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 219
A + +FM+NLSAPFI +FF L +VLPY D I N EA+ F+ + W+TD V
Sbjct: 183 ACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCV 242
Query: 220 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279
EEIA + + + R V T+ + V+A ++ PV L +DK++D NGAGDA
Sbjct: 243 EEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDA 302
Query: 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
F+GGFLS K + C G YT+ +IQR GC++PEKP F+
Sbjct: 303 FMGGFLSAYAVGKDLRRCCETGHYTAQEVIQRDGCSFPEKPSFS 346
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 437 bits (1125), Expect = e-155
Identities = 187/342 (54%), Positives = 248/342 (72%), Gaps = 20/342 (5%)
Query: 2 AQEGILLGMGNPLLDISSVVDDDFLNK------------------YDEMASKYNVEYIAG 43
+E IL GMGNPLLDIS+VVD DFL+K +DE+ K+ VEY AG
Sbjct: 4 VRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 63
Query: 44 GATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 102
G+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTC
Sbjct: 64 GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTC 123
Query: 103 AVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161
A C+ G RSL+ANL+AANCYK E HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 124 AACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVA 183
Query: 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 221
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++E
Sbjct: 184 HHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKE 243
Query: 222 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 281
IA K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFV
Sbjct: 244 IAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFV 303
Query: 282 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GGFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 304 GGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 345
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 387 bits (996), Expect = e-135
Identities = 99/349 (28%), Positives = 162/349 (46%), Gaps = 40/349 (11%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYD-----------------EMASKYNVEYIAGGATQNS 49
+ +GNP+LD+ + V FL+++ ++N + GG+ NS
Sbjct: 35 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNS 94
Query: 50 IRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGG 109
+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STG CAV +
Sbjct: 95 VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEK 154
Query: 110 ERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA-ANN 168
ER+L +L A ++ A FY + LT +P + VA +A N
Sbjct: 155 ERTLCTHLGACGSFRLPED----WTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPN 210
Query: 169 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL---- 224
+F +NLSAPF E +KDA++ +L + + +FGNE E +KV + ++
Sbjct: 211 AIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKE 270
Query: 225 ---------KLSQWPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDKL 270
+ + V+T+G +PV+ A+ + + V V+ +K+
Sbjct: 271 HAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKI 330
Query: 271 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319
VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G +
Sbjct: 331 VDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSFT 379
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 2e-52
Identities = 75/329 (22%), Positives = 130/329 (39%), Gaps = 43/329 (13%)
Query: 7 LLGMGNPLLDISSVVDDDFLNK------------YDEMASKY----NVEYIAGGATQNSI 50
+L +GN ++DI S +D FL + Y +GG+ N+
Sbjct: 28 VLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTA 87
Query: 51 RVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-G 108
+ G +Y G + D+ G+ + + GV+ + T + V
Sbjct: 88 AGVA---NLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTED 144
Query: 109 GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAG--FFLTVSPDSIQLVAEHAAA 166
GERS+ L A E + +V AK Y G + + ++I A A
Sbjct: 145 GERSMNTYLGACVELGPEDV----EADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQ 200
Query: 167 NNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEEIAL 224
+ + M LS F + ++ ++ +D +F N EA + +TDD EE
Sbjct: 201 HGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLY-----QTDDFEEALN 255
Query: 225 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 284
+++ K A +T + V+ + + I ++VDT GAGD F GF
Sbjct: 256 RIAADCK-------IAAVTMSENGAVILKGRERYYVNAI--RIREVVDTTGAGDLFASGF 306
Query: 285 LSQLVQEKPIEECVRAGCYTSHVIIQRSG 313
L Q + +E+C + GC + ++IQ+ G
Sbjct: 307 LYGYTQGRSLEDCGKLGCLAAGIVIQQIG 335
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 8e-47
Identities = 56/311 (18%), Positives = 111/311 (35%), Gaps = 27/311 (8%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
+L +G +LD+ S+VD K D + + GG NS + + +++
Sbjct: 20 ILCVGLVVLDVISLVDKYP--KEDSEIRCLSQRWQRGGNASNSCTILS---LLGAPCAFM 74
Query: 67 GCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVANLSAANCY 123
G + + + + + V++ Y + S V + G R+++ +
Sbjct: 75 GSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDV 134
Query: 124 KSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEF 183
+ +K + + K+ +I G + +Q + H + + E
Sbjct: 135 SATDFEK----VDLTQFKWIHIEGRNASEQVKMLQRIDAHNTR--QPPEQKIRVSVEVEK 188
Query: 184 FKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243
++ L ++ Y D +F ++ A+ EE L + + V
Sbjct: 189 PREELFQLFGYGDVVFVSKDVAKHLG------FQSAEEALRGLYGRVR----KGAVLVCA 238
Query: 244 QGADPVVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 302
+ DGKL P ++VDT GAGD F + L Q + ++E +R GC
Sbjct: 239 WAEEGADALGPDGKLLHSDAF--PPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGC 296
Query: 303 YTSHVIIQRSG 313
+ G
Sbjct: 297 QVAGKKCGLQG 307
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 6e-38
Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVANL 117
+ + C+G D ++ K +N+ Y E T A +
Sbjct: 57 VNSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPK-AWIFTDKDNNQITFFLW 115
Query: 118 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLS- 176
AA YK + + + ++ + + A +++
Sbjct: 116 GAAKHYKELNPPN-------FNTE-------IVHIATGDPEFNLKCAKKAYGNNLVSFDP 161
Query: 177 APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236
+ ++ K+ L +++ + +++F N+ E S + +E DD E R
Sbjct: 162 GQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLE--------------R 207
Query: 237 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 296
++T+G+ V+ K + P I K++D GAGD++ GFLS V+ +E+
Sbjct: 208 VDALIVTKGSKGSVIYTKDKKIEIPCI--KAGKVIDPTGAGDSYRAGFLSAYVKGYDLEK 265
Query: 297 CVRAGCYTSHVIIQRSGC 314
C G T+ +++ GC
Sbjct: 266 CGLIGAATASFVVEAKGC 283
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 5e-37
Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 27/258 (10%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-GGERS-LVANLSA 119
T+ + IGKD G+ + + + +++ +D S T V GER+ + +
Sbjct: 60 TALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGS 119
Query: 120 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLVAEHAAANN-KVFMMNLS 176
+ + ++A +AK +A F + + ++ + A A + +
Sbjct: 120 LWKLNIDDV----DFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIK 175
Query: 177 -APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235
D + + L Y+DY+F N EA+ + + ++EIA
Sbjct: 176 PRL---NETLDDICEALSYVDYLFPNFAEAKLLT-----GKETLDEIADCFL------AC 221
Query: 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIE 295
+T VI G D + + K P + +DT GAGD F GF++ L++ K +
Sbjct: 222 GVKTVVIKTGKDGCFIKRGDMTMKVPAV--AGITAIDTIGAGDNFASGFIAALLEGKNLR 279
Query: 296 ECVRAGCYTSHVIIQRSG 313
EC R T+ + + G
Sbjct: 280 ECARFANATAAISVLSVG 297
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-36
Identities = 48/267 (17%), Positives = 89/267 (33%), Gaps = 30/267 (11%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCV-VGGERSLVANLS 118
G + +G G D + K GVN + E+A T V +
Sbjct: 72 GEVALVGAAGADFAD--YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPG 129
Query: 119 AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP 178
A + ++ L + + + K + I P+++ L E F + +
Sbjct: 130 AMSEARNIKL--ADVVSAIGKPELVIIG----ANDPEAMFLHTEECRKLGLAFAADP-SQ 182
Query: 179 FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238
+ + + +++ Y+F N+ E GW DV +
Sbjct: 183 QLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMA--------------QID 228
Query: 239 TAVITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 297
V T G V + + DG V+ P+ D G GDAF GFL+ +E
Sbjct: 229 LRVTTLGPKGVDLVEPDGTTIHVGVV--PETSQTDPTGVGDAFRAGFLTGRSAGLGLERS 286
Query: 298 VRAGCYTSHVIIQRSGCT--YPEKPEF 322
+ G + ++++ +G +
Sbjct: 287 AQLGSLVAVLVLESTGTQEWQWDYEAA 313
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 4e-35
Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 36/263 (13%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV---GGERSLVA 115
G T+++ +G D+ G+ + ++SK G ++ E ST T + ++ G S +A
Sbjct: 56 GVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPT-YLAILDENGEMVSAIA 114
Query: 116 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFM 172
++ + ++ + + E A+Y + L+ N +
Sbjct: 115 DMKSIGAMNTDFIDS--KREIFENAEYT------VLDSDNPEIMEYLLKNFKDKTNFILD 166
Query: 173 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232
SA ++ ++ I N EA + +TDD+ + +
Sbjct: 167 PV-SAEKA-----SWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYF------ 214
Query: 233 SEIRK--RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 290
+ + I+ AD + K + + + GAGD+FV G +
Sbjct: 215 --LGLGIKKVFISLDADGIFYNDGVSCGKIKA---TEVDVKNVTGAGDSFVAGLGYGYMN 269
Query: 291 EKPIEECVRAGCYTSHVIIQRSG 313
+ PIE+ V+ S++ I
Sbjct: 270 KMPIEDIVKFAMTMSNITISHEE 292
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 5e-35
Identities = 42/267 (15%), Positives = 79/267 (29%), Gaps = 34/267 (12%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVANL 117
G +G +G + G++ Y + A+ + +
Sbjct: 62 GDARMMGTLGAV-DAQPYLDRMDALGLSREYVRVLPDTYSAQ-AMITTDLDNNQITAFHP 119
Query: 118 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSA 177
A H + ++ L + E A F+ +
Sbjct: 120 GAMMQSHVNHAGEAKDIKLA----------IVGPDGFQGMVQHTEELAQAGVPFIFDP-G 168
Query: 178 PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 237
+ F L + + YI N+ EA+ GW +EIA ++
Sbjct: 169 QGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDEIASRV----------- 214
Query: 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 297
+ +IT+G + ++ P + ++++D G GDAF GG L +
Sbjct: 215 QALIITRGEHGATIRHRDGTEQIPAV--RAERVIDPTGCGDAFRGGLLYGIEHGFDWATA 272
Query: 298 VRAGCYTSHVIIQRSGC--TYPEKPEF 322
R + I G P + E
Sbjct: 273 GRLASLMGALKIAHQGPQTYAPTRAEI 299
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-33
Identities = 57/284 (20%), Positives = 105/284 (36%), Gaps = 30/284 (10%)
Query: 42 AGGATQN-SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESAST 99
G T N + +A+ L+ SY IG D ++M+ AG++ +
Sbjct: 49 FAGDTFNTAWYLAR--LRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTV 106
Query: 100 GTCAVCVVGGERSLV--ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS- 156
G + + GERS SAA + A + +A Y +G L +
Sbjct: 107 GLYLITLEQGERSFAYWRGQSAARELAGDA---DALAAAMARADVVYFSGITLAILDQCG 163
Query: 157 ----IQLVAEHAAANNKV-FMMNLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFS 209
++ +A+ A + F NL + + + D + + +
Sbjct: 164 RATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAW- 222
Query: 210 KVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK 269
+ + A + ++ R+ V+ G V QDG+ + PV P +
Sbjct: 223 ----FGDAGPDATADRYARAGV------RSVVVKNGPHAVHFLQDGRRGRVPVP--PVAQ 270
Query: 270 LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313
+VDT AGD+F G L ++ +P+E + A + ++Q G
Sbjct: 271 VVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGKG 314
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 4e-33
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 35/263 (13%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERS-LVANL 117
G I G D GE + + ++ AGV + T + + G +A++
Sbjct: 53 GFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADM 112
Query: 118 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHA-AANNKVFMM 173
+ LK + + F L + D++ + A A + +
Sbjct: 113 DLYKLFTPRRLKVRAVREAIIASD------FLLCDANLPEDTLTALGLIARACEKPLAAI 166
Query: 174 NLS-APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232
+S A + L+ L +D +F NE EAR + G ++V + L
Sbjct: 167 AISPAKAV------KLKAALGDIDILFMNEAEARALT---GETAENVRDWPNIL------ 211
Query: 233 SEIRK--RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 290
+ V+T+GA VV + K + ++ D GAGDA G+L+ + +
Sbjct: 212 --RKAGLSGGVVTRGASEVVAFNGTE--KAILHPPLIREVKDVTGAGDAMASGYLAAIAE 267
Query: 291 EKPIEECVRAGCYTSHVIIQRSG 313
K I E +R G + + +Q S
Sbjct: 268 GKTIREALRQGAAAAAITVQSSF 290
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 9e-33
Identities = 47/266 (17%), Positives = 82/266 (30%), Gaps = 47/266 (17%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSLVANLSA 119
+G E + G+N + + E S C + G ++ + A
Sbjct: 71 IPFDLYSAVGMKTHRE-YLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGA 129
Query: 120 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPF 179
+ + + E V + + A + + + +
Sbjct: 130 MAAWAPQLADEYEY------------------VHFSTGPNYLDMAKSIRSKIIFDP-SQE 170
Query: 180 ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239
I ++ KD L+K N+ E R F ++ G + V T
Sbjct: 171 IHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSPKV-------------------T 211
Query: 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 299
++T G + DGK FP I DT GAGD+F G L + IE+ +
Sbjct: 212 TIVTNGERGSSLFMDGKKYDFPAIPSS----GDTVGAGDSFRAGLYLALYNRRSIEKGMI 267
Query: 300 AGCYTSHVIIQRSGC--TYPEKPEFN 323
G +H +I G +
Sbjct: 268 YGTIIAHHVIDD-GIENFSLNMEDLE 292
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-32
Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 34/290 (11%)
Query: 42 AGGATQN-SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESAST 99
GG T N S+ +A+ + Y+ +G D F ++M V+ E+
Sbjct: 28 FGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLP 87
Query: 100 GTCAV-CVVGGERSLV--ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS 156
G + GER+ N +AA + + + Y Y++G L + +
Sbjct: 88 GLYYIETDSTGERTFYYWRNEAAAKFWLASEQS-AAICEELANFDYLYLSGISLAILSPT 146
Query: 157 -----IQLVAEHAAANNKV-FMMNL------SAPFICEFFKDALEKVLPYMDYIFGNETE 204
+ L+ E A KV F N S E + +++L D F +
Sbjct: 147 SREKLLSLLRECRAKGGKVIFDNNYRPRLWASK----EETQQVYQQMLECTDIAFLTLDD 202
Query: 205 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVA-QDGKLKKFPVI 263
W VE++ + E+ V+ +GAD +V+ L P +
Sbjct: 203 EDAL-----WGQQPVEDVIARTHNAG-VKEV-----VVKRGADSCLVSIAGEALVDVPAV 251
Query: 264 VLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313
LPK+K++DT AGD+F G+L+ + E + G T+ +IQ G
Sbjct: 252 KLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRG 301
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-32
Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 27/270 (10%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSLVANLSA 119
+ I +G D FG + K + +D+ T V + A
Sbjct: 69 KKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREA 128
Query: 120 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--VFMMNL 175
+ + + + L++++K F+++ F L+ P D+ +A K F
Sbjct: 129 DMYLQEDDI----IFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCY 184
Query: 176 SAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233
+ +E+++ D++ + +AR + D E + +
Sbjct: 185 RKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHL-----FGPDSPENYVKRYLELGV-- 237
Query: 234 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 293
+ ++T G + V+ + ++ + P + VD GAGDAF GF+ L+
Sbjct: 238 ----KAVILTLGEEGVIASDGEEIIRIPAF---SEDAVDVTGAGDAFWSGFICGLLDGYT 290
Query: 294 IEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
++ ++ G + I+ G P K +
Sbjct: 291 VKRSIKLGNGVAAFKIRGVGALSPVPSKED 320
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-32
Identities = 52/276 (18%), Positives = 94/276 (34%), Gaps = 33/276 (11%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLV--- 114
+ +G D G + G++ + D + TG V G + +
Sbjct: 73 LKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHR 132
Query: 115 ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK-- 169
SAA+ + + A + A++ + G F +S ++ + A +
Sbjct: 133 KG-SAASHMGVADI----DEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSV 187
Query: 170 VFMMNLSAPF--ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLS 227
F NL E +DA+ + D++ E R E +A
Sbjct: 188 SFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFL-----TGETTPEGVARFYR 242
Query: 228 QWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 287
Q + V+ GA+ + + P ++VDT GAGD F G +S
Sbjct: 243 QLGA------KLVVVKLGAEGAYFDGEAGSGRVAGF--PVAEVVDTVGAGDGFAVGVISA 294
Query: 288 LVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
L+ + E V+ G + +Q G + P + E
Sbjct: 295 LLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAE 330
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-30
Identities = 49/275 (17%), Positives = 87/275 (31%), Gaps = 35/275 (12%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-GGERSLV--AN 116
I C+G D FG+ GV++ +TG+ V G+R +
Sbjct: 52 VPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIK 111
Query: 117 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--VFM 172
+A ++H+ + +++ +F+I G L D+++ AN F
Sbjct: 112 NAACGKLSAQHV----DENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFD 167
Query: 173 MNLSAPFI-CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231
N+ + +DAL VL D +E E S E
Sbjct: 168 PNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLS-----PHSTPERAIAGFL---- 218
Query: 232 ASEIRKRTAVITQGADPVVVAQDGKLKK---FPVIVLPKDKLVDTNGAGDAFVGGFLSQL 288
E + ++ +G + +PV VD GAGD F G +++
Sbjct: 219 --EEGVKEVIVKRGNQGASYYSANEQFHVESYPVEE------VDPTGAGDCFGGAWIACR 270
Query: 289 VQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
++ + + R G E
Sbjct: 271 QLGFDAHRALQYANACGALAVTRRGPMEGTSRLME 305
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-30
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVG--GERSLVAN 116
GA ++I C G D GE +++ +++ + STG A+ V GE + +
Sbjct: 55 GANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGV-ALIFVNGEGENVIGIH 113
Query: 117 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMM 173
A ++ + A L +S+ A+ A N + +
Sbjct: 114 AGANAALSPALVEA--QRERIANASAL------LMQLESPLESVMAAAKIAHQNKTIVAL 165
Query: 174 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL-SQWPKA 232
N AP ++ +++L +D I NETEA + ++ +D + A L + +
Sbjct: 166 NP-APA-----RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR- 218
Query: 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292
T +IT G+ V + +G+ ++ P + + VDT AGD F G ++ L++EK
Sbjct: 219 ------TVLITLGSRGVWASVNGEGQRVPG---FRVQAVDTIAAGDTFNGALITALLEEK 269
Query: 293 PIEECVRAGCYTSHVIIQRSG 313
P+ E +R + + + R G
Sbjct: 270 PLPEAIRFAHAAAAIAVTRKG 290
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-30
Identities = 55/276 (19%), Positives = 98/276 (35%), Gaps = 31/276 (11%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY--YEDESASTGTCAVC--VVGGERSLV-- 114
+IG I D+ G ++ + GV+ + E TG A E S++
Sbjct: 59 LKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGL-AFTEIKSPEECSILMY 117
Query: 115 ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--V 170
A E + N A + ++K ++G L+ SP +++ A N+ V
Sbjct: 118 RQDVADLYLSPEEV----NEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVV 173
Query: 171 FMMNLSAPF--ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 228
F ++ E V D + G E E D +E L +
Sbjct: 174 FELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRT--EKGDNDETIRYLFK 231
Query: 229 WPKASEIRKRTAVITQGADPVVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 287
VI G + + G+ + K K++ T GAGD++ FL
Sbjct: 232 H------SPELIVIKHGVEGSFAYTKAGEAYRGYAY---KTKVLKTFGAGDSYASAFLYA 282
Query: 288 LVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
L+ K IE ++ G ++ +++ + + P E
Sbjct: 283 LISGKGIETALKYGSASASIVVSKHSSSDAMPSVEE 318
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 7e-30
Identities = 50/274 (18%), Positives = 90/274 (32%), Gaps = 32/274 (11%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVC--VVGGERSLV--A 115
++ + +G D FGE + + GV+ Y D++ T C + L
Sbjct: 56 HNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPV-TFCEIFPPDDFPLYFYR 114
Query: 116 NLSAANCYKSEHLKKPE-NWALVEKAKYFYIAGFFLTVSP-DSIQLVAEHAAANNK--VF 171
A +++ + + V +A + + P AN + +F
Sbjct: 115 EPKAP----DLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRANRRHTIF 170
Query: 172 MMNLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
++ F E E L + GN+ E + E L
Sbjct: 171 DLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAV-----GETEPERAGRALL-- 223
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289
E A++ QG V+ + + P +++ GAGDAF G L+
Sbjct: 224 ----ERGVELAIVKQGPKGVMAMTKDETVEVPPF---FVDVINGLGAGDAFGGALCHGLL 276
Query: 290 QEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
E P+E+ +R ++ R C+ P E
Sbjct: 277 SEWPLEKVLRFANTAGALVASRLECSTAMPTTDE 310
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 46/293 (15%), Positives = 89/293 (30%), Gaps = 40/293 (13%)
Query: 29 YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFG--EEMKKNSKLA 85
D E GG + + G T I ++ ++ N
Sbjct: 22 KDVNVVDGKREIAYGGGVVMGAITSSLL----GVKTKVITKCTREDVSKFSFLRDN---- 73
Query: 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 145
GV V + + ++ R +SAA+ + L + + +I
Sbjct: 74 GVEVVFLKSPRTTSIENRYGSDPDTRESFL-ISAADPFTESDLAF-------IEGEAVHI 125
Query: 146 AGFFLT-VSPDSIQLVAEHA---AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGN 201
+ D I ++ +A+ + F+ + + EK L Y+D +
Sbjct: 126 NPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVD 185
Query: 202 ETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFP 261
EA T + T+D+ E + + ++ A V+V F
Sbjct: 186 SREAETLT-----GTNDLRESCRIIRSFGA-------KIILATHASGVIVFDG----NFY 229
Query: 262 VIVLPKDKLVDTNGAGDAFVGGFL-SQLVQEKPIEECVRAGCYTSHVIIQRSG 313
L G GD FL + ++ IE+ + + V ++ G
Sbjct: 230 EASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 282
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-29
Identities = 54/281 (19%), Positives = 99/281 (35%), Gaps = 30/281 (10%)
Query: 42 AGGATQNSIRVAQWMLQIPGATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTG 100
GGA N A + + G S + +G D+ G+E+ + K + E TG
Sbjct: 23 IGGAPAN---FA-YHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQI-ERVDYPTG 77
Query: 101 TCAVCVV-GGERS--LVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--D 155
T V + G + ++ N ++ LK L +
Sbjct: 78 TVQVTLDDEGVPCYEIKEGVAWDNIPFTDELK-----RLALNTRAVCFGSLAQRNEVSRA 132
Query: 156 SIQLVAEHAAANNKVFMM---NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 212
+I + + + NL F K+ L + + + N+ E T S++
Sbjct: 133 TINRFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMF 189
Query: 213 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVD 272
G+ D+++ L + ++T G + V G + PK + D
Sbjct: 190 GYPGIDLQDKCWILLAKYNLKML-----ILTCGINGSYVFTPGVVSFQET---PKVPVAD 241
Query: 273 TNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313
T GAGD+F F + ++ K + E + S + +SG
Sbjct: 242 TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSG 282
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 9e-29
Identities = 54/276 (19%), Positives = 98/276 (35%), Gaps = 41/276 (14%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAV---CVVGGERSLV---A 115
I +G D+FG + + GV+V + D SA TG + V + +
Sbjct: 50 CGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRK 109
Query: 116 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK--VFMM 173
SA + E + + V+ A + +G L +S + + V A F
Sbjct: 110 G-SAGSKLSPEDV----DEEYVKSADLVHSSGITLAISSTAKEAV-YKAFEIASNRSFDT 163
Query: 174 NLSAPFI-CEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230
N+ E K + K+L ++ ++ + +++ D ++ A S +
Sbjct: 164 NIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKII-----LGESDPDKAAKAFSDYA 218
Query: 231 KASEIRKRTAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 287
+ V+ G +V DGK + V + D GAGDA G FLS
Sbjct: 219 E-------IIVMKLGPKGAIVYYDGKKYYSSGYQV------PVEDVTGAGDALGGTFLSL 265
Query: 288 LVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
+ +E+ + S + + G P +
Sbjct: 266 YYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKD 301
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-28
Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVAN 116
A T++I IG D + + ++ K+A ++ Y + A TG A V G+ ++
Sbjct: 54 QADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQ-AFITVNAEGQNTIYVY 112
Query: 117 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMM 173
A E + + A + + V +I E A A+ ++
Sbjct: 113 GGANMTMTPEDVIN--AKDAIINADFV------VAQLEVPIPAIISAFEIAKAHGVTTVL 164
Query: 174 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233
N AP K ++L +D I NETEA S ++ +++ A
Sbjct: 165 NP-APA-----KALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFL------ 212
Query: 234 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 293
I +T +IT G A + + K +DT AGD F+G F+S+L + +
Sbjct: 213 SIGIKTVLITLGKQGTYFATKNQSQHIEA---YKVNAIDTTAAGDTFIGAFVSRLNKSQD 269
Query: 294 -IEECVRAGCYTSHVIIQRSG 313
+ + + G S + +Q+ G
Sbjct: 270 NLADAIDFGNKASSLTVQKHG 290
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-28
Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 42/260 (16%)
Query: 62 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSA 119
++ CIG D + + + +N + G+ + S TG A V G+ ++ A
Sbjct: 68 GCRFVTCIGNDDYSDLLIENYEKLGITGYI--RVSLPTGR-AFIEVDKTGQNRIIIFPGA 124
Query: 120 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL------VAEHAAANNKVFMM 173
K E + + ++ +Q E A N + +
Sbjct: 125 NAELKKELIDW----NTLSESDIL------------LLQNEIPFETTLECAKRFNGIVIF 168
Query: 174 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233
+ AP + E++ Y+DY+ NE E SK E VE+ A K
Sbjct: 169 DP-APA-----QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFL------ 216
Query: 234 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 293
E+ + ++ G V++ + K FP K K VDT AGD F G F L + K
Sbjct: 217 ELGVKNVIVKLGDKGVLLVNKNEKKHFPT---FKVKAVDTTAAGDVFNGAFAVALSEGKN 273
Query: 294 IEECVRAGCYTSHVIIQRSG 313
EE V G + + + R G
Sbjct: 274 PEEAVIFGTAAAAISVTRLG 293
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-28
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 38/266 (14%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVAN 116
GA TS + +GKD FG + +N K ++ + Y+ + A+TGT A +V G+ +V
Sbjct: 75 GAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGT-ASIIVNNEGQNIIVIV 133
Query: 117 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMM 173
A +E L+ ++ +AK + ++P + A + +
Sbjct: 134 AGANLLLNTEDLRA--AANVISRAK------VMVCQLEITPATSLEALTMARRSGVKTLF 185
Query: 174 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233
N AP I + D NE+EA + + D E AL L
Sbjct: 186 NP-APAIADLDPQFYTLS----DVFCCNESEAEILTGLTVGSAADAGEAALVL------- 233
Query: 234 EIRK--RTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL- 288
+++ + +IT GA+ VV + + K P K K VDT GAGD+FVG L
Sbjct: 234 -LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPT---EKVKAVDTTGAGDSFVGALAFYLA 289
Query: 289 -VQEKPIEECVRAGCYTSHVIIQRSG 313
+E+ + + + V +Q +G
Sbjct: 290 YYPNLSLEDMLNRSNFIAAVSVQAAG 315
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 7e-28
Identities = 54/279 (19%), Positives = 98/279 (35%), Gaps = 39/279 (13%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLV--A 115
G +IGC+G D G +++ + GV+V + D ++ + + GERS
Sbjct: 65 GECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAV-LIVNLTADGERSFTYLV 123
Query: 116 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--VF 171
+ A + L + ++FY + LT P ++ A +F
Sbjct: 124 HPGADTYVSPQDL------PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLF 177
Query: 172 MMNLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
+NL + + + + + + E S ++ L
Sbjct: 178 DVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLS-----GASHWQDARYYLR-- 230
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289
++ T +I+ GAD ++ FP P+ +VDT GAGDAFVGG L L
Sbjct: 231 ----DLGCDTTIISLGADGALLITAEGEFHFPA---PRVDVVDTTGAGDAFVGGLLFTLS 283
Query: 290 Q-----EKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
+ + E + + + G P +
Sbjct: 284 RANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 8e-28
Identities = 54/278 (19%), Positives = 100/278 (35%), Gaps = 43/278 (15%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVC----VVGGERSLV--A 115
S I +G D+FG+ + + S+ G++ + D + TG + + LV
Sbjct: 50 CSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGI-YFIQRGYPIPMKSELVYYR 108
Query: 116 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNKVFM 172
SA + E + N V ++ + G L +S ++ + V E A +
Sbjct: 109 KGSAGSRLSPEDI----NENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR--SLD 162
Query: 173 MNLSAPF--ICEFFKDALEKVLPYMD--YIFGNETEARTFSKVQGWETDDVEEIALKLSQ 228
N+ E K+ + +L D + + + + + D +E K
Sbjct: 163 TNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKIL-----LDVTDPDEAYRKYK- 216
Query: 229 WPKASEIRKRTAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285
E+ + + G+ + +D + V + D GAGDA G F+
Sbjct: 217 -----ELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV------PVEDPTGAGDAMAGTFV 265
Query: 286 SQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
S +Q K IE + G S ++I G P +
Sbjct: 266 SLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLED 303
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-27
Identities = 57/277 (20%), Positives = 100/277 (36%), Gaps = 44/277 (15%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG--GERSLV---A 115
++G +G+D+ G +++ + GV++ ++ TG + G+ +
Sbjct: 48 VKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGL-YLREYLPLGQGRVFYYRK 106
Query: 116 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK--V 170
SA + + +E ++ +++G +SP++ E A
Sbjct: 107 G-SAGSALAPGAF----DPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVS 161
Query: 171 FMMNLSAPF-ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
+N E + LE+ LP +D +F +E EA VEE LS
Sbjct: 162 LDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELL-------FGRVEEALRALSA- 213
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFLS 286
V+ +GA DG+ F V VD GAGDAF G+L+
Sbjct: 214 --------PEVVLKRGAKGAWAFVDGRRVEGSAFAVEA------VDPVGAGDAFAAGYLA 259
Query: 287 QLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
V P+EE +R + G P + +
Sbjct: 260 GAVWGLPVEERLRLANLLGASVAASRGDHEGAPYRED 296
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-26
Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 42/263 (15%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCV-VGGERSLV---- 114
G S G +G D+ G + ++ +G++ A + + + GER +V
Sbjct: 81 GRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYD 140
Query: 115 ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLVAEHAAANNKVFM 172
L + + L P+ V A A K +
Sbjct: 141 HRLHEK--------------KRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAI 186
Query: 173 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232
++ + LE + P +I +E A + + + V+++ L
Sbjct: 187 LDG-DVAP----VETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDMLPVL-----H 231
Query: 233 SEIRKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 290
+ + +T G + D + + + VDT AGD F G F + +
Sbjct: 232 ARYPQTFIAVTAGPAGCWWTEADDPTVHFQTT---MQVEAVDTLAAGDIFHGTFALAMAE 288
Query: 291 EKPIEECVRAGCYTSHVIIQRSG 313
VR + + G
Sbjct: 289 GMQSRAAVRLSSVAAALKCTVFG 311
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 4e-25
Identities = 47/268 (17%), Positives = 80/268 (29%), Gaps = 65/268 (24%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLV---- 114
GA + G G D +++ + + V + +GT + V E +++
Sbjct: 70 GAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPG 129
Query: 115 AN--LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNK 169
AN L+ + V LT + + A A + +
Sbjct: 130 ANAHLTPV-------------PSAVANCD------VLLTQLEIPVATALAAARAAQSADA 170
Query: 170 VFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
V M+N +P + + +L+ + D + NE EA +
Sbjct: 171 VVMVNA-SPAGQD--RSSLQDLAAIADVVIANEHEANDWPSP------------------ 209
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289
VIT G + + P P VDT GAGD F G +
Sbjct: 210 -------PTHFVITLGVRGARYVGADGVFEVPA---PTVTPVDTAGAGDVFAGVLAANWP 259
Query: 290 Q----EKPIEECVRAGCYTSHVIIQRSG 313
+ +R C + SG
Sbjct: 260 RNPGSPAERLRALRRACAAGALATLVSG 287
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 4e-25
Identities = 46/260 (17%), Positives = 89/260 (34%), Gaps = 48/260 (18%)
Query: 61 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANLS 118
G T I G D G +++ K + + + + T + G+ +++ +
Sbjct: 53 GIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTA 112
Query: 119 AANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNL 175
AA+ + + + + A L S D + + ++A + + N
Sbjct: 113 AADTFSLDEMIP--HMADAVAGD------ILLQQGNFSLDKTRALFQYARSRGMTTVFNP 164
Query: 176 SAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235
+P + P +D NE+EA L +
Sbjct: 165 -SP-----VNPDFCHLWPLIDIAVVNESEAEL------------------LQPYG----- 195
Query: 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KP 293
+T VITQGA + Q+G+ + P + +DT GAGD F+ L+ + P
Sbjct: 196 -VKTLVITQGAAGAWLVQEGQRQFCPA---VPAEALDTTGAGDTFLAVMLASALLRGVAP 251
Query: 294 IEECVRAGCYTSHVIIQRSG 313
+ + + + R G
Sbjct: 252 DALALAHASRAAAITVSRRG 271
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 5e-25
Identities = 52/273 (19%), Positives = 93/273 (34%), Gaps = 39/273 (14%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSL--VANL 117
+S I +G D FGE + + V+ +DE TG V + G S +
Sbjct: 48 VKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDD- 106
Query: 118 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNKV-FMMN 174
A + NW +VE+AK L +P +++ V + ++ + F +N
Sbjct: 107 VAYFNMTLNDI----NWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKGSSLIAFDVN 162
Query: 175 LSAPFIC---EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231
L E LE+ + D + +E E + +
Sbjct: 163 LRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLE-----NQGVEVKGS-------- 209
Query: 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ- 290
IT G + ++ + P +DT GAGDAF+ L +++
Sbjct: 210 ------MLTAITLGPKGCRLIKNETVVDVPS---YNVNPLDTTGAGDAFMAALLVGILKL 260
Query: 291 -EKPIEECVRAGCYTSHVIIQRSGCT-YPEKPE 321
+ + + + + Q+ G P K E
Sbjct: 261 KGLDLLKLGKFANLVAALSTQKRGAWSTPRKDE 293
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-24
Identities = 59/288 (20%), Positives = 92/288 (31%), Gaps = 44/288 (15%)
Query: 61 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVG--GERSLV--A 115
GA ++G +G D FG+ + + AGV +A T A + GERS
Sbjct: 51 GAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTAL-AFVALDAHGERSFSFYR 109
Query: 116 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNKVFMM 173
+A ++ EH A A F+ +T + + A A +
Sbjct: 110 PPAADLLFRVEHF----QDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSF 165
Query: 174 --NLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229
N E L K L D + + E + D + +L Q
Sbjct: 166 DLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLA---NTLAADANAVIQQLWQG 222
Query: 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 289
+ ++T A PV + P + ++ D+N AGDAFVGG L
Sbjct: 223 RA------QLLLVTDAAGPVHWYTRTAGGEVPT---FRVQVQDSNAAGDAFVGGMLYTFA 273
Query: 290 Q--------------EKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 321
Q + I +R + + R G P E
Sbjct: 274 QQFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSE 321
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 5e-24
Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 31/256 (12%)
Query: 66 IGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVG-GERSLVANLSAANCY 123
+G +G D FG+E ++ E T A + + N +
Sbjct: 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLD-TQLNVF 106
Query: 124 KSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEF 183
P+ + + + P+ V + V + F E
Sbjct: 107 AEFDPHVPQYYRDSKFV-------CLGNIDPELQLKVLDQIDDPKLVVCDTM--NFWIEG 157
Query: 184 FKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243
+ L+KVL +D N++EAR S ++ + A + + +T +I
Sbjct: 158 KPEELKKVLARVDVFIVNDSEARLLS-----GDPNLVKTARIIREM------GPKTLIIK 206
Query: 244 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ-----EKPIEECV 298
+G ++ D + P P + + D GAGD F GGF+ L + E + + V
Sbjct: 207 KGEHGALLFTDNGIFAAPAF--PLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAV 264
Query: 299 RAGCYTSHVIIQRSGC 314
G + +++ G
Sbjct: 265 LYGSAMASFCVEQFGP 280
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-18
Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 34/264 (12%)
Query: 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANL---- 117
T+ I + ++ GE K + G++ + ++ G+ + G + V
Sbjct: 51 TALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQ 110
Query: 118 SAANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK--VF 171
SA +++ ++ A + + +I G L+++ + A+ A A K F
Sbjct: 111 SAFGISEAKDY----DFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCF 166
Query: 172 MMNLSAPFI----CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE----EIA 223
N F + E++LPY D +FG+ + E + E E+
Sbjct: 167 DFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELI 226
Query: 224 LKLSQWPKASEI--RKRTAVITQGADPVVVAQDGKL---KKFPVIVLPKDKLVDTNGAGD 278
+ R+ Q + + +K P++ +D GAGD
Sbjct: 227 QRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLN------LDRIGAGD 280
Query: 279 AFVGGFLSQLVQEKPIEECVRAGC 302
A+ G L Q +E+ V
Sbjct: 281 AYAAGILYGYSQNWSLEKAVTFAT 304
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 52/324 (16%), Positives = 106/324 (32%), Gaps = 44/324 (13%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQN-SIRVAQWMLQIPGA-TS 64
++ G +L +S ++V Y GGA N + +AQ G
Sbjct: 15 VVTFGEIMLRLSPPDHKRI-----FQTDSFDVTY--GGAEANVAAFLAQM-----GLDAY 62
Query: 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV-CVVGGERSLVA---NLSAA 120
++ + + G+ + + GV Y G + S V SA
Sbjct: 63 FVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAI 122
Query: 121 NCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK--VFMMN 174
+ K E +W +++ A++F+ +G + + ++ + A +N
Sbjct: 123 SEAKREDF----DWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLN 178
Query: 175 LSAPFI-CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233
A E + + + Y+D + NE + + D + + A
Sbjct: 179 YRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAE 238
Query: 234 EIRK----RTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 281
E+ + +T IT +V ++G+ + +VD GAGD+F
Sbjct: 239 EVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGDSFA 295
Query: 282 GGFLSQLVQEKPIEECVRAGCYTS 305
G + + ++ S
Sbjct: 296 GALIYGSLMGFDSQKKAEFAAAAS 319
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 14/91 (15%)
Query: 215 ETDDVEEIALKLSQWPKASEIRKRTA---VITQGAD-PVVVAQDGKLKKFPVIVLPKDKL 270
+ + + ++ VI+ G D + D + P +
Sbjct: 200 SENPLAAVQ------TALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKI----PTIQA 249
Query: 271 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301
+ G+GDA + G L ++ P E ++ G
Sbjct: 250 KNPVGSGDATIAGLAYGLAKDAPAAELLKWG 280
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 201 NETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-PVVVAQDGKLKK 259
N+ E + + DDV + A ++ KA + V++ G + V + ++
Sbjct: 187 NQKELSALVNRELTQPDDVRKAAQEIVNSGKA-----KRVVVSLGPQGALGVDSENCIQV 241
Query: 260 FPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301
P P K T GAGD+ VG +L + +EE VR G
Sbjct: 242 VP----PPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFG 279
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 24/154 (15%)
Query: 152 VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM-DYIFGNETEARTFSK 210
+ + + + A A + +AL +VL +I N E
Sbjct: 139 MPQTIYRSMTQIAKERG--------AFVAVDTSGEALHEVLAAKPSFIKPNHHELSELVS 190
Query: 211 VQGWETDDVEEIALKLSQWPKASEIRK--RTAVITQGAD-PVVVAQDGKLKKFPVIVLPK 267
+D +L I + + +++ D + + +G P
Sbjct: 191 KPIASIEDAIPHVQRL--------IGEGIESILVSFAGDGALFASAEGMFHVNV----PS 238
Query: 268 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301
++ ++ GAGD+ V GFL+ L + K +E+ V
Sbjct: 239 GEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFA 272
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 152 VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM-DYIFGNETEARTFSK 210
+ D+ +A+ A A + + K+ E VLPY +I N+ E
Sbjct: 139 IPSDAYAQIAQITAQTG--------AKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFN 190
Query: 211 VQGWETDDVEEIALKLSQWPKASEIRK--RTAVITQGAD-PVVVAQDGKLKKFPVIVLPK 267
DV + L + K ++ +++ G D + + ++ +K P+
Sbjct: 191 TTVNSDADVIKYGRLL--------VDKGAQSVIVSLGGDGAIYIDKEISIKAVN----PQ 238
Query: 268 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301
K+V+T G+GD+ V G ++ + IE+ +
Sbjct: 239 GKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQA 272
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 7e-07
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 232 ASEIRKRTA---VITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 287
S+ +++ GA + P +++ G+GD+ V G S
Sbjct: 228 VSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNI----PTISVLNPVGSGDSTVAGITSA 283
Query: 288 LVQEKPIEECVRAG 301
++ + + ++
Sbjct: 284 ILNHENDHDLLKKA 297
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 9e-07
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 238 RTAVITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 296
V++ GA + + P PK + + GAGD FVG F++ L PI E
Sbjct: 216 PYLVVSLGAKGSICAHNGKLYQVIP----PKVQERNDTGAGDVFVGAFIAGLAMNMPITE 271
Query: 297 CVRAG 301
++
Sbjct: 272 TLKVA 276
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 1e-05
Identities = 49/329 (14%), Positives = 93/329 (28%), Gaps = 72/329 (21%)
Query: 16 DISSVVDDDFLNKYD---------EMASKYNVEYIAG-GATQNSIRVAQWMLQIPGATSY 65
DI SV +D F++ +D + SK +++I + W L
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV 79
Query: 66 IGCIGKDKF-GEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSLVAN----LSA 119
KF E ++ N K + S T R + N +
Sbjct: 80 ------QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ-----RDRLYNDNQVFAK 128
Query: 120 ANCYKSEHLKKPENWAL-VEKAKYFYI---AGFFLTVSPDSIQLVAE-------HAAANN 168
N + + K L + AK I G T + + +
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW------VALDVCLSYKVQCKMDF 182
Query: 169 KVFMMNLSAPFICEFFKDALEKVLPYMD--YIFGNETEARTFSKVQGWET---------- 216
K+F +NL E + L+K+L +D + ++ + ++ +
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242
Query: 217 --------DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKD 268
+V+ W A + + + T+ V +
Sbjct: 243 YENCLLVLLNVQNAKA----W-NAFNLSCKILLTTRFKQ-VTDFLSAATTTHISLDHHSM 296
Query: 269 KLVDTNGAGDAFVGGFLSQLVQEKPIEEC 297
L T + + +L Q+ P E
Sbjct: 297 TL--TPDEVKSLLLKYLDCRPQDLPREVL 323
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 232 ASEIRKR--TAVITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 288
A ++ ++ +V++ +V ++G + GAGDA+V G +
Sbjct: 227 AEKLAEKSQVSVVSYEVKNDIVATREGVWLIRSK---EEIDTSHLLGAGDAYVAGMVYYF 283
Query: 289 VQE-KPIEECVRAG 301
++ E + G
Sbjct: 284 IKHGANFLEMAKFG 297
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} PDB: 1td2_A* 1vi9_A* Length = 289 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 33/183 (18%)
Query: 153 SPDSIQLVAEHAAANNKVFMMNLSAPFIC---------------EFFKDALEKVLPYMDY 197
SP+ + A +V N A + C + + LP D
Sbjct: 88 SPEQGSHILAAVA---QVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDM 144
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP--------V 249
I N E S + + ++A L + ++ + +
Sbjct: 145 IAPNLLELEQLSGERVENVEQAVQVARSLC------ARGPKVVLVKHLSRAGYHADCFEM 198
Query: 250 VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309
++ ++ K G GD G L L++ +P+++ + + ++
Sbjct: 199 LLVTADDAWHICRPLVDFGK-RQPVGVGDLTSGLLLVNLLKGEPLDKALEHVTAAVYEVM 257
Query: 310 QRS 312
++
Sbjct: 258 LKT 260
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 100.0 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 100.0 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 100.0 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.92 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.91 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.89 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.86 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.82 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.81 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.81 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.76 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.76 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.66 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.56 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 99.3 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 98.97 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 98.96 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 98.95 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.78 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.64 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 98.52 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 98.38 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.27 | |
| 1ua4_A | 455 | Glucokinase, ADP-dependent glucokinase; transferas | 97.96 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 97.64 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 97.49 | |
| 1gc5_A | 467 | ADP-dependent glucokinase; ALFA/beta sandwichs, in | 96.41 |
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-54 Score=386.00 Aligned_cols=320 Identities=37% Similarity=0.663 Sum_probs=280.9
Q ss_pred cceEEEeCCceeeeEeecChh------------------HHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEE
Q 020650 4 EGILLGMGNPLLDISSVVDDD------------------FLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 65 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~------------------~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~ 65 (323)
+.+|+++|++++|++..++.. .+|.+++..........+||++.|+|.++++|++.|.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 458999999999999999931 27888999999999999999999999999985444599999
Q ss_pred EeeeecCchhHHHHHHHHHcCceeEEeec-CCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEE
Q 020650 66 IGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 144 (323)
Q Consensus 66 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 144 (323)
+|.+|+|.+|+.+++.|++.||+++++.. ++.+|+.+++++++|+|+++.+.+++..++++++......+.+++++++|
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v~ 183 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYY 183 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEEE
Confidence 99999999999999999999999999875 77899999998888899998888888889988887643456789999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHH
Q 020650 145 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 224 (323)
Q Consensus 145 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~ 224 (323)
++|+.+.++++.+..+++.++++++++++|++.+.|.+...+.+..+++++|++++|++|++.+++..+.+.++++++++
T Consensus 184 ~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~ 263 (370)
T 3vas_A 184 IAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 263 (370)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHH
T ss_pred EEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHH
Confidence 99988777788999999999999999999999888777677788899999999999999999999987766678899999
Q ss_pred HHhcCCccccC-CccEEEEeeCCCceEEee--CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHH
Q 020650 225 KLSQWPKASEI-RKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301 (323)
Q Consensus 225 ~l~~~~~~~~~-~~~~vvit~G~~G~~~~~--~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A 301 (323)
.+.++.+.... +++.++||+|++|+++++ +++.+++++++++..+++||+||||+|.|||+++|++|+++++|+++|
T Consensus 264 ~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~A 343 (370)
T 3vas_A 264 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 343 (370)
T ss_dssp HHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 88431100013 789999999999999998 778888887765555899999999999999999999999999999999
Q ss_pred hHHHHHHhhhcCccCCCCCCCC
Q 020650 302 CYTSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 302 ~~~Aa~~~~~~G~~~p~~~~~~ 323 (323)
+++|+++|++.|+.+|..++|+
T Consensus 344 ~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 344 VKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp HHHHHHHHTSSSSCCCCGGGGC
T ss_pred HHHHHHHHcccCCcCCCCccce
Confidence 9999999999999999988764
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-53 Score=382.74 Aligned_cols=319 Identities=49% Similarity=0.894 Sum_probs=275.1
Q ss_pred ceEEEeCCceeeeEeecChhH------------------HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEE
Q 020650 5 GILLGMGNPLLDISSVVDDDF------------------LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~ 66 (323)
.+|+++|++++|++..+++.+ +|.+++.+........+||++.|+|.++++|.++|.++.++
T Consensus 24 ~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~i 103 (365)
T 3loo_A 24 GMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFF 103 (365)
T ss_dssp TSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEE
T ss_pred ccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEE
Confidence 479999999999999999843 36678888877889999999999999999865567999999
Q ss_pred eeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEe
Q 020650 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 146 (323)
Q Consensus 67 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 146 (323)
|.+|+|.+|+.+++.|++.||+++++..++.+|+++++++++++|+++.+.+++..++++++..+...+.+++++++|++
T Consensus 104 g~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i~ 183 (365)
T 3loo_A 104 GCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVS 183 (365)
T ss_dssp EEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEEE
T ss_pred EEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEEe
Confidence 99999999999999999999999998767778999998888888888888888888998888754445678899999999
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 020650 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 226 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l 226 (323)
|+.+..+++.+.++++.++++++++++|++.+.|.+...+.+..+++++|++++|++|++.+++..+.+.++++++++.+
T Consensus 184 G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l 263 (365)
T 3loo_A 184 GFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRI 263 (365)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred eeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHHH
Confidence 98877778889999999999999999999988877777788899999999999999999999998777778899999998
Q ss_pred hcCCccccCCccEEEEeeCCCceEEe--eCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 227 SQWPKASEIRKRTAVITQGADPVVVA--QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 227 ~~~~~~~~~~~~~vvit~G~~G~~~~--~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
.++.+....+++.+|||+|++|++++ ++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|+++
T Consensus 264 ~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~~ 343 (365)
T 3loo_A 264 AALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIWA 343 (365)
T ss_dssp HTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 43211111378999999999999999 7777888887655444799999999999999999999999999999999999
Q ss_pred HHHHhhhcCccCCCCCCCC
Q 020650 305 SHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 305 Aa~~~~~~G~~~p~~~~~~ 323 (323)
|+++|++.|+.+|..++|+
T Consensus 344 Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 344 AREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp HHHHHHHGGGGGGSCCCC-
T ss_pred HHHHHcCCCCCCCCCccCC
Confidence 9999999999999998874
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-53 Score=377.99 Aligned_cols=321 Identities=40% Similarity=0.719 Sum_probs=277.4
Q ss_pred ccceEEEeCCceeeeEeecChhH------------------HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCC-CCc-
Q 020650 3 QEGILLGMGNPLLDISSVVDDDF------------------LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQI-PGA- 62 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~-g~~- 62 (323)
+..+|+++|++++|++..+++.+ +|.+++..+.......+||++.|+|.++++|+++ |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 45689999999999999998632 4667888888889999999999999999983221 488
Q ss_pred EEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccE
Q 020650 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 142 (323)
Q Consensus 63 v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (323)
+.++|.+|+|.+|+.+++.|++.||+++++..++.+|+.+++++++|+|+++.+.++...++++++.....++.++++++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 99999999999999999999999999999877777899999888888999888888888888888876444567899999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHH
Q 020650 143 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222 (323)
Q Consensus 143 v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~ 222 (323)
+|++|+.+.++++.+.++++.++++++++++|++.+.|.+...+.+..+++++|++++|++|++.+++..+.+.++++++
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~ 245 (347)
T 3otx_A 166 FYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEI 245 (347)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHH
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHH
Confidence 99999988888899999999999999999999998887766778889999999999999999999998877777889999
Q ss_pred HHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHh
Q 020650 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 302 (323)
Q Consensus 223 ~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 302 (323)
++.+.++.+....+++.++||+|++|++++++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|+
T Consensus 246 ~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~ 325 (347)
T 3otx_A 246 ARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGH 325 (347)
T ss_dssp HHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99884321111468999999999999999998888888876655458899999999999999999999999999999999
Q ss_pred HHHHHHhhhcCccCCCCCCCC
Q 020650 303 YTSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 303 ~~Aa~~~~~~G~~~p~~~~~~ 323 (323)
++|+++|++.|+.+|.+++|.
T Consensus 326 ~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 326 YTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp HHHHHHHTCC----CCSCSCC
T ss_pred HHHHHHHcccCCCCCCCCCCC
Confidence 999999999999999998874
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=360.34 Aligned_cols=319 Identities=58% Similarity=1.034 Sum_probs=272.1
Q ss_pred cceEEEeCCceeeeEeecChhH------------------HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCC-CcEE
Q 020650 4 EGILLGMGNPLLDISSVVDDDF------------------LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GATS 64 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g-~~v~ 64 (323)
+++|+|+|++++|++..+++.. .|.+++.....+....+||++.|+|.++++|.+.+ .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 4589999999999999988721 67778888888999999999999999999842322 7999
Q ss_pred EEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcc-cCCCcchhhhhccccEE
Q 020650 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYF 143 (323)
Q Consensus 65 ~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v 143 (323)
++|.+|+|.+|+.+++.|+++||+++++..++.+|+.+++++++|+|+++.+.++...++++ +++.....+.+++++++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 165 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVC 165 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEE
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCEE
Confidence 99999999999999999999999999987667789999888887888877777777778887 77643334567899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHH
Q 020650 144 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 223 (323)
Q Consensus 144 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~ 223 (323)
|++++.+.++++.+..+++.+++.+.++++|++.+.|.+...+.++++++++|++++|++|++.+++....+.+++++++
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 245 (345)
T 1bx4_A 166 YIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 245 (345)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHH
Confidence 99998877788899999999999999999999887776555666788999999999999999999987665667899999
Q ss_pred HHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 224 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 224 ~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
+.+.++.+....+.+.+++|+|++|++++++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|++
T Consensus 246 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 325 (345)
T 1bx4_A 246 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHY 325 (345)
T ss_dssp HHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 88832100000488999999999999999877888888765544479999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccCCCCCCC
Q 020650 304 TSHVIIQRSGCTYPEKPEF 322 (323)
Q Consensus 304 ~Aa~~~~~~G~~~p~~~~~ 322 (323)
+|+.++++.|+.+|++++|
T Consensus 326 ~aa~~v~~~G~~~p~~~~~ 344 (345)
T 1bx4_A 326 AASIIIRRTGCTFPEKPDF 344 (345)
T ss_dssp HHHHHTTSSSSCCCSSCCC
T ss_pred HHHHHHhccCCCCCCcccC
Confidence 9999999999999998887
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=363.75 Aligned_cols=318 Identities=36% Similarity=0.655 Sum_probs=272.5
Q ss_pred eEEEeCCceeeeEeecChhHHh------------------hHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEe
Q 020650 6 ILLGMGNPLLDISSVVDDDFLN------------------KYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 67 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~------------------~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~ 67 (323)
.|++||+..+|++..++..++. .+++.....+....+||++.|+|+++++|.+.+..+.|+|
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG 107 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 107 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEE
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEe
Confidence 5999999999999999864433 2355666667788999999999999999544456699999
Q ss_pred eeecCchhHHHHHHHHHcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEe
Q 020650 68 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 146 (323)
Q Consensus 68 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 146 (323)
.||+|.+|+.+++.|++.||+++++. .++.+|+.+.+++++++|+++.+.++...+++++++.+..+..++.++++|++
T Consensus 108 ~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~~~ 187 (372)
T 3uq6_A 108 CIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIA 187 (372)
T ss_dssp EECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEEE
T ss_pred eecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEEEe
Confidence 99999999999999999999999975 46668888888888999999999999999999999876667788999999999
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 020650 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 226 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l 226 (323)
|+.+...++.+.++++.+++.+.++.+|++.+.+.+..++.+..+++++|++++|++|++.+++..+...++.++.++.+
T Consensus 188 g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l 267 (372)
T 3uq6_A 188 GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYI 267 (372)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHH
Confidence 98776667888999999999999999999988877777888999999999999999999999998887777888888887
Q ss_pred hcCCcc-ccCCccEEEEeeCCCceEEeeCCe--eeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 227 SQWPKA-SEIRKRTAVITQGADPVVVAQDGK--LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 227 ~~~~~~-~~~~~~~vvit~G~~G~~~~~~~~--~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
.++... ...+.+.+++|+|++|++++++++ ...++.++.+..++||||||||+|.|||+|+|++|+++++|+++|++
T Consensus 268 ~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 347 (372)
T 3uq6_A 268 ADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAVK 347 (372)
T ss_dssp HHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 543221 234678899999999999987653 34455444555689999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccCCCCCCCC
Q 020650 304 TSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 304 ~Aa~~~~~~G~~~p~~~~~~ 323 (323)
+|+.+|++.|+++|.+++++
T Consensus 348 aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 348 AAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp HHHHHHTSSSSCCCCGGGCC
T ss_pred HHHHHHcCCCCCCCChhHHH
Confidence 99999999999999988864
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-48 Score=348.74 Aligned_cols=306 Identities=34% Similarity=0.555 Sum_probs=252.7
Q ss_pred CccceEEEeCCceeeeEeecChhHH----hhHHHHh-------------hcCCceeecCchHHHHHHHHHHhcCCCCcEE
Q 020650 2 AQEGILLGMGNPLLDISSVVDDDFL----NKYDEMA-------------SKYNVEYIAGGATQNSIRVAQWMLQIPGATS 64 (323)
Q Consensus 2 ~~~~~i~viG~~~iD~~~~~~~~~~----~~~~~~~-------------~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~ 64 (323)
+++++|+|+|++++|++..+++.++ |.+++.+ +.......+||++.|+|.+|++|.+.|.++.
T Consensus 30 ~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~ 109 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAG 109 (383)
T ss_dssp CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEE
T ss_pred CCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEE
Confidence 4467999999999999999876221 2222221 4556788999999999999998543349999
Q ss_pred EEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEE
Q 020650 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 144 (323)
Q Consensus 65 ~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 144 (323)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.++...+++++ ...+.+++++++|
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~~----~~~~~l~~~~~v~ 185 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPE----DWTTFASGALIFY 185 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCT----THHHHTTTCCEEE
T ss_pred EEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChhh----hhHHHhhcCCEEE
Confidence 999999999999999999999999999876667899999888878888777777766666551 2345678999999
Q ss_pred EeccccccCHHHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCC--------
Q 020650 145 IAGFFLTVSPDSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE-------- 215 (323)
Q Consensus 145 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~-------- 215 (323)
++++.+.++++.+..+++.+++ .++++++|++.+.|.+...+.++++++++|++++|++|++.|++..+..
T Consensus 186 ~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~s 265 (383)
T 2abs_A 186 ATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALS 265 (383)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC--------
T ss_pred EeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccccc
Confidence 9998877788899999999998 8999999999877765556677889999999999999999998865432
Q ss_pred ----CCCHHHHHHHHhcCCcccc------C-CccEEEEeeCCCceEEe-----eCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 216 ----TDDVEEIALKLSQWPKASE------I-RKRTAVITQGADPVVVA-----QDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 216 ----~~~~~~~~~~l~~~~~~~~------~-~~~~vvit~G~~G~~~~-----~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
.++++++++.+ .. . +.+.++||+|++|++++ ++++.++++++++++.+++||+||||+
T Consensus 266 ~~~~~~~~~~~a~~l------~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDa 339 (383)
T 2abs_A 266 TANKEHAVEVCTGAL------RLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDA 339 (383)
T ss_dssp --CHHHHHHHHHHHH------HHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHH
T ss_pred cccccccHHHHHHHH------HhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHH
Confidence 23456777777 33 3 78999999999999998 555677777654444478999999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
|.|||+++|++|+++++|+++|+++|+++|++.|+.+|
T Consensus 340 F~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 340 FVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 99999999999999999999999999999999999866
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=346.69 Aligned_cols=292 Identities=21% Similarity=0.272 Sum_probs=253.1
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHh-hcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMA-SKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
++|+|+|++++|++..+++ +|.+++.. +.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 3 ~~v~viG~~~~D~~~~~~~--~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~-lG--~~~~~~~~vG~D~~g~~i~~~l~ 77 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVER--YAQPGETLHVEEAQKAFGGGKGANQAIATAR-MQ--ADTTFITKIGTDGVADFILEDFK 77 (304)
T ss_dssp CEEEEECCCEEEEEEECSS--CCCTTCCCCCSSCCEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSCTTHHHHHHHH
T ss_pred CcEEEEccceeEEEEeccC--CCCCCCceecccceeecCCCHHHHHHHHHHH-CC--CCeEEEEEeCCChHHHHHHHHHH
Confidence 5899999999999999998 77777777 7788899999999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 161 (323)
++||+++++. .++.+|+.+++.++ +|+++++.+.++...+++++++. ..+.+++++++++++ ..+.+.+..++
T Consensus 78 ~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~~~~ 152 (304)
T 3ry7_A 78 VAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVIN--AKDAIINADFVVAQL---EVPIPAIISAF 152 (304)
T ss_dssp HTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHT--THHHHHTCSEEEEET---TSCHHHHHHHH
T ss_pred HcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHH--HHHHhccCCEEEEcC---CCCHHHHHHHH
Confidence 9999999985 57788999998887 68888887888777788777654 345688999999975 45678899999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAV 241 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv 241 (323)
+.+++++.++++|+.... +....+++++|++++|++|++.+++....+.++++++++.+ .+.+.+.++
T Consensus 153 ~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vv 220 (304)
T 3ry7_A 153 EIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYF------LSIGIKTVL 220 (304)
T ss_dssp HHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHH------HHTTCCEEE
T ss_pred HHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCCEEE
Confidence 999999999999997531 22457889999999999999999886443334677888888 667899999
Q ss_pred EeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC-CCHHHHHHHHhHHHHHHhhhcCcc--CCC
Q 020650 242 ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE-KPIEECVRAGCYTSHVIIQRSGCT--YPE 318 (323)
Q Consensus 242 it~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g-~~~~~a~~~A~~~Aa~~~~~~G~~--~p~ 318 (323)
+|+|++|++++++++.++++++++ +++||+||||+|.|+|+++|++| +++++|+++|+++|++++++.|+. .|+
T Consensus 221 vt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~ 297 (304)
T 3ry7_A 221 ITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPL 297 (304)
T ss_dssp EECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCCCCTGGGCCC
T ss_pred EEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCccccCCC
Confidence 999999999998888888887544 78999999999999999999999 999999999999999999999994 577
Q ss_pred CCC
Q 020650 319 KPE 321 (323)
Q Consensus 319 ~~~ 321 (323)
++|
T Consensus 298 ~~e 300 (304)
T 3ry7_A 298 LEE 300 (304)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-47 Score=336.92 Aligned_cols=294 Identities=25% Similarity=0.396 Sum_probs=250.7
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHH----H------------HhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEe
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYD----E------------MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 67 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~----~------------~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~ 67 (323)
+++|+|+|++++|++..++..++++.+ . ..........+||++.|+|.++++ +| .++.++|
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~ig 101 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVAN-LG--GKAAYFG 101 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHH-HT--CCEEEEC
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHH-cC--CCeEEEE
Confidence 469999999999999999985543321 0 111234467999999999999998 66 9999999
Q ss_pred eeecCchhHHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEE
Q 020650 68 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 145 (323)
Q Consensus 68 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 145 (323)
.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++..+.++...++++++.. +.+++++++|+
T Consensus 102 ~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~~~v~~ 177 (352)
T 4e3a_A 102 NVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA----DVVADAKVTYF 177 (352)
T ss_dssp CCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHHTEEEEEE
T ss_pred EECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH----HHHhhCCEEEE
Confidence 99999999999999999999999986 46678999998887 79999888888888888888763 66889999999
Q ss_pred ecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHHhhcCCCCCCHHH
Q 020650 146 AGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEE 221 (323)
Q Consensus 146 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~~~~~~~~~~~~~ 221 (323)
+|+.+ ..+.+.+.++++.+++.+.++++|++.+.+.+...+.+.++++ ++|++++|++|++.+++ .+++++
T Consensus 178 ~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g-----~~~~~~ 252 (352)
T 4e3a_A 178 EGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ-----TDDFEE 252 (352)
T ss_dssp EGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT-----CSCHHH
T ss_pred eeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC-----CCCHHH
Confidence 99863 2345788999999999999999999887666666777888998 89999999999999987 357888
Q ss_pred HHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHH
Q 020650 222 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301 (323)
Q Consensus 222 ~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A 301 (323)
+++.+ .. +.+.++||+|++|++++++++.+++++++++ +++|||||||+|.|||+++|.+|+++++|+++|
T Consensus 253 a~~~l------~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~A 323 (352)
T 4e3a_A 253 ALNRI------AA-DCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLG 323 (352)
T ss_dssp HHHHH------HH-HSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHH------hc-CCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88877 33 5789999999999999999998888875441 489999999999999999999999999999999
Q ss_pred hHHHHHHhhhcCccCCC
Q 020650 302 CYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 302 ~~~Aa~~~~~~G~~~p~ 318 (323)
+++|+++|++.|+.+|.
T Consensus 324 ~~aAa~~v~~~G~~~~~ 340 (352)
T 4e3a_A 324 CLAAGIVIQQIGPRPMT 340 (352)
T ss_dssp HHHHHHHTTSSSSSCSS
T ss_pred HHHHHHHHcCCCCCCCc
Confidence 99999999999997543
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-48 Score=339.00 Aligned_cols=296 Identities=23% Similarity=0.321 Sum_probs=248.3
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++..+++ +|.+++..........+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 m~~~~~v~viG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~N~A~~la~-lG--~~~~~~~~vG~D~~g~~i~~ 75 (309)
T 1rkd_A 1 MQNAGSLVVLGSINADHILNLQS--FPTPGETVTGNHYQVAFGGKGANQAVAAGR-SG--ANIAFIACTGDDSIGESVRQ 75 (309)
T ss_dssp ---CCEEEEECCCEEEEEEECSS--CCCTTCCCCCCCEEEEEECHHHHHHHHHHH-HT--CEEEEEEEEESSTTHHHHHH
T ss_pred CCCCCeEEEECcceEeEEEecCC--CCCCCCeeecCceeecCCCHHHHHHHHHHh-CC--CceEEEEEECCCHHHHHHHH
Confidence 77677999999999999999988 777777777778889999999999999998 66 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
.|+++||+++++. .++.+|+.++++++ +|+|+++.+.+++..+++++++. ..+.++.++++++++ ..+.+.+.
T Consensus 76 ~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~ 150 (309)
T 1rkd_A 76 QLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANASALLMQL---ESPLESVM 150 (309)
T ss_dssp HHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSEEEECS---SSCHHHHH
T ss_pred HHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHH--HHHhcccCCEEEEeC---CCCHHHHH
Confidence 9999999999986 46778999998887 58888877777776777766643 335678899999975 34668888
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
.+++.+++.+.++++|+.... +....+++++|++++|++|++.+++....+.++++++++.+ .+.+.+
T Consensus 151 ~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 218 (309)
T 1rkd_A 151 AAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVL------HEKGIR 218 (309)
T ss_dssp HHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHH------HHTTCS
T ss_pred HHHHHHHHcCCEEEEECCccc------cchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHH------HHhCCC
Confidence 999999999999999997531 11246789999999999999999875332224566777887 567889
Q ss_pred EEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--C
Q 020650 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--Y 316 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~ 316 (323)
.+++|+|++|++++++++.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.|+. +
T Consensus 219 ~vvvt~G~~G~~~~~~~~~~~~~~~~---v~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~ 295 (309)
T 1rkd_A 219 TVLITLGSRGVWASVNGEGQRVPGFR---VQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSV 295 (309)
T ss_dssp EEEEECGGGCEEEEETTEEEEECCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGC
T ss_pred EEEEEECCCcEEEEeCCceEEcCCCC---CCcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCccCCC
Confidence 99999999999999888888887654 378999999999999999999999999999999999999999999984 6
Q ss_pred CCCCC
Q 020650 317 PEKPE 321 (323)
Q Consensus 317 p~~~~ 321 (323)
|+++|
T Consensus 296 p~~~e 300 (309)
T 1rkd_A 296 PWREE 300 (309)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 77654
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-47 Score=336.30 Aligned_cols=292 Identities=21% Similarity=0.304 Sum_probs=233.7
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCC--CCcEEEEeeeecCchhHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQI--PGATSYIGCIGKDKFGEEM 78 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~--g~~v~~~~~vG~D~~g~~i 78 (323)
|+|+++|+|+|++++|++...+ .....+||++.|+|.++++ +|. +.++.++|.+|+|.+|+.+
T Consensus 1 m~m~~~i~viG~~~~D~~~~~~--------------~~~~~~GG~~~NvA~~la~-LG~~~~~~~~~ig~vG~D~~G~~l 65 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKGA--------------DVKRGFGGDTLNTSVYIAR-QVDPAALTVHYVTALGTDSFSQQM 65 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------------CCEEEEECHHHHHHHHHHT-TSCTTTEEEEEECEECSSHHHHHH
T ss_pred CCccCceeeechhhhhhccCCC--------------ceEEecCChHHHHHHHHHH-cCCCCCCcEEEEEEeCCCHHHHHH
Confidence 8888899999999999986432 3678999999999999997 331 1799999999999999999
Q ss_pred HHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeeccccc---ccCCcccCCCcchhhhhccccEEEEeccccc-c
Q 020650 79 KKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAA---NCYKSEHLKKPENWALVEKAKYFYIAGFFLT-V 152 (323)
Q Consensus 79 ~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~-~ 152 (323)
++.|++.||+++++. .++.+|+.+++.++ +|+|+++.+.+.. ..+++++++ ...+.++++|++|++++.+. +
T Consensus 66 ~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~~g~~~~~l 143 (319)
T 3lhx_A 66 LDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSA--AICEELANFDYLYLSGISLAIL 143 (319)
T ss_dssp HHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHH--HHHHHHTTCSEEEEEHHHHHTS
T ss_pred HHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchh--hHHHHhcCCCEEEEcCchhhhc
Confidence 999999999999985 46678999988876 7888887665432 233333332 23466889999999987653 2
Q ss_pred C---HHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHH
Q 020650 153 S---PDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225 (323)
Q Consensus 153 ~---~~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~ 225 (323)
+ .+.+.++++.+++.+.++++|+.. ..|. +...+.++.+++.+|++++|.+|++.+++ .++++++++.
T Consensus 144 ~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g-----~~~~~~~~~~ 218 (319)
T 3lhx_A 144 SPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWG-----QQPVEDVIAR 218 (319)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHC-----CCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhC-----CCCHHHHHHH
Confidence 3 367889999999999999999963 2231 23456678899999999999999999987 3578888998
Q ss_pred HhcCCccccCCccEEEEeeCCCceEEeeCCeee-EEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 226 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLK-KFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 226 l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~-~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
+ .+.|++.++||+|++|++++++++.+ +++++++++++++||+||||+|.|+|+++|++|+++++|+++|+++
T Consensus 219 l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 292 (319)
T 3lhx_A 219 T------HNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLT 292 (319)
T ss_dssp H------HHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred H------HhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8 66789999999999999999877654 7777544456899999999999999999999999999999999999
Q ss_pred HHHHhhhcCccCCCCC
Q 020650 305 SHVIIQRSGCTYPEKP 320 (323)
Q Consensus 305 Aa~~~~~~G~~~p~~~ 320 (323)
|+.++++.|+.+|...
T Consensus 293 aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 293 ASTVIQYRGAIIPREA 308 (319)
T ss_dssp HHHHTTSSSSSCCGGG
T ss_pred HHhhhccCCCcCCCCC
Confidence 9999999999877653
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=340.60 Aligned_cols=298 Identities=24% Similarity=0.300 Sum_probs=248.2
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+.+++|+|+|++++|++..+++ +|.+++..........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~l~~ 95 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSR--LPKTGETIHGHKFFIGFGGKGANQCVQAAR-LG--AMTSMVCKVGKDSFGNDYIE 95 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSS--CCCTTCCCCCSEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHH
T ss_pred ccccCCEEEECcccEEEEEecCC--CCCCCceEecCceEECcCCHHHHHHHHHHH-CC--CCeEEEEEECCChhHHHHHH
Confidence 66667999999999999999988 777777777777889999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++.. ..+.++.++++++++ ..+.+.+.
T Consensus 96 ~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~~~v~~~~---~~~~~~~~ 170 (331)
T 2fv7_A 96 NLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRAKVMVCQL---EITPATSL 170 (331)
T ss_dssp HHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSEEEECS---SSCHHHHH
T ss_pred HHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHH--HHHhhccCCEEEEec---CCCHHHHH
Confidence 9999999999986 46778999998887 58888877777766677666542 234578899999975 34568888
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
.+++.+++.+.++++|+.... ....+.+++++|++++|++|++.+++....+.++++++++.+ .+.+++
T Consensus 171 ~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 239 (331)
T 2fv7_A 171 EALTMARRSGVKTLFNPAPAI-----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVL------LKRGCQ 239 (331)
T ss_dssp HHHHHHHHTTCEEEECCCSCC-----TTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHH------HTTTCS
T ss_pred HHHHHHHHcCCEEEEeCCccc-----ccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCC
Confidence 999999999999999997531 111335778999999999999999875433334567778888 667899
Q ss_pred EEEEeeCCCceEEeeCC--eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC--CCHHHHHHHHhHHHHHHhhhcCc
Q 020650 239 TAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~--~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g--~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
.+++|+|++|+++++++ +.+++++++ ++++||+||||+|.|+|+++|++| +++++|+++|+++|+.++++.|+
T Consensus 240 ~VvvT~G~~G~~~~~~~~~~~~~~~~~~---v~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~~aa~~v~~~G~ 316 (331)
T 2fv7_A 240 VVIITLGAEGCVVLSQTEPEPKHIPTEK---VKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGT 316 (331)
T ss_dssp EEEEECGGGCEEEEESSCCSCEEECCCC---CCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHTSSSG
T ss_pred EEEEEECCCceEEEECCCCceeEecCCC---CccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999998877 677777644 478999999999999999999999 99999999999999999999998
Q ss_pred --cCCCCCCC
Q 020650 315 --TYPEKPEF 322 (323)
Q Consensus 315 --~~p~~~~~ 322 (323)
.+|+.+|+
T Consensus 317 ~~~~p~~~ev 326 (331)
T 2fv7_A 317 QSSYPYKKDL 326 (331)
T ss_dssp GGGCCCGGGS
T ss_pred ccCCCCHHHH
Confidence 56887765
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=333.39 Aligned_cols=294 Identities=18% Similarity=0.255 Sum_probs=233.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++...+ +...+.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~-------g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~G~~i~~ 92 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRP-------GPLEHAEAFHKRTAGAETNVAIGLAR-LG--LKVGWASRLGTDSMGRYLLA 92 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHH
T ss_pred cCCCCCEEEEChhhhhccCCCC-------CccchhhheeecCCCHHHHHHHHHHh-CC--CcEEEEEEeCCCHHHHHHHH
Confidence 5566799999999999997653 35666777889999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceee---cccccccCCcccCCCcchhhhhccccEEEEeccccccCH-
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA---NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP- 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~- 154 (323)
.|++.||+++++. .++.+|+.+++..+ +|+++.+. ..++...++++++.. +.++++++++++|+.+..++
T Consensus 93 ~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~v~~~g~~~~~~~~ 168 (336)
T 4du5_A 93 AMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWLLSARHLHATGVFPAISAT 168 (336)
T ss_dssp HHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHHTTEEEEEEESSGGGSCTT
T ss_pred HHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHhccCCEEEEcCchhhCChH
Confidence 9999999999985 56678999888876 67555432 235666777777753 56789999999997654443
Q ss_pred --HHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhc
Q 020650 155 --DSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 228 (323)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~ 228 (323)
+.+..+++.+++.+.++++|+. +..|. ....+.++++++.+|++++|++|++.+++ .++++++++.+
T Consensus 169 ~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g-----~~~~~~~~~~l-- 241 (336)
T 4du5_A 169 TLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG-----ETTPEGVARFY-- 241 (336)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC-----CCSHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC-----CCCHHHHHHHH--
Confidence 5677889999999999999996 22332 22356678899999999999999999987 35788888888
Q ss_pred CCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCc-ccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHH
Q 020650 229 WPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHV 307 (323)
Q Consensus 229 ~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~-~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~ 307 (323)
.+.+.+.+++|+|++|++++++++.++++++++ + ++||+||||+|.|+|+++|++|+++++|+++|+++|++
T Consensus 242 ----~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~ 314 (336)
T 4du5_A 242 ----RQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPV---AEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGAR 314 (336)
T ss_dssp ----HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC----------CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----HhcCCCEEEEEecCCceEEEECCeEEEeCCccC---CCCCCCccchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 667899999999999999999888888887544 5 89999999999999999999999999999999999999
Q ss_pred HhhhcCcc--CCCCCCC
Q 020650 308 IIQRSGCT--YPEKPEF 322 (323)
Q Consensus 308 ~~~~~G~~--~p~~~~~ 322 (323)
+|++.|+. +|+++|+
T Consensus 315 ~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 315 AVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp HHC------CCCCHHHH
T ss_pred HhccCCCccCCCCHHHH
Confidence 99999984 8877653
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=336.57 Aligned_cols=285 Identities=18% Similarity=0.181 Sum_probs=243.5
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++..+++ +|.++...+.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 29 ~~~i~viG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~i~~~L~ 103 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVAD--MPKGEGKVLPYEVLQIAEGMASSAAYAVHR-MG--GRASLWGAVGDDETGTRILRDLS 103 (343)
T ss_dssp CCEEEEESCCEEEEEEECSS--CCCSSSCCCCSEEEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHH
T ss_pred CCeEEEECcceEEEEeecCC--CCCCCCeEeeeeeEEcCCcHHHHHHHHHHH-cC--CceEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999999999987 666666667777889999999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 161 (323)
++||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++. .+.+.+++++|++++. ++.+..++
T Consensus 104 ~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~----~~~l~~~~~v~~~~~~----~~~~~~~~ 175 (343)
T 2rbc_A 104 ESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT----PEDIALFDAVLVDVRW----PELALDVL 175 (343)
T ss_dssp HTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC----HHHHTTCSEEEECSSS----HHHHHHHH
T ss_pred HcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc----HhhhCCCCEEEEcCCC----HHHHHHHH
Confidence 9999999985 46678999988887 6888887676766566666554 2457899999998753 46788899
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc-cE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK-RT 239 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 239 (323)
+.+++.+.++++|+... .+.+.+ +++++|++++|++|++.+++ .++++++++.+ .+.++ +.
T Consensus 176 ~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~~Ea~~l~g-----~~~~~~~~~~l------~~~g~~~~ 238 (343)
T 2rbc_A 176 TVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSEPAATRLTG-----LETVKDMLPVL------HARYPQTF 238 (343)
T ss_dssp HHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEHHHHHHHHC-----CSSHHHHHHHH------HHHSTTSE
T ss_pred HHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCHHHHHHHcC-----CCCHHHHHHHH------HHhCCCce
Confidence 99999999999999652 234666 89999999999999999987 34788888888 66788 99
Q ss_pred EEEeeCCCceEEeeCC--eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--
Q 020650 240 AVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT-- 315 (323)
Q Consensus 240 vvit~G~~G~~~~~~~--~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~-- 315 (323)
+++|+|++|+++++++ +.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.|+.
T Consensus 239 VvvT~G~~G~~~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~ 315 (343)
T 2rbc_A 239 IAVTAGPAGCWWTEADDPTVHFQTTMQ---VEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIG 315 (343)
T ss_dssp EEEECGGGCEEEECTTCCCEEEECCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSGGGG
T ss_pred EEEEECCcceEEEeCCCceeEEecCCC---CccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCccC
Confidence 9999999999998777 777877654 379999999999999999999999999999999999999999999985
Q ss_pred CCCCCC
Q 020650 316 YPEKPE 321 (323)
Q Consensus 316 ~p~~~~ 321 (323)
+|+++|
T Consensus 316 ~p~~~e 321 (343)
T 2rbc_A 316 APTREE 321 (343)
T ss_dssp CCCHHH
T ss_pred CCCHHH
Confidence 677654
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-47 Score=336.66 Aligned_cols=291 Identities=18% Similarity=0.245 Sum_probs=241.1
Q ss_pred CccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 2 ~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
..+++|+|+|++++|++..+++ .|.++..... .....+||++.|+|.+|++ +| .++.++|.+|+|..|+.+++.
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~--~~~~g~~~~~-~~~~~~GG~~~NvA~~la~-LG--~~v~~i~~vG~D~~g~~i~~~ 77 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKA--SYRPYNSTPG-HVKISFGGVCRNIAENMAR-VG--VNTNFMSILGNDEHGKSIVEH 77 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESS--CCCTTSEEEE-EEEEEEECHHHHHHHHHHH-TT--CCEEEECEECSSHHHHHHHHH
T ss_pred CCCCcEEEECcEEeeeeeccCC--CCCCCCCceE-EEEEccCcHHHHHHHHHHH-cC--CCcEEEEEecCcHHHHHHHHH
Confidence 3467999999999999999988 6666665555 6788999999999999998 56 999999999999999999999
Q ss_pred HHHcCceeEEee-cCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 82 SKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 82 l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
|++.||+++++. .++.+|+.++++++ +|+|.+. ...+....++++.+.. ..+.+..++++++++.. + +.+.
T Consensus 78 L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~-~~~~ 151 (328)
T 3kzh_A 78 SKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDS--KREIFENAEYTVLDSDN---P-EIME 151 (328)
T ss_dssp HHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHH--THHHHHTCSEEEEESSC---H-HHHH
T ss_pred HHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHH--HHHhhccCCEEEEeCCc---H-HHHH
Confidence 999999999874 56778999998887 6888763 3344444555554432 34568899999998742 2 6777
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
.+++ +++.+.++++|+.+.. ..+.++.+++.+|++++|++|++.+++....+.++++++++.+ .+.+++
T Consensus 152 ~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 220 (328)
T 3kzh_A 152 YLLK-NFKDKTNFILDPVSAE----KASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYF------LGLGIK 220 (328)
T ss_dssp HHHH-HHTTTSEEEEECCSHH----HHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHH------HHHTCC
T ss_pred HHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHH------HHhCCC
Confidence 7777 8888999999997644 2344667889999999999999999985544345677788888 667899
Q ss_pred EEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCC
Q 020650 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~ 318 (323)
.+++|+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|+..|.
T Consensus 221 ~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~ 297 (328)
T 3kzh_A 221 KVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISHEETIHPD 297 (328)
T ss_dssp EEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCTT
T ss_pred EEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 999999999999998888888886544 79999999999999999999999999999999999999999999996543
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=339.55 Aligned_cols=295 Identities=24% Similarity=0.260 Sum_probs=230.1
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++...++ .|.. .......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~--~~~~-----~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~g~~l~~ 70 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLV--KKGM-----PRAFLQCAGGAPANVAVAVAR-LG--GAVQFVGMLGSDMFGDFLFD 70 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCS--STTS-----CCCEEEEEECHHHHHHHHHHH-HT--CCEEEESEEESSHHHHHHHH
T ss_pred CCCCCCEEEEChhhhheeccCCC--Cccc-----hhceeecCCChHHHHHHHHHh-CC--CCEEEEeeccCCHHHHHHHH
Confidence 89999999999999999998877 4432 567888999999999999998 66 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccc--cCH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSP 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~ 154 (323)
.|+++||+++++. .++.+|+.+++.++ +|+|++..+. +++..++++++.. +.+++++++|++++.+. .+.
T Consensus 71 ~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~ 146 (338)
T 3ljs_A 71 SFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD----ASFSDALIFHACSNSMTDADIA 146 (338)
T ss_dssp HHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH----HHHHTEEEEEEEGGGGSSHHHH
T ss_pred HHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH----hHhcCCCEEEECChHhcCchHH
Confidence 9999999999985 47778999998886 6888765543 5556677777763 46789999999987532 234
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.+..+++.+++.+.++++|+.. ..|. ....+.++.+++.+|++++|++|++.+++.... +.+++++.+
T Consensus 147 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~---~~~~~~~~l---- 219 (338)
T 3ljs_A 147 EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAA---DANAVIQQL---- 219 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTS---CHHHHHHHH----
T ss_pred HHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCCh---hHHHHHHHH----
Confidence 77889999999999999999842 2221 113556788899999999999999999885422 223477888
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC--------------CCHHH
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--------------KPIEE 296 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g--------------~~~~~ 296 (323)
.+.+++.++||+|++|++++++++.++++++++ +++|||||||+|.|||+++|++| +++++
T Consensus 220 --~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~l~~ 294 (338)
T 3ljs_A 220 --WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVS 294 (338)
T ss_dssp --TTTTCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHHHHH
T ss_pred --HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHHHHH
Confidence 667899999999999999999888888887554 79999999999999999999999 89999
Q ss_pred HHHHHhHHHHHHhhhcCcc--CCCCCC
Q 020650 297 CVRAGCYTSHVIIQRSGCT--YPEKPE 321 (323)
Q Consensus 297 a~~~A~~~Aa~~~~~~G~~--~p~~~~ 321 (323)
|+++|+++|+++|++.|+. +|+++|
T Consensus 295 al~~A~~~aa~~v~~~Ga~~~~p~~~e 321 (338)
T 3ljs_A 295 TLRFAAAVGALAVTRQGAFTAMPMLSE 321 (338)
T ss_dssp HHHHHHHHHGGGC----CCCCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 9999999999999999984 576554
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-47 Score=333.17 Aligned_cols=276 Identities=19% Similarity=0.231 Sum_probs=237.8
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+|+++|+|+|++++|++..+++ +|.+++..........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~ 90 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVDA--LPRPGETVLAASLTRTPGGKGANQAVAAAR-AG--AQVQFSGAFGDDPAAAQLRA 90 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECSS--CCCTTCCCCCSEEEEEEECHHHHHHHHHHH-TT--CEEEEECEECSSHHHHHHHH
T ss_pred ccccCCEEEECCceEEEEEecCC--CCCCCCeEEecceeecCCCHHHHHHHHHHH-CC--CCeEEEEEECCCHHHHHHHH
Confidence 45677999999999999999988 777788888888899999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHH
Q 020650 81 NSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 159 (323)
Q Consensus 81 ~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 159 (323)
.|+++||+++++...+.+|+.+++.++ +|+|+++.+.++...++ ++ .+.+++++++++++ ..+.+.+..
T Consensus 91 ~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-----~~~l~~~~~v~~~~---~~~~~~~~~ 160 (310)
T 3go6_A 91 HLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-----PSAVANCDVLLTQL---EIPVATALA 160 (310)
T ss_dssp HHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-----TTTTTTCSEEEECS---SSCHHHHHH
T ss_pred HHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-----HHHhhcCCEEEECC---CCCHHHHHH
Confidence 999999999998766678999999887 68998888777766665 22 35578999999986 356788999
Q ss_pred HHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 160 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+++.+++.+.++++|+.+..+ ..+.++.+++.+|++++|++|++.+++. .+.
T Consensus 161 ~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~~Ea~~l~g~-------------------------~~~ 212 (310)
T 3go6_A 161 AARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANEHEANDWPSP-------------------------PTH 212 (310)
T ss_dssp HHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEHHHHHHSSSC-------------------------CSE
T ss_pred HHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCHHHHHHHhCC-------------------------CCE
Confidence 999999999999999986542 3455778899999999999999887541 467
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhc----CCCHHHHHHHHhHHHHHHhhhcCc-
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ----EKPIEECVRAGCYTSHVIIQRSGC- 314 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~----g~~~~~a~~~A~~~Aa~~~~~~G~- 314 (323)
+++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++ |+++++|+++|+++|+++|++.|+
T Consensus 213 vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~~~G~~ 289 (310)
T 3go6_A 213 FVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVG 289 (310)
T ss_dssp EEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTTSSCST
T ss_pred EEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999888888887544 7899999999999999999999 999999999999999999999999
Q ss_pred -cCCCCCCC
Q 020650 315 -TYPEKPEF 322 (323)
Q Consensus 315 -~~p~~~~~ 322 (323)
.+|+++|+
T Consensus 290 ~~~p~~~ev 298 (310)
T 3go6_A 290 DCAPAAAAI 298 (310)
T ss_dssp TCCCCHHHH
T ss_pred CCCCCHHHH
Confidence 56776653
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=324.66 Aligned_cols=289 Identities=18% Similarity=0.248 Sum_probs=236.2
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
++++|+|+|++++|++..... ......+||++.|+|.+|++ +|.|.++.++|.+|+|.+|+.+++.|
T Consensus 22 ~m~~i~viG~~~iD~~~~~~~------------~~~~~~~GG~~~NvA~~la~-Lg~G~~~~~ig~vG~D~~G~~l~~~L 88 (328)
T 4e69_A 22 SMMHILSIGECMAELAPADLP------------GTYRLGFAGDTFNTAWYLAR-LRPESRISYFSAIGDDALSQQMRAAM 88 (328)
T ss_dssp SSCEEEEESCCEEEEEECSST------------TEEEEEEECHHHHHHHHHHH-HCTTSEEEEECEECSSHHHHHHHHHH
T ss_pred cCCcEEEecCcEEEEecCCCC------------CceEEecCCHHHHHHHHHHh-cCCCCcEEEEEeeCCCHHHHHHHHHH
Confidence 456999999999999986211 34678999999999999998 52249999999999999999999999
Q ss_pred HHcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcc-hhhhhccccEEEEecccccc----CHHH
Q 020650 83 KLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPE-NWALVEKAKYFYIAGFFLTV----SPDS 156 (323)
Q Consensus 83 ~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~i~~~~~~~----~~~~ 156 (323)
++.||+++++. .++.+|+.+++.+++|+|+++.+.+..... ..+...+ ..+.++++|+++++++.+.. +.+.
T Consensus 89 ~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 166 (328)
T 4e69_A 89 SAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAAR--ELAGDADALAAAMARADVVYFSGITLAILDQCGRAT 166 (328)
T ss_dssp HHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGG--GTTSCHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHH
T ss_pred HHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHH--hhcCccccchHHhcCCCEEEECCchhhccCchHHHH
Confidence 99999999985 466789999888888888887665542210 1111111 12568899999999976432 3467
Q ss_pred HHHHHHHHHhCCCeEEEeCC--chhH--HHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 157 IQLVAEHAAANNKVFMMNLS--APFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~--~~~~--~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
+.++++.+++.+.++++|+. +..| .....+.++++++.+|++++|++|++.+++ .++++++++.+
T Consensus 167 ~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------ 235 (328)
T 4e69_A 167 LLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG-----DAGPDATADRY------ 235 (328)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT-----CSSHHHHHHHH------
T ss_pred HHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC-----CCCHHHHHHHH------
Confidence 78899999999999999994 4344 133456678899999999999999999987 35788899998
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
.+.+.+.++||+|++|++++++++.+++++++ ..+++||+||||+|.|+|+++|++|+++++|+++|+++|+++|++.
T Consensus 236 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~ 313 (328)
T 4e69_A 236 ARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPP--VAQVVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGK 313 (328)
T ss_dssp HTTTCSEEEEBCTTSCEEEEETTEEEEECCCC--CCSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSS
T ss_pred HhcCCCEEEEEeCCCCeEEEeCCceEEecCCC--CCCccCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHccC
Confidence 66789999999999999999988888888643 2479999999999999999999999999999999999999999999
Q ss_pred CccCCCC
Q 020650 313 GCTYPEK 319 (323)
Q Consensus 313 G~~~p~~ 319 (323)
|+.+|..
T Consensus 314 Ga~~p~~ 320 (328)
T 4e69_A 314 GALVEVP 320 (328)
T ss_dssp SSSCCC-
T ss_pred CCcCChh
Confidence 9987754
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=325.41 Aligned_cols=294 Identities=19% Similarity=0.238 Sum_probs=238.8
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++...+. .|. .+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~--~p~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~ 75 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSG--VGL----ADVQSFGKYLGGSAANVSVAAAR-HG--HNSALLSRVGNDPFGEYLLA 75 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSS--CCG----GGCCCBCCEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHH
T ss_pred cccCCCEEEEChhheeeecccCC--CCc----cccceeeecCCCcHHHHHHHHHH-CC--CceEEEEEeCCCHHHHHHHH
Confidence 66677999999999999987765 332 24567788999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeeccc--c-cccCCcccCCCcchhhhhccccEEEEeccccccC--
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLS--A-ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVS-- 153 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~-- 153 (323)
.|+++||+++++. .++.+|+.+++.++ +++++++.+.. + ...++++++. .+.+++++++|++++.+...
T Consensus 76 ~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 151 (319)
T 3pl2_A 76 ELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVS----LDDVREADILWFTLTGFSEEPS 151 (319)
T ss_dssp HHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSC----HHHHHHCSEEEEEGGGGSSTTH
T ss_pred HHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCC----HHHhccCCEEEEecccccCchh
Confidence 9999999999985 57778999988776 67777665532 3 4466666665 35688999999999865332
Q ss_pred HHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcC
Q 020650 154 PDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~ 229 (323)
.+.+..+++.+++ +.++++|+. +..|. ....+.++.+++++|++++|++|++.+++ .++++++++.+
T Consensus 152 ~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l--- 222 (319)
T 3pl2_A 152 RGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVG-----ETEPERAGRAL--- 222 (319)
T ss_dssp HHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHS-----CCSHHHHHHHH---
T ss_pred HHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcC-----CCCHHHHHHHH---
Confidence 2456667776665 455677774 33332 23456678899999999999999999987 35788888888
Q ss_pred CccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 230 ~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
.+.+.+.+++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+++|+++|++++
T Consensus 223 ---~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 296 (319)
T 3pl2_A 223 ---LERGVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVA 296 (319)
T ss_dssp ---HHTTCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ---HhcCCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 667899999999999999998888888887544 79999999999999999999999999999999999999999
Q ss_pred hhcCc--cCCCCCCC
Q 020650 310 QRSGC--TYPEKPEF 322 (323)
Q Consensus 310 ~~~G~--~~p~~~~~ 322 (323)
++.|+ .+|+++|+
T Consensus 297 ~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 297 SRLECSTAMPTTDEV 311 (319)
T ss_dssp TSSCSGGGCCCHHHH
T ss_pred hccCCcCCCCCHHHH
Confidence 99997 57877653
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=333.97 Aligned_cols=295 Identities=17% Similarity=0.198 Sum_probs=240.1
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++.. .++...+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 3 ~~v~viG~~~~D~~~~-------~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~~l~~ 72 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPP-------EYLMLEQTEQLRMNFVGTGVNLLANLAH-FQ--LETALITKLPANRLGEAGKAALRK 72 (346)
T ss_dssp CEEEEECCCEEEEECS-------TTCCTTTCSCCEEEEECHHHHHHHHHHH-TT--CEEEEEEEECSSHHHHHHHHHHHH
T ss_pred CcEEEeChhhhhhcCC-------CCCcccccceeEEeccCHHHHHHHHHHH-cC--CCeEEEEecCCCHHHHHHHHHHHH
Confidence 5899999999998852 2345566778889999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCC-ccceeec----ccccccCCcccCCCcchhhhhccccEEEEeccccccCH---HH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGG-ERSLVAN----LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP---DS 156 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~---~~ 156 (323)
.||+++++...+.+|+.+++..+++ +++++.+ .++...+++++++ ..+.+++++++|++|+.+..++ +.
T Consensus 73 ~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~~v~~~g~~~~~~~~~~~~ 149 (346)
T 3ktn_A 73 LGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAEVDMVHICGISLSLTEKTRDA 149 (346)
T ss_dssp TTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTTCSEEEECTHHHHHCHHHHHH
T ss_pred cCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC---hHHHhCCCCEEEEeCccccCCHHHHHH
Confidence 9999999876667899988877644 4466555 2344556666664 2356889999999998754444 67
Q ss_pred HHHHHHHHHhCCCeEEEeCC--chhHH----HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhc-CC---CCCCHHHHHHHH
Q 020650 157 IQLVAEHAAANNKVFMMNLS--APFIC----EFFKDALEKVLPYMDYIFGNETEARTFSKVQ-GW---ETDDVEEIALKL 226 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~--~~~~~----~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~-~~---~~~~~~~~~~~l 226 (323)
+.++++.+++.+.++++|+. +..|. ....+.++.+++++|++++|++|++.+++.. .. +.++++++++.|
T Consensus 150 ~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l 229 (346)
T 3ktn_A 150 ALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRF 229 (346)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHH
Confidence 88999999999999999984 34443 3345678889999999999999999998743 11 112467777777
Q ss_pred hcCCcccc-CCccEEEEeeCCCc-------eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHH
Q 020650 227 SQWPKASE-IRKRTAVITQGADP-------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 298 (323)
Q Consensus 227 ~~~~~~~~-~~~~~vvit~G~~G-------~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~ 298 (323)
.. .|++.+++|+|++| ++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+
T Consensus 230 ------~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~l~~a~ 300 (346)
T 3ktn_A 230 ------MSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDAYAAGILYGYSQNWSLEKAV 300 (346)
T ss_dssp ------HHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ------HHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhHHHHHHHHHHHHcCCCHHHHH
Confidence 44 38999999999998 88888888888887665 789999999999999999999999999999
Q ss_pred HHHhHHHHHHhhhcCcc-CCCCCC
Q 020650 299 RAGCYTSHVIIQRSGCT-YPEKPE 321 (323)
Q Consensus 299 ~~A~~~Aa~~~~~~G~~-~p~~~~ 321 (323)
++|+++|++++++.|+. .|+.+|
T Consensus 301 ~~A~a~aa~~v~~~G~~~~p~~~e 324 (346)
T 3ktn_A 301 TFATVNGVLAHTIQGDIPLTTVKQ 324 (346)
T ss_dssp HHHHHHHHHHTTSSSSCCCCCHHH
T ss_pred HHHHHHHHHHhccCCCCCCCCHHH
Confidence 99999999999999985 566544
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=332.73 Aligned_cols=276 Identities=20% Similarity=0.243 Sum_probs=239.8
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+ |+|+|+|++++|++..+++ +|.++...........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 M~--~~i~viG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-lG--~~~~~i~~vG~D~~g~~i~~ 73 (299)
T 3ikh_A 1 MS--LRVYVTGNITVDETWSIPD--IPKKGASIHGVKVSQDIGGKGANQAIILSR-CG--IETRLIAATGNDSNGAWIRQ 73 (299)
T ss_dssp -C--CCEEEECCCEEEEEEECSS--CCCTTCEEECEEEEEEEECHHHHHHHHHHH-TT--CCEEEECCCCSSHHHHHHHH
T ss_pred CC--ceEEEECceEEEEEEecCC--CCCCCCeEEeeeeeeccCCHHHHHHHHHHH-CC--CCeEEEEEECCCHHHHHHHH
Confidence 55 4899999999999999998 778888888888889999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHH
Q 020650 81 NSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 159 (323)
Q Consensus 81 ~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 159 (323)
.|+++||+++++..++.+|+.++++++ +|+|+++.+.+++..++++++.. ..+.++.++++++++. .+.+.+..
T Consensus 74 ~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~v~~~g~---~~~~~~~~ 148 (299)
T 3ikh_A 74 QIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIP--HMADAVAGDILLQQGN---FSLDKTRA 148 (299)
T ss_dssp HGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTCEEEECSC---SCHHHHHH
T ss_pred HHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHH--HHhhhccCCEEEECCC---CCHHHHHH
Confidence 999999999998767778999998886 78998887777777788776643 3355789999999863 46788999
Q ss_pred HHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 160 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+++.+++.+.++++|+.... +.+..+++.+|++++|++|++.+++ .+.+.
T Consensus 149 ~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g------------------------~g~~~ 198 (299)
T 3ikh_A 149 LFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNESEAELLQP------------------------YGVKT 198 (299)
T ss_dssp HHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEHHHHHHHCC------------------------CSCSE
T ss_pred HHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecHHHHHHHhc------------------------CCCCE
Confidence 99999999999999997642 2356789999999999999988753 25789
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHH-HHHHHhhcCCCHHH-HHHHHhHHHHHHhhhcCcc--
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG-GFLSQLVQEKPIEE-CVRAGCYTSHVIIQRSGCT-- 315 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~a-g~~~~l~~g~~~~~-a~~~A~~~Aa~~~~~~G~~-- 315 (323)
+++|+|++|++++++++.+++|++++ +++||+||||+|.| +|+++|++|+++++ |+++|+++|+++|++.|+.
T Consensus 199 vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~~G~~~~ 275 (299)
T 3ikh_A 199 LVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSRRGTLSA 275 (299)
T ss_dssp EEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHSSSSTTT
T ss_pred EEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCccccc
Confidence 99999999999998888888887544 78999999999999 99999999999999 9999999999999999984
Q ss_pred CCCCCC
Q 020650 316 YPEKPE 321 (323)
Q Consensus 316 ~p~~~~ 321 (323)
+|+++|
T Consensus 276 ~p~~~e 281 (299)
T 3ikh_A 276 FPGSRE 281 (299)
T ss_dssp SCCHHH
T ss_pred CCCHHH
Confidence 577654
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=332.16 Aligned_cols=294 Identities=18% Similarity=0.198 Sum_probs=234.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+| ++|+|+|++++|++...+. .+...........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 m~m-~~i~viG~~~~D~~~~~~~-----~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~ 71 (330)
T 3iq0_A 1 MSL-SKVFTIGEILVEIMASKIG-----QPFDQPGIWNGPYPSGAPAIFIDQVTR-LG--VPCGIISCVGNDGFGDINIH 71 (330)
T ss_dssp ----CEEEEESCCEEEEEEEEET-----CCSSSCEEEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHH
T ss_pred CCC-CCEEEEcceeEEEeccCCC-----CCccccccccCcCCCCHHHHHHHHHHH-CC--CcEEEEEEeCCChHHHHHHH
Confidence 654 5999999999999976322 111111112356889999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceee-cc-cccccCCcccCCCcchhhhhccccEEEEecccc--ccCH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA-NL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFL--TVSP 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~--~~~~ 154 (323)
.|++.||+++++. .++.+|+.+++.++ +|+|++.. .. ++...++++++.. ..+++++++|++|+.+ ....
T Consensus 72 ~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~sg~~~~~~~~~ 147 (330)
T 3iq0_A 72 RLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE----NILKDCTHFHIMGSSLFSFHMV 147 (330)
T ss_dssp HHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG----GGGTTEEEEEEEGGGCSSHHHH
T ss_pred HHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH----hHhccCCEEEEechhhcCcchH
Confidence 9999999999985 56778999988876 67874332 22 3555677777653 4688999999999875 1223
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCch--hHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCc
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSAP--FIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~ 231 (323)
+.+.++++.+++.+.++++|+... .|. ....+.++.+++.+|++++|++|++.+++ .++++++++.+
T Consensus 148 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l----- 217 (330)
T 3iq0_A 148 DAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSP-----HSTPERAIAGF----- 217 (330)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCS-----CSSHHHHHHHH-----
T ss_pred HHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHH-----
Confidence 568889999999999999999643 232 23456678889999999999999998876 35788888888
Q ss_pred cccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 232 ~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
.+.+++.+++|+|++|++++++++.+++|++++ +++|||||||+|.|+|+++|++|+++++|+++|+++|+++|++
T Consensus 218 -~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 293 (330)
T 3iq0_A 218 -LEEGVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTR 293 (330)
T ss_dssp -HHHTCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTS
T ss_pred -HHcCCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 667899999999999999998888888887544 7999999999999999999999999999999999999999999
Q ss_pred cCc--cCCCCCC
Q 020650 312 SGC--TYPEKPE 321 (323)
Q Consensus 312 ~G~--~~p~~~~ 321 (323)
.|+ ..|+++|
T Consensus 294 ~G~~~~~p~~~e 305 (330)
T 3iq0_A 294 RGPMEGTSRLME 305 (330)
T ss_dssp CSSSTTCCCHHH
T ss_pred cCCCCCCCCHHH
Confidence 999 4676654
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=324.10 Aligned_cols=298 Identities=22% Similarity=0.306 Sum_probs=235.7
Q ss_pred CCc-cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 1 MAQ-EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~-~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
|+| +++|+|+|++++|++...... .+.........+....+||++.|+|.+|++ +| .++.++|.+|+|.+|++++
T Consensus 1 m~m~~~~v~~iG~~~~D~~~~~~~~-~~~~~~~~p~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~G~~i~ 76 (325)
T 3h49_A 1 MSLDNLDVICIGAAIVDIPLQPVSK-NIFDVDSYPLERIAMTTGGDAINEATIISR-LG--HRTALMSRIGKDAAGQFIL 76 (325)
T ss_dssp ----CEEEEEESCCEEEEEECSCCG-GGGGSSCCCCSCCCCEEESHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHH
T ss_pred CCCCCCeEEEEChhhheeeccCCCC-ccccccccchheeEEccCcHHHHHHHHHHH-CC--CCeEEEEEECCChHHHHHH
Confidence 676 459999999999997654321 111111112245678999999999999998 56 9999999999999999999
Q ss_pred HHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeeccc-ccccCCcccCCCcchhhhhccccEEEEeccccc--cCH
Q 020650 80 KNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSP 154 (323)
Q Consensus 80 ~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~ 154 (323)
+.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+ +...++++++.. +.+.++++++++++... .+.
T Consensus 77 ~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~ 152 (325)
T 3h49_A 77 DHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF----ARFSQAKLLSLASIFNSPLLDG 152 (325)
T ss_dssp HHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG----GGGGGCSEEEEEEETTSTTSCH
T ss_pred HHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh----hhhccCCEEEEecccCCcccCH
Confidence 99999999999985 46778999988886 78888876654 334566666653 45789999999986532 345
Q ss_pred HHHHHHHHHHHhCCCeEEE-eCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccc
Q 020650 155 DSIQLVAEHAAANNKVFMM-NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (323)
+.+.++++.+++++..+.. ++++..|. ..+.+.++++++|++++|++|++.+++ .++++++++.+ .
T Consensus 153 ~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~ 219 (325)
T 3h49_A 153 KALTEIFTQAKARQMIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTG-----KETLDEIADCF------L 219 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHT-----CSSHHHHHHHH------H
T ss_pred HHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHH------H
Confidence 7889999999998854332 34544331 234467889999999999999999987 35788888888 6
Q ss_pred cCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 234 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 234 ~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
..+++.+++|+|++|++++++++.+++|+++. .+++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|
T Consensus 220 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G 297 (325)
T 3h49_A 220 ACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVG 297 (325)
T ss_dssp TTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS
T ss_pred HcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccC
Confidence 67899999999999999999888888876532 3789999999999999999999999999999999999999999999
Q ss_pred cc--CCCCCC
Q 020650 314 CT--YPEKPE 321 (323)
Q Consensus 314 ~~--~p~~~~ 321 (323)
+. +|+++|
T Consensus 298 ~~~~~p~~~e 307 (325)
T 3h49_A 298 ATTGVKNRKL 307 (325)
T ss_dssp SSSSCSSSHH
T ss_pred CCCCCCCHHH
Confidence 74 677655
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=332.82 Aligned_cols=292 Identities=18% Similarity=0.270 Sum_probs=226.2
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++...++ .|. .+.......+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 21 ~~~v~viG~~~~D~~~~~~~--~p~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~g~~i~~~l~ 91 (327)
T 3hj6_A 21 DLDVVSLGEILVDMISTEEV--NSL----SQSREYTRHFGGSPANIAVNLSR-LG--KKVALISRLGADAFGNYLLDVLK 91 (327)
T ss_dssp -CCEEEESCCEEEEECCCCC--SSG----GGCCEEEEEEECHHHHHHHHHHH-TT--CCEEEECEEESSHHHHHHHHHHH
T ss_pred CCCEEEEccceEEEeccCCC--CCc----cccceeeeecCcHHHHHHHHHHH-cC--CcEEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999999988876 333 25667888999999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLV 160 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~~~ 160 (323)
++||+++++. .++.+|+.+++..++|+|+++.+.+++..++++++. .+.++++|++|++++.+. .+.+.+.++
T Consensus 92 ~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~v~~~g~~l~~~~~~~~~~~~ 167 (327)
T 3hj6_A 92 GEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII----FELIKRSKVFHLSTFILSRKPARDTAIKA 167 (327)
T ss_dssp HTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH----HHHHC--CEEEEESHHHHSHHHHHHHHHH
T ss_pred HcCCCcccEEEcCCCCceEEEEEecCCCccEEEecChhhhCChhhcC----HhHhccCCEEEECchHhcCchhHHHHHHH
Confidence 9999999985 567788888776667888887777776666665543 356789999999987542 345788899
Q ss_pred HHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC
Q 020650 161 AEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (323)
++.+++++.++++|+... .|. ....+.++.+++++|++++|++|++.+++. ++.+++++.+ .+.+
T Consensus 168 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g 236 (327)
T 3hj6_A 168 FNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----DSPENYVKRY------LELG 236 (327)
T ss_dssp HHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----SCSSGGGGGG------TTTT
T ss_pred HHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhCC
Confidence 999999999999999642 221 112455778999999999999999999874 3455666677 6678
Q ss_pred ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc--
Q 020650 237 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC-- 314 (323)
Q Consensus 237 ~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~-- 314 (323)
.+.+++|+|++|++++++++.+++++++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.|+
T Consensus 237 ~~~vvvt~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~ 313 (327)
T 3hj6_A 237 VKAVILTLGEEGVIASDGEEIIRIPAFS---EDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALS 313 (327)
T ss_dssp CSEEEEECSTTCEEEECSSCEEESCSST---TC-----CCHHHHHHHHHHTTSSCSTTHHHHHHHHCCCSSCC-------
T ss_pred CCEEEEEECCCceEEEeCCeeEEcCCcc---cccCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999888888877654 47999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCC
Q 020650 315 TYPEKPEF 322 (323)
Q Consensus 315 ~~p~~~~~ 322 (323)
.+|+++|+
T Consensus 314 ~~p~~~ev 321 (327)
T 3hj6_A 314 PVPSKEDI 321 (327)
T ss_dssp --------
T ss_pred CCCCHHHH
Confidence 57888875
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-46 Score=325.35 Aligned_cols=286 Identities=20% Similarity=0.281 Sum_probs=236.7
Q ss_pred CCccc-eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 1 MAQEG-ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~~~-~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
|.++| +|+++|++++|++..+++ +|.++...........+||++.|+|.++++ +| .++.++|.+|+|.+|+.++
T Consensus 1 ~~~~m~~i~viG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~i~~vG~D~~g~~i~ 75 (302)
T 2c4e_A 1 MGGKMEKITCVGHTALDYIFNVEK--FPEPNTSIQIPSARKYYGGAAANTAVGIKK-LG--VNSELLSCVGYDFKNSGYE 75 (302)
T ss_dssp -CCCEEEEEEESCCEEEEEEECSS--CCCTTCCCCCSCEEEEEECHHHHHHHHHHH-TT--CEEEEECEECTTTTTSHHH
T ss_pred CCCCcCcEEEECceeEEEEecccc--cCCCCceeeecceeecCCCHHHHHHHHHHH-CC--CceEEEEEEeCCCchHHHH
Confidence 55443 899999999999999988 677777777777889999999999999998 56 9999999999999999999
Q ss_pred HHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHH
Q 020650 80 KNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157 (323)
Q Consensus 80 ~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 157 (323)
+.|++.||+++++. .++.+|+.++++++ +|+|+++.+.++...++++++.. .+++++|+++. .++.+
T Consensus 76 ~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~----~~~~~ 144 (302)
T 2c4e_A 76 RYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FNTEIVHIATG----DPEFN 144 (302)
T ss_dssp HHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-------CCEEEEEECSS----CHHHH
T ss_pred HHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-------ccCCEEEEeCC----CcHHH
Confidence 99999999999875 56678999998886 68888877777766677666642 68999999863 34788
Q ss_pred HHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc
Q 020650 158 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
..+++.+++.+ ++++|+....+. ...+.++++++++|++++|++|++.+++.... +.. .+ .+. .
T Consensus 145 ~~~~~~a~~~g-~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~~----~l------~~~-~ 208 (302)
T 2c4e_A 145 LKCAKKAYGNN-LVSFDPGQDLPQ-YSKEMLLEIIEHTNFLFMNKHEFERASNLLNF---EID----DY------LER-V 208 (302)
T ss_dssp HHHHHHHBTTB-EEEECCGGGGGG-CCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTC---CHH----HH------HTT-C
T ss_pred HHHHHHHHhcC-CEEEeCchhhhh-hhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCc---cHH----HH------Hhc-C
Confidence 89999999999 999999743211 01345678899999999999999999875432 221 45 445 7
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCc-ccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc-
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT- 315 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~-~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~- 315 (323)
+.+++|+|++|++++++++.+++|++++ + ++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|+.
T Consensus 209 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~ 285 (302)
T 2c4e_A 209 DALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQT 285 (302)
T ss_dssp SEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSST
T ss_pred CEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccccccc
Confidence 8999999999999988777778876543 6 8999999999999999999999999999999999999999999984
Q ss_pred -CCCCCC
Q 020650 316 -YPEKPE 321 (323)
Q Consensus 316 -~p~~~~ 321 (323)
+|+++|
T Consensus 286 ~~p~~~e 292 (302)
T 2c4e_A 286 NLPTWDK 292 (302)
T ss_dssp TCCCHHH
T ss_pred cCCCHHH
Confidence 566544
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-45 Score=321.71 Aligned_cols=291 Identities=21% Similarity=0.247 Sum_probs=234.5
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++..+++ .|.++...... ....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 4 ~~i~viG~~~~D~~~~~~~--~~~~~~~~~~~-~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~l~~~L~~ 77 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIET--ETAPGASNPGS-WMEEAGGGGFNAARNLSR-LG--FEVRIIAPRGGDVTGEVVAEAARQ 77 (317)
T ss_dssp CEEEEESCCEEEEEEEESS--SCCTTSCCCEE-EEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHHH
T ss_pred CeEEEECchheEEeeccCC--CCCCCCCceEe-EEEeCCcHHHHHHHHHHh-cC--CCcEEEEeecCCchHHHHHHHHHH
Confidence 4899999999999998886 45555544444 678999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEe-CCccceeecc-cccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVV-GGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+||+++++..++.+|+.++++++ +|++++..+. +....++++++......+.+..++++++++ ..+.+.+..+++
T Consensus 78 ~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~ 154 (317)
T 2nwh_A 78 AGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLLCDA---NLPEDTLTALGL 154 (317)
T ss_dssp TTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEEEET---TSCHHHHHHHHH
T ss_pred cCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEEEeC---CCCHHHHHHHHH
Confidence 99999996567778999998886 6888765443 334456666554311115678899999975 346788999999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.+++.+.++++|+.... ..+.++++++++|++++|++|++.+++. +.++++++++.+ .+.|++.+++
T Consensus 155 ~a~~~g~~v~~Dp~~~~----~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~~l------~~~g~~~vvv 221 (317)
T 2nwh_A 155 IARACEKPLAAIAISPA----KAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPNIL------RKAGLSGGVV 221 (317)
T ss_dssp HHHHTTCCEEEECCSHH----HHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHHHH------HHTTCCCEEE
T ss_pred HHHhcCCeEEEeCCCHH----HHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHHHH------HHcCCCEEEE
Confidence 99999999999997533 2234567889999999999999999874 224556677777 5668899999
Q ss_pred eeCCCceEEeeCC-eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC--CCC
Q 020650 243 TQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY--PEK 319 (323)
Q Consensus 243 t~G~~G~~~~~~~-~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~--p~~ 319 (323)
|+|++|+++++++ ..+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+.. |++
T Consensus 222 t~G~~G~~~~~~~~~~~~~~~~~---v~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~ 298 (317)
T 2nwh_A 222 TRGASEVVAFNGTEKAILHPPLI---REVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAAAITVQSSFATSQDLSK 298 (317)
T ss_dssp EETTTEEEEECSSCEEEECCCCS---SSCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSTTCCGGGCCH
T ss_pred EECCCcEEEEcCCCceEEeCCCC---ccccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999998765 456776543 4799999999999999999999999999999999999999999999953 554
Q ss_pred C
Q 020650 320 P 320 (323)
Q Consensus 320 ~ 320 (323)
+
T Consensus 299 ~ 299 (317)
T 2nwh_A 299 D 299 (317)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=320.99 Aligned_cols=293 Identities=19% Similarity=0.190 Sum_probs=240.6
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
|+|-++|.+++++|++..+++ + .+++.++..+....+||++.|+|.++++ +| .++.++|.+|+| .|+.+++.|
T Consensus 1 m~~i~~v~~n~~~D~~~~v~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~d-~g~~i~~~l 73 (309)
T 3umo_A 1 MVRIYTLTLAPSLDSATITPQ--I-YPEGKLRCTAPVFEPGGGGINVARAIAH-LG--GSATAIFPAGGA-TGEHLVSLL 73 (309)
T ss_dssp CCCEEEECSSCEEEEEEEESC--C-CSSSEEECCCCEEEEESHHHHHHHHHHH-TT--CCEEEEEEECHH-HHHHHHHHH
T ss_pred CCcEEEEecchhheEEEEcCc--c-cCCCeEEeceeeecCCchHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHHHHH
Confidence 344566668999999999998 5 5789999999999999999999999998 56 999999999999 999999999
Q ss_pred HHcCceeEEeecCCCCceeEEEEEe--CCccceeecccccccCCcccCCC-cchhhhhccccEEEEecccc-ccCHHHHH
Q 020650 83 KLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKK-PENWALVEKAKYFYIAGFFL-TVSPDSIQ 158 (323)
Q Consensus 83 ~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~i~~~~~-~~~~~~~~ 158 (323)
+++||+++++...+ +|+.++.+++ +|+++++...++ .+++++++. .+..+.+...++++++++.+ ..+.+.+.
T Consensus 74 ~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (309)
T 3umo_A 74 ADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLT 150 (309)
T ss_dssp HHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHHH
T ss_pred HHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHHH
Confidence 99999999987543 4666555454 577777666554 355554422 01112235788999998653 45678899
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCC--CcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY--MDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~--~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (323)
.+++.+++++.++++|+.... +.++++. +|++++|++|++.+++....+.++++++++.+ .+.+
T Consensus 151 ~~~~~a~~~~~~v~~D~~~~~--------l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g 216 (309)
T 3umo_A 151 QLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEI------VNSG 216 (309)
T ss_dssp HHHHHHHHTTCEEEEECCHHH--------HHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHH------HHTT
T ss_pred HHHHHHHhcCCEEEEECCcHH--------HHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcC
Confidence 999999999999999996432 5677777 59999999999999986554556788888888 5666
Q ss_pred c-cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc
Q 020650 237 K-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315 (323)
Q Consensus 237 ~-~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~ 315 (323)
. +.+++|+|++|++++++++.++++++++ +++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.|+.
T Consensus 217 ~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~ 293 (309)
T 3umo_A 217 KAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTR 293 (309)
T ss_dssp SBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSTTC
T ss_pred CCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCC
Confidence 5 7999999999999998888888886543 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 020650 316 YPEKPEF 322 (323)
Q Consensus 316 ~p~~~~~ 322 (323)
+|+++|+
T Consensus 294 ~~~~~ev 300 (309)
T 3umo_A 294 LCSHDDT 300 (309)
T ss_dssp CCCHHHH
T ss_pred CCCHHHH
Confidence 8887653
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=318.46 Aligned_cols=285 Identities=24% Similarity=0.337 Sum_probs=240.4
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCc-EEEEeeeecCchhHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~-v~~~~~vG~D~~g~~i~~~l 82 (323)
-++|+|+|++++|++..+++ +|.+++..+..+....+||++.|+|.+|++ +| .+ +.++|.+|+|.+|+.+++.|
T Consensus 14 ~~~v~vvG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~i~~vG~D~~G~~l~~~L 88 (311)
T 1vm7_A 14 FLVISVVGSSNIDIVLKVDH--FTKPGETQKAIEMNVFPGGKGANQAVTVAK-IG--EKGCRFVTCIGNDDYSDLLIENY 88 (311)
T ss_dssp CCCEEEECCCEEEEEEECSS--CCCTTCEEECSEEEEEEECHHHHHHHHHHH-HH--SSCEEEEEEECSSHHHHHHHHHH
T ss_pred cCCEEEECcceeeEEEeccc--CCCCCceEecCeeeecCCCHHHHHHHHHHH-cC--CCceEEEEEECCChHHHHHHHHH
Confidence 35899999999999999998 777788888888889999999999999998 66 89 99999999999999999999
Q ss_pred HHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 83 KLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 83 ~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
++.|| ++. .++.+|+.++++++ +|+|+++.+.++...+++++++ .+.+++++++++++. .+.+.+..
T Consensus 89 ~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~~v~~~~~---~~~~~~~~- 157 (311)
T 1vm7_A 89 EKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESDILLLQNE---IPFETTLE- 157 (311)
T ss_dssp HHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC----HHHHTTCSEEEECSS---SCHHHHHH-
T ss_pred HHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC----hhhcccCCEEEEeCC---CCHHHHHH-
Confidence 99999 554 46678999998887 5888888777777778777765 355789999999763 34444433
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
.+++.+.++++|+... .+....+++.+|++++|++|++.+++....+.++++++++.+ .+.+.+.+
T Consensus 158 --~a~~~~~~v~~Dp~~~------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~v 223 (311)
T 1vm7_A 158 --CAKRFNGIVIFDPAPA------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKF------LELGVKNV 223 (311)
T ss_dssp --HHHHCCSEEEECCCSC------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHH------HHTTCSEE
T ss_pred --HHHHcCCEEEEeCcch------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCCEE
Confidence 3778899999999752 122457889999999999999999886444456788888888 66789999
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--CCC
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPE 318 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p~ 318 (323)
++|+|++|++++++++.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+. +|+
T Consensus 224 vvT~G~~G~~~~~~~~~~~~~~~~---v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~ 300 (311)
T 1vm7_A 224 IVKLGDKGVLLVNKNEKKHFPTFK---VKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPA 300 (311)
T ss_dssp EEECGGGCEEEEETTEEEEECCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSGGGCCC
T ss_pred EEEECCCCeEEEeCCceEEecCCC---cccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcCCccccCCC
Confidence 999999999999888877777644 478999999999999999999999999999999999999999999984 676
Q ss_pred CCC
Q 020650 319 KPE 321 (323)
Q Consensus 319 ~~~ 321 (323)
.+|
T Consensus 301 ~~e 303 (311)
T 1vm7_A 301 REE 303 (311)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=316.66 Aligned_cols=297 Identities=20% Similarity=0.244 Sum_probs=235.2
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++..... .|. .........+||++.|+|.++++ +| .++.++|.+|+|.+|+++++
T Consensus 8 ~~~~~~i~viG~~~~D~~~~~~~--~~~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~l~~ 78 (332)
T 2qcv_A 8 TDREFDLIAIGRACIDLNAVEYN--RPM----EETMTFSKYVGGSPANIVIGSSK-LG--LKAGFIGKIADDQHGRFIES 78 (332)
T ss_dssp SCCSEEEEEESCCEEEEEESSCS--SCG----GGCCCEEEEEESHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHH
T ss_pred cccCCcEEEECcceEEEecCCCC--CCc----cccceeEecCCCHHHHHHHHHHH-cC--CceEEEEEeCCCHHHHHHHH
Confidence 34456999999999999987654 221 23456788999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cC-CCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEecccccc--C
Q 020650 81 NSKLAGVNVHYYE-DE-SASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV--S 153 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~-~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~--~ 153 (323)
.|+++||+++++. .+ +.+|+.+++.++ +|+++++.+. +++..++++++.. ..+++++++|++|+.+.. +
T Consensus 79 ~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~v~~~g~~~~~~~~ 154 (332)
T 2qcv_A 79 YMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE----AYIRRSKLLLVSGTALSKSPS 154 (332)
T ss_dssp HHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH----HHHTTEEEEEEEGGGGSSTTH
T ss_pred HHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH----HHHccCCEEEEeCccccCchh
Confidence 9999999999985 33 357888887765 5777665443 2445666666652 457899999999976432 2
Q ss_pred HHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcC
Q 020650 154 PDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~ 229 (323)
.+.+..+++.+++.+.++++|+.. ..|. ....+.++.+++++|++++|++|++.+++... .++..++++.+
T Consensus 155 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~--~~~~~~~~~~l--- 229 (332)
T 2qcv_A 155 REAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTE--KGDNDETIRYL--- 229 (332)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSS--CCCHHHHHHHH---
T ss_pred HHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCc--CCCHHHHHHHH---
Confidence 367889999999999999999864 2221 22344567789999999999999999987432 24677888888
Q ss_pred CccccCCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHH
Q 020650 230 PKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 230 ~~~~~~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~ 308 (323)
.+.+++.++||+|++|++++++ ++.++++++++ +++||+||||+|.|+|+++|++|+++++|+++|+++|+++
T Consensus 230 ---~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 303 (332)
T 2qcv_A 230 ---FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIV 303 (332)
T ss_dssp ---TTSSCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ---HHcCCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 6678999999999999999887 56777776544 7899999999999999999999999999999999999999
Q ss_pred hhhcCcc--CCCCCC
Q 020650 309 IQRSGCT--YPEKPE 321 (323)
Q Consensus 309 ~~~~G~~--~p~~~~ 321 (323)
+++.|+. +|+++|
T Consensus 304 v~~~G~~~~~p~~~e 318 (332)
T 2qcv_A 304 VSKHSSSDAMPSVEE 318 (332)
T ss_dssp HHC-----CCCCHHH
T ss_pred HccCCCccCCCCHHH
Confidence 9999984 666544
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=320.34 Aligned_cols=291 Identities=17% Similarity=0.192 Sum_probs=234.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|.++|+|++++|++..+++ + .+++..+.......+||++.|+|.++++ +| .++.++|.+|+ .+|+.+++.|++
T Consensus 21 Mi~~v~G~~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~-~~G~~l~~~L~~ 93 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTA--L-KLDDVNRVQEVSKTAGGKGLNVTRVLAQ-VG--EPVLASGFIGG-ELGQFIAKKLDH 93 (330)
T ss_dssp CEEEEESSCEEEEEEEESC--C-CTTSEEEESCCEEEEECHHHHHHHHHHH-HT--CCEEEEEEEEH-HHHHHHHHHHHH
T ss_pred EEEEEecchhheEEEecCC--c-cCCceEEeceEEEcCCchHHHHHHHHHH-hC--CCeEEEEEecc-hhHHHHHHHHHH
Confidence 5788999999999999987 4 5677788888899999999999999998 66 99999999997 699999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccccEEEEecccc-ccCHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYIAGFFL-TVSPDSIQLVA 161 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~ 161 (323)
.||+++++...+ .|++++++++.++++.+...++ .+++++++.. ...+.++++|++|++++.+ ..+.+.+.+++
T Consensus 94 ~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 170 (330)
T 2jg1_A 94 ADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQII 170 (330)
T ss_dssp TTCEECCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHH
T ss_pred CCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHH
Confidence 999999986543 4777777776445544433332 3444443320 0113467899999988654 34567889999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC---CCcEEEeCHHHHHHHHhhcCC-CCCCHHHHHHHHhcCCccccCCc
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLP---YMDYIFGNETEARTFSKVQGW-ETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~e~~~l~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
+.+++.+.++++|+.+.. +.++++ .+|++++|++|++.+++.... +.++++++++.+ .+.+.
T Consensus 171 ~~a~~~g~~v~~D~~~~~--------l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l------~~~g~ 236 (330)
T 2jg1_A 171 ERCQNKGVPVILDCSGAT--------LQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQP------LFEGI 236 (330)
T ss_dssp HHHHTTTCCEEEECCHHH--------HHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSG------GGTTC
T ss_pred HHHHHCCCEEEEECCcHH--------HHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHH------HHcCC
Confidence 999999999999997432 445565 899999999999999874321 223466677777 66789
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
+.+++|+|++|++++++++.+++|+++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.|+.+|
T Consensus 237 ~~VvvT~G~~Ga~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~G~~~~ 313 (330)
T 2jg1_A 237 EWIIVSLGAQGAFAKHNHTFYRVNIPT---ISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYV 313 (330)
T ss_dssp SEEEEECGGGCEEEEETTEEEEEECCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCC
T ss_pred CEEEEeecCCceEEEeCCCEEEEeCCC---ccccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 999999999999999888888887654 47999999999999999999999999999999999999999999999888
Q ss_pred CCCCC
Q 020650 318 EKPEF 322 (323)
Q Consensus 318 ~~~~~ 322 (323)
+++|+
T Consensus 314 ~~~ev 318 (330)
T 2jg1_A 314 NLNNY 318 (330)
T ss_dssp CGGGH
T ss_pred CHHHH
Confidence 87664
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=317.56 Aligned_cols=284 Identities=20% Similarity=0.270 Sum_probs=230.5
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++...+ +...+..+....+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|++.
T Consensus 3 ~v~viG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~i~~vG~D~~g~~~~~~l~~~ 72 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNP-------GPLRFVNYFEKHVAGSELNFCIAVVR-NH--LSCSLIARVGNDEFGKNIIEYSRAQ 72 (313)
T ss_dssp CEEEECCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHHHHHHT
T ss_pred eEEEECcceEEEecCCC-------CcccccceeEecCCChHHHHHHHHHH-CC--CcEEEEEEeCCCHHHHHHHHHHHHc
Confidence 79999999999986322 34455667788999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEE--Ee-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEecccccc---CHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVC--VV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV---SPDS 156 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~--~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~---~~~~ 156 (323)
||+++++. .++.+|+.+++. ++ +|+|++..+. ++...++++++.. ..+++++++|++++.+.+ +.+.
T Consensus 73 gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~ 148 (313)
T 2v78_A 73 GIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE----NYVRNSRLVHSTGITLAISDNAKEA 148 (313)
T ss_dssp TCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSSEEEEEHHHHHHCHHHHHH
T ss_pred CCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH----HHhcCCCEEEEcCchhhcChHHHHH
Confidence 99999986 466789999987 65 6777765443 4556677776653 457899999999876532 2356
Q ss_pred HHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCc--EEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 157 IQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMD--YIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~d--vl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.++++.+++. ++|+. ...|. ....+.++++++++| ++++|++|++.+++ .++++++++.+
T Consensus 149 ~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-----~~~~~~~~~~l---- 215 (313)
T 2v78_A 149 VIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-----VTDPDEAYRKY---- 215 (313)
T ss_dssp HHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS-----CCCHHHHHHHH----
T ss_pred HHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC-----CCCHHHHHHHH----
Confidence 66677766554 56664 33442 223456778899999 99999999999986 35788888888
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
...|++.+++|+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++++
T Consensus 216 --~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v~ 290 (313)
T 2v78_A 216 --KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVIT 290 (313)
T ss_dssp --HHTTEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred --HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 667899999999999999998888888886544 799999999999999999999999999999999999999999
Q ss_pred hcCcc--CCCCCC
Q 020650 311 RSGCT--YPEKPE 321 (323)
Q Consensus 311 ~~G~~--~p~~~~ 321 (323)
+.|+. .|++++
T Consensus 291 ~~G~~~~~~~~~~ 303 (313)
T 2v78_A 291 VRGDNELTPTLED 303 (313)
T ss_dssp SSSSSTTCCCHHH
T ss_pred cCCCCCCCCCHHH
Confidence 99995 466544
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=327.59 Aligned_cols=291 Identities=18% Similarity=0.163 Sum_probs=229.6
Q ss_pred cceEEEeCCceeeeEee--cChhH--HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 4 EGILLGMGNPLLDISSV--VDDDF--LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~--~~~~~--~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
+++|+|+|++++|++.. +++.. .|.+ ..........+||. .|+|.+|++ +| .++.++|.+|+|.+|+.++
T Consensus 53 ~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~--~~~~~~~~~~~GG~-~NvA~~la~-LG--~~v~~ig~vG~D~~G~~i~ 126 (352)
T 4e84_A 53 RSRVLVVGDVMLDRYWFGNVDRISPEAPVP--VVHVQRQEERLGGA-ANVARNAVT-LG--GQAGLLCVVGCDEPGERIV 126 (352)
T ss_dssp TCEEEEEECEEEEEEEEEEEEEECSSSSSE--EEEEEEEEEEEEEH-HHHHHHHHH-TT--CEEEEEEEEESSHHHHHHH
T ss_pred CCcEEEECccceEEEEeecccccCCCCCcc--eEEeeEEEEecChH-HHHHHHHHH-cC--CCEEEEEEeCCChhHHHHH
Confidence 46899999999999876 44411 1332 35666788899998 899999998 56 9999999999999999999
Q ss_pred HHHHHcCceeEEeecCCCCceeEEEEEeCCccc-eeecc-cccccCCcccCCCcchhhhhccccEEEEeccccccCHHHH
Q 020650 80 KNSKLAGVNVHYYEDESASTGTCAVCVVGGERS-LVANL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157 (323)
Q Consensus 80 ~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 157 (323)
+.|+++||++..+..++.+|+.++++.+++.+. .+... +.......+.++ ...+.++++|+++++++.. .+.+.+
T Consensus 127 ~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~~g~~~-~~~~~~ 203 (352)
T 4e84_A 127 ELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLA--RFDVLLPQHDVVLMSDYAK-GGLTHV 203 (352)
T ss_dssp HHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHH--HHHHHGGGCSEEEEECCSS-SSCSSH
T ss_pred HHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHH--HHHHhcccCCEEEEeCCCC-CCHHHH
Confidence 999999999966667777899998888754443 23221 111111111111 1335688999999998652 234458
Q ss_pred HHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc-CC
Q 020650 158 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE-IR 236 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~-~~ 236 (323)
..+++.+++.+.++++|+++..| .+++.+|++++|++|++.+++ ...+.++++++++.+ .. .+
T Consensus 204 ~~~~~~a~~~g~~v~~D~~~~~~---------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l------~~~~g 267 (352)
T 4e84_A 204 TTMIEKARAAGKAVLVDPKGDDW---------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANL------RAELD 267 (352)
T ss_dssp HHHHHHHHHTTCEEEEECCSSCC---------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHH------HHHHT
T ss_pred HHHHHHHHhcCCEEEEECCCcch---------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHH------HHHhC
Confidence 88999999999999999976432 578999999999999999987 222234566777777 43 58
Q ss_pred ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC
Q 020650 237 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY 316 (323)
Q Consensus 237 ~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~ 316 (323)
++.++||+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|+.+
T Consensus 268 ~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~~Ga~~ 344 (352)
T 4e84_A 268 IDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTAT 344 (352)
T ss_dssp CSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred CCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCcc
Confidence 89999999999999999888888887544 799999999999999999999999999999999999999999999988
Q ss_pred CCCCCC
Q 020650 317 PEKPEF 322 (323)
Q Consensus 317 p~~~~~ 322 (323)
|+++|+
T Consensus 345 ~t~~el 350 (352)
T 4e84_A 345 VDYDEL 350 (352)
T ss_dssp CCHHHH
T ss_pred CCHHHh
Confidence 877654
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=317.59 Aligned_cols=293 Identities=18% Similarity=0.170 Sum_probs=232.6
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|.++|+|++++|++..+++ |.+++..+..+....+||++.|+|.+|++ +| .++.++|.+|+ .+|+++++.|++
T Consensus 3 m~i~v~g~~~~D~~~~v~~---~~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~-~~G~~i~~~L~~ 75 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH---LKLDTVNRTSQVTKTPGGKGLNVTRVIHD-LG--GDVIATGVLGG-FHGAFIANELKK 75 (323)
T ss_dssp CEEEEESSCEEEEEEECSC---CCTTSEEEESCEEEEEESHHHHHHHHHHH-HT--CCEEEEEEEEH-HHHHHHHHHHHH
T ss_pred eEEEEecCceeEEEEecCC---cccCCEEEeceEEEcCCcHHHHHHHHHHH-cC--CCeEEEEEecc-chHHHHHHHHHH
Confidence 5899999999999999987 36678888888999999999999999998 66 99999999997 589999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccccEEEEeccccc-cCHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYIAGFFLT-VSPDSIQLVA 161 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~~~~~~-~~~~~~~~~~ 161 (323)
.||+++++...+ .|++++.+++.++++.+...++ .+++++++.. ...+.++++|+++++++.+. .+.+.+..++
T Consensus 76 ~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 152 (323)
T 2f02_A 76 ANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELV 152 (323)
T ss_dssp TTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHH
T ss_pred CCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHH
Confidence 999999986543 4777777666445444333332 3555444320 11134678999999886642 3457889999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC-CC-CCHHHHHHHHhcCCccccCCccE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-ET-DDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+.+++.+.++++|+.... ..+.+..+ +.+|++++|++|++.+++.... +. +++.++++.+ .+.|++.
T Consensus 153 ~~a~~~g~~v~~Dp~~~~----~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l------~~~g~~~ 221 (323)
T 2f02_A 153 QKAHAQEVKVLLDTSGDS----LRQVLQGP-WKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKP------MFAGIEW 221 (323)
T ss_dssp HHHHHTTCEEEEECCTHH----HHHHHHSS-CCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSG------GGTTCSE
T ss_pred HHHHHCCCEEEEECChHH----HHHHHhcc-CCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHH------HHcCCCE
Confidence 999999999999997543 22222221 6999999999999999874322 22 3455666666 5678999
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCC
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~ 319 (323)
+++|+|++|++++++++.+++++++ ++++|||||||+|.|+|+++|++|+++++|+++|+++|++++++.|+.+|++
T Consensus 222 vvvt~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~ 298 (323)
T 2f02_A 222 IVISLGKDGAIAKHHDQFYRVKIPT---IQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTGHVDV 298 (323)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSSSCCCH
T ss_pred EEEeecCCceEEEeCCCEEEEcCCC---ccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCcCCCCH
Confidence 9999999999999888888887654 4799999999999999999999999999999999999999999999988876
Q ss_pred CC
Q 020650 320 PE 321 (323)
Q Consensus 320 ~~ 321 (323)
+|
T Consensus 299 ~e 300 (323)
T 2f02_A 299 EN 300 (323)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=315.91 Aligned_cols=284 Identities=19% Similarity=0.229 Sum_probs=230.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++...+ +...+..+....+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~v~viG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~D~~g~~i~~~l~~ 71 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP-------GPLRHVSYFEKHVAGSEANYCVAFIK-QG--NECGIIAKVGDDEFGYNAIEWLRG 71 (311)
T ss_dssp CEEEEESCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHHH
T ss_pred CCEEEECCceEEEecCCC-------CcccccceeeecCCChHHHHHHHHHH-CC--CceEEEEEeCCCHHHHHHHHHHHH
Confidence 489999999999987332 33455667788999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCc--cceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccc---cCHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGE--RSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPD 155 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~---~~~~ 155 (323)
+||+++++. .++.+|+.+++..+ +|+ |+++.+. ++...++++++.. ..+++++++|++++.+. .+.+
T Consensus 72 ~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~ 147 (311)
T 2dcn_A 72 QGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSADLVHSSGITLAISSTAKE 147 (311)
T ss_dssp TTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTCSEEEEEHHHHHSCHHHHH
T ss_pred cCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh----HHHcCCCEEEEeCcccccChHHHH
Confidence 999999986 46678999988876 677 7765442 4556677776653 45789999999987653 2345
Q ss_pred HHHHHHHHHHhCCCeEEEeCC--chhHH-HHHHHHHHhhcC--CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 156 SIQLVAEHAAANNKVFMMNLS--APFIC-EFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~--~~~~~-~~~~~~~~~~l~--~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
.+.++++.+++. ++|+. ...|. ....+.++.+++ ++|++++|++|++.+++ .++++++++.+
T Consensus 148 ~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l---- 214 (311)
T 2dcn_A 148 AVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----ESDPDKAAKAF---- 214 (311)
T ss_dssp HHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS-----CCCHHHHHHHH----
T ss_pred HHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC-----CCCHHHHHHHH----
Confidence 667777776654 56664 33442 223455778899 99999999999999986 35788888888
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
... .+.+++|+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++++
T Consensus 215 --~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~ 288 (311)
T 2dcn_A 215 --SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVM 288 (311)
T ss_dssp --TTT-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTT
T ss_pred --HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 556 88999999999999998888888886544 799999999999999999999999999999999999999999
Q ss_pred hcCcc--CCCCCC
Q 020650 311 RSGCT--YPEKPE 321 (323)
Q Consensus 311 ~~G~~--~p~~~~ 321 (323)
+.|+. .|++++
T Consensus 289 ~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 289 IRGDQENLPTTKD 301 (311)
T ss_dssp SSSSSTTCCCHHH
T ss_pred cCCCCCCCCCHHH
Confidence 99985 466544
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=317.65 Aligned_cols=288 Identities=20% Similarity=0.220 Sum_probs=235.3
Q ss_pred CCccceEEEeCCceeee-EeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 1 MAQEGILLGMGNPLLDI-SSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~-~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
|+| .+.|.+++++|+ +..+++ + .+++..+.......+||++.|+|.+|++ +| .++.++|.+|+| +|+.++
T Consensus 1 ~~m--i~tvt~np~iD~~~~~v~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~d-~g~~i~ 71 (320)
T 3ie7_A 1 MSL--IYTITLNPAIDRLLFIRGE--L-EKRKTNRVIKTEFDCGGKGLHVSGVLSK-FG--IKNEALGIAGSD-NLDKLY 71 (320)
T ss_dssp -CC--EEEEESSCEEEEEEEESSS--C-CTTSCCCCSEEEEEEESHHHHHHHHHHH-HT--CCEEEEEEEEST-THHHHH
T ss_pred Cce--EEEEecchHHeeeEEEcCC--c-cCCCeeEeceeeecCCchHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHH
Confidence 564 789999999999 999998 5 6788889899999999999999999998 66 999999999998 999999
Q ss_pred HHHHHcCceeEEe-ecCCCCceeEEEEEeCCc--cceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccC
Q 020650 80 KNSKLAGVNVHYY-EDESASTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVS 153 (323)
Q Consensus 80 ~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~ 153 (323)
+.|++.||+++++ ...+ +|+.+++++++|+ |+++...+ ..++++++.. ....+.++++++++++|+.+ ..+
T Consensus 72 ~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 148 (320)
T 3ie7_A 72 AILKEKHINHDFLVEAGT-STRECFVVLSDDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYT 148 (320)
T ss_dssp HHHHHTTCCBCCEEETTC-CCEEEEEEEETTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCC
T ss_pred HHHHHcCCceEEEEecCC-CCceEEEEEECCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCC
Confidence 9999999999999 5555 8999998888777 77655444 2445444432 01224578899999998764 345
Q ss_pred HHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 154 PDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
.+.+..+++.+++.+.++++|+.... +.+.+. .+|++++|++|++.+++... .+..+.+..+
T Consensus 149 ~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~dil~~N~~E~~~l~g~~~---~~~~~~~~~~------ 211 (320)
T 3ie7_A 149 LSDFKELLRTVKATGAFLGCDNSGEY--------LNLAVEMGVDFIKPNEDEVIAILDEKT---NSLEENIRTL------ 211 (320)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCHHH--------HHHHHHHCCSEECCBTTGGGGGSCTTC---CCHHHHHHHH------
T ss_pred HHHHHHHHHHHHhcCCEEEEECChHH--------HHHHHhcCCeEEeeCHHHHHHHhCCCc---CCCHHHHHHH------
Confidence 68899999999999999999997432 344444 89999999999999876421 1123333444
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
... .+.+++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+++|+++|+++|++.
T Consensus 212 ~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~ 287 (320)
T 3ie7_A 212 AEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQ 287 (320)
T ss_dssp TTT-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSS
T ss_pred Hhh-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCc
Confidence 223 88999999999999999998888887544 79999999999999999999999999999999999999999999
Q ss_pred CccCCCCCC
Q 020650 313 GCTYPEKPE 321 (323)
Q Consensus 313 G~~~p~~~~ 321 (323)
|+..|+++|
T Consensus 288 G~~~~~~~e 296 (320)
T 3ie7_A 288 DSSSFDLEA 296 (320)
T ss_dssp SSSCCCHHH
T ss_pred CCCCCCHHH
Confidence 998887755
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=319.36 Aligned_cols=299 Identities=16% Similarity=0.162 Sum_probs=218.1
Q ss_pred CccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 2 ~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
+||++|+++|++++|+....+ ....+..+....+||.+.|+|.+|++ +| .++.++|.+|+|.+|+.+++.
T Consensus 22 ~mm~kv~~~GE~m~~l~p~~~-------~~~~~~~~~~~~~GG~~aNvA~~lar-LG--~~~~~ig~vG~D~~G~~l~~~ 91 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQQG-------IPFSQTTALDIHIGGAEANVAVNLSK-LG--HPTRIATVVPANPIGKMAVEH 91 (351)
T ss_dssp ---CEEEEECCCEEEEECCTT-------CCGGGCSEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHHH
T ss_pred hccCCEEEEcceeEEecCCCC-------CCccccCeEEEecCChHHHHHHHHHH-cC--CCeEEEEEeCCCHHHHHHHHH
Confidence 355699999999999875432 23455667889999999999999998 56 999999999999999999999
Q ss_pred HHHcCceeEEeecCCCCceeEEEEE-eCCccceeeccccc---ccCCcccCCCcchhhhhccccEEEEeccccccCH---
Q 020650 82 SKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANLSAA---NCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--- 154 (323)
Q Consensus 82 l~~~gi~~~~~~~~~~~t~~~~~~~-~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~--- 154 (323)
|+++||+++++...+.+++.+.+.. +++....+.+.... ..+...++. ..+.+++++++|++++.+..++
T Consensus 92 L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~~~~~~~~g~~l~~~~~~~ 168 (351)
T 4gm6_A 92 LWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKGIRVLHVSGITIALSTFWL 168 (351)
T ss_dssp HHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTTEEEEEEEHHHHHHCHHHH
T ss_pred HHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhhcccceecccchhhchhHH
Confidence 9999999999865444455544444 33333333332222 123333332 3456889999999998765443
Q ss_pred HHHHHHHHHHHhCCCeEEEeC--CchhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCc
Q 020650 155 DSIQLVAEHAAANNKVFMMNL--SAPFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~--~~~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~ 231 (323)
+.+.++++.++++|+++++|+ ++..|. +..++.+.++++++|++++|++|+..+++......+..+...+...+..
T Consensus 169 ~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~- 247 (351)
T 4gm6_A 169 EMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIE- 247 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCC-
T ss_pred HHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhh-
Confidence 678899999999999988877 455564 3356667889999999999999999998754332222333333332110
Q ss_pred cccCCccEEEEeeCC--CceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 232 ASEIRKRTAVITQGA--DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 232 ~~~~~~~~vvit~G~--~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
...+.+..+++.+. .++.++..++.++.+++++ .+++|||||||+|.|||+++|++|+++++|+++|+++|+++|
T Consensus 248 -~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~VvDttGAGDaF~ag~l~~l~~g~~~~~al~~A~aaaal~v 324 (351)
T 4gm6_A 248 -LFYATKRTVISASHHLLQGHLWTQGECWESEEYAI--YPIVDRVGGGDAYTAAVLHGILSEWRPDETVKFATAAAGLKH 324 (351)
T ss_dssp -EEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE--CSCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred -hhhccccceeeeccCCceEEEEeCCceEEeCCCCC--CCcCCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHh
Confidence 11233444555444 4567778888877776543 379999999999999999999999999999999999999999
Q ss_pred hhcCccCC
Q 020650 310 QRSGCTYP 317 (323)
Q Consensus 310 ~~~G~~~p 317 (323)
++.|+.+|
T Consensus 325 ~~~Ga~~~ 332 (351)
T 4gm6_A 325 SIHGDINP 332 (351)
T ss_dssp TSSSSSCC
T ss_pred CCCCCCCC
Confidence 99998544
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=319.83 Aligned_cols=285 Identities=20% Similarity=0.299 Sum_probs=223.3
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++.... ......+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++
T Consensus 21 ~~~m~~ilviG~~~~D~~~~~~-------------~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~G~~i~~ 84 (339)
T 1tyy_A 21 MKAMNKVWVIGDASVDLVPEKQ-------------NSYLKCPGGASANVGVCVAR-LG--GECGFIGCLGDDDAGRFLRQ 84 (339)
T ss_dssp ----CCEEEESCCEEEEEECSS-------------SEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHH
T ss_pred ccccCCEEEECcceeEEeccCC-------------CceEEcCCCHHHHHHHHHHH-cC--CCeEEEEeeCCCHHHHHHHH
Confidence 4444589999999999998631 23567899999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEecccc--ccCH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFL--TVSP 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~--~~~~ 154 (323)
.|++.||+++++. .++.+|+.+++.++ +|+|++..+. +++..++++.. +.++++++++++++.+ ..+.
T Consensus 85 ~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~------~~l~~~~~v~~~~~~l~~~~~~ 158 (339)
T 1tyy_A 85 VFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL------PPFRQYEWFYFSSIGLTDRPAR 158 (339)
T ss_dssp HHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC------CCCCTTCEEEEEHHHHSSHHHH
T ss_pred HHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchh------hHhccCCEEEEcchhhcCcccH
Confidence 9999999999986 46678999988776 6888765543 44445544422 3367899999998653 2334
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.+..+++.+++.+.++++|+.. ..|. ....+.++++++.+|++++|++|++.+++. ++++++++.+
T Consensus 159 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~~~~l---- 229 (339)
T 1tyy_A 159 EACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA-----SHWQDARYYL---- 229 (339)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-----SSGGGGSSTT----
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHH----
Confidence 67888999999999999999853 2221 123455678889999999999999999873 3555666666
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC-----CCHHHHHHHHhHHH
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE-----KPIEECVRAGCYTS 305 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g-----~~~~~a~~~A~~~A 305 (323)
.+.+++.+++|+|++|++++++++.+++|+++ ++++|||||||+|.|+|+++|++| +++++|+++|+++|
T Consensus 230 --~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~~a~~~A~a~a 304 (339)
T 1tyy_A 230 --RDLGCDTTIISLGADGALLITAEGEFHFPAPR---VDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACG 304 (339)
T ss_dssp --GGGTCSCEEEECGGGCEEEESSSCEEEECCCC---CCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHH
T ss_pred --HHcCCCEEEEEECCCceEEEeCCceEEcCCCC---CCcCCCCCchHHHHHHHHHHHHhccccccccHHHHHHHHHHHH
Confidence 56688999999999999999877778887654 479999999999999999999997 89999999999999
Q ss_pred HHHhhhcCcc--CCCCCC
Q 020650 306 HVIIQRSGCT--YPEKPE 321 (323)
Q Consensus 306 a~~~~~~G~~--~p~~~~ 321 (323)
++++++.|+. +|+.+|
T Consensus 305 a~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 305 AMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp HHGGGSSSTTTTCCCHHH
T ss_pred HHHhCCCCCCCCCCCHHH
Confidence 9999999984 466543
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-44 Score=313.43 Aligned_cols=287 Identities=17% Similarity=0.168 Sum_probs=225.5
Q ss_pred EE-EeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 7 LL-GMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 7 i~-viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
|+ |.|++++|++..+++ + .+++..+..+....+||++.|+|.++++ +| .++.++|.+|+| +|+++++.|+++
T Consensus 4 I~~v~g~~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~d-~g~~i~~~l~~~ 76 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITPQ--I-YPEGKLRCTAPVFEPGGGGINVARAIAH-LG--GSATAIFPAGGA-TGEHLVSLLADE 76 (309)
T ss_dssp EEEECSSCEEEEEEEESC--C-CSSSEEECCCCEEEEESHHHHHHHHHHH-TT--CCEEEEEEECHH-HHHHHHHHHHHT
T ss_pred EEEEeccchheEEEEcCC--C-cCCCeeeccceeecCCchHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHHHHHHHc
Confidence 55 667999999999987 3 5677888888999999999999999998 56 999999999998 899999999999
Q ss_pred CceeEEeecCCCCceeEEEE-Ee-CCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVC-VV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLV 160 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~ 160 (323)
||+++++...+ .|++++.+ ++ +|+++++...++ .+++++++. ....+.+++ +++|++|+.+ ..+.+.+..+
T Consensus 77 gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~ 152 (309)
T 3cqd_A 77 NVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQL 152 (309)
T ss_dssp TCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHH
T ss_pred CCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHH
Confidence 99999986543 36666665 55 577655544443 344443321 001123567 9999998654 2346788999
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCC-cEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC-c
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYM-DYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR-K 237 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~l~~~-dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~ 237 (323)
++.+++.+.++++|+.... +.. +.+.+ |++++|++|++.+++....+.+++.++++.+ ...| +
T Consensus 153 ~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 218 (309)
T 3cqd_A 153 ISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEI------VNSGKA 218 (309)
T ss_dssp HHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHH------HHTTSB
T ss_pred HHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCC
Confidence 9999999999999997432 333 34788 9999999999999885444445677888888 5667 8
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
+.+++|+|++|++++++++.+++|+++ ++++|||||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+.+|
T Consensus 219 ~~vvvt~G~~G~~~~~~~~~~~~~~~~---v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~~~~G~~~~ 295 (309)
T 3cqd_A 219 KRVVVSLGPQGALGVDSENCIQVVPPP---VKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLC 295 (309)
T ss_dssp SCEEEECGGGCEEEECSSCEEEECCCS---CCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTC-----CC
T ss_pred CEEEEEecCCceEEEECCceEEEeCCc---cccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999998877777777644 47999999999999999999999999999999999999999999999888
Q ss_pred CCCC
Q 020650 318 EKPE 321 (323)
Q Consensus 318 ~~~~ 321 (323)
+++|
T Consensus 296 ~~~~ 299 (309)
T 3cqd_A 296 SHDD 299 (309)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7654
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=308.92 Aligned_cols=282 Identities=21% Similarity=0.272 Sum_probs=227.5
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|+|+|+|++++|++...+ +...+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~i~viG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~D~~g~~i~~~L~~ 71 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEP-------GHLRGKRLLEVYVGGAEVNVAVALAR-LG--VKVGFVGRVGEDELGAMVEERLRA 71 (309)
T ss_dssp CSEEEESCCEEEEECSSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-HT--CCEEEEEEECSSHHHHHHHHHHHH
T ss_pred CcEEEEccceEEEecCCC-------CcccchheeeeecCcHHHHHHHHHHH-cC--CCeEEEEEeCCCHHHHHHHHHHHH
Confidence 379999999999985322 23455566788999999999999998 66 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccc---cCHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSI 157 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~---~~~~~~ 157 (323)
.||+++++. .++ +|+.+++..+ +|+|++..+. ++...++++++.. ..+++++++|++++.+. .+.+.+
T Consensus 72 ~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~ 146 (309)
T 1v1a_A 72 EGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRFLHLSGITPALSPEARAFS 146 (309)
T ss_dssp HTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSEEEEETTGGGSCHHHHHHH
T ss_pred cCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh----hHhcCCCEEEEeCchhccCchHHHHH
Confidence 999999986 456 8999988775 6777765443 4555677766653 45788999999998753 234678
Q ss_pred HHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc
Q 020650 158 QLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE 234 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (323)
..+++.+++.+.++++|+.. ..|. ....+.++++++++|++++|++|++.+++.. +++++ .
T Consensus 147 ~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~-------~~~~~---------~ 210 (309)
T 1v1a_A 147 LWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV-------EEALR---------A 210 (309)
T ss_dssp HHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-------HHHHH---------H
T ss_pred HHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-------HHHHH---------h
Confidence 88999999999999999864 2332 2234567789999999999999999998631 34433 1
Q ss_pred CCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 235 IRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
.+++.+++|+|++|+++ ++ ++.+++|+++ ++++|||||||+|.|+|+++|++|+++++|+++|+++|++++++.|
T Consensus 211 ~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~---v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G 286 (309)
T 1v1a_A 211 LSAPEVVLKRGAKGAWA-FVDGRRVEGSAFA---VEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRG 286 (309)
T ss_dssp TCCSEEEEECGGGCEEE-EETTEEEECCCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSST
T ss_pred cCCCEEEEEecCCCeeE-ecCCcEEEeCCCC---CCcCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC
Confidence 36889999999999998 55 6677777654 3789999999999999999999999999999999999999999999
Q ss_pred cc--CCCCCC
Q 020650 314 CT--YPEKPE 321 (323)
Q Consensus 314 ~~--~p~~~~ 321 (323)
+. .|++++
T Consensus 287 ~~~~~~~~~~ 296 (309)
T 1v1a_A 287 DHEGAPYRED 296 (309)
T ss_dssp TTTTCCCHHH
T ss_pred CCcCCCCHHH
Confidence 85 466544
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=319.41 Aligned_cols=289 Identities=15% Similarity=0.143 Sum_probs=231.6
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhc---CCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASK---YNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~---~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
|.|+|+|++++|++..+++ |.+++.... .+....+||++.|+|.+|++ +| .++.++|.+|+| +|+++++.
T Consensus 13 ~~~~v~G~~~vD~~~~~~~---~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~d-~G~~i~~~ 85 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIED---FQVNRLYRINDLSKTQMSPGGKGINVSIALSK-LG--VPSVATGFVGGY-MGKILVEE 85 (331)
T ss_dssp CEEEEESSCEEEEEEECTT---CCSSCEEECCSGGGEEEEEESHHHHHHHHHHH-TT--CCEEEEEEEEHH-HHHHHHHH
T ss_pred eEEEEecchHHeEEEEcCC---ccCCceEEeccccceEEecCcHHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHHHH
Confidence 6899999999999999987 356777777 78889999999999999998 56 999999999998 99999999
Q ss_pred HHHcC--ceeEEeecCCCCceeEEEEEe-CCcc-ceeecccccccCCcccCCCc--chhhhhccccEEEEecccc-ccCH
Q 020650 82 SKLAG--VNVHYYEDESASTGTCAVCVV-GGER-SLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYIAGFFL-TVSP 154 (323)
Q Consensus 82 l~~~g--i~~~~~~~~~~~t~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~~~~~-~~~~ 154 (323)
|+++| |+++++...+ .|++++++++ +|++ +.+...++ .+++++++.. ...+.+.++++++++|+.+ ..+.
T Consensus 86 L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 162 (331)
T 2ajr_A 86 LRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNE 162 (331)
T ss_dssp HHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCT
T ss_pred HHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCH
Confidence 99999 9999986544 4777777776 5777 44444333 3444443220 0123467899999997653 3345
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEEeCHHH-HHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETE-ARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~e-~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.+..+++.+++.+.++++|+.... +..++ +.+|++++|++| ++.+++....+.++++++++.+
T Consensus 163 ~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l---- 230 (331)
T 2ajr_A 163 GICNELVRLARERGVFVFVEQTPRL--------LERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKL---- 230 (331)
T ss_dssp THHHHHHHHHHHTTCEEEEECCHHH--------HHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHcCCEEEEECChHH--------HHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHH----
Confidence 7889999999999999999997532 33334 459999999999 9988764332223566777777
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEe-ceeCCCCcccCCCCcchHHHHHHHHHhh-cCCCHHHHHHHHhHHHHHH
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFP-VIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~-~~~~~~~~~~d~tGAGDaf~ag~~~~l~-~g~~~~~a~~~A~~~Aa~~ 308 (323)
.+. .+.+++|+|++|++++++++.++++ +++ ++++|||||||+|.|||+++|+ +|+++++|+++|+++|+++
T Consensus 231 --~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~l~~l~~~g~~~~~al~~A~a~aa~~ 304 (331)
T 2ajr_A 231 --AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEE---IDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAA 304 (331)
T ss_dssp --HHH-SSEEEEEETTTEEEEECSSCEEEEEESSC---CCGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred --HHh-cCEEEEeecCCceEEEeCCcEEEEecCCc---ccccCCCchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 455 8899999999999999877777777 644 4799999999999999999999 9999999999999999999
Q ss_pred hhhcCccCCCCCC
Q 020650 309 IQRSGCTYPEKPE 321 (323)
Q Consensus 309 ~~~~G~~~p~~~~ 321 (323)
+++.|+.+|+++|
T Consensus 305 v~~~G~~~~~~~e 317 (331)
T 2ajr_A 305 TRRKEKYMPDLEA 317 (331)
T ss_dssp TTSSSCCCCCHHH
T ss_pred HcCcCcCCCCHHH
Confidence 9999998887654
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=308.31 Aligned_cols=281 Identities=21% Similarity=0.291 Sum_probs=230.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|+|+|+|++++|++...+ +...+.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~v~viG~~~iD~~~~~~-------g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~g~~i~~~l~~ 71 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-------GDLKDVRLFEKHPGGAPANVAVGVSR-LG--VKSSLISKVGNDPFGEYLIEELSK 71 (313)
T ss_dssp CEEEEESCCEEEEEESSS-------SCTTTCCEEEEEEECHHHHHHHHHHH-TT--CEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CcEEEECceeeeeecCCC-------CCcccccceeecCCCHHHHHHHHHHH-CC--CCeEEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999997643 34556677889999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEeCCccceeeccc-ccccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVVGGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLV 160 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~~~ 160 (323)
.||+++++. .++.+|+.+++..++|+|+++.+.+ +...++++++. .+.+++++++|++++.+. .+.+.+..+
T Consensus 72 ~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~ 147 (313)
T 3ewm_A 72 ENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDIN----WDIVEEAKIVNFGSVILARNPSRETVMKV 147 (313)
T ss_dssp TTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCC----HHHHHHCSEEEEESGGGGSTTHHHHHHHH
T ss_pred cCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCC----HHHhCCCCEEEEcCcccCCcchHHHHHHH
Confidence 999999985 5778899998877678888877665 34567777765 256788999999997642 345778889
Q ss_pred HHHHHhCCCeEEEeCCc--hhHH---HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 161 AEHAAANNKVFMMNLSA--PFIC---EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~--~~~~---~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
++.++ .+.++++|+.. ..|. ....+.++++++.+|++++|++|++.+++.. . ...
T Consensus 148 ~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~-------------~------~~~ 207 (313)
T 3ewm_A 148 IKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQG-------------V------EVK 207 (313)
T ss_dssp HHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTT-------------C------CCC
T ss_pred HHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccC-------------c------ccc
Confidence 98887 46888899854 2332 2344567888999999999999999886521 0 112
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhh--cCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV--QEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~--~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
+.+.++||+|++|++++++++.+++|++++ +++|||||||+|.|+|+++|+ +|+++++|+++|+++|+++|++.|
T Consensus 208 ~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~A~~~aa~~v~~~G 284 (313)
T 3ewm_A 208 GSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGLDLLKLGKFANLVAALSTQKRG 284 (313)
T ss_dssp CSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHTTSCS
T ss_pred CceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccCC
Confidence 356689999999999999888888886544 799999999999999999998 999999999999999999999999
Q ss_pred c-cCCCCCCC
Q 020650 314 C-TYPEKPEF 322 (323)
Q Consensus 314 ~-~~p~~~~~ 322 (323)
+ .+|+++|+
T Consensus 285 ~~~~p~~~ev 294 (313)
T 3ewm_A 285 AWSTPRKDEL 294 (313)
T ss_dssp SCCCCCHHHH
T ss_pred CCCCCCHHHH
Confidence 8 56776543
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=307.97 Aligned_cols=280 Identities=20% Similarity=0.265 Sum_probs=227.5
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++..+++ +|.+++..+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+++++.|+
T Consensus 17 ~~~i~viG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~v~~ig~vG~D~~G~~l~~~L~ 91 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVDK--YPKEDSEIRCLSQRWQRGGNASNSCTILSL-LG--APCAFMGSMAPGHVADFVLDDLR 91 (312)
T ss_dssp CCEEEEESCCEEEEEEEESS--CCCTTCEEECSEEEEEEESHHHHHHHHHHH-HT--CCEEEEEEECSSHHHHHHHHHHH
T ss_pred CCcEEEECcceEEEeecccc--CCCccceeecccceeccCccHHHHHHHHHH-cC--CceEEEEEecCchHHHHHHHHHH
Confidence 46899999999999999887 666666666666778999999999999998 66 99999999999999999999999
Q ss_pred HcCceeEEeec-CCCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 84 LAGVNVHYYED-ESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 84 ~~gi~~~~~~~-~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
++||+++++.. ++.+|++++++++ +|+|+++.+.++...+++++++. ..+++++++|++++ .++....+
T Consensus 92 ~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~~~~----~~~~~~~~ 163 (312)
T 2hlz_A 92 RYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKWIHIEGR----NASEQVKM 163 (312)
T ss_dssp HTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEEEEEEECS----SHHHHHHH
T ss_pred HcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCCEEEEecc----CHHHHHHH
Confidence 99999998754 4567888777664 58888877766666666665543 24678999999985 35666777
Q ss_pred HHHHHhC--------CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 161 AEHAAAN--------NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 161 ~~~~~~~--------~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
++.+++. +.++++|+.... +.++++++++|++++|++|++.+ + .++++++++.+.++
T Consensus 164 ~~~a~~~~~~~~~~~~~~v~~d~~~~~------~~~~~~l~~~dil~~n~~ea~~l-g-----~~~~~~~~~~l~~~--- 228 (312)
T 2hlz_A 164 LQRIDAHNTRQPPEQKIRVSVEVEKPR------EELFQLFGYGDVVFVSKDVAKHL-G-----FQSAEEALRGLYGR--- 228 (312)
T ss_dssp HHHHHHHHTTSCGGGCCEEEEEECSCC------GGGGGGGGSSSEEEECHHHHHHT-T-----CCSHHHHHHHHGGG---
T ss_pred HHHHHHhcccccCCCCeEEEEEcccch------HHHHHHHhcCCEEEEcHHHHHHc-C-----CCCHHHHHHHHHHh---
Confidence 7777765 678889986532 33667899999999999999886 3 24678888877332
Q ss_pred ccCCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 233 SEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
...| +.+++|+|++|++++++ ++.+++|++ +.++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++
T Consensus 229 ~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~ 305 (312)
T 2hlz_A 229 VRKG-AVLVCAWAEEGADALGPDGKLLHSDAF--PPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGL 305 (312)
T ss_dssp SCTT-CEEEEECGGGCEEEECTTCCEEEECCC--CCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCC-CEEEEEecccCeEEEccCCCEEECCCC--CCCCcccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhh
Confidence 1123 89999999999999874 456777753 2347899999999999999999999999999999999999999999
Q ss_pred cCc
Q 020650 312 SGC 314 (323)
Q Consensus 312 ~G~ 314 (323)
.|+
T Consensus 306 ~G~ 308 (312)
T 2hlz_A 306 QGF 308 (312)
T ss_dssp SSS
T ss_pred cCc
Confidence 997
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=306.99 Aligned_cols=282 Identities=17% Similarity=0.233 Sum_probs=225.2
Q ss_pred eEEEeCCceeeeEeec----------ChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeec-Cch
Q 020650 6 ILLGMGNPLLDISSVV----------DDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGK-DKF 74 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~----------~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~-D~~ 74 (323)
+|+|+|++++|++..+ ++ .|..++..........+||++.|+|.+|++ +| .++.++|.+|+ | +
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~~D-~ 75 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHILPDQ--VHLINLSFLVPTMRREFGGCAGNIAYALNL-LG--GDARMMGTLGAVD-A 75 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGCCTTS--SSSCEEEEECCSCCCEEECHHHHHHHHHHH-TT--CCEEEEEEEETTT-C
T ss_pred cEEEECcceEEEEEecchhhhhhccccc--cCCCCcceecccceeccCCHHHHHHHHHHH-cC--CCeeEEEEECCcC-H
Confidence 6999999999999988 55 555555555567788999999999999998 56 99999999999 9 8
Q ss_pred hHHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEecccccc
Q 020650 75 GEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV 152 (323)
Q Consensus 75 g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~ 152 (323)
|+ +++.|++.||+++++. .++.+|+.+++.++ +|++.+..+.++...+.++++.. .++++++++++.
T Consensus 76 g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~------~~~~~~v~~~~~---- 144 (326)
T 3b1n_A 76 QP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE------AKDIKLAIVGPD---- 144 (326)
T ss_dssp HH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG------CCSCSEEEECSC----
T ss_pred HH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc------ccCCCEEEECCc----
Confidence 88 9999999999999986 46678999988886 56776655566655555554432 278999999863
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 153 SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
.++.+.++++.+++.+.++++|+...... ...+.++.+++++|++++|++|++.+++.... +.++ +
T Consensus 145 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~---~~~~----l------ 210 (326)
T 3b1n_A 145 GFQGMVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDE----I------ 210 (326)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCGGGGGG-CCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCC---CHHH----H------
T ss_pred cHHHHHHHHHHHHHCCCEEEEeCchhhhh-ccHHHHHHHHHhCCEEecCHHHHHHHhCCCCC---CHHH----H------
Confidence 35778888999999999999998642210 02344677888999999999999999875432 3333 2
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
.+ ..+.+++|+|++|++++++++.+++|+++++ .++|||||||+|.|||+++|++|+++++|+++|+++|++++++.
T Consensus 211 ~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~ 287 (326)
T 3b1n_A 211 AS-RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQ 287 (326)
T ss_dssp HT-TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSS
T ss_pred Hh-cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC
Confidence 12 2688999999999999988888888765431 37899999999999999999999999999999999999999999
Q ss_pred Ccc--CCCCCC
Q 020650 313 GCT--YPEKPE 321 (323)
Q Consensus 313 G~~--~p~~~~ 321 (323)
|+. .|+.+|
T Consensus 288 G~~~~~~~~~e 298 (326)
T 3b1n_A 288 GPQTYAPTRAE 298 (326)
T ss_dssp STTCCCCCHHH
T ss_pred CCCCCCCCHHH
Confidence 985 455443
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=305.79 Aligned_cols=286 Identities=19% Similarity=0.217 Sum_probs=230.8
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-++|.|++++|++..+++ + .++...+.......+||++.|+|.++++ +| .++.++|.+|+ .+|+.+++.|++.
T Consensus 2 i~tv~~n~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~~~~vG~-~~g~~i~~~L~~~ 74 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVEN--F-QQGVVNRSERDRKQPGGKGINVSRVLKR-LG--HETKALGFLGG-FTGAYVRNALEKE 74 (306)
T ss_dssp EEEEESSCEEEEEEECTT--C-CSSSEEECSEEEEEEECHHHHHHHHHHH-TT--CCCEEEEEEEH-HHHHHHHHHHHHT
T ss_pred EEEEecCchheEEEEcCC--c-ccCCeEEeceeEecCCchHHHHHHHHHH-cC--CCceEEEEecc-hhHHHHHHHHHHc
Confidence 578899999999999998 4 5677788888889999999999999998 56 99999999998 7999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc-chhhhhccccEEEEecccc-ccCHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP-ENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~ 163 (323)
||+++++...+ .|+.++++ .+|+|+.+...++ .+++++++.. +....++++|++|++++.+ ..+.+.+.++++.
T Consensus 75 gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 150 (306)
T 2abq_A 75 EIGLSFIEVEG-DTRINVKI-KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQI 150 (306)
T ss_dssp TCEECCEEESS-CCEEEEEE-ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHH
T ss_pred CCceEEEEcCC-CCceEEEE-eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHH
Confidence 99999986543 47777665 6777765443332 3444443220 0111157899999988654 2455788999999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
+++++.++++|+... .+.++++ ++|++++|.+|++.+++....+.+++.++++.+ .+.+.+.+++
T Consensus 151 a~~~g~~v~~D~~~~--------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vvv 216 (306)
T 2abq_A 151 AKERGAFVAVDTSGE--------ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRL------IGEGIESILV 216 (306)
T ss_dssp HHTTTCEEEEECCHH--------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHH------HHTTCCEEEE
T ss_pred HHhcCCEEEEECChH--------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEE
Confidence 999999999999742 2567888 999999999999999875433234566777777 5668899999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPE 321 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~~ 321 (323)
|+|++|++++++++.+++|+++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++. .+|+++|
T Consensus 217 t~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 217 SFAGDGALFASAEGMFHVNVPS---GEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSD--GFCTREE 290 (306)
T ss_dssp ECGGGCEEEEETTEEEEECCCC---CCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSS--SCCCHHH
T ss_pred ecCCCceEEEeCCCEEEEeCCC---ccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc--CCCCHHH
Confidence 9999999999888877877644 479999999999999999999999999999999999999999998 5566544
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=302.09 Aligned_cols=277 Identities=19% Similarity=0.235 Sum_probs=218.7
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++. . ...+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 3 ~~~v~viG~~~~D~~p---~---------------~~~~GG~~~N~A~~la~-LG--~~~~~~~~vG~D~~g~~~~~~l~ 61 (296)
T 2qhp_A 3 NNIIVGMGEALWDVLP---E---------------GKKIGGAPANFAYHVSQ-FG--FDSRVVSAVGNDELGDEIMEVFK 61 (296)
T ss_dssp CCEEEEESCCEEEEET---T---------------EEEEECHHHHHHHHHHH-TT--CEEEEEEEEESSHHHHHHHHHHH
T ss_pred cceEEEEchhheEecC---C---------------CCCCCCHHHHHHHHHHH-cC--CCeeEEEEeCCChHHHHHHHHHH
Confidence 3589999999999971 1 36799999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQ 158 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~ 158 (323)
++|| +++. .++.+|+++++.++ +|+|++....+. ...+.+. +...+.++++|++|++++.+. .+.+.+.
T Consensus 62 ~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~ 135 (296)
T 2qhp_A 62 EKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFT----DELKRLALNTRAVCFGSLAQRNEVSRATIN 135 (296)
T ss_dssp HTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCC----HHHHHHHHTEEEEEECSGGGSSHHHHHHHH
T ss_pred HcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcc----hhhHhhhcCCCEEEECChHhcChHHHHHHH
Confidence 9999 6664 45678999888776 688776555443 2233221 123456789999999875432 2346777
Q ss_pred HHHHHHHh-CCCeEEEeCCc--hhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc-
Q 020650 159 LVAEHAAA-NNKVFMMNLSA--PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE- 234 (323)
Q Consensus 159 ~~~~~~~~-~~~~~~~d~~~--~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~- 234 (323)
.+++.+++ .+.++++|+.. ..|. .+.++++++++|++++|++|++.+++....+.++++++++.+ ..
T Consensus 136 ~~~~~a~~~~~~~v~~D~~~~~~~~~---~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~ 206 (296)
T 2qhp_A 136 RFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWIL------LAK 206 (296)
T ss_dssp HHHHHSCCTTSCEEEEECCCCTTCCC---HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHH------HHH
T ss_pred HHHHHHHhcCCCEEEEECcCCccccC---HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHH------HHh
Confidence 88888876 68888888843 2231 345677888999999999999999987655556788888888 44
Q ss_pred CCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 235 IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
.+++.+++|+|++|++++++++.++++++++ +++||+||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+
T Consensus 207 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~ 283 (296)
T 2qhp_A 207 YNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGA 283 (296)
T ss_dssp TTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSSSS
T ss_pred cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 3889999999999999998888888876543 7899999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 020650 315 TYPEK 319 (323)
Q Consensus 315 ~~p~~ 319 (323)
..+.+
T Consensus 284 ~~~~~ 288 (296)
T 2qhp_A 284 MPELP 288 (296)
T ss_dssp SCCCC
T ss_pred CCCCc
Confidence 75543
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=307.79 Aligned_cols=285 Identities=18% Similarity=0.214 Sum_probs=228.2
Q ss_pred ceEEEeCCceeeeEeec----------ChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCch
Q 020650 5 GILLGMGNPLLDISSVV----------DDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKF 74 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~----------~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~ 74 (323)
|+|+|+|++++|++..+ ++ .|..++..........+||++.|+|.++++ +| .++.++|.+|+| +
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D-~ 84 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEH--LHKVSLSFLVDDLVMHRGGVAGNMAFAIGV-LG--GEVALVGAAGAD-F 84 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSC--GGGCCCCCCCSEEEEEEECHHHHHHHHHHH-TT--CEEEEECEECGG-G
T ss_pred CeEEEECChhheEEEecChHHhhhhchhh--ccccccccccccceecCCChHHHHHHHHHH-cC--CCeEEEEEEeCc-h
Confidence 58999999999999987 55 555555555567788999999999999998 56 999999999999 8
Q ss_pred hHHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEecccccc
Q 020650 75 GEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV 152 (323)
Q Consensus 75 g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~ 152 (323)
|+ +++.|++.||+++++. .++.+|+.+++.++ +|++.+..+.++...++++++.. ....+++++++|+++.
T Consensus 85 g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~~~~~---- 157 (334)
T 2pkf_A 85 AD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD--VVSAIGKPELVIIGAN---- 157 (334)
T ss_dssp HH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSEEEEESC----
T ss_pred HH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCEEEEcCC----
Confidence 99 9999999999999985 45678999988886 57777656666655555554432 1123578999999874
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCchh--HHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 153 SPDSIQLVAEHAAANNKVFMMNLSAPF--ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
.++.+.++++.+++.+.++++|+.... | ..+.++++++++|++++|++|++.+++.... +.++ +
T Consensus 158 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~---~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~---~~~~----l---- 223 (334)
T 2pkf_A 158 DPEAMFLHTEECRKLGLAFAADPSQQLARL---SGEEIRRLVNGAAYLFTNDYEWDLLLSKTGW---SEAD----V---- 223 (334)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECGGGGGTS---CHHHHHTTTTTCSEEEEEHHHHHHHHHHHCC---CHHH----H----
T ss_pred ChHHHHHHHHHHHhcCCeEEEeccchhhhh---hHHHHHHHHhcCCEEecCHHHHHHHhccCCC---CHHH----H----
Confidence 357788889999999999999986421 2 2345778999999999999999999875432 3332 3
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCe-eeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~-~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
.+. .+.+++|+|++|++++++++ .+++|+++++ .++||+||||+|.|||+++|++|+++++|+++|+++|++++
T Consensus 224 --~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 298 (334)
T 2pkf_A 224 --MAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVL 298 (334)
T ss_dssp --HTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred --Hhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 222 67899999999999987776 7787765431 37899999999999999999999999999999999999999
Q ss_pred hhcCcc--CCCCCC
Q 020650 310 QRSGCT--YPEKPE 321 (323)
Q Consensus 310 ~~~G~~--~p~~~~ 321 (323)
++.|+. .|+.+|
T Consensus 299 ~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 299 ESTGTQEWQWDYEA 312 (334)
T ss_dssp TSSSSSCCCCCHHH
T ss_pred hCCCCCcCCCCHHH
Confidence 999985 465543
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=300.93 Aligned_cols=277 Identities=21% Similarity=0.277 Sum_probs=218.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCC-cEEEEeeeecCchhHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~-~v~~~~~vG~D~~g~~i~ 79 (323)
|+ |+|+|+|++++|++..+.. +....+||++.|+|.++++ +| . ++.++|.+|+| +|+.++
T Consensus 1 M~--~~ilviG~~~iD~~~~~~~-------------~~~~~~GG~~~NvA~~la~-LG--~~~~~~ig~vG~D-~g~~~~ 61 (313)
T 3kd6_A 1 MS--LSLLVIGSLAFDDIETPFG-------------RSDNTLGGSSTYIALSASY-FT--DEPIRMVGVVGSD-FGKEHF 61 (313)
T ss_dssp ----CCEEEESCCEEEEEECSSC-------------EEEEEEECHHHHHHHHHTT-TC--SSCEEEEEEEETT-SCHHHH
T ss_pred CC--ccEEEEeEEEEeeecCCCC-------------cccccCCCHHHHHHHHHHH-hC--CCceEEEEecCCC-cHHHHH
Confidence 55 4799999999999965422 3578999999999999997 55 9 99999999999 999999
Q ss_pred HHHHHcCceeEEee-cCCCCceeEEEEE--e-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHH
Q 020650 80 KNSKLAGVNVHYYE-DESASTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPD 155 (323)
Q Consensus 80 ~~l~~~gi~~~~~~-~~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~ 155 (323)
+.|+++||+++++. .++.+|....-.+ + ++++.+....+....+.+. ..+.++++|++++++ ++++
T Consensus 62 ~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~----~~~~ 131 (313)
T 3kd6_A 62 DLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH------VPQYYRDSKFVCLGN----IDPE 131 (313)
T ss_dssp HHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC------CCGGGTTCSEEEECS----SCHH
T ss_pred HHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc------chHHHccCCEEEEcC----CCHH
Confidence 99999999999986 4556664322111 1 2344444333433334332 224578999999975 3566
Q ss_pred HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 156 SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
....+++.+ +.+.++++|+. ..|.....+.++++++.+|++++|++|++.+++ .++++++++.+ .+.
T Consensus 132 ~~~~~~~~~-~~~~~v~~Dp~-~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~~~ 198 (313)
T 3kd6_A 132 LQLKVLDQI-DDPKLVVCDTM-NFWIEGKPEELKKVLARVDVFIVNDSEARLLSG-----DPNLVKTARII------REM 198 (313)
T ss_dssp HHHHHHTTC-SSCSEEEEECC-HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHS-----CSCHHHHHHHH------HTT
T ss_pred HHHHHHHHH-hhCCEEEEcCh-hhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhC-----CCCHHHHHHHH------HHc
Confidence 667777776 56788999994 455555566788899999999999999999987 35788999998 667
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC-----CHHHHHHHHhHHHHHHhh
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-----PIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~-----~~~~a~~~A~~~Aa~~~~ 310 (323)
|++.++||+|++|++++++++.+++|++++ .+++||+||||+|.|||+++|.+|+ ++++|+++|+++|+++|+
T Consensus 199 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a~~~aa~~v~ 276 (313)
T 3kd6_A 199 GPKTLIIKKGEHGALLFTDNGIFAAPAFPL--ESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYGSAMASFCVE 276 (313)
T ss_dssp SCSEEEEECTTSCEEEEETTEEEEECCCTT--CCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeeCCCcEEEEECCceEEeCCCCC--CCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHe
Confidence 899999999999999999888888886543 2689999999999999999999998 899999999999999999
Q ss_pred hcCcc---CCCCCC
Q 020650 311 RSGCT---YPEKPE 321 (323)
Q Consensus 311 ~~G~~---~p~~~~ 321 (323)
+.|+. .|+++|
T Consensus 277 ~~G~~~~~~~~~~e 290 (313)
T 3kd6_A 277 QFGPYRYNDLDLLE 290 (313)
T ss_dssp SSTTGGGGTCCHHH
T ss_pred ecCCCCCCCCCHHH
Confidence 99995 366554
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=304.39 Aligned_cols=284 Identities=17% Similarity=0.198 Sum_probs=229.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
.++|.|++++|++..+++ + .+++..+..+....+||++.|+|.++++ +| .++.++|.+|+ .+|+.+++.|++.
T Consensus 2 i~tvt~n~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~~~~vG~-~~g~~i~~~l~~~ 74 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTND--F-KIDGLNRATATYKFAGGKGINVSRVLKT-LD--VESTALGFAGG-FPGKFIIDTLNNS 74 (306)
T ss_dssp EEEEESSCEEEEEEECSS--C-CTTSEEECSEEEEEEESHHHHHHHHHHH-TT--CCCEEEEEECH-HHHHHHHHHHHHT
T ss_pred EEEEecCceEEEEEEcCC--c-ccCceEEeceeEecCCchHHHHHHHHHH-cC--CCeeEEEEecC-cchHHHHHHHHHC
Confidence 688999999999999997 3 5678888888899999999999999998 56 99999999999 6999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhh---hccccEEEEecccc-ccCHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL---VEKAKYFYIAGFFL-TVSPDSIQLVA 161 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~i~~~~~-~~~~~~~~~~~ 161 (323)
||+++++...+ .|++++.+ .+|++..+...++ .+++++++. ..+. ++++|++|++|+.+ ..+.+.+..++
T Consensus 75 gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 148 (306)
T 2jg5_A 75 AIQSNFIEVDE-DTRINVKL-KTGQETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIA 148 (306)
T ss_dssp TCEECCEECSS-CCEEEEEE-ESSSEEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHH
T ss_pred CCceeEEEcCC-CCeEEEEE-cCCCEEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEEEeCCCCCCCChHHHHHHH
Confidence 99999987543 47777665 6777755544442 344444321 1111 56799999988653 23457888999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
+.+++++.++++|+.... +.++++ .+|++++|++|++.+++....+.+++.++++.+ .+.+.+.+
T Consensus 149 ~~a~~~g~~v~~D~~~~~--------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~v 214 (306)
T 2jg5_A 149 QITAQTGAKLVVDAEKEL--------AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLL------VDKGAQSV 214 (306)
T ss_dssp HHHHHHCCEEEEECCHHH--------HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHH------HHTTCSCE
T ss_pred HHHHHCCCEEEEECChHH--------HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEE
Confidence 999999999999997432 455666 699999999999999875332223566777777 56688999
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCC
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 320 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~ 320 (323)
++|+|++|++++++++.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.| +|+.+
T Consensus 215 vvt~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G--~~~~~ 289 (306)
T 2jg5_A 215 IVSLGGDGAIYIDKEISIKAVNPQ---GKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDED--LATRD 289 (306)
T ss_dssp EEECGGGCEEEECSSEEEEEECCC---CCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS--SCCHH
T ss_pred EEccCCCceEEEeCCcEEEEeCCc---ccccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC--CCCHH
Confidence 999999999998888778887654 4789999999999999999999999999999999999999999999 77765
Q ss_pred C
Q 020650 321 E 321 (323)
Q Consensus 321 ~ 321 (323)
|
T Consensus 290 e 290 (306)
T 2jg5_A 290 A 290 (306)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=303.58 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=230.1
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|+|+++|+.+.++..... ....+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 13 ~~~~~~ge~l~~~~~~~~-------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~i~~~L~~ 82 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDH-------KRIFQTDSFDVTYGGAEANVAAFLAQ-MG--LDAYFVTKLPNNPLGDAAAGHLRK 82 (351)
T ss_dssp CEEEEESCCEEEEECSTT-------CCGGGCSEEEEEEECHHHHHHHHHHH-TT--SEEEEEEEECSSHHHHHHHHHHHH
T ss_pred ceEEEechhhheecCCCC-------ccccccceeeEecCChHHHHHHHHHH-cC--CCeEEEEEeCCCHHHHHHHHHHHH
Confidence 689999999988654221 12344567788999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCcc-ceeeccc---ccccCCcccCCCcchhhhhccccEEEEeccccccCH---HHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGER-SLVANLS---AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP---DSI 157 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~---~~~ 157 (323)
.||+++++...+.+|+.+++..++++| +++.+.. +...++++++. ....+++++++|++++.+.+++ +.+
T Consensus 83 ~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~---~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 159 (351)
T 2afb_A 83 FGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFD---WEKILDGARWFHFSGITPPLGKELPLIL 159 (351)
T ss_dssp TTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCC---HHHHTTTEEEEEEETTSGGGSTTHHHHH
T ss_pred cCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCC---HHHhhcCCCEEEEeCcccccChhHHHHH
Confidence 999999986556688888776655555 3444332 22345555553 2234689999999987654443 778
Q ss_pred HHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC---------CCCCHHHHHHH
Q 020650 158 QLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW---------ETDDVEEIALK 225 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~---------~~~~~~~~~~~ 225 (323)
.++++.+++.+.++++|+.. ..|. ....+.+..+++++|++++|++|++.+++.... +.++++++++.
T Consensus 160 ~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T 2afb_A 160 EDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEE 239 (351)
T ss_dssp HHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHH
Confidence 88999999999999999863 2332 124456788999999999999999999875321 12235667777
Q ss_pred HhcCCccccC-CccEEEEeeCCCce--------EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHH
Q 020650 226 LSQWPKASEI-RKRTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 296 (323)
Q Consensus 226 l~~~~~~~~~-~~~~vvit~G~~G~--------~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~ 296 (323)
+ ... +++.+++|+|++|+ +++++++.++++++++ +++|||||||+|.|+|+++|++|+++++
T Consensus 240 l------~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~l~~ 310 (351)
T 2afb_A 240 V------TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGDSFAGALIYGSLMGFDSQK 310 (351)
T ss_dssp H------HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHHHHHHHHHHHHHHHTCCHHH
T ss_pred H------HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 7 443 88999999999975 6777777778877655 7899999999999999999999999999
Q ss_pred HHHHHhHHHHHHhhhcCc-cCCCCCC
Q 020650 297 CVRAGCYTSHVIIQRSGC-TYPEKPE 321 (323)
Q Consensus 297 a~~~A~~~Aa~~~~~~G~-~~p~~~~ 321 (323)
|+++|+++|++++++.|+ .+|++++
T Consensus 311 a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 311 KAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp HHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999998 4666544
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=303.24 Aligned_cols=268 Identities=21% Similarity=0.256 Sum_probs=218.9
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++..+++ +| ++...........+||++.|+|.+|++ +| .++.++|.+|+| +|+.+++.|+
T Consensus 20 ~~~v~viG~~~iD~~~~~~~--~p-~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D-~G~~i~~~L~ 92 (306)
T 3bf5_A 20 MRFLAYFGHLNIDVLISVDS--IP-REGSVNVKDLRPRFGGTAGNFAIVAQK-FR--IPFDLYSAVGMK-THREYLAMIE 92 (306)
T ss_dssp CEEEEEECCCEEEEEEECSC--CC-SSEEEECSEEEEEEEHHHHHHHHHHHH-TT--CCCEEEEEEETT-TCHHHHHHHH
T ss_pred CCcEEEECCceEEEEEecCC--CC-CCceEECcceEecCCChHHHHHHHHHH-cC--CCeEEEEEEeCC-hHHHHHHHHH
Confidence 46899999999999999888 66 566666777888999999999999998 56 999999999999 9999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+.||+++++. .++.+|+.++++++.|+|+++.+.++...++ +++. ++++++|+++.. .+.++++
T Consensus 93 ~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~ga~~~~~-~~l~--------~~~~~v~~~~~~------~~~~~~~ 157 (306)
T 3bf5_A 93 SMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGAMAAWA-PQLA--------DEYEYVHFSTGP------NYLDMAK 157 (306)
T ss_dssp HTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECTHHHHCC-CCCC--------SCEEEEEECSSS------SHHHHHH
T ss_pred HcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCChhhhhh-Hhhc--------CCCCEEEECChH------HHHHHHH
Confidence 9999999984 5677899999888668888777777665565 3331 689999998743 5566777
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.+++ ++++|+....|. ...+.++.+++++|++++|++|++.+++....+.. .+ . +++
T Consensus 158 ~a~~---~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-------~l------~------vvv 214 (306)
T 3bf5_A 158 SIRS---KIIFDPSQEIHK-YSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-------KV------T------TIV 214 (306)
T ss_dssp HCCS---EEEECCGGGGGG-SCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC-------SS------C------EEE
T ss_pred HhCC---cEEEcCchhhhh-ccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc-------cE------E------EEE
Confidence 6654 888999754331 12345677889999999999999999875432110 12 1 999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh--cCcc--CCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR--SGCT--YPE 318 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~--~G~~--~p~ 318 (323)
|+|++|++++++++.+++|+++ ++ +|||||||+|.|||+++|++|+++++|+++|+++|++++++ .|+. +|+
T Consensus 215 T~G~~Ga~~~~~~~~~~~~~~~---v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~~~G~~~~~p~ 290 (306)
T 3bf5_A 215 TNGERGSSLFMDGKKYDFPAIP---SS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVIDDGIENFSLNMED 290 (306)
T ss_dssp EEGGGEEEEEETTEEEEEECCC---CC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCSTTCCCCHHH
T ss_pred eecccCeEEEeCCcEEEecCCc---CC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCccccccCCC
Confidence 9999999999888888887654 37 99999999999999999999999999999999999999999 9983 455
Q ss_pred CC
Q 020650 319 KP 320 (323)
Q Consensus 319 ~~ 320 (323)
++
T Consensus 291 ~~ 292 (306)
T 3bf5_A 291 LE 292 (306)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=277.98 Aligned_cols=271 Identities=16% Similarity=0.123 Sum_probs=211.2
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-|.+.|.+..|.+..... ....+||++.|+|.+|++ +| .++.++|.+|+|. +.+++.|++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~--------------~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~--~~~~~~L~~~ 73 (298)
T 1vk4_A 13 MITFIGHVSKDVNVVDGK--------------REIAYGGGVVMGAITSSL-LG--VKTKVITKCTRED--VSKFSFLRDN 73 (298)
T ss_dssp EEEEECCCEEEEEEETTE--------------EEEEEECHHHHHHHHHHH-TT--CEEEEEEEECTTT--GGGGTTTGGG
T ss_pred eEEEeccccCceEeecCe--------------EEEecCCHHHHHHHHHHH-cC--CceEEEEEEcCCH--HHHHHHHHHc
Confidence 478889999999887765 678999999999999998 56 9999999999997 7788999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 165 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~ 165 (323)
||+++++.. +.+|+.+.++..+|+++++.+.++...++++++.. ..+++++++++.+ .+...++++.++
T Consensus 74 gVd~~~v~~-~~~t~~~~i~~~~g~~~~~~~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~ 142 (298)
T 1vk4_A 74 GVEVVFLKS-PRTTSIENRYGSDPDTRESFLISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLR 142 (298)
T ss_dssp TCEEEEEEC-SSCEEEEEEC-----CCEEEEEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHH
T ss_pred CCceEEEec-CCCcEEEEEEcCCCCeeEEEeccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHH
Confidence 999999865 34566655543367887776666665666555431 5789999987632 223345667777
Q ss_pred hCCCeEEEeCCchh---HH----HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 166 ANNKVFMMNLSAPF---IC----EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 166 ~~~~~~~~d~~~~~---~~----~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
+.+.++++|+.+.. |. ....+.++++++.+|++++|++|++.+++. ++++++++.+ .+.|++
T Consensus 143 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g~~ 211 (298)
T 1vk4_A 143 RKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGT-----NDLRESCRII------RSFGAK 211 (298)
T ss_dssp HHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSC-----SCHHHHHHHH------HHTTCS
T ss_pred HcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhcCCC
Confidence 88999999986311 00 001123567899999999999999999873 4788888888 667889
Q ss_pred EEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhc-CCCHHHHHHHHhHHHHHHhhhcCcc-C
Q 020650 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQRSGCT-Y 316 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~-g~~~~~a~~~A~~~Aa~~~~~~G~~-~ 316 (323)
.+++|+ ++|++++++ +.+++|++ +++++|||||||+|.|||+++|++ |+++++|+++|+++|++++++.|+. .
T Consensus 212 ~vvvT~-~~G~~~~~~-~~~~~~~~---~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~ 286 (298)
T 1vk4_A 212 IILATH-ASGVIVFDG-NFYEASFR---SWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRR 286 (298)
T ss_dssp SEEEEE-TTEEEEESS-SEEEEECC---CSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCG
T ss_pred EEEEEc-CCCcEEEeC-CEEEeccC---CcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCC
Confidence 999999 999999877 66777754 447999999999999999999999 9999999999999999999999995 3
Q ss_pred CCCCCC
Q 020650 317 PEKPEF 322 (323)
Q Consensus 317 p~~~~~ 322 (323)
|+.+|+
T Consensus 287 ~~~~el 292 (298)
T 1vk4_A 287 EDLEAI 292 (298)
T ss_dssp GGGGGC
T ss_pred CCHHHH
Confidence 565554
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-25 Score=194.34 Aligned_cols=220 Identities=17% Similarity=0.199 Sum_probs=151.5
Q ss_pred cEEEEeeeecCchhHHHHHHHHHcCceeEEeecC--CCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhh---
Q 020650 62 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--SASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL--- 136 (323)
Q Consensus 62 ~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 136 (323)
.+.++|.+|+|. |+.+ |+++||+++++... ..+|+..+ ..+ ..++++++.. ..+.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~--~~~~~~~ 71 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQE--LYEGLRL 71 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHH--HHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHH--HHHHHHh
Confidence 477889999998 9888 99999999997531 11232211 111 2344444432 1111
Q ss_pred --hccccEEEEeccccc-cCHHHHHHHHHHHHhCCC--eEEEeCCch--------hH-HHHHHHHHHh-hcCCCcEEEeC
Q 020650 137 --VEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNK--VFMMNLSAP--------FI-CEFFKDALEK-VLPYMDYIFGN 201 (323)
Q Consensus 137 --~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~d~~~~--------~~-~~~~~~~~~~-~l~~~dvl~~n 201 (323)
+.++++++++ +... ...+.+.++++.+++++. ++++||... .| .+...+.++. +++++|++++|
T Consensus 72 ~~~~~~~~v~~G-~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN 150 (312)
T 2yxt_A 72 NNMNKYDYVLTG-YTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPN 150 (312)
T ss_dssp TTCCCCSEEEEC-CCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCC
T ss_pred cCCccCCEEEEC-CCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCC
Confidence 5678998764 3221 012455578888888775 478896421 12 1123444654 89999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc------eEEe-------eC-C----eeeEEece
Q 020650 202 ETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP------VVVA-------QD-G----KLKKFPVI 263 (323)
Q Consensus 202 ~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G------~~~~-------~~-~----~~~~~~~~ 263 (323)
++|++.+++....+.++++++++.+ .+.|++.++||.|+.| ++++ ++ + +.++++++
T Consensus 151 ~~Ea~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (312)
T 2yxt_A 151 QFEAELLSGRKIHSQEEALRVMDML------HSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIR 224 (312)
T ss_dssp HHHHHHHHSCCCCSHHHHHHHHHHH------HHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeec
Confidence 9999999875433334677788888 5678999999988764 6665 44 2 56677765
Q ss_pred eCCCCcccCCCCcchHHHHHHHHHhhc-CCCHHHHHHHHhHHHHHHhhhc
Q 020650 264 VLPKDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 264 ~~~~~~~~d~tGAGDaf~ag~~~~l~~-g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++ ++ ||+||||+|.|+|+++|++ |+++++|+++|+++|+.++++.
T Consensus 225 ~v---~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~ 270 (312)
T 2yxt_A 225 KV---DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRT 270 (312)
T ss_dssp CC---SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cc---CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 44 55 9999999999999999999 9999999999999998888543
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=184.88 Aligned_cols=226 Identities=14% Similarity=0.117 Sum_probs=156.3
Q ss_pred CcEEE-EeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCc-c-hhh-
Q 020650 61 GATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKP-E-NWA- 135 (323)
Q Consensus 61 ~~v~~-~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~- 135 (323)
..... +|.+|.| .....|++.||++.++.. . +..+ .+.+.+ .+ ..++++++... + ..+
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhc
Confidence 55444 7888877 346789999999998742 1 1222 333331 11 23344443220 0 111
Q ss_pred -hhccccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCch-----hHH-HHHHHHH-HhhcCCCcEEEeCHHHH
Q 020650 136 -LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAP-----FIC-EFFKDAL-EKVLPYMDYIFGNETEA 205 (323)
Q Consensus 136 -~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~-----~~~-~~~~~~~-~~~l~~~dvl~~n~~e~ 205 (323)
.++++++++++........+.+.++++.+++ .+.++++|+... .|. +...+.+ +.+++++|++++|.+|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 2457899998654332234667788888887 688999997421 121 1112223 46889999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC-------ceEEeeCCeeeEEeceeCCCCcccCCCCcch
Q 020650 206 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-------PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 278 (323)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~-------G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGD 278 (323)
+.|++....+.+++.++++.+ .+.+.+.+++|.|++ |++++++++.++++++++ . +|++||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999885433334577788888 667899999999999 888888887777776543 3 79999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 279 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 279 af~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
+|.|+|+++|++|+++++|+++|+++++.++++..
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998763
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.5e-23 Score=177.25 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=122.2
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCch------hHHHHHHHHHHh-hcCCCcEEEeCHHHHHHHHhh
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSAP------FICEFFKDALEK-VLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~------~~~~~~~~~~~~-~l~~~dvl~~n~~e~~~l~~~ 211 (323)
.|+++++. ..+.+.+..+++.+++.+.+ +++|+... .|.+...+.+.. +++.+|++++|..|++.|++.
T Consensus 95 ~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 95 IDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp CSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 68887753 12568889999999999986 99997542 222222233543 789999999999999999875
Q ss_pred -cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-----eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 212 -QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 212 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-----~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
...+.++++++++.+ .+.+.+.+++|.|++| ++++++++.+++++++ ++++||+||||+|.|+|+
T Consensus 172 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~---~~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 172 PHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPR---VNTKNTHGTGCTLSAALA 242 (288)
T ss_dssp CCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---C---CCCSCCBTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccc---cCCCCCCCchHHHHHHHH
Confidence 333334567778888 5678899999999999 8888777777766543 478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++|++|+++++|+++|+++++.++++.
T Consensus 243 a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 243 ALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999766
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.6e-21 Score=161.80 Aligned_cols=162 Identities=17% Similarity=0.195 Sum_probs=125.2
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCch------hHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAP------FICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~------~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.++++. + .+.+.+..+++.+++.+ .++++|+... .|.+...+.+ +.+++++|++++|..|++.|++
T Consensus 70 ~~~~v~~G~--l-~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGA--L-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC--C-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECC--c-CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 357777653 1 25677888889999888 7899998431 2222222334 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC-c----eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-P----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~-G----~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
....+.++++++++.+ .+.+++.+++|.|++ | ++++++++.+++++++ .+++||+||||+|.|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l------~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~---~~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPR---VHTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECC---CCCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccc---cCCCCCCChHHHHHHHHH
Confidence 5433334567778888 557888999999998 8 7788877777777543 478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++|.+|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=155.33 Aligned_cols=162 Identities=20% Similarity=0.175 Sum_probs=126.6
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCch------hHHHHHHHHHH-hhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAP------FICEFFKDALE-KVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~------~~~~~~~~~~~-~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..|.++++.. .+.+.+..+++.+++.+. ++++|+... .+.+...+.+. ++++.+|++++|..|++.|++
T Consensus 74 ~~d~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGML---PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCC---CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5688888542 236788888999998888 599997421 11222334454 788999999999999999988
Q ss_pred hc-CCCCCCHHHHHHHHhcCCccccCCccEEEEeeCC--Cce----EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 VQ-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGA--DPV----VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~--~G~----~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
.. ..+.++.+++++.+ .+.+.+.+++|.|. +|+ +++++++.+++++++ .+++|++||||+|.|+
T Consensus 151 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKI------HALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEM---IDTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHH------HTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECC---CCCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH------HHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccc---cCCCCCCChHHHHHHH
Confidence 54 33333567778888 56788999999999 784 667666777777543 3789999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+++|++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=156.10 Aligned_cols=167 Identities=11% Similarity=0.122 Sum_probs=125.0
Q ss_pred ccccEEEEeccccc-cCHHHHHHHHHHHHhCC--CeEEEeCC------chhHHHHHHHHHH-hhcCCCcEEEeCHHHHHH
Q 020650 138 EKAKYFYIAGFFLT-VSPDSIQLVAEHAAANN--KVFMMNLS------APFICEFFKDALE-KVLPYMDYIFGNETEART 207 (323)
Q Consensus 138 ~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~d~~------~~~~~~~~~~~~~-~~l~~~dvl~~n~~e~~~ 207 (323)
.+.|++. .|+... ...+.+.++++.+++.+ .++++||- ...|.+...+.++ .+++.+|++++|..|++.
T Consensus 76 ~~~d~v~-~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 154 (289)
T 3pzs_A 76 KDCDAVL-SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQ 154 (289)
T ss_dssp GGCCEEE-ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCCEEE-ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHH
Confidence 5788865 454321 22356777777777665 77899961 2234444555565 478999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeC-CCce-------EEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 208 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQG-ADPV-------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 208 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G-~~G~-------~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
|++....+.+++.++++.+ .+.|.+.+++|.| .+|+ +++++++.++++.+.++ ..++|++||||+
T Consensus 155 L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dt~GaGD~ 227 (289)
T 3pzs_A 155 LSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVD-FGKRQPVGVGDL 227 (289)
T ss_dssp HHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCC-CTTSCCTTHHHH
T ss_pred HhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeec-CCCCCCCcHHHH
Confidence 9986544445677888888 6678999999975 4776 67777777777654442 123899999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|.|+|+++|.+|+++++|+++|+++++.++++.
T Consensus 228 f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 228 TSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988877653
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.1e-19 Score=150.94 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=128.0
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCc----hhH---HHHHHHHHHhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSA----PFI---CEFFKDALEKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~----~~~---~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..|.+.++- . .+++.+..+.+.+++. +.++++||.. ..| .++..+.++++++.+|++++|..|++.|++
T Consensus 74 ~~daik~G~-l--~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGY-V--GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECC-C--CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECC-C--CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 578888742 1 2567777777777775 5788999832 112 344556677899999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCcccc-CCc-cEEEEeeCC----CceEEee-CCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASE-IRK-RTAVITQGA----DPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~vvit~G~----~G~~~~~-~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
....+.++++++++.+ .+ .|+ +.+++|.|. .|+++++ +++.++++.+++ .+|++|+||+|.|+
T Consensus 151 ~~~~~~~~~~~aa~~L------~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v----~~dt~GaGD~fsaa 220 (282)
T 3h74_A 151 APYQVTPDLEVILPAL------QAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL----PGHYNGTGDTLAAV 220 (282)
T ss_dssp CCCCSSCCHHHHHHHH------HTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC----SSCCTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC----CCCCcCHHHHHHHH
Confidence 7655557899999998 56 788 999999984 7888875 666777775433 38999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+++|.+|+++++|+++|+++++.++++.
T Consensus 221 i~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 221 IAGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998764
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.1e-18 Score=147.26 Aligned_cols=161 Identities=14% Similarity=0.103 Sum_probs=119.4
Q ss_pred cccEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCch----hH---HHHHHHHHHhhcCCCcEEEeCHHHHHHH
Q 020650 139 KAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAP----FI---CEFFKDALEKVLPYMDYIFGNETEARTF 208 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~----~~---~~~~~~~~~~~l~~~dvl~~n~~e~~~l 208 (323)
..|.+.++ +. -+++ .+.++++.+++.+.++++||... .| .++..+.++++++.+|++++|..|++.|
T Consensus 77 ~~~aik~G-~l--~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L 153 (291)
T 3mbh_A 77 QFDAIYTG-YL--GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYL 153 (291)
T ss_dssp CCSEEEEC-CC--SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHH
T ss_pred ccCEEEEC-CC--CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHH
Confidence 56788874 22 1344 44455555544568899999432 12 2445556778999999999999999999
Q ss_pred HhhcCC---CCCCHHHHHHHHhcCCccccCCccEEEEeeCC-------CceEEeeC--CeeeEEeceeCCCCcccCCCCc
Q 020650 209 SKVQGW---ETDDVEEIALKLSQWPKASEIRKRTAVITQGA-------DPVVVAQD--GKLKKFPVIVLPKDKLVDTNGA 276 (323)
Q Consensus 209 ~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~-------~G~~~~~~--~~~~~~~~~~~~~~~~~d~tGA 276 (323)
++.... +.++++++++.+ .+.|++.+++|.|. .|++++++ ++.++++.++ +. +|++|+
T Consensus 154 ~g~~~~~~~~~~~~~~aa~~L------~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~---~~-~dt~Ga 223 (291)
T 3mbh_A 154 LDEPYKADSTDEELKEYLRLL------SDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPY---LP-AHYPGT 223 (291)
T ss_dssp HTCCCCSCCCHHHHHHHHHHH------HHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESC---CG-GGSTTH
T ss_pred hCCCCCCCCCHHHHHHHHHHH------HhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecc---cC-CCCCCh
Confidence 985432 234577888888 66789999999653 57777776 3455666532 23 899999
Q ss_pred chHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 277 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 277 GDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
||+|.|+|+++|.+|+++++|+++|+++++.++++.
T Consensus 224 GD~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 224 GDTFTSVITGSLMQGDSLPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888654
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=146.58 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=114.7
Q ss_pred ccccEEEEeccccccCH---HHHHHHHHHHHhCC------CeEEEeCCc----hhH-HHHHHHHHHhhcCCCcEEEeCHH
Q 020650 138 EKAKYFYIAGFFLTVSP---DSIQLVAEHAAANN------KVFMMNLSA----PFI-CEFFKDALEKVLPYMDYIFGNET 203 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~d~~~----~~~-~~~~~~~~~~~l~~~dvl~~n~~ 203 (323)
..+|+|.+ |+.. +. +.+.++++..++.+ .++++||-. ..| .+...+.++++++.+|++.+|..
T Consensus 75 ~~~daV~t-G~l~--s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILT-GYIN--NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEE-CCCC--CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEE-CCCC--CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHH
Confidence 46788666 5432 33 44555666665544 678899821 122 22345556779999999999999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-------eEEeeC------CeeeEEeceeCCCCcc
Q 020650 204 EARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-------VVVAQD------GKLKKFPVIVLPKDKL 270 (323)
Q Consensus 204 e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-------~~~~~~------~~~~~~~~~~~~~~~~ 270 (323)
|++.|++....+.++++++++.| .+.|++.++||.|..| +++... ++.++++.+.+ ..
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~ 222 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG 222 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS
T ss_pred HHHHHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC
Confidence 99999986544445677888888 6678999999999988 233334 45666665444 33
Q ss_pred cCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 271 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 271 ~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|++|+||+|.|+|+++| +|+++++|+++|+++...++++-
T Consensus 223 -~~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 223 -RYTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp -CBTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHT
T ss_pred -CCcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999 99999999999999977766543
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=130.89 Aligned_cols=160 Identities=14% Similarity=0.068 Sum_probs=107.4
Q ss_pred hhhhhccccEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 209 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~ 209 (323)
..+.+..++.+++..-.+. ...+.+..+++.+++.+.++++|+..........+..+++++ ..|++.+|..|+..|+
T Consensus 52 ~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~ 131 (272)
T 1ekq_A 52 VADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTV 131 (272)
T ss_dssp HHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHC
T ss_pred HHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHh
Confidence 3455677898888432211 112556777788888999999999643111111223345565 8999999999999998
Q ss_pred hhc-C--------CCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHH
Q 020650 210 KVQ-G--------WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 280 (323)
Q Consensus 210 ~~~-~--------~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf 280 (323)
+.. . .+.++..++++.+ .......+++| |..+ ++.++++.++++.. ...+.|++|+||+|
T Consensus 132 g~~~~~~~gvd~~~~~~~~~~aa~~l------~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~---~~~~~~ttGaGD~l 200 (272)
T 1ekq_A 132 GVTDWLIKGVDAGEGGGDIIRLAQQA------AQKLNTVIAIT-GEVD-VIADTSHVYTLHNG---HKLLTKVTGAGCLL 200 (272)
T ss_dssp C---------------HHHHHHHHHH------HHHHTSEEEEC-SSSE-EEECSSCEEEECCC---CGGGGGSTTHHHHH
T ss_pred CCCcccccCccCCCCHHHHHHHHHHH------HHHcCCEEEEE-CCCC-EEEeCCEEEEEcCC---CccccCccCchHHH
Confidence 753 2 1223456677777 33334455555 8887 55566666666643 23667999999999
Q ss_pred HHHHHHHhhcCCCHHHHHHHHhH
Q 020650 281 VGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 281 ~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
.|.+.+.+.+|.++.+|+.+|+.
T Consensus 201 ag~iaa~la~g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 201 TSVVGAFCAVEENPLFAAIAAIS 223 (272)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHH
Confidence 88888888889999999999986
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-14 Score=134.16 Aligned_cols=159 Identities=18% Similarity=0.230 Sum_probs=112.9
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHH---hCCCeEEEeCCc------hhHHHHHHHHHH-hhcCCCcEEEeCHHHHHHH
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAA---ANNKVFMMNLSA------PFICEFFKDALE-KVLPYMDYIFGNETEARTF 208 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~------~~~~~~~~~~~~-~~l~~~dvl~~n~~e~~~l 208 (323)
..|.|.++.. +.+.+..+.+.++ +.+.++++||.. ..+.+...+.+. .+++.+|++.+|..|++.|
T Consensus 91 ~~daIkiG~l----s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML----TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC----CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC----CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6788888632 5655554444444 447889999942 122222334444 7899999999999999999
Q ss_pred Hhhc--CCCCCCHHHHHHHHhcCCccccCCc-cEEEEeeCCCc--------e--EEe--eCCeeeEEeceeCCCCcccCC
Q 020650 209 SKVQ--GWETDDVEEIALKLSQWPKASEIRK-RTAVITQGADP--------V--VVA--QDGKLKKFPVIVLPKDKLVDT 273 (323)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~-~~vvit~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~~~d~ 273 (323)
++.. ..+.+++.++++.+ .+.+. +.|+||.|..+ + +++ ++++.++++.+.+ ..+|+
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L------~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDL------AKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHH------HHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHH------HHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9853 22334677888888 55555 78999998763 3 455 4556666765433 57899
Q ss_pred CCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 274 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 274 tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
+|+||+|.|+++++|.+|.++++|+++|+..-...++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975555543
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.9e-11 Score=101.16 Aligned_cols=162 Identities=15% Similarity=0.081 Sum_probs=107.8
Q ss_pred hhhhhccccEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTF 208 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l 208 (323)
..+.++.+|.+++..-.+ +++ .+..+++.+++.+.++++|+..........+....+++ ..+++.+|..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 456678899999964221 333 45566777888899999999752211111222233332 289999999999999
Q ss_pred HhhcC----CC----C-CCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 209 SKVQG----WE----T-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 209 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
++... .+ . ++..++++.+ .......+++| |..+. ++++++.+.++... ....+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~l------a~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~---~~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNA------AREFNTTVAVT-GAVDY-VSDGRRTFAVYNGH---ELLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHH------HHHTTSEEEEE-SSSEE-EECSSCEEEECCCC---GGGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHH------HHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCC---cCcCCccChhHH
Confidence 88652 11 1 3456677777 33344557777 77764 45666666665422 245699999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHH
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~ 308 (323)
|.|.+.+.|.+|.+ .+|+..|..+-+.+
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTFGIA 224 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHHHHH
Confidence 99999999999999 88888776554433
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.7e-09 Score=92.35 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=93.7
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhh-c-CCCcEEEeCHHHHHHHHh
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKV-L-PYMDYIFGNETEARTFSK 210 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~-l-~~~dvl~~n~~e~~~l~~ 210 (323)
+.++..|.+.++. .+..+++....+.+..+. .+.++++|+......... ..+ + +..+++.+|..|++.|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~----~~l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKR----KPAIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHC----C-CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccC----hhhcCCCCCEEECCcHHHHHHHhC
Confidence 4456788998863 122234333333333333 378999999544321110 012 3 467899999999999987
Q ss_pred hcCCCC-CCH-HHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHH-
Q 020650 211 VQGWET-DDV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ- 287 (323)
Q Consensus 211 ~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~- 287 (323)
....+. ++. .++++.+ .+ + .+|+..| .+.++++++.. ++.. +.....+++|+||++ +|++++
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g--~~VvlkG-~~~~i~~~~~~-~~~~---~~~~~~~t~GtGD~L-ag~iaa~ 260 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-E--TILVAKS-HQTKIYQGQKI-GHIQ---VGGPYQATGGMGDTL-AGMIAGF 260 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-T--CEEEECS-SSCEEEETTEE-EEEC---CCCGGGCSTTHHHHH-HHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-C--CEEEEeC-CCeEEEECCEE-EEEC---CCCCCCCCCcHHHHH-HHHHHHH
Confidence 543222 234 4555555 44 3 2444445 55666664444 3332 233678999999998 555555
Q ss_pred hhc-CCCHHHHHHHHhHHHHHHhh
Q 020650 288 LVQ-EKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 288 l~~-g~~~~~a~~~A~~~Aa~~~~ 310 (323)
|.+ |.++.+|+.+|+.+.+...+
T Consensus 261 lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 261 VAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHH
Confidence 568 99999999999877776443
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.96 E-value=2e-08 Score=84.89 Aligned_cols=161 Identities=15% Similarity=0.090 Sum_probs=105.0
Q ss_pred chhhhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHH
Q 020650 132 ENWALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEART 207 (323)
Q Consensus 132 ~~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~ 207 (323)
+..+..+.++.++++.-. .++ +.+...++.+++.+.++++||..........+..+.++ ...+++.+|..|+..
T Consensus 51 e~~e~~~~a~alvIn~G~--l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGH--LSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCS--CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCC--CChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 355667889999987422 233 34556667788889999999954221111222223332 368999999999999
Q ss_pred HHhhcC----CCC-------C---CHHHHHHHHhcCCccccCCc-cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccC
Q 020650 208 FSKVQG----WET-------D---DVEEIALKLSQWPKASEIRK-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVD 272 (323)
Q Consensus 208 l~~~~~----~~~-------~---~~~~~~~~l~~~~~~~~~~~-~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d 272 (323)
|++... .+. + +..++++.+ .+... ..+++| |..- +++++++.+.++.- ....-+
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~l------a~~~~~~~Vvlk-G~~D-~i~dg~~~~~~~~G---~~~~~~ 197 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQ------TQKFPQTVFLAT-GIQD-VLVSQEQVIVLQNG---VPELDC 197 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHH------HHHSTTCEEEEE-SSSE-EEECSSCEEEECCC---CGGGGS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHH------HHHhCCeEEEEE-CCee-EEEcCCEEEEeCCC---CcccCC
Confidence 988542 121 1 344566676 33334 667777 4333 45566666665432 114456
Q ss_pred CCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHH
Q 020650 273 TNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 305 (323)
Q Consensus 273 ~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~A 305 (323)
++|.||++.|.+.+.+.+|.++.+|+..|...=
T Consensus 198 v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~ 230 (273)
T 3dzv_A 198 FTGTGDLVGALVAALLGEGNAPMTAAVAAVSYF 230 (273)
T ss_dssp STTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999998887653
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=98.95 E-value=3.7e-09 Score=91.41 Aligned_cols=155 Identities=18% Similarity=0.160 Sum_probs=92.9
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhhc--CCCcEEEeCHHHHHHHHh
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKVL--PYMDYIFGNETEARTFSK 210 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~e~~~l~~ 210 (323)
..++..+.+.++. .+..+.+....+.+..+. .+.++++|+....+.... ..++ +..+++.+|..|++.|++
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~----~~~l~~~~~~viTPN~~E~~~L~g 181 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQG----NFSLTYPEKVVFTPHQMEWQRLSH 181 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHT----TCCCSSGGGEEEECCHHHHHHHHC
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccc----hhhhcCCCCEEEcCCHHHHHHHhC
Confidence 4456788998863 122234333333333333 478999999644321110 0223 357899999999999987
Q ss_pred hcCCCCC-CH-HHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHh
Q 020650 211 VQGWETD-DV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 288 (323)
Q Consensus 211 ~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l 288 (323)
....+.+ +. .++++.+ ++ +|+..| .+.++++++..+ +.. +.....+++|+||++.+.+...|
T Consensus 182 ~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~-~~~---~g~~~~~t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 182 LPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPF-QNT---GGNPGMATGGTGDTLAGIIAGFL 245 (310)
T ss_dssp CCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCE-ECC---CCCGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEE-EEC---CCCCCCCCCChHHHHHHHHHHHH
Confidence 5332222 33 5555555 32 444445 556666633343 332 23356789999999755444445
Q ss_pred hcCCCHHHHHHHHhHHHHHHhh
Q 020650 289 VQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 289 ~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
.+|.++.+|+.+|+.+.+....
T Consensus 246 A~g~~~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 246 AQFKPTIETIAGAVYLHSLIGD 267 (310)
T ss_dssp HHSCSSHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHH
Confidence 6999999999999877766443
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=5e-08 Score=89.68 Aligned_cols=159 Identities=14% Similarity=0.090 Sum_probs=100.6
Q ss_pred hhhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 134 WALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 134 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
.+.++.+|.+.++. .+..+.+....+.+.+++.+.++++|+....... .+.+ +..+..+++.+|..|+..|++...
T Consensus 315 ~~~~~~~davviGp-Glg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~~~ 390 (502)
T 3rss_A 315 LELSKDVDVVAIGP-GLGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKKTV 390 (502)
T ss_dssp HHHHTTCSEEEECT-TCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTCCH
T ss_pred HHHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCCCc
Confidence 34567899999974 2222333333333355677899999986432211 1212 223567899999999999987432
Q ss_pred CC-CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC
Q 020650 214 WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292 (323)
Q Consensus 214 ~~-~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~ 292 (323)
.+ .++ .++++.+. +.... +|+..|. +.++++++..+..+ . .....+++|+||+|.+.+.+.|.+|.
T Consensus 391 ~~~~~d-~~aa~~la------~~~~~-~VvlKG~-~~vi~~~~~~~~~~-~---g~~~~at~GsGD~Lag~iaa~lA~g~ 457 (502)
T 3rss_A 391 GDVKYN-YELAEEFA------KENDC-VLVLKSA-TTIVTDGEKTLFNI-T---GNTGLSKGGSGDVLTGMIAGFIAQGL 457 (502)
T ss_dssp HHHTTC-HHHHHHHH------HHHTS-EEEECSS-SEEEECSSCEEEEC-C---CCGGGSSTTHHHHHHHHHHHHHHTTC
T ss_pred cchHHH-HHHHHHHH------HHcCC-EEEEeCC-CeEEEcCCEEEEEC-C---CCCccccCCchHHHHHHHHHHHhCCC
Confidence 11 234 56666663 22222 4555564 44556665444332 1 23567899999999888888888999
Q ss_pred CHHHHHHHHhHHHHHHh
Q 020650 293 PIEECVRAGCYTSHVII 309 (323)
Q Consensus 293 ~~~~a~~~A~~~Aa~~~ 309 (323)
++.+|+.+|+.+-+.+-
T Consensus 458 ~~~~Aa~~A~~~hg~Ag 474 (502)
T 3rss_A 458 SPLEASTVSVYLHGFAA 474 (502)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999987776654
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.4e-07 Score=80.15 Aligned_cols=144 Identities=16% Similarity=0.127 Sum_probs=93.6
Q ss_pred hccccEEEEeccccccCH-HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEEeCHHHHHHHHhhc
Q 020650 137 VEKAKYFYIAGFFLTVSP-DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETEARTFSKVQ 212 (323)
Q Consensus 137 ~~~~~~v~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~e~~~l~~~~ 212 (323)
++..|++.+++ .+.. +...++++.+.+.+.++++|.....+ ..+ ...+++.+|..|++.|++..
T Consensus 96 l~~~davviGP---Glg~~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~ 163 (279)
T 3rpz_A 96 EETYRAIAIGP---GLPQTESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVP 163 (279)
T ss_dssp SSCCSEEEECT---TCCCCHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCC
T ss_pred ccCCCEEEECC---CCCCCHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCC
Confidence 46789999964 3332 34566677776778899999865431 222 35678889999999998743
Q ss_pred CCC-CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC
Q 020650 213 GWE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291 (323)
Q Consensus 213 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g 291 (323)
..+ .++..++++.+. +.....++ -.|. +.++++++..+++... ......++|+||++.+.+...+.+|
T Consensus 164 ~~~~~~d~~~aa~~la------~~~~~~Vv-lKG~-~~vi~~~~g~~~~~~~---g~~~~at~GtGD~Lag~iaa~lA~g 232 (279)
T 3rpz_A 164 VNELQKKRAEYAKEWA------AQLQTVIV-LKGN-QTVIAFPDGDCWLNPT---GNGALAKGGTGDTLTGMILGMLCCH 232 (279)
T ss_dssp HHHHTTSHHHHHHHHH------HHHTSEEE-ECST-TCEEECTTSCEEECCC---CCGGGCSTTHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHH------HHcCeEEE-EeCC-CcEEECCCceEEEeCC---CCCCCCCCChHHHHHHHHHHHHHCC
Confidence 211 246667777773 22223344 4454 4455565543333322 2256789999998766666667799
Q ss_pred CCHHHHHHHHhH
Q 020650 292 KPIEECVRAGCY 303 (323)
Q Consensus 292 ~~~~~a~~~A~~ 303 (323)
.++.+|+..|..
T Consensus 233 ~~~~~A~~~a~~ 244 (279)
T 3rpz_A 233 EDPKHAVLNAVY 244 (279)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999875
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=98.52 E-value=4.2e-06 Score=75.40 Aligned_cols=167 Identities=13% Similarity=0.017 Sum_probs=94.4
Q ss_pred ceeecCchHHHHHHHHHHhcCCCC-cEEEEeeeecCchhHHHHHHHHHcCceeEEe-----------e-c-C-CCCceeE
Q 020650 38 VEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY-----------E-D-E-SASTGTC 102 (323)
Q Consensus 38 ~~~~~GG~~~n~a~~l~~l~g~g~-~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~-----------~-~-~-~~~t~~~ 102 (323)
...+.||.|.-+|..+++ +| . +|.+.++.... ...+.| ..+|-.-.+ + . + +..--..
T Consensus 112 ~~~~~GGnA~imAn~La~-lg--~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~ 183 (474)
T 3drw_A 112 EEERLGGQAGIIANTLAG-LK--IRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINR 183 (474)
T ss_dssp SEEEEESHHHHHHHHHHH-TT--CSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEE
T ss_pred ceEecCChHHHHHHHHHH-cC--CCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEE
Confidence 357899999999999997 45 7 57777776653 334444 233322211 0 0 0 1112222
Q ss_pred EEEEeCCccc---------------eeecccccc-cCC-cccCCCcchhhhh-ccccEEEEeccccccC--------HHH
Q 020650 103 AVCVVGGERS---------------LVANLSAAN-CYK-SEHLKKPENWALV-EKAKYFYIAGFFLTVS--------PDS 156 (323)
Q Consensus 103 ~~~~~~g~~~---------------~~~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~v~i~~~~~~~~--------~~~ 156 (323)
++.+..|++. ++.....+. .+. .+++. +....+ +.+|+++++|+...-. .+.
T Consensus 184 I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~--~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~ 261 (474)
T 3drw_A 184 IFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIK--PFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYY 261 (474)
T ss_dssp EEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTG--GGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHH
T ss_pred EEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHH--HHHHHhhcCCCEEEEeccccccccccccccHHHH
Confidence 3333334332 222211111 111 11111 122333 3699999999985333 122
Q ss_pred ---HHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 157 ---IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
+.+.++..+..++++-+.+.+..-.+.....+..+++.+|.+-+|++|+..+.+..+.
T Consensus 262 l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~ 322 (474)
T 3drw_A 262 LRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGY 322 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhcC
Confidence 2344555567788888888664433334555678999999999999999999886554
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.4e-05 Score=74.16 Aligned_cols=161 Identities=13% Similarity=0.065 Sum_probs=102.9
Q ss_pred hhhhhcc-ccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHH
Q 020650 133 NWALVEK-AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 209 (323)
Q Consensus 133 ~~~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~ 209 (323)
..+..+. ++.++|+.-.+. +.+....+.+.+++.+.++++|+..........+..+.+++ ..+++.+|..|+..|+
T Consensus 299 ~~e~~~~~~~alvin~G~l~-~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~ 377 (540)
T 3nl6_A 299 VNDLAAIPHATLLLNTGSVA-PPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLA 377 (540)
T ss_dssp HHHHTTSTTCEEEEESSCSC-CHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHT
T ss_pred HHHHHhccCCeEEEeCCCCC-HHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHh
Confidence 4455666 899998753322 25677777788889999999999543222223344567776 7899999999999998
Q ss_pred hhc-----CCC------CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeC-------------------CeeeE
Q 020650 210 KVQ-----GWE------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-------------------GKLKK 259 (323)
Q Consensus 210 ~~~-----~~~------~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~-------------------~~~~~ 259 (323)
+.. |.+ .++..++++.+ .......+++| |+.- ++.++ +..+.
T Consensus 378 g~~~~~~~GVds~~~~~~~d~~~aA~~l------A~~~~~vVvlk-G~~D-~I~dg~~~~~~~~~~~~~~~~~~~~~~~~ 449 (540)
T 3nl6_A 378 ELNKERMKGVDASSGISNELLIQATKIV------AFKYKTVAVCT-GEFD-FIADGTIEGKYSLSKGTNGTSVEDIPCVA 449 (540)
T ss_dssp TC--------------CCHHHHHHHHHH------HHHTTSEEEEC-SSSE-EEEECCGGGBCCSSSCCSSCCTTSSCEEE
T ss_pred CCCcccccccccccccCHHHHHHHHHHH------HHHhCCEEEEc-CCCe-EEECCCccccccccccccccccCCccEEE
Confidence 743 222 13445666666 33333556665 5433 34455 34455
Q ss_pred EeceeCCCCcccCCCCcchHHHHHHHHHhhcCC---CHHHHHHHHhHH
Q 020650 260 FPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK---PIEECVRAGCYT 304 (323)
Q Consensus 260 ~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~---~~~~a~~~A~~~ 304 (323)
++.-.. .-.-.++|.||++.+.+.+.+..+. ++.+|+..|..+
T Consensus 450 ~~~G~~--~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 450 VEAGPI--EIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp EECSCC--GGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred ECCCCh--hhccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 443210 1234579999999998888888887 688887776554
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.2e-05 Score=65.73 Aligned_cols=158 Identities=14% Similarity=0.044 Sum_probs=92.3
Q ss_pred hhhhhccccEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTF 208 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l 208 (323)
..+..+.++.++++--+ ++++ ......+.+.+.+.|+++||..-.......+..++++ ...+++.+|..|...|
T Consensus 50 ~~e~~~~a~al~iNiGt--l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L 127 (265)
T 3hpd_A 50 LEEMIRLADAVVINIGT--LDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTT--CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCeEEEECCC--CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHH
Confidence 45666778888886322 3343 3445557778899999999954221111122223332 3689999999999999
Q ss_pred HhhcCC----C-----CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 209 SKVQGW----E-----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 209 ~~~~~~----~-----~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
.+.... + .++..++++.+. ......+++| |+. -++.++++.+.+..-. | ..-..+|.||+
T Consensus 128 ~g~~~~~~gvds~~~~~~d~~~~a~~lA------~~~~~vVvlk-G~~-d~I~dg~~~~~~~~G~-~--~m~~vtGtGc~ 196 (265)
T 3hpd_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAA------REFNTTVAVT-GAV-DYVSDGRRTFAVYNGH-E--LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHH------HHTTSEEEEE-SSS-EEEECSSCEEEECCCC-G--GGGGSTTHHHH
T ss_pred hcccCCCCCccCccccHHHHHHHHHHHH------HHhCCEEEEe-CCC-eEEEcCCEEEEECCCC-h--HhhcCCccchH
Confidence 875422 1 123445666662 2223345555 543 3455666666554321 1 23345899999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
..+-+.+.+..+ ++.+|...|..+
T Consensus 197 Lsg~iaa~lA~~-~~~~Aa~~a~~~ 220 (265)
T 3hpd_A 197 VAALTGAFVAVT-EPLKATTSALVT 220 (265)
T ss_dssp HHHHHHHHHTTS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-ChHHHHHHHHHH
Confidence 877666666666 555666655543
|
| >1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00041 Score=62.64 Aligned_cols=164 Identities=11% Similarity=0.024 Sum_probs=90.9
Q ss_pred ecCchHHHHHHHHHHhcCCCCcEEE--EeeeecCchhHHHHHHHHHcCceeEEee------------c-CCCCceeEEEE
Q 020650 41 IAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYE------------D-ESASTGTCAVC 105 (323)
Q Consensus 41 ~~GG~~~n~a~~l~~l~g~g~~v~~--~~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~-~~~~t~~~~~~ 105 (323)
+.||.+..+|..++. +| .++.+ ++.+|. .+.+.|...+|..-.+. . .+..--..++.
T Consensus 109 ~~GGnA~imAn~la~-lg--~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 109 RMGGQAGIMANLLGG-VY--GVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEESHHHHHHHHHTT-TT--CCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccCCcHHHHHHHHHH-cC--CCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEE
Confidence 899999999888876 44 88877 666664 34455543334331111 0 12222333444
Q ss_pred EeCCccce-eecccccc-----cCCcccCCC-cchhhhhc----cccEEEEeccccccCH---HHHHHHHH---HHHhCC
Q 020650 106 VVGGERSL-VANLSAAN-----CYKSEHLKK-PENWALVE----KAKYFYIAGFFLTVSP---DSIQLVAE---HAAANN 168 (323)
Q Consensus 106 ~~~g~~~~-~~~~~~~~-----~~~~~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~~---~~~~~~~~---~~~~~~ 168 (323)
++.|++.. +..+.+++ ......+.. +++.+.+. .+|+++++|++..-.. +.....++ .....+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 45665421 11111111 111112211 22333444 4999999999842221 33333322 334566
Q ss_pred CeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 169 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 169 ~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
.++-+++.+..-.+.....+ .+++++|.+-+|++|+..+....+
T Consensus 261 ~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~lg 304 (455)
T 1ua4_A 261 IPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEILG 304 (455)
T ss_dssp CCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTT
T ss_pred ceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHhC
Confidence 78888886644333335555 899999999999999998877644
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0007 Score=60.98 Aligned_cols=75 Identities=12% Similarity=0.010 Sum_probs=50.8
Q ss_pred ccccEEEEeccccccC---HH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 138 EKAKYFYIAGFFLTVS---PD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
..+|+++++|++..-. ++ ...+.++..+..++++-+.+.+..-.+.....+ .+++++|.+-+|++|+..+...
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 4499999999985333 22 122333344567788888886644333345556 8999999999999999886544
Q ss_pred cC
Q 020650 212 QG 213 (323)
Q Consensus 212 ~~ 213 (323)
.+
T Consensus 306 lg 307 (457)
T 1l2l_A 306 MG 307 (457)
T ss_dssp TT
T ss_pred cC
Confidence 33
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00059 Score=62.19 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=88.5
Q ss_pred ccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC--C
Q 020650 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW--E 215 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~--~ 215 (323)
+..|.+.+++ .+..+++.+..++ +. . ++++|-..-. .. .+...++...|+.+|..|++.|++..+. +
T Consensus 291 ~~~~a~~iGP-GlG~~~~~l~~~l---~~-~-p~VlDADaL~----~~-~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGM-GLENIPKDFNRWL---EL-A-PCVLDAGVFY----HK-EILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECT-TCSSCCTTHHHHH---HH-S-CEEEEGGGGG----SG-GGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcC-CCCCCHHHHHHHH---hc-C-CEEEECcccC----Cc-hhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 5678888864 2222222133333 23 4 8888875422 11 1223445668899999999999986221 1
Q ss_pred ----CCCHHHHHHHHhcCCccccCC-ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhc
Q 020650 216 ----TDDVEEIALKLSQWPKASEIR-KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 290 (323)
Q Consensus 216 ----~~~~~~~~~~l~~~~~~~~~~-~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~ 290 (323)
.++..++++.+ .+.. ...++++ |..- +++++++.+..+. ...-..+.|.||++.+.+.+.|.+
T Consensus 360 ~~~~~~d~~~aa~~l------a~~~g~~~VvlK-G~~~-vI~~~~~~~~~~~----g~~~mat~GtGdvLsg~Iaa~lA~ 427 (475)
T 3k5w_A 360 MLELLDNKLEIARDF------SQKYPKVVLLLK-GANT-LIAHQGQVFINIL----GSVALAKAGSGDVLAGLILSLLSQ 427 (475)
T ss_dssp TTSGGGSCC--CHHH------HHHCTTEEEEEC-SSSE-EEEETTEEEEECC----CCGGGCSTTHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHH------HHHcCCeEEEEe-CCCC-EEECCCEEEEECC----CCCCCCCCCHHHHHHHHHHHHHHc
Confidence 12344555665 2322 3445555 5443 4445555544332 113456899999999999999999
Q ss_pred CCCHHHHHHHHhHHHHHHh
Q 020650 291 EKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 291 g~~~~~a~~~A~~~Aa~~~ 309 (323)
|.++.+|+..|..+-+..-
T Consensus 428 g~~~~~Aa~~a~~lhg~ag 446 (475)
T 3k5w_A 428 NYTPLDAAINASLAHALAS 446 (475)
T ss_dssp TCCHHHHHHHHHHHHHHGG
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999888766554443
|
| >1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.051 Score=49.05 Aligned_cols=164 Identities=11% Similarity=-0.005 Sum_probs=89.9
Q ss_pred ecCchHHHHHHHHHHhcCCCCcEEE--EeeeecCchhHHHHHHHHHcCceeEEeec-------------CCCCceeEEEE
Q 020650 41 IAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYED-------------ESASTGTCAVC 105 (323)
Q Consensus 41 ~~GG~~~n~a~~l~~l~g~g~~v~~--~~~vG~D~~g~~i~~~l~~~gi~~~~~~~-------------~~~~t~~~~~~ 105 (323)
+.||.+.-+|..++. +| .++.+ ++.+| +...+.|...+|..-.+.. .+..--..++.
T Consensus 117 ~mGGnAgimAn~la~-lg--~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~E 188 (467)
T 1gc5_A 117 RIGGQAGIMANLLGG-VY--RIPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYE 188 (467)
T ss_dssp EEESHHHHHHHHHHH-TS--CCCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEE
T ss_pred ccCccHHHHHHHHHh-cC--CCEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEE
Confidence 999999999999987 55 77766 55444 4445555434443221110 11222223333
Q ss_pred EeCCccce-eecccccccC---Ccc--cCCC-cchhhhhc----cccEEEEeccccccC----HH----HHH---HHHHH
Q 020650 106 VVGGERSL-VANLSAANCY---KSE--HLKK-PENWALVE----KAKYFYIAGFFLTVS----PD----SIQ---LVAEH 163 (323)
Q Consensus 106 ~~~g~~~~-~~~~~~~~~~---~~~--~~~~-~~~~~~~~----~~~~v~i~~~~~~~~----~~----~~~---~~~~~ 163 (323)
+..|++.- +..+.+++-+ ++. .+.. +++.+.+. .+|+++++|++..-. .+ -+. +.++.
T Consensus 189 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~ 268 (467)
T 1gc5_A 189 FPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNI 268 (467)
T ss_dssp ECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHH
T ss_pred cCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHh
Confidence 44454321 1222222111 111 1211 23334444 499999999985322 12 122 22233
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
+...++++-+.+.+..-.+.....+ .+++++|.+-+|++|+..+....+
T Consensus 269 l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg 317 (467)
T 1gc5_A 269 LNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEIIG 317 (467)
T ss_dssp HHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTT
T ss_pred hcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcC
Confidence 2456788888886544333345556 899999999999999987665444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 323 | ||||
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 2e-60 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 8e-47 | |
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 1e-26 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 4e-19 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 3e-18 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 2e-17 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 6e-16 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 1e-15 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 1e-15 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 1e-15 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 4e-15 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 4e-14 | |
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 8e-13 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 2e-08 | |
| d1lhpa_ | 309 | c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) | 2e-04 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (493), Expect = 2e-60
Identities = 186/341 (54%), Positives = 248/341 (72%), Gaps = 20/341 (5%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNK------------------YDEMASKYNVEYIAGG 44
+E IL GMGNPLLDIS+VVD DFL+K +DE+ K+ VEY AGG
Sbjct: 2 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 61
Query: 45 ATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCA 103
+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 62 STQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCA 121
Query: 104 VCVVGGERSLVANLSAANCYKS-EHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162
C+ G RSL+ANL+AANCYK +HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 122 ACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAH 181
Query: 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++EI
Sbjct: 182 HASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 241
Query: 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 282
A K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFVG
Sbjct: 242 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 301
Query: 283 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 323
GFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 302 GFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 342
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 159 bits (402), Expect = 8e-47
Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 38/347 (10%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYD-----------------EMASKYNVEYIAGGATQNS 49
+ +GNP+LD+ + V FL+++ ++N + GG+ NS
Sbjct: 6 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNS 65
Query: 50 IRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGG 109
+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STG CAV +
Sbjct: 66 VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEK 125
Query: 110 ERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK 169
ER+L +L A ++ ++ A +++++ N
Sbjct: 126 ERTLCTHLGACGSFRLPEDWTTFASG---ALIFYATAYTLTATPKNALEVAGYAHGIPNA 182
Query: 170 VFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ- 228
+F +NLSAPF E +KDA++ +L + + +FGNE E +KV + ++ +
Sbjct: 183 IFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEH 242
Query: 229 ------------WPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDKLV 271
+ + V+T+G +PV+ A+ + + V V+ +K+V
Sbjct: 243 AVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIV 302
Query: 272 DTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 318
DTNGAGDAFVGGFL L Q K +++C+ G + +IQ G +
Sbjct: 303 DTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSF 349
|
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 105 bits (262), Expect = 1e-26
Identities = 44/328 (13%), Positives = 110/328 (33%), Gaps = 32/328 (9%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
++ G +L +S + + + + GGA N VA ++ Q+ ++
Sbjct: 6 VVTFGEIMLRLSPP-------DHKRIFQTDSFDVTYGGAEAN---VAAFLAQMGLDAYFV 55
Query: 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER-SLVANLSAANCYKS 125
+ + G+ + + GV Y G + + +R S V A +
Sbjct: 56 TKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISE 115
Query: 126 EHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV------AEHAAANNKVFMMNLSAPF 179
+ + +++ A++F+ +G + + ++ A + + +
Sbjct: 116 AKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLW 175
Query: 180 ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW---------ETDDVEEIALKLSQWP 230
E + + + Y+D + NE + + + +IA ++++
Sbjct: 176 TKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKY 235
Query: 231 KASEI---RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 287
+ + + T V+V ++G+ + +VD GAGD+F G +
Sbjct: 236 NFKTVGITLRESISATVNYWSVMVFENGQPHFSNR---YEIHIVDRVGAGDSFAGALIYG 292
Query: 288 LVQEKPIEECVRAGCYTSHVIIQRSGCT 315
+ ++ S + G
Sbjct: 293 SLMGFDSQKKAEFAAAASCLKHTIPGDF 320
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 83.9 bits (206), Expect = 4e-19
Identities = 38/316 (12%), Positives = 94/316 (29%), Gaps = 20/316 (6%)
Query: 12 NPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGK 71
NP LD ++D +N+ + + GG N V+ + ++ + G +G
Sbjct: 8 NPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGIN---VSIALSKLGVPSVATGFVGG 64
Query: 72 DKFGEEMKKNSKLAGVNV-HYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLK 129
G+ + + + + + T + + N + +
Sbjct: 65 Y-MGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPGPDVTDMDVNH 123
Query: 130 KPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALE 189
+ + + + + A + + + + +
Sbjct: 124 FLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQ---TPRLLERIY 180
Query: 190 KVLPYMDYIF-GNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP 248
+ + + + +F V DD ++A KL++ + S V++
Sbjct: 181 EGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKSQVS-------VVSYEVKN 233
Query: 249 VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECVRAGCYTSHV 307
+VA + + + GAGDA+V G + + E + G ++
Sbjct: 234 DIVATREG--VWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALA 291
Query: 308 IIQRSGCTYPEKPEFN 323
+R P+
Sbjct: 292 ATRRKEKYMPDLEAIK 307
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 81.2 bits (199), Expect = 3e-18
Identities = 41/282 (14%), Positives = 80/282 (28%), Gaps = 34/282 (12%)
Query: 37 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 96
E GG A + T I ++ + + GV V + +
Sbjct: 25 KREIAYGGGVVM---GAITSSLLGVKTKVITKCTREDVSK--FSFLRDNGVEVVFLKSPR 79
Query: 97 ASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT-VSPD 155
++ R SAA+ + L + + +I + D
Sbjct: 80 TTSIENRYGSDPDTRESFLI-SAADPFTESDLA-------FIEGEAVHINPLWYGEFPED 131
Query: 156 SIQLVAEHA---AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 212
I ++ +A+ + F+ + + EK L Y+D + EA T +
Sbjct: 132 LIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTN 191
Query: 213 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVD 272
+ + ++ A V+V F L
Sbjct: 192 DLR------------ESCRIIRSFGAKIILATHASGVIVFDG----NFYEASFRSWSLEG 235
Query: 273 TNGAGDAFVGGFL-SQLVQEKPIEECVRAGCYTSHVIIQRSG 313
G GD FL + ++ IE+ + + V ++ G
Sbjct: 236 RTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 277
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 79.0 bits (193), Expect = 2e-17
Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 19/312 (6%)
Query: 12 NPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGK 71
NP +DIS ++D K D + V GG N V + + + G G +G
Sbjct: 8 NPSIDISYLLDHL---KLDTVNRTSQVTKTPGGKGLN---VTRVIHDLGGDVIATGVLGG 61
Query: 72 DKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP 131
G + K A + + + + + A+ G + ++ + + + +
Sbjct: 62 F-HGAFIANELKKANIPQAFTSIKEETRDSIAILHEGNQTEILEAGPTVSPEEISNFLEN 120
Query: 132 ENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKV 191
+ + ++A+ I+G P E + + L +
Sbjct: 121 FDQLI-KQAEIVTISGSLAKGLPSDF--YQELVQKAHAQEVKVLLDTSGDSLRQVLQGPW 177
Query: 192 LPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVV 251
PY+ E E V+ K VI+ G D +
Sbjct: 178 KPYLIKPNLEELEGLLGQDFSENPLAAVQT------ALTKPMFAGIEWIVISLGKDGAIA 231
Query: 252 AQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311
+ + + P + + G+GDA + G L ++ P E ++ G Q
Sbjct: 232 KHHDQFYRVKI---PTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQE 288
Query: 312 SGCTYPEKPEFN 323
+ +
Sbjct: 289 RMTGHVDVENVK 300
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 74.8 bits (182), Expect = 6e-16
Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 23/310 (7%)
Query: 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 64
G L+ +G+ D + E + + + GG N A + +
Sbjct: 2 GSLVVLGSINADHILNLQS--FPTPGETVTGNHYQVAFGGKGAN---QAVAAGRSGANIA 56
Query: 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYK 124
+I C G D GE +++ +++ + A+ V GE N+ +
Sbjct: 57 FIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGE---NVIGIHAGA 113
Query: 125 SEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFF 184
+ L A E+ L +S+ A+ A N + +N
Sbjct: 114 NAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALN------PAPA 167
Query: 185 KDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 244
++ +++L +D I NETEA + ++ +D + E RT +IT
Sbjct: 168 RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKA------AQVLHEKGIRTVLITL 221
Query: 245 GADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 304
G+ V + +G+ ++ P + + VDT AGD F G ++ L++EKP+ E +R
Sbjct: 222 GSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAA 278
Query: 305 SHVIIQRSGC 314
+ + + R G
Sbjct: 279 AAIAVTRKGA 288
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 74.0 bits (180), Expect = 1e-15
Identities = 50/317 (15%), Positives = 99/317 (31%), Gaps = 26/317 (8%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
++ G PL+ + K +E GGA N VA + ++ ++
Sbjct: 4 VVTAGEPLVALVPQEPGHLRGKRL-------LEVYVGGAEVN---VAVALARLGVKVGFV 53
Query: 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE 126
G +G+D+ G +++ + GV++ ++ TG + S
Sbjct: 54 GRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLY-LREYLPLGQGRVFYYRKGSAGSA 112
Query: 127 HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKD 186
+ +E ++ +++G +SP++ + + +
Sbjct: 113 LAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTL-- 170
Query: 187 ALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA 246
R V + E L + V+ +GA
Sbjct: 171 --------WSPEEARGFLERALPGVDLLFLSEEEAELLFGRVEEALRALSAPEVVLKRGA 222
Query: 247 DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSH 306
DG+ + + VD GAGDAF G+L+ V P+EE +R
Sbjct: 223 KGAWAFVDGRRVEGSA---FAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGA 279
Query: 307 VIIQRSGCT--YPEKPE 321
+ G P + +
Sbjct: 280 SVAASRGDHEGAPYRED 296
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 74.0 bits (180), Expect = 1e-15
Identities = 66/316 (20%), Positives = 107/316 (33%), Gaps = 34/316 (10%)
Query: 11 GNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIG 70
G+ +DI VD K E + GG N + ++ CIG
Sbjct: 9 GSSNIDIVLKVDH--FTKPGETQKAIEMNVFPGGKGANQAVTVA-KIGEK-GCRFVTCIG 64
Query: 71 KDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV-CVVGGERSLVANLSAANCYKSEHLK 129
D + + + +N + + Y S TG + G+ ++ A K E +
Sbjct: 65 NDDYSDLLIEN--YEKLGITGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI- 121
Query: 130 KPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALE 189
+W + ++ + N F + E
Sbjct: 122 ---DWNTLSESDILLLQNEIP------------FETTLECAKRFNGIVIFDPAPAQGINE 166
Query: 190 KVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV 249
++ Y+DY+ NE E SK E VE+ K E+ + ++ G V
Sbjct: 167 EIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK------AAEKFLELGVKNVIVKLGDKGV 220
Query: 250 VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309
++ + K FP K K VDT AGD F G F L + K EE V G + + +
Sbjct: 221 LLVNKNEKKHFPT---FKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISV 277
Query: 310 QRSGC--TYPEKPEFN 323
R G + P + E
Sbjct: 278 TRLGAQSSIPAREEVE 293
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 74.0 bits (180), Expect = 1e-15
Identities = 47/309 (15%), Positives = 98/309 (31%), Gaps = 27/309 (8%)
Query: 12 NPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGK 71
NP +D V++ + + GG N V++ + ++ T +G +G
Sbjct: 8 NPSIDYIVQVEN---FQQGVVNRSERDRKQPGGKGIN---VSRVLKRLGHETKALGFLGG 61
Query: 72 DKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP 131
G ++ + + + + E E T + G++ N +A K
Sbjct: 62 F-TGAYVRNALEKEEIGLSFIEVE---GDTRINVKIKGKQETELNGTAPLIKKEHVQALL 117
Query: 132 ENWALVEKAKYFYIAGFFLTVSPDSI-QLVAEHAAANNKVFMMNLSAPFICEFFKDALEK 190
E +EK +AG P +I + + + A ++ S + E
Sbjct: 118 EQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHEVLAAKPSF 177
Query: 191 VLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVV 250
+ P + ++ + + ++ A + + V
Sbjct: 178 IKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNV- 236
Query: 251 VAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310
P ++ ++ GAGD+ V GFL+ L + K +E+ V
Sbjct: 237 ---------------PSGEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAF 281
Query: 311 RSGCTYPEK 319
G E+
Sbjct: 282 SDGFCTREE 290
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (175), Expect = 4e-15
Identities = 61/319 (19%), Positives = 110/319 (34%), Gaps = 24/319 (7%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
++ +G+ + D+ S+ L K E + GG N ++ TS +
Sbjct: 4 VVVVGSCMTDLVSLTSR--LPKTGETIHGHKFFIGFGGKGAN---QCVQAARLGAMTSMV 58
Query: 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE 126
+GKD FG + +N K ++ + + A +V E N+ +
Sbjct: 59 CKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQ---NIIVIVAGANL 115
Query: 127 HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKD 186
L + A + L ++P + A + + D
Sbjct: 116 LLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLF-----NPAPAIAD 170
Query: 187 ALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA 246
+ D NE+EA + + D E + + +IT GA
Sbjct: 171 LDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGE------AALVLLKRGCQVVIITLGA 224
Query: 247 DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL--VQEKPIEECVRAGCYT 304
+ VV + + + K K VDT GAGD+FVG L +E+ + +
Sbjct: 225 EGCVVLSQTEPEPKHIPT-EKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFI 283
Query: 305 SHVIIQRSGC--TYPEKPE 321
+ V +Q +G +YP K +
Sbjct: 284 AAVSVQAAGTQSSYPYKKD 302
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 69.5 bits (168), Expect = 4e-14
Identities = 43/319 (13%), Positives = 95/319 (29%), Gaps = 21/319 (6%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
L+ +G L++ +++ + E G+ N ++ I
Sbjct: 3 LITLGEILIEFNALSPG-------PLRHVSYFEKHVAGSEAN---YCVAFIKQGNECGII 52
Query: 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE 126
+G D+FG + + GV+V + + + ++ L + +
Sbjct: 53 AKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAG 112
Query: 127 HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKD 186
PE+ + +T++ S A + A + + + +
Sbjct: 113 SKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNRSFDTNIRLKLWSAE 172
Query: 187 ALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA 246
++ + + F + + + + A K + K +GA
Sbjct: 173 EAKREILKLLSKFHLKFLITDTDDSKIILGESDPDKAAKAFSDYAEIIVMKLGP---KGA 229
Query: 247 DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSH 306
+ + V V D GAGDA G FLS + +E+ + S
Sbjct: 230 IVYYDGKKYYSSGYQVPV------EDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVAST 283
Query: 307 VIIQRSGCT--YPEKPEFN 323
+ + G P +
Sbjct: 284 LNVMIRGDQENLPTTKDIE 302
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 65.6 bits (158), Expect = 8e-13
Identities = 48/313 (15%), Positives = 101/313 (32%), Gaps = 31/313 (9%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66
+ +G+ +D+ + +L GGA+ N V + ++ G +I
Sbjct: 3 VWVIGDASVDLVPEKQNSYLK-------------CPGGASAN---VGVCVARLGGECGFI 46
Query: 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE 126
GC+G D G +++ + GV+V + ++ T + + + +
Sbjct: 47 GCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTY 106
Query: 127 HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKD 186
+ + YF G + ++ A + +++ D
Sbjct: 107 VSPQDLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTD 166
Query: 187 ALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA 246
+ +++ + + + + T +I+ GA
Sbjct: 167 EIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCD-------TTIISLGA 219
Query: 247 DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ-----EKPIEECVRAG 301
D ++ FP P+ +VDT GAGDAFVGG L L + + E +
Sbjct: 220 DGALLITAEGEFHFPA---PRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNA 276
Query: 302 CYTSHVIIQRSGC 314
+ + G
Sbjct: 277 NACGAMAVTAKGA 289
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (124), Expect = 2e-08
Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 19/176 (10%)
Query: 153 SPDSIQLVAEHAAANNKVFMMNLSAPFIC-----------EFFKDALE----KVLPYMDY 197
S + + + +V N A + C E LP D
Sbjct: 86 SAEQGEHILGIVR---QVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDI 142
Query: 198 IFGNETEARTFSKVQGWETDDVEEIALKL-SQWPKASEIRKRTAVITQGADPVVVAQDGK 256
I N E + ++ A +L +Q P+ ++ ++
Sbjct: 143 IAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTAD 202
Query: 257 LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312
L + G GD G L +L+Q ++E + + I+ +
Sbjct: 203 EAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTT 258
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 40.5 bits (94), Expect = 2e-04
Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 190 KVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV 249
KV+P D I N+ EA + + ++ E+ L + + + +++
Sbjct: 136 KVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDY 195
Query: 250 VVAQDGKLKKFPVIVLPKDKL--------VDTNGAGDAFVGGFLSQLV-QEKPIEECVRA 300
++A + + P + ++ G GD F L+ ++
Sbjct: 196 LMALGSQRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEK 255
Query: 301 GCYTSHVIIQRS 312
H ++QR+
Sbjct: 256 TVSAMHHVLQRT 267
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 100.0 | |
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 100.0 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 100.0 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 100.0 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 100.0 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 100.0 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 100.0 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.67 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.5 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.38 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.37 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 98.76 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 98.39 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 98.05 | |
| d1u2xa_ | 450 | ADP-specific phosphofructokinase {Pyrococcus horik | 97.96 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.94 | |
| d1ua4a_ | 454 | ADP-dependent glucokinase {Archaeon Pyrococcus fur | 97.6 | |
| d1gc5a_ | 467 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.5 | |
| d1l2la_ | 451 | ADP-dependent glucokinase {Archaeon Thermococcus l | 96.63 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-47 Score=335.91 Aligned_cols=321 Identities=54% Similarity=0.959 Sum_probs=264.4
Q ss_pred ccceEEEeCCceeeeEeecChhHH------------------hhHHHHhhcCCceeecCchHHHHHHHHHHh-cCCCCcE
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFL------------------NKYDEMASKYNVEYIAGGATQNSIRVAQWM-LQIPGAT 63 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~------------------~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l-~g~g~~v 63 (323)
++..|+|||+.++|++..++..++ |......+.......+||++.|++.+++.+ ..+|.++
T Consensus 2 ~~~~il~iG~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GG~~~N~a~~~a~~l~~lG~~~ 81 (342)
T d1bx4a_ 2 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 81 (342)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred CCCEEEEECcceEEEEEEeCHHHHHHcCCCCCceeechhhHHHHHHHhhcccceEEeCCcHHHHHHHHHHHhccccCceE
Confidence 456899999999999998875332 233455566778889999999999886643 3467999
Q ss_pred EEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeC-CccceeecccccccCCcccCCCcchhhhhccccE
Q 020650 64 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG-GERSLVANLSAANCYKSEHLKKPENWALVEKAKY 142 (323)
Q Consensus 64 ~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (323)
.++|.+|+|.+|+.+++.|+++||+++++...+.+|+.+.+++.+ +++.+....+.......+....+.....++..++
T Consensus 82 ~~ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (342)
T d1bx4a_ 82 TFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 161 (342)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEeecCCChhhhhhhhhhhhhcccceeeeeecccceEEEEEecCCccceeeeccccccccchhhhhhhhhHHHHhhccc
Confidence 999999999999999999999999999997766777777777764 4555545444443344444333334556789999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHH
Q 020650 143 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222 (323)
Q Consensus 143 v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~ 222 (323)
+++.++......+....+++.+++.+..+.+|+..+.+.+..+..+..+++++|++++|++|++.+++.......+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ne~Ea~~l~~~~~~~~~~~~~~ 241 (342)
T d1bx4a_ 162 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 241 (342)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred ceecccccchhHHHHHHHHHHhhhccceeecccccccchhccccchhhhhccccEEeecHHHHHHhhCcCCcccchhhhh
Confidence 99999877777788888899999999999999988888777778888999999999999999999999877777788877
Q ss_pred HHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHh
Q 020650 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 302 (323)
Q Consensus 223 ~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 302 (323)
.+.+..+.+....+.+.+++|+|++|++++++++..+++.++.+..+++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~ 321 (342)
T d1bx4a_ 242 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 321 (342)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 77665443335567888999999999999988887777776667778999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCccCCCCCCCC
Q 020650 303 YTSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 303 ~~Aa~~~~~~G~~~p~~~~~~ 323 (323)
++|+++|++.|++.|+.|+|+
T Consensus 322 ~~Aa~~v~~~Ga~~p~~~d~~ 342 (342)
T d1bx4a_ 322 YAASIIIRRTGCTFPEKPDFH 342 (342)
T ss_dssp HHHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHHcCcCCCCCCCCCCC
Confidence 999999999999999999985
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=4.4e-43 Score=311.20 Aligned_cols=311 Identities=32% Similarity=0.564 Sum_probs=236.8
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhH----H-------------HHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEE
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKY----D-------------EMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 65 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~----~-------------~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~ 65 (323)
-+|+|+|||+.++|++..+++.++.+. + ......+....+||+++|+|.++++|...|..+.|
T Consensus 2 ~p~kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~g~~~~~ 81 (350)
T d2absa1 2 GPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGY 81 (350)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCcEEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHHHhhhccCceEecCcHHHHHHHHHHHhccCCccEEE
Confidence 468999999999999999886433221 0 12233355678899999999999995444689999
Q ss_pred EeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEE
Q 020650 66 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 145 (323)
Q Consensus 66 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 145 (323)
+|.+|+|.+|+.+++.|+++||+++++..++.+|+.+++++++++|+++.+.+....+...+.. ...+...+++++
T Consensus 82 ig~vG~D~~G~~i~~~l~~~gv~~~~~~~~~~~t~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 157 (350)
T d2absa1 82 MGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPEDW----TTFASGALIFYA 157 (350)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCTTH----HHHTTTCCEEEE
T ss_pred EecCCCChhhHhHHHHHHhcCCcccccccccccceEEEEEeeccCcceEeeecccccccccccc----cccccccccccc
Confidence 9999999999999999999999999988788889999998888888887777666555544432 356788899999
Q ss_pred eccccccCHH-HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCC-------
Q 020650 146 AGFFLTVSPD-SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD------- 217 (323)
Q Consensus 146 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~------- 217 (323)
.++.+..... ....+...++..+..+.+++..+.+.+...+..+.+++++|++++|++|++.+++.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~N~~E~~~l~~~~~~~~~~~~~~~~ 237 (350)
T d2absa1 158 TAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALST 237 (350)
T ss_dssp EGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC---------
T ss_pred eeeeeccccchhHHHHHHhhhhccceEEEecchhhhhhhhhcchhhhcccCCEEEecHHHHHHHhCCCCchhhHHHHhhh
Confidence 8876544443 34444455556678899999888877777777888999999999999999999876433211
Q ss_pred -CHHH---HH---HHHhcCCccccCCccEEEEeeCCCceEEeeCCe-----eeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 218 -DVEE---IA---LKLSQWPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 218 -~~~~---~~---~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~-----~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
..++ .. .++..... ...+.+.+++|+|++|+++++++. .++++.++.+..+++|||||||+|+|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDttGAGDaF~ag~l 316 (350)
T d2absa1 238 ANKEHAVEVCTGALRLLTAGQ-NTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFL 316 (350)
T ss_dssp -CHHHHHHHHHHHHHHHHTTC-CCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhhh-hccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCCcHHHHHHHHHH
Confidence 1111 11 11110000 234688999999999999986542 23444333344578999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCC
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~ 318 (323)
++|++|+++++|+++|+++|+.+|++.|+++|.
T Consensus 317 ~~ll~g~~~~~al~~a~~~Aa~~v~~~Ga~l~~ 349 (350)
T d2absa1 317 YALSQGKTVKQCIMCGNACAQDVIQHVGFSLSF 349 (350)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCCC
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999999999999999999999999999885
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.7e-42 Score=299.64 Aligned_cols=287 Identities=23% Similarity=0.312 Sum_probs=239.9
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCc-EEEEeeeecCchhHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~-v~~~~~vG~D~~g~~i~~~ 81 (323)
|.|+|+|+|++++|++..+++ +|.+++.++..+...++||.++|+|.+|++ +| .+ +.++|.+|+|..|+.+++.
T Consensus 1 ~~m~I~ViG~~~~D~~~~v~~--~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~-lG--~~~~~~i~~vG~D~~g~~~~~~ 75 (299)
T d1vm7a_ 1 MFLVISVVGSSNIDIVLKVDH--FTKPGETQKAIEMNVFPGGKGANQAVTVAK-IG--EKGCRFVTCIGNDDYSDLLIEN 75 (299)
T ss_dssp CCCCEEEECCCEEEEEEECSS--CCCTTCEEECSEEEEEEECHHHHHHHHHHH-HH--SSCEEEEEEECSSHHHHHHHHH
T ss_pred CeeEEEEeCeeeEEEEEEeCC--CCCCCcEEeeeeEEEecCCHHHHHHHHHHH-cC--CCceEEEEeeeccchhHHHHHH
Confidence 446899999999999999999 888899999999999999999999999998 55 65 8999999999999999999
Q ss_pred HHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 82 SKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 82 l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
|++.||++..+. +.+|+.+.+.++ +|+|+++...+....+++++++. ..+...+++++.+.. +. ...
T Consensus 76 l~~~gv~~~~~~--~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~~~~~~~~---~~---~~~ 143 (299)
T d1vm7a_ 76 YEKLGITGYIRV--SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDW----NTLSESDILLLQNEI---PF---ETT 143 (299)
T ss_dssp HHHTTEEEEEEC--SSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHTTCSEEEECSSS---CH---HHH
T ss_pred Hhhhcccccccc--ccccceeEEEecCCCCeeEeccCCcchhCCHhHhCh----hhcccccceeecccc---cc---hhh
Confidence 999999987764 456888887776 68888877777777777777753 567788999997643 22 233
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
.+..++.+..+.++.....+ ....+++.+|++++|.+|+............+.+...+.+ ...+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~v 211 (299)
T d1vm7a_ 144 LECAKRFNGIVIFDPAPAQG------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKF------LELGVKNV 211 (299)
T ss_dssp HHHHHHCCSEEEECCCSCTT------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHH------HHTTCSEE
T ss_pred hHhhhhcCceEEEecCcchh------hhHHHHhhcccccccHHHHHhhhccccccchhhhhhhhhh------hcCCCcEE
Confidence 44566778888888765432 1235678899999999999988776555567788888877 66789999
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--CCC
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPE 318 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p~ 318 (323)
++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|.+|+++++|+++|+++|+++|++.|+. .|+
T Consensus 212 vvt~G~~g~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~Ag~i~~l~~g~~~~~al~~a~~~aa~~~~~~G~~~~~p~ 288 (299)
T d1vm7a_ 212 IVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPA 288 (299)
T ss_dssp EEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSGGGCCC
T ss_pred EEeCCCCceEEEeccceEEEeeeee---eeECCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCcCCCCCCCCC
Confidence 9999999999999999988887554 79999999999999999999999999999999999999999999984 577
Q ss_pred CCC
Q 020650 319 KPE 321 (323)
Q Consensus 319 ~~~ 321 (323)
++|
T Consensus 289 ~~e 291 (299)
T d1vm7a_ 289 REE 291 (299)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.4e-40 Score=286.54 Aligned_cols=284 Identities=22% Similarity=0.306 Sum_probs=222.9
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|||++++|++...+ +...+......++||.++|+|.+|++ +| .+|.++|.+|+|..|+.+++.|++
T Consensus 2 ~~i~viG~~~vD~~~~~~-------~~~~~~~~~~~~~GG~~~Nva~~l~~-lg--~~v~~~~~iG~D~~g~~i~~~l~~ 71 (302)
T d1v19a_ 2 LEVVTAGEPLVALVPQEP-------GHLRGKRLLEVYVGGAEVNVAVALAR-LG--VKVGFVGRVGEDELGAMVEERLRA 71 (302)
T ss_dssp CSEEEESCCEEEEEESSS-------SCGGGCSEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHHHHHH
T ss_pred CeEEEECcceEEEecCCC-------CceeecceEEEecCcHHHHHHHHHHH-cC--CCEEEEEEEcCCcccccchhhhhh
Confidence 379999999999876433 45566677888999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccccCH---HHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP---DSIQ 158 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~---~~~~ 158 (323)
.||++.++...+..++.+.+.+. ++++++.... .....++.++.. ...+++.++++++++.+...+ +...
T Consensus 72 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (302)
T d1v19a_ 72 EGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFD----PDYLEGVRFLHLSGITPALSPEARAFSL 147 (302)
T ss_dssp HTCBCTTEEEESSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSC----GGGGTTCSEEEEETHHHHHCHHHHHHHH
T ss_pred cccccchhccccccccccchhhccccccccccccccccchhhcccccc----HHHHhcccEEeeeccccccchhHHHHHH
Confidence 99999998654455666665554 6777654332 222233333333 355788999999887754443 5677
Q ss_pred HHHHHHHhCCCeEEEeCCch---hHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 159 LVAEHAAANNKVFMMNLSAP---FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
.+++..++.++.+.+|+... .......+.+...++.+|+++.|++|++...+. ..+. + ...
T Consensus 148 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~-------~~~~---~------~~~ 211 (302)
T d1v19a_ 148 WAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR-------VEEA---L------RAL 211 (302)
T ss_dssp HHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS-------TTHH---H------HHT
T ss_pred HHHHHHHhcCCccccccchhhhccchhhhHHHHHhhhhhccchhhhhhhhhhhhhh-------hhhh---h------hhc
Confidence 88889999999988887432 122334555778899999999999999877642 1122 2 234
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~ 315 (323)
+.+.++||+|++|++++++++.+++|++++ +++|||||||+|+|||+|++++|+++++|+++|+++|++++++.|+.
T Consensus 212 ~~~~viit~G~~G~~~~~~~~~~~~p~~~v---~vvDttGAGDaf~a~~~~~~~~g~~~~~a~~~a~~~Aa~~v~~~G~~ 288 (302)
T d1v19a_ 212 SAPEVVLKRGAKGAWAFVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDH 288 (302)
T ss_dssp CCSEEEEECTTSCEEEEETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSS
T ss_pred cceEEEEecCCCCCcccccccccccccccc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCC
Confidence 678899999999999999999999987654 79999999999999999999999999999999999999999999984
Q ss_pred --CCCCCC
Q 020650 316 --YPEKPE 321 (323)
Q Consensus 316 --~p~~~~ 321 (323)
.|+.++
T Consensus 289 ~~~p~~~~ 296 (302)
T d1v19a_ 289 EGAPYRED 296 (302)
T ss_dssp TTCCCHHH
T ss_pred CCCCCHHH
Confidence 566544
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=3e-40 Score=288.59 Aligned_cols=294 Identities=18% Similarity=0.177 Sum_probs=231.4
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
.+.+.-++++|++..+++ + .++...++.....++||+++|+|.++++ +| .++.++|.+|+| .+..+.+.|+++
T Consensus 2 ~~~~~~np~vD~~~~vd~--~-~~g~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~~~~~~~vGdd-~~~~i~~~l~~~ 74 (313)
T d2f02a1 2 IVTVTMNPSIDISYLLDH--L-KLDTVNRTSQVTKTPGGKGLNVTRVIHD-LG--GDVIATGVLGGF-HGAFIANELKKA 74 (313)
T ss_dssp EEEEESSCEEEEEEECSC--C-CTTSEEEESCEEEEEESHHHHHHHHHHH-HT--CCEEEEEEEEHH-HHHHHHHHHHHT
T ss_pred EEEEeCChHHcEEEEeCC--c-cCCCEEEeCeeeecCCCHHHHHHHHHHH-CC--CCEEEEEEecCc-cHHHHHHHHHhh
Confidence 355556788999999998 5 4577788889999999999999999998 66 899999999976 688999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAE 162 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~ 162 (323)
||+++++.... +|+.++.++++++++.+...+ ..++++++.. ....+.+..+|+++++++.+ ....+.+..+++
T Consensus 75 gi~~~~i~~~~-~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 151 (313)
T d2f02a1 75 NIPQAFTSIKE-ETRDSIAILHEGNQTEILEAG--PTVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQ 151 (313)
T ss_dssp TCCBCCEEESS-CCEEEEEEEETTEEEEEEECC--CBCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHH
T ss_pred ccCceEEEeec-CCceEEEEEeCCCceEEeecc--ccCCHHHHHHHHHHhhhhhcccceEEEecccccccCHHHHHHHHH
Confidence 99999986543 577777777766655443322 3444444432 12345678999999998654 234678899999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.+++.+.++.+|++... ..+ ....+...|++++|++|++.+++.... .++.....+.+.++ ...+++.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l~~n~~E~~~l~g~~~~-~~~~~~~~~~~~~~---~~~g~~~viv 222 (313)
T d2f02a1 152 KAHAQEVKVLLDTSGDS----LRQ-VLQGPWKPYLIKPNLEELEGLLGQDFS-ENPLAAVQTALTKP---MFAGIEWIVI 222 (313)
T ss_dssp HHHHTTCEEEEECCTHH----HHH-HHHSSCCCSEECCBHHHHHHHHTCCCC-SSCHHHHHHHHTSG---GGTTCSEEEE
T ss_pred HHHhcCCceeecchHHH----HHH-HhhhcccceEEEehhhhHHHhhccccc-cchhhHHHHHHHHH---HhcCCceeEE
Confidence 99999999999987654 222 334567899999999999999874322 23333333333222 5678999999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPE 321 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~~ 321 (323)
|+|++|++++++++.+++++++ ++++|||||||+|.|||+|+|.+|+++++|+++|+++|++++++.|+..|+.++
T Consensus 223 T~G~~Ga~~~~~~~~~~~~~~~---v~vvDttGAGD~f~ag~i~~l~~g~~~~~al~~A~a~aa~~~~~~g~~~~~~e~ 298 (313)
T d2f02a1 223 SLGKDGAIAKHHDQFYRVKIPT---IQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTGHVDVEN 298 (313)
T ss_dssp ECGGGCEEEEETTEEEEEECCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSSSCCCHHH
T ss_pred ecccceEEEEeCCceEeccccc---CCCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999999999999888654 479999999999999999999999999999999999999999999998787543
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.5e-41 Score=290.90 Aligned_cols=293 Identities=23% Similarity=0.325 Sum_probs=226.7
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
.+|+|+|++++|++..+++ +|.+++.++..+....+||++.|+|.+|++ +| .+|.++|.+|+|..|+.+++.+++
T Consensus 2 ~~IlviG~~~~D~~~~v~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~v~~~~~vG~d~~~~~~~~~l~~ 76 (306)
T d1rkda_ 2 GSLVVLGSINADHILNLQS--FPTPGETVTGNHYQVAFGGKGANQAVAAGR-SG--ANIAFIACTGDDSIGESVRQQLAT 76 (306)
T ss_dssp CEEEEECCCEEEEEEECSS--CCCTTCCCCCCCEEEEEECHHHHHHHHHHH-HT--CEEEEEEEEESSTTHHHHHHHHHT
T ss_pred CEEEEEceeeEEEEEeeCC--CCCCCceEeeceEEEecCCHHHHHHHHHHH-cC--CCEEEEEEECCccccchhhhcccc
Confidence 3799999999999999999 788888888888999999999999999998 66 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+|+++.++. .....++.+..... ++.+................... ..........+.... ....+.......
T Consensus 77 ~gi~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 151 (306)
T d1rkda_ 77 DNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANASALLMQL---ESPLESVMAAAK 151 (306)
T ss_dssp TTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSEEEECS---SSCHHHHHHHHH
T ss_pred ccccccccccccccccccceeeEeecCcceeeeeccchhhhhhhhhhh--hHhhhhhheeeeecc---cchhhhhhhHHH
Confidence 999999985 56666777766665 56666555444333333332221 122223334443332 234556666666
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.....+......+.... +....++++.|++++|.+|+..+++.......+...+.+.+ ...+.+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~viv 219 (306)
T d1rkda_ 152 IAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVL------HEKGIRTVLI 219 (306)
T ss_dssp HHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHH------HHTTCSEEEE
T ss_pred HhhhcccccccCchhhh------hhHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHHHH------hhcCCcEEEE
Confidence 66677766655553321 22456789999999999999999875443333344444555 5678899999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--CCCCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKP 320 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p~~~ 320 (323)
|+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+++|+++|++.|+. +|+++
T Consensus 220 t~G~~g~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~Ag~l~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ 296 (306)
T d1rkda_ 220 TLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWRE 296 (306)
T ss_dssp ECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGCCCHH
T ss_pred ecCCceEEEeecCceEEeCCccC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCHH
Confidence 99999999999999999987654 79999999999999999999999999999999999999999999984 68776
Q ss_pred CC
Q 020650 321 EF 322 (323)
Q Consensus 321 ~~ 322 (323)
|+
T Consensus 297 ev 298 (306)
T d1rkda_ 297 EI 298 (306)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=5.3e-41 Score=292.45 Aligned_cols=282 Identities=18% Similarity=0.197 Sum_probs=224.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-+.|..++++|++..+++ +| ++...+..+....+||++.|+|.+|++ +| .++.++|.+|+| .|+.+++.|++.
T Consensus 2 ~~~~~~np~iD~~~~v~~--~~-~g~~~~~~~~~~~~GG~~~N~A~~l~~-lG--~~~~~ig~vG~D-~g~~i~~~L~~~ 74 (306)
T d2abqa1 2 IYTVTLNPSIDYIVQVEN--FQ-QGVVNRSERDRKQPGGKGINVSRVLKR-LG--HETKALGFLGGF-TGAYVRNALEKE 74 (306)
T ss_dssp EEEEESSCEEEEEEECTT--CC-SSSEEECSEEEEEEECHHHHHHHHHHH-TT--CCCEEEEEEEHH-HHHHHHHHHHHT
T ss_pred EEEEeCchhHeEEEEeCC--cC-CCCeEEcCeeeecCCCHHHHHHHHHHH-cC--CCEEEEEEecCc-cHHHHHHHHHhc
Confidence 567888999999999998 55 578888888899999999999999998 66 999999999998 699999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC-cchhhhhccccEEEEecccc-ccCHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK-PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~ 163 (323)
||+++++...+ .|+.++... ++.+..+. ........+++.. ......+...++++++++.+ ....+....+++.
T Consensus 75 gi~~~~v~~~~-~t~~~i~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (306)
T d2abqa1 75 EIGLSFIEVEG-DTRINVKIK-GKQETELN--GTAPLIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQI 150 (306)
T ss_dssp TCEECCEEESS-CCEEEEEEE-SSSCEEEB--CCCCCCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHH
T ss_pred ccccccceeee-eeEEEEEEe-cccccccc--cccccCCHHHhhhhhhhHhhhccCCEEEEcCccccchHHHHHHHHHHH
Confidence 99999987643 466654443 33222222 1122223333321 11234567789999988653 2345678889999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++++.++.+|+.... ..+..+..+|++++|..|+..+++....+.++..++++.+ ...+.+.+++|
T Consensus 151 a~~~~~~~~~d~~~~~-------~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~vvit 217 (306)
T d2abqa1 151 AKERGAFVAVDTSGEA-------LHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRL------IGEGIESILVS 217 (306)
T ss_dssp HHTTTCEEEEECCHHH-------HHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHH------HHTTCCEEEEE
T ss_pred HHHcCCceeccchhhH-------HHHHhhhcceeecccccccccccccccccccchhhccccc------ccccccceeee
Confidence 9999999999997533 2345678999999999999999886544444556677777 66788999999
Q ss_pred eCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 244 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 244 ~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
+|++|++++++++.+++++++ .+++||+||||+|.|||+++|++|+++++|+.+|+++|++++++.|.
T Consensus 218 ~G~~G~~~~~~~~~~~~~~~~---~~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~aa~~~~~~G~ 285 (306)
T d2abqa1 218 FAGDGALFASAEGMFHVNVPS---GEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSDGF 285 (306)
T ss_dssp CGGGCEEEEETTEEEEECCCC---CCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSC
T ss_pred ecccCcccccccccccccccC---CccCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999998887654 48999999999999999999999999999999999999999999995
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-40 Score=289.91 Aligned_cols=293 Identities=25% Similarity=0.309 Sum_probs=226.1
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++..+++ +|.+++.+...+...++||.+.|+|.+|++ +| .+|.++|.+|+|..|+.+.+.|+++
T Consensus 3 ~i~viG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~-lg--~~v~~is~vG~D~~g~~i~~~L~~~ 77 (308)
T d2fv7a1 3 AVVVVGSCMTDLVSLTSR--LPKTGETIHGHKFFIGFGGKGANQCVQAAR-LG--AMTSMVCKVGKDSFGNDYIENLKQN 77 (308)
T ss_dssp SEEEECCCEEEEEEECSS--CCCTTCCCCCSEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHHHHHTT
T ss_pred EEEEEChhheEeEeecCC--CCCCCceEeeceEEEecCCHHHHHHHHHHH-CC--CCEEEEEEeccccccccccchhccc
Confidence 799999999999999999 888898888888899999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~ 163 (323)
||+++++. ....++..+.+..+ ++++.+....+....+....+.. .........+.++. ....++......+.
T Consensus 78 gi~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 152 (308)
T d2fv7a1 78 DISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRAKVMVCQ---LEITPATSLEALTM 152 (308)
T ss_dssp TEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSEEEEC---SSSCHHHHHHHHHH
T ss_pred ccccccccccccccccceEEEEecCCceEEEeeecchhhhchhhhhh--hhhhcccceEEeec---cccchHHHHHHHHH
Confidence 99999985 45556666666665 67777766655444444333322 22223334444443 24567788888899
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEe
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 243 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit 243 (323)
+++.+..+.+|+...... .........+++..+..|.+........+..+..+....+ .+.+++.+++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~vivT 221 (308)
T d2fv7a1 153 ARRSGVKTLFNPAPAIAD-----LDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVL------LKRGCQVVIIT 221 (308)
T ss_dssp HHHTTCEEEECCCSCCTT-----CCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHH------HTTTCSEEEEE
T ss_pred hhhcCceEEecccchhhh-----hhhhHHhhhhhhhhhHHHHHHhhhhhccchhhhhhHHHHH------HhcCCCEEEEE
Confidence 999999988888653311 1122344578888888888776554333333345555666 56789999999
Q ss_pred eCCCceEEeeCC--eeeEEeceeCCCCcccCCCCcchHHHHHHHHHh--hcCCCHHHHHHHHhHHHHHHhhhcCcc--CC
Q 020650 244 QGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL--VQEKPIEECVRAGCYTSHVIIQRSGCT--YP 317 (323)
Q Consensus 244 ~G~~G~~~~~~~--~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l--~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p 317 (323)
+|++|+++++++ ..+++|+++ ++++||+||||+|+|||++++ .+|+++++|+++|+++|+++|++.|+. +|
T Consensus 222 ~G~~G~~~~~~~~~~~~~~p~~~---v~vvDttGAGDaF~ag~~~~l~~~~~~~~~~a~~~a~~~aa~~v~~~G~~~~~p 298 (308)
T d2fv7a1 222 LGAEGCVVLSQTEPEPKHIPTEK---VKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYP 298 (308)
T ss_dssp CGGGCEEEEESSCCSCEEECCCC---CCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHTSSSGGGGCC
T ss_pred ecccceeeecccccceeeccccc---ccccCCCChhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999754 466666544 479999999999999999977 689999999999999999999999995 59
Q ss_pred CCCCC
Q 020650 318 EKPEF 322 (323)
Q Consensus 318 ~~~~~ 322 (323)
+++|.
T Consensus 299 ~~~ei 303 (308)
T d2fv7a1 299 YKKDL 303 (308)
T ss_dssp CGGGS
T ss_pred CHHHH
Confidence 98875
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=7.8e-40 Score=286.17 Aligned_cols=296 Identities=15% Similarity=0.113 Sum_probs=219.0
Q ss_pred EEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcC
Q 020650 7 LLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAG 86 (323)
Q Consensus 7 i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~g 86 (323)
+.+--|+++|++.++++...+..+......+....+||.+.|+|.++++ +| .++.+++.+|+| .|+.+.+.|++.|
T Consensus 3 ~t~~lnp~iD~~~~v~~l~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~d-~g~~~~~~L~~~~ 78 (319)
T d2ajra1 3 LTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSK-LG--VPSVATGFVGGY-MGKILVEELRKIS 78 (319)
T ss_dssp EEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHH-TT--CCEEEEEEEEHH-HHHHHHHHHHHHC
T ss_pred EEEeCChHHcEEEEECCccCCCceeeeecceeeECCCCHHHHHHHHHHH-CC--CCEEEEEEecCc-cHHHHHHHHHHhC
Confidence 3333478999999999843343444456667788999999999999998 56 999999999965 7999999999877
Q ss_pred ceeEE--eecCCCCceeEEEEEeC-CccceeecccccccCCcccCCC--cchhhhhccccEEEEeccc-cccCHHHHHHH
Q 020650 87 VNVHY--YEDESASTGTCAVCVVG-GERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFF-LTVSPDSIQLV 160 (323)
Q Consensus 87 i~~~~--~~~~~~~t~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~-~~~~~~~~~~~ 160 (323)
++++. +.. +.+|++++.+.+. +++.. ........++..+... ......+..+++++++|.. ..++++.+..+
T Consensus 79 ~~i~~~~i~~-~~~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sGs~~~~~~~~~~~~l 156 (319)
T d2ajra1 79 KLITTNFVYV-EGETRENIEIIDEKNKTIT-AINFPGPDVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNEL 156 (319)
T ss_dssp TTEEEEEEEE-SSCCEEEEEEEETTTTEEE-EEECCCCCCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCTTHHHHH
T ss_pred CCCCceeEec-CCCCceEEEEEECCCCeEE-EEecCCCcCCHHHHHHHHHHHHhhcccccEEEEecCCcccccHHHHHHH
Confidence 66554 433 4568888777763 33332 2222222333333322 1234568899999999854 34567889999
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeC-HHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGN-ETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n-~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
++.++++++++++|+++..+ ..+.+.....+++++| ++|++.+.+....+.++..++++.+ .+.+ +.
T Consensus 157 ~~~a~~~~~~v~~D~s~~~~-----~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~~d~~~~~~~l------~~~~-~~ 224 (319)
T d2ajra1 157 VRLARERGVFVFVEQTPRLL-----ERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKL------AEKS-QV 224 (319)
T ss_dssp HHHHHHTTCEEEEECCHHHH-----HHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHH------HHHS-SE
T ss_pred HHHHHhcCCcccccchhhHH-----HHHhhhcccCcEEeeccHHHHHHHHhhccCCHHHHHHHHhhh------hhhc-ce
Confidence 99999999999999976542 3355567788999998 4677777665444444556666766 4444 56
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhh-cCCCHHHHHHHHhHHHHHHhhhcCccCCC
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECVRAGCYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~-~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~ 318 (323)
+|||+|++|++++.+++.++.++ .++.+++||+||||+|.|||+++++ +|+++++|+++|+++|+.++++.|..+|+
T Consensus 225 vvvt~G~~G~~~~~~~~~~~~~~--~~~~~vvDt~GAGDaf~ag~i~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~ 302 (319)
T d2ajra1 225 SVVSYEVKNDIVATREGVWLIRS--KEEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAATRRKEKYMPD 302 (319)
T ss_dssp EEEEETTTEEEEECSSCEEEEEE--SSCCCGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTSSSCCCCC
T ss_pred eeeecccceeeeeccCCceEecc--cccCCCCCCCChHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 78999999999987776555543 2345899999999999999999976 59999999999999999999999998888
Q ss_pred CCCC
Q 020650 319 KPEF 322 (323)
Q Consensus 319 ~~~~ 322 (323)
.+++
T Consensus 303 ~~~~ 306 (319)
T d2ajra1 303 LEAI 306 (319)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=8.6e-38 Score=271.87 Aligned_cols=287 Identities=20% Similarity=0.205 Sum_probs=211.8
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
||++||++++|++...+ +...+..+...++||.+.|+|.+|++ +| .++.++|.+|+|..|+.+++.|+++
T Consensus 2 ki~~iG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~Nva~~l~~-lG--~~~~~i~~vG~D~~g~~i~~~L~~~ 71 (308)
T d2dcna1 2 KLITLGEILIEFNALSP-------GPLRHVSYFEKHVAGSEANYCVAFIK-QG--NECGIIAKVGDDEFGYNAIEWLRGQ 71 (308)
T ss_dssp EEEEESCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHHHT
T ss_pred EEEEECcceEEEecCCC-------CceeecceeEEecCcHHHHHHHHHHH-CC--CCEEEEEEeCCcccccccccccccc
Confidence 79999999999886543 34566777888999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe----CCcccee-ecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV----GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 159 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 159 (323)
||+++++. .++.+|+.+++..+ ++++..+ ...++...+...+.. ...+...++++.+.+.+...+.....
T Consensus 72 gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (308)
T d2dcna1 72 GVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVD----EEYVKSADLVHSSGITLAISSTAKEA 147 (308)
T ss_dssp TCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCC----HHHHTTCSEEEEEHHHHHSCHHHHHH
T ss_pred cccccceeeeecccceEEEEEeccccccccccceeeeccccccccccccc----ccccccceEEEeeccccccccchhHH
Confidence 99999985 57778888877653 2223333 333444445555443 36678899999988765444333322
Q ss_pred HHHHHHhCCCeEEEe--CCchhHH-HHHHHHHHhhc--CCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc
Q 020650 160 VAEHAAANNKVFMMN--LSAPFIC-EFFKDALEKVL--PYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE 234 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d--~~~~~~~-~~~~~~~~~~l--~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (323)
+ ..+.+.+....++ .+...|. ........+.+ ...+.++.|+++...+.. ..+.+++.+.+ .
T Consensus 148 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l-------~ 214 (308)
T d2dcna1 148 V-YKAFEIASNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----ESDPDKAAKAF-------S 214 (308)
T ss_dssp H-HHHHHHCSSEEEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS-----CCCHHHHHHHH-------T
T ss_pred H-HHHHhhccccccccceeccccchhhhhhhhhhhccccccccccchhhhhhhhcc-----hhhhhhhhhhc-------c
Confidence 3 2333333332233 2222221 11222233332 256778899999988875 45676666655 3
Q ss_pred CCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 235 IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
.+.+.+++|+|++|++++++++.++++++++ +++|++||||+|.|||+++|++|+++++|+++|+++|++++++.|+
T Consensus 215 ~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaf~ag~i~~l~~g~~~~~a~~~a~~~aa~~~~~~G~ 291 (308)
T d2dcna1 215 DYAEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGD 291 (308)
T ss_dssp TTEEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSS
T ss_pred cceeEEeeccccCceeeecCCccccccccee---eecCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCcCCC
Confidence 4688999999999999999999999887654 7999999999999999999999999999999999999999999998
Q ss_pred c--CCCCCCC
Q 020650 315 T--YPEKPEF 322 (323)
Q Consensus 315 ~--~p~~~~~ 322 (323)
. .|+++|+
T Consensus 292 ~~~~p~~~~~ 301 (308)
T d2dcna1 292 QENLPTTKDI 301 (308)
T ss_dssp STTCCCHHHH
T ss_pred CcCCCCHHHH
Confidence 5 5776553
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=3.4e-38 Score=273.74 Aligned_cols=281 Identities=20% Similarity=0.303 Sum_probs=210.9
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|||++++|++..... .....+||.+.|+|.+|++ +| .+|.++|.+|+|.+|+.+++.|++.
T Consensus 2 ki~viG~~~~D~i~~~~~-------------~~~~~~GG~~~NvA~~l~~-lG--~~v~~v~~vG~D~~g~~i~~~L~~~ 65 (304)
T d1tyya_ 2 KVWVIGDASVDLVPEKQN-------------SYLKCPGGASANVGVCVAR-LG--GECGFIGCLGDDDAGRFLRQVFQDN 65 (304)
T ss_dssp CEEEESCCEEEEEECSSS-------------EEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHHHHHTT
T ss_pred eEEEECccEEEEecCCCC-------------eEEEccCcHHHHHHHHHHH-cC--CCEEEEEEecCChHHHHHHHhhhcc
Confidence 799999999999865432 2456799999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEEEe-CCccceeeccccc--ccCCcccCCCcchhhhhccccEEEEecccc--ccCHHHHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAA--NCYKSEHLKKPENWALVEKAKYFYIAGFFL--TVSPDSIQL 159 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~--~~~~~~~~~ 159 (323)
||+++++. .+...++.+.+..+ ++++++....... ..+.+.+... +...+++++.+..+ ..+.+...+
T Consensus 66 gi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (304)
T d1tyya_ 66 GVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLPP------FRQYEWFYFSSIGLTDRPAREACLE 139 (304)
T ss_dssp TEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGCCC------CCTTCEEEEEHHHHSSHHHHHHHHH
T ss_pred ccccccccccccccccceeeEeecccccccceecccccccccchhhhhh------hccceEEEEecccccccchHHHHHH
Confidence 99999985 45555666666554 5777665443322 2334444332 56778888876543 223466778
Q ss_pred HHHHHHhCCCeEEEeCCchh--H--HHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 160 VAEHAAANNKVFMMNLSAPF--I--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~--~--~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
+++.+++.+.++.+|+.... + .......+...+...+....+......... .+....+.+.+ ...
T Consensus 140 ~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~~------~~~ 208 (304)
T d1tyya_ 140 GARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSG-----ASHWQDARYYL------RDL 208 (304)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHC-----CSSGGGGSSTT------GGG
T ss_pred HHHHhhhcCceEeeccccccccccchhhhhhhhhhcccccccccccccccccccc-----cchHHHHHHHH------Hhc
Confidence 88999999999988875321 1 122344455666777888888877665543 23444444444 567
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCC-----HHHHHHHHhHHHHHHhh
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-----IEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~-----~~~a~~~A~~~Aa~~~~ 310 (323)
+++.+++|+|++|++++++++.+++|+++ ++++||+||||+|.|||+++|.+|++ +++|+++|+++|+++|+
T Consensus 209 g~~~vivt~G~~Ga~~~~~~~~~~~p~~~---v~vvdt~GAGDaf~ag~~~~l~~g~~~~~~~l~~al~~a~~~As~~v~ 285 (304)
T d1tyya_ 209 GCDTTIISLGADGALLITAEGEFHFPAPR---VDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVT 285 (304)
T ss_dssp TCSCEEEECGGGCEEEESSSCEEEECCCC---CCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHGGG
T ss_pred ccceeeeecccceeeeeccCCccccCccc---ccCCCCCCchHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999998888654 47999999999999999999999988 78999999999999999
Q ss_pred hcCcc--CCCCCCC
Q 020650 311 RSGCT--YPEKPEF 322 (323)
Q Consensus 311 ~~G~~--~p~~~~~ 322 (323)
+.|+. +|+++|+
T Consensus 286 ~~G~~~~~P~~~ev 299 (304)
T d1tyya_ 286 AKGAMTALPFPDQL 299 (304)
T ss_dssp SSSTTTTCCCHHHH
T ss_pred CCCCCCCCCCHHHH
Confidence 99974 5776654
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.7e-34 Score=247.43 Aligned_cols=270 Identities=17% Similarity=0.164 Sum_probs=194.8
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
..|+++|++.+|++...++ .+..+||++.|+|..+++ +| .++.++|.+|+|..|. .+.|++
T Consensus 7 ~~i~~vg~~~~d~~~~~~~--------------~~~~~GG~~~n~a~~~~~-lG--~~~~~i~~vG~D~~~~--~~~l~~ 67 (288)
T d1vk4a_ 7 HMITFIGHVSKDVNVVDGK--------------REIAYGGGVVMGAITSSL-LG--VKTKVITKCTREDVSK--FSFLRD 67 (288)
T ss_dssp SEEEEECCCEEEEEEETTE--------------EEEEEECHHHHHHHHHHH-TT--CEEEEEEEECTTTGGG--GTTTGG
T ss_pred ceEEEECCceeeEEecCCc--------------EEEecCCHHHHHHHHHHH-cC--CCEEEEEEeCCChHHH--HHHHHH
Confidence 3699999999999887655 677899999999999998 56 9999999999999885 488999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 164 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~ 164 (323)
+||+++++... .+|+...++..++++...........++.+++. ....+++++.+.. ..+....+++.+
T Consensus 68 ~gi~~~~i~~~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~~~~~~ 136 (288)
T d1vk4a_ 68 NGVEVVFLKSP-RTTSIENRYGSDPDTRESFLISAADPFTESDLA-------FIEGEAVHINPLW---YGEFPEDLIPVL 136 (288)
T ss_dssp GTCEEEEEECS-SCEEEEEEC-----CCEEEEEECCCCCCGGGGG-------GCCSSEEEECCSS---TTSSCGGGHHHH
T ss_pred cCCcEEeeccC-CcceEEEEEecCCCeeEEEeehhhhcCChhhhh-------hhccceEEEchhh---hccchHHHHHHH
Confidence 99999998643 445555555555544433333333344444443 3457888887643 223334456666
Q ss_pred HhCCCeEEEeCCchhHH-------HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc
Q 020650 165 AANNKVFMMNLSAPFIC-------EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 165 ~~~~~~~~~d~~~~~~~-------~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
++.+..+.+|+....+. ....+.++++++.+|++++|++|++.+++ ...+++++..+ ...+.
T Consensus 137 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~-----~~~~~~~~~~~------~~~~~ 205 (288)
T d1vk4a_ 137 RRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTG-----TNDLRESCRII------RSFGA 205 (288)
T ss_dssp HHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHS-----CSCHHHHHHHH------HHTTC
T ss_pred HHhCcceeeccccccccccccccccccHHHHHHHHHhCCcccCCHHHHHHHhh-----hhhHHHHHhhh------hcccc
Confidence 77788888887432110 00223367889999999999999999986 35677777776 44454
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhh-cCCCHHHHHHHHhHHHHHHhhhcCccC
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECVRAGCYTSHVIIQRSGCTY 316 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~-~g~~~~~a~~~A~~~Aa~~~~~~G~~~ 316 (323)
. ++++.|..|+.++ ++..++.+. ++.+++|||||||+|.|||+++++ +|+++++|+++|+++|+.++++.|+
T Consensus 206 ~-~v~~~g~~~~~~~-~~~~~~~~~---~~~~vvDttGAGDsF~ag~i~~~l~~g~~~~~a~~~A~~~Aa~~v~~~Gp-- 278 (288)
T d1vk4a_ 206 K-IILATHASGVIVF-DGNFYEASF---RSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGP-- 278 (288)
T ss_dssp S-SEEEEETTEEEEE-SSSEEEEEC---CCSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSS--
T ss_pred e-eeeccccceeecc-ccccccccC---CCCccCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcCCC--
Confidence 4 5556677777765 455666554 455899999999999999999965 7999999999999999999999994
Q ss_pred CCCCCC
Q 020650 317 PEKPEF 322 (323)
Q Consensus 317 p~~~~~ 322 (323)
++++|+
T Consensus 279 ~~~~~~ 284 (288)
T d1vk4a_ 279 LRREDL 284 (288)
T ss_dssp CCGGGG
T ss_pred CCHHHH
Confidence 455543
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=3.2e-16 Score=132.99 Aligned_cols=163 Identities=13% Similarity=0.108 Sum_probs=117.0
Q ss_pred ccccEEEEeccccccCHH---HHHHHHHHHHhC--CCeEEEeCCch------hHH-HHHHHHHHhhcCCCcEEEeCHHHH
Q 020650 138 EKAKYFYIAGFFLTVSPD---SIQLVAEHAAAN--NKVFMMNLSAP------FIC-EFFKDALEKVLPYMDYIFGNETEA 205 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~d~~~~------~~~-~~~~~~~~~~l~~~dvl~~n~~e~ 205 (323)
...|.+.++ +.. +.+ .+.+++++.|+. +.++++||--. ... .......+.+++.+|++.+|..|+
T Consensus 74 ~~~daI~tG-~l~--s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea 150 (288)
T d1vi9a_ 74 HTCDAVLSG-YLG--SAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVEL 150 (288)
T ss_dssp GGCCEEEEC-CCS--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHH
T ss_pred ccCCEEEEe-ccC--ChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHH
Confidence 357777664 332 343 455666655543 46788888321 111 123344567999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCce--------EEeeCCeeeEEeceeCCCCcccCCCCcc
Q 020650 206 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAG 277 (323)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~--------~~~~~~~~~~~~~~~~~~~~~~d~tGAG 277 (323)
+.|++....+.+++.++++++ ...|++.+++|.+..|. +++++++.+++..+.. +....|++|+|
T Consensus 151 ~~L~g~~i~~~~~~~~aa~~L------~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~GtG 223 (288)
T d1vi9a_ 151 EILCEHAVNNVEEAVLAAREL------IAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLV-DFGMRQPVGVG 223 (288)
T ss_dssp HHHHTSCCCSHHHHHHHHHHH------HHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECC-CCTTCCCSCHH
T ss_pred HHhhccccchhHHHHHHHHHH------HhcCCCEEEEEecCccccccCceeEEEEeCCceEEeccccc-ccCCCCCCChh
Confidence 999997666666788888888 77899999999766542 4556666655543322 34678999999
Q ss_pred hHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 278 DAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 278 Daf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
|+|.|+|+++|++|+++++|+++|.+.-...++
T Consensus 224 D~fsa~l~a~l~~G~~l~~A~~~A~~~v~~~l~ 256 (288)
T d1vi9a_ 224 DVTSGLLLVKLLQGATLQEALEHVTAAVYEIMV 256 (288)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887555554
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.50 E-value=3.1e-13 Score=112.54 Aligned_cols=161 Identities=16% Similarity=0.160 Sum_probs=118.9
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCchhH-------HHHHHHHHHhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAPFI-------CEFFKDALEKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~-------~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..|.+.++- .-+.+.+..+.+..++.+ .++++|+-.... ........+.+++.+|++.+|..|++.|++
T Consensus 70 ~~daIkiG~---l~s~~~~~~i~~~l~~~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp~adiiTPN~~Ea~~L~g 146 (258)
T d1ub0a_ 70 PLHAAKTGA---LGDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CccEEEEec---cccchHHHHHHHHHHHhccccceEeeeeecccCccccchhHHHHHHHhhcccceeecCCHHHHhhhcC
Confidence 568888753 235666677777666655 557777733211 122444556799999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc----e-EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP----V-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G----~-~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
....+.+++.++++.| .+.|.+.+++|.|... . .++++++.++...++ ....++.|+||+|.++|+
T Consensus 147 ~~~~~~~d~~~aa~~L------~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~GtGd~~asaia 217 (258)
T d1ub0a_ 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPR---VHTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECC---CCCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCeEEEeccccccccccceeccCCeEEecccce---ecCCCCCChHHHHHHHHH
Confidence 7665556778888888 7789999999975432 2 345677776666433 356788999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
+.|++|.++++|++.|...-...+..
T Consensus 218 ~~La~G~~l~~Av~~A~~~v~~~i~~ 243 (258)
T d1ub0a_ 218 ALLAKGRPLAEAVAEAKAYLTRALKT 243 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987777643
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.38 E-value=9.9e-13 Score=112.09 Aligned_cols=159 Identities=16% Similarity=0.192 Sum_probs=104.8
Q ss_pred hccccEEEEeccccccCHHH---HHHHHHHHHhC--CCeEEEeCCch---------hHHHHHHHHHH-hhcCCCcEEEeC
Q 020650 137 VEKAKYFYIAGFFLTVSPDS---IQLVAEHAAAN--NKVFMMNLSAP---------FICEFFKDALE-KVLPYMDYIFGN 201 (323)
Q Consensus 137 ~~~~~~v~i~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~d~~~~---------~~~~~~~~~~~-~~l~~~dvl~~n 201 (323)
+...|.+.+ |+. -+.+. +.++++..+.. +.++++||--- ...+...+.++ .+++.+|++.+|
T Consensus 71 l~~~daI~t-G~l--~s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Llp~adiITPN 147 (309)
T d1lhpa_ 71 VNQYDYVLT-GYT--RDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVPVADIITPN 147 (309)
T ss_dssp CCCCSEEEE-CCC--CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTGGGCSEECCC
T ss_pred ccccCeeee-ccc--CCHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhcCcCcEEecc
Confidence 345788766 432 23444 44444444432 45678888421 11223344454 589999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC------ceEEeeC---------C---eeeEEece
Q 020650 202 ETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD------PVVVAQD---------G---KLKKFPVI 263 (323)
Q Consensus 202 ~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~------G~~~~~~---------~---~~~~~~~~ 263 (323)
..|++.|++....+.+++.++++.| .+.|++.++||.|.. ..++... . +.++++.
T Consensus 148 ~~Ea~~Ltg~~~~~~~~~~~aa~~L------~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 220 (309)
T d1lhpa_ 148 QFEAELLTGRKIHSQEEALEVMDML------HSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEM- 220 (309)
T ss_dssp HHHHHHHHTCCCCSHHHHHHHHHHH------HHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEE-
T ss_pred HHHHhHHhccccCCHHHHHHHHHHH------HhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEee-
Confidence 9999999997666666788889988 677999999997642 2222111 0 0112222
Q ss_pred eCCCCcccCCCCcchHHHHHHHHHhhcC-CCHHHHHHHHhHHHHHH
Q 020650 264 VLPKDKLVDTNGAGDAFVGGFLSQLVQE-KPIEECVRAGCYTSHVI 308 (323)
Q Consensus 264 ~~~~~~~~d~tGAGDaf~ag~~~~l~~g-~~~~~a~~~A~~~Aa~~ 308 (323)
|. -..+++|+||+|.|+|++.+++| .++++|++.|.+.=...
T Consensus 221 --~~-i~~~~~GtGD~fsa~l~a~l~~g~~~L~~A~~~A~~~v~~~ 263 (309)
T d1lhpa_ 221 --HK-VDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHV 263 (309)
T ss_dssp --EC-CSSCCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred --cc-cCCCCCcccHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 22 23577999999999999999987 58999999998764433
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.37 E-value=6e-12 Score=104.94 Aligned_cols=161 Identities=12% Similarity=0.098 Sum_probs=111.8
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCchh------HHHH-HHHHHHhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAPF------ICEF-FKDALEKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~------~~~~-~~~~~~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.+.++- .-+.+.+..+.+..++.+ .++++|+-... .... .....+.+++.+|++.+|..|++.|.+
T Consensus 72 ~~~aIkiG~---l~s~~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp~adviTPN~~Ea~~Ll~ 148 (266)
T d1jxha_ 72 RIDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 148 (266)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred cCceEEEcc---cchHHHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhhhhhheecCCHHHHHHHhc
Confidence 567777753 235677777777777765 45777773211 1122 333345789999999999999998876
Q ss_pred hcCC-CCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-----eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHH
Q 020650 211 VQGW-ETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 284 (323)
Q Consensus 211 ~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-----~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~ 284 (323)
.... +.++.+++++.+ .+.|++.|++|.|... .+++++++.+....+ +....++.|.||+|.+++
T Consensus 149 ~~~~~~~~~~~~aa~~l------~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~hGTGc~lasai 219 (266)
T d1jxha_ 149 APHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAP---RVNTKNTHGTGCTLSAAL 219 (266)
T ss_dssp CCCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC------CCCCSCCBTHHHHHHHHH
T ss_pred CCcccChHHHHHHHHHH------HhcCCceEEEeccccCCCcceEEEEcCCceEEEeec---cccCCCCCCchHHHHHHH
Confidence 4322 233566778888 7789999999966533 245556655554432 335567889999999999
Q ss_pred HHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 285 LSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 285 ~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
++.|++|+++++|++.|...-...+..
T Consensus 220 aa~La~G~~l~~Av~~A~~~v~~~i~~ 246 (266)
T d1jxha_ 220 AALRPRHRSWGETVNEAKAWLSAALAQ 246 (266)
T ss_dssp HHHGGGSSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988888754
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=98.76 E-value=6.8e-08 Score=79.36 Aligned_cols=159 Identities=14% Similarity=0.080 Sum_probs=101.1
Q ss_pred hhhhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEART 207 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~ 207 (323)
..+..+.++.++++.-+ ... +.....++.+++.+.|+++||..........+..+++++ +.+++.+|..|+..
T Consensus 52 ~~e~~~~a~alviN~Gt--l~~~~~~~m~~a~~~a~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~tVI~gN~~Ei~~ 129 (269)
T d1ekqa_ 52 VADMAKIAGALVLNIGT--LSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAH 129 (269)
T ss_dssp HHHHHHHSSEEEEECTT--CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHH
T ss_pred HHHHHHhccceEEecCC--CCHHHHHHHHHHHHHHHHcCCCEEECCcCCCCchhHHHHHHHHHHhCCCceEcCCHHHHHH
Confidence 45667788999886422 233 345556678889999999998542222223343445543 56899999999999
Q ss_pred HHhhcC-----CC----CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcch
Q 020650 208 FSKVQG-----WE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 278 (323)
Q Consensus 208 l~~~~~-----~~----~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGD 278 (323)
|.+... .+ .++..++++.+ .+.....+++| |+. -++.++++.+.+..-. ...-..+|.||
T Consensus 130 L~g~~~~~~~gvd~~~~~~d~~~~A~~l------a~~~~~vVvlk-G~~-D~I~dg~~~~~~~~G~---~~m~~itGtGc 198 (269)
T d1ekqa_ 130 TVGVTDWLIKGVDAGEGGGDIIRLAQQA------AQKLNTVIAIT-GEV-DVIADTSHVYTLHNGH---KLLTKVTGAGC 198 (269)
T ss_dssp HCC---------------HHHHHHHHHH------HHHHTSEEEEC-SSS-EEEECSSCEEEECCCC---GGGGGSTTHHH
T ss_pred HhCCccCCcCCcCCcccHHHHHHHHHHH------HHhcCCEEEec-CCc-eEEEeCCeeEEecCCC---hhhccCCcchH
Confidence 976431 11 13345566666 33334456666 443 3455666666654321 13344589999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 279 AFVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 279 af~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
++.+.+.+.+..+.++.+|+..|...
T Consensus 199 ~Ls~~iaa~la~~~~~~~A~~~A~~~ 224 (269)
T d1ekqa_ 199 LLTSVVGAFCAVEENPLFAAIAAISS 224 (269)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999988877655
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.39 E-value=3.5e-06 Score=68.77 Aligned_cols=158 Identities=14% Similarity=0.037 Sum_probs=94.0
Q ss_pred hhhhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTF 208 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l 208 (323)
..+..+.++.++++--+ ++. +.....++.+++.++|+++||..........+..++++ ...+++.+|..|+..|
T Consensus 50 ~~e~~~~a~al~iN~Gt--l~~~~~~~m~~a~~~A~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~vItgN~~Ei~~L 127 (264)
T d1v8aa_ 50 LEEMIRLADAVVINIGT--LDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (264)
T ss_dssp HHHHHHHCSEEEEECTT--CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHhcCceEeeCCC--CCHHHHHHHHHHHHHHHHcCCCEEEcCcccCcchhHHHHHHHHhccCCcEEcCCHHHHHHH
Confidence 45666778888886422 233 44556667888899999999844221111222233332 3679999999999999
Q ss_pred HhhcCCC---------CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 209 SKVQGWE---------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 209 ~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
.+..... .++..++++.+ .......+++| |+.- ++.++++.+.++.-.. ..-..+|.||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~d~~~~a~~l------A~~~~~vVvlk-G~~D-~I~dg~~~~~~~~G~~---~m~~itGtGc~ 196 (264)
T d1v8aa_ 128 LGEEGKTRGVDSLEYGEEEAKKLTMNA------AREFNTTVAVT-GAVD-YVSDGRRTFAVYNGHE---LLGRVTGTGCM 196 (264)
T ss_dssp HHHHC----------CHHHHHHHHHHH------HHHTTSEEEEE-SSSE-EEECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCcccCCCCCCcccccHHHHHHHHHHH------HHHhCCEEEec-CCee-EEEcCCEEEEeCCCCc---hhccCCcccHH
Confidence 8754221 12344566666 33323445555 6544 4556666766653211 33446899999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
+.+.+...+..+ ++.+|+..|...
T Consensus 197 Ls~~iaa~la~~-~~~~Aa~~A~~~ 220 (264)
T d1v8aa_ 197 VAALTGAFVAVT-EPLKATTSALVT 220 (264)
T ss_dssp HHHHHHHHHTTS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CHHHHHHHHHHH
Confidence 777666666666 555665555543
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=98.05 E-value=5.8e-06 Score=68.06 Aligned_cols=147 Identities=16% Similarity=0.135 Sum_probs=92.9
Q ss_pred ccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCC-C
Q 020650 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE-T 216 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~-~ 216 (323)
+..|.+.+++ .+.. .+...++++.+.+.+.++++|...-.+. .....+...|+.||..|+..|++....+ .
T Consensus 93 ~~~~~~~iGp-Glg~-~~~~~~~~~~l~~~~~p~VlDAdal~~~------~~~~~~~~~IiTPH~gE~~rL~g~~~~~~~ 164 (275)
T d1kyha_ 93 ETYRAIAIGP-GLPQ-TESVQQAVDHVLTADCPVILDAGALAKR------TYPKREGPVILTPHPGEFFRMTGVPVNELQ 164 (275)
T ss_dssp SCCSEEEECT-TCCS-SHHHHHHHHHHTTSSSCEEECGGGCCSC------CCCCCSSCEEECCCHHHHHHHHCCCHHHHT
T ss_pred hccceEEEec-cccc-hHHHHHHHHHHhhccCceeehhhhhhhh------hcccccCceEecccHHHHHHhcCcccchhh
Confidence 4678888764 2222 3455667777777788899998643210 1122344567779999999998632211 2
Q ss_pred CCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHH
Q 020650 217 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 296 (323)
Q Consensus 217 ~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~ 296 (323)
++..++++.+. +.... +++-.|....+...+++.+ +.... .....+.|.||++.+.+...+.+|.++.+
T Consensus 165 ~~~~~~a~~~~------~~~~~-~vllKG~~t~I~~~~g~~~-~~~~g---~~~lat~GsGDvLaGiIa~~lAq~~~~~~ 233 (275)
T d1kyha_ 165 KKRAEYAKEWA------AQLQT-VIVLKGNQTVIAFPDGDCW-LNPTG---NGALAKGGTGDTLTGMILGMLCCHEDPKH 233 (275)
T ss_dssp TSHHHHHHHHH------HHHTS-EEEECSTTCEEECTTSCEE-ECCCC---CGGGCSTTHHHHHHHHHHHHHHHCSSHHH
T ss_pred ccHHHHHHHHH------HHhCC-eEEeccCcceEEcCCCcee-ecCCC---CccccCCccccHHHHHHHHHHHcCCCHHH
Confidence 34556666662 22223 4444465554443233444 33222 24578899999999999999999999999
Q ss_pred HHHHHhH
Q 020650 297 CVRAGCY 303 (323)
Q Consensus 297 a~~~A~~ 303 (323)
|+..|+.
T Consensus 234 Aa~~a~~ 240 (275)
T d1kyha_ 234 AVLNAVY 240 (275)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999954
|
| >d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-specific phosphofructokinase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.96 E-value=0.0002 Score=62.34 Aligned_cols=75 Identities=12% Similarity=0.079 Sum_probs=51.3
Q ss_pred cccEEEEecccccc----CH----HH---HHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHH
Q 020650 139 KAKYFYIAGFFLTV----SP----DS---IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEART 207 (323)
Q Consensus 139 ~~~~v~i~~~~~~~----~~----~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~ 207 (323)
+.|+++++|+.... .. +. +.+.+...+..++++=+.+.+..-.......+..+++++|-+=+|++|+..
T Consensus 214 ~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~~~~l~~~~~~~i~iHlElAs~~d~~l~~~i~~~ilp~vDSlGmNEqEL~~ 293 (450)
T d1u2xa_ 214 EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQ 293 (450)
T ss_dssp TCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCHHHHHHHHHHHGGGSSEEEEEHHHHHH
T ss_pred CCCEEEEechhhhhccccCchhHHHHHHHHHHHHHhCCCCCCeEEEEecccchHHHHHHHHHHhccccccCCCCHHHHHH
Confidence 57999999998531 11 12 223333445567888888866443344566677899999999999999988
Q ss_pred HHhhcC
Q 020650 208 FSKVQG 213 (323)
Q Consensus 208 l~~~~~ 213 (323)
+....+
T Consensus 294 l~~~lg 299 (450)
T d1u2xa_ 294 ILSVLG 299 (450)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 876443
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.94 E-value=3.1e-05 Score=63.75 Aligned_cols=159 Identities=14% Similarity=0.055 Sum_probs=93.7
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
+..+..+.+.+++ .+....+....+.+.......++++|...-.+. ... .....+...|+.|+..|++.|++....
T Consensus 93 ~~~~~~~a~~iGp-Glg~~~~~~~~~~~~~~~~~~~~vldadal~~~--~~~-~l~~~~~~~IlTPH~gE~~rL~~~~~~ 168 (278)
T d2ax3a1 93 ELSKDVDVVAIGP-GLGNNEHVREFVNEFLKTLEKPAVIDADAINVL--DTS-VLKERKSPAVLTPHPGEMARLVKKTVG 168 (278)
T ss_dssp HHHHTCSEEEECT-TCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTC--CHH-HHHTCSSCEEECCCHHHHHHHHTCCHH
T ss_pred HhcccCCEEEecC-CcccchHHHHHHHHHHhccchheecchhhhhhh--hhh-hhhhcCCCEEeCCCHhHHHHHhhcccc
Confidence 4456788888865 334445554445555566677887876432211 111 112223445667999999999874322
Q ss_pred CCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCH
Q 020650 215 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 294 (323)
Q Consensus 215 ~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~ 294 (323)
+.++..+.++.+. ...++ +++-.|.. .++.++++.+..+. . .....+.|.||+..+-+...|.++.++
T Consensus 169 ~~~~~~~~a~~~a-----~~~~~--~vvlKG~~-t~i~~~~~~~~~~~-g---~~~la~~GtGDvLaGiIaallAq~~~~ 236 (278)
T d2ax3a1 169 DVKYNYELAEEFA-----KENDC--VLVLKSAT-TIVTDGEKTLFNIT-G---NTGLSKGGSGDVLTGMIAGFIAQGLSP 236 (278)
T ss_dssp HHTTCHHHHHHHH-----HHHTS--EEEECSSS-EEEECSSCEEEECC-C---C-CCSSTTHHHHHHHHHHHHHHTTCCH
T ss_pred hhhhHHHHHHHHH-----HHcCC--cEEecCcc-ccccCcccceeecC-C---CCccccccchhHHHHHHHHHHHcCCCH
Confidence 2223334455442 11222 33333443 34455555554432 1 245688999999999888888999999
Q ss_pred HHHHHHHhHHHHHHh
Q 020650 295 EECVRAGCYTSHVII 309 (323)
Q Consensus 295 ~~a~~~A~~~Aa~~~ 309 (323)
.+|+..|+.+-+.+.
T Consensus 237 ~~A~~~a~~lhg~aa 251 (278)
T d2ax3a1 237 LEASTVSVYLHGFAA 251 (278)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999966555443
|
| >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.60 E-value=0.00043 Score=60.21 Aligned_cols=74 Identities=11% Similarity=0.078 Sum_probs=50.2
Q ss_pred ccccEEEEeccccccC---H---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 138 EKAKYFYIAGFFLTVS---P---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
...|+++++|+.+.-. . +...+.+...++.++++=+.+.+.. .+.....+.++++++|-+=+|++|+..+...
T Consensus 223 ~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~~~i~IH~ElAs~~-d~~l~~~i~~vlp~vDSlGmNEqEL~~l~~~ 301 (454)
T d1ua4a_ 223 KNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFTP-DEKVREEILNVLGMFYSVGLNEVELASIMEI 301 (454)
T ss_dssp GGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCCC-CHHHHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEEccccccchhhHHHHHHHHHHHHhcCccCCceEEEecccc-HHHHHHHHHHhCCcCCcCCCCHHHHHHHHHH
Confidence 3689999999874211 1 2233344445567788888886432 3335555667999999999999999988554
Q ss_pred c
Q 020650 212 Q 212 (323)
Q Consensus 212 ~ 212 (323)
.
T Consensus 302 l 302 (454)
T d1ua4a_ 302 L 302 (454)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.50 E-value=0.0021 Score=55.93 Aligned_cols=170 Identities=12% Similarity=-0.053 Sum_probs=90.9
Q ss_pred cCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEeecC--------------CCCce
Q 020650 35 KYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--------------SASTG 100 (323)
Q Consensus 35 ~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--------------~~~t~ 100 (323)
........||.+..+|..|++ ++ +.+|...++++.... .+.+.+..+ -+.... +.+..
T Consensus 111 ~~~~~~rmGGnAgimAn~La~-l~-~~~vi~~~p~~~k~q----~~lf~~~~i--~~P~v~~~~~~l~~p~e~~~~e~d~ 182 (467)
T d1gc5a_ 111 WGWDELRIGGQAGIMANLLGG-VY-RIPTIVHVPQNPKLQ----AELFVDGPI--YVPVFEGNKLKLVHPKDAIAEEEEL 182 (467)
T ss_dssp HCCSEEEEESHHHHHHHHHHH-TS-CCCEEECCSCCCHHH----HTTSCSSSE--EEEEECSSCEEEECGGGSCCSCCCC
T ss_pred hcchhcccCCHHHHHHHHHHh-cC-CceEEEecCcchHHH----HHHhcCCCc--ccceecCCceeecCchhhccCCCCc
Confidence 345567889999999999988 33 366766676665322 233332211 111111 11122
Q ss_pred -eEEEEEeCCccce-eecccccccCC-----cccCCC-cchhhhh----ccccEEEEeccccccC----H-------HHH
Q 020650 101 -TCAVCVVGGERSL-VANLSAANCYK-----SEHLKK-PENWALV----EKAKYFYIAGFFLTVS----P-------DSI 157 (323)
Q Consensus 101 -~~~~~~~~g~~~~-~~~~~~~~~~~-----~~~~~~-~~~~~~~----~~~~~v~i~~~~~~~~----~-------~~~ 157 (323)
..++.+..|+..- +..+.+++-+- ...+.. +++.+.+ ...|+++++|+.+.-. . +.+
T Consensus 183 IHlIlEY~~G~~wg~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~ 262 (467)
T d1gc5a_ 183 IHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRV 262 (467)
T ss_dssp EEEEEEECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHH
T ss_pred eEEEEEeCCCCeecceecCCCCeEEEeCCCCCccCcccHHHHHHHHhhccCCCEEEEEchhhccccCCCchhHHHHHHHH
Confidence 2333344454311 12222222111 111111 2233333 3689999999975321 1 123
Q ss_pred HHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 158 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
...+...++.++++=+.+.+.. .+.....+.++++++|-+=+|++|+..+....+
T Consensus 263 ~~~l~~l~~~~i~iH~ElAs~~-d~~l~~~i~~ilp~vDSlGmNEqEL~~l~~~lg 317 (467)
T d1gc5a_ 263 ESHLNILNRYNVKSHFEFAYTA-NRRVREALVELLPKFTSVGLNEVELASIMEIIG 317 (467)
T ss_dssp HHHHHHHHHTTCEEEEECCCCC-CHHHHHHHHHHGGGCSEEEECHHHHHHHHHHTT
T ss_pred HHHHHhcCcCCCceEEEecchh-hHHHHHHHHHhccccccCCCCHHHHHHHHHhcC
Confidence 3444444567788878876432 334455566789999999999999988765443
|
| >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=96.63 E-value=0.008 Score=52.01 Aligned_cols=74 Identities=12% Similarity=0.028 Sum_probs=50.3
Q ss_pred ccccEEEEeccccccC---H---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 138 EKAKYFYIAGFFLTVS---P---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
.+.|+++++|+.+.-. . +.+.+.++..+..++++=+.+.+.. .+.....+.++++++|-+=+|++|+..+...
T Consensus 221 ~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~~~~~i~iH~ElAs~~-d~~~~~~l~~vlp~vdSlGmNEqEL~~l~~~ 299 (451)
T d1l2la_ 221 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTP-DEVVRLEIVKLLKHFYSVGLNEVELASVVSV 299 (451)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCS-SHHHHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEecccccccccchHHHHHHHHHHHhcCCcCCcEEEEeccch-HHHHHHHHHHhcccCccCCcCHHHHHHHHHH
Confidence 3689999999885311 1 2233444455667888878876432 2334555667999999999999999877644
Q ss_pred c
Q 020650 212 Q 212 (323)
Q Consensus 212 ~ 212 (323)
.
T Consensus 300 l 300 (451)
T d1l2la_ 300 M 300 (451)
T ss_dssp T
T ss_pred h
Confidence 3
|